Query 009316
Match_columns 537
No_of_seqs 408 out of 3674
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 23:45:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009316.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009316hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jrx_A Acetyl-COA carboxylase 100.0 1.8E-93 6.2E-98 779.6 46.3 452 65-520 50-562 (587)
2 3glk_A Acetyl-COA carboxylase 100.0 1.1E-91 3.9E-96 763.0 41.8 445 65-513 34-539 (540)
3 3u9t_A MCC alpha, methylcroton 100.0 1.6E-91 5.4E-96 780.2 38.0 452 69-520 26-478 (675)
4 3n6r_A Propionyl-COA carboxyla 100.0 6E-92 2.1E-96 784.3 28.9 449 70-518 1-469 (681)
5 3ouz_A Biotin carboxylase; str 100.0 8.4E-87 2.9E-91 713.6 52.8 445 67-513 2-446 (446)
6 3hbl_A Pyruvate carboxylase; T 100.0 8.1E-85 2.8E-89 759.1 37.3 449 69-518 2-458 (1150)
7 3va7_A KLLA0E08119P; carboxyla 100.0 4.1E-81 1.4E-85 729.2 40.8 444 68-514 28-472 (1236)
8 2qf7_A Pyruvate carboxylase pr 100.0 4.4E-79 1.5E-83 712.6 41.4 448 70-517 13-475 (1165)
9 2vpq_A Acetyl-COA carboxylase; 100.0 5.2E-76 1.8E-80 630.8 50.1 447 71-517 1-448 (451)
10 1ulz_A Pyruvate carboxylase N- 100.0 1E-75 3.5E-80 628.5 48.9 447 70-517 1-447 (451)
11 2dzd_A Pyruvate carboxylase; b 100.0 5.3E-75 1.8E-79 624.7 50.3 449 66-515 1-457 (461)
12 1w96_A ACC, acetyl-coenzyme A 100.0 6.9E-75 2.3E-79 636.7 48.2 444 66-513 42-553 (554)
13 2w70_A Biotin carboxylase; lig 100.0 4.1E-74 1.4E-78 615.7 49.3 443 70-514 1-444 (449)
14 4dim_A Phosphoribosylglycinami 100.0 8.3E-56 2.8E-60 467.1 42.9 386 69-482 5-401 (403)
15 3vot_A L-amino acid ligase, BL 100.0 5.5E-51 1.9E-55 433.5 38.6 388 71-483 5-415 (425)
16 1a9x_A Carbamoyl phosphate syn 100.0 2.2E-50 7.5E-55 471.5 38.1 412 70-513 6-466 (1073)
17 4ffl_A PYLC; amino acid, biosy 100.0 1.6E-50 5.6E-55 421.0 32.9 356 71-482 1-358 (363)
18 1kjq_A GART 2, phosphoribosylg 100.0 1E-48 3.5E-53 411.1 42.6 380 70-483 10-391 (391)
19 2dwc_A PH0318, 433AA long hypo 100.0 3.2E-48 1.1E-52 413.1 43.3 390 71-487 19-419 (433)
20 4e4t_A Phosphoribosylaminoimid 100.0 6.9E-48 2.3E-52 408.4 40.2 376 69-481 33-416 (419)
21 3aw8_A PURK, phosphoribosylami 100.0 1.8E-47 6E-52 399.0 40.8 360 73-480 1-361 (369)
22 3k5i_A Phosphoribosyl-aminoimi 100.0 1.8E-46 6.2E-51 395.9 42.1 370 71-479 24-398 (403)
23 3ax6_A Phosphoribosylaminoimid 100.0 2E-45 6.8E-50 385.0 40.5 369 71-484 1-373 (380)
24 3vmm_A Alanine-anticapsin liga 100.0 3.1E-45 1.1E-49 393.4 34.3 376 95-483 52-468 (474)
25 3q2o_A Phosphoribosylaminoimid 100.0 6.2E-44 2.1E-48 375.0 42.8 363 70-476 13-376 (389)
26 2yw2_A Phosphoribosylamine--gl 100.0 1.4E-44 4.9E-49 383.9 34.7 378 72-485 1-409 (424)
27 3eth_A Phosphoribosylaminoimid 100.0 2.9E-44 9.8E-49 371.7 35.5 337 71-480 1-340 (355)
28 2z04_A Phosphoribosylaminoimid 100.0 9.4E-45 3.2E-49 377.8 31.6 362 71-487 1-363 (365)
29 2qk4_A Trifunctional purine bi 100.0 8.7E-45 3E-49 388.8 30.3 392 66-485 19-438 (452)
30 2ip4_A PURD, phosphoribosylami 100.0 2.3E-43 7.8E-48 373.9 40.2 372 72-485 1-402 (417)
31 3orq_A N5-carboxyaminoimidazol 100.0 1.7E-43 5.7E-48 370.2 35.9 361 70-475 11-372 (377)
32 1vkz_A Phosphoribosylamine--gl 100.0 1.8E-43 6.2E-48 374.2 31.8 372 69-485 13-405 (412)
33 2yrx_A Phosphoribosylglycinami 100.0 9.8E-42 3.4E-46 365.0 38.4 381 65-484 15-427 (451)
34 3lp8_A Phosphoribosylamine-gly 100.0 2.6E-41 8.8E-46 360.5 40.1 388 69-484 19-431 (442)
35 3mjf_A Phosphoribosylamine--gl 100.0 1.1E-40 3.6E-45 354.8 40.5 386 71-485 3-417 (431)
36 2xcl_A Phosphoribosylamine--gl 100.0 2.3E-41 8E-46 358.9 33.9 378 72-485 1-407 (422)
37 1a9x_A Carbamoyl phosphate syn 100.0 7.1E-39 2.4E-43 374.4 39.4 321 70-409 558-895 (1073)
38 2pn1_A Carbamoylphosphate synt 100.0 6.4E-37 2.2E-41 314.0 30.9 294 69-392 2-301 (331)
39 4fu0_A D-alanine--D-alanine li 100.0 5.2E-38 1.8E-42 326.2 20.1 301 71-383 3-342 (357)
40 4eg0_A D-alanine--D-alanine li 100.0 3.5E-35 1.2E-39 299.9 25.9 277 69-385 11-311 (317)
41 3e5n_A D-alanine-D-alanine lig 100.0 1.1E-35 3.9E-40 311.4 22.4 303 69-384 20-365 (386)
42 1ehi_A LMDDL2, D-alanine:D-lac 100.0 2.8E-34 9.5E-39 300.2 32.4 302 71-387 3-353 (377)
43 3i12_A D-alanine-D-alanine lig 100.0 1.3E-34 4.3E-39 301.4 28.2 233 142-384 97-346 (364)
44 2i87_A D-alanine-D-alanine lig 100.0 1.7E-35 5.9E-40 308.0 20.4 299 71-383 3-336 (364)
45 3k3p_A D-alanine--D-alanine li 100.0 1.7E-34 5.7E-39 301.8 26.6 298 72-384 38-367 (383)
46 1iow_A DD-ligase, DDLB, D-ALA\ 100.0 6.5E-34 2.2E-38 288.0 28.5 274 70-386 1-303 (306)
47 3tqt_A D-alanine--D-alanine li 100.0 2.5E-33 8.5E-38 292.0 26.4 300 72-384 5-347 (372)
48 3r5x_A D-alanine--D-alanine li 100.0 2E-33 6.9E-38 285.1 24.2 271 72-385 4-295 (307)
49 1e4e_A Vancomycin/teicoplanin 100.0 8.2E-34 2.8E-38 292.9 20.7 297 71-385 3-337 (343)
50 3lwb_A D-alanine--D-alanine li 100.0 1.6E-33 5.5E-38 293.8 21.6 234 143-387 109-367 (373)
51 3se7_A VANA; alpha-beta struct 100.0 1.6E-33 5.5E-38 291.2 21.2 299 72-384 4-336 (346)
52 2fb9_A D-alanine:D-alanine lig 100.0 7E-33 2.4E-37 283.6 23.0 290 70-385 2-317 (322)
53 1uc8_A LYSX, lysine biosynthes 100.0 3.2E-31 1.1E-35 264.4 22.6 272 74-388 2-278 (280)
54 2pvp_A D-alanine-D-alanine lig 100.0 2.1E-31 7.2E-36 277.1 21.1 230 143-390 107-349 (367)
55 2r85_A PURP protein PF1517; AT 100.0 5.1E-29 1.7E-33 255.1 28.3 264 71-365 2-291 (334)
56 2r7k_A 5-formaminoimidazole-4- 100.0 5.3E-28 1.8E-32 250.0 28.2 268 72-369 19-322 (361)
57 2pbz_A Hypothetical protein; N 99.9 1.3E-27 4.4E-32 242.7 12.4 264 72-381 3-294 (320)
58 3df7_A Putative ATP-grAsp supe 99.9 5.5E-26 1.9E-30 230.6 22.4 210 132-384 60-271 (305)
59 1gsa_A Glutathione synthetase; 99.9 5E-23 1.7E-27 208.4 20.1 288 72-388 2-312 (316)
60 1z2n_X Inositol 1,3,4-trisphos 99.9 8.1E-22 2.8E-26 201.1 17.8 242 71-365 11-302 (324)
61 3ln7_A Glutathione biosynthesi 99.9 1.4E-22 4.9E-27 226.4 12.0 240 130-387 433-754 (757)
62 3ln6_A Glutathione biosynthesi 99.8 1.1E-20 3.6E-25 211.8 12.3 241 131-386 429-747 (750)
63 1wr2_A Hypothetical protein PH 99.8 3.5E-20 1.2E-24 181.1 13.0 177 182-363 19-218 (238)
64 1i7n_A Synapsin II; synapse, p 99.8 1.8E-18 6.1E-23 174.3 20.3 219 143-385 68-303 (309)
65 2p0a_A Synapsin-3, synapsin II 99.8 2.7E-18 9.1E-23 175.0 21.0 221 143-387 85-322 (344)
66 1pk8_A RAT synapsin I; ATP bin 99.8 3.9E-18 1.3E-22 176.7 21.7 219 143-385 180-415 (422)
67 2q7d_A Inositol-tetrakisphosph 99.7 5.6E-17 1.9E-21 166.7 17.5 227 82-363 34-312 (346)
68 2cqy_A Propionyl-COA carboxyla 99.7 4.4E-18 1.5E-22 144.8 3.4 104 180-283 4-107 (108)
69 2fp4_B Succinyl-COA ligase [GD 99.5 1.4E-14 4.9E-19 150.8 8.7 169 184-363 4-210 (395)
70 3t7a_A Inositol pyrophosphate 99.5 9.3E-15 3.2E-19 143.8 6.2 202 144-365 58-293 (330)
71 2nu8_B SCS-beta, succinyl-COA 99.5 1.8E-14 6.1E-19 149.9 8.6 171 183-364 3-204 (388)
72 3ufx_B Succinyl-COA synthetase 99.2 8.4E-11 2.9E-15 122.6 14.0 109 184-294 4-118 (397)
73 3tig_A TTL protein; ATP-grAsp, 98.0 0.0002 6.8E-09 73.5 17.8 158 220-391 146-363 (380)
74 3mwd_A ATP-citrate synthase; A 97.4 0.00022 7.4E-09 74.5 6.8 108 185-294 8-135 (425)
75 3pff_A ATP-citrate synthase; p 97.1 0.00038 1.3E-08 78.1 6.1 108 185-294 8-135 (829)
76 3ic5_A Putative saccharopine d 96.3 0.013 4.5E-07 48.7 8.4 94 70-173 4-98 (118)
77 3i6i_A Putative leucoanthocyan 96.3 0.064 2.2E-06 53.8 14.7 94 71-171 10-114 (346)
78 3llv_A Exopolyphosphatase-rela 96.1 0.0083 2.8E-07 52.2 6.0 91 70-168 5-95 (141)
79 3fwz_A Inner membrane protein 95.9 0.007 2.4E-07 52.9 4.8 118 68-199 4-121 (140)
80 2hmt_A YUAA protein; RCK, KTN, 95.4 0.029 1E-06 48.2 6.9 91 70-168 5-96 (144)
81 2r6j_A Eugenol synthase 1; phe 95.2 0.18 6E-06 49.8 12.8 121 70-199 10-150 (318)
82 1hdo_A Biliverdin IX beta redu 95.2 0.25 8.5E-06 44.9 13.0 73 72-153 4-77 (206)
83 3ff4_A Uncharacterized protein 95.2 0.15 5E-06 43.6 10.3 99 71-177 4-114 (122)
84 3r6d_A NAD-dependent epimerase 95.0 0.15 5E-06 47.5 10.9 92 69-169 3-100 (221)
85 2duw_A Putative COA-binding pr 94.9 0.19 6.6E-06 44.1 10.7 100 72-179 14-128 (145)
86 3nkl_A UDP-D-quinovosamine 4-d 94.8 0.12 4.2E-06 44.5 9.0 95 71-177 4-102 (141)
87 2d59_A Hypothetical protein PH 94.6 0.23 7.9E-06 43.5 10.5 100 72-179 23-135 (144)
88 1y81_A Conserved hypothetical 94.5 0.25 8.7E-06 42.9 10.4 102 71-180 14-128 (138)
89 2g1u_A Hypothetical protein TM 94.2 0.22 7.5E-06 43.8 9.5 88 71-166 19-107 (155)
90 1iuk_A Hypothetical protein TT 94.0 0.16 5.3E-06 44.4 8.0 102 71-180 13-129 (140)
91 1qyc_A Phenylcoumaran benzylic 94.0 0.41 1.4E-05 46.7 12.0 91 71-170 4-107 (308)
92 3slg_A PBGP3 protein; structur 93.9 0.2 6.7E-06 50.6 9.7 76 66-149 19-97 (372)
93 3c1o_A Eugenol synthase; pheny 93.9 1.1 3.6E-05 44.0 14.8 122 70-200 3-149 (321)
94 2gas_A Isoflavone reductase; N 93.8 0.41 1.4E-05 46.6 11.6 119 71-199 2-147 (307)
95 3qvo_A NMRA family protein; st 93.8 0.22 7.5E-06 46.9 9.3 77 67-152 19-97 (236)
96 3l9w_A Glutathione-regulated p 93.7 0.029 9.8E-07 58.4 3.0 114 72-199 5-118 (413)
97 1qyd_A Pinoresinol-lariciresin 93.5 0.61 2.1E-05 45.6 12.2 120 71-199 4-152 (313)
98 3l4b_C TRKA K+ channel protien 93.4 0.12 4.1E-06 48.4 6.4 113 72-198 1-114 (218)
99 1id1_A Putative potassium chan 93.3 0.18 6.2E-06 44.2 7.3 90 71-167 3-95 (153)
100 2io8_A Bifunctional glutathion 93.3 0.22 7.6E-06 54.2 9.2 120 159-297 474-599 (619)
101 1p9l_A Dihydrodipicolinate red 93.1 0.76 2.6E-05 44.0 11.8 97 73-175 2-104 (245)
102 3m2p_A UDP-N-acetylglucosamine 92.7 0.87 3E-05 44.5 12.0 69 70-151 1-70 (311)
103 2wm3_A NMRA-like family domain 92.3 0.74 2.5E-05 44.7 10.8 73 71-152 5-81 (299)
104 1lss_A TRK system potassium up 92.2 0.27 9.2E-06 41.8 6.6 90 72-168 5-94 (140)
105 1t2a_A GDP-mannose 4,6 dehydra 92.1 0.7 2.4E-05 46.6 10.6 81 65-152 18-111 (375)
106 3dfz_A SIRC, precorrin-2 dehyd 91.9 0.19 6.4E-06 47.6 5.6 32 71-102 31-62 (223)
107 3dhn_A NAD-dependent epimerase 91.9 0.43 1.5E-05 44.3 8.1 72 71-152 4-76 (227)
108 2c20_A UDP-glucose 4-epimerase 91.8 0.6 2E-05 46.0 9.5 75 71-152 1-76 (330)
109 4egb_A DTDP-glucose 4,6-dehydr 91.7 1.7 5.8E-05 43.0 12.8 76 69-151 22-106 (346)
110 3o9z_A Lipopolysaccaride biosy 91.4 1.5 5.1E-05 43.4 12.0 93 71-173 3-101 (312)
111 3c85_A Putative glutathione-re 91.1 0.23 7.9E-06 44.9 5.2 91 71-168 39-130 (183)
112 3sc6_A DTDP-4-dehydrorhamnose 91.1 0.54 1.8E-05 45.4 8.2 58 73-152 7-65 (287)
113 2c5a_A GDP-mannose-3', 5'-epim 90.9 1.1 3.6E-05 45.5 10.5 74 70-152 28-102 (379)
114 2jl1_A Triphenylmethane reduct 90.8 0.54 1.9E-05 45.3 7.9 89 72-169 1-99 (287)
115 2yy7_A L-threonine dehydrogena 90.8 0.71 2.4E-05 45.0 8.8 74 70-152 1-77 (312)
116 2q1w_A Putative nucleotide sug 90.7 1.1 3.9E-05 44.2 10.4 76 70-152 20-98 (333)
117 3ius_A Uncharacterized conserv 90.7 0.41 1.4E-05 46.2 6.9 36 69-104 3-38 (286)
118 1n7h_A GDP-D-mannose-4,6-dehyd 90.6 1.2 4E-05 44.9 10.6 77 70-152 27-115 (381)
119 4ina_A Saccharopine dehydrogen 90.6 0.66 2.3E-05 47.9 8.7 124 71-202 1-139 (405)
120 4id9_A Short-chain dehydrogena 90.6 1.3 4.4E-05 43.9 10.7 67 69-150 17-84 (347)
121 3e48_A Putative nucleoside-dip 90.3 1.6 5.5E-05 42.0 10.8 89 72-169 1-98 (289)
122 3gpi_A NAD-dependent epimerase 90.1 0.3 1E-05 47.3 5.3 35 71-105 3-37 (286)
123 2axq_A Saccharopine dehydrogen 90.1 0.57 1.9E-05 49.4 7.8 124 62-202 14-142 (467)
124 1rpn_A GDP-mannose 4,6-dehydra 90.1 1.3 4.5E-05 43.5 10.2 78 67-151 10-94 (335)
125 3enk_A UDP-glucose 4-epimerase 89.8 1.3 4.4E-05 43.7 9.9 75 71-152 5-87 (341)
126 4ea9_A Perosamine N-acetyltran 89.7 1.3 4.3E-05 41.4 9.2 35 67-101 8-42 (220)
127 3dqp_A Oxidoreductase YLBE; al 89.7 1.3 4.5E-05 40.8 9.2 70 73-154 2-74 (219)
128 3n6x_A Putative glutathionylsp 89.6 0.37 1.3E-05 50.7 5.8 70 196-274 340-411 (474)
129 3qy9_A DHPR, dihydrodipicolina 89.6 1.4 4.8E-05 42.1 9.4 31 71-101 3-33 (243)
130 2ydy_A Methionine adenosyltran 89.5 0.83 2.8E-05 44.7 8.1 68 70-152 1-69 (315)
131 3pdi_B Nitrogenase MOFE cofact 89.4 1.1 3.9E-05 46.9 9.4 85 71-172 313-397 (458)
132 3s2u_A UDP-N-acetylglucosamine 89.2 1.5 5.3E-05 44.2 10.1 101 70-172 1-119 (365)
133 2x4g_A Nucleoside-diphosphate- 89.2 1.3 4.6E-05 43.6 9.5 70 72-150 14-84 (342)
134 1ek6_A UDP-galactose 4-epimera 88.9 1.2 4.2E-05 44.1 8.9 76 70-152 1-90 (348)
135 3ruf_A WBGU; rossmann fold, UD 88.6 1.2 4.1E-05 44.2 8.7 74 70-152 24-109 (351)
136 2pk3_A GDP-6-deoxy-D-LYXO-4-he 88.5 2 6.9E-05 41.9 10.1 73 69-152 10-83 (321)
137 3abi_A Putative uncharacterize 87.7 0.73 2.5E-05 46.7 6.4 115 72-202 17-131 (365)
138 3rft_A Uronate dehydrogenase; 87.7 0.96 3.3E-05 43.3 7.0 71 70-152 2-73 (267)
139 2pzm_A Putative nucleotide sug 87.2 2.4 8.2E-05 41.7 9.8 75 71-152 20-97 (330)
140 3sxp_A ADP-L-glycero-D-mannohe 86.9 2.6 8.8E-05 42.1 10.0 75 70-152 9-99 (362)
141 3orf_A Dihydropteridine reduct 86.6 3.2 0.00011 39.3 10.0 72 68-152 19-96 (251)
142 1e6u_A GDP-fucose synthetase; 86.6 1.1 3.9E-05 43.7 7.0 61 71-152 3-64 (321)
143 2aef_A Calcium-gated potassium 86.5 0.37 1.3E-05 45.4 3.1 112 71-198 9-120 (234)
144 3ijr_A Oxidoreductase, short c 86.4 2.1 7.3E-05 41.6 8.8 34 71-104 47-81 (291)
145 1rkx_A CDP-glucose-4,6-dehydra 86.4 3.3 0.00011 41.1 10.4 75 71-152 9-89 (357)
146 3iup_A Putative NADPH:quinone 86.3 2.6 8.8E-05 42.8 9.7 78 70-153 170-250 (379)
147 2z1m_A GDP-D-mannose dehydrata 86.2 2.5 8.5E-05 41.5 9.3 77 71-152 3-84 (345)
148 1orr_A CDP-tyvelose-2-epimeras 86.2 2.5 8.4E-05 41.7 9.2 75 71-152 1-82 (347)
149 2d1y_A Hypothetical protein TT 86.1 2.3 7.7E-05 40.4 8.6 75 70-152 5-86 (256)
150 4g65_A TRK system potassium up 86.1 0.44 1.5E-05 50.1 3.8 76 71-153 3-78 (461)
151 3f8d_A Thioredoxin reductase ( 86.1 1.4 4.9E-05 42.7 7.3 35 69-103 13-47 (323)
152 3oa2_A WBPB; oxidoreductase, s 85.8 3.8 0.00013 40.5 10.4 93 71-173 3-102 (318)
153 1sb8_A WBPP; epimerase, 4-epim 85.7 2.6 8.8E-05 41.9 9.2 73 71-152 27-111 (352)
154 3ay3_A NAD-dependent epimerase 85.6 0.71 2.4E-05 44.1 4.8 71 70-152 1-72 (267)
155 1uay_A Type II 3-hydroxyacyl-C 85.6 3.4 0.00012 38.3 9.5 69 71-152 2-75 (242)
156 2we8_A Xanthine dehydrogenase; 85.6 5.7 0.00019 40.6 11.7 36 70-105 203-238 (386)
157 4hv4_A UDP-N-acetylmuramate--L 85.6 2 6.7E-05 45.5 8.5 92 71-178 22-114 (494)
158 1pjq_A CYSG, siroheme synthase 85.4 1.5 5E-05 46.0 7.4 86 71-171 12-100 (457)
159 3eag_A UDP-N-acetylmuramate:L- 85.3 3.1 0.00011 41.3 9.5 90 71-173 4-95 (326)
160 3keo_A Redox-sensing transcrip 85.2 0.69 2.4E-05 43.3 4.2 89 71-172 84-176 (212)
161 2dc1_A L-aspartate dehydrogena 85.0 3.4 0.00012 38.8 9.2 103 73-198 2-104 (236)
162 1jw9_B Molybdopterin biosynthe 84.8 1.1 3.6E-05 43.0 5.5 30 71-100 31-61 (249)
163 2dkn_A 3-alpha-hydroxysteroid 84.8 1.4 4.8E-05 41.3 6.4 69 71-153 1-72 (255)
164 2p5y_A UDP-glucose 4-epimerase 84.6 2.8 9.5E-05 40.8 8.7 71 72-151 1-74 (311)
165 1vl0_A DTDP-4-dehydrorhamnose 84.5 1.6 5.5E-05 42.0 6.8 63 68-152 9-72 (292)
166 1kyq_A Met8P, siroheme biosynt 84.3 0.9 3.1E-05 44.3 4.8 34 71-104 13-46 (274)
167 4f3y_A DHPR, dihydrodipicolina 84.1 1.3 4.3E-05 43.2 5.7 91 71-172 7-101 (272)
168 1lnq_A MTHK channels, potassiu 83.9 0.19 6.4E-06 50.4 -0.3 112 71-198 115-226 (336)
169 2nm0_A Probable 3-oxacyl-(acyl 83.7 6 0.0002 37.5 10.4 71 70-152 20-96 (253)
170 4gx0_A TRKA domain protein; me 83.5 2 7E-05 46.1 7.7 110 72-199 349-458 (565)
171 1oi7_A Succinyl-COA synthetase 83.4 3.5 0.00012 40.4 8.7 28 71-98 7-35 (288)
172 3ec7_A Putative dehydrogenase; 83.3 1.7 5.7E-05 43.8 6.5 145 67-228 19-174 (357)
173 1n2s_A DTDP-4-, DTDP-glucose o 83.3 4.5 0.00015 38.9 9.5 62 72-152 1-63 (299)
174 3ijp_A DHPR, dihydrodipicolina 83.2 1.5 5.1E-05 43.0 5.9 34 70-103 20-55 (288)
175 4ew6_A D-galactose-1-dehydroge 83.1 3.3 0.00011 41.1 8.6 88 66-172 20-109 (330)
176 3upl_A Oxidoreductase; rossman 83.0 2.4 8.1E-05 44.2 7.6 148 72-226 24-188 (446)
177 2q1s_A Putative nucleotide sug 82.9 2.8 9.5E-05 42.2 8.1 75 71-152 32-108 (377)
178 3auf_A Glycinamide ribonucleot 82.7 5.6 0.00019 37.5 9.5 77 71-152 22-111 (229)
179 3dii_A Short-chain dehydrogena 82.6 1.2 4.1E-05 42.2 4.8 76 70-152 1-84 (247)
180 1xq6_A Unknown protein; struct 82.4 1.8 6.2E-05 40.4 6.0 73 70-152 3-78 (253)
181 1db3_A GDP-mannose 4,6-dehydra 82.2 3.3 0.00011 41.3 8.3 76 71-151 1-86 (372)
182 2xdq_B Light-independent proto 81.9 5 0.00017 42.6 9.8 86 71-172 303-394 (511)
183 1udb_A Epimerase, UDP-galactos 81.7 6.7 0.00023 38.4 10.2 74 72-152 1-82 (338)
184 1zud_1 Adenylyltransferase THI 81.4 16 0.00053 34.7 12.3 118 71-202 28-149 (251)
185 3u7q_A Nitrogenase molybdenum- 81.4 2.5 8.5E-05 44.8 7.2 88 71-172 348-439 (492)
186 3gem_A Short chain dehydrogena 81.3 3 0.0001 39.8 7.3 75 71-152 27-108 (260)
187 2hrz_A AGR_C_4963P, nucleoside 81.2 5.5 0.00019 39.1 9.4 75 70-152 13-95 (342)
188 2bka_A CC3, TAT-interacting pr 81.2 1.8 6.2E-05 40.3 5.5 73 71-152 18-93 (242)
189 1gy8_A UDP-galactose 4-epimera 81.1 6.5 0.00022 39.5 10.1 74 72-152 3-102 (397)
190 3tqq_A Methionyl-tRNA formyltr 81.1 3.6 0.00012 40.8 7.8 38 70-107 1-38 (314)
191 3ged_A Short-chain dehydrogena 81.0 1.8 6E-05 41.5 5.3 81 70-152 1-84 (247)
192 2ggs_A 273AA long hypothetical 80.9 10 0.00036 35.6 11.0 65 73-153 2-67 (273)
193 2nu8_A Succinyl-COA ligase [AD 80.9 10 0.00034 37.0 10.9 109 71-199 7-118 (288)
194 1yo6_A Putative carbonyl reduc 80.8 3.7 0.00013 38.2 7.6 35 71-105 3-40 (250)
195 2ywr_A Phosphoribosylglycinami 80.6 4.9 0.00017 37.5 8.2 74 71-149 1-86 (216)
196 1mio_B Nitrogenase molybdenum 80.5 3.8 0.00013 42.9 8.2 72 71-150 312-392 (458)
197 3vtz_A Glucose 1-dehydrogenase 80.4 7.4 0.00025 37.2 9.8 71 71-152 14-90 (269)
198 3pdi_A Nitrogenase MOFE cofact 80.4 2.3 7.8E-05 44.9 6.4 88 71-172 332-423 (483)
199 4b8w_A GDP-L-fucose synthase; 80.3 6.4 0.00022 37.7 9.4 64 69-150 4-68 (319)
200 2dtx_A Glucose 1-dehydrogenase 80.3 11 0.00038 35.8 10.9 70 71-152 8-83 (264)
201 2x5o_A UDP-N-acetylmuramoylala 80.1 16 0.00055 37.7 12.8 88 71-173 5-93 (439)
202 3uuw_A Putative oxidoreductase 79.9 2.7 9.4E-05 41.1 6.5 117 70-202 5-123 (308)
203 2ag5_A DHRS6, dehydrogenase/re 79.6 5.6 0.00019 37.3 8.4 76 70-152 5-83 (246)
204 2fwm_X 2,3-dihydro-2,3-dihydro 79.5 13 0.00045 34.8 11.1 71 71-152 7-83 (250)
205 3d7l_A LIN1944 protein; APC893 79.4 4.7 0.00016 36.3 7.5 62 72-152 4-67 (202)
206 3k31_A Enoyl-(acyl-carrier-pro 79.2 4.4 0.00015 39.4 7.8 76 71-153 30-118 (296)
207 3ajr_A NDP-sugar epimerase; L- 79.2 5 0.00017 38.9 8.2 68 73-152 1-71 (317)
208 3h2s_A Putative NADH-flavin re 79.1 1.5 5.1E-05 40.3 4.1 32 72-103 1-33 (224)
209 1uzm_A 3-oxoacyl-[acyl-carrier 79.0 8.6 0.00029 36.1 9.6 71 70-152 14-90 (247)
210 1ff9_A Saccharopine reductase; 79.0 4.2 0.00014 42.4 7.9 115 71-202 3-122 (450)
211 3mz0_A Inositol 2-dehydrogenas 79.0 3.6 0.00012 41.0 7.2 142 70-228 1-153 (344)
212 2z2v_A Hypothetical protein PH 78.9 2.5 8.6E-05 42.8 6.0 137 71-227 16-156 (365)
213 2p2s_A Putative oxidoreductase 78.9 8.2 0.00028 38.1 9.8 145 71-228 4-153 (336)
214 4b4o_A Epimerase family protei 78.8 2.5 8.4E-05 40.9 5.7 33 72-104 1-34 (298)
215 1e3j_A NADP(H)-dependent ketos 78.8 3.4 0.00012 41.2 7.0 79 70-153 168-250 (352)
216 3rfo_A Methionyl-tRNA formyltr 78.6 4 0.00014 40.5 7.2 37 71-107 4-40 (317)
217 3kkj_A Amine oxidase, flavin-c 78.5 2.2 7.7E-05 39.0 5.1 31 72-102 3-33 (336)
218 3on5_A BH1974 protein; structu 78.5 4 0.00014 41.3 7.3 49 71-119 199-248 (362)
219 3l6e_A Oxidoreductase, short-c 78.4 3.3 0.00011 38.8 6.3 33 71-103 3-36 (235)
220 1mio_A Nitrogenase molybdenum 78.4 6.3 0.00022 42.1 9.1 32 71-102 335-366 (533)
221 3afn_B Carbonyl reductase; alp 78.3 4.8 0.00016 37.7 7.5 77 71-152 7-94 (258)
222 1vli_A Spore coat polysacchari 78.2 12 0.00041 38.1 10.6 124 127-274 41-196 (385)
223 3p19_A BFPVVD8, putative blue 78.1 3.6 0.00012 39.4 6.6 34 70-103 15-49 (266)
224 3m1a_A Putative dehydrogenase; 78.1 4.8 0.00016 38.5 7.6 75 71-152 5-88 (281)
225 3un1_A Probable oxidoreductase 77.8 11 0.00036 35.8 9.9 72 71-152 28-105 (260)
226 3db2_A Putative NADPH-dependen 77.7 2.6 8.8E-05 42.2 5.7 139 71-228 5-152 (354)
227 2cfc_A 2-(R)-hydroxypropyl-COM 77.5 4.2 0.00014 38.0 6.8 33 71-103 2-35 (250)
228 3rkr_A Short chain oxidoreduct 77.4 3.9 0.00013 38.9 6.6 38 66-103 24-62 (262)
229 3m6i_A L-arabinitol 4-dehydrog 77.4 1 3.4E-05 45.4 2.5 78 70-152 179-261 (363)
230 2ehd_A Oxidoreductase, oxidore 77.2 4.2 0.00014 37.7 6.6 76 70-152 4-87 (234)
231 3rui_A Ubiquitin-like modifier 77.2 4.9 0.00017 40.3 7.4 31 71-101 34-64 (340)
232 3aek_B Light-independent proto 77.1 5.7 0.00019 42.3 8.4 86 71-172 280-371 (525)
233 1kew_A RMLB;, DTDP-D-glucose 4 77.1 10 0.00034 37.4 9.9 73 73-152 2-82 (361)
234 3mtj_A Homoserine dehydrogenas 77.0 6.9 0.00024 40.7 8.7 112 72-199 11-132 (444)
235 3dfu_A Uncharacterized protein 77.0 5.3 0.00018 37.8 7.2 89 70-173 5-95 (232)
236 2dq4_A L-threonine 3-dehydroge 76.9 2.4 8.1E-05 42.3 5.1 75 70-152 164-240 (343)
237 1oc2_A DTDP-glucose 4,6-dehydr 76.8 13 0.00044 36.4 10.5 73 71-152 4-84 (348)
238 2zcu_A Uncharacterized oxidore 76.8 4.7 0.00016 38.4 7.1 69 73-150 1-72 (286)
239 3vps_A TUNA, NAD-dependent epi 76.8 2.7 9.3E-05 40.8 5.4 36 69-104 5-41 (321)
240 4had_A Probable oxidoreductase 76.8 5.8 0.0002 39.4 8.0 91 71-173 23-115 (350)
241 3da8_A Probable 5'-phosphoribo 76.8 1.8 6.2E-05 40.5 3.9 78 69-152 10-99 (215)
242 3ehe_A UDP-glucose 4-epimerase 76.8 2.1 7.3E-05 41.6 4.6 30 71-101 1-31 (313)
243 3m2t_A Probable dehydrogenase; 76.8 8.9 0.0003 38.4 9.4 89 72-172 6-96 (359)
244 2v6g_A Progesterone 5-beta-red 76.8 4.1 0.00014 40.3 6.9 72 72-152 2-81 (364)
245 3q0i_A Methionyl-tRNA formyltr 76.7 4 0.00014 40.5 6.6 37 71-107 7-43 (318)
246 1j5p_A Aspartate dehydrogenase 76.7 8.5 0.00029 36.8 8.6 29 71-102 12-40 (253)
247 2rhc_B Actinorhodin polyketide 76.7 6.7 0.00023 37.6 8.1 38 66-103 17-55 (277)
248 1f0k_A MURG, UDP-N-acetylgluco 76.6 15 0.0005 36.0 10.9 99 72-172 7-123 (364)
249 2a4k_A 3-oxoacyl-[acyl carrier 76.6 5.2 0.00018 38.1 7.3 34 70-103 5-39 (263)
250 1xgk_A Nitrogen metabolite rep 76.5 8.2 0.00028 38.5 9.0 71 71-150 5-80 (352)
251 4b79_A PA4098, probable short- 76.4 16 0.00053 34.7 10.4 75 71-152 11-87 (242)
252 1qsg_A Enoyl-[acyl-carrier-pro 76.2 3 0.0001 39.7 5.4 34 71-104 9-45 (265)
253 3q2i_A Dehydrogenase; rossmann 76.2 4.5 0.00015 40.5 6.9 90 71-173 13-104 (354)
254 3oec_A Carveol dehydrogenase ( 76.2 14 0.00047 36.2 10.5 39 65-103 40-79 (317)
255 2bll_A Protein YFBG; decarboxy 76.2 6.5 0.00022 38.5 8.1 33 72-104 1-35 (345)
256 2ho3_A Oxidoreductase, GFO/IDH 75.9 2.8 9.6E-05 41.4 5.3 88 72-172 2-90 (325)
257 1z45_A GAL10 bifunctional prot 75.9 8.4 0.00029 42.3 9.7 75 71-152 11-93 (699)
258 4e6p_A Probable sorbitol dehyd 75.9 4.8 0.00016 38.2 6.8 75 71-152 8-91 (259)
259 2pd4_A Enoyl-[acyl-carrier-pro 75.8 5.4 0.00018 38.2 7.2 35 70-104 5-42 (275)
260 2o23_A HADH2 protein; HSD17B10 75.7 12 0.00041 35.1 9.6 75 71-152 12-95 (265)
261 2bw0_A 10-FTHFDH, 10-formyltet 75.6 1.8 6.3E-05 43.2 3.8 35 72-106 23-57 (329)
262 3gms_A Putative NADPH:quinone 75.5 4 0.00014 40.5 6.3 78 69-152 143-222 (340)
263 1sny_A Sniffer CG10964-PA; alp 75.5 5 0.00017 37.9 6.8 35 71-105 21-59 (267)
264 1fmt_A Methionyl-tRNA FMet for 75.4 6.2 0.00021 39.1 7.6 36 72-107 4-39 (314)
265 3fbs_A Oxidoreductase; structu 75.4 3.3 0.00011 39.5 5.6 33 70-102 1-33 (297)
266 3gvx_A Glycerate dehydrogenase 75.3 9.8 0.00034 37.1 8.9 33 71-103 122-154 (290)
267 1fjh_A 3alpha-hydroxysteroid d 75.2 3.8 0.00013 38.5 5.8 69 71-153 1-72 (257)
268 3rih_A Short chain dehydrogena 75.2 9.3 0.00032 37.1 8.8 40 66-105 36-76 (293)
269 3tpc_A Short chain alcohol deh 75.1 16 0.00055 34.3 10.3 78 71-153 7-91 (257)
270 3ip1_A Alcohol dehydrogenase, 75.1 2.9 9.8E-05 42.8 5.2 79 69-153 212-292 (404)
271 2hun_A 336AA long hypothetical 75.0 14 0.00049 35.9 10.2 72 72-152 4-84 (336)
272 1yqd_A Sinapyl alcohol dehydro 74.9 2.1 7E-05 43.3 4.0 88 70-168 187-276 (366)
273 3lk7_A UDP-N-acetylmuramoylala 74.9 7.6 0.00026 40.4 8.5 94 71-179 9-106 (451)
274 2yv2_A Succinyl-COA synthetase 74.8 20 0.00068 35.0 11.1 27 72-98 14-41 (297)
275 2bln_A Protein YFBG; transfera 74.8 5.1 0.00017 39.5 6.8 36 72-107 1-36 (305)
276 2p10_A MLL9387 protein; putati 74.8 38 0.0013 32.8 12.6 165 72-257 28-221 (286)
277 3d3w_A L-xylulose reductase; u 74.8 4.8 0.00016 37.5 6.4 75 71-152 7-85 (244)
278 3bio_A Oxidoreductase, GFO/IDH 74.7 5.4 0.00018 39.2 6.9 115 66-198 4-119 (304)
279 3i4f_A 3-oxoacyl-[acyl-carrier 74.6 4.8 0.00016 38.1 6.4 76 70-152 6-94 (264)
280 2dt5_A AT-rich DNA-binding pro 74.5 3.2 0.00011 38.6 4.9 85 71-170 80-166 (211)
281 1yde_A Retinal dehydrogenase/r 74.2 6.2 0.00021 37.7 7.1 33 71-103 9-42 (270)
282 3e82_A Putative oxidoreductase 74.1 4.8 0.00016 40.5 6.5 143 71-229 7-154 (364)
283 4dio_A NAD(P) transhydrogenase 73.8 4.2 0.00014 41.8 6.0 34 71-104 190-223 (405)
284 2yv1_A Succinyl-COA ligase [AD 73.8 13 0.00044 36.3 9.4 27 72-98 14-41 (294)
285 3ihm_A Styrene monooxygenase A 73.7 3 0.0001 43.0 5.0 34 69-102 20-53 (430)
286 3evn_A Oxidoreductase, GFO/IDH 73.7 6.8 0.00023 38.7 7.5 141 71-229 5-154 (329)
287 2ekp_A 2-deoxy-D-gluconate 3-d 73.6 15 0.0005 34.1 9.5 75 71-152 2-79 (239)
288 3gvc_A Oxidoreductase, probabl 73.6 4.9 0.00017 38.7 6.2 76 71-153 29-113 (277)
289 4hkt_A Inositol 2-dehydrogenas 73.5 3.8 0.00013 40.5 5.5 145 70-229 2-150 (331)
290 3r1i_A Short-chain type dehydr 73.4 12 0.00041 35.8 9.0 75 71-152 32-118 (276)
291 2ywl_A Thioredoxin reductase r 73.4 4.4 0.00015 35.8 5.4 33 72-104 2-34 (180)
292 1geg_A Acetoin reductase; SDR 73.4 5.8 0.0002 37.4 6.6 34 70-103 1-35 (256)
293 3pxx_A Carveol dehydrogenase; 73.2 27 0.00092 33.1 11.5 36 68-103 7-43 (287)
294 3nzo_A UDP-N-acetylglucosamine 73.2 10 0.00034 38.6 8.8 75 71-150 35-119 (399)
295 2vns_A Metalloreductase steap3 73.2 3.7 0.00013 38.0 5.0 33 70-102 27-59 (215)
296 4hb9_A Similarities with proba 73.2 3.8 0.00013 41.1 5.6 31 72-102 2-32 (412)
297 3ko8_A NAD-dependent epimerase 73.1 2.3 7.9E-05 41.2 3.8 34 72-105 1-35 (312)
298 2wsb_A Galactitol dehydrogenas 73.1 6.5 0.00022 36.7 6.9 75 71-152 11-94 (254)
299 1ooe_A Dihydropteridine reduct 73.1 8.6 0.00029 35.7 7.7 35 71-105 3-38 (236)
300 2gek_A Phosphatidylinositol ma 72.9 9.9 0.00034 37.8 8.6 106 65-172 14-134 (406)
301 3o38_A Short chain dehydrogena 72.8 6.7 0.00023 37.1 7.0 36 69-104 20-57 (266)
302 3tzq_B Short-chain type dehydr 72.8 14 0.00048 35.1 9.3 75 71-152 11-94 (271)
303 1spx_A Short-chain reductase f 72.8 5.1 0.00017 38.3 6.1 35 69-103 4-39 (278)
304 1pqw_A Polyketide synthase; ro 72.7 3 0.0001 37.7 4.3 76 71-152 39-116 (198)
305 4ggi_A UDP-2,3-diacylglucosami 72.4 1.7 5.9E-05 42.5 2.6 73 69-150 3-76 (283)
306 3fhl_A Putative oxidoreductase 72.4 9 0.00031 38.3 8.1 138 71-229 5-152 (362)
307 1h2b_A Alcohol dehydrogenase; 72.4 3.2 0.00011 41.7 4.7 76 70-152 186-263 (359)
308 4g65_A TRK system potassium up 72.4 3.3 0.00011 43.3 5.0 116 69-199 233-349 (461)
309 2cf5_A Atccad5, CAD, cinnamyl 72.3 3.9 0.00013 41.0 5.3 73 70-153 180-254 (357)
310 1nff_A Putative oxidoreductase 72.3 7 0.00024 37.0 6.9 33 71-103 7-40 (260)
311 3e9m_A Oxidoreductase, GFO/IDH 71.9 4.8 0.00016 39.9 5.8 142 71-230 5-155 (330)
312 3jyn_A Quinone oxidoreductase; 71.8 3 0.0001 41.2 4.3 79 69-153 139-219 (325)
313 1cyd_A Carbonyl reductase; sho 71.8 6.7 0.00023 36.4 6.6 75 71-152 7-85 (244)
314 2xdo_A TETX2 protein; tetracyc 71.7 4.5 0.00015 41.0 5.7 38 66-103 21-58 (398)
315 3i23_A Oxidoreductase, GFO/IDH 71.7 4.8 0.00016 40.2 5.8 148 70-230 1-153 (349)
316 2p91_A Enoyl-[acyl-carrier-pro 71.3 7 0.00024 37.5 6.8 34 71-104 21-57 (285)
317 3evt_A Phosphoglycerate dehydr 71.2 12 0.00041 37.1 8.5 35 70-104 136-170 (324)
318 3uko_A Alcohol dehydrogenase c 71.2 8.3 0.00028 38.8 7.6 78 69-152 192-272 (378)
319 3nrc_A Enoyl-[acyl-carrier-pro 71.0 13 0.00043 35.6 8.5 80 66-153 21-113 (280)
320 3ezy_A Dehydrogenase; structur 70.9 5.6 0.00019 39.6 6.1 142 70-229 1-151 (344)
321 3tnl_A Shikimate dehydrogenase 70.8 7 0.00024 38.7 6.7 31 71-101 154-185 (315)
322 2yq5_A D-isomer specific 2-hyd 70.8 16 0.00054 36.6 9.3 33 71-103 148-180 (343)
323 3ef6_A Toluene 1,2-dioxygenase 70.7 4.7 0.00016 41.2 5.6 35 70-104 1-37 (410)
324 3ak4_A NADH-dependent quinucli 70.6 10 0.00036 35.7 7.8 75 71-152 12-95 (263)
325 2wqp_A Polysialic acid capsule 70.6 22 0.00076 35.6 10.3 111 127-256 32-173 (349)
326 3v2h_A D-beta-hydroxybutyrate 70.6 11 0.00037 36.3 7.9 38 65-102 19-57 (281)
327 3s55_A Putative short-chain de 70.6 31 0.0011 32.7 11.3 35 69-103 8-43 (281)
328 1zmt_A Haloalcohol dehalogenas 70.5 3.7 0.00013 38.8 4.5 75 71-152 1-81 (254)
329 3rd5_A Mypaa.01249.C; ssgcid, 70.5 5.5 0.00019 38.4 5.8 78 70-152 15-95 (291)
330 1dhr_A Dihydropteridine reduct 70.3 19 0.00067 33.3 9.5 35 71-105 7-42 (241)
331 2wyu_A Enoyl-[acyl carrier pro 70.3 5.7 0.0002 37.6 5.8 33 71-103 8-43 (261)
332 2hcy_A Alcohol dehydrogenase 1 70.2 11 0.00037 37.4 8.1 77 69-152 168-247 (347)
333 3fpc_A NADP-dependent alcohol 70.2 2.7 9.3E-05 42.0 3.6 78 69-152 165-244 (352)
334 3rc1_A Sugar 3-ketoreductase; 70.2 4.4 0.00015 40.6 5.1 140 71-229 27-176 (350)
335 3uog_A Alcohol dehydrogenase; 70.1 3.7 0.00013 41.2 4.6 78 69-152 188-266 (363)
336 2bgk_A Rhizome secoisolaricire 70.1 7.7 0.00026 36.8 6.7 33 71-103 16-49 (278)
337 1xkq_A Short-chain reductase f 70.0 6.8 0.00023 37.5 6.4 34 70-103 5-39 (280)
338 1pl8_A Human sorbitol dehydrog 70.0 6.7 0.00023 39.2 6.5 79 70-152 171-251 (356)
339 1vl8_A Gluconate 5-dehydrogena 70.0 8.9 0.0003 36.5 7.1 33 71-103 21-54 (267)
340 1wv2_A Thiazole moeity, thiazo 69.9 37 0.0012 32.5 11.0 147 82-260 88-242 (265)
341 1xdw_A NAD+-dependent (R)-2-hy 69.9 9.7 0.00033 37.9 7.5 34 70-103 145-178 (331)
342 1yb5_A Quinone oxidoreductase; 69.8 4.7 0.00016 40.4 5.3 78 69-152 169-248 (351)
343 3ftp_A 3-oxoacyl-[acyl-carrier 69.7 8.1 0.00028 36.9 6.8 33 71-103 28-61 (270)
344 1xg5_A ARPG836; short chain de 69.6 11 0.00037 36.0 7.7 33 71-103 32-65 (279)
345 2eez_A Alanine dehydrogenase; 69.6 5 0.00017 40.6 5.4 33 71-103 166-198 (369)
346 1qp8_A Formate dehydrogenase; 69.6 13 0.00046 36.3 8.4 33 70-102 123-155 (303)
347 3h8v_A Ubiquitin-like modifier 69.6 7.6 0.00026 38.0 6.5 34 71-105 36-69 (292)
348 3ggo_A Prephenate dehydrogenas 69.4 5.3 0.00018 39.4 5.5 34 67-100 29-64 (314)
349 3pi7_A NADH oxidoreductase; gr 69.4 7.4 0.00025 38.7 6.6 75 72-152 166-242 (349)
350 3qwb_A Probable quinone oxidor 69.3 3.6 0.00012 40.7 4.2 79 69-153 147-227 (334)
351 4gsl_A Ubiquitin-like modifier 69.2 8.8 0.0003 41.5 7.4 31 71-101 326-356 (615)
352 3oti_A CALG3; calicheamicin, T 69.2 21 0.00073 35.6 10.2 32 71-102 20-56 (398)
353 1yvv_A Amine oxidase, flavin-c 69.1 4.6 0.00016 39.4 4.9 32 71-102 2-33 (336)
354 4gx0_A TRKA domain protein; me 69.0 4.8 0.00016 43.1 5.4 74 69-149 125-198 (565)
355 4dyv_A Short-chain dehydrogena 68.9 7.3 0.00025 37.3 6.3 80 66-152 23-111 (272)
356 3ohs_X Trans-1,2-dihydrobenzen 68.8 4.8 0.00017 39.8 5.1 91 70-172 1-94 (334)
357 3tl3_A Short-chain type dehydr 68.8 6.7 0.00023 37.0 5.9 32 71-102 9-41 (257)
358 1dxy_A D-2-hydroxyisocaproate 68.6 10 0.00035 37.8 7.4 34 70-103 144-177 (333)
359 2q2v_A Beta-D-hydroxybutyrate 68.6 14 0.00047 34.7 8.1 34 71-104 4-38 (255)
360 3e8x_A Putative NAD-dependent 68.5 5.1 0.00017 37.1 4.9 37 69-105 19-56 (236)
361 2h7i_A Enoyl-[acyl-carrier-pro 68.5 5.8 0.0002 37.8 5.4 34 71-104 7-43 (269)
362 3rwb_A TPLDH, pyridoxal 4-dehy 68.4 7.1 0.00024 36.7 6.0 33 70-102 5-38 (247)
363 3awd_A GOX2181, putative polyo 68.1 8.6 0.00029 36.0 6.5 33 71-103 13-46 (260)
364 3tjr_A Short chain dehydrogena 67.9 12 0.00043 36.2 7.8 34 70-103 30-64 (301)
365 2gn4_A FLAA1 protein, UDP-GLCN 67.7 6.8 0.00023 38.9 5.9 74 71-152 21-100 (344)
366 3rjz_A N-type ATP pyrophosphat 67.7 31 0.001 32.6 10.1 143 72-232 5-150 (237)
367 1wwk_A Phosphoglycerate dehydr 67.7 17 0.00057 35.7 8.7 34 69-102 140-173 (307)
368 1zk4_A R-specific alcohol dehy 67.7 9.5 0.00033 35.5 6.7 33 71-103 6-39 (251)
369 4dll_A 2-hydroxy-3-oxopropiona 67.6 16 0.00056 35.8 8.7 32 70-101 30-61 (320)
370 3ado_A Lambda-crystallin; L-gu 67.5 3.9 0.00013 40.7 4.0 36 66-101 1-36 (319)
371 1xhl_A Short-chain dehydrogena 67.4 8 0.00027 37.6 6.3 33 71-103 26-59 (297)
372 3e18_A Oxidoreductase; dehydro 67.3 9.8 0.00033 38.1 7.1 137 72-228 6-151 (359)
373 3kux_A Putative oxidoreductase 67.3 14 0.00049 36.6 8.3 141 72-228 8-153 (352)
374 1yb1_A 17-beta-hydroxysteroid 67.3 14 0.00048 35.0 8.0 33 71-103 31-64 (272)
375 3e03_A Short chain dehydrogena 67.3 30 0.001 32.8 10.4 35 71-105 6-41 (274)
376 3oh8_A Nucleoside-diphosphate 67.2 22 0.00076 37.4 10.2 35 71-105 147-182 (516)
377 1cdo_A Alcohol dehydrogenase; 67.2 10 0.00034 38.1 7.1 78 69-152 191-271 (374)
378 1w6u_A 2,4-dienoyl-COA reducta 67.0 9.9 0.00034 36.6 6.9 33 71-103 26-59 (302)
379 2iyf_A OLED, oleandomycin glyc 67.0 15 0.00053 37.1 8.6 34 71-104 7-45 (430)
380 3ew7_A LMO0794 protein; Q8Y8U8 67.0 6.5 0.00022 35.6 5.3 33 72-104 1-34 (221)
381 4ezb_A Uncharacterized conserv 67.0 18 0.00063 35.4 8.9 35 70-104 23-58 (317)
382 1i24_A Sulfolipid biosynthesis 66.8 14 0.0005 36.9 8.3 32 71-102 11-43 (404)
383 3grk_A Enoyl-(acyl-carrier-pro 66.8 7.6 0.00026 37.6 6.0 34 70-103 30-66 (293)
384 1vm6_A DHPR, dihydrodipicolina 66.7 22 0.00074 33.4 8.7 78 72-157 13-91 (228)
385 3itj_A Thioredoxin reductase 1 66.7 4.5 0.00015 39.4 4.3 34 69-102 20-53 (338)
386 1r6d_A TDP-glucose-4,6-dehydra 66.6 27 0.00093 33.9 10.1 72 72-152 1-85 (337)
387 4eye_A Probable oxidoreductase 66.6 5.4 0.00019 39.6 4.9 78 69-153 158-237 (342)
388 3pk0_A Short-chain dehydrogena 66.6 9.8 0.00034 36.0 6.6 34 70-103 9-43 (262)
389 2gk4_A Conserved hypothetical 66.6 23 0.00079 33.3 9.0 70 71-150 3-91 (232)
390 3grp_A 3-oxoacyl-(acyl carrier 66.5 6 0.00021 37.8 5.1 36 68-103 24-60 (266)
391 1e3i_A Alcohol dehydrogenase, 66.4 10 0.00035 38.0 7.1 78 69-152 194-274 (376)
392 3uxy_A Short-chain dehydrogena 66.4 17 0.00058 34.5 8.3 34 70-103 27-61 (266)
393 1uuf_A YAHK, zinc-type alcohol 66.4 6.2 0.00021 39.8 5.3 73 70-153 194-267 (369)
394 4huj_A Uncharacterized protein 66.3 5.1 0.00017 37.2 4.4 32 70-101 22-53 (220)
395 2d8a_A PH0655, probable L-thre 66.2 3.5 0.00012 41.1 3.5 77 70-152 167-245 (348)
396 3svt_A Short-chain type dehydr 66.2 9.9 0.00034 36.4 6.6 33 71-103 11-44 (281)
397 4h27_A L-serine dehydratase/L- 66.0 20 0.00068 36.1 9.0 98 72-196 94-193 (364)
398 2dpo_A L-gulonate 3-dehydrogen 66.0 4.3 0.00015 40.3 4.0 35 67-101 2-36 (319)
399 1j4a_A D-LDH, D-lactate dehydr 65.9 14 0.00047 36.8 7.7 32 70-101 145-176 (333)
400 1qor_A Quinone oxidoreductase; 65.9 4.6 0.00016 39.7 4.2 77 70-152 140-218 (327)
401 3jv7_A ADH-A; dehydrogenase, n 65.9 6.7 0.00023 38.9 5.5 77 69-152 170-248 (345)
402 4da9_A Short-chain dehydrogena 65.8 10 0.00036 36.3 6.7 31 71-101 29-60 (280)
403 4e12_A Diketoreductase; oxidor 65.7 6.7 0.00023 37.9 5.3 31 71-101 4-34 (283)
404 2x6t_A ADP-L-glycero-D-manno-h 65.7 6.1 0.00021 39.1 5.1 34 71-104 46-81 (357)
405 3h7a_A Short chain dehydrogena 65.7 15 0.00051 34.5 7.7 35 71-105 7-42 (252)
406 2jhf_A Alcohol dehydrogenase E 65.6 11 0.00037 37.9 7.0 78 69-152 190-270 (374)
407 3qiv_A Short-chain dehydrogena 65.6 12 0.00041 34.9 7.0 33 71-103 9-42 (253)
408 3euw_A MYO-inositol dehydrogen 65.6 8.9 0.0003 38.0 6.3 89 71-172 4-93 (344)
409 1xu9_A Corticosteroid 11-beta- 65.5 9.5 0.00032 36.6 6.3 33 71-103 28-61 (286)
410 2pnf_A 3-oxoacyl-[acyl-carrier 65.5 8.2 0.00028 35.8 5.7 33 71-103 7-40 (248)
411 4iiu_A 3-oxoacyl-[acyl-carrier 65.4 12 0.0004 35.5 6.9 35 68-102 23-58 (267)
412 1f8f_A Benzyl alcohol dehydrog 65.4 5.6 0.00019 40.0 4.8 77 69-152 189-267 (371)
413 2d0i_A Dehydrogenase; structur 65.3 14 0.00048 36.7 7.7 33 70-102 145-177 (333)
414 3ioy_A Short-chain dehydrogena 65.3 9.3 0.00032 37.5 6.3 34 71-104 8-42 (319)
415 1wly_A CAAR, 2-haloacrylate re 65.3 5 0.00017 39.6 4.4 79 69-153 144-224 (333)
416 3ip3_A Oxidoreductase, putativ 65.2 3.6 0.00012 40.9 3.2 148 70-228 1-155 (337)
417 2nwq_A Probable short-chain de 65.2 6.9 0.00023 37.5 5.2 77 72-153 22-107 (272)
418 3lzw_A Ferredoxin--NADP reduct 65.2 4.1 0.00014 39.5 3.7 33 71-103 7-39 (332)
419 2vt3_A REX, redox-sensing tran 65.1 13 0.00044 34.6 6.8 30 72-101 86-117 (215)
420 2hq1_A Glucose/ribitol dehydro 65.0 18 0.00062 33.4 8.1 31 71-101 5-36 (247)
421 1leh_A Leucine dehydrogenase; 64.9 10 0.00035 38.3 6.6 31 70-100 172-202 (364)
422 3l77_A Short-chain alcohol deh 64.9 6.5 0.00022 36.4 4.9 33 71-103 2-35 (235)
423 1y8q_A Ubiquitin-like 1 activa 64.8 24 0.00083 35.2 9.3 116 71-201 36-155 (346)
424 3ucx_A Short chain dehydrogena 64.8 11 0.00037 35.7 6.6 33 71-103 11-44 (264)
425 3n74_A 3-ketoacyl-(acyl-carrie 64.7 15 0.0005 34.5 7.4 78 71-153 9-93 (261)
426 3oig_A Enoyl-[acyl-carrier-pro 64.7 17 0.00058 34.2 7.9 33 71-103 7-42 (266)
427 3v5n_A Oxidoreductase; structu 64.7 6.7 0.00023 40.3 5.3 94 72-172 38-138 (417)
428 1uls_A Putative 3-oxoacyl-acyl 64.6 15 0.00053 34.2 7.5 75 71-152 5-86 (245)
429 3t7c_A Carveol dehydrogenase; 64.6 29 0.001 33.4 9.8 33 71-103 28-61 (299)
430 4imr_A 3-oxoacyl-(acyl-carrier 64.5 17 0.0006 34.6 8.0 80 71-152 33-118 (275)
431 3qlj_A Short chain dehydrogena 64.5 10 0.00035 37.2 6.5 38 66-103 22-60 (322)
432 1hdc_A 3-alpha, 20 beta-hydrox 64.5 16 0.00054 34.3 7.6 33 71-103 5-38 (254)
433 3rsc_A CALG2; TDP, enediyne, s 64.4 14 0.00046 37.2 7.5 97 71-172 20-144 (415)
434 1zem_A Xylitol dehydrogenase; 64.3 12 0.00039 35.5 6.6 33 71-103 7-40 (262)
435 3kvo_A Hydroxysteroid dehydrog 64.3 44 0.0015 33.1 11.2 36 71-106 45-81 (346)
436 3u7q_B Nitrogenase molybdenum- 64.3 19 0.00064 38.3 8.8 72 71-150 364-445 (523)
437 3i1j_A Oxidoreductase, short c 64.3 7.8 0.00027 36.1 5.3 33 71-103 14-47 (247)
438 1zh8_A Oxidoreductase; TM0312, 64.2 4.9 0.00017 40.0 4.0 92 69-172 16-110 (340)
439 2vob_A Trypanothione synthetas 64.2 13 0.00044 40.6 7.6 98 159-274 487-588 (652)
440 3f1l_A Uncharacterized oxidore 64.2 18 0.00063 33.8 8.0 33 71-103 12-45 (252)
441 1qgu_B Protein (nitrogenase mo 64.1 17 0.00058 38.6 8.4 71 71-150 360-441 (519)
442 3ai3_A NADPH-sorbose reductase 64.1 14 0.00047 34.8 7.1 33 71-103 7-40 (263)
443 4dry_A 3-oxoacyl-[acyl-carrier 64.1 7.9 0.00027 37.3 5.4 34 71-104 33-67 (281)
444 1z7e_A Protein aRNA; rossmann 64.0 16 0.00055 39.8 8.5 36 70-105 314-351 (660)
445 3l6d_A Putative oxidoreductase 64.0 28 0.00096 33.8 9.5 32 70-101 8-39 (306)
446 2ph5_A Homospermidine synthase 64.0 18 0.00062 37.8 8.4 96 71-174 13-113 (480)
447 4dup_A Quinone oxidoreductase; 63.9 7.3 0.00025 38.9 5.3 78 69-153 166-245 (353)
448 3f9i_A 3-oxoacyl-[acyl-carrier 63.9 6.4 0.00022 36.8 4.6 77 71-152 14-93 (249)
449 1dih_A Dihydrodipicolinate red 63.9 12 0.00041 36.1 6.6 30 72-101 6-37 (273)
450 1fmc_A 7 alpha-hydroxysteroid 63.9 8.8 0.0003 35.8 5.6 33 71-103 11-44 (255)
451 2ew8_A (S)-1-phenylethanol deh 63.8 23 0.00078 33.0 8.6 34 71-104 7-41 (249)
452 2gcg_A Glyoxylate reductase/hy 63.7 30 0.001 34.2 9.7 34 70-103 154-187 (330)
453 1tlt_A Putative oxidoreductase 63.7 8.7 0.0003 37.6 5.7 116 71-202 5-122 (319)
454 1gee_A Glucose 1-dehydrogenase 63.6 9.3 0.00032 35.8 5.8 32 71-102 7-39 (261)
455 3hyw_A Sulfide-quinone reducta 63.5 6.2 0.00021 40.6 4.8 33 70-102 1-35 (430)
456 3tfo_A Putative 3-oxoacyl-(acy 63.5 11 0.00038 35.9 6.4 33 71-103 4-37 (264)
457 3ba1_A HPPR, hydroxyphenylpyru 63.4 35 0.0012 33.8 10.1 34 70-103 163-196 (333)
458 1yxm_A Pecra, peroxisomal tran 63.3 11 0.00039 36.2 6.5 33 71-103 18-51 (303)
459 2rkb_A Serine dehydratase-like 63.3 23 0.00077 34.7 8.7 99 71-196 54-153 (318)
460 2dbq_A Glyoxylate reductase; D 63.3 31 0.0011 34.1 9.8 34 69-102 148-181 (334)
461 2gv8_A Monooxygenase; FMO, FAD 63.1 7.2 0.00025 40.2 5.3 33 70-102 5-39 (447)
462 2fp4_A Succinyl-COA ligase [GD 63.1 22 0.00077 34.8 8.6 27 72-98 14-42 (305)
463 3op4_A 3-oxoacyl-[acyl-carrier 63.1 11 0.00037 35.4 6.1 75 71-152 9-92 (248)
464 4dgk_A Phytoene dehydrogenase; 63.0 5.7 0.00019 41.4 4.5 32 71-102 1-32 (501)
465 3ia7_A CALG4; glycosysltransfe 63.0 16 0.00056 36.2 7.8 32 71-102 4-40 (402)
466 2ew2_A 2-dehydropantoate 2-red 63.0 7.1 0.00024 37.8 4.9 31 71-101 3-33 (316)
467 1wma_A Carbonyl reductase [NAD 62.9 7.5 0.00026 36.5 5.0 33 71-103 4-38 (276)
468 4a2c_A Galactitol-1-phosphate 62.8 8.9 0.00031 37.9 5.7 77 69-152 159-238 (346)
469 1p0f_A NADP-dependent alcohol 62.8 10 0.00035 38.1 6.2 78 69-152 190-270 (373)
470 2gkg_A Response regulator homo 62.7 54 0.0018 25.8 9.8 54 69-151 3-57 (127)
471 4e4y_A Short chain dehydrogena 62.6 25 0.00087 32.5 8.6 71 71-152 4-79 (244)
472 3jtm_A Formate dehydrogenase, 62.6 18 0.00061 36.3 7.9 32 70-101 163-194 (351)
473 1ydw_A AX110P-like protein; st 62.6 7.5 0.00026 38.9 5.1 94 71-173 6-100 (362)
474 2csu_A 457AA long hypothetical 62.6 27 0.00094 36.3 9.6 101 71-177 8-130 (457)
475 3imf_A Short chain dehydrogena 62.6 11 0.00039 35.4 6.2 33 71-103 6-39 (257)
476 2j8z_A Quinone oxidoreductase; 62.5 6.3 0.00022 39.3 4.5 79 69-153 161-241 (354)
477 2dph_A Formaldehyde dismutase; 62.5 8.7 0.0003 39.0 5.7 79 69-153 184-264 (398)
478 4egf_A L-xylulose reductase; s 62.5 8.6 0.00029 36.6 5.3 33 71-103 20-53 (266)
479 3sc4_A Short chain dehydrogena 62.5 47 0.0016 31.6 10.8 35 71-105 9-44 (285)
480 3uce_A Dehydrogenase; rossmann 62.4 10 0.00035 34.8 5.7 61 71-152 6-68 (223)
481 2rh8_A Anthocyanidin reductase 62.3 8.9 0.0003 37.5 5.5 35 70-104 8-43 (338)
482 3pp8_A Glyoxylate/hydroxypyruv 62.3 9.8 0.00033 37.6 5.8 34 71-104 139-172 (315)
483 4g2n_A D-isomer specific 2-hyd 62.3 15 0.00053 36.7 7.3 32 70-101 172-203 (345)
484 4b7c_A Probable oxidoreductase 62.2 7 0.00024 38.5 4.8 77 69-152 148-227 (336)
485 4dqv_A Probable peptide synthe 62.2 20 0.00067 37.3 8.5 35 70-104 72-110 (478)
486 1iy8_A Levodione reductase; ox 62.2 17 0.00058 34.3 7.4 33 71-103 13-46 (267)
487 3av3_A Phosphoribosylglycinami 62.2 9.5 0.00033 35.4 5.3 76 72-152 4-92 (212)
488 1xq1_A Putative tropinone redu 62.1 12 0.0004 35.3 6.2 33 71-103 14-47 (266)
489 3okp_A GDP-mannose-dependent a 62.0 16 0.00054 36.1 7.4 98 71-170 4-111 (394)
490 2b69_A UDP-glucuronate decarbo 62.0 8.8 0.0003 37.7 5.5 35 69-103 25-60 (343)
491 3otg_A CALG1; calicheamicin, T 61.9 14 0.00049 36.9 7.2 33 71-103 20-57 (412)
492 4fcc_A Glutamate dehydrogenase 61.8 69 0.0024 33.1 12.2 111 71-202 235-372 (450)
493 3c24_A Putative oxidoreductase 61.8 9 0.00031 36.9 5.4 31 70-100 10-41 (286)
494 3moi_A Probable dehydrogenase; 61.6 5.7 0.00019 40.3 4.0 144 71-228 2-150 (387)
495 4eso_A Putative oxidoreductase 61.6 15 0.00051 34.6 6.8 34 70-103 7-41 (255)
496 3ctm_A Carbonyl reductase; alc 61.6 15 0.00052 34.8 6.9 35 71-105 34-69 (279)
497 2fzw_A Alcohol dehydrogenase c 61.6 11 0.00036 37.9 6.1 78 69-152 189-269 (373)
498 1v3u_A Leukotriene B4 12- hydr 61.4 13 0.00043 36.6 6.5 78 69-152 144-223 (333)
499 2ekl_A D-3-phosphoglycerate de 61.4 25 0.00086 34.5 8.6 34 69-102 140-173 (313)
500 3h8l_A NADH oxidase; membrane 61.4 7.4 0.00025 39.5 4.9 33 71-103 1-36 (409)
No 1
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=100.00 E-value=1.8e-93 Score=779.62 Aligned_cols=452 Identities=35% Similarity=0.566 Sum_probs=399.1
Q ss_pred CCCCCCCCEEEEEcCcHHHHHHHHHHHHc---------CCcEEEEecCCC--CCCchhhccCEEEEcCCCCCCCCCCCHH
Q 009316 65 LKVTCRQEKILVANRGEIAVRVIRTAHEM---------GIPCVAVYSTID--KDALHVKLADESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 65 ~~~~~~~~~iLI~~~g~ia~~ii~aa~~~---------Gi~~v~v~~~~d--~~~~~~~~ad~~~~i~~~~~~~sy~~~~ 133 (537)
.++.+||+||||+|||++|++|+++||++ |+++|++|++.| .+++++++||+++++++.+..++|+|++
T Consensus 50 ~~g~~~~~kvLIanrGeiA~riira~r~lG~e~f~~e~Gi~tVav~s~~D~~~~a~~~~~ADe~v~i~~~~~~~syld~~ 129 (587)
T 3jrx_A 50 FGGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVE 129 (587)
T ss_dssp TTCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHH
T ss_pred cCCCcccCEEEEECChHHHHHHHHHHHHhhhccccccCCceEEEEecccccCcCChhhHhCCEEEEeCCCCccccccCHH
Confidence 45678899999999999999999999987 799999998766 8999999999999999888889999999
Q ss_pred HHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCC---------
Q 009316 134 NVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD--------- 204 (537)
Q Consensus 134 ~i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~--------- 204 (537)
+|+++|++.++|+|||||||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+|++..
T Consensus 130 ~Il~~a~~~~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~ 209 (587)
T 3jrx_A 130 LIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTE 209 (587)
T ss_dssp HHHHHHHHTTCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC--
T ss_pred HHHHHHHHhCCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeecccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999843
Q ss_pred ------------------cCCCCHHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcE
Q 009316 205 ------------------GLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGV 266 (537)
Q Consensus 205 ------------------~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~v 266 (537)
..+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+..++ .+..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iGyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~~----~~~~v 285 (587)
T 3jrx_A 210 DDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPI 285 (587)
T ss_dssp ----CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHCSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHHS----TTCCE
T ss_pred cccccccccccchhhccccccCCHHHHHHHHHhcCCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhhc----cCCCE
Confidence 11788999999999999999999999999999999999999999999887653 35789
Q ss_pred EEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Q 009316 267 YLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFL 346 (537)
Q Consensus 267 lvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~ 346 (537)
+||+||+|++|++|++++|++|+++++++++|+++++++|.++++|++.++++.+++|.+.+.++++++||.|++++||+
T Consensus 286 lVEeyI~g~rei~V~vl~D~~G~vv~l~~rd~siqrr~qk~ie~aPa~~l~~~~~~~i~~~A~~~a~alGy~G~~~VEfl 365 (587)
T 3jrx_A 286 FLMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 365 (587)
T ss_dssp EEEECCCSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred EEEEecCCCcEEEEEEEEcCCCCEEEEeeeeccccccccceeEecCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred EeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCCCC--------------------CCccc--cccceeEE
Q 009316 347 LDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLR--------------------YKQED--IVLQGHSI 404 (537)
Q Consensus 347 ~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~l~--------------------~~~~~--~~~~g~ai 404 (537)
++++|++||||||||+|++|+++|+++|+|++++|+++++|++|+ +.|.+ +.++||||
T Consensus 366 ~d~dG~~yflEINpRl~~e~~vte~~tGvdlv~~~lria~G~pL~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~ghai 445 (587)
T 3jrx_A 366 YSQDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVI 445 (587)
T ss_dssp ECSSSCEEEEEEESSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCSSSCSSCCCCCSEEE
T ss_pred EeCCCCEEEEEEeCCCCCccceeccccCCCHHHHHHHHHCCCCcccchhcccccccccccccccccccccccCCCCceEE
Confidence 998899999999999999999999999999999999999999986 22222 56789999
Q ss_pred EEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEee-
Q 009316 405 ECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITG- 483 (537)
Q Consensus 405 ~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g- 483 (537)
+||||||||.++|.|++|+|+.+..|++++||....+..+..|+++||||+||||+||+||++|+++|.+||++++|+|
T Consensus 446 e~Ri~aedp~~~f~p~~G~i~~~~~~~~~~v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~ 525 (587)
T 3jrx_A 446 AARITSENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGD 525 (587)
T ss_dssp EEEEEC----------CCCCEEEECSSCTTEEEEECCC----------CCEEEEEEEESSHHHHHHHHHHHHHHHHHSST
T ss_pred EEeecccCccccCCCCCcEEEEEEeCCCCceEEeccccccCCcCcccCcccceEEEEcCCHHHHHHHHHHHHhccEEeCC
Confidence 9999999999999999999999999999999875554444469999999999999999999999999999999999999
Q ss_pred eccCHHHHHHhcCCccccCCcccccccccchhhccCC
Q 009316 484 VPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQAP 520 (537)
Q Consensus 484 ~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~~~ 520 (537)
++||++||++||.||+|++|+++|+||++++..+..+
T Consensus 526 ~~tn~~~~~~~~~~~~f~~g~~~t~~~~~~~~~~~~~ 562 (587)
T 3jrx_A 526 FRTTVEYLINLLETESFQNNDIDTGWLDYLIAEKVQA 562 (587)
T ss_dssp TSSTTHHHHHHHTSHHHHTTCSCCGGGGC--------
T ss_pred CCCcHHHHHHHhCChhhccCCcchhHHhHhhhhhccc
Confidence 8999999999999999999999999999998777533
No 2
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=100.00 E-value=1.1e-91 Score=762.97 Aligned_cols=445 Identities=35% Similarity=0.576 Sum_probs=374.5
Q ss_pred CCCCCCCCEEEEEcCcHHHHHHHHHHHHc---------CCcEEEEecCCC--CCCchhhccCEEEEcCCCCCCCCCCCHH
Q 009316 65 LKVTCRQEKILVANRGEIAVRVIRTAHEM---------GIPCVAVYSTID--KDALHVKLADESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 65 ~~~~~~~~~iLI~~~g~ia~~ii~aa~~~---------Gi~~v~v~~~~d--~~~~~~~~ad~~~~i~~~~~~~sy~~~~ 133 (537)
.++.+|||||||+|||++|++|+++||++ |+++|++|++.| .+++++++||+++++++.+..++|+|++
T Consensus 34 ~~~~~~~~kvLianrGeia~riira~r~lg~e~~~~e~gi~~Vav~s~~D~~~~a~~~~~ADe~~~i~~~~~~~sy~d~~ 113 (540)
T 3glk_A 34 FGGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVE 113 (540)
T ss_dssp TTCSCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHH
T ss_pred cCCcccccEEEEECChHHHHHHHHHHHHhccccccccCCcEEEEEEcCcccCcCChhHHhCCEEEEeCCCCcccccccHH
Confidence 35678899999999999999999999987 799999998666 8999999999999999888889999999
Q ss_pred HHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCC---------
Q 009316 134 NVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD--------- 204 (537)
Q Consensus 134 ~i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~--------- 204 (537)
+|+++|++.++|+|||+|||++|++.++++|++.|++|+||++++++.++||..+|++|+++|||+|++..
T Consensus 114 ~ii~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~ 193 (540)
T 3glk_A 114 LIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTE 193 (540)
T ss_dssp HHHHHHHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCC
T ss_pred HHHHHHHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999842
Q ss_pred ------------------cCCCCHHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcE
Q 009316 205 ------------------GLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGV 266 (537)
Q Consensus 205 ------------------~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~v 266 (537)
..+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+..+. .+..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~igyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~~----~~~~v 269 (540)
T 3glk_A 194 DDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPI 269 (540)
T ss_dssp TTC----CCCCCHHHHHHTSCCSHHHHHHHHHHHCSSEEEEETTCC----EEEECSTTTHHHHHHHHHHHS----TTCCE
T ss_pred cccccccccccccccccccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhhc----cCCCE
Confidence 11788999999999999999999999999999999999999999999887653 35789
Q ss_pred EEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Q 009316 267 YLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFL 346 (537)
Q Consensus 267 lvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~ 346 (537)
++|+||+|++|++|++++|++|+++++++++|+++++++|.++++|++.++++.+++|.+.+.++++++||.|++++||+
T Consensus 270 lVEe~I~g~rei~V~vl~d~~G~vv~l~~rd~s~qr~~~k~ie~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~VEf~ 349 (540)
T 3glk_A 270 FLMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 349 (540)
T ss_dssp EEEECCSSEEEEEEEEEECTTSCEEEEEEEEEEEC---CCSEEEESCTTSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred EEEEecCCCcEEEEEEEEcCCCCEEEEeceeeeeeecccceEEecCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEE
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred EeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCCCC--------------------CCcc--ccccceeEE
Q 009316 347 LDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLR--------------------YKQE--DIVLQGHSI 404 (537)
Q Consensus 347 ~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~l~--------------------~~~~--~~~~~g~ai 404 (537)
++++|++||||||||+|++|+++++++|+|++++|+++++|++|+ +.+. ++.++||||
T Consensus 350 ~d~dg~~~~lEiNpR~~~~~~vte~~tGvdl~~~~lr~a~G~pL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~ai 429 (540)
T 3glk_A 350 YSQDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVI 429 (540)
T ss_dssp EETTSCEEEEEEECSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCSSCCSCCCSCCC----CCCSEEE
T ss_pred EcCCCCEEEEEEECCCCCcchhhHhHhCCCHHHHHHHHHCCCCcccccccccccccccccccccccccccccCCCceeEE
Confidence 998899999999999999999999999999999999999999986 1222 256789999
Q ss_pred EEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEee-
Q 009316 405 ECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITG- 483 (537)
Q Consensus 405 ~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g- 483 (537)
+||||||||.++|.|++|+|+.+..|.+++|+....+..+..|+++||||+||||+||+||++|+++|.+||++++|+|
T Consensus 430 e~ri~aedp~~~f~p~~G~i~~~~~~~~~~v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~ 509 (540)
T 3glk_A 430 AARITSENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGD 509 (540)
T ss_dssp EEEEC------------CCEEECCCSSCCSEEEEEEC------------CEEEEEEEESSHHHHHHHHHHHHHHHTCC--
T ss_pred EEEEeccCCcccccCCceEEEEEEcCCCCcEEEEeccccCCCCCCccCcccceEEEEcCCHHHHHHHHHHHHhccEEecc
Confidence 9999999999999999999999999999999875555444469999999999999999999999999999999999999
Q ss_pred eccCHHHHHHhcCCccccCCcccccccccc
Q 009316 484 VPTTIEYHKLILDVEDFKNGKVDTAFIPKH 513 (537)
Q Consensus 484 ~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 513 (537)
++||++||++||.||+|++|+++|+||+++
T Consensus 510 ~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 539 (540)
T 3glk_A 510 FRTTVEYLINLLETESFQNNDIDTGWLDYL 539 (540)
T ss_dssp --HHHHHHHHHHHSHHHHHTCC--------
T ss_pred cCCcHHHHHHHhCChhhcCCCccchhhhhc
Confidence 899999999999999999999999999975
No 3
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=100.00 E-value=1.6e-91 Score=780.18 Aligned_cols=452 Identities=49% Similarity=0.800 Sum_probs=424.3
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
+||+||||+|||+++++++++|+++|+++++++++.|..+.+++++|+++++++.+..++|+|.++|++++++.++|+||
T Consensus 26 ~m~~kILI~g~Geia~~iiraar~lGi~~vav~s~~d~~a~~~~~AD~~~~i~~~~~~~syld~~~i~~~a~~~~~daI~ 105 (675)
T 3u9t_A 26 RSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGAKPADSYLRGDRIIAAALASGAQAIH 105 (675)
T ss_dssp CCCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHTCSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCchhHhhCCEEEEcCCCccccCccCHHHHHHHHHHhCcCEEE
Confidence 37899999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEee
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp 228 (537)
|+|||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+||++...+.+.+++.++++++|||+||||
T Consensus 106 pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~igyPvvvKp 185 (675)
T 3u9t_A 106 PGYGFLSENADFARACEEAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLLKA 185 (675)
T ss_dssp CCSSTTTTCHHHHHHHHTTTCEESSCCHHHHHHHTSHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSCSSBCCBC
T ss_pred eCCcccccCHHHHHHHHHcCCceeCCCHHHHHHhchHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCCCcEEEEE
Confidence 99999999999999999999999999999999999999999999999999999854457899999999999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeE
Q 009316 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 229 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~ 308 (537)
..|+||+||++|++.+|+.++++.+..++...|+++.+++|+||+|++|++++++.|++|+++++++|+|++++++++++
T Consensus 186 ~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEeyI~g~reiev~v~~d~~G~vv~l~~rd~s~qr~~qk~i 265 (675)
T 3u9t_A 186 AAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQRRHQKVV 265 (675)
T ss_dssp CC------CCCBCCTTTHHHHHSCCCC--------CCCBCCBCCSSCBCEEEEEEECSSSCEEEEEEEECCCBSSSSBCE
T ss_pred CCCCCCccEEEECCHHHHHHHHHHHHHHHHHhcCCCcEEEEeecCCCcEEEEEEEEcCCCCEEEEeccccceeeccceEE
Confidence 99999999999999999999999888777778888999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCC
Q 009316 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~ 388 (537)
+++|++.++++.+++|.+.+.++++++||.|++|+||+++++|++||||||||+|++|+++|+++|+|++++++++++|+
T Consensus 266 e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~dG~~~~iEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G~ 345 (675)
T 3u9t_A 266 EEAPAPGLGAELRRAMGEAAVRAAQAIGYVGAGTVEFLLDERGQFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVARGE 345 (675)
T ss_dssp EEESCSSCCHHHHHHHHHHHHHHHHHTTCCSEEEEECCBCTTSCBCBCEEESSCCTTHHHHHHTTTCCHHHHHHHHHTTC
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEcCCCCEEEEeccccccCCchhhhhhcCCCHHHHHHHHHCCC
Confidence 99999989999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred CCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecC-CCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHH
Q 009316 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPA-GGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREK 467 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~-~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~e 467 (537)
++++.+.++..+||+++||||+|||.++|.|++|+|+.+..| .++|||+|+++++|+.|+++||||+||||++|+|+++
T Consensus 346 ~l~~~~~~~~~~g~ai~~ri~aedp~~~f~P~~G~l~~~~~p~~~~gvr~d~~~~~G~~v~~~~ds~la~vi~~g~~r~~ 425 (675)
T 3u9t_A 346 ALPLTQEQVPLNGHAIEVRLYAEDPEGDFLPASGRLMLYREAAAGPGRRVDSGVREGDEVSPFYDPMLAKLIAWGETREE 425 (675)
T ss_dssp CCSCCTTTCCCCSEEEEEEEESCCTTTTSCCCCCBCSEEECCCCCTTEEEEESCCTTCBCCTTSCCEEEEEEEEESSHHH
T ss_pred CCCCCccccccCcceeEEEEEeccCcccccCCCCEEEEEECCCCCCCEEEEecccCCCEeCCCCCCceEEEEEEeCCHHH
Confidence 999888888999999999999999999999999999999888 7899999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhccCC
Q 009316 468 AIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQAP 520 (537)
Q Consensus 468 a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~~~ 520 (537)
|+++|++||++++|+|++||++||++|+.||+|++|+++|+||+++++++.++
T Consensus 426 a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 478 (675)
T 3u9t_A 426 ARQRLLAMLAETSVGGLRTNLAFLRRILGHPAFAAAELDTGFIARHQDDLLPA 478 (675)
T ss_dssp HHHHHHHHHHTCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHTHHHHSCC
T ss_pred HHHHHHHHhhcEEEECccCCHHHHHHHhCCHHHhCCCcccchhhhcchhhcCC
Confidence 99999999999999999999999999999999999999999999999887654
No 4
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=100.00 E-value=6e-92 Score=784.26 Aligned_cols=449 Identities=49% Similarity=0.818 Sum_probs=368.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
|||||||+|||+++++++++|+++|+++++++++.|.++++++++|+++++++.+..++|+|.+.|++++++.++|+|||
T Consensus 1 m~~kiLIanrGeia~riiraar~lGi~~vav~sd~d~~a~~~~~aD~~~~i~p~~~~~syld~~~i~~~a~~~~~daI~p 80 (681)
T 3n6r_A 1 MFNKILIANRGEIACRVIKTARKMGISTVAIYSDADKQALHVQMADEAVHIGPPPANQSYIVIDKVMAAIRATGAQAVHP 80 (681)
T ss_dssp -CCCBCBSCCHHHHHHHHHHHGGGSCCBCCEECSTTSSCHHHHHSSCCEECSSSSGGGTTSCHHHHHHHHHHTCCSCCBC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEEcCCCCCChhHHhCCEEEEcCCCCcccCccCHHHHHHHHHHhCcCEEEE
Confidence 68999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeec
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~ 229 (537)
+|||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||||.
T Consensus 81 g~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~igyPvVvKp~ 160 (681)
T 3n6r_A 81 GYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIKAS 160 (681)
T ss_dssp CSSSSTTCHHHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC---------------------------
T ss_pred CCCccccCHHHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcCCcEEEEEC
Confidence 99999999999999999999999999999999999999999999999999998545778999999999999999999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEE
Q 009316 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e 309 (537)
.|+||+||+++++.+|+.++++.+.+++...|+++.+++|+||+|++|++++++.|++|+++++++++|++++++++.++
T Consensus 161 ~ggggkGv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEe~I~g~rei~V~v~~d~~G~vv~l~~rd~s~qr~~~k~~e 240 (681)
T 3n6r_A 161 AGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECSIQRRNQKVVE 240 (681)
T ss_dssp ------------------------------------------CCSCEEEEEEEECCSSSCCEEEEEEECCCEETTEECEE
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCcEEEEEEEEeCCCCEEEEeeeecceeccCccEEE
Confidence 99999999999999999999999998888889999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCC
Q 009316 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 310 ~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~ 389 (537)
++|++.++++.+++|.+.+.++++++||.|++|+||+++++|++||||||||+|++|+++|+++|+|++++++++++|++
T Consensus 241 ~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~d~dg~~~~lEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G~~ 320 (681)
T 3n6r_A 241 EAPSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIVDGQKNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGEP 320 (681)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTSCCCCCEEECSCCTTHHHHHHHHTCCHHHHHHHHHTSCC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEeCCCCEEEEecccccCCCcHHhHHHhCCCHHHHHHHHHCCCC
Confidence 99999899999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCC-C-------------------CeEEEeeeccCCCccCC
Q 009316 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAG-G-------------------PFVRMDSHVYPDYVVPP 449 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~-~-------------------~~vr~d~~~~~G~~v~~ 449 (537)
+++.+.++...||++++|+|||||.++|.|++|+|+.+..|. + +|||+|+++++|+.|++
T Consensus 321 l~~~~~~~~~~g~ai~~ri~aedp~~~f~p~~G~i~~~~~p~~~~~~~~~~~~~w~~d~~~~~~~vr~d~~~~~g~~v~~ 400 (681)
T 3n6r_A 321 LSITQGDVKLTGWAIENRLYAEDPYRGFLPSIGRLTRYRPPAETAAGPLLVNGKWQGDAPSGEAAVRNDTGVYEGGEISM 400 (681)
T ss_dssp CSSCTTTCCCCSEEEEEEEESEEGGGTTEECCEECSCEECCCC--------------------CCEEEEESCCTTCEECT
T ss_pred CCCCccccceeEEEEEEEEecCCcccccCCCCcEEEEEECCCCCcccccccccccccccccCCCcEEEEccccCCCccCC
Confidence 999888899999999999999999999999999999998876 3 48999999999999999
Q ss_pred CCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhcc
Q 009316 450 SYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQ 518 (537)
Q Consensus 450 ~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~ 518 (537)
+||||+||||+||+||++|+++|.+||++++|+|++||++||++||.||+|++|+++|+||++++.++.
T Consensus 401 ~yd~~iak~i~~g~~r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~ 469 (681)
T 3n6r_A 401 YYDPMIAKLCTWAPTRAAAIEAMRIALDSFEVEGIGHNLPFLSAVMDHPKFISGDMTTAFIAEEYPEGF 469 (681)
T ss_dssp TSCCEEEEEEEEESSHHHHHHHHHHHHHHCEECSSCCSHHHHHHHHHCHHHHHCCCCSSHHHHHCTTSC
T ss_pred CCCCceeEEEEEcCCHHHHHHHHHHHHhcCEEECccCCHHHHHHHhCCHhhccCCcccchhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986653
No 5
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=100.00 E-value=8.4e-87 Score=713.57 Aligned_cols=445 Identities=53% Similarity=0.912 Sum_probs=429.1
Q ss_pred CCCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 67 ~~~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
..||||||||+|+|+++++++++|+++|+++++++++++..+++.+++|+.+++++.+..++|.|.++|++++++.++|+
T Consensus 2 n~m~~~kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~ 81 (446)
T 3ouz_A 2 NAMEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADA 81 (446)
T ss_dssp CTTCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSE
T ss_pred CccccceEEEECCCHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCE
Confidence 35789999999999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEE
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMI 226 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~Pvvv 226 (537)
|+|+|||++|+..+++.+++.|++++||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||
T Consensus 82 i~p~~g~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g~Pvvv 161 (446)
T 3ouz_A 82 IFPGYGFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVIL 161 (446)
T ss_dssp EECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHCSSEEE
T ss_pred EEECCcccccCHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999998433689999999999999999999
Q ss_pred eecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccce
Q 009316 227 KATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQK 306 (537)
Q Consensus 227 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k 306 (537)
||..|+||+||+++++.+|+.++++.+..++...|++..+++|+||+|++|++++++.|++|+++++++++|++++++++
T Consensus 162 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~d~~g~~~~~~~~~~~~~~~~~~ 241 (446)
T 3ouz_A 162 KAAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDSFGNVIHVGERDCSMQRRHQK 241 (446)
T ss_dssp EETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEE
T ss_pred EECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCCcEEEEEEEEcCCCCEEEEeeceeeeeecCce
Confidence 99999999999999999999999999998888889999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHc
Q 009316 307 LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAM 386 (537)
Q Consensus 307 ~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~ 386 (537)
..+.+|++.++++.++++.+.+.++++++||.|++++||+++++|++||+|||||++++|+++++++|+|++++++++++
T Consensus 242 ~~~~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve~~~~~~g~~~~iEiNpR~~g~~~~~~~~~G~dl~~~~~~~~~ 321 (446)
T 3ouz_A 242 LIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAE 321 (446)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEEEeCCCCEEEEEeECCCCCcceeeeeeeCCCHHHHHHHHHC
Confidence 99999998899999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHH
Q 009316 387 GGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (537)
Q Consensus 387 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ 466 (537)
|++++ .+.++..+||++++|+||||| ..|.|++|+++.+..|++++||+++++++|+.|+++|||++|+||++|+|++
T Consensus 322 G~~l~-~~~~~~~~g~ai~~ri~ae~~-~~~~p~~G~i~~~~~p~~~~vr~~~~~~~G~~v~~~~d~~~~~vi~~g~~~~ 399 (446)
T 3ouz_A 322 GYALP-SQESIKLNGHSIECRITAEDS-KTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPAYYDSMIGKLVVWAEDRN 399 (446)
T ss_dssp TCCCC-CGGGCCCCSEEEEEEEESBCT-TTCCBCCEECSEEECCCSTTEEEEECCCTTCEECTTTCCEEEEEEEEESSHH
T ss_pred CCCCC-cCCCCCcceEEEEEEeeccCC-CccCCCCcEEeEEecCCCCCEEEEcccccCCEeCCccCCcceEEEEEcCCHH
Confidence 99998 666778899999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccc
Q 009316 467 KAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKH 513 (537)
Q Consensus 467 ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 513 (537)
+|++++.+++++++|+|++||++||++||.||+|++|+++|+||+++
T Consensus 400 ~a~~~~~~al~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (446)
T 3ouz_A 400 KAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH 446 (446)
T ss_dssp HHHHHHHHHHHHCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHC
T ss_pred HHHHHHHHHHhhCEEeCccCCHHHHHHHhCChhhccCCccccccccC
Confidence 99999999999999999999999999999999999999999999874
No 6
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=8.1e-85 Score=759.10 Aligned_cols=449 Identities=45% Similarity=0.763 Sum_probs=415.4
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCC-CCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-PSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~-~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
+|++||||+|||+++++++++|+++|++++++++++|..+.+..++|+.+++++. ...++|+|+++|+++++++++|+|
T Consensus 2 ~~~kkVLIagrGeia~riiraa~elGi~vVav~s~~d~~s~~~~~ADe~~~ig~~~~~~~syld~~~Ii~~a~~~~~DaI 81 (1150)
T 3hbl_A 2 KQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAI 81 (1150)
T ss_dssp -CCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCGGGGTSSEEEECCTTSCTTGGGTCHHHHHHHHHHTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCcccchhhhhcceeeecCCCCCccccccCHHHHHHHHHHhCCCEE
Confidence 4689999999999999999999999999999999999999999999999999765 455799999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvK 227 (537)
||+|||++|++.+++.|+++|++|+||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++|||+|||
T Consensus 82 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iGyPvVVK 161 (1150)
T 3hbl_A 82 HPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMIK 161 (1150)
T ss_dssp ECTTTTSTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTCSSEEEE
T ss_pred EECCCcccccHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999995336788889989999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeecccccee
Q 009316 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~ 307 (537)
|..|+||+||++|++.+|+.++++.+.+++...|++..+++|+||+|++|++|++++|++|+++++++++|++++++++.
T Consensus 162 P~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a~~~fg~~~vlVEeyI~G~reieV~vl~d~~G~vv~l~er~~s~qr~~~k~ 241 (1150)
T 3hbl_A 162 ATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKV 241 (1150)
T ss_dssp CCC-------CEECCSSSCTHHHHSSSSSCC------CBEEECCCSSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEccCCCcEEEEEEEEeCCCCEEEEEeeccceeccCcee
Confidence 99999999999999999999999988766666788899999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcC
Q 009316 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 308 ~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G 387 (537)
++++|++.++++.+++|.+.+.++++++||.|++|+||+++++ ++||||||||+|++|+++|+++|+|++++++++++|
T Consensus 242 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~vEflvd~d-~~y~iEINpR~~g~~~vte~~tGvDlv~~~i~ia~G 320 (1150)
T 3hbl_A 242 VEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVSGD-EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAG 320 (1150)
T ss_dssp EEESSCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETT-EEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTT
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEECC-eEEEEEEeCCCCCCcceeehhcCCCHHHHHHHHHCC
Confidence 9999998899999999999999999999999999999999977 599999999999999999999999999999999999
Q ss_pred CCCCC------CccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeee-ccCCCccCCCCCCccEEEEE
Q 009316 388 GKLRY------KQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSH-VYPDYVVPPSYDSLLGKLIV 460 (537)
Q Consensus 388 ~~l~~------~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~-~~~G~~v~~~~ds~ig~vi~ 460 (537)
++++. .|.++..+||+++||+|+|||.++|.|++|+|+.+..|+++|||+|++ +++|+.|+++||||+||||+
T Consensus 321 ~~L~~~~~~~~~q~~i~~~G~ai~~Ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~v~~~yds~lakvi~ 400 (1150)
T 3hbl_A 321 ADLFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLST 400 (1150)
T ss_dssp CCTTSTTTCCCCGGGCCCCSEEEEEEECSEEGGGTSEECCCCCCEEECCCCTTEEEEESSCSSSCCCCTTSCCCSEEEEE
T ss_pred CCCCccccccccccccccceEEEEEEEeccCCccccCCCCceEEEEEcCCCCceeccccccccCCEeCCcCCCceeEEEE
Confidence 99875 567788899999999999999999999999999999999999999986 78999999999999999999
Q ss_pred EcCCHHHHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhcc
Q 009316 461 WAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQ 518 (537)
Q Consensus 461 ~g~~~~ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~ 518 (537)
||+|+++|+++|++||++++|+|++||++||++||.||+|++|+++|+||+++.+.+.
T Consensus 401 ~g~~~~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~ 458 (1150)
T 3hbl_A 401 HAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFIEETPELFD 458 (1150)
T ss_dssp EESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHHCHHHHHSCCCTTHHHHCGGGGC
T ss_pred EeCCHHHHHHHHHHHHhceEEeCccCCHHHHHHHhCCHHHcCCCcccchhhCCHhhcc
Confidence 9999999999999999999999999999999999999999999999999999876554
No 7
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=100.00 E-value=4.1e-81 Score=729.18 Aligned_cols=444 Identities=42% Similarity=0.722 Sum_probs=360.6
Q ss_pred CCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 68 ~~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
.+|||||||+|+|+++++++++|+++|+++++++++.|..+.+.+++|+.+++++.+..++|+|.++|+++++++++|+|
T Consensus 28 ~~m~kkILI~grGeia~~iiraar~lGi~vVaV~s~~d~~a~~~~~ADe~~~i~p~~~~~syld~~~Il~~a~~~~iDaI 107 (1236)
T 3va7_A 28 KKPFETVLIANRGEIAVRIMKTLKRMGIKSVAVYSDPDKYSQHVTDADFSVALHGRTAAETYLDIDKIINAAKKTGAQAI 107 (1236)
T ss_dssp CCSCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHHSSEEEECCCSSTTTTTTCHHHHHHHHHHTTCSEE
T ss_pred cCCCCEEEEEcCCHHHHHHHHHHHHCCCEEEEEEcCCCcCchhhhhCCEEEEeCCCcccccccCHHHHHHHHHHhCCCEE
Confidence 45789999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvK 227 (537)
||+|||++|+..+++.+++.|++++||++++++.++||..+|++|+++|||+||++ ..+.+.+++.++++++|||+|||
T Consensus 108 ~pg~g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~-~~v~s~eea~~~a~~iGyPvVVK 186 (1236)
T 3va7_A 108 IPGYGFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGS-GLIKDAKEAKEVAKKLEYPVMVK 186 (1236)
T ss_dssp ECCSSGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC--------------------------
T ss_pred EECCccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCee-EecCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999965 57788999999999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeecccccee
Q 009316 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~ 307 (537)
|..|+||+||++|++.+|+.++++.+..++...|++..++||+||+|++|++|+++.|++|+++++++++|++++++++.
T Consensus 187 P~~GgGGkGV~iv~s~eEL~~a~~~~~~~a~~~~~~~~vlVEeyI~G~rEisV~vl~Dg~g~vv~l~~rd~s~qr~~~k~ 266 (1236)
T 3va7_A 187 STAGGGGIGLQKVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNNARHVEIQMMGDGFGKAIAIGERDCSLQRRNQKV 266 (1236)
T ss_dssp ----------------------------------------------CCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhccCCCcEEEeeccCCCeEEEEEEEecCCceEEEEeeeeeeeeecCcce
Confidence 99999999999999999999999999887777788899999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC-CCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHc
Q 009316 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE-RGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAM 386 (537)
Q Consensus 308 ~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~-~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~ 386 (537)
++++|++.++++.+++|.+.+.++++++||.|++++||++++ +|++||||||||+|++|+++++++|+|++++++++++
T Consensus 267 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~VEfivd~d~g~~y~iEINpRl~g~~~~te~vtGvDlv~~~l~~a~ 346 (1236)
T 3va7_A 267 IEETPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFIYDEQRDEFYFLEVNARLQVEHPITEMVTGLDLVEWMLRIAA 346 (1236)
T ss_dssp EEEESCSSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCcEEEEEEECCCCCccHHHHHHHCCCHHHHHHHHHC
Confidence 999999889999999999999999999999999999999996 4779999999999999999999999999999999999
Q ss_pred CCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHH
Q 009316 387 GGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (537)
Q Consensus 387 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ 466 (537)
|+++++.+.++..+||++++|+|+|||.++|.|++|+++.+..|. ++|+|.++++|++|+++|||++|+||++|+|++
T Consensus 347 G~~l~~~~~~~~~~g~Ai~~riyaedp~~~f~p~~G~i~~~~~p~--gvrvd~~v~~G~~V~~~yds~la~vi~~g~~r~ 424 (1236)
T 3va7_A 347 NDSPDFDNTKIEVSGASIEARLYAENPVKDFRPSPGQLTSVSFPS--WARVDTWVKKGTNVSAEYDPTLAKIIVHGKDRN 424 (1236)
T ss_dssp TCCCCGGGCCCCCCSEEEEEEEESEETTTTTEECCEECCEEECCT--TSEEEECCCTTCEECSSSCCEEEEEEEEESSHH
T ss_pred CCCCCCccccccccceEEEEEEecCCcccccCCCCceEEEEEcCC--ccEecccccCCCEeCCCCCCceEEEEEEeCCHH
Confidence 999988777778899999999999999999999999999998775 499999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccch
Q 009316 467 KAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHE 514 (537)
Q Consensus 467 ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~ 514 (537)
+|+++++++|++++|+|++||++||++|+.||+|++|+++|+||+++.
T Consensus 425 eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~ 472 (1236)
T 3va7_A 425 DAIMKLNQALNETAVYGCITNIDYLRSIASSKMFKEAKVATKVLDSFD 472 (1236)
T ss_dssp HHHHHHHHHHHTCEEESSCCSHHHHHHHHHCHHHHHTCCCTTGGGGCC
T ss_pred HHHHHHHHHhhCEEEeCcccCHHHHHHHhCCHHHhCCCCcchhhhhcC
Confidence 999999999999999999999999999999999999999999999863
No 8
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=4.4e-79 Score=712.58 Aligned_cols=448 Identities=46% Similarity=0.766 Sum_probs=360.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCC-------CCCCCCCCHHHHHHHHHHc
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-------PSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~-------~~~~sy~~~~~i~~~a~~~ 142 (537)
||+||||+|||++|++++++|+++|++++++++++|..+.+..+||+++++++. ...++|+|+++|++++++.
T Consensus 13 ~~~~~lianrGeia~riiraa~elGi~vvav~s~~d~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~~~ 92 (1165)
T 2qf7_A 13 PISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAKLS 92 (1165)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHHHH
T ss_pred cceEEEEcCCcHHHHHHHHHHHHcCCEEEEEECCCcccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHHHh
Confidence 699999999999999999999999999999999999999999999999999764 4567899999999999999
Q ss_pred CCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCC
Q 009316 143 GCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGF 222 (537)
Q Consensus 143 ~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~ 222 (537)
++|+|||+|||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++||
T Consensus 93 ~iD~V~pg~g~lsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~igy 172 (1165)
T 2qf7_A 93 GADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAIGY 172 (1165)
T ss_dssp TCSEEECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC----------------------
T ss_pred CCCEEEECCCchhcCHHHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999842257888999999999999
Q ss_pred cEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeecc
Q 009316 223 PVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQR 302 (537)
Q Consensus 223 PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~ 302 (537)
|+||||..|+||+||++|++.+|+.++++.+.+++...|++..+++|+||++++|++|+++.|++|+++++++++|++++
T Consensus 173 PvVVKp~~g~GG~Gv~iv~s~eEL~~a~~~~~~~a~~~fg~~~vlVEefI~gg~EisV~vl~D~~G~vv~l~~r~~s~~r 252 (1165)
T 2qf7_A 173 PVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSVQR 252 (1165)
T ss_dssp -----------------------------------------------CCCSSEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEeccCCcEEEEEEEEcCCCcEEEEEeeccccee
Confidence 99999999999999999999999999999988877777888999999999977999999999999999999999999999
Q ss_pred ccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe-CCCCeEEEEEeccCCCcccchhhhcCCCHHHHH
Q 009316 303 RNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD-ERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQ 381 (537)
Q Consensus 303 ~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~-~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~ 381 (537)
++++.++++|++.++++.+++|.+.+.++++++||.|++++||+++ ++|++||||||||+|++|+++++++|+|+++++
T Consensus 253 ~~~~~~e~~Pa~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~vd~~dg~~~~iEiNpR~~~~~~vte~~tGiDl~~~~ 332 (1165)
T 2qf7_A 253 RNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKAQ 332 (1165)
T ss_dssp TTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHH
T ss_pred cccceEEecccccCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEECCCCCEEEEEEEcCCCCCchhhhhhhCCCHHHHH
Confidence 9999999999988999999999999999999999999999999999 888899999999999999999999999999999
Q ss_pred HHHHcCCCCCC------CccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeec-cCCCccCCCCCCc
Q 009316 382 IHVAMGGKLRY------KQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHV-YPDYVVPPSYDSL 454 (537)
Q Consensus 382 i~~a~G~~l~~------~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~-~~G~~v~~~~ds~ 454 (537)
+++++|.+++. .+.++..+||+++||+++|||.++|.|++|+|+.+..|.++++|+|.++ ++|+.|+++||++
T Consensus 333 i~~a~G~~l~~~~~g~p~q~~~~~~g~Ai~~ri~ae~P~~~f~p~~G~I~~~~~~~~~gvrvd~g~~~~G~~v~~~~d~~ 412 (1165)
T 2qf7_A 333 IHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDPEHNFIPDYGRITAYRSASGFGIRLDGGTSYSGAIITRYYDPL 412 (1165)
T ss_dssp HHHHTTCCTTSGGGTCCCGGGCCCCSEEEEEEEESEETTTTTEECCEECCEEECCCCTTEEEECCSCCTTCEECSSSCCE
T ss_pred HHHHcCCCccccccccccccccccCcEEEEEEEEecCCccCcCCCCcEEEEEecCCCCceEeeeccCCCCCEeCCCCCCc
Confidence 99999998862 3445667899999999999999999999999999988888899999876 7899999999999
Q ss_pred cEEEEEEcCCHHHHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhc
Q 009316 455 LGKLIVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (537)
Q Consensus 455 ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 517 (537)
+|+||++|+|+++|++++++++++++|+|++|||+||++++.||+|++|+++|+||+++.+.+
T Consensus 413 l~~vi~~g~t~~eA~~~~~~al~~i~i~G~~tni~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 475 (1165)
T 2qf7_A 413 LVKVTAWAPNPLEAISRMDRALREFRIRGVATNLTFLEAIIGHPKFRDNSYTTRFIDTTPELF 475 (1165)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHTSHHHHTTCCCTTTTTTCGGGG
T ss_pred eEEEEEEeCCHHHHHHHHHHHhhcEEEecccCCHHHHHHHhcCHHhhcCCccchhhhcChhhh
Confidence 999999999999999999999999999999999999999999999999999999999986554
No 9
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=100.00 E-value=5.2e-76 Score=630.78 Aligned_cols=447 Identities=54% Similarity=0.924 Sum_probs=419.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
||||||+|+|+++.+++++|+++|+++++++++.+..+++.+++|+.+.+++.....+|.|.++|++++++.++|+|+|+
T Consensus 1 ~k~ilI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 80 (451)
T 2vpq_A 1 MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPG 80 (451)
T ss_dssp -CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHTTCSEEECC
T ss_pred CceEEEeCCCHHHHHHHHHHHHcCCEEEEEecccccccchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEEC
Confidence 58999999999999999999999999999998888888899999999998876777899999999999999999999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecC
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~ 230 (537)
+|+++|++.+++.+++.|++++||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||||..
T Consensus 81 ~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~ 160 (451)
T 2vpq_A 81 YGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATA 160 (451)
T ss_dssp SSTTTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEETT
T ss_pred CCccccCHHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcCCcEEEEECC
Confidence 99999999899999999999999999999999999999999999999999973226789999999999999999999999
Q ss_pred CCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEEE
Q 009316 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEE 310 (537)
Q Consensus 231 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e~ 310 (537)
|+||+||+++++.+|+.++++.+..++...|++..+++|+||+|++|++++++.+++|+++++++++|+.++++++..+.
T Consensus 161 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 240 (451)
T 2vpq_A 161 GGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE 240 (451)
T ss_dssp CCTTCSEEEESSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCSEEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCeEEEEEEEEcCCCCEEEEeccccchhccccceEEE
Confidence 99999999999999999999998877666777889999999999789999999998899999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe-CCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCC
Q 009316 311 APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD-ERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 311 ~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~-~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~ 389 (537)
+|++.++++..+++.+.+.++++++||.|++++||+++ ++|++||+|||||+++++++++.++|+|++++++++++|.+
T Consensus 241 ~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~~ 320 (451)
T 2vpq_A 241 APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGDV 320 (451)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCCEEEEEeeCCCCCceehhhHHhCCCHHHHHHHHHCCCC
Confidence 99987999999999999999999999999999999999 88889999999999999999999999999999999999999
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHHH
Q 009316 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAI 469 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~ 469 (537)
++..+.++...++++++|+|+++|.++|.|++|+++.+..|..++++++.+++.|+.+++.|++++|+|+++|+|+++|+
T Consensus 321 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ea~ 400 (451)
T 2vpq_A 321 LPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAI 400 (451)
T ss_dssp CSCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCSEEECCCSTTEEEECCCCTTCBCCTTTCCEEEEEEEEESSHHHHH
T ss_pred CCCcccccCcCceEeeeEeeeeccccccCCCCCEEeEEECCCCCCcccccccccCCccCcccccccEEEEEEeCCHHHHH
Confidence 88766567778999999999999988899999999988777778999999999999999999999999999999999999
Q ss_pred HHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhc
Q 009316 470 ERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (537)
Q Consensus 470 ~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 517 (537)
++++++++.+.|+|++||++||+.++.||+|++|+++|+||++++..+
T Consensus 401 ~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
T 2vpq_A 401 MAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIMN 448 (451)
T ss_dssp HHHHHHHHTCEEESSCCSHHHHHHHHTCHHHHHTCCCTTTTTTSCTTC
T ss_pred HHHHHHHhccEEeCcCCCHHHHHHHhCCHhhhcCCCccHHHhhhhhhh
Confidence 999999999999999999999999999999999999999999976543
No 10
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=1e-75 Score=628.54 Aligned_cols=447 Identities=53% Similarity=0.887 Sum_probs=419.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
|+|||||+|+|+++.+++++|+++|+++++++++.+..+++.+++|+.+.++|. ...+|.|.++|++++++.++|+|+|
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~-~~~~~~d~~~l~~~~~~~~~d~v~~ 79 (451)
T 1ulz_A 1 MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTD-PLDTYLNKQRIINLALEVGADAIHP 79 (451)
T ss_dssp CCSSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECCSS-TTHHHHCHHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCcHHHHHHHHHHHHcCCeEEEEechhhcccchhhhCcEEEEcCCC-cccccCCHHHHHHHHHHcCCCEEEE
Confidence 679999999999999999999999999999998888888999999999988755 6668999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeec
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~ 229 (537)
++|+++|++.+++.+++.|++++||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||||.
T Consensus 80 ~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~ 159 (451)
T 1ulz_A 80 GYGFLAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVLLKAT 159 (451)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHCSSEEEEEC
T ss_pred CCCccccCHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999998311678999999999999999999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEE
Q 009316 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e 309 (537)
.|+||+||+++++.+|+.++++.+...+...|++..+++|+||+|++|++++++.+.+|+++++++++|+.++++++..+
T Consensus 160 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (451)
T 1ulz_A 160 AGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENPKHIEYQVLGDKHGNVIHLGERDCSIQRRNQKLVE 239 (451)
T ss_dssp SSSSCCSCEEESSHHHHHHHHHHHHHHHHHTTSCCCEEEEECCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEE
T ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCeEEEEEEEEcCCCCEEEEeeeeccccccccccee
Confidence 99999999999999999999999887777778888999999999988999999999889999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCC
Q 009316 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 310 ~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~ 389 (537)
.+|++.++++..+++.+.+.++++++||.|++++||+++++|++||+|||||+++++++++.++|+|++++++++++|.+
T Consensus 240 ~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~~ 319 (451)
T 1ulz_A 240 IAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEFIADQEGNLYFIEMNTRIQVEHPVSEMVTGIDIVKWQIKIAAGEP 319 (451)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTCC
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeCCCCEEEEEeeCCCCccchHHHHHhCCCHHHHHHHHHcCCC
Confidence 99997799999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHHH
Q 009316 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAI 469 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~ 469 (537)
+++.+.++...++++++++|+++|.++|.|.+|++..+..|..++++++.+++.|+.++++||+++|+|+++|+|+++|+
T Consensus 320 l~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ea~ 399 (451)
T 1ulz_A 320 LTIKQEDVKFNGYAIECRINAEDPKKNFAPSTRVIERYYVPGGFGIRVEHAAARGFEVTPYYDSMIAKLITWAPTWDEAV 399 (451)
T ss_dssp CCCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCCSEECCCSTTEEEEECCCTTCBCCSSSCCEEEEEEEEESSHHHHH
T ss_pred CCCccccCCCceEEEEEeccccCcccCcCCCCceeceEECCCCCCcccccCccCCCEecccccchheEEEEECCCHHHHH
Confidence 88666566778899999999999988899999999988777778899999999999999999999999999999999999
Q ss_pred HHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhc
Q 009316 470 ERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (537)
Q Consensus 470 ~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 517 (537)
++++++++.+.|+|+.|||++|+.||.||+|++|+++|+||+++++.+
T Consensus 400 ~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
T 1ulz_A 400 ERMRAALETYEITGVKTTIPLLINIMKEKDFKAGKFTTKYLEEHPEVF 447 (451)
T ss_dssp HHHHHHHHTCEECSSCCSHHHHHHHHHCHHHHHTCCCTTTTTTCGGGG
T ss_pred HHHHHHHhhcEEeCccCCHHHHHHHhCCHHHhcCCCcchhhhhhHhhc
Confidence 999999999999999999999999999999999999999999987654
No 11
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=100.00 E-value=5.3e-75 Score=624.72 Aligned_cols=449 Identities=47% Similarity=0.782 Sum_probs=414.8
Q ss_pred CCCCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCC-CCCCCCCCHHHHHHHHHHcCC
Q 009316 66 KVTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-PSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 66 ~~~~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~-~~~~sy~~~~~i~~~a~~~~~ 144 (537)
|..+|||||||+|+|+++.+++++|+++|+++++++++++..+++.+++|+.+.+++. ...++|.|.++|++++++.++
T Consensus 1 m~~~~~k~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~i 80 (461)
T 2dzd_A 1 METRRIRKVLVANRGEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDV 80 (461)
T ss_dssp --CCCCSEEEECSCHHHHHHHHHHHHHHTCEEEEEECGGGTTCTHHHHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTC
T ss_pred CCCCcCcEEEEECCcHHHHHHHHHHHHcCCEEEEEECCcccccchhhhCCEEEEcCCCCCccccccCHHHHHHHHHHhCC
Confidence 5667899999999999999999999999999999998888888899999999988643 334678999999999999999
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcE
Q 009316 145 TMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPV 224 (537)
Q Consensus 145 d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~Pv 224 (537)
|+|+|++|+++|++.+++.+++.|++++||++++++.++||..+|++|+++|||+|++....+.+.+++.++++++|||+
T Consensus 81 d~v~~~~g~~~E~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~Pv 160 (461)
T 2dzd_A 81 DAIHPGYGFLSENIQFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHGYPI 160 (461)
T ss_dssp CEEECCSSSSTTCHHHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHCSCE
T ss_pred CEEEECCCccccCHHHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcCCcE
Confidence 99999999999999999999999999999999999999999999999999999999983226789999999999999999
Q ss_pred EEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeecccc
Q 009316 225 MIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRN 304 (537)
Q Consensus 225 vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~ 304 (537)
||||..|+||+||+++++.+|+.++++.+..++...|++..+++|+||+|++|++++++.+++|+++.+.+++|+.++++
T Consensus 161 vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~ 240 (461)
T 2dzd_A 161 IIKAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSDEVYVEKLIENPKHIEVQILGDYEGNIVHLYERDCSVQRRH 240 (461)
T ss_dssp EEEESTTCSSSSEEEECCGGGHHHHHHHHHHHHHHHTSCCCEEEEECCCSCEEEEEEEEECTTCCEEEEEEEEEEEEETT
T ss_pred EEEeCCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEECCCCCeEEEEEEEEcCCCCEEEEEeccccccccc
Confidence 99999999999999999999999999998877667788889999999999889999999998899999899999999999
Q ss_pred ceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHH
Q 009316 305 QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 305 ~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~ 384 (537)
++..+++|++.++++..+++.+.+.++++++||.|++++||++++ |++||||||||+|++++++++++|+|++++++++
T Consensus 241 ~~~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~g~~~ve~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~ 319 (461)
T 2dzd_A 241 QKVVEVAPSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEFLVSG-DEFYFIEVNPRIQVEHTITEMITGIDIVQSQILI 319 (461)
T ss_dssp EEEEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEET-TEEEEEEEESSCCGGGHHHHHHHCCCHHHHHHHH
T ss_pred cceEEECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeC-CCEEEEEEECCCCCceeeEEeecCCCHHHHHHHH
Confidence 999999999779999999999999999999999999999999998 6699999999999999999999999999999999
Q ss_pred HcCCCCCCC------ccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeec-cCCCccCCCCCCccEE
Q 009316 385 AMGGKLRYK------QEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHV-YPDYVVPPSYDSLLGK 457 (537)
Q Consensus 385 a~G~~l~~~------~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~-~~G~~v~~~~ds~ig~ 457 (537)
++|++++.. +..+..+|+++++|+++++|..+|.|++|.+..+..+.++++++|..+ ..|++|+++||+++|+
T Consensus 320 ~~G~~l~~~~~~~~~~~~~~~~g~~~~~ri~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~~G~~i~~~~~~~~~~ 399 (461)
T 2dzd_A 320 ADGCSLHSHEVGIPKQEDIRINGYAIQSRVTTEDPLNNFMPDTGKIMAYRSGGGFGVRLDAGNGFQGAVITPYYDSLLVK 399 (461)
T ss_dssp HTTCCTTSTTTCCCCGGGCCCCSEEEEEEEESEEGGGTTEECCEECSEEECCCCTTEEEEESSCSTTCEECSSSCCEEEE
T ss_pred HcCCCccccccccccccccccceeEEEeeecccCCccCccCCCCeeeEEecCCCCCeEeecccccCCCCcCcccchhhhe
Confidence 999988632 222456899999999999998889999999998988888899998765 7899999999999999
Q ss_pred EEEEcCCHHHHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchh
Q 009316 458 LIVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQ 515 (537)
Q Consensus 458 vi~~g~~~~ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~ 515 (537)
|+++|+|+++|+++++++++.++|+|+.|||+++..++.||+|++|+++|+||+++.+
T Consensus 400 v~~~g~~~~~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (461)
T 2dzd_A 400 LSTWALTFEQAARKMLRNLREFRIRGIKTNIPFLENVVQHPKFLSGEYDTSFIDTTPE 457 (461)
T ss_dssp EEEEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHSHHHHTSCCCTTHHHHCGG
T ss_pred eEEEcCCHHHHHHHHHHHHHhcEEeCCcCCHHHHHHHhCChhhhCCCccchhhhcchh
Confidence 9999999999999999999999999999999999999999999999999999998743
No 12
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=100.00 E-value=6.9e-75 Score=636.73 Aligned_cols=444 Identities=33% Similarity=0.547 Sum_probs=405.0
Q ss_pred CCCCCCCEEEEEcCcHHHHHHHHHHHHc---------CCcEEEEecCC--CCCCchhhccCEEEEcCCCCCCCCCCCHHH
Q 009316 66 KVTCRQEKILVANRGEIAVRVIRTAHEM---------GIPCVAVYSTI--DKDALHVKLADESVCIGEAPSSQSYLLIPN 134 (537)
Q Consensus 66 ~~~~~~~~iLI~~~g~ia~~ii~aa~~~---------Gi~~v~v~~~~--d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~ 134 (537)
++.+|+|||||+|+|+++++++++|+++ |++++++++.. +..+++.++||+.+++++....++|.|.+.
T Consensus 42 ~~~~~~kkILI~g~g~~a~~iira~~~~G~~vi~~d~gi~~v~v~s~~D~~~~~~~~~~aD~~~~ip~~~~~~~y~d~~~ 121 (554)
T 1w96_A 42 GGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDL 121 (554)
T ss_dssp TCCBCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHH
T ss_pred CCcccccEEEEECCCHHHHHHHHHHHHcCCcceecccCceEEEEecccccccCChhhhhCCEEEEcCCCCccccccCHHH
Confidence 3456899999999999999999999999 56678888644 478889999999999977667789999999
Q ss_pred HHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCC--CceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCc-------
Q 009316 135 VLSAAISRGCTMLHPGYGFLAENAVFVEMCREHG--INFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG------- 205 (537)
Q Consensus 135 i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~G--l~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~------- 205 (537)
|+++++++++|+|+|++||++|++.++..++++| ++++||++++++.++||..++++|+++|||+|++...
T Consensus 122 l~~~a~~~~id~Vi~g~G~~sE~~~~~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~ 201 (554)
T 1w96_A 122 IVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHV 201 (554)
T ss_dssp HHHHHHHTTCSEEECCSSTTTTCTHHHHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEE
T ss_pred HHHHHHHhCCCEEEECCCccccCHHHHHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccc
Confidence 9999999999999999999999988999999999 9999999999999999999999999999999998421
Q ss_pred -----------------CCCCHHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 009316 206 -----------------LLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYL 268 (537)
Q Consensus 206 -----------------~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlv 268 (537)
.+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+..+. .+..++|
T Consensus 202 ~~~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g~PvVvKp~~g~gg~Gv~~v~~~~el~~a~~~~~~~~----~~~~vlv 277 (554)
T 1w96_A 202 DEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEI----PGSPIFI 277 (554)
T ss_dssp CTTTCCEECCHHHHGGGSCSSHHHHHHHHHHHCSSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHHS----TTCCEEE
T ss_pred cccccccccccccccccCCCCHHHHHHHHHHcCCCEEEEECCCCCCceEEEECCHHHHHHHHHHHHhhc----cCCCEEE
Confidence 1378899999999999999999999999999999999999999999887643 2478999
Q ss_pred EecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe
Q 009316 269 EKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD 348 (537)
Q Consensus 269 Ee~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~ 348 (537)
|+||+|++|++|+++.|++|++++++.++|+.++++++.++.+|++.++++..+++.+.+.++++++||.|++++||+++
T Consensus 278 Ee~i~g~~e~sv~vl~d~~G~vv~l~~~~~~~~~~~~k~~~~~P~~~l~~~~~~~i~~~a~~~~~alg~~G~~~ve~~~~ 357 (554)
T 1w96_A 278 MKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYS 357 (554)
T ss_dssp EECCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEC
T ss_pred EEecCCCcEEEEEEEEcCCCCEEEEeeeeeeeEeeccceeeeCCCcCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEE
Confidence 99999879999999999889999999999999999999999999987899999999999999999999999999999998
Q ss_pred -CCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCCCCCC-----------------------------ccccc
Q 009316 349 -ERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLRYK-----------------------------QEDIV 398 (537)
Q Consensus 349 -~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~l~~~-----------------------------~~~~~ 398 (537)
++|++||||||||++++++++++++|+|++++++++++|.++... +..+.
T Consensus 358 ~~dg~~~~iEiN~R~~g~~~~~~~~~G~dl~~~~~~~a~G~~l~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~ 437 (554)
T 1w96_A 358 HDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPI 437 (554)
T ss_dssp TTTCCEEEEEEECSCCTTTHHHHHHHCCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCTTCCSHHHHHHCCCCC
T ss_pred CCCCCEEEEEeeCCCCcceehhhhhcCCCHHHHHHHHHcCCCcccccchhhhccCCccccccccccccccccccccccCC
Confidence 788899999999999999999999999999999999999987421 11345
Q ss_pred cceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHHHHHHHHhhhc
Q 009316 399 LQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALND 478 (537)
Q Consensus 399 ~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~ 478 (537)
..||++++|+|+++|.++|.|++|++..+..|..++|+++.++.+|+.|+++||+++|+|+++|+|+++|++++.+++++
T Consensus 438 ~~g~~i~~r~~~~~~~~~~~p~~G~i~~~~~~~~~~v~~~~~~~~g~~i~~~~~~~~~~vi~~g~~~~eA~~~~~~al~~ 517 (554)
T 1w96_A 438 PKGHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKE 517 (554)
T ss_dssp CCSEEEEEEEEEECCCCSSCCCSSSEEEECCSSCSSEEEEEEECCSCSSCSSCSEEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEccCCCCCcccCCeEEeEEecCCCCCEEEeeecccCCccCCCCCCceEEEEEEeCCHHHHHHHHHHHHhc
Confidence 68999999999999999999999999998777778899988999999999999999999999999999999999999999
Q ss_pred ceEee-eccCHHHHHHhcCCccccCCcccccccccc
Q 009316 479 TIITG-VPTTIEYHKLILDVEDFKNGKVDTAFIPKH 513 (537)
Q Consensus 479 ~~i~g-~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 513 (537)
++|+| +.||++||+.||.||+|++|+++|+||++.
T Consensus 518 i~i~g~~~~~i~~~~~~~~~~~f~~~~~~t~~~~~~ 553 (554)
T 1w96_A 518 LSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDL 553 (554)
T ss_dssp HTTCC----CCHHHHHHHTSHHHHTTCCCTTHHHHH
T ss_pred cEEEeeccCCHHHHHHHhcCHhhhcCCccchHhhhh
Confidence 99999 999999999999999999999999999863
No 13
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=100.00 E-value=4.1e-74 Score=615.74 Aligned_cols=443 Identities=53% Similarity=0.916 Sum_probs=415.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
|||||||+|+|+++.+++++|+++|+++++++++.+..+++.+++|+.+.++|....++|.|.+++++++++.++|+|+|
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~ 80 (449)
T 2w70_A 1 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHP 80 (449)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEEC
T ss_pred CCceEEEeCCcHHHHHHHHHHHHcCCeEEEEeccccccCchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEE
Confidence 68999999999999999999999999999999888888899999999998876667778999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHH-HHHHHhcCCcEEEee
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA-VKLADELGFPVMIKA 228 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~-~~~~~~ig~PvvvKp 228 (537)
++|+++|++.+++.+++.|++++||++++++.++||..+|++|+++|||+|+++...+.+.+++ .++++++|||+||||
T Consensus 81 ~~g~~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g~PvvvKp 160 (449)
T 2w70_A 81 GYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA 160 (449)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEEEEE
T ss_pred CCCCcccCHHHHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhCCcEEEEE
Confidence 9999999998999999999999999999999999999999999999999999832267888898 889999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeE
Q 009316 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 229 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~ 308 (537)
..|+||+||+++++.+|+.++++.+...+...|++..+++|+||+|++|++|+++.+.+|++++++.++|+.++++++..
T Consensus 161 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 240 (449)
T 2w70_A 161 SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV 240 (449)
T ss_dssp TTCCTTTTCEEECSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEeccCCCeEEEEEEEEcCCCCEEEEeceecccccCCccee
Confidence 99999999999999999999999988776667888899999999998899999999988999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCC
Q 009316 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~ 388 (537)
+.+|++.++++..+++.+.+.++++++||.|++++||++++ |++||+|||||+++++++++.++|+|++++++++++|.
T Consensus 241 ~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~ 319 (449)
T 2w70_A 241 EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFEN-GEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQ 319 (449)
T ss_dssp EEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHHTC
T ss_pred eeCCcccCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEC-CCEEEEEEECCCCccchHHHHHhCCCHHHHHHHHHCCC
Confidence 99999779999999999999999999999999999999998 66999999999999999999999999999999999999
Q ss_pred CCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHH
Q 009316 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
++++.+.++...++++++++|+++| .+|.|.+|.+..+..|..++++++.+++.|+.+++++++++|+|+++|+|+++|
T Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~v~~~g~~~~~a 398 (449)
T 2w70_A 320 PLSIKQEEVHVRGHAVECRINAEDP-NTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVA 398 (449)
T ss_dssp CCSSCGGGCCCCSEEEEEEEECBCT-TTCCBCCEECCEEECCCSTTEEEECCCCTTCEECSSSCSEEEEEEEEESSHHHH
T ss_pred CCCCchhccccceeEEEEeecccCc-cccCCCCCEeceEECCCCCcEEEEeccccCCEeccccCcceEEEEEEcCCHHHH
Confidence 9876655566789999999999999 889999999988877777899999999999999999999999999999999999
Q ss_pred HHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccch
Q 009316 469 IERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHE 514 (537)
Q Consensus 469 ~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~ 514 (537)
+++++++++.++++|+.|||.+|+.||.||+|++|+++|+||++++
T Consensus 399 ~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (449)
T 2w70_A 399 IARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKL 444 (449)
T ss_dssp HHHHHHHHHHCEEESSCCSHHHHHHHHTCHHHHHCCCCTTHHHHHH
T ss_pred HHHHHHHHhhcEEeCcCCCHHHHHHHHcChhhccCCceehhhhhhh
Confidence 9999999999999999999999999999999999999999999864
No 14
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=100.00 E-value=8.3e-56 Score=467.07 Aligned_cols=386 Identities=16% Similarity=0.204 Sum_probs=325.7
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
++++||||+|+|+++++++++|+++|+++++++ .++.++++.+++|+.+.++ |.|.+++++++++.++|+|+
T Consensus 5 ~~~~~ilI~g~g~~~~~~~~a~~~~G~~~v~v~-~~~~~~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~v~ 76 (403)
T 4dim_A 5 YDNKRLLILGAGRGQLGLYKAAKELGIHTIAGT-MPNAHKPCLNLADEISYMD-------ISNPDEVEQKVKDLNLDGAA 76 (403)
T ss_dssp -CCCEEEEECCCGGGHHHHHHHHHHTCEEEEEE-CSSCCHHHHHHCSEEEECC-------TTCHHHHHHHTTTSCCSEEE
T ss_pred cCCCEEEEECCcHhHHHHHHHHHHCCCEEEEEc-CCCCCCcchhhCCeEEEec-------CCCHHHHHHHHHHcCCCEEE
Confidence 457899999999999999999999999999995 3556778899999999874 78999999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEee
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp 228 (537)
|+ |+.++...++++++++|++ ||++++++.++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||
T Consensus 77 ~~-~~~~~~~~~a~~~~~~gl~--g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp 151 (403)
T 4dim_A 77 TC-CLDTGIVSLARICDKENLV--GLNEEAAIMCGDKYKMKEAFKKYNVNTARH--FVVRNENELKNALENLKLPVIVKA 151 (403)
T ss_dssp CC-SCSTTHHHHHHHHHHHTCS--SCCHHHHHHHHCHHHHHHHHHHHTCCCCCE--ECCCSHHHHHHHHHTSCSSEEEEC
T ss_pred eC-CcchhHHHHHHHHHHcCcC--CCCHHHHHHHhCHHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHhcCCCCEEEEE
Confidence 97 6777778899999999984 999999999999999999999999999999 678999999999999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeec--cccce
Q 009316 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQ--RRNQK 306 (537)
Q Consensus 229 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~--~~~~k 306 (537)
..|+||+||+++++.+|+.++++.+.... .++.+++|+||+| .|+++.++.. +|++..+...+.... .+...
T Consensus 152 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~----~~~~~lvEe~i~g-~e~sv~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 225 (403)
T 4dim_A 152 TDLQGSKGIYIAKKEEEAIDGFNETMNLT----KRDYCIVEEFIEG-YEFGAQAFVY-KNDVLFVMPHGDETYMSHTAVP 225 (403)
T ss_dssp SCC-----CEEESSHHHHHHHHHHHHHHC----SSSCCEEEECCCS-EEEEEEEEEE-TTEEEEEEEEEEEEEESSSEEE
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHhcC----cCCcEEEEEccCC-cEEEEEEEEE-CCEEEEEEEecceeccCCCCcc
Confidence 99999999999999999999999887652 3578999999999 8999999975 567776543322111 11222
Q ss_pred eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcc-eeEEEEEEeCCCCeEEEEEeccCCCcc--cchhhhcCCCHHHHHHH
Q 009316 307 LLEEAPSPALTPELRKAMGDAAVAAAASIGYIG-VGTVEFLLDERGSFYFMEMNTRIQVEH--PVTEMISSVDLIEEQIH 383 (537)
Q Consensus 307 ~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G-~~~vEf~~~~~g~~~~lEiN~R~~g~~--~~~e~~tGidl~~~~i~ 383 (537)
.....|+. ++++..+++.+.+.++++++||.| ++|+||+++ +|++||+|||||+++++ .+++.++|+|+++++++
T Consensus 226 ~~~~~p~~-l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve~~~~-~~~~~~iEiN~R~~~~~~~~~~~~~~G~d~~~~~~~ 303 (403)
T 4dim_A 226 VGHYVPLD-VKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILK-DNEVYIIELTGRVGANCLPELVEINYGIEYYKMIAS 303 (403)
T ss_dssp EEEEESCC-SCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEE-TTEEEEEEEESSCCSTTHHHHHHHHHTSCHHHHHHH
T ss_pred eeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEEE-CCcEEEEEEcCCCCCCcHHHHHHHHhCcCHHHHHHH
Confidence 34456776 999999999999999999999996 999999998 46699999999999885 47889999999999999
Q ss_pred HHcCCCC-CCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCe--E-EEeeeccCCCccCCCCCC--ccEE
Q 009316 384 VAMGGKL-RYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPF--V-RMDSHVYPDYVVPPSYDS--LLGK 457 (537)
Q Consensus 384 ~a~G~~l-~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~--v-r~d~~~~~G~~v~~~~ds--~ig~ 457 (537)
+++|+++ ++.+......+ ++++|++. |.|.+|+++.+..+..++ + .++.++++|+.|+++||+ ++|+
T Consensus 304 ~~~G~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~G~i~~~~~~~~~~~~v~~~~~~~~~G~~v~~~~d~~~~~g~ 376 (403)
T 4dim_A 304 MAISENPLVFWSQKSKENK-AGLARMII------ETEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDCIGQ 376 (403)
T ss_dssp HHTTCCTHHHHTTCCSSCC-EEEEEEEC------CSSCCEEEEEEEECCCCCTTEEEEEECCCTTCEECCSCSGGGCCEE
T ss_pred HHcCCCccccccccccccc-cceEEEEE------ecCCCeEEEeeecccccCCCeEEEEEEcCCCCEeCCCCCCCceeEE
Confidence 9999988 44444333344 46788874 678899999987665443 3 356889999999999999 9999
Q ss_pred EEEEcCCHHHHHHHHHHhhhcceEe
Q 009316 458 LIVWAPTREKAIERMKRALNDTIIT 482 (537)
Q Consensus 458 vi~~g~~~~ea~~~~~~al~~~~i~ 482 (537)
||++|+|+++|++++++++++++|+
T Consensus 377 vi~~~~~~~~a~~~~~~~~~~~~i~ 401 (403)
T 4dim_A 377 IIVKEETLDKCKDKLDVIINNINII 401 (403)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEEEE
T ss_pred EEEEeCCHHHHHHHHHHHhccEEEE
Confidence 9999999999999999999999885
No 15
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=100.00 E-value=5.5e-51 Score=433.45 Aligned_cols=388 Identities=14% Similarity=0.174 Sum_probs=314.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCH----HHHHHHHHHcCCCE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLI----PNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~----~~i~~~a~~~~~d~ 146 (537)
.|+|+|+|+|.....|+++|+++|+++++++++++..+.+...+|+.+.++ .|.|. +.+.+++++.++|+
T Consensus 5 ~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~------~~~d~~~~~~~~~~~~~~~~id~ 78 (425)
T 3vot_A 5 NKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLP------LFEDEEAAMDVVRQTFVEFPFDG 78 (425)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEEC------TTTCHHHHHHHHHHHHHHSCCSE
T ss_pred CcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecC------CCCCHHHHHHHHHHhhhhcCCCE
Confidence 589999999999999999999999999999999988888888999998875 34454 45556677889999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEE
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMI 226 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~Pvvv 226 (537)
|+|..++. ....+.+++.+|++ ||++++++.++||..+|++|+++|||+|++ ..+.+.+++.+ +++|||+||
T Consensus 79 V~~~~e~~--~~~~a~l~e~lglp--g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~--~~~g~P~vv 150 (425)
T 3vot_A 79 VMTLFEPA--LPFTAKAAEALNLP--GLPFTTMENCRNKNKTRSILQQNGLNTPVF--HEFHTLADLEN--RKLSYPLVV 150 (425)
T ss_dssp EECCCGGG--HHHHHHHHHHTTCS--SCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEESSGGGGTT--CCCCSSEEE
T ss_pred EEECCchh--HHHHHHHHHHcCCC--CCCHHHHHHhhCHHHHHHHHHHCCCCCCce--eccCcHHHHHH--hhcCCcEEE
Confidence 99876442 24456778899987 899999999999999999999999999998 67788877643 579999999
Q ss_pred eecCCCCCcceEEeCCHHHHHHHHHHHHHHHH-----HhcCCCcEEEEecccCCcEEEEEEEEeCCCCE--EEEeeeeee
Q 009316 227 KATAGGGGRGMRLAKEPDEFVKLLQQAKSEAA-----AAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV--VHFGERDCS 299 (537)
Q Consensus 227 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~-----~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~v--v~~~~r~~s 299 (537)
||..|+||+||++|++.+|+.++++.+..... ...++..+++|+||+| +|++|+++.+ +|++ +.+..+.++
T Consensus 151 Kp~~g~gs~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i~G-~e~sv~~~~~-~g~~~~~~~~~~~~~ 228 (425)
T 3vot_A 151 KPVNGFSSQGVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFIDG-PEFAIETLSI-QGNVHVLSIGYKGNS 228 (425)
T ss_dssp EESCC-----CEEECSHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECCCS-CEEEEEEEEE-TTEEEEEEEEEEECC
T ss_pred EECCCCCCCCceEechHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEecC-cEEEEEEEEe-CCcEEEEeEEEEecc
Confidence 99999999999999999999999998765432 1234678999999999 8999999976 3454 444566666
Q ss_pred eccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCc-ceeEEEEEEeCCCCeEEEEEeccCCCc---ccchhhhcCC
Q 009316 300 IQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYI-GVGTVEFLLDERGSFYFMEMNTRIQVE---HPVTEMISSV 375 (537)
Q Consensus 300 ~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~-G~~~vEf~~~~~g~~~~lEiN~R~~g~---~~~~e~~tGi 375 (537)
....+......+|++ ++++..+++.+.+.++++++|+. |++|+||+++++|++||+|||||++|+ +.+++.++|+
T Consensus 229 ~~~~~~~~~~~~Pa~-l~~~~~~~i~~~~~~~~~alg~~~G~~~ve~~~~~dG~~~~iEiN~R~gG~~~~~~l~~~~~G~ 307 (425)
T 3vot_A 229 KGPFFEEGVYIAPAQ-LKEETRLAIVKEVTGAVSALGIHQGPAHTELRLDKDGTPYVIEVGARIGGSGVSHYIVKESTGI 307 (425)
T ss_dssp CCSBCCCCEEEESCC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEECTTCCEEEEEEESSCGGGGHHHHHHHHHHCC
T ss_pred CCCccccceEeeccc-CCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEEEeCCcEEEEEEecCCCCCCchHHHHHHHHCC
Confidence 667777778889997 99999999999999999999997 999999999999999999999999875 5688999999
Q ss_pred CHHHHHHHHHcCCCCCCCcc-ccccceeEEEEEEeeCCCCCCCCCCCceEEEEe----cCCCCeE-EEeeeccCCCccCC
Q 009316 376 DLIEEQIHVAMGGKLRYKQE-DIVLQGHSIECRINAEDPFKNFRPGPGIITAYL----PAGGPFV-RMDSHVYPDYVVPP 449 (537)
Q Consensus 376 dl~~~~i~~a~G~~l~~~~~-~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~----~~~~~~v-r~d~~~~~G~~v~~ 449 (537)
|+++++++.++|........ ......++....+. .+.+|++..+. ....|+| +++....+|+.|.+
T Consensus 308 d~~~~~i~~alg~~~~~~~~~~~~~~~~~~~~~~~--------~~~~G~~~~i~g~~~~~~~p~v~~~~~~~~~G~~v~~ 379 (425)
T 3vot_A 308 NFMQLVLQNALKPLESSEFEGEIRPVRTAGNYIIP--------VQGSGTFEKIDGLEEVKQRQEVKRVFQFMRRGAKILP 379 (425)
T ss_dssp CHHHHHHHHHHSCCCGGGSCSCCCCSSEEEEEECC--------CCSCEEEEEEETHHHHHTCTTEEEEEECCCTTCEECC
T ss_pred CHHHHHHHHHCCCccccccccccccceEEEEEEEc--------CCCCeEEEecCCHHHHhcCCCeEEEEEEecCCCEeCC
Confidence 99999999999975532211 12233444433332 24568888773 2235676 67888899999976
Q ss_pred C--CCCccEEEEEEcCCHHHHHHHHHHhhhcceEee
Q 009316 450 S--YDSLLGKLIVWAPTREKAIERMKRALNDTIITG 483 (537)
Q Consensus 450 ~--~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g 483 (537)
. +++++|+|+++|+|+++|.++++++++.++|..
T Consensus 380 ~~~~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~i~~ 415 (425)
T 3vot_A 380 YPHFSGYPGFILTSHHSYEECEAFYRELDDELHIIY 415 (425)
T ss_dssp TTCCCCCSEEEEEEESSHHHHHHHHHHHHHHCEEEE
T ss_pred CCCCCCeEEEEEEEECCHHHHHHHHHHHhCccEEEE
Confidence 4 556899999999999999999999999999963
No 16
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=2.2e-50 Score=471.49 Aligned_cols=412 Identities=20% Similarity=0.307 Sum_probs=345.3
Q ss_pred CCCEEEEEcCcHH-----------HHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHH
Q 009316 70 RQEKILVANRGEI-----------AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 70 ~~~~iLI~~~g~i-----------a~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~ 138 (537)
+++||||+|+|++ +.+++++|+++|+++++++++++....+..++|+.+ +.+ .+.+.+.++
T Consensus 6 ~~~kIlIig~G~i~ig~a~E~d~sg~~~~~al~~~G~~vv~v~~~~~~~~~~~~~ad~~~-i~p-------~~~e~i~~i 77 (1073)
T 1a9x_A 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATY-IEP-------IHWEVVRKI 77 (1073)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEE-CSC-------CCHHHHHHH
T ss_pred CCCEEEEECCCcccccccccccchHHHHHHHHHHcCCEEEEEeCCcccccCChhhCcEEE-ECC-------CCHHHHHHH
Confidence 4799999999986 678999999999999999888877778889999877 542 578999999
Q ss_pred HHHcCCCEEEeCCCc-ccccH--HHHH--HHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHH
Q 009316 139 AISRGCTMLHPGYGF-LAENA--VFVE--MCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA 213 (537)
Q Consensus 139 a~~~~~d~V~pg~g~-lsE~~--~~a~--~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~ 213 (537)
+++.++|+|+|++|+ ..++. .+++ .+++.|++++||++++++.+.||..+|++|+++|||+|++ ..+.+.+++
T Consensus 78 ~~~~~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~--~~v~~~~ea 155 (1073)
T 1a9x_A 78 IEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARS--GIAHTMEEA 155 (1073)
T ss_dssp HHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSE--EEESSHHHH
T ss_pred HHHhCCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCE--EEECCHHHH
Confidence 999999999999875 12221 2333 6789999999999999999999999999999999999999 678999999
Q ss_pred HHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEE
Q 009316 214 VKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHF 293 (537)
Q Consensus 214 ~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~ 293 (537)
.++++++|||+||||..|+||+|+.+++|.+|+.++++.+...+ ....+++|+||+|++|++++++.|.+|+++.+
T Consensus 156 ~~~~~~ig~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~~----~~~~vlvEe~I~G~~E~~v~v~~d~~g~~v~~ 231 (1073)
T 1a9x_A 156 LAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLS----PTKELLIDESLIGWKEYEMEVVRDKNDNCIIV 231 (1073)
T ss_dssp HHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHHC----TTSCEEEEECCTTSEEEEEEEEECTTCCEEEE
T ss_pred HHHHHHcCCCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhhC----CCCcEEEEEccCCCeEEEEEEEEeCCCCEEEE
Confidence 99999999999999999999999999999999999998776542 34689999999998899999999999998877
Q ss_pred eeeeee--eccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCc-ceeEEEEEEeC-CCCeEEEEEeccCCCcccch
Q 009316 294 GERDCS--IQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYI-GVGTVEFLLDE-RGSFYFMEMNTRIQVEHPVT 369 (537)
Q Consensus 294 ~~r~~s--~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~-G~~~vEf~~~~-~g~~~~lEiN~R~~g~~~~~ 369 (537)
...+.. ...+.++.+..+|++.++++..++|.+.+.++++++||. |.+++||++++ +|++||||||||+++++.++
T Consensus 232 ~~~e~~dp~~v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vdf~~~~~~g~~~viEiNpR~~~ss~l~ 311 (1073)
T 1a9x_A 232 CSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALA 311 (1073)
T ss_dssp EEEEESSCTTSCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTCCEEEEEEESSCCHHHHHH
T ss_pred EEEecccCCccccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceEEEEEEECCCCCEEEEEecCCCCccHHHH
Confidence 432210 001234567778997799999999999999999999999 99999999996 68899999999999999999
Q ss_pred hhhcCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeC-CCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccC
Q 009316 370 EMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAE-DPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVP 448 (537)
Q Consensus 370 e~~tGidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae-~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~ 448 (537)
++++|+|+++.++++++|.+++..+.. ++++ +|. .|.|+.+.+.. ..| ++.++.....+.++.
T Consensus 312 ~~atG~~l~~~~~~~a~G~~l~~~~~~-----------i~~~~~~a-~f~p~~~~v~~-~ip---~~~~~~~~~~~~~~~ 375 (1073)
T 1a9x_A 312 SKATGFPIAKVAAKLAVGYTLDELMND-----------ITGGRTPA-SFEPSIDYVVT-KIP---RFNFEKFAGANDRLT 375 (1073)
T ss_dssp HHHHSCCHHHHHHHHHTTCCGGGSBCT-----------TTTTCSBS-CSCCBCSSEEE-EEE---ECCGGGCTTSCCBCC
T ss_pred HHHhCCCHHHHHHHHHcCCChHHhhcc-----------ccCccCHH-HcccCCCcEEE-Ecc---cccccccCCCCcccC
Confidence 999999999999999999988644322 2333 453 68898887732 222 233444444567778
Q ss_pred CCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeeeccC--------HHHHHHhcCCcc----------ccCC-------
Q 009316 449 PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT--------IEYHKLILDVED----------FKNG------- 503 (537)
Q Consensus 449 ~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~tn--------~~~~~~~~~~~~----------f~~~------- 503 (537)
+.+++ +|+|+++|+|++||++|+.++++ +.+.|+.+| .+.+...|.+|. |+.|
T Consensus 376 ~~~~~-~G~v~~~g~~~~ea~~ka~~~l~-~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~~~a~~~g~~~~~~~ 453 (1073)
T 1a9x_A 376 TQMKS-VGEVMAIGRTQQESLQKALRGLE-VGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVF 453 (1073)
T ss_dssp SSCCC-CEEEEEEESSHHHHHHHHHHHSS-SSCSSSCCSSCTTCTTHHHHHHHHHHTCBTTHHHHHHHHHHTTBCHHHHH
T ss_pred CCccC-cEEEEEEcCCHHHHHHHHHHhhc-ccccCcCccccccccccHHHHHHHHhCCCccHHHHHHHHHHcCCCHHHHH
Confidence 88888 99999999999999999999998 889998855 678888888888 7888
Q ss_pred ---cccccccccc
Q 009316 504 ---KVDTAFIPKH 513 (537)
Q Consensus 504 ---~~~t~~~~~~ 513 (537)
.+|.+||++.
T Consensus 454 ~~~~i~~~f~~~~ 466 (1073)
T 1a9x_A 454 NLTNIDRWFLVQI 466 (1073)
T ss_dssp HHHCCCHHHHHHH
T ss_pred HhhccCHHHHHHH
Confidence 6778888763
No 17
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=100.00 E-value=1.6e-50 Score=421.02 Aligned_cols=356 Identities=16% Similarity=0.165 Sum_probs=280.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
||||+|+|+|..+..++++||++|++|++++ .++++++.++||+.++++ .+.+.+.++.++ .++|+|+|+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd--~~~~~~~~~~aD~~~~~~------~~~d~~~~~~~~--~~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVD--KNPQALIRNYADEFYCFD------VIKEPEKLLELS--KRVDAVLPV 70 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE--SCTTCTTTTTSSEEEECC------TTTCHHHHHHHH--TSSSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEe--CCCCChhHhhCCEEEECC------CCcCHHHHHHHh--cCCCEEEEC
Confidence 6999999999999999999999999999995 455677889999999886 356777887766 479999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecC
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~ 230 (537)
+|+.+++..+++.+++.|++ +||++++++.++||..+|++|+++|+|+|++ . .+|||+||||..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~-~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~--~-------------~ig~P~vvKp~~ 134 (363)
T 4ffl_A 71 NENLACIEFLNSIKEKFSCP-VLFDFEAYRISRDKKKSKDYFKSIGVPTPQD--R-------------PSKPPYFVKPPC 134 (363)
T ss_dssp CCCHHHHHHHHHHGGGCSSC-BCCCHHHHHHHTSHHHHHHHHHHTTCCCCCB--S-------------CSSSCEEEECSS
T ss_pred CCChhHHHHHHHHHHHCCCc-cCCCHHHHHHhhCHHHHHHHHHhcCCCCCCc--e-------------ecCCCEEEEECC
Confidence 99887777777778888876 5899999999999999999999999999987 2 368999999999
Q ss_pred CCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEEE
Q 009316 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEE 310 (537)
Q Consensus 231 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e~ 310 (537)
|+||+|+++++|.+++.. ....+++|+||+| +|++|+++.|+.+.++....+++..+..+++....
T Consensus 135 g~g~~gv~~v~~~~~~~~-------------~~~~~~~ee~i~g-~e~sv~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p 200 (363)
T 4ffl_A 135 ESSSVGARIIYDDKDLEG-------------LEPDTLVEEYVEG-EVVSLEVVGDGSHFAVVKETLVHIDETYDCHMVTP 200 (363)
T ss_dssp CCTTTTCEEEC------C-------------CCTTCEEEECCCS-EEEEEEEEEESSCEEECCCEEEEECTTSCEEEEEE
T ss_pred CCCCcCeEEeccHHHhhh-------------hccchhhhhhccC-cEEEEEEEEECCeEEEEEEEEeccCCcccceeecc
Confidence 999999999999988653 2478999999999 99999999998877777777777777766666544
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCccc-chhhhcCCCHHHHHHHHHcCCC
Q 009316 311 APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHP-VTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 311 ~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~-~~e~~tGidl~~~~i~~a~G~~ 389 (537)
+|. . +++.+.+.++++++||.|++++||+++++| +||+|||||+++.++ +++.++|+|++++++++++|.+
T Consensus 201 ~~~---~----~~~~~~a~~~~~~l~~~G~~~vef~~~~~~-~~viEiN~R~~g~~~~~~~~~~g~dl~~~~~~~~~g~~ 272 (363)
T 4ffl_A 201 LPA---N----PLFRQISHDLAANLPLKGIMDVEAIFGPKG-LRVIEIDARFPSQTPTVVYYSSGINLIELLFRAFTDGV 272 (363)
T ss_dssp CCC---C----HHHHHHHHHHHHTTTCEEEEEEEEEEETTE-EEEEEEECSCCSSHHHHHHHHHCCCHHHHHHHHTTTCC
T ss_pred hhH---H----HHHHHHHHHHHHhCCccceeeeeeEEeCCe-EEEEEEeCCCCCChHHHHHHHHCcCHHHHHHHHHCCCC
Confidence 433 3 467789999999999999999999999876 999999999998865 8999999999999999999998
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCC-CccCCCCCCccEEEEEEcCCHHHH
Q 009316 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPD-YVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G-~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
++.. .....++++.+++++++. ..+.|..+.+. ...+.+.. .+...+ +...+.+++++|+||+||+|++||
T Consensus 273 ~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~v~~vi~~G~~~~eA 344 (363)
T 4ffl_A 273 EEIR--AIPENKYCIYEHLMFGEN-GVLIPVGEQVL----SMGSDYGK-FYEEPGIEIFLCKGEYPVFTMVFWGKDREET 344 (363)
T ss_dssp CCC------CCCEEEEEEEEECGG-GBEEECCHHHH----TTCSEEEE-EEEETTEEEEEEESSSCEEEEEEEESSHHHH
T ss_pred CCcc--ccCCCceEEEEEEecCCC-CccCCCCceEE----ecCCCeeE-EEecCCCCCEecCCCCceEEEEEEECCHHHH
Confidence 7653 234556777777776543 22333322221 11122221 111111 112346788999999999999999
Q ss_pred HHHHHHhhhcceEe
Q 009316 469 IERMKRALNDTIIT 482 (537)
Q Consensus 469 ~~~~~~al~~~~i~ 482 (537)
++|++++++.++.+
T Consensus 345 ~~k~~~al~~i~~~ 358 (363)
T 4ffl_A 345 GAKRCKGLSVLKER 358 (363)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987643
No 18
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=100.00 E-value=1e-48 Score=411.14 Aligned_cols=380 Identities=17% Similarity=0.183 Sum_probs=304.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+++||||+|+|+++.+++++++++|++++++++.++ .+...++|+.+.++ |.|.+.+++++++.++|+|+|
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~d~~~~~~-------~~d~~~l~~~~~~~~~d~v~~ 80 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD--APAMHVAHRSHVIN-------MLDGDALRRVVELEKPHYIVP 80 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT--CGGGGGSSEEEECC-------TTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC--CchhhhccceEECC-------CCCHHHHHHHHHHcCCCEEEE
Confidence 358999999999999999999999999999976554 46778899988763 788999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHH-HHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEee
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETM-KNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l-~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp 228 (537)
++++..+ .+++.+++.|+ ++||++++++.++||..++++| +++|||+|++ ..+.+.+++.++++++|||+||||
T Consensus 81 ~~e~~~~--~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp 155 (391)
T 1kjq_A 81 EIEAIAT--DMLIQLEEEGL-NVVPCARATKLTMNREGIRRLAAEELQLPTSTY--RFADSESLFREAVADIGYPCIVKP 155 (391)
T ss_dssp CSSCSCH--HHHHHHHHTTC-EESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCE--EEESSHHHHHHHHHHHCSSEEEEE
T ss_pred CCCcCCH--HHHHHHHhCCC-CcCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCe--eeeCCHHHHHHHHHhcCCCEEEEe
Confidence 9887654 46778899999 5799999999999999999999 8999999998 678899999999999999999999
Q ss_pred cCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeE
Q 009316 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 229 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~ 308 (537)
..|+||+||+++++.+|+.++++.+...... .+..+++|+||++..|+++.++.++.| +..+...+. .........
T Consensus 156 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~g-~~~~~~~~~-~~~~~~~~~ 231 (391)
T 1kjq_A 156 VMSSSGKGQTFIRSAEQLAQAWKYAQQGGRA--GAGRVIVEGVVKFDFEITLLTVSAVDG-VHFCAPVGH-RQEDGDYRE 231 (391)
T ss_dssp SCC---CCCEEECSGGGHHHHHHHHHHHSGG--GCCCEEEEECCCCSEEEEEEEEEETTE-EEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEEecCCCeEEEEEEEEeCCC-eEEccCcce-EEECCEEEE
Confidence 9999999999999999999999887654211 257899999999449999999998665 332221111 111122223
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCC
Q 009316 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~ 388 (537)
...|++ ++++..+++.+.+.++++++||.|++++||+++++ ++||+|||||++++..++...+|+|++++++++++|.
T Consensus 232 ~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~~-~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~G~ 309 (391)
T 1kjq_A 232 SWQPQQ-MSPLALERAQEIARKVVLALGGYGLFGVELFVCGD-EVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGL 309 (391)
T ss_dssp EEECCC-CCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEEETT-EEEEEEEESSCCGGGGGHHHHBSSCHHHHHHHHHTTC
T ss_pred EEeCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCC-cEEEEEEECCCCCCcceeeeecCcCHHHHHHHHHcCC
Confidence 346876 89999999999999999999999999999999977 5999999999998766666667999999999999999
Q ss_pred CCCCCccccccceeEEEEEEeeCCCCCCCCCCC-ceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHH
Q 009316 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGP-GIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREK 467 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~-G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~e 467 (537)
+++. +...++++++++++++|.. .++. |... ... ||+.+..... ..+.+++++|+|+++|+|+++
T Consensus 310 ~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~-pg~~v~~~~~----~~~~~~~~lg~v~~~g~~~~~ 375 (391)
T 1kjq_A 310 PVGG----IRQYGPAASAVILPQLTSQ--NVTFDNVQN---AVG-ADLQIRLFGK----PEIDGSRRLGVALATAESVVD 375 (391)
T ss_dssp CCCC----CCBCSSEEEEEECCEEEES--SCEEECGGG---SCB-TTEEEEECCC----CCEEEECCCEEEEEECSSHHH
T ss_pred CCCC----ccccCcEEEEEEEccCccc--ccccccHHH---HhC-CCCEEEEecc----CCCCCCCeEEEEEEecCCHHH
Confidence 8752 3467789999999987632 2221 1111 112 4443322111 224567889999999999999
Q ss_pred HHHHHHHhhhcceEee
Q 009316 468 AIERMKRALNDTIITG 483 (537)
Q Consensus 468 a~~~~~~al~~~~i~g 483 (537)
|+++++++++.++|+|
T Consensus 376 a~~~~~~~~~~i~~~~ 391 (391)
T 1kjq_A 376 AIERAKHAAGQVKVQG 391 (391)
T ss_dssp HHHHHHHHHHHCEEEC
T ss_pred HHHHHHHHHhhheecC
Confidence 9999999999999873
No 19
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=100.00 E-value=3.2e-48 Score=413.15 Aligned_cols=390 Identities=16% Similarity=0.179 Sum_probs=302.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
++||||+|+|+++.+++++++++|++++++++.++ .+...++|+.+.++ |.|.+.+++++++.++|+|+|+
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~--~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~V~~~ 89 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYAN--APAMQVAHRSYVGN-------MMDKDFLWSVVEREKPDAIIPE 89 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTT--CHHHHHSSEEEESC-------TTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--ChhhhhcceEEECC-------CCCHHHHHHHHHHcCCCEEEEC
Confidence 57999999999999999999999999999976554 46778899988763 7889999999999999999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHH-HHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeec
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETM-KNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l-~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~ 229 (537)
+++.. ..+++.+++.|+ ++||++++++.++||..+|++| +++|||+|++ ..+.+.+++.++++++|||+||||.
T Consensus 90 ~e~~~--~~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 164 (433)
T 2dwc_A 90 IEAIN--LDALFEFEKDGY-FVVPNARATWIAMHRERLRETLVKEAKVPTSRY--MYATTLDELYEACEKIGYPCHTKAI 164 (433)
T ss_dssp SSCSC--HHHHHHHHHTTC-CBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCE--EEESSHHHHHHHHHHHCSSEEEEEC
T ss_pred cccCC--HHHHHHHHhcCC-eeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCe--eEeCCHHHHHHHHHhcCCCEEEEEC
Confidence 98765 356788899999 6799999999999999999999 8999999998 6788999999999999999999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeC--CCCEE--EEeeeeeeeccccc
Q 009316 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADK--YGNVV--HFGERDCSIQRRNQ 305 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~--~G~vv--~~~~r~~s~~~~~~ 305 (537)
.|+||+|++++++.+|+.++++.+...... .+..+++|+||++..|++|.++.+. +|+++ .+...+. ......
T Consensus 165 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~~~G~~~~~~~~~~~~-~~~~~~ 241 (433)
T 2dwc_A 165 MSSSGKGSYFVKGPEDIPKAWEEAKTKARG--SAEKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVGH-YQIDGD 241 (433)
T ss_dssp CC------EEECSGGGHHHHHHC-----------CCEEEEECCCCSEEEEECCEEEECTTSCEEEEEECCEEE-EESSSS
T ss_pred CCcCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEccCCCCeeEEEEEEecccCCCCEeEEEecccce-EEEcCE
Confidence 999999999999999999999877643211 2478999999994499999999876 67742 2221111 112223
Q ss_pred eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCccc--chhhhcCCCHHHHHHH
Q 009316 306 KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHP--VTEMISSVDLIEEQIH 383 (537)
Q Consensus 306 k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~--~~e~~tGidl~~~~i~ 383 (537)
......|++ ++++..+++.+.+.++++++||.|++++||+++++ ++||+|||||++++.. +...++|+|+++++++
T Consensus 242 ~~~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~-~~~viEiN~R~~~~~~~~~~~~~~g~~~~~~~~~ 319 (433)
T 2dwc_A 242 YHASWQPAE-ISEKAEREVYRIAKRITDVLGGLGIFGVEMFVKGD-KVWANEVSPRPHDTGMVTLASHPPGFSEFALHLR 319 (433)
T ss_dssp EEEEEESCC-CCHHHHHHHHHHHHHHHHHHCSSEECEEEEEEETT-EEEEEEEESSCCGGGGGHHHHSCTTCSHHHHHHH
T ss_pred EEEEEcCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCC-cEEEEEEeCCcCCCcceehhHhccCCCHHHHHHH
Confidence 334456887 99999999999999999999999999999999977 5999999999998743 4455679999999999
Q ss_pred HHcCCCCCC----CccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEE
Q 009316 384 VAMGGKLRY----KQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLI 459 (537)
Q Consensus 384 ~a~G~~l~~----~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi 459 (537)
+++|.++.. .+.++...++++++++++++|. ..++...+.. .-..|++.+.. +.+ ..+.+++++|+|+
T Consensus 320 ~~~G~~l~~~~~~~~~~~~~~~~a~~~~v~~~~~~--~~~~i~g~~~--~~~~pg~~v~~--~~~--~~~~~~~~lg~v~ 391 (433)
T 2dwc_A 320 AVLGLPIPGEWVDGYRLFPMLIPAATHVIKAKVSG--YSPRFRGLVK--ALSVPNATVRL--FGK--PEAYVGRRLGIAL 391 (433)
T ss_dssp HHHTCCCCCEEETTEEEECCSSCEEEEEEECSSCE--ESCEEECHHH--HTTSTTEEEEE--CCC--SEECTTCEEEEEE
T ss_pred HHcCCCCCcccccccccccccccEEEEEEEcCCCC--cCcCcchHHH--HhhCCCcEEEE--ecC--CCCCCCCeEEEEE
Confidence 999998763 1123556788999999998753 1121100111 12334544322 211 1135678899999
Q ss_pred EEcCCHHHHHHHHHHhhhcceEeeeccC
Q 009316 460 VWAPTREKAIERMKRALNDTIITGVPTT 487 (537)
Q Consensus 460 ~~g~~~~ea~~~~~~al~~~~i~g~~tn 487 (537)
++|+|+++|+++++++++.+.++|.+-+
T Consensus 392 ~~g~~~~ea~~~~~~~~~~i~~~~~~~~ 419 (433)
T 2dwc_A 392 AWDKDVEVAKRKAEMVAHMIELRTRSSD 419 (433)
T ss_dssp EECSSHHHHHHHHHHHHHTCEEECTTSC
T ss_pred EEeCCHHHHHHHHHHHHhheEEEeeccC
Confidence 9999999999999999999999986533
No 20
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=100.00 E-value=6.9e-48 Score=408.44 Aligned_cols=376 Identities=19% Similarity=0.203 Sum_probs=307.2
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
++.+||||+|+|+++++++++|+++|++++++ +++++++..+++|+.+.. +|.|.+++.++++ ++|+|+
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~--d~~~~~p~~~~ad~~~~~-------~~~d~~~l~~~a~--~~D~V~ 101 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVL--DPDPASPAGAVADRHLRA-------AYDDEAALAELAG--LCEAVS 101 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE--CSCTTCHHHHHSSEEECC-------CTTCHHHHHHHHH--HCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEE--CCCCcCchhhhCCEEEEC-------CcCCHHHHHHHHh--cCCEEE
Confidence 34689999999999999999999999999988 567778899999998853 5899999999994 599999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHh----cCCcE
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADE----LGFPV 224 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~----ig~Pv 224 (537)
+ +|...+..+++.+++. .++||++++++.+.||..+|++|+++|||+|++ ..+.+.+++.+++++ + ||+
T Consensus 102 ~--~~e~~~~~~~~~l~~~--~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~v~~~~e~~~~~~~~~~~~-~P~ 174 (419)
T 4e4t_A 102 T--EFENVPAASLDFLART--TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPH--VVIESAAALAALDDAALDAV-LPG 174 (419)
T ss_dssp E--CCTTCCHHHHHHHHTT--SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCE--EEECSHHHHHTSCHHHHHTT-CSE
T ss_pred E--ccCcCCHHHHHHHHcc--CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCe--EEECCHHHHHHHHHhhcccc-CCE
Confidence 5 4544567888888887 478999999999999999999999999999999 678999999988888 9 999
Q ss_pred EEeec-CCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccc
Q 009316 225 MIKAT-AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRR 303 (537)
Q Consensus 225 vvKp~-~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~ 303 (537)
||||. .|++|+|++++++.+|+.++++.+ ++..+++|+||++.+|+++.++.|.+|+++.+...+. .++.
T Consensus 175 VvKp~~~g~~G~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~Eisv~v~~~~~G~~~~~~~~e~-~~~~ 245 (419)
T 4e4t_A 175 ILKTARLGYDGKGQVRVSTAREARDAHAAL--------GGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQN-VHHN 245 (419)
T ss_dssp EEEESSSCCTTTTEEEECSHHHHHHHHHHT--------TTCCEEEEECCCEEEEEEEEEEECTTSCEEECCCEEE-EEET
T ss_pred EEEecCCCCCCCceEEECCHHHHHHHHHhc--------CCCcEEEeecCCCCeEEEEEEEEcCCCCEEEEeCeEE-EeeC
Confidence 99999 888999999999999999988653 4588999999997699999999999999887764321 1222
Q ss_pred cceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHH
Q 009316 304 NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIH 383 (537)
Q Consensus 304 ~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~ 383 (537)
.......+|++.++++..+++.+.+.++++++||.|++++||+++++|++||+|||||+++++++++.++|+|+++++++
T Consensus 246 g~~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~lg~~G~~~vE~~~~~dG~~~v~EiNpR~~~sg~~t~~~~~~s~~~~~~r 325 (419)
T 4e4t_A 246 GILALTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFEQQVR 325 (419)
T ss_dssp TEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHH
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEeCCCCEEEEEEeCCCCCCCCeEeeccCCCHHHHHHH
Confidence 22233367887789999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHcCCCCCCCccccccceeEEEEEEeeCCCCC-C--CCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEE
Q 009316 384 VAMGGKLRYKQEDIVLQGHSIECRINAEDPFK-N--FRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIV 460 (537)
Q Consensus 384 ~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~-~--f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~ 460 (537)
+++|.+++.. .....++++++..++... . -.+....+.. ....|++.+ ++|......+ ...+|+|++
T Consensus 326 a~~G~pl~~~----~~~~~~~m~n~lg~~~~~~~~~~~~~~~~~~~--~l~~p~~~~--~~ygk~~~~~--~rkmGhv~~ 395 (419)
T 4e4t_A 326 AMTRMPLGNP----RQHSPAAMLNILGDVWFPNGAAAGAVTPPWDT--VAAMPAAHL--HLYGKEEARV--GRKMGHVNF 395 (419)
T ss_dssp HHTTCCCCCC----CBCSCEEEEEEEGGGGCTTCGGGCCCCCCHHH--HHTSTTEEE--EECCCSCCCT--TCEEEEEEE
T ss_pred HHcCCCCCCc----cccCCeEEEEEecCccccccccccccchHHHH--HHhCCCCEE--EECCCCCCCC--CCceEEEEE
Confidence 9999998533 234457888888752110 0 0011111111 123466654 4554333433 456999999
Q ss_pred EcCCHHHHHHHHHHhhhcceE
Q 009316 461 WAPTREKAIERMKRALNDTII 481 (537)
Q Consensus 461 ~g~~~~ea~~~~~~al~~~~i 481 (537)
.|+|.++|+++++++.+.++|
T Consensus 396 ~~~~~~~~~~~a~~~~~~l~~ 416 (419)
T 4e4t_A 396 TAEMRDDAVAAATACAQLLRV 416 (419)
T ss_dssp ECSSHHHHHHHHHHHHHHHTC
T ss_pred EeCCHHHHHHHHHHHHHhcCc
Confidence 999999999999999988765
No 21
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-47 Score=399.00 Aligned_cols=360 Identities=19% Similarity=0.259 Sum_probs=298.0
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCC
Q 009316 73 KILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 73 ~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~g 152 (537)
||||+|+|.++++++++++++|+++++++++ ...+...++|+ +.+ +|.|.+++++++ .++|+|+|+++
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~--~~~~~~~~a~~-~~~-------~~~d~~~l~~~~--~~~d~v~~~~e 68 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPS--PEACAGQVGEL-VVG-------EFLDEGALLRFA--EGLALVTYEFE 68 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEESC--TTCGGGGTSEE-EEC-------CTTCHHHHHHHH--TTCSEEEECCT
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEeCC--CCChHHHhhce-Eec-------CCCCHHHHHHHH--hCCCEEEECCC
Confidence 5999999999999999999999999999654 34556678887 543 588999999999 68999999987
Q ss_pred cccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCC
Q 009316 153 FLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGG 232 (537)
Q Consensus 153 ~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~ 232 (537)
+. +..+++.+++.| ++||+++++..++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||..|+
T Consensus 69 ~~--~~~~~~~l~~~g--~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~~~~ 142 (369)
T 3aw8_A 69 NV--PVEAARRLEGRL--PLYPPAKALEVAQDRLREKTFFQGLGVPTPPF--HPVDGPEDLEEGLKRVGLPALLKTRRGG 142 (369)
T ss_dssp TC--CHHHHHHHHHHS--CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCE--EEESSHHHHHHHHTTTCSSEEEEECCC-
T ss_pred Cc--CHHHHHHHHHcC--CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCc--eeeCCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 64 467788889999 67999999999999999999999999999998 6789999999999999999999999999
Q ss_pred -CCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEEEc
Q 009316 233 -GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEA 311 (537)
Q Consensus 233 -gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e~~ 311 (537)
||+||+++++.+|+.++++.+ ++..+++|+||++++|++++++.|++|+++.+... +..++.+......+
T Consensus 143 ~~g~Gv~~v~~~~el~~~~~~~--------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~-~~~~~~~~~~~~~~ 213 (369)
T 3aw8_A 143 YDGKGQALVRTEEEALEALKAL--------GGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLV-ENRHWGGILRLSLA 213 (369)
T ss_dssp -----EEEECSHHHHHHHHTTT--------CSSSEEEEECCCCSEEEEEEEEECTTSCEEECCCE-EEEEETTEEEEEEE
T ss_pred CCcceEEEECCHHHHHHHHHhc--------CCCcEEEEEcCCCCEEEEEEEEECCCCCEEEECCe-eeeeeCCEEEEEEC
Confidence 999999999999999888654 35789999999933999999999988888776543 34455556666788
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCCCC
Q 009316 312 PSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLR 391 (537)
Q Consensus 312 P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~l~ 391 (537)
|++.++++..+++.+.+.++++++||.|++++||++++ |++||+|||||+++++..++..+|+|+++.+++.++|.+++
T Consensus 214 p~~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~g~~l~ 292 (369)
T 3aw8_A 214 PAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVG-EELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPLG 292 (369)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEEC-CcEEEEEEeCCcCCccceeeeeecCCHHHHHHHHHcCCCCC
Confidence 98778999999999999999999999999999999998 67999999999999888888899999999999999999886
Q ss_pred CCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHHHHH
Q 009316 392 YKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIER 471 (537)
Q Consensus 392 ~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~~~ 471 (537)
.. ...++++++++++++| + +..+. ..|++ +.+++.+ .+++ .+++|+|+++|+|+++|+++
T Consensus 293 ~~----~~~~~~~~~~~~~~~~--------~-~~~~~--~~p~~--~~~~~g~-~~~~--~~~lg~v~~~g~~~~ea~~~ 352 (369)
T 3aw8_A 293 ST----APRGQSAMVNLIGEKP--------P-FAEVL--KVEGA--HLHWYGK-AVRP--GRKVGHITLRRDGLKALEEG 352 (369)
T ss_dssp CC----CBCSEEEEEEEESCCC--------C-HHHHH--TSTTE--EEEECCC-CCCT--TCEEEEEEEEESSHHHHHHH
T ss_pred Cc----cccccEEEEEEeCCCc--------h-HHHhc--cCCCc--EEEEecC-CCCC--CCeEEEEEEEcCCHHHHHHH
Confidence 43 2346788999998762 1 11111 12444 3344433 3333 36799999999999999999
Q ss_pred HHHhhhcce
Q 009316 472 MKRALNDTI 480 (537)
Q Consensus 472 ~~~al~~~~ 480 (537)
++++++.+.
T Consensus 353 ~~~~~~~i~ 361 (369)
T 3aw8_A 353 LARLSRLVS 361 (369)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHHHhh
Confidence 999999876
No 22
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=100.00 E-value=1.8e-46 Score=395.93 Aligned_cols=370 Identities=19% Similarity=0.243 Sum_probs=304.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
.+||+|+|+|+++.+++++|+++|+++++++ +.+++..+++| ..+. .+|.|.+++.+++++ +|+|.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d---~~~~p~~~~ad~~~~~~-------~~~~d~~~l~~~a~~--~d~i~ 91 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD---ADNSPAKQISAHDGHVT-------GSFKEREAVRQLAKT--CDVVT 91 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE---STTCTTGGGCCSSCCEE-------SCTTCHHHHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE---CCCCcHHHhccccceee-------cCCCCHHHHHHHHHh--CCEEE
Confidence 6899999999999999999999999999996 35566778888 4443 269999999999965 89998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCC--CHHHHHHHHHhcCCcEEE
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQ--STEEAVKLADELGFPVMI 226 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~--~~~~~~~~~~~ig~Pvvv 226 (537)
+.++. -...+++.+++ |++ +||++++++.+.||..+|++|+++|||+|++ ..+. +.+++.++++++|||+||
T Consensus 92 ~e~e~--~~~~~l~~l~~-g~~-v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~~~g~P~Vv 165 (403)
T 3k5i_A 92 AEIEH--VDTYALEEVAS-EVK-IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEH--RELVENTPAELAKVGEQLGYPLML 165 (403)
T ss_dssp ESSSC--SCHHHHHHHTT-TSE-ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCE--EEESSCCHHHHHHHHHHHCSSEEE
T ss_pred ECCCC--CCHHHHHHHHc-CCc-cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCE--EEEcCCCHHHHHHHHHHhCCCEEE
Confidence 75433 24677888888 998 7999999999999999999999999999999 6677 999999999999999999
Q ss_pred eecCCC-CCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccc
Q 009316 227 KATAGG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQ 305 (537)
Q Consensus 227 Kp~~g~-gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~ 305 (537)
||..|+ +|+|++++++.+|+.++++.+ ++..+++|+||++++|+++.++.+++| +......+..++.+.
T Consensus 166 Kp~~gg~~g~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~E~sv~v~~~~~g--~~~~p~~~~~~~~g~ 235 (403)
T 3k5i_A 166 KSKTMAYDGRGNFRVNSQDDIPEALEAL--------KDRPLYAEKWAYFKMELAVIVVKTKDE--VLSYPTVETVQEDSI 235 (403)
T ss_dssp EESSSCCTTTTEEEECSTTSHHHHHHHT--------TTSCEEEEECCCEEEEEEEEEEECSSC--EEECCCEEEEEETTE
T ss_pred EeCCCCcCCCCEEEECCHHHHHHHHHhc--------CCCcEEEecCCCCCeEEEEEEEEcCCC--EEEeCCeeeEEeCCE
Confidence 999998 999999999999999988753 357899999999669999999999887 445555566777777
Q ss_pred eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHH
Q 009316 306 KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 306 k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a 385 (537)
......|++.++++..+++.+.+.+++++|||.|++++||+++++|++||+|||||++++..++...+|+|+++++++++
T Consensus 236 ~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve~~~~~dg~~~v~EiNpR~~~sg~~~~~~~~~s~~~~~~ra~ 315 (403)
T 3k5i_A 236 CKLVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLEDDSIMLCEIASRIHNSGHYTIEGCALSQFDAHLRAI 315 (403)
T ss_dssp EEEEEESCSSCCHHHHHHHHHHHHHHHHTSCCSEEEEEEEEEETTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCcEEEEEeecCCCCCCceeeeecCCCHHHHHHHHH
Confidence 77788898779999999999999999999999999999999998899999999999998644555668999999999999
Q ss_pred cCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCH
Q 009316 386 MGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTR 465 (537)
Q Consensus 386 ~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~ 465 (537)
+|.+++.. .....+.++++++.+++... +....+. ..-..|++.+ ++|......+ .+.+|+|++.|+|.
T Consensus 316 ~G~pl~~~--~~~~~~~a~m~nilg~~~~~---~~~~~~~--~~~~~p~~~~--~~ygk~~~~~--~rkmGhv~~~~~~~ 384 (403)
T 3k5i_A 316 LDLPIPAQ--SLEIRQPSIMLNIIGGAAPD---THLQAAE--CALSIPNASI--HLYSKGAAKP--GRKMGHITVTAPTM 384 (403)
T ss_dssp TTCCCCGG--GGSBSSCEEEEEEECCSSSS---HHHHHHH--HHTTSTTEEE--EECCCCSCCT--TCEEEEEEEECSSH
T ss_pred cCCCCCcc--cccCCCcEEEEEEecCCccc---cchhHHH--HHhcCCCCEE--EECCCCCCCC--CCeeEEEEEEcCCH
Confidence 99987532 23345578999999865321 0000111 1123466653 5554434444 46799999999999
Q ss_pred HHHHHHHHHhhhcc
Q 009316 466 EKAIERMKRALNDT 479 (537)
Q Consensus 466 ~ea~~~~~~al~~~ 479 (537)
++|+++++++++.+
T Consensus 385 ~~~~~~a~~~~~~~ 398 (403)
T 3k5i_A 385 HEAETHIQPLIDVV 398 (403)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998754
No 23
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=100.00 E-value=2e-45 Score=384.98 Aligned_cols=369 Identities=19% Similarity=0.256 Sum_probs=291.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
||||||+|+|..+..++++++++|+++++++++++ .+...++|..+.+ ++.|.+.+.+++ .++|+|+|+
T Consensus 1 M~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~~~~~~~-------~~~d~~~l~~~~--~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPR--SPAGQVADEQIVA-------GFFDSERIEDLV--KGSDVTTYD 69 (380)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT--CTTGGGSSEEEEC-------CTTCHHHHHHHH--HTCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC--CchhhhCceEEEC-------CCCCHHHHHHHH--hcCCEEEec
Confidence 47999999999999999999999999999965444 3456788887765 378899999998 579999998
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecC
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~ 230 (537)
++... ..+++.+++.|++ +||+++++..+.||..++++|+++|||+|++ ..+.+.++ ++++++||+||||..
T Consensus 70 ~e~~~--~~~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~---~~~~~~~P~vvKp~~ 141 (380)
T 3ax6_A 70 LEHID--VQTLKKLYNEGYK-IHPSPYTLEIIQDKFVQKEFLKKNGIPVPEY--KLVKDLES---DVREFGFPVVQKARK 141 (380)
T ss_dssp CSCSC--HHHHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHHTTCCCCCE--EECSSHHH---HHHTTCSSEEEEESC
T ss_pred ccCCC--HHHHHHHHHCCCe-ECCCHHHHHHhcCHHHHHHHHHHcCCCCCCe--EEeCCHHH---HHHhcCCCEEEEecC
Confidence 76432 5677888999998 5799999999999999999999999999998 67788776 667899999999999
Q ss_pred CC-CCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeee--cccccee
Q 009316 231 GG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSI--QRRNQKL 307 (537)
Q Consensus 231 g~-gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~--~~~~~k~ 307 (537)
|+ ||+|++++++.+|+.++++ ..+++|+||++++|+++.++.+++|+++.+...+ .. ++.+...
T Consensus 142 ~~y~g~Gv~~v~~~~el~~~~~------------~~~lvEe~i~~g~e~sv~~~~~~~G~~~~~~~~~-~~~~~~~~~~~ 208 (380)
T 3ax6_A 142 GGYDGRGVFIIKNEKDLENAIK------------GETYLEEFVEIEKELAVMVARNEKGEIACYPVVE-MYFDEDANICD 208 (380)
T ss_dssp CC-----EEEECSGGGGGGCCC------------SSEEEEECCCEEEEEEEEEEECSSCCEEEEEEEE-EC--------C
T ss_pred CCCCCCCeEEECCHHHHHHHhc------------CCEEEEeccCCCeeEEEEEEECCCCCEEEECCee-eeecccCCeeE
Confidence 99 9999999999999876553 6799999999339999999998888887665432 22 3333334
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcC
Q 009316 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 308 ~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G 387 (537)
....|++ ++++..+++.+.+.++++++||.|++++||+++++|++||+|+|||++++...+...+|+|+++++++.++|
T Consensus 209 ~~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~~g~~~viEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g 287 (380)
T 3ax6_A 209 TVIAPAR-IEEKYSKIAREIATSVVEALEGVGIFGIEMFLTKQGEILVNEIAPRPHNSGHYTIEACVTSQFEQHIRAIMN 287 (380)
T ss_dssp EEEESCS-SCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTSCEEEEEEESSCCGGGTHHHHHBSSCHHHHHHHHHTT
T ss_pred EEECCCC-CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEEEecCCCCCCceeehhhccccHHHHHHHHHhC
Confidence 4567887 899999999999999999999999999999999889999999999999887778889999999999999999
Q ss_pred CCCCCCccccccceeEEEEEEeeCCCCCCCCC-CCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHH
Q 009316 388 GKLRYKQEDIVLQGHSIECRINAEDPFKNFRP-GPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (537)
Q Consensus 388 ~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p-~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ 466 (537)
.+++... ..+.++.+++++++......+ .+| +..+ ..|++++. ++ |..+.. ..+.+|+|+++|+|.+
T Consensus 288 ~~l~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~---~~p~~~~~--~~-g~~~~~-~~~~lg~v~~~g~~~~ 355 (380)
T 3ax6_A 288 LPLGSTE----LLIPAVMVNLLGEEGYYGKPALIGL-EEAL---AIEGLSLH--FY-GKKETR-PYRKMGHFTVVDRDVE 355 (380)
T ss_dssp CCCCCCC----BCSCEEEEEEEBCTTCCBSEEEESH-HHHH---TSTTEEEE--EC-CCSCBC-BTCEEEEEEEECSSHH
T ss_pred CCCCCcc----ccCceEEEEEecccccccccccchh-HHHh---cCCCCEEE--ec-CCCCCC-CCCeeEEEEEEeCCHH
Confidence 9886432 123377888888654201111 122 2212 33566442 22 333322 2456999999999999
Q ss_pred HHHHHHHHhhhcceEeee
Q 009316 467 KAIERMKRALNDTIITGV 484 (537)
Q Consensus 467 ea~~~~~~al~~~~i~g~ 484 (537)
+|.++++++++.++++-.
T Consensus 356 ~a~~~~~~~~~~i~~~~~ 373 (380)
T 3ax6_A 356 RALEKALRAKKILKVVSE 373 (380)
T ss_dssp HHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHhhhhhhcC
Confidence 999999999999999753
No 24
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.1e-45 Score=393.40 Aligned_cols=376 Identities=16% Similarity=0.176 Sum_probs=312.3
Q ss_pred CcEEEEecCCCCCC--chhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCCccccc--HHHHHHHHHCCCc
Q 009316 95 IPCVAVYSTIDKDA--LHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYGFLAEN--AVFVEMCREHGIN 170 (537)
Q Consensus 95 i~~v~v~~~~d~~~--~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~g~lsE~--~~~a~~~e~~Gl~ 170 (537)
+.+|+++++.|... ++...||+.+++++.+..+++.+++.|++++++.++|+|||+ +|+ ..+++.++++|++
T Consensus 52 ~~~Vav~~~~D~~~~~p~~~~Ad~~~~~~~~~~~~~~~~i~~I~~~a~~~~id~Vip~----sE~~l~~~a~~~e~~Gi~ 127 (474)
T 3vmm_A 52 KYSVAVIKDKDYFKSLADFEHPDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTN----NELFIAPMAKACERLGLR 127 (474)
T ss_dssp HHEEEEEECGGGCSSGGGGCCCSCCSSCCSCCCCCHHHHHHHHHHHHHHTTCSEEEES----CGGGHHHHHHHHHHTTCC
T ss_pred ceEEEEEeCCCcccCCcchhhcCeEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEC----CcccHHHHHHHHHHcCCC
Confidence 45788888877654 458999999998776666667889999999999999999993 477 7899999999998
Q ss_pred eeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHH
Q 009316 171 FIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLL 250 (537)
Q Consensus 171 ~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~ 250 (537)
||+++++..++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||..|+||+|++++++.+|+.+++
T Consensus 128 --g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~--~~v~s~ee~~~~~~~lg~PvVVKP~~g~gg~Gv~iv~~~eel~~a~ 203 (474)
T 3vmm_A 128 --GAGVQAAENARDKNKMRDAFNKAGVKSIKN--KRVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDEF 203 (474)
T ss_dssp --CSCHHHHHHTTCHHHHHHHHHHTTSCCCCE--EEECSHHHHHHHHHHSCSSEEEEESSCCTTTTCEEECCTTSHHHHH
T ss_pred --CCCHHHHHHhhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEECCCCcCceEEEECCHHHHHHHH
Confidence 999999999999999999999999999999 7889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-------hcCCCcEEEEecccCCcE-----------EEEEE-EEeCCCCEEEEeeeeeeeccccceeEEEc
Q 009316 251 QQAKSEAAA-------AFGNDGVYLEKYVQNPRH-----------IEFQV-LADKYGNVVHFGERDCSIQRRNQKLLEEA 311 (537)
Q Consensus 251 ~~~~~~~~~-------~~g~~~vlvEe~I~g~~e-----------i~v~v-~~d~~G~vv~~~~r~~s~~~~~~k~~e~~ 311 (537)
+.+..+... .+ +..+++|+||+|.+| +++.+ +.|+++.++.+.+++|+.+ +++..+.+
T Consensus 204 ~~~~~~~~~~~~~~a~~~-~~~vlVEe~I~G~e~~~~q~~~~~~e~sv~~v~~dg~~~~v~i~~~~~~~~--~~~~~~~~ 280 (474)
T 3vmm_A 204 NRVNDYLKSINVPKAVTF-EAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQIG--FTETSHIT 280 (474)
T ss_dssp HHHHHHHTTSCCCTTCCC-SCSEEEEECCCBCHHHHCSSSSSCSEEEEEEEEETTEEEEEEEEEECCCBT--TBCCEEEE
T ss_pred HHHHHHHhhccccccccC-CCeEEEEeCCCCceeeeeecccccceeEEEEEEECCeEEEEEEEeeccCCC--ccceEEEE
Confidence 988776543 23 378999999999653 88874 4566666677788888766 77888999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCccee-EEEEEEeCCCCeEEEEEeccCCC--cccchhhhcCCCHHHHHHHHHc-C
Q 009316 312 PSPALTPELRKAMGDAAVAAAASIGYIGVG-TVEFLLDERGSFYFMEMNTRIQV--EHPVTEMISSVDLIEEQIHVAM-G 387 (537)
Q Consensus 312 P~~~l~~~~~~~l~~~a~~~~~alg~~G~~-~vEf~~~~~g~~~~lEiN~R~~g--~~~~~e~~tGidl~~~~i~~a~-G 387 (537)
|++ ++++.+++|.+.+.++++++|+.|.+ |+||+++++|++||||||||++| .++++++++|+|++++++++++ |
T Consensus 281 Pa~-l~~~~~~~l~~~a~~~~~alG~~g~~~~vef~~~~dg~~~~iEvNpR~~G~~~~~~~~~~tG~dl~~~~i~~a~~G 359 (474)
T 3vmm_A 281 PSI-LDEEAKKKIVEAAKKANEGLGLQNCATHTEIKLMKNREPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVLCFG 359 (474)
T ss_dssp SCC-CCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEEGGGEEEEEEEESSCCSTTHHHHHHHHHCCCHHHHHHHHHHHG
T ss_pred CCC-CCHHHHHHHHHHHHHHHHHcCCCCccEEEEEEEcCCCCEEEEEEeCCCCCCchHHHHHHHHCcCHHHHHHHHHcCC
Confidence 996 99999999999999999999999887 69999998889999999999995 4899999999999999999999 9
Q ss_pred CCCCCCccccc-cceeEEEEEEeeCCCCC--CCCCCCc--eEEEEecCC----CCeEEEee-----eccCCCccCCCCCC
Q 009316 388 GKLRYKQEDIV-LQGHSIECRINAEDPFK--NFRPGPG--IITAYLPAG----GPFVRMDS-----HVYPDYVVPPSYDS 453 (537)
Q Consensus 388 ~~l~~~~~~~~-~~g~ai~~ri~ae~p~~--~f~p~~G--~i~~~~~~~----~~~vr~d~-----~~~~G~~v~~~~ds 453 (537)
+++++.+..++ ..+++..|+++++.+.. .+.|..+ .|..+..|. +..+.++. +.+-.+.+-..|||
T Consensus 360 ~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (474)
T 3vmm_A 360 KDADLPDGLLDQEPYYVADCHLYPQHFKQNGQIPETAEDLVIEAIDIPDGLLKGDTEIVSFSAAAPGTSVDLTLFEAFNS 439 (474)
T ss_dssp GGSCCCSSCCCCCSSEEEEEEECHHHHHHTTSSCTTCEEEEEEEEECCTTCCCTTCEEEEEEECCTTEEECTTSCGGGCC
T ss_pred CCCCCCcccccCCCceeEEEEEeccccccccccCCcccceeecceecccceecccceEeeccCCCCCceEEEEeehhccC
Confidence 99998877765 35788899999876532 1233332 344555552 33344432 22334556668999
Q ss_pred ccEEEEEEcCCHHHHHHHHHHhhhcceEee
Q 009316 454 LLGKLIVWAPTREKAIERMKRALNDTIITG 483 (537)
Q Consensus 454 ~ig~vi~~g~~~~ea~~~~~~al~~~~i~g 483 (537)
.++-++ +|.++++..+.+++.++...++.
T Consensus 440 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 468 (474)
T 3vmm_A 440 IAAFEL-KGSNSQDVAESIRQIQQHAKLTA 468 (474)
T ss_dssp CEEEEE-EESCHHHHHHHHHHHHHHCEEEE
T ss_pred ceeEEe-ccccHHHHHHHHHHHHHhhhhhh
Confidence 776555 99999999999999999888764
No 25
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=100.00 E-value=6.2e-44 Score=374.99 Aligned_cols=363 Identities=18% Similarity=0.221 Sum_probs=295.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+.|+|+|+|+|.++.+++++|+++|+++++++. +.+++...++|+.+.. +|.|.+.+.+++++ +|+|.+
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~--~~~~~~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvI~~ 81 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDP--TKNSPCAQVADIEIVA-------SYDDLKAIQHLAEI--SDVVTY 81 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEES--STTCTTTTTCSEEEEC-------CTTCHHHHHHHHHT--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeC--CCCCchHHhCCceEec-------CcCCHHHHHHHHHh--CCEeee
Confidence 357999999999999999999999999999954 4556678899998864 58999999999975 888875
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeec
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~ 229 (537)
++ ......+++.+++.|+ +||++++++.+.||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||.
T Consensus 82 ~~--e~~~~~~~~~l~~~g~--~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 155 (389)
T 3q2o_A 82 EF--ENIDYRCLQWLEKHAY--LPQGSQLLSKTQNRFTEKNAIEKAGLPVATY--RLVQNQEQLTEAIAELSYPSVLKTT 155 (389)
T ss_dssp SC--CCCCHHHHHHHHHHSC--CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSEEEEES
T ss_pred cc--ccccHHHHHHHHhhCc--cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHhcCCCEEEEeC
Confidence 44 3455678888888886 6899999999999999999999999999999 7789999999999999999999999
Q ss_pred CCCC-CcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeE
Q 009316 230 AGGG-GRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 230 ~g~g-g~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~ 308 (537)
.|++ |+|++++++.+|+.++++.+. +..+++|+||+|.+|++|.++.|.+|+++.+...+. .++......
T Consensus 156 ~~~~~g~Gv~~v~~~~el~~~~~~~~--------~~~~lvEe~i~g~~E~~v~~~~~~~G~~~~~~~~e~-~~~~g~~~~ 226 (389)
T 3q2o_A 156 TGGYDGKGQVVLRSEADVDEARKLAN--------AAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAEN-IHVNNILHE 226 (389)
T ss_dssp SCCSSSCCEEEESSGGGHHHHHHHHH--------HSCEEEEECCCCSEEEEEEEEECTTCCEEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHhcC--------CCCEEEEecccCceEEEEEEEEcCCCCEEEecCeee-EEcCCceEE
Confidence 9975 899999999999999987653 378999999998899999999998899887765543 233333344
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCC
Q 009316 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~ 388 (537)
...|+. ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||||++++.+++..++|+|++++++++++|.
T Consensus 227 ~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~dg~~~viEiNpR~~~s~~~~~~~~g~~~~~~~~r~~lg~ 305 (389)
T 3q2o_A 227 SIVPAR-ITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICNL 305 (389)
T ss_dssp EEESCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTC
T ss_pred EECCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCCEEEEEeeCCCCCchhHHHHHcCCCHHHHHHHHHcCC
Confidence 456775 9999999999999999999999999999999998889999999999999988889999999999999999999
Q ss_pred CCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHH
Q 009316 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
+++.. .....+++..+...... +... .....|++.+ ++|......+ ...+|+|++.|+|.++|
T Consensus 306 ~l~~~----~~~~~~~~~~~~g~~~~-------~~~~--~~~~~p~~~~--~lygk~~~~~--~r~~G~v~~~~~~~~~a 368 (389)
T 3q2o_A 306 PLGET----NLLKPVVMVNILGEHIE-------GVLR--QVNRLTGCYL--HLYGKEEAKA--QRKMGHVNILNDNIEVA 368 (389)
T ss_dssp CCCCC----CBCSCEEEEEEEHHHHH-------HHHH--TGGGCTTEEE--EECCCSSCCT--TSEEEEEEEECSSHHHH
T ss_pred CCCCc----cccCcEEEEEEecCchh-------hHHH--HHHhCCCCEE--EECCCCCCCC--CCeeEEEEEEcCCHHHH
Confidence 98542 22334666666643100 0000 0112345543 4443323333 23489999999999999
Q ss_pred HHHHHHhh
Q 009316 469 IERMKRAL 476 (537)
Q Consensus 469 ~~~~~~al 476 (537)
+++++.+.
T Consensus 369 ~~~a~~~~ 376 (389)
T 3q2o_A 369 LEKAKSLH 376 (389)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 99987664
No 26
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=100.00 E-value=1.4e-44 Score=383.86 Aligned_cols=378 Identities=18% Similarity=0.232 Sum_probs=288.4
Q ss_pred CEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa-~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
+||||+|.|.....+++++ +++|++++++++. + .....+++ .+.+ ++.|.+++++++++.++|+|+|+
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~--~~~~~~~~-~~~~-------~~~d~~~l~~~~~~~~~d~v~~~ 69 (424)
T 2yw2_A 1 MKVLVVGNGGREHAIAWKVAQSPLVKELYVAKG-N--AGIWEIAK-RVDI-------SPTDVEKLAEFAKNEGVDFTIVG 69 (424)
T ss_dssp CEEEEEESSHHHHHHHHHHTTCTTCSEEEEEEC-C--TTGGGTSE-EECS-------CTTCHHHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhhCCCCCEEEEECC-C--cchhhhcc-cccC-------CcCCHHHHHHHHHHcCCCEEEEC
Confidence 4799999996555555443 5789998888642 2 22344454 3322 57899999999999999999986
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 009316 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 151 ~g~lsE~~---~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvK 227 (537)
. |+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 70 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~PvvvK 143 (424)
T 2yw2_A 70 P----EAPLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARY--EVFTDFEKAKEYVEKVGAPIVVK 143 (424)
T ss_dssp S----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHHHCSSEEEE
T ss_pred C----chHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHHcCCcEEEE
Confidence 4 654 46788899999999999999999999999999999999999998 67899999999999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccc
Q 009316 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQ 305 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g--~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~ 305 (537)
|..|+||+||+++++.+|+.++++.+... ..|+ +..+++|+||+| +|++|.++.|++ .+..+.. +++++
T Consensus 144 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~g-~E~sv~~~~~G~-~~~~~~~-----~~~~~ 214 (424)
T 2yw2_A 144 ADGLAAGKGAVVCETVEKAIETLDRFLNK--KIFGKSSERVVIEEFLEG-EEASYIVMINGD-RYVPLPT-----SQDHK 214 (424)
T ss_dssp ESSCCTTCSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEETT-EEEECCC-----BEECC
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCCC-cEEEEEEEEcCC-EEEeecc-----eeecc
Confidence 99999999999999999999999877541 2243 368999999998 899999998643 3333221 22232
Q ss_pred ee------------EEEcCCCCCCHHHHHHHH-HHHHHHHHHc-----CCcceeEEEEEEeCCCCeEEEEEeccCCCc-c
Q 009316 306 KL------------LEEAPSPALTPELRKAMG-DAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVE-H 366 (537)
Q Consensus 306 k~------------~e~~P~~~l~~~~~~~l~-~~a~~~~~al-----g~~G~~~vEf~~~~~g~~~~lEiN~R~~g~-~ 366 (537)
+. ...+|++.+++++.+++. +.+.++++++ +|.|++++||+++++| +||+|||||+++. +
T Consensus 215 ~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~ 293 (424)
T 2yw2_A 215 RLLDEDKGPNTGGMGAYSPTPVINEEVEKRIREEIVERVIKGLKEEGIYYRGFLYAGLMITKEG-PKVLEFNVRLGDPEA 293 (424)
T ss_dssp EEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTTH
T ss_pred ccccCCCCCCCCCCeeECCCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEecCCCCcHH
Confidence 22 245788768999998884 6777777765 7789999999999989 9999999999765 3
Q ss_pred cchhhhcCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCce-EEEEecC-CCCeEEEeeeccCC
Q 009316 367 PVTEMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGI-ITAYLPA-GGPFVRMDSHVYPD 444 (537)
Q Consensus 367 ~~~e~~tGidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~-i~~~~~~-~~~~vr~d~~~~~G 444 (537)
...+..+|+|+++.+++++.|. ++. . ....++++.++++++++.. .|..|. |..+..+ ..|++++. +.|
T Consensus 294 ~~i~~~~g~d~~~~~~~~~~g~-l~~--~-~~~~~~a~~~~~~~~g~~~--~~~~g~~i~~~~~~~~~~~~~~~---~~g 364 (424)
T 2yw2_A 294 QPILMRVKNDFLETLLNFYEGK-DVH--I-KEDERYALDVVLASRGYPE--KPETGKIIHGLDYLKSMEDVVVF---HAG 364 (424)
T ss_dssp HHHHHTBCSCHHHHHHHHHTTC-CCC--C-CBCSSEEEEEEEECTTTTS--SCCCCCBCBCHHHHHTSTTEEEE---ESS
T ss_pred HHHHHHhCCCHHHHHHHHHcCC-CCc--c-cccCCcEEEEEEecCCCCC--CCCCCCcCcCcccccCCCCeEEE---Ecc
Confidence 3455679999999999999997 431 1 1223688999998875422 344554 4433211 13566541 235
Q ss_pred CccC----CCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeeec
Q 009316 445 YVVP----PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVP 485 (537)
Q Consensus 445 ~~v~----~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~ 485 (537)
..+. .....++|+|+++|+|+++|+++++++++.+.++|..
T Consensus 365 ~~~~~~~~~~~~~r~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~ 409 (424)
T 2yw2_A 365 TKKEGNFTVTSGGRVLNVCAYGKTLKEAKERAYEAIRYVCFEGMH 409 (424)
T ss_dssp EEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTCB
T ss_pred eEeeCCEEEecCCcEEEEEEEeCCHHHHHHHHHHHHhcceeCCcE
Confidence 4432 1123468999999999999999999999999999863
No 27
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=100.00 E-value=2.9e-44 Score=371.66 Aligned_cols=337 Identities=16% Similarity=0.188 Sum_probs=275.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
||||+|+|+|+.+++++.+|+++|+++ ++.+.+ ++. +.+ . .++|+|+|.
T Consensus 1 Mk~igilGgGqlg~m~~~aa~~lG~~v--~~~~~~--a~~-------~~~----------~----------l~~d~it~e 49 (355)
T 3eth_A 1 MKQVCVLGNGQLGRMLRQAGEPLGIAV--WPVGLD--AEP-------AAV----------P----------FQQSVITAE 49 (355)
T ss_dssp CCEEEEESCSHHHHHHHHHHGGGTCEE--EEECTT--CCG-------GGC----------C----------CTTSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEE--ECCCCC--CCc-------eEE----------c----------ccCCEEEEC
Confidence 578999999999999999999999999 333333 222 111 1 179999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecC
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~ 230 (537)
+++.+.. +++.+++.| +++|++++++.+.||..+|++++++|||+|++ ..+.+.+++.++++++|||+||||..
T Consensus 50 ~e~v~~~--~l~~l~~~~--~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~--~~v~~~~e~~~~~~~~G~P~VvKp~~ 123 (355)
T 3eth_A 50 IERWPET--ALTRQLARH--PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPW--QLLAERSEWPAVFDRLGELAIVKRRT 123 (355)
T ss_dssp CSCCCCC--HHHHHHHTC--TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCE--EEECCGGGHHHHHHHHCSEEEEEESS
T ss_pred cCCcCHH--HHHHHHhcC--CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCE--EEECCHHHHHHHHHHcCCCEEEEecC
Confidence 9887654 667788887 56899999999999999999999999999999 77899999999999999999999998
Q ss_pred C-CCCcceEEeCC--HHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeecccccee
Q 009316 231 G-GGGRGMRLAKE--PDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (537)
Q Consensus 231 g-~gg~Gv~~v~~--~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~ 307 (537)
+ ++|+|++++++ .+|+.+++ ++ .+++|+||++.+|++|.++.+.+|++..+...+ ..++.+...
T Consensus 124 ~G~~GkGv~~v~~~~~~el~~a~----------~~--~vivEe~I~~~~Eisv~v~~~~~G~~~~~p~~e-~~~~~g~~~ 190 (355)
T 3eth_A 124 GGYDGRGQWRLRANETEQLPAEC----------YG--ECIVEQGINFSGEVSLVGARGFDGSTVFYPLTH-NLHQDGILR 190 (355)
T ss_dssp SCCTTTTEEEEETTCGGGSCGGG----------TT--TEEEEECCCCSEEEEEEEEECTTSCEEECCCEE-EEEETTEEE
T ss_pred CCCCCCeEEEEcCCCHHHHHHHh----------hC--CEEEEEccCCCcEEEEEEEEcCCCCEEEECCEE-EEeeCCeEE
Confidence 5 78999999999 99988743 23 699999999769999999999899987765433 244444433
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcC
Q 009316 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 308 ~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G 387 (537)
....|+ .++++..+++.+.+.+++++|||.|++++||+++++ ++||+|||||+++++++++.++++|++++++++++|
T Consensus 191 ~~~~pa-~l~~~~~~~~~~~a~~i~~aLg~~G~~~vEf~~~~~-~~~v~EinpR~~~sg~~t~~~~~~s~fe~~~ra~~G 268 (355)
T 3eth_A 191 TSVAFP-QANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQ-GLLINELAPRVHNSGHWTQNGASISQFELHLRAITD 268 (355)
T ss_dssp EEEECS-SCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETT-EEEEEEEESSCCGGGTTHHHHSSSCHHHHHHHHHTT
T ss_pred EEECCC-CCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEECC-cEEEEEeeCCCCCCccEEeeeecCCHHHHHHHHHcC
Confidence 344555 499999999999999999999999999999999975 599999999999999999999999999999999999
Q ss_pred CCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHH
Q 009316 388 GKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREK 467 (537)
Q Consensus 388 ~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~e 467 (537)
.+++.. .....+++++|..++. ...+ ...|++. .++|.. .+.+ .+.+|+|.+.|+|.++
T Consensus 269 ~pl~~~----~~~~~~~m~nilg~~~----------~~~~--~~~p~~~--~~~ygk-~~r~--~rkmGhv~~~~~~~~~ 327 (355)
T 3eth_A 269 LPLPQP----VVNNPSVMINLIGSDV----------NYDW--LKLPLVH--LHWYDK-EVRP--GRKVGHLNLTDSDTSR 327 (355)
T ss_dssp CCCCCC----CCCSCEEEEEEESCCC----------CGGG--GGSTTCE--EEECCC-CCCT--TCEEEEEEEECSCHHH
T ss_pred CCCCCc----cccCceEEEEEecchH----------HHHH--HhCCCCE--EEEcCC-CCCC--CCeeEEEEEEcCCHHH
Confidence 998532 3455688999998641 1111 1234554 455644 5555 5679999999999999
Q ss_pred HHHHHHHhhhcce
Q 009316 468 AIERMKRALNDTI 480 (537)
Q Consensus 468 a~~~~~~al~~~~ 480 (537)
+.++++++.+.+.
T Consensus 328 ~~~~~~~~~~~~~ 340 (355)
T 3eth_A 328 LTATLEALIPLLP 340 (355)
T ss_dssp HHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988763
No 28
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=100.00 E-value=9.4e-45 Score=377.75 Aligned_cols=362 Identities=15% Similarity=0.186 Sum_probs=244.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
||||||+|+|.++.+++++++++|++++++++ +...+...++|+.+..+ ++.+++ .++|+|+++
T Consensus 1 M~~Ililg~g~~~~~~~~a~~~~G~~v~~~~~--~~~~~~~~~~~~~~~~~------------~l~~~~--~~~d~v~~~ 64 (365)
T 2z04_A 1 MLTVGILGGGQLGWMTILEGRKLGFKFHVLED--KENAPACRVADRCFRTG------------QISEFV--DSCDIITYE 64 (365)
T ss_dssp -CEEEEECCSHHHHHHHHHHGGGTCEEEEECS--SSSCHHHHHSSEEECGG------------GHHHHH--HHCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC--CCCCchhhhccceeeHH------------HHHHHh--hcCCEEEEC
Confidence 48999999999999999999999999999954 44456678888877421 677777 569999998
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecC
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~ 230 (537)
++... ..+++.++. ++||++++++.+.||..++++|+++|||+|++ ..+. .+++.++++++|||+||||..
T Consensus 65 ~e~~~--~~~~~~l~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~-~~~~~~~~~~~~~P~vvKp~~ 135 (365)
T 2z04_A 65 FEHIK--DEVLEKCES----KLIPNPQALYVKKSRIREKLFLKKHGFPVPEF--LVIK-RDEIIDALKSFKLPVVIKAEK 135 (365)
T ss_dssp SSCCC--HHHHHHHTT----TBSSCTHHHHHHTCHHHHHHHHHTTTCCCCCE--EEC---------------CEEEECC-
T ss_pred CCCCc--HHHHHHHhh----hcCCCHHHHHHhhCHHHHHHHHHHcCCCCCCE--EEEc-HHHHHHHHHhcCCCEEEEEcC
Confidence 74321 235555543 67999999999999999999999999999998 5666 788888888999999999999
Q ss_pred CC-CCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeEE
Q 009316 231 GG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (537)
Q Consensus 231 g~-gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~e 309 (537)
|+ ||+|++++++.+|+.++++.+. ++..+++|+||++++|+++.++.|++|+++.+...++. ++.......
T Consensus 136 ~~~~g~Gv~~v~~~~el~~~~~~~~-------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~~~~-~~~~~~~~~ 207 (365)
T 2z04_A 136 LGYDGKGQYRIKKLEDANQVVKNHD-------KEESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFNK-HEEGILIYN 207 (365)
T ss_dssp ------------------------------------CEEEECCCCSEEEEEEEEECTTCCEEECCEEEEE-EETTEEEEE
T ss_pred CCcCCCCeEEECCHHHHHHHHHHhc-------cCCCEEEEccCCCCEEEEEEEEECCCCCEEEECCEEEE-EeCCEeEEE
Confidence 99 9999999999999999887653 24789999999933999999999988898887665542 333334445
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCC
Q 009316 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 310 ~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~ 389 (537)
..|++ + .+++.+.+.++++++||.|++++||+++++|++||+|||||+++....+...+|+|+++.+++.++|.+
T Consensus 208 ~~p~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~~~g~~~~iEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 282 (365)
T 2z04_A 208 YVPYA-K----LKEAEEITKRLMELLDIVGVFTVEFFLLKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEMP 282 (365)
T ss_dssp EEEEE-C----CHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTCC
T ss_pred ECCHh-H----HHHHHHHHHHHHHHcCCEEEEEEEEEEeCCCcEEEEEeccCcCCCceEEeeccccCHHHHHHHHHhCCC
Confidence 66765 3 567889999999999999999999999988899999999999875334778899999999999999999
Q ss_pred CCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHHH
Q 009316 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAI 469 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~ 469 (537)
++..+. ...+++++++++++. | +.+..+ ...|++++ +++ |..+. .++++|+|+++|+|+++|+
T Consensus 283 l~~~~~----~~~~~~~~~~~~~~~----~--~~~~~~--~~~~~~~~--~~~-g~~~~--~~~~lg~v~~~g~~~~~a~ 345 (365)
T 2z04_A 283 LGSTEL----KLPSGMVNILGKSYE----E--IPLKEI--LSVEGAKL--YWY-GKEKK--PRRKVGHVNVVGRSKEEVV 345 (365)
T ss_dssp CCCCCB----SSCEEEEEEESCCGG----G--SCHHHH--TTSTTEEE--EEC-CCCCC--TTCEEEEEEEECSSHHHHH
T ss_pred CCCccc----cCCEEEEEEECCccc----c--chHHHH--hcCCCCEE--Eec-CCCCC--CCCeEEEEEEecCCHHHHH
Confidence 865431 234778999987531 2 223322 23356654 344 55333 3678999999999999999
Q ss_pred HHHHHhhhcceEeeeccC
Q 009316 470 ERMKRALNDTIITGVPTT 487 (537)
Q Consensus 470 ~~~~~al~~~~i~g~~tn 487 (537)
++++++++.+.++|++-+
T Consensus 346 ~~~~~~~~~i~~~~~~~~ 363 (365)
T 2z04_A 346 EKVERVFTLLKGSREKLP 363 (365)
T ss_dssp HHHHHHHHC---------
T ss_pred HHHHHHHHHhhhccCCCC
Confidence 999999999999998654
No 29
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=100.00 E-value=8.7e-45 Score=388.83 Aligned_cols=392 Identities=17% Similarity=0.186 Sum_probs=287.2
Q ss_pred CCCCCCCEEEEEcCcHHHHHHHHH-HHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 66 KVTCRQEKILVANRGEIAVRVIRT-AHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 66 ~~~~~~~~iLI~~~g~ia~~ii~a-a~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
-+.+|.+||||+|+|.....+++. ++++|++++++.... .... ..++ ...+. -+|.|.+++++++++.++
T Consensus 19 ~~~~m~~~IlIlG~g~r~~al~~~~a~~~g~~~v~~~~~~--~~~~-~~~~-~~~~~-----~~~~d~~~l~~~~~~~~~ 89 (452)
T 2qk4_A 19 YFQSMAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGN--AGTA-CSEK-ISNTA-----ISISDHTALAQFCKEKKI 89 (452)
T ss_dssp ---CCSEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECC--GGGS-BSSS-EEECC-----CCSSCHHHHHHHHHHHTC
T ss_pred cccccCcEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCC--hhhh-hhcc-ccccc-----cCCCCHHHHHHHHHHcCC
Confidence 344567899999999766666655 467899988775432 2222 3344 22221 258899999999999999
Q ss_pred CEEEeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcC
Q 009316 145 TMLHPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELG 221 (537)
Q Consensus 145 d~V~pg~g~lsE~~---~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig 221 (537)
|+|+|+. |+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++ ..+.+.+++.++++++|
T Consensus 90 d~V~~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g 163 (452)
T 2qk4_A 90 EFVVVGP----EAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQW--KAFTKPEEACSFILSAD 163 (452)
T ss_dssp CEEEECS----SHHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCE--EEESSHHHHHHHHHHCS
T ss_pred CEEEECC----cHHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHhCC
Confidence 9999864 554 56788899999999999999999999999999999999999998 67889999999999999
Q ss_pred Cc-EEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeee-
Q 009316 222 FP-VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERD- 297 (537)
Q Consensus 222 ~P-vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g--~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~- 297 (537)
|| +||||..|+||+||+++++.+|+.++++.+... ..|+ +..+++|+||+| +|++|.++.|++ .++.+....
T Consensus 164 ~P~vvvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~G-~E~sv~~~~dG~-~~~~~~~~~~ 239 (452)
T 2qk4_A 164 FPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQE--KAFGAAGETIVIEELLDG-EEVSCLCFTDGK-TVAPMPPAQD 239 (452)
T ss_dssp SCEEEEEESBC---CCEEECSSHHHHHHHHHHHTTC---------CCEEEEECCCS-EEEEEEEEECSS-CEEECCCBEE
T ss_pred CCeEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCCC-CeEEEEEEECCC-EEEEcceeee
Confidence 99 999999999999999999999999999876431 1243 368999999998 999999998543 355554321
Q ss_pred e-eeccc-----cceeEEEcCCCCCCHHHHHHHH-HHHHHHHHHc-----CCcceeEEEEEEeCCCCeEEEEEeccCCCc
Q 009316 298 C-SIQRR-----NQKLLEEAPSPALTPELRKAMG-DAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVE 365 (537)
Q Consensus 298 ~-s~~~~-----~~k~~e~~P~~~l~~~~~~~l~-~~a~~~~~al-----g~~G~~~vEf~~~~~g~~~~lEiN~R~~g~ 365 (537)
. ..... .......+|++.+++++.+++. +.+.++++++ +|.|++++||+++++| +||+|||||+++.
T Consensus 240 ~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~~~~ 318 (452)
T 2qk4_A 240 HKRLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNG-PKVLEFNCRFGDP 318 (452)
T ss_dssp EEEEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEEETTE-EEEEEEESSCCTT
T ss_pred cccccCCCCCCCCCCceeeccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEeccCCCc
Confidence 0 11000 1122345788778999888886 5777777664 6789999999999989 9999999999875
Q ss_pred cc-chhhhcCCCHHHHHHHHHcCCCCCCCcccccc-cee-EEEEEEeeCCCCCCCCCCCc-eEEEEecCCCCeEEEeeec
Q 009316 366 HP-VTEMISSVDLIEEQIHVAMGGKLRYKQEDIVL-QGH-SIECRINAEDPFKNFRPGPG-IITAYLPAGGPFVRMDSHV 441 (537)
Q Consensus 366 ~~-~~e~~tGidl~~~~i~~a~G~~l~~~~~~~~~-~g~-ai~~ri~ae~p~~~f~p~~G-~i~~~~~~~~~~vr~d~~~ 441 (537)
.. .....+|+|+++.+++++.|. ++ +.++.+ .++ ++.++++++++.. .|.+| .|..+..+..|++++.
T Consensus 319 ~~~~i~~~~g~d~~~~~~~~~~g~-l~--~~~~~~~~~~~a~~~~l~~~g~~~--~~~~g~~i~~l~~~~~~~v~~~--- 390 (452)
T 2qk4_A 319 ECQVILPLLKSDLYEVIQSTLDGL-LC--TSLPVWLENHTALTVVMASKGYPG--DYTKGVEITGFPEAQALGLEVF--- 390 (452)
T ss_dssp THHHHGGGBCSCHHHHHHHHHTTC-GG--GGCCCBCTTCEEEEEEEECTTTTS--SCCCSCBCBCHHHHHHTTCEEE---
T ss_pred HHHHHHHHhCCCHHHHHHHHHcCC-CC--cccceecCCCcEEEEEEECCCCCC--CCCCCCcccCccccCCCCcEEE---
Confidence 33 355668999999999999986 32 222232 355 8889998875432 35556 4544422123456542
Q ss_pred cCCCccC----CCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeeec
Q 009316 442 YPDYVVP----PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVP 485 (537)
Q Consensus 442 ~~G~~v~----~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~ 485 (537)
..|..++ .....++|+|+++|+|+++|+++++++++.+.++|..
T Consensus 391 ~~G~~~~~~~~~~~~~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~ 438 (452)
T 2qk4_A 391 HAGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGAI 438 (452)
T ss_dssp ESSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTCB
T ss_pred ECcEEeeCCeEEecCCeEEEEEEecCCHHHHHHHHHHHHhhcccCCcE
Confidence 2455432 0113357999999999999999999999999998853
No 30
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-43 Score=373.89 Aligned_cols=372 Identities=18% Similarity=0.226 Sum_probs=286.4
Q ss_pred CEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa-~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
+||||+|.|.....+++++ +++|++++++.+. +. .....++ . + + ++.|.+++++++++.++|+|+|+
T Consensus 1 mkililG~g~r~~a~a~~l~~~~g~~~v~~~~~-~~--~~~~~~~-~--~---~---~~~d~~~l~~~~~~~~~d~v~~~ 68 (417)
T 2ip4_A 1 MKVLVVGSGGREHALLWKAAQSPRVKRLYAAPG-NA--GMEALAE-L--V---P---WNGDVEALADWALAEGIDLTLVG 68 (417)
T ss_dssp CEEEEEESSHHHHHHHHHHHTCSSCCEEEEEEC-CT--TGGGTSE-E--C---C---CCSCHHHHHHHHHHHTCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEECC-Cc--chhhhcc-c--C---C---CccCHHHHHHHHHHcCCCEEEEC
Confidence 4799999996666666666 5589998888542 21 2233333 2 2 1 58899999999999999999997
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 009316 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 151 ~g~lsE~~---~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvK 227 (537)
. |+. .+++.+++.|++++||++++++.++||..+|++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 69 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~P~vvK 142 (417)
T 2ip4_A 69 P----EAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARY--RVFREPLEALAYLEEVGVPVVVK 142 (417)
T ss_dssp S----SHHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCE--EEESSHHHHHHHHHHHCSSEEEE
T ss_pred C----chHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCe--eeeCCHHHHHHHHHHcCCCEEEE
Confidence 4 554 47788899999999999999999999999999999999999998 67899999999999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccce-
Q 009316 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQK- 306 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k- 306 (537)
|..|+||+||+++++.+|+.++++.+.. ..|+ ..+++|+||+| +|++|.++.|++ .+..+.. ++++++
T Consensus 143 p~~~~gg~Gv~~v~~~~el~~~~~~~~~---~~~~-~~~lvEe~i~g-~E~sv~~~~~G~-~~~~~~~-----~~~~~~~ 211 (417)
T 2ip4_A 143 DSGLAAGKGVTVAFDLHQAKQAVANILN---RAEG-GEVVVEEYLEG-EEATVLALTDGE-TILPLLP-----SQDHKRL 211 (417)
T ss_dssp CTTSCSSTTCEEESCHHHHHHHHHHHTT---SSSC-CCEEEEECCCS-CEEEEEEEESSS-CEEECCC-----BEECCEE
T ss_pred ECCCCCCCCEEEeCCHHHHHHHHHHHHh---hccC-CeEEEEECccC-cEEEEEEEEeCC-EEEEcch-----heechhh
Confidence 9999999999999999999999987641 1233 78999999998 899999998543 3333321 122222
Q ss_pred -----------eEEEcCCCCCCHHHHHHH-HHHHHHHHHHc-----CCcceeEEEEEEeCCCCeEEEEEeccCCCcc-cc
Q 009316 307 -----------LLEEAPSPALTPELRKAM-GDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PV 368 (537)
Q Consensus 307 -----------~~e~~P~~~l~~~~~~~l-~~~a~~~~~al-----g~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~-~~ 368 (537)
....+|++ +++++.+++ .+.+.++++++ +|.|++++||+++++| +||+|||||+++.. ..
T Consensus 212 ~~~~~~~~~g~~~~~~p~~-l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~ 289 (417)
T 2ip4_A 212 LDGDQGPMTGGMGAVAPYP-MDEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLMLTREG-PKVLEFNARFGDPEAQA 289 (417)
T ss_dssp ETTTEEEECSCSEEEESCC-CCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEECSSC-EEEEEEESSCCTTHHHH
T ss_pred ccCCCCCcCCCCeeeeCCC-CCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEEeCCC-eEEEEEecCCCCcHHHH
Confidence 23457888 999998888 55677777765 7789999999999889 99999999998663 34
Q ss_pred hhhhcCCCHHHHHHHHHcCCCCCCCcccccc-ceeEEEEEEeeCCCCCCCCCCCce-EEEEecCCCCeEEEeeeccCCCc
Q 009316 369 TEMISSVDLIEEQIHVAMGGKLRYKQEDIVL-QGHSIECRINAEDPFKNFRPGPGI-ITAYLPAGGPFVRMDSHVYPDYV 446 (537)
Q Consensus 369 ~e~~tGidl~~~~i~~a~G~~l~~~~~~~~~-~g~ai~~ri~ae~p~~~f~p~~G~-i~~~~~~~~~~vr~d~~~~~G~~ 446 (537)
....+|+|+++.+++++.|... +.++.+ .++++.+++.++++.. .|..|. |..+..+ |++++. ..|..
T Consensus 290 i~~~~g~d~~~~~~~~~~g~l~---~~~~~~~~~~~~~~~l~~~~~~~--~~~~g~~i~~~~~~--~~v~~~---~~g~~ 359 (417)
T 2ip4_A 290 LLPLLENDLVELALRVAEGRLA---GTRLSWKEGAAACVVLAAPGYPE--SPRKGIPLHVPEPP--EGVLVF---HAGTR 359 (417)
T ss_dssp HTTTBCSCHHHHHHHHHHTCGG---GCCCCBCSSEEEEEEEECTTTTT--SCCCCCBCBCCCCC--TTEEEE---ESSEE
T ss_pred HHHHhCCCHHHHHHHHHcCCCC---cCCccccCCcEEEEEEeCCCCCC--CCCCCCcccccCCC--CCeEEE---ECceE
Confidence 4557999999999999999732 222232 3678888888765422 355665 5444332 566542 24554
Q ss_pred cC-----CCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeeec
Q 009316 447 VP-----PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVP 485 (537)
Q Consensus 447 v~-----~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~ 485 (537)
+. ...+ ++|+|+++|+|+++|+++++++++.+.++|..
T Consensus 360 ~~~~~~~~~~~-rv~~v~~~g~~~~~a~~~~~~~~~~i~~~~~~ 402 (417)
T 2ip4_A 360 REGGRLVSAGG-RVLNVVGLGRDLKEALERAYAYIPQVGFPGAV 402 (417)
T ss_dssp ESSSSEEECSS-EEEEEEEEESSHHHHHHHHHHHGGGSBCTTCB
T ss_pred eeCCeEEecCC-cEEEEEEEcCCHHHHHHHHHHHHhcCccCCcE
Confidence 42 1222 48999999999999999999999999998853
No 31
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=100.00 E-value=1.7e-43 Score=370.16 Aligned_cols=361 Identities=18% Similarity=0.245 Sum_probs=289.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+.++|+|+|+|.++.+++++|+++|+++++++. +++++..+++|+.+.. +|.|.+.+.+++++ +|+|.+
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~--~~~~p~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvi~~ 79 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDP--SEDCPCRYVAHEFIQA-------KYDDEKALNQLGQK--CDVITY 79 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES--CTTCTTGGGSSEEEEC-------CTTCHHHHHHHHHH--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCChhhhhCCEEEEC-------CCCCHHHHHHHHHh--CCccee
Confidence 468999999999999999999999999999954 4456778899998864 48999999999976 899976
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeec
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~ 229 (537)
+++. -....+..+++.+ .++|++++++.+.||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||.
T Consensus 80 ~~E~--~~~~~l~~l~~~~--~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 153 (377)
T 3orq_A 80 EFEN--ISAQQLKLLCEKY--NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPF--ISVKESTDIDKAIETLGYPFIVKTR 153 (377)
T ss_dssp SSTT--SCHHHHHHHHHHS--CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCE--EEECSSTHHHHHHHHTCSSEEEEES
T ss_pred cccc--cCHHHHHHHhhhc--CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEeC
Confidence 5421 2234455555554 35799999999999999999999999999999 6788889999999999999999999
Q ss_pred CCC-CCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeeccccceeE
Q 009316 230 AGG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 230 ~g~-gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~~k~~ 308 (537)
.|+ +|+|++++++.+|+.++++.+. +..+++|+||+|.+|++|.++.+.+|++..+...+. ..+......
T Consensus 154 ~gg~~g~Gv~~v~~~~el~~a~~~~~--------~~~~ivEe~i~g~~E~sv~~~~~~~g~~~~~~~~e~-~~~~g~~~~ 224 (377)
T 3orq_A 154 FGGYDGKGQVLINNEKDLQEGFKLIE--------TSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQEN-EHRNQILFK 224 (377)
T ss_dssp SSCCTTTTEEEECSTTSHHHHHHHHT--------TSCEEEEECCCEEEEEEEEEEECGGGCEEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHhcC--------CCcEEEEccCCCCEEEEEEEEEeCCCCEEEECCEeE-EEECCEEEE
Confidence 998 8999999999999999887653 378999999999889999999887888887765543 223333344
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCC
Q 009316 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~ 388 (537)
...|+. +++ .+++.+.+.++++++||.|++++||+++++|++||+|||||++++..++...+++|+++++++.++|.
T Consensus 225 ~~~Pa~-l~~--~~~~~~~a~~i~~~lg~~G~~~ve~~~~~~g~~~v~EinpR~~~sg~~t~~~~~~s~f~~~~ra~~G~ 301 (377)
T 3orq_A 225 TIVPAR-IDK--TAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQ 301 (377)
T ss_dssp EEESCS-SCC--HHHHHHHHHHHHTTSCCCEEEEEEEEEETTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTC
T ss_pred EECCCC-CCH--HHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEEEeeCCcCCCCcEeehhcCCCHHHHHHHHHcCC
Confidence 467875 666 88999999999999999999999999998888999999999998877888889999999999999999
Q ss_pred CCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCccCCCCCCccEEEEEEcCCHHHH
Q 009316 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
+++.. +.....+++..+.+++.. +.-..+. ..|++. .++|......+ .+.+|+|.+.|+|.+++
T Consensus 302 pl~~~---~~~~~~~~m~n~lg~~~~-------~~~~~~~--~~~~~~--~~~ygk~~~~~--~rkmGhv~~~~~~~~~~ 365 (377)
T 3orq_A 302 SLPNS---IELLKPAVMMNLLGKDLD-------LLENEFN--EHPEWH--LHIYGKSERKD--SRKMGHMTVLTNDVNQT 365 (377)
T ss_dssp CCCSC---CCBSSCEEEEEEEHHHHH-------HHGGGGG--GCGGGC--EEECCCSSCCT--TSEEEEEEEECSCHHHH
T ss_pred CCCcc---ccccccEEEEEEeCccch-------hHHHHHh--hCCCCE--EEECCCCCCCC--CCeeEEEEEEcCCHHHH
Confidence 88530 233455888888875310 0000011 124443 34454434444 46799999999999999
Q ss_pred HHHHHHh
Q 009316 469 IERMKRA 475 (537)
Q Consensus 469 ~~~~~~a 475 (537)
++++..-
T Consensus 366 ~~~~~~~ 372 (377)
T 3orq_A 366 EQDMYAK 372 (377)
T ss_dssp HHHHHHH
T ss_pred HHHhHHh
Confidence 9988653
No 32
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=1.8e-43 Score=374.19 Aligned_cols=372 Identities=14% Similarity=0.118 Sum_probs=280.9
Q ss_pred CCCCEEEEEcCcHHHHHHHHH-HHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVANRGEIAVRVIRT-AHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~a-a~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
++.+||||+|.|.....++.+ ++++| +++++.. .+....+|+. + |.+++++++++.++|+|
T Consensus 13 ~~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~~-----np~~~~~d~~--i----------d~~~l~~~~~~~~~d~V 74 (412)
T 1vkz_A 13 MKAVRVHILGSGGREHAIGWAFAKQGY-EVHFYPG-----NAGTKRDGTN--H----------PYEGEKTLKAIPEEDIV 74 (412)
T ss_dssp ---CEEEEEECSHHHHHHHHHHHHTTC-EEEEEEC-----CTTGGGTSEE--C----------CCCTHHHHHTSCSSCEE
T ss_pred cccCEEEEECCCHHHHHHHHHHHhCCC-CEEEECC-----Chhhhccccc--C----------CHHHHHHHHHHcCCCEE
Confidence 345789999999666555544 58889 8887732 2445667754 2 46789999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvK 227 (537)
+|+. |++.++..++.++. ++||++++++.++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+|||
T Consensus 75 ~~~~----E~~~~a~~~~~l~~-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~e~~~~~~~~g~PvvvK 147 (412)
T 1vkz_A 75 IPGS----EEFLVEGVSNWRSN-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARF--EVAETPEELREKIKKFSPPYVIK 147 (412)
T ss_dssp CCSS----GGGTCC-----CTT-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHTTSCSSEEEE
T ss_pred EECC----cHHHHHHHHHHhhh-hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCE--EEECCHHHHHHHHHhcCCCEEEE
Confidence 9853 77666678888887 78999999999999999999999999999998 67899999999999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCC-CcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeeecccc--
Q 009316 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGN-DGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRN-- 304 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~-~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~~~~~-- 304 (537)
|..|+||+||+++++.+|+.++++.+.... ..|++ ..+++|+||+| +|++|+++.|++ .++.+. ..+..++.+
T Consensus 148 p~~~~gg~Gv~~v~~~~el~~a~~~~~~~~-~~~g~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~-~~~~~~~~~~~ 223 (412)
T 1vkz_A 148 ADGLARGKGVLILDSKEETIEKGSKLIIGE-LIKGVKGPVVIDEFLAG-NELSAMAVVNGR-NFVILP-FVRDYKRLMDG 223 (412)
T ss_dssp ESSCCSSCCEEEESSHHHHHHHHHHHHHTS-SSTTCCSCEEEEECCCS-EEEEEEEEEETT-EEEECC-CCEECCEEETT
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHhhc-cccCCCCeEEEEECCcC-cEEEEEEEECCC-EEEEee-eeEeeeeccCC
Confidence 999999999999999999999998775421 03443 48999999998 999999998754 334332 112222211
Q ss_pred ------ceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-----CCcceeEEEEEEeCCCCeEEEEEeccCCCc-ccchhhh
Q 009316 305 ------QKLLEEAPSPALTPELRKAMGDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVE-HPVTEMI 372 (537)
Q Consensus 305 ------~k~~e~~P~~~l~~~~~~~l~~~a~~~~~al-----g~~G~~~vEf~~~~~g~~~~lEiN~R~~g~-~~~~e~~ 372 (537)
.....++|++ +++++.+++.+.+.++++++ +|.|++++||+++++| +||+|||||+++. +..++..
T Consensus 224 ~~~~~~g~~~~~~P~~-l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~~~~~ 301 (412)
T 1vkz_A 224 DRGPNTGGMGSWGPVE-IPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGD-PYILEYNVRLGDPETEVIVTL 301 (412)
T ss_dssp TEEEECSCSEEEECCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHHHHHHH
T ss_pred CCCCCCCCceEEECCC-CCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEEECCC-cEEEEEecCCCCCcceeehhh
Confidence 1234678988 99999999999999999999 8889999999999889 9999999999875 5566677
Q ss_pred cCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCceEEEEecCCCCeEEEeeeccCCCc-----c
Q 009316 373 SSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDYV-----V 447 (537)
Q Consensus 373 tGidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~~-----v 447 (537)
+|+|+.+.+++++.|..... ... .+++ .++++++++. .+.|.+|.+..+.. |+ ++ +. .|.. +
T Consensus 302 ~g~d~~~~~~~~~~g~l~~~---~~~-~~~a-~~~~l~~~~~-~~~~~~g~~i~l~~---~~-~v--~~-~g~~~~~~~~ 368 (412)
T 1vkz_A 302 NPEGFVNAVLEGYRGGKMEP---VEP-RGFA-VDVVLAARGY-PDAPEKGKEITLPE---EG-LI--FF-AGVAEKDGKL 368 (412)
T ss_dssp CHHHHHHHHHHHHHTSCCCC---CCC-CSEE-EEEEEECTTT-TTSCCCCCBCBCCS---SC-CE--EE-SSEEEETTEE
T ss_pred cCCCHHHHHHHHhcCCCccc---ccc-CCeE-EEEEEecCCC-CCCCCCCCEeeeCC---CC-cE--EE-CcccccCCeE
Confidence 99999999999998863211 111 2444 5777776532 23456676432322 33 22 11 3333 2
Q ss_pred CCCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeeec
Q 009316 448 PPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVP 485 (537)
Q Consensus 448 ~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~ 485 (537)
... ++++|+|+++|+|+++|+++++++++.++++|+.
T Consensus 369 ~~~-~~~vg~v~~~g~~~~ea~~~~~~~~~~i~~~g~~ 405 (412)
T 1vkz_A 369 VTN-GGRVLHCMGTGETKEEARRKAYELAEKVHFEGKT 405 (412)
T ss_dssp EEC-SSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTCB
T ss_pred EeC-CCcEEEEEEeCCCHHHHHHHHHHHhcceeeCCCE
Confidence 223 4569999999999999999999999999999864
No 33
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=100.00 E-value=9.8e-42 Score=365.04 Aligned_cols=381 Identities=21% Similarity=0.218 Sum_probs=277.5
Q ss_pred CCCCCCCCEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009316 65 LKVTCRQEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 65 ~~~~~~~~~iLI~~~g~ia~~ii~aa-~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~ 143 (537)
.+...+.+||||+|.|.....+++++ +++|++++++.+. +. .....++ .+.+ ++.|.+++++++++.+
T Consensus 15 ~~~~~~~~~iliiG~g~r~~a~a~~~~~~~g~~~v~~~~~-~~--~~~~~~~-~~~~-------~~~d~~~l~~~~~~~~ 83 (451)
T 2yrx_A 15 NLYFQSHMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPG-NP--GIADVAE-LVHI-------DELDIEALVQFAKQQA 83 (451)
T ss_dssp CCCCCSSEEEEEEECSHHHHHHHHHHHTCTTEEEEEEEEC-CT--TGGGTSE-ECCC-------CTTCHHHHHHHHHHTT
T ss_pred ccccCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECC-Ch--hhhhhCc-eecc-------CCCCHHHHHHHHHHcC
Confidence 44444567999999996656665554 6689998877542 22 2333444 3322 4789999999999999
Q ss_pred CCEEEeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhc
Q 009316 144 CTMLHPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADEL 220 (537)
Q Consensus 144 ~d~V~pg~g~lsE~~---~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~i 220 (537)
+|+|+|+. |+. .+++.+++.|++++||++++++.+.||..+|++|+++|||+|++ ..+.+.+++.++++++
T Consensus 84 ~d~vi~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~ 157 (451)
T 2yrx_A 84 IDLTIVGP----EAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADH--AAFTSYEEAKAYIEQK 157 (451)
T ss_dssp CSEEEECS----HHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHHH
T ss_pred CCEEEECC----chHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHhc
Confidence 99999864 553 46778899999999999999999999999999999999999998 6789999999999999
Q ss_pred CCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeee
Q 009316 221 GFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC 298 (537)
Q Consensus 221 g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g--~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~ 298 (537)
+||+||||..|+||+||+++++.+|+.++++.+... ..|+ +..+++|+||+| +|++|.++.|+ +.+.....
T Consensus 158 ~~PvVvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~G-~E~sv~~~~dG--~~~~~~~~-- 230 (451)
T 2yrx_A 158 GAPIVIKADGLAAGKGVTVAQTVEEALAAAKAALVD--GQFGTAGSQVVIEEYLEG-EEFSFMAFVNG--EKVYPLAI-- 230 (451)
T ss_dssp CSSEEEEECC----CCEEEESSHHHHHHHHHHHHHH--SCCBTTBCCEEEEECCCS-EEEEEEEEEET--TEEEECCC--
T ss_pred CCcEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhc--cccCCCCCeEEEEECCcC-cEEEEEEEEcC--CEEEEeee--
Confidence 999999999999999999999999999999877642 2344 378999999998 89999999864 43333211
Q ss_pred eeccccc------------eeEEEcCCCCCCHHHHHHH-HHHHHHHHHHc-----CCcceeEEEEEEeCCCCeEEEEEec
Q 009316 299 SIQRRNQ------------KLLEEAPSPALTPELRKAM-GDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNT 360 (537)
Q Consensus 299 s~~~~~~------------k~~e~~P~~~l~~~~~~~l-~~~a~~~~~al-----g~~G~~~vEf~~~~~g~~~~lEiN~ 360 (537)
.++++ .....+|++.+++++.+++ .+.+.++++++ +|.|++++||+++++| +||+||||
T Consensus 231 --~~~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~ 307 (451)
T 2yrx_A 231 --AQDHKRAYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANG-PKVIEFNA 307 (451)
T ss_dssp --BEECCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEES
T ss_pred --EEeccccccCCCCCCCCCCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEec
Confidence 11111 1234578776899888888 56666666654 6779999999999989 99999999
Q ss_pred cCCCcc-cchhhhcCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCce-EEEEecCCCCeEEEe
Q 009316 361 RIQVEH-PVTEMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGI-ITAYLPAGGPFVRMD 438 (537)
Q Consensus 361 R~~g~~-~~~e~~tGidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~-i~~~~~~~~~~vr~d 438 (537)
|+++.. ...+..+|+|+.+.+++++.|...... ...++++...+.+...- ..|..|. |..+.... |++++.
T Consensus 308 R~g~~~~~~i~~~~g~d~~~~~~~~~~g~~~~~~----~~~~~~~~~~l~~~g~p--~~~~~g~~i~~~~~~~-~~~~v~ 380 (451)
T 2yrx_A 308 RFGDPEAQVVLPRLKTDLVEAVLAVMDGKELELE----WTDEAVLGVVLAAKGYP--GAYERGAEIRGLDRIS-PDALLF 380 (451)
T ss_dssp SCCTTHHHHHGGGBCSCHHHHHHHHHTTCCCCCC----BCSSEEEEEEEEETTTT--SSCCCCCEEBCGGGSC-TTSEEE
T ss_pred CCCCcHHHHHHHHcCCCHHHHHHHHhcCCCCCcc----ccCCceEEEEEecCCcC--CCCCCCCcCcCccccC-CCCEEE
Confidence 998763 345567999999999999999754321 11245555555432100 0122222 22221111 454432
Q ss_pred eeccCCCc------cCCCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009316 439 SHVYPDYV------VPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 439 ~~~~~G~~------v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
. .|.. +++ ..++|+|+++|+|.++|+++++++++.+.++|.
T Consensus 381 ~---~G~~~~~~~~~~~--~~rvg~v~~~g~~~~ea~~~~~~~~~~i~~~~~ 427 (451)
T 2yrx_A 381 H---AGTKREGGAWYTN--GGRVLLLAAKGETLAKAKEKAYEQLAAIDCDGL 427 (451)
T ss_dssp E---SSEEEETTEEEEC--SSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred e---CcccccCCeEEcC--CCeEEEEEEEeCCHHHHHHHHHHHhhccccCCe
Confidence 1 2333 222 346999999999999999999999999999875
No 34
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=100.00 E-value=2.6e-41 Score=360.53 Aligned_cols=388 Identities=16% Similarity=0.171 Sum_probs=291.9
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcC-CcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~G-i~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
++.+||||+|.|.....+++++++.+ +..+.+.. ..+.....++.+.+ ++.|.+.+++++++.++|+|
T Consensus 19 p~~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~p----gn~g~~~~~~~~~i-------~~~d~~~l~~~a~~~~id~v 87 (442)
T 3lp8_A 19 PGSMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAP----GREGMSGLADIIDI-------DINSTIEVIQVCKKEKIELV 87 (442)
T ss_dssp -CCEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEE----CCGGGTTTSEECCC-------CTTCHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCCCCEEEEEC----CChHHhhccceeec-------CcCCHHHHHHHHHHhCCCEE
Confidence 44579999999988888999998874 45555532 22334445555544 58899999999999999999
Q ss_pred EeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcE
Q 009316 148 HPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPV 224 (537)
Q Consensus 148 ~pg~g~lsE~~---~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~Pv 224 (537)
+|+. |++ .+++.+++.|++++||++++++.++||..+|++|+++|||+|++ ..+.+.+++.+++++++||+
T Consensus 88 v~g~----E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~--~~~~~~~ea~~~~~~~g~Pv 161 (442)
T 3lp8_A 88 VIGP----ETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKY--GYFVDTNSAYKFIDKHKLPL 161 (442)
T ss_dssp EECS----HHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCE--EEESSHHHHHHHHHHSCSSE
T ss_pred EECC----cHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCE--EEECCHHHHHHHHHHcCCcE
Confidence 9864 554 46788999999999999999999999999999999999999999 78899999999999999999
Q ss_pred EEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEecccCCcEEEEEEEEeCCCCEEEEeee-eee-e
Q 009316 225 MIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGER-DCS-I 300 (537)
Q Consensus 225 vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g--~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r-~~s-~ 300 (537)
||||..++||+||+++++.+|+.++++.+... ..|+ +..++||+||+| +|+++.++.|+. +++.+... +.. .
T Consensus 162 VvKp~~~~gg~GV~iv~~~eel~~a~~~~~~~--~~~g~~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~~~~~~~~~ 237 (442)
T 3lp8_A 162 VVKADGLAQGKGTVICHTHEEAYNAVDAMLVH--HKFGEAGCAIIIEEFLEG-KEISFFTLVDGS-NPVILGVAQDYKTI 237 (442)
T ss_dssp EEEESSCCTTTSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEESS-CEEEEEEEEECCEE
T ss_pred EEeECCCCCCCeEEEeCCHHHHHHHHHHHHhh--cccCCCCCeEEEEEeecC-cEEEEEEEECCC-eEEEeEEeEeeeec
Confidence 99999999999999999999999999887631 1243 368999999998 999999998865 56554331 110 1
Q ss_pred cc-----ccceeEEEcCCCCCCHHHHHHHHHH----HHHHHHHcCC--cceeEEEEEEeCCCCeEEEEEeccCCCc-ccc
Q 009316 301 QR-----RNQKLLEEAPSPALTPELRKAMGDA----AVAAAASIGY--IGVGTVEFLLDERGSFYFMEMNTRIQVE-HPV 368 (537)
Q Consensus 301 ~~-----~~~k~~e~~P~~~l~~~~~~~l~~~----a~~~~~alg~--~G~~~vEf~~~~~g~~~~lEiN~R~~g~-~~~ 368 (537)
.. ........+|++.+++++.+++.+. +.++++++|+ .|++++||+++++| +||||+|+|+++. +..
T Consensus 238 ~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~ 316 (442)
T 3lp8_A 238 GDNNKGPNTGGMGSYSKPNIITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIKKNE-PKLLEYNVRFGDPETQS 316 (442)
T ss_dssp EGGGEEEECSCSEEEECTTSSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHHH
T ss_pred ccCCCCCCCCCcEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-eEEEEEecCCCCCchhh
Confidence 01 1112356789887899999999887 8899999887 69999999999888 9999999999854 667
Q ss_pred hhhhcCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeCCCCCCCCCCCc-eEEEEec-CCCCeEEEe-ee--ccC
Q 009316 369 TEMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPG-IITAYLP-AGGPFVRMD-SH--VYP 443 (537)
Q Consensus 369 ~e~~tGidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G-~i~~~~~-~~~~~vr~d-~~--~~~ 443 (537)
+...+|.|+++.+++++.|+.... ++.+...+..+.+.+...... .+..| .|+.+.. ...+++.+- .+ ...
T Consensus 317 ~~~~~~~dl~~~~~~~~~G~l~~~---~~~~~~~~a~~vv~a~~gyp~-~~~~g~~i~g~~~~~~~~~~~~~~ag~~~~~ 392 (442)
T 3lp8_A 317 ILPRLNSDFLKLLSLTAKGKLGNE---SVELSKKAALCVVVASRGYPG-EYKKNSIINGIENIEKLPNVQLLHAGTRREG 392 (442)
T ss_dssp HGGGBCSCHHHHHHHHHHTCCSSC---CCCBCSCEEEEEEEEETTTTS-SCCSSCEEBSHHHHHTCSSEEEEESSEEEET
T ss_pred hHHHhCCCHHHHHHHHHcCCCCCC---CceeccCcEEEEEEccCCCCC-CCCCCCEeeCCcccccCCCcEEEEeeeeccC
Confidence 777789999999999999974322 223333333344444322111 12223 2332211 223455431 11 112
Q ss_pred CCccCCCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009316 444 DYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 444 G~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
|..+ .. ..+++.|++.|+|.++|+++++++++.+.++|.
T Consensus 393 ~~~~-~~-ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~ 431 (442)
T 3lp8_A 393 NNWV-SD-SGRVINVVAQGENLASAKHQAYAALDLLDWPDG 431 (442)
T ss_dssp TEEE-EC-SSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred CeEE-ec-CCeEEEEEEecCCHHHHHHHHHHHhcccCCCCC
Confidence 3222 22 356899999999999999999999999999985
No 35
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=100.00 E-value=1.1e-40 Score=354.76 Aligned_cols=386 Identities=18% Similarity=0.209 Sum_probs=285.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~ad-~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
++||||+|.|.....+++++++.+. ..+.+. ..+ .-....++ ..+.+ ++.|.+.+++++++.++|+|+
T Consensus 3 ~mkvlviG~ggre~ala~~l~~s~~v~~v~~~-pgn--~g~~~~~~~~~~~~-------~~~d~~~l~~~a~~~~id~vv 72 (431)
T 3mjf_A 3 AMNILIIGNGGREHALGWKAAQSPLADKIYVA-PGN--AGTALEPTLENVDI-------AATDIAGLLAFAQSHDIGLTI 72 (431)
T ss_dssp CEEEEEEECSHHHHHHHHHHTTCTTEEEEEEE-ECC--HHHHHCTTCEECCC-------CTTCHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-CCC--HHHhhhcccceecC-------CcCCHHHHHHHHHHhCcCEEE
Confidence 5799999999888889999988864 334332 111 11122232 22222 478999999999999999999
Q ss_pred eCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEE
Q 009316 149 PGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVM 225 (537)
Q Consensus 149 pg~g~lsE~~---~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~Pvv 225 (537)
|+. |.+ .+++.++++|++++||+++++++++||..+|++|+++|||+|++ ..+.+.+++.+++++++||+|
T Consensus 73 ~g~----e~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~--~~~~~~~ea~~~~~~~g~PvV 146 (431)
T 3mjf_A 73 VGP----EAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEY--QNFTDVEAALAYVRQKGAPIV 146 (431)
T ss_dssp ECS----HHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCE--EEESCHHHHHHHHHHHCSSEE
T ss_pred ECC----chHHHHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCe--EeeCCHHHHHHHHHHcCCeEE
Confidence 975 443 47889999999999999999999999999999999999999999 788999999999999999999
Q ss_pred EeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeee--eec
Q 009316 226 IKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC--SIQ 301 (537)
Q Consensus 226 vKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g--~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~--s~~ 301 (537)
|||..++||+||+++++.+|+.++++.+... ..|+ +..+++|+||+| +|+++.++.|++ +++.+..... ...
T Consensus 147 vKp~~~~gg~GV~iv~~~~el~~a~~~~~~~--~~~g~~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~~~~~~~~~~ 222 (431)
T 3mjf_A 147 IKADGLAAGKGVIVAMTQEEAETAVNDMLAG--NAFGDAGHRIVVEEFLDG-EEASFIVMVDGE-NVLPMATSQDHKRVG 222 (431)
T ss_dssp EEESSSCTTCSEEEECSHHHHHHHHHHHHTT--HHHHCCCCCEEEEECCCS-EEEEEEEEEESS-CEEECCCBEECCEEE
T ss_pred EEECCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccccCCCCeEEEEEeeCC-cEEEEEEEEcCC-EEEEEEeeEeceecc
Confidence 9999999999999999999999999887632 1233 358999999999 999999999876 7776654210 000
Q ss_pred cc-----cceeEEEcCCCCCCHHHHHHHHHH----HHHHHHHcCC--cceeEEEEEEeCCCCeEEEEEeccCCCcccchh
Q 009316 302 RR-----NQKLLEEAPSPALTPELRKAMGDA----AVAAAASIGY--IGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTE 370 (537)
Q Consensus 302 ~~-----~~k~~e~~P~~~l~~~~~~~l~~~----a~~~~~alg~--~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e 370 (537)
.. .......+|++.++++..+++.+. +.++++++|+ .|++++||+++++|++||||+|+|++ ++.++
T Consensus 223 ~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~ve~~~~~~g~~~viEiN~R~G--~~~~~ 300 (431)
T 3mjf_A 223 DGDTGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISADGQPKVIEFNCRFG--DPETQ 300 (431)
T ss_dssp TTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEECTTSCEEEEEECGGGS--TTTHH
T ss_pred cCCCCCCCCCceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEeCCCCeEEEEEecCCC--CcHHH
Confidence 00 111244679888899999988876 6788887765 79999999999888999999999995 55544
Q ss_pred ---hhcCCCHHHHHHHHHcCCCCCCCcccccc-ceeEEEEEEeeCCCCCCCCCCCc-eEEEEecCCCCeEEE-eee--cc
Q 009316 371 ---MISSVDLIEEQIHVAMGGKLRYKQEDIVL-QGHSIECRINAEDPFKNFRPGPG-IITAYLPAGGPFVRM-DSH--VY 442 (537)
Q Consensus 371 ---~~tGidl~~~~i~~a~G~~l~~~~~~~~~-~g~ai~~ri~ae~p~~~f~p~~G-~i~~~~~~~~~~vr~-d~~--~~ 442 (537)
..+|+|+++.+++++.|+.... ++.+ .++++.+.+.+... .. .+..| .|+.+.....+++.+ ..+ ..
T Consensus 301 ~i~~~~g~dl~~~~~~~~~G~l~~~---~~~~~~~~a~~vv~a~~gy-p~-~~~~g~~i~~~~~~~~~~~~~~~ag~~~~ 375 (431)
T 3mjf_A 301 PIMLRMRSDLVELCLAGTQGKLNEK---TSDWDERPSLGVVLAAGGY-PA-DYRQGDVIHGLPQQEVKDGKVFHAGTKLN 375 (431)
T ss_dssp HHHHHBCSCHHHHHHHHHTTCGGGC---CCCBCSSCEEEEEEEETTT-TS-CCCCCCBCBCCCSSCBTTEEEEESSEEEC
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCC---CccccCCcEEEEEecCCCc-Cc-cCCCCCEeeCCccccCCCcEEEEeeeEec
Confidence 7899999999999999984322 1222 34455444433211 10 11223 222222111135433 111 12
Q ss_pred CC-CccCCCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeeec
Q 009316 443 PD-YVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVP 485 (537)
Q Consensus 443 ~G-~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~ 485 (537)
.| ..++. ..+++.|++.|+|.++|.++++++++.+.++|..
T Consensus 376 ~~~~~~~~--ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~~ 417 (431)
T 3mjf_A 376 GNHEVVTN--GGRVLCVTALGETVAQAQQYAYQLAEGIQWEGVF 417 (431)
T ss_dssp TTSCEEEC--SSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CCCEEEec--CCeEEEEEEecCCHHHHHHHHHHHhccCCCCCce
Confidence 23 33322 4568999999999999999999999999999853
No 36
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=100.00 E-value=2.3e-41 Score=358.94 Aligned_cols=378 Identities=19% Similarity=0.222 Sum_probs=279.1
Q ss_pred CEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa-~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
+||||+|+|.....+++++ +++|++++++++. +.....++| .+.+ ++.|.+++++++++.++|+|+|+
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~---~~~~~~~~~-~~~~-------~~~d~~~l~~~~~~~~~d~v~~~ 69 (422)
T 2xcl_A 1 MNVLIIGKGGREHTLAWKAAQSSLVENVFAAPG---NDGMAASAQ-LVNI-------EESDHAGLVSFAKQNQVGLTIVG 69 (422)
T ss_dssp CEEEEEECSHHHHHHHHHHTTCTTCSEEEEEEC---CGGGTTTCE-ECCC-------CTTCHHHHHHHHHHTTEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEeCC---Chhhhhhcc-cccc-------CcCCHHHHHHHHHHcCCCEEEEC
Confidence 4799999997666666655 5689999888643 222344555 3322 57899999999999999999986
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 009316 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 151 ~g~lsE~~---~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvK 227 (537)
. |+. .+++.+++.|++++||++++++.+.||..+|++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 70 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~P~vvK 143 (422)
T 2xcl_A 70 P----EVPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEY--ETFTSFDEAKAYVQEKGAPIVIK 143 (422)
T ss_dssp S----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHHHCSSEEEE
T ss_pred C----cHHHHHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHhcCCCEEEE
Confidence 4 554 46778889999999999999999999999999999999999998 67899999999999999999999
Q ss_pred ecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEecccCCcEEEEEEEEeCCCCEEEEee-eee-eecc-
Q 009316 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGE-RDC-SIQR- 302 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g--~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~-r~~-s~~~- 302 (537)
|..|+||+||+++++.+|+.++++.+... ..|+ +..+++|+||+| +|++|.++.|++ .+..+.. +.. ....
T Consensus 144 p~~~~~g~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~g-~E~sv~~~~dG~-~~~~~~~~~~~~~~~~~ 219 (422)
T 2xcl_A 144 ADGLAAGKGVTVAMTEEEAIACLHDFLED--EKFGDASASVVIEEYLSG-EEFSLMAFVKGE-KVYPMVIAQDHKRAFDG 219 (422)
T ss_dssp ESSCGGGTCEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEETT-EEEECCCBEEEEEEEGG
T ss_pred eCCCCCCCcEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCcC-cEEEEEEEEcCC-EEEecceeeeeehhcCC
Confidence 99999999999999999999999877541 1233 368999999998 999999998643 2333222 110 0000
Q ss_pred ----ccceeEEEcCCCCCCHHHHHHHHH-HHHHHHHHc-----CCcceeEEEEEEeCCCCeEEEEEeccCCCcc-cchhh
Q 009316 303 ----RNQKLLEEAPSPALTPELRKAMGD-AAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PVTEM 371 (537)
Q Consensus 303 ----~~~k~~e~~P~~~l~~~~~~~l~~-~a~~~~~al-----g~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~-~~~e~ 371 (537)
........+|++.+++++.+++.+ .+.++++++ +|.|++++||+++++| +||+|||||+++.. ...+.
T Consensus 220 ~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~~~~g-~~viEiN~R~g~~~~~~i~~ 298 (422)
T 2xcl_A 220 DKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLTENG-SKVIEFNARFGDPETQVVLP 298 (422)
T ss_dssp GEEEEEEEEEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTTHHHHGG
T ss_pred CCCCCCCCCeeEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEEeCCC-cEEEEEecCCCCcHHHHHHH
Confidence 011122457877689988888854 677777665 6779999999999989 99999999998763 34566
Q ss_pred hcCCCHHHHHHHHHcCCCCCCCccccccceeEEEEEEeeC----CCCCCCCCCCceEEEEecCCCCeEEEeeeccCCC--
Q 009316 372 ISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAE----DPFKNFRPGPGIITAYLPAGGPFVRMDSHVYPDY-- 445 (537)
Q Consensus 372 ~tGidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae----~p~~~f~p~~G~i~~~~~~~~~~vr~d~~~~~G~-- 445 (537)
.+|+|+.+.+++++.|..... . ...++++.+.+.++ ++.+++ + +..+.... |++++.. .|.
T Consensus 299 ~~g~d~~~~~~~~~~g~l~~~---~-~~~~~~~~~~~~~~g~~~~~~~g~-~----i~~~~~~~-~~~~~~~---~g~~~ 365 (422)
T 2xcl_A 299 RMESDLVQVLLDLLDDKEVDL---R-WKDTAAVSVVLASEGYPESYAKGT-P----IGSLAAET-EQVVVFH---AGTKA 365 (422)
T ss_dssp GBCSCHHHHHHHHHTTCCCCC---C-BCSCEEEEEEEEETTTTSCCCSCC-B----CCCCCCCS-SSEEEEE---SSEEE
T ss_pred hcCCCHHHHHHHHHcCCcCcc---c-ccCCceEEEEEECCCCCCCCCCCC-c----ccCcccCC-CCcEEEE---eeeEe
Confidence 799999999999999974422 1 12345555566543 222222 1 11111111 5665421 232
Q ss_pred ---ccCCCCCCccEEEEEEcCCHHHHHHHHHHhhhcceEeeec
Q 009316 446 ---VVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVP 485 (537)
Q Consensus 446 ---~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~ 485 (537)
...+.+++ +++|+++|+|.++|+++++++++.+.++|..
T Consensus 366 ~~~~~~~~~~r-~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~~ 407 (422)
T 2xcl_A 366 EGGEFVTNGGR-VANVTAFDETFEAARDRVYKAVDEIFKPGLF 407 (422)
T ss_dssp CSSSEEECSSE-EEEEEEEESSHHHHHHHHHHHHHHHCCTTEE
T ss_pred eCCEEEeCCCc-eEEEEEEeCCHHHHHHHHHHHHhcceeCCcE
Confidence 22234455 8899999999999999999999999998743
No 37
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=7.1e-39 Score=374.37 Aligned_cols=321 Identities=19% Similarity=0.274 Sum_probs=258.5
Q ss_pred CCCEEEEEcCcHH-----------HHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHH
Q 009316 70 RQEKILVANRGEI-----------AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 70 ~~~~iLI~~~g~i-----------a~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~ 138 (537)
+.+||||+|+|++ +++++++++++|+++++++++++..+.+...+|..+ +. ..+.+.+.++
T Consensus 558 ~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~~G~~vi~v~~np~~~s~~~~~ad~~~-~~-------p~~~e~v~~i 629 (1073)
T 1a9x_A 558 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLY-FE-------PVTLEDVLEI 629 (1073)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEE-CC-------CCSHHHHHHH
T ss_pred cCcEEEEecCCccccccccccchhHHHHHHHHHhcCCEEEEEecCCcccccccccccEEE-ec-------cchhhhhhhh
Confidence 4689999999985 568899999999999999888877766777888876 32 3678999999
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHH
Q 009316 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLAD 218 (537)
Q Consensus 139 a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~ 218 (537)
++..++|+|+|.+|... ...+++.+++.|++++||+++++..+.||..++++|+++|||+|++ ..+.+.+++.++++
T Consensus 630 ~~~e~~d~Vi~~~g~~~-~~~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~--~~~~s~eea~~~~~ 706 (1073)
T 1a9x_A 630 VRIEKPKGVIVQYGGQT-PLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPAN--ATVTAIEMAVEKAK 706 (1073)
T ss_dssp HHHHCCSEEECSSSTHH-HHTTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCE--EECCSHHHHHHHHH
T ss_pred hhhcCcceEEeecCCch-HHHHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCc--eEECCHHHHHHHHH
Confidence 99999999999876421 1356788899999999999999999999999999999999999999 78899999999999
Q ss_pred hcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeee
Q 009316 219 ELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC 298 (537)
Q Consensus 219 ~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~ 298 (537)
++|||+||||..|+||+||.+|++.+|+.++++.+... +++.+++||+||+|.+|++|+++.|+. .++..+..+.
T Consensus 707 ~ig~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~~----~~~~~vlvEefI~g~~E~~V~~l~d~~-~v~~~~i~e~ 781 (1073)
T 1a9x_A 707 EIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSV----SNDAPVLLDHFLDDAVEVDVDAICDGE-MVLIGGIMEH 781 (1073)
T ss_dssp HHCSSEEEEC-------CEEEECSHHHHHHHHHHCC------------EEEBCCTTCEEEEEEEEECSS-CEEEEEEEEE
T ss_pred HcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHhh----CCCCcEEEEEccCCCcEEEEEEEEECC-eEEEEeeEEE
Confidence 99999999999999999999999999999998875432 235789999999996699999999875 4444433221
Q ss_pred eecc---ccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCC
Q 009316 299 SIQR---RNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSV 375 (537)
Q Consensus 299 s~~~---~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGi 375 (537)
+.+ +........|++.++++..+++.+.+.++++++|+.|++++||+++ +|++||||||||+++++++++.++|+
T Consensus 782 -~~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v~-~~~~~viEvNpR~~~~~~~~~~~tGi 859 (1073)
T 1a9x_A 782 -IEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVK-NNEVYLIEVNPRAARTVPFVSKATGV 859 (1073)
T ss_dssp -SSCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-SSCEEEEEEECSCCTTHHHHHHHHSC
T ss_pred -EeccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEE-CCeEEEEEEECCCccHHHHHHHHHCc
Confidence 111 1122345567767999999999999999999999999999999997 56699999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCC---CCccccccceeEEEEEEe
Q 009316 376 DLIEEQIHVAMGGKLR---YKQEDIVLQGHSIECRIN 409 (537)
Q Consensus 376 dl~~~~i~~a~G~~l~---~~~~~~~~~g~ai~~ri~ 409 (537)
|+++.++++++|.+++ +.+. ..+.++++.++++
T Consensus 860 ~l~~~~~~~~~G~~l~~~~~~~~-~~~~~~~vk~~~~ 895 (1073)
T 1a9x_A 860 PLAKVAARVMAGKSLAEQGVTKE-VIPPYYSVKEVVL 895 (1073)
T ss_dssp CHHHHHHHHHTTCCHHHHTCCSC-CCCSSEEEEEEEC
T ss_pred CHHHHHHHHHcCCCchhcccCcC-cCCCeEEEEeccC
Confidence 9999999999999873 2222 2236788888886
No 38
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=6.4e-37 Score=314.05 Aligned_cols=294 Identities=15% Similarity=0.155 Sum_probs=213.8
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHc-C-CcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEM-G-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~-G-i~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
||.++|||+|+|.. ..+++++++. | +++++++++ +.++...++|+.+.++ ..++..+.+.+++++++.++|+
T Consensus 2 m~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~--~~~~~~~~~d~~~~~~---~~~~~~~~~~l~~~~~~~~~d~ 75 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCS--PLASALYMADQHYIVP---KIDEVEYIDHLLTLCQDEGVTA 75 (331)
T ss_dssp TTCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESC--TTCGGGGGSSSEEECC---CTTSTTHHHHHHHHHHHHTCCE
T ss_pred CccceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCC--CcchhHHhhhceecCC---CCCChhHHHHHHHHHHHcCCCE
Confidence 45579999999876 5788888886 7 888888654 4455667899888663 1122345899999999999999
Q ss_pred EEeCCCccccc-HHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHH--HhcCCc
Q 009316 147 LHPGYGFLAEN-AVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLA--DELGFP 223 (537)
Q Consensus 147 V~pg~g~lsE~-~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~--~~ig~P 223 (537)
|+|+++..... +..++.++..|++++||+++++..+.||..++++|+++|||+|++. . +.+++.++. ++++||
T Consensus 76 vi~~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~--~--~~~~~~~~~~~~~~~~P 151 (331)
T 2pn1_A 76 LLTLIDPELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTY--A--TMASFEEALAAGEVQLP 151 (331)
T ss_dssp EEESSHHHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEE--S--SHHHHHHHHHTTSSCSC
T ss_pred EEeCCchhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcEE--e--cHHHhhhhhhcccCCCC
Confidence 99987532211 2345677778999999999999999999999999999999999973 2 466666666 478999
Q ss_pred EEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEe-CCCCEEEEeeeeeeecc
Q 009316 224 VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLAD-KYGNVVHFGERDCSIQR 302 (537)
Q Consensus 224 vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d-~~G~vv~~~~r~~s~~~ 302 (537)
+||||..|+||+|++++++.+|+.++++. ...+++|+||+| +|+++.++.| .+|+++.+..+.+...+
T Consensus 152 ~vvKp~~g~g~~gv~~v~~~~el~~~~~~----------~~~~lvee~i~G-~e~~v~~~~d~~~G~~~~~~~~~~~~~~ 220 (331)
T 2pn1_A 152 VFVKPRNGSASIEVRRVETVEEVEQLFSK----------NTDLIVQELLVG-QELGVDAYVDLISGKVTSIFIKEKLTMR 220 (331)
T ss_dssp EEEEESBC---------------------------------CEEEEECCCS-EEEEEEEEECTTTCCEEEEEEEEEEEEE
T ss_pred EEEEeCCCCCCCCeEEeCCHHHHHHHHHh----------CCCeEEEecCCC-cEEEEEEEEecCCCeEEEEEEEEEEEec
Confidence 99999999999999999999999887753 268999999999 9999999998 77888877665543222
Q ss_pred ccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHH
Q 009316 303 RNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQI 382 (537)
Q Consensus 303 ~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i 382 (537)
.. . ....+++ . .+++.+.+.++++++|+.|++++||+.+ +|++||+|||||+++..+ .+..+|+|++++++
T Consensus 221 ~g-~-~~~~~~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~-~g~~~~iEiN~R~~g~~~-~~~~~G~~~~~~~~ 291 (331)
T 2pn1_A 221 AG-E-TDKSRSV-L----RDDVFELVEHVLDGSGLVGPLDFDLFDV-AGTLYLSEINPRFGGGYP-HAYECGVNFPAQLY 291 (331)
T ss_dssp TT-E-EEEEEEE-C----CHHHHHHHHHHHTTTCCCEEEEEEEEEE-TTEEEEEEEESSCCTTHH-HHHHTTCCHHHHHH
T ss_pred CC-c-eeEeEEe-c----cHHHHHHHHHHHHHhCCcceEEEEEEEc-CCCEEEEEEeCCCCCchH-HHHHcCCCHHHHHH
Confidence 21 1 1112211 2 2567789999999999999999999964 566999999999988876 47789999999999
Q ss_pred HHHcCCCCCC
Q 009316 383 HVAMGGKLRY 392 (537)
Q Consensus 383 ~~a~G~~l~~ 392 (537)
+.++|.++..
T Consensus 292 ~~~~g~~~~~ 301 (331)
T 2pn1_A 292 RNLMHEINVP 301 (331)
T ss_dssp HHHTTCCCCC
T ss_pred HHHcCCCCCc
Confidence 9999998753
No 39
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=100.00 E-value=5.2e-38 Score=326.20 Aligned_cols=301 Identities=18% Similarity=0.193 Sum_probs=224.7
Q ss_pred CCEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCchhh-----------ccC----EEEEcCCCCCC
Q 009316 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-----------LAD----ESVCIGEAPSS 126 (537)
Q Consensus 71 ~~~iLI~~~g~---------ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-----------~ad----~~~~i~~~~~~ 126 (537)
.|||.|+-+|. .|..|++++++.||+++.|+.+.+....+.. ..| ....+.+....
T Consensus 3 kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (357)
T 4fu0_A 3 NKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGITRSGEWYHYTGEKEKILNNTWFEDSKNLCPVVVSQNRSV 82 (357)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTCCEEEECSCTHHHHTTCGGGCGGGEEEEEECCCTTT
T ss_pred CCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEEeCCCceeecCCCHHHhhcCcchhhhhccccccccccccc
Confidence 46787774442 2567999999999999999766553221111 111 11111111111
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCc
Q 009316 127 QSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG 205 (537)
Q Consensus 127 ~sy~~~~~i~~~a~~~~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~ 205 (537)
.. ..+......+..++|+|+|. +|+++|+..++.+|+.+|++|+||++.++..+.||..+|++++++|||+|++ .
T Consensus 83 ~~--~~~~~~~~~~~~~~D~vf~~l~G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~ 158 (357)
T 4fu0_A 83 KG--FLEIASDKYRIIKVDLVFPVLHGKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKS--V 158 (357)
T ss_dssp CE--EEEC----CEEEECSEEEECCCSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCE--E
T ss_pred cc--hhhhhhhhHhhcCCCEEEECCcCccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCE--E
Confidence 01 11223344455679999998 8999999999999999999999999999999999999999999999999998 3
Q ss_pred CCCC---HHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEE
Q 009316 206 LLQS---TEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQV 282 (537)
Q Consensus 206 ~v~~---~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v 282 (537)
.+.+ ..++.++++++|||+||||+.|++|+||.+|++.+||.++++.+... +..+++|+||+| +|++|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~~------~~~vlvE~~i~G-~e~~v~v 231 (357)
T 4fu0_A 159 TFKRFNEEAAMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFEH------DTEVIVEETING-FEVGCAV 231 (357)
T ss_dssp EEEGGGHHHHHHHHHHHCCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTTT------CSEEEEEECCCS-EEEEEEE
T ss_pred eecCCChHHHHHHHHHhcCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhcc------CCeEEEEEecCC-EEEEEEE
Confidence 3332 33456677899999999999999999999999999999998876542 578999999999 9999999
Q ss_pred EEeCCCCEEEEeee--eeeecccccee-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEE
Q 009316 283 LADKYGNVVHFGER--DCSIQRRNQKL-----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYF 355 (537)
Q Consensus 283 ~~d~~G~vv~~~~r--~~s~~~~~~k~-----~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~ 355 (537)
++++.+.+..+.+. .+..+++.+|. ....|+. ++++..+++.+.|.+++++||+.|+++|||+++++|++||
T Consensus 232 l~~~~~~~~~v~~~~~~~~~~d~~~k~~~~~~~~~~pa~-l~~~~~~~i~~~A~~~~~aLg~~G~~~VDf~~~~dg~~~v 310 (357)
T 4fu0_A 232 LGIDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPAR-IDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYTPSGEIVF 310 (357)
T ss_dssp EESSSEEECCCEEEEECHHHHTSCSBCSSCCEEEESSCS-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEE
T ss_pred EecCCceEEEEEEEEcccccccccccccCCCceEecCCC-CCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEeCCCCEEE
Confidence 98866444333332 23333443332 2345665 9999999999999999999999999999999999999999
Q ss_pred EEEeccCCCc----ccchhhhcCCCHHHHHHH
Q 009316 356 MEMNTRIQVE----HPVTEMISSVDLIEEQIH 383 (537)
Q Consensus 356 lEiN~R~~g~----~~~~e~~tGidl~~~~i~ 383 (537)
+|||||++.+ .|..-.++|+|+.++.-+
T Consensus 311 lEvNt~PG~t~~S~~p~~~~~~G~~~~~li~~ 342 (357)
T 4fu0_A 311 NEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDK 342 (357)
T ss_dssp EEEESSCCCSTTCHHHHHHHTTTCCHHHHHHH
T ss_pred EEEeCCCCCCcccHHHHHHHHhCcCHHHHHHH
Confidence 9999999765 233445689987665433
No 40
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=100.00 E-value=3.5e-35 Score=299.88 Aligned_cols=277 Identities=20% Similarity=0.220 Sum_probs=217.0
Q ss_pred CCCCEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHH
Q 009316 69 CRQEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 69 ~~~~~iLI~~~g~---------ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a 139 (537)
.|++||+|+.+|. .+..+++++++.|++++.+++... . + . ..
T Consensus 11 ~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~-~------------~----------~------~l 61 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER-P------------L----------S------AL 61 (317)
T ss_dssp GGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS-C------------T----------T------HH
T ss_pred hhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc-h------------H----------H------Hh
Confidence 3567888888754 478999999999999999962211 0 0 0 11
Q ss_pred HHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHH-
Q 009316 140 ISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLA- 217 (537)
Q Consensus 140 ~~~~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~- 217 (537)
+..++|+|+|. +|...|+..++..++.+|++++|++++++..+.||..++++|+++|||+|++ ..+.+.+++.+++
T Consensus 62 ~~~~~D~v~~~~hg~~ge~~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~ 139 (317)
T 4eg0_A 62 KDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPF--ETVMRGDDYAARAT 139 (317)
T ss_dssp HHTTCCEEEECCCSGGGTSSHHHHHHHHHTCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEETTSCHHHHHH
T ss_pred hhcCCCEEEEcCCCCCCchHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCE--EEEECchhHHHHHH
Confidence 34679999987 4556688889999999999999999999999999999999999999999998 5666666666666
Q ss_pred ---HhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccc-CCcEEEEEEEEeCCCCEEEE
Q 009316 218 ---DELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ-NPRHIEFQVLADKYGNVVHF 293 (537)
Q Consensus 218 ---~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~-g~~ei~v~v~~d~~G~vv~~ 293 (537)
+++|||+||||..|+||+|+.++++.+|+.++++.+.. .+..++||+||+ | +|++|.+++++.+.++.+
T Consensus 140 ~~~~~~g~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~i~~G-~E~~v~vl~~~~~~~~~i 212 (317)
T 4eg0_A 140 DIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAAT------HDKIVIVEKSIEGG-GEYTACIAGDLDLPLIKI 212 (317)
T ss_dssp HHHHHHCSCEEEEECC-----CCEEECSGGGHHHHHHHHTT------TCSEEEEEECCCSS-EEEEEEEETTCCCCCEEE
T ss_pred HHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------CCCeEEEEcCCCCC-cEEEEEEECCcccceEEE
Confidence 78999999999999999999999999999999987542 257899999999 7 999999998766666555
Q ss_pred eeeeeeeccccc-----eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCc---
Q 009316 294 GERDCSIQRRNQ-----KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVE--- 365 (537)
Q Consensus 294 ~~r~~s~~~~~~-----k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~--- 365 (537)
..... +..... .....+|+. ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||||++..
T Consensus 213 ~~~~~-~~~~~~k~~~g~~~~~~P~~-l~~~~~~~l~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~~pg~t~~s 290 (317)
T 4eg0_A 213 VPAGE-FYDYHAKYVANDTQYLIPCG-LPAEQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDHS 290 (317)
T ss_dssp EC----------------CEEESSCS-SCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTCCEEEEEEESSCCCSTTS
T ss_pred eeCCc-eechhhcccCCCeeEEcCCC-CCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEeCCCCEEEEEeeCCCCCCccc
Confidence 33221 111111 234567886 99999999999999999999999999999999988999999999999754
Q ss_pred -ccchhhhcCCCHHHHHHHHH
Q 009316 366 -HPVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 366 -~~~~e~~tGidl~~~~i~~a 385 (537)
.|......|+|+.++..++.
T Consensus 291 ~~p~~~~~~G~~~~~l~~~li 311 (317)
T 4eg0_A 291 LPPKAARSIGIGYSELVVKVL 311 (317)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHH
Confidence 23344568999998877764
No 41
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=100.00 E-value=1.1e-35 Score=311.36 Aligned_cols=303 Identities=18% Similarity=0.212 Sum_probs=227.2
Q ss_pred CCCCEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCchhhcc-----------------CEEEEcCC
Q 009316 69 CRQEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA-----------------DESVCIGE 122 (537)
Q Consensus 69 ~~~~~iLI~~~g~---------ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~a-----------------d~~~~i~~ 122 (537)
|+.+||.|+-+|. .|..|++++++.|++++.++.+.+......... ...+.+.+
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLHADDPARIALHRSGRGVALLP 99 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECGGGSEESTTCTTTCEECCCCCCEEECT
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECCCCCEEecccchhhccccccccccccccccceeecc
Confidence 3345776665443 267899999999999999976554211000000 01111211
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 009316 123 APSSQSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVP 201 (537)
Q Consensus 123 ~~~~~sy~~~~~i~~~a~~~~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~ 201 (537)
......+.... ...+..++|+|+|. +|...|+..++.+++.+|++++|++++++..+.||..+|++++++|||+|+
T Consensus 100 ~~~~~~~~~~~---~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~ 176 (386)
T 3e5n_A 100 GAQQQQLRPIQ---PEQALAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAP 176 (386)
T ss_dssp TCSSSCEEECC-----CCCCCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCCBCC
T ss_pred Cccccceeccc---cccccCCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCCC
Confidence 11111110000 00123579999999 899999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCHH----HHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcE
Q 009316 202 GSDGLLQSTE----EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRH 277 (537)
Q Consensus 202 ~~~~~v~~~~----~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~e 277 (537)
+ ..+.+.+ ++.++.+++|||+||||..|++|+|+.+|++.+||.++++.+.. .+..++||+||+| +|
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~------~~~~vlVEe~I~G-~E 247 (386)
T 3e5n_A 177 F--VCFDRHTAAHADVDTLIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALA------YDHKVLVEAAVAG-RE 247 (386)
T ss_dssp E--EEEEHHHHTTCCHHHHHHHHCSSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTT------TCSEEEEEECCCS-EE
T ss_pred E--EEEeCcccchhhHHHHHHhcCCCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHh------CCCcEEEEcCCCC-eE
Confidence 8 6667766 67788889999999999999999999999999999999987643 2578999999999 99
Q ss_pred EEEEEEEeCCCCEEEEeeeeee--eccccce------eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC
Q 009316 278 IEFQVLADKYGNVVHFGERDCS--IQRRNQK------LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE 349 (537)
Q Consensus 278 i~v~v~~d~~G~vv~~~~r~~s--~~~~~~k------~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~ 349 (537)
++|.++.++...++..++..+. ++....+ .....|+. ++++..+++.+.+.++++++|+.|++++||++++
T Consensus 248 ~~v~vl~~~~~~~~~~gei~~~~~~~d~~~ky~~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~ 326 (386)
T 3e5n_A 248 IECAVLGNAVPHASVCGEVVVHDAFYSYATKYISEHGAEIVIPAD-IDAQTQQRIQQIAVQAYQALGCAGMARVDVFLCA 326 (386)
T ss_dssp EEEEEECSSSCEEEEEEEECC-----------------CEESSCS-SCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECT
T ss_pred EEEEEEeCCCceEEEeEEEEeCCcccchhcccCCCCCeEEEECCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEEC
Confidence 9999998876666666665443 1222222 23356887 9999999999999999999999999999999998
Q ss_pred CCCeEEEEEeccCCCc----ccchhhhcCCCHHHHHHHH
Q 009316 350 RGSFYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 350 ~g~~~~lEiN~R~~g~----~~~~e~~tGidl~~~~i~~ 384 (537)
+|++||+|||||++.. .|.....+|+|+.++..++
T Consensus 327 dg~~~vlEiN~~PG~t~~S~~p~~~~~~Gi~~~~li~~l 365 (386)
T 3e5n_A 327 DGRIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRL 365 (386)
T ss_dssp TCCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred CCcEEEEEeECCCCCCccCHHHHHHHHhCCCHHHHHHHH
Confidence 8999999999999754 2344456899987765444
No 42
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=100.00 E-value=2.8e-34 Score=300.23 Aligned_cols=302 Identities=18% Similarity=0.215 Sum_probs=229.0
Q ss_pred CCEEEEEcCc---H------HHHHHHHHH-HHcCCcEEEEecCCCCCCchh-------------hcc-CEEEEcCCCCCC
Q 009316 71 QEKILVANRG---E------IAVRVIRTA-HEMGIPCVAVYSTIDKDALHV-------------KLA-DESVCIGEAPSS 126 (537)
Q Consensus 71 ~~~iLI~~~g---~------ia~~ii~aa-~~~Gi~~v~v~~~~d~~~~~~-------------~~a-d~~~~i~~~~~~ 126 (537)
.+||+|+.+| | .+..+++++ ++.|++++.++.+.+...... .+. +....+ ..
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 78 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFMKTV----DA 78 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEECTTSCBCCHHHHHHHHTTCCHHHHHHHHHTSC----CT
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEcCCCCEEecccccccccccchhhhcccccccc----cc
Confidence 3578888866 2 378899999 999999999976554321100 011 000000 00
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCc
Q 009316 127 QSYLLIPNVLSAAISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG 205 (537)
Q Consensus 127 ~sy~~~~~i~~~a~~~~~d~V~pg~-g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~ 205 (537)
..+.+...+.. +..++|+|+|.. |...|+..++.+++.+|++++|++++++..+.||..++++|+++|||+|++ .
T Consensus 79 ~~~~~~~~~~~--~~~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~ 154 (377)
T 1ehi_A 79 SDPLARIHALK--SAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKY--I 154 (377)
T ss_dssp TCTTCTTGGGG--TTCCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCE--E
T ss_pred ccccCcchhhc--cccCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCE--E
Confidence 00111101111 135799999996 777888888899999999999999999999999999999999999999998 5
Q ss_pred CCCCHHH----HHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEE
Q 009316 206 LLQSTEE----AVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQ 281 (537)
Q Consensus 206 ~v~~~~~----~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~ 281 (537)
.+.+.++ +.++++++|||+||||..|+||+||.+|++.+||.++++.+... +..++||+||+|.+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~g~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~vlvEe~I~G~~E~~v~ 228 (377)
T 1ehi_A 155 VVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQY------DYKVLIEEAVNGARELEVG 228 (377)
T ss_dssp EECTTGGGGCCHHHHHHHHCSCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTTT------CSCEEEEECCCCSCEEEEE
T ss_pred EEeccccchHHHHHHHHhcCCCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHhc------CCcEEEEcCCCCCceEEEE
Confidence 5665543 66677889999999999999999999999999999998875432 4789999999997899999
Q ss_pred EEEeCCCCEEEEeeeeee-------eccccc------eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe
Q 009316 282 VLADKYGNVVHFGERDCS-------IQRRNQ------KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD 348 (537)
Q Consensus 282 v~~d~~G~vv~~~~r~~s-------~~~~~~------k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~ 348 (537)
+++++++.++..++..+. +..... ......|+. ++++..+++.+.+.++++++|+.|++++||+++
T Consensus 229 vl~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~ 307 (377)
T 1ehi_A 229 VIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQ-LSPEVTKEVKQMALDAYKVLNLRGEARMDFLLD 307 (377)
T ss_dssp EEESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC
T ss_pred EEcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEe
Confidence 999876566666665441 111111 234467887 999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeccCCCcc----cchhhhcCCCH---HHHHHHHHcC
Q 009316 349 ERGSFYFMEMNTRIQVEH----PVTEMISSVDL---IEEQIHVAMG 387 (537)
Q Consensus 349 ~~g~~~~lEiN~R~~g~~----~~~e~~tGidl---~~~~i~~a~G 387 (537)
++|++||+|||||+++.. |....++|+|+ +..+++.+++
T Consensus 308 ~~g~~~vlEiN~rpg~t~~s~~p~~~~a~G~~~~~l~~~li~~al~ 353 (377)
T 1ehi_A 308 ENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFE 353 (377)
T ss_dssp TTCCEEEEEEESSCCCSTTCGGGTGGGGGTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 888999999999998652 43445799999 5556666664
No 43
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=100.00 E-value=1.3e-34 Score=301.44 Aligned_cols=233 Identities=20% Similarity=0.278 Sum_probs=197.6
Q ss_pred cCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHH----HHHHH
Q 009316 142 RGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE----EAVKL 216 (537)
Q Consensus 142 ~~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~----~~~~~ 216 (537)
.++|+|+|. +|...|+..++.+++.+|++++|++++++..+.||..+|++++++|||+|++ ..+.+.+ ++.++
T Consensus 97 ~~~D~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~ 174 (364)
T 3i12_A 97 PTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPF--ITLTRTNRHAFSFAEV 174 (364)
T ss_dssp CCCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCE--EEEETTTGGGCCHHHH
T ss_pred CCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCE--EEEEccccchhhHHHH
Confidence 579999999 8999999999999999999999999999999999999999999999999998 5666655 77778
Q ss_pred HHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeee
Q 009316 217 ADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGER 296 (537)
Q Consensus 217 ~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r 296 (537)
++++|||+||||..|++|.|+.++++.+|+.++++.+... +..++||+||+| +|++|.++.++...+...++.
T Consensus 175 ~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~G-~E~~v~vl~~~~~~~~~~~ei 247 (364)
T 3i12_A 175 ESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEF------DHKVVVEQGIKG-REIECAVLGNDNPQASTCGEI 247 (364)
T ss_dssp HHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEEESSSCEEEEEEEE
T ss_pred HHhcCCCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHhc------CCcEEEEcCcCC-eEEEEEEEeCCCceEeeeEEE
Confidence 8899999999999999999999999999999999887653 478999999999 999999998876555555543
Q ss_pred ee--eeccccc-----e-eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCc---
Q 009316 297 DC--SIQRRNQ-----K-LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVE--- 365 (537)
Q Consensus 297 ~~--s~~~~~~-----k-~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~--- 365 (537)
.. .++.... . .....|++ ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||+|++.+
T Consensus 248 ~~~~~~~~~~~ky~~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~vlEiN~~Pg~t~~s 326 (364)
T 3i12_A 248 VLNSEFYAYDTKYIDDNGAQVVVPAQ-IPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTADNEVVINEINTLPGFTNIS 326 (364)
T ss_dssp ECCTTCC--TTTTSGGGGCEEESSCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCCSTTC
T ss_pred ecCCCccCHHHcccCCCceEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEecCCCEEEEEeeCCCCCCCCC
Confidence 11 0111111 1 45567887 99999999999999999999999999999999988999999999999764
Q ss_pred -ccchhhhcCCCHHHHHHHH
Q 009316 366 -HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 366 -~~~~e~~tGidl~~~~i~~ 384 (537)
.|.....+|+|+.++..++
T Consensus 327 ~~p~~~~a~G~~~~~l~~~l 346 (364)
T 3i12_A 327 MYPKLWQASGLGYTDLISRL 346 (364)
T ss_dssp HHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHhCcCHHHHHHHH
Confidence 2444566899988865444
No 44
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=100.00 E-value=1.7e-35 Score=308.01 Aligned_cols=299 Identities=18% Similarity=0.221 Sum_probs=221.8
Q ss_pred CCEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCchhh----ccC--EEEEcCCCCCCCCCCCHHHH
Q 009316 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVK----LAD--ESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 71 ~~~iLI~~~g~---------ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~----~ad--~~~~i~~~~~~~sy~~~~~i 135 (537)
.+||+|+.+|. .+..+++++++.|++++.++.+.+....... .++ ..+.+. .+....+ +.+
T Consensus 3 ~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~ 78 (364)
T 2i87_A 3 KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTDELHLE-NGEALEI---SQL 78 (364)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEECTTCCEEEECCCCSCCCSGGGSCGG-GSEEECS---SGG
T ss_pred CcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEcCCCCEEeccccccccccchhhccc-ccccccc---ccc
Confidence 45788887663 4688999999999999999866543211000 000 001010 0000011 112
Q ss_pred HHH-HHHcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHH--
Q 009316 136 LSA-AISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE-- 211 (537)
Q Consensus 136 ~~~-a~~~~~d~V~pg~-g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~-- 211 (537)
+.. .+..++|+|+|.. |...|+..++..++..|++++|++++++..+.||..++++|+++|||+|++ ..+.+.+
T Consensus 79 ~~~~~~~~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~ 156 (364)
T 2i87_A 79 LKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPY--ISFLRSEYE 156 (364)
T ss_dssp GGBCTTSSBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCE--EEEEHHHHH
T ss_pred ccccccccCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEechhhc
Confidence 110 0345799999985 777888888999999999999999999999999999999999999999998 5555554
Q ss_pred -----HHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeC
Q 009316 212 -----EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADK 286 (537)
Q Consensus 212 -----~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~ 286 (537)
++.++++++|||+||||..|++|+||.+|++.++|.++++.+.. .+..++||+||+| +|++|.++.++
T Consensus 157 ~~~~~~~~~~~~~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~G-~E~~v~vl~~~ 229 (364)
T 2i87_A 157 KYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQ------FDRKLVIEQGVNA-REIEVAVLGND 229 (364)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHT------TCSEEEEEECCCC-EEEEEEEEESS
T ss_pred ccchhHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCccC-eEEEEEEEcCC
Confidence 46677788999999999999999999999999999999887643 2578999999999 99999999986
Q ss_pred CCCEEEEeeeee--eecccccee-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEe
Q 009316 287 YGNVVHFGERDC--SIQRRNQKL-----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMN 359 (537)
Q Consensus 287 ~G~vv~~~~r~~--s~~~~~~k~-----~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN 359 (537)
++.++..++..+ .+.....+. ....|+. ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||
T Consensus 230 ~~~~~~~~e~~~~~~~~~~~~k~~~g~~~~~~pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~viEiN 308 (364)
T 2i87_A 230 YPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPAD-LDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETN 308 (364)
T ss_dssp SCEECCCEEECCSCCC-----------CCEESSCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEE
T ss_pred CcEEeeeEEEecCCCcCCHHHcccCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEecCCCEEEEEEe
Confidence 544444444332 122222222 2346776 89999999999999999999999999999999988999999999
Q ss_pred ccCCCcc----cchhhhcCCCHHHHHHH
Q 009316 360 TRIQVEH----PVTEMISSVDLIEEQIH 383 (537)
Q Consensus 360 ~R~~g~~----~~~e~~tGidl~~~~i~ 383 (537)
||+++.. |....++|+|+.++..+
T Consensus 309 ~rpg~t~~s~~p~~~~~~G~~~~~l~~~ 336 (364)
T 2i87_A 309 AMPGFTAFSMYPKLWENMGLSYPELITK 336 (364)
T ss_dssp SSCCCSTTSHHHHHHHHTTCCHHHHHHH
T ss_pred CCCCCCchhHHHHHHHHhCCCHHHHHHH
Confidence 9998752 33345689998665433
No 45
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=100.00 E-value=1.7e-34 Score=301.84 Aligned_cols=298 Identities=18% Similarity=0.246 Sum_probs=213.6
Q ss_pred CEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCchh-hccCEEE---EcCCCCCCC--CCCCHHHHH
Q 009316 72 EKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESV---CIGEAPSSQ--SYLLIPNVL 136 (537)
Q Consensus 72 ~~iLI~~~g~---------ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~ad~~~---~i~~~~~~~--sy~~~~~i~ 136 (537)
+||+|+-+|. .|..|++++++.||+++.++.+.+..-... ...+... .+....... -..+...++
T Consensus 38 ~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (383)
T 3k3p_A 38 ETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQPSETDKLMTNDTIIASQKIKPSDIY 117 (383)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEEEEESSCCC--CCCCCTTSCCGGGEECGGGGC
T ss_pred CeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEecCCCCEEecccccccccccccccccccccccccccccccc
Confidence 4677776544 378899999999999999976543211000 0000000 000000000 000000010
Q ss_pred HHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcC-CCCCCCCCcCCCCH----
Q 009316 137 SAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAG-VPTVPGSDGLLQST---- 210 (537)
Q Consensus 137 ~~a~~~~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~G-vpvp~~~~~~v~~~---- 210 (537)
.++|+|+|. .|...|+..++.+++.+|++++|+++.+...+.||..+|++++++| ||+|++ ..+.+.
T Consensus 118 -----~~~D~vf~~lhG~~GEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp~~--~~~~~~~~~~ 190 (383)
T 3k3p_A 118 -----EEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAY--VALIEGEPLE 190 (383)
T ss_dssp -----CTTCEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBCCE--EEEETTSCHH
T ss_pred -----cCCCEEEEcCCCCCcchHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCCCE--EEEeCccchh
Confidence 369999997 4667799999999999999999999999999999999999999999 999998 444443
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCE
Q 009316 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (537)
Q Consensus 211 ~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~v 290 (537)
+++.++.+++|||+||||..|++|.|+.+|++.+|+.++++.+... +..++||+||+| +|++|.++.|+...+
T Consensus 191 ~~~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~~------~~~vlVEe~I~G-~E~~v~vl~d~~~~~ 263 (383)
T 3k3p_A 191 SKLAEVEEKLIYPVFVKPANMGSSVGISKAENRTDLKQAIALALKY------DSRVLIEQGVDA-REIEVGILGNTDVKT 263 (383)
T ss_dssp HHHHHHHHHCCSSEEEEECC------CEEESSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEEESSSCEE
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhC------CCeEEEEcCCCC-eEEEEEEEeCCCeeE
Confidence 5677888899999999999999999999999999999999887653 478999999998 999999998755433
Q ss_pred EEEeeee--eeeccccc-----eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCC
Q 009316 291 VHFGERD--CSIQRRNQ-----KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQ 363 (537)
Q Consensus 291 v~~~~r~--~s~~~~~~-----k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~ 363 (537)
....+.. +.+..... .....+|++ ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||||++
T Consensus 264 ~~~~ei~~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~~g~~~vlEINtrPG 342 (383)
T 3k3p_A 264 TLPGEIVKDVAFYDYEAKYIDNKITMAIPAE-IDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTEDGKVYLNELNTMPG 342 (383)
T ss_dssp CCCEEEC-----------------CEESSCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCC
T ss_pred EeeEEEecCCCccchhhcccCCCeeEEecCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEECCCCEEEEEeeCCCC
Confidence 3333321 11222222 234567887 999999999999999999999999999999999889999999999997
Q ss_pred Cc----ccchhhhcCCCHHHHHHHH
Q 009316 364 VE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 364 g~----~~~~e~~tGidl~~~~i~~ 384 (537)
.+ .|.....+|+|+.++..++
T Consensus 343 ~t~~S~~p~~~~a~Gi~~~~li~~l 367 (383)
T 3k3p_A 343 FTQWSMYPLLWENMGLSYSVLIEEL 367 (383)
T ss_dssp CC--CHHHHHHHHTTCCHHHHHHHH
T ss_pred CCcccHHHHHHHHhCCCHHHHHHHH
Confidence 44 3445566899987765444
No 46
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=100.00 E-value=6.5e-34 Score=287.96 Aligned_cols=274 Identities=20% Similarity=0.290 Sum_probs=217.2
Q ss_pred CCCEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009316 70 RQEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 70 ~~~~iLI~~~g~---------ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~ 140 (537)
|.+||+|++.|. .+..++++++++|+++++++.+ +.. ... +.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~-~~~--~~~--------------------------~~ 51 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK-EVD--VTQ--------------------------LK 51 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT-TSC--GGG--------------------------TT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC-chH--HHH--------------------------hh
Confidence 457899999886 6789999999999999999644 211 100 01
Q ss_pred HcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHH----
Q 009316 141 SRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK---- 215 (537)
Q Consensus 141 ~~~~d~V~pg~-g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~---- 215 (537)
..++|+|++.. +...|+..++..++..|++++||+++++..+.||..++++++++|||+|++ ..+.+. ++.+
T Consensus 52 ~~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gi~~p~~--~~~~~~-~~~~~~~~ 128 (306)
T 1iow_A 52 SMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPW--VALTRA-EFEKGLSD 128 (306)
T ss_dssp TTTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCE--EEEEHH-HHHHCCCT
T ss_pred ccCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCe--EEEchh-hhhccchh
Confidence 24678888763 333477677888999999999999999999999999999999999999998 556666 6666
Q ss_pred ----HHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEE
Q 009316 216 ----LADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVV 291 (537)
Q Consensus 216 ----~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv 291 (537)
++++++||+||||..|+||+|++++++.+++.++++.+.. + +..+++|+||+| +|++|.++ + |+++
T Consensus 129 ~~~~~~~~~~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~-----~-~~~~lvee~i~g-~e~~v~~~-~--g~~~ 198 (306)
T 1iow_A 129 KQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQ-----H-DEEVLIEKWLSG-PEFTVAIL-G--EEIL 198 (306)
T ss_dssp HHHHHHHTTCSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTT-----T-CSEEEEEECCCC-CEEEEEEE-T--TEEC
T ss_pred hhhhHHhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh-----h-CCCEEEEeCcCC-EEEEEEEE-C--CCcc
Confidence 7788999999999999999999999999999998876532 1 478999999998 99999998 2 3444
Q ss_pred EEeeeee-----eeccc--cceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCC
Q 009316 292 HFGERDC-----SIQRR--NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV 364 (537)
Q Consensus 292 ~~~~r~~-----s~~~~--~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g 364 (537)
...+... .+... ........|+. ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||+|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~~iEiN~rpg~ 277 (306)
T 1iow_A 199 PSIRIQPSGTFYDYEAKFLSDETQYFCPAG-LEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGM 277 (306)
T ss_dssp CCEEEECSSSSSCHHHHHTCSCCEEESSCC-CCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTSCEEEEEEESSCCC
T ss_pred ceEEEEeCCCeEchhheecCCCeeEEcCCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEcCCCCEEEEEecCCCCC
Confidence 3332210 00000 11344567876 8999999999999999999999999999999998899999999999977
Q ss_pred cc----cchhhhcCCCHHHHHHHHHc
Q 009316 365 EH----PVTEMISSVDLIEEQIHVAM 386 (537)
Q Consensus 365 ~~----~~~e~~tGidl~~~~i~~a~ 386 (537)
.. |.....+|+|+.+.++++..
T Consensus 278 ~~~s~~p~~~~~~G~~~~~~~~~~~~ 303 (306)
T 1iow_A 278 TSHSLVPMAARQAGMSFSQLVVRILE 303 (306)
T ss_dssp STTCHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHcCCCHHHHHHHHHH
Confidence 52 33456789999999988753
No 47
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=100.00 E-value=2.5e-33 Score=291.98 Aligned_cols=300 Identities=16% Similarity=0.191 Sum_probs=214.8
Q ss_pred CEEEEEcCcHH---------HHHHHHHHHHcCCcEEEEecCCCCCCchh-------------h-cc--CEEEEcCCCCCC
Q 009316 72 EKILVANRGEI---------AVRVIRTAHEMGIPCVAVYSTIDKDALHV-------------K-LA--DESVCIGEAPSS 126 (537)
Q Consensus 72 ~~iLI~~~g~i---------a~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-------------~-~a--d~~~~i~~~~~~ 126 (537)
+||.|+-+|.. |..+++++++.||+++.++.+.+..-... . .. +..+.+.+....
T Consensus 5 ~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 84 (372)
T 3tqt_A 5 LHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISVIFIDHVGRWYLIDQPEMFLAHSPDHLVKEGSARPITIAFGDAA 84 (372)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECCHHHHHHSCHHHHHHHTCSEEEEECTTCSS
T ss_pred CEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEEEEEECCCCCEEeccchhhhhccccccccccccccceeecccccc
Confidence 46666655432 77889999999999999976554211100 0 00 111212110000
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCc
Q 009316 127 QSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG 205 (537)
Q Consensus 127 ~sy~~~~~i~~~a~~~~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~ 205 (537)
....... ......++|+|+|. +|...|+..++..++.+|++++|+++.++..+.||..+|++++++|||+|++ .
T Consensus 85 ~~~~~~~---~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~--~ 159 (372)
T 3tqt_A 85 KPWQSLN---GDGRRYSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDW--H 159 (372)
T ss_dssp CCEEEC-------CEECCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCC--E
T ss_pred cceeecc---ccccccCCCEEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCE--E
Confidence 0000000 00001579999998 5778899999999999999999999999999999999999999999999998 4
Q ss_pred CCCCHHH----HHHHHHhcCCc-EEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEE
Q 009316 206 LLQSTEE----AVKLADELGFP-VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEF 280 (537)
Q Consensus 206 ~v~~~~~----~~~~~~~ig~P-vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v 280 (537)
.+.+.++ +.++.+++||| +||||..|++|+||.+|++.+||.++++.+... +..++||+||+| +|++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~lg~P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~~------~~~vlVEe~I~G-~E~~v 232 (372)
T 3tqt_A 160 TLSPRDATEGVYQRLLDRWGTSELFVKAVSLGSSVATLPVKTETEFTKAVKEVFRY------DDRLMVEPRIRG-REIEC 232 (372)
T ss_dssp EECTTSCCTTHHHHHHHHC---CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTTT------CSCEEEEECCCS-EEEEE
T ss_pred EEechhhhhhHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhc------CCCEEEECCCCC-EEEEE
Confidence 5554442 45677889999 999999999999999999999999998876432 578999999998 99999
Q ss_pred EEEEeCCCCEEEEeeee-----eeeccccc--e-eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCC
Q 009316 281 QVLADKYGNVVHFGERD-----CSIQRRNQ--K-LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGS 352 (537)
Q Consensus 281 ~v~~d~~G~vv~~~~r~-----~s~~~~~~--k-~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~ 352 (537)
.++.++...+...++.. +.+...+. . .....|+. ++++..+++.+.+.++++++|+.|++++||+++++|+
T Consensus 233 ~vl~~~~~~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~~dg~ 311 (372)
T 3tqt_A 233 AVLGNGAPKASLPGEIIPHHDYYSYDAKYLDPNGATTTTSVD-LSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTPNNK 311 (372)
T ss_dssp EEEESSSCEECCCEEEECC---------------CEEESCCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCC
T ss_pred EEEeCCCceEeeeEEEecCCCccchhhcccCCCceEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEeCCCc
Confidence 99987632222222211 11111111 1 44567887 9999999999999999999999999999999998899
Q ss_pred eEEEEEeccCCCc----ccchhhhcCCCHHHHHHHH
Q 009316 353 FYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 353 ~~~lEiN~R~~g~----~~~~e~~tGidl~~~~i~~ 384 (537)
+||+|||||++.+ .|....++|+|+.++..++
T Consensus 312 ~~vlEINt~PG~t~~S~~p~~~~~~G~~~~~li~~l 347 (372)
T 3tqt_A 312 VLVNEINTIPGFTNISMYPKMWEASGLPCPNLLDQL 347 (372)
T ss_dssp EEEEEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEEEECCCCcCccCHHHHHHHHhCCCHHHHHHHH
Confidence 9999999999754 3445567899987765443
No 48
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=100.00 E-value=2e-33 Score=285.08 Aligned_cols=271 Identities=20% Similarity=0.262 Sum_probs=208.3
Q ss_pred CEEEEEcCc---------HHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009316 72 EKILVANRG---------EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 72 ~~iLI~~~g---------~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~ 142 (537)
+||+|+.+| ..+..+++++++.|++++.++.+.... + +.+..
T Consensus 4 m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~---------------------------~--~~~~~ 54 (307)
T 3r5x_A 4 MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMD---------------------------L--IEKAK 54 (307)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGG---------------------------H--HHHTT
T ss_pred cEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchh---------------------------H--HHhcc
Confidence 578887766 347889999999999999986421100 0 11225
Q ss_pred CCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHH-HHHhc
Q 009316 143 GCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK-LADEL 220 (537)
Q Consensus 143 ~~d~V~pg~-g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~-~~~~i 220 (537)
++|+|+|.. |...|+..++..++..|++++||+++++..+.||..++++++++|||+|++ ..+.+.+++.+ +++.+
T Consensus 55 ~~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~~ 132 (307)
T 3r5x_A 55 DIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDW--IELTKMEDLNFDELDKL 132 (307)
T ss_dssp TCSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEESSSCCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEeChhhhhHHHHHhc
Confidence 799999984 334477778889999999999999999999999999999999999999998 55666555443 67789
Q ss_pred CCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEeeeeeee
Q 009316 221 GFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSI 300 (537)
Q Consensus 221 g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~~r~~s~ 300 (537)
+||+||||..|+||+|+.++++.+++.++++.+... +..+++|+||+| +|++|.++. |+++.+.+.....
T Consensus 133 ~~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~G-~e~~v~v~~---g~~~~~~~~~~~~ 202 (307)
T 3r5x_A 133 GFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEW------DSEVVIEKYIKG-EEITCSIFD---GKQLPIISIRHAA 202 (307)
T ss_dssp CSSEEEEECC----CCCEEECSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEET---TEECCCEEEEEEE
T ss_pred CCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEECCcCC-EEEEEEEEC---CEEeeEEEEEcCC
Confidence 999999999999999999999999999999887653 479999999999 999999862 3443333322221
Q ss_pred c--ccccee----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCc----ccchh
Q 009316 301 Q--RRNQKL----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVE----HPVTE 370 (537)
Q Consensus 301 ~--~~~~k~----~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~----~~~~e 370 (537)
+ ....+. ....|++ ++++..+++.+.+.++++++|+.|++++||+++ +|++||+|||+|++.. .|...
T Consensus 203 ~~~~~~~~~~~~g~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~-~g~~~vlEiN~rpg~~~~s~~~~~~ 280 (307)
T 3r5x_A 203 EFFDYNAKYDDASTIEEVIE-LPAELKERVNKASLACYKALKCSVYARVDMMVK-DGIPYVMEVNTLPGMTQASLLPKSA 280 (307)
T ss_dssp EEETTEEEEEEEEEEEEECC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEE-TTEEEEEEEESSCCCSTTSHHHHHH
T ss_pred cccChhhcCCCCCCeEecCC-CCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEE-CCeEEEEEEcCCCCCCccCHHHHHH
Confidence 1 222222 2233765 899999999999999999999999999999999 5779999999999754 23446
Q ss_pred hhcCCCHHHHHHHHH
Q 009316 371 MISSVDLIEEQIHVA 385 (537)
Q Consensus 371 ~~tGidl~~~~i~~a 385 (537)
..+|+|+.+...++.
T Consensus 281 ~~~G~~~~~li~~ll 295 (307)
T 3r5x_A 281 DAAGIHYSKLLDMII 295 (307)
T ss_dssp HHTTCCHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHH
Confidence 678999987665543
No 49
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=100.00 E-value=8.2e-34 Score=292.93 Aligned_cols=297 Identities=18% Similarity=0.208 Sum_probs=220.8
Q ss_pred CCEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCchh-----hcc--C-EEEEcCCCCCCCCCCCHH
Q 009316 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KLA--D-ESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 71 ~~~iLI~~~g~---------ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-----~~a--d-~~~~i~~~~~~~sy~~~~ 133 (537)
.+||+|+.+|. .+..+++++++.|++++.++.+.+...... .+. + ..+.+.+.+....
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 77 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCYSAVLSPDKKMHG----- 77 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCCCTTCCCTTCEEEEECSCTTTCE-----
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcCCCCEEecccchhhcccccccceeccccccccc-----
Confidence 45788887663 378899999999999999976554321100 011 0 1222322111000
Q ss_pred HH-HHH--HHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCC
Q 009316 134 NV-LSA--AISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQS 209 (537)
Q Consensus 134 ~i-~~~--a~~~~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~ 209 (537)
.+ +.. .+..++|+|+|. .|...|+..++..++.+|++++|++++++..+.||..++++|+++|||+|++ ..+.+
T Consensus 78 ~~~~~~~~~~~~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~ 155 (343)
T 1e4e_A 78 LLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAF--WVINK 155 (343)
T ss_dssp EEEEETTEEEEEECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCE--EEECT
T ss_pred ceeecccccccccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCE--EEEec
Confidence 01 000 123579999998 4566688788999999999999999999999999999999999999999998 55555
Q ss_pred HHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCC
Q 009316 210 TEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGN 289 (537)
Q Consensus 210 ~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~ 289 (537)
.+++. .++++||+||||..|+||+||.+|++.+|+.++++.+.. .+..+++|+||+| +|++|.++.++.+
T Consensus 156 ~~~~~--~~~~~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~G-~E~~v~vl~~~~~- 225 (343)
T 1e4e_A 156 DDRPV--AATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQ------YDSKILIEQAVSG-CEVGCAVLGNSAA- 225 (343)
T ss_dssp TCCCC--GGGSCSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTT------TCSSEEEEECCCS-EEEEEEEEEETTC-
T ss_pred hhhhh--hhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh------cCCcEEEEeCcCC-eEEEEEEEeCCCC-
Confidence 54432 267899999999999999999999999999999887543 2478999999999 9999999998654
Q ss_pred EEEE--eeeeee--eccc---------cceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEE
Q 009316 290 VVHF--GERDCS--IQRR---------NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFM 356 (537)
Q Consensus 290 vv~~--~~r~~s--~~~~---------~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~l 356 (537)
+..+ .+.... +... ........|+. ++++..+++.+.+.++++++|+.|++++||+++++|++||+
T Consensus 226 ~~~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~vi 304 (343)
T 1e4e_A 226 LVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPAD-LSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVLN 304 (343)
T ss_dssp CEECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSCS-SCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTCCEEEE
T ss_pred eEEeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEeCCCCEEEE
Confidence 3322 222210 1111 11233457776 89999999999999999999999999999999988999999
Q ss_pred EEeccCCCcc----cchhhhcCCCHHHHHHHHH
Q 009316 357 EMNTRIQVEH----PVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 357 EiN~R~~g~~----~~~e~~tGidl~~~~i~~a 385 (537)
|||+|++++. |.....+|+|+.++..++.
T Consensus 305 EiN~rpg~t~~s~~p~~~~~~G~~~~~l~~~li 337 (343)
T 1e4e_A 305 EVNTLPGFTSYSRYPRMMAAAGISLPELIDRLI 337 (343)
T ss_dssp EEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred EeeCCCCCCcccHHHHHHHHhCCCHHHHHHHHH
Confidence 9999998752 4445567999988776654
No 50
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-33 Score=293.82 Aligned_cols=234 Identities=21% Similarity=0.321 Sum_probs=192.3
Q ss_pred CCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHH--HHHHHHh
Q 009316 143 GCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEE--AVKLADE 219 (537)
Q Consensus 143 ~~d~V~pg~-g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~--~~~~~~~ 219 (537)
++|+|+|.. |...|+..++.+++.+|++++|++++++..+.||..+|++|+++|||+|++ ..+.+.++ ..+..++
T Consensus 109 ~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~k~~l~~~GIp~p~~--~~~~~~~~~~~~~~~~~ 186 (373)
T 3lwb_A 109 SVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAY--AVLRPPRSTLHRQECER 186 (373)
T ss_dssp TCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHHHHHHHHTTCCBCCE--EEECTTCCCCCHHHHHH
T ss_pred CccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHHHHHHHHcCcCCCCE--EEEECcccchhHHHHHh
Confidence 699999995 888899999999999999999999999999999999999999999999998 45554443 1334678
Q ss_pred cCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCC--CEEEEeeee
Q 009316 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYG--NVVHFGERD 297 (537)
Q Consensus 220 ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G--~vv~~~~r~ 297 (537)
+|||+||||..|++|.|+.+|++.+||.++++.+... +..++||+||+| +|++|.++.++.+ .+...++..
T Consensus 187 lg~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~~------~~~vlVEe~I~G-~E~~v~vl~~~~~~~~~~~~~ei~ 259 (373)
T 3lwb_A 187 LGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRH------DPKVIVEAAISG-RELECGVLEMPDGTLEASTLGEIR 259 (373)
T ss_dssp HCSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHTT------CSSEEEEECCEE-EEEEEEEEECTTSCEEECCCEEEE
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEeCCCCC-eEEEEEEEECCCCceEEeeeeEEE
Confidence 9999999999999999999999999999999877542 578999999998 9999999998776 333444443
Q ss_pred ee--------eccccce-----eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCC
Q 009316 298 CS--------IQRRNQK-----LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV 364 (537)
Q Consensus 298 ~s--------~~~~~~k-----~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g 364 (537)
+. +.+...| .....|+. ++++..+++.+.+.++++++|+.|++++||+++++|+ ||+|||||++.
T Consensus 260 ~~~~~~~~~~~~d~~~ky~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~dg~-~vlEIN~~PG~ 337 (373)
T 3lwb_A 260 VAGVRGREDSFYDFATKYLDDAAELDVPAK-VDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTDDGP-VINEINTMPGF 337 (373)
T ss_dssp CCSTTCSEESSSCHHHHHTCTTCEEESSCC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEETTEE-EEEEEESSCCC
T ss_pred ccCCCCccccccchhhcccCCCceEEeCCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEECCCC-EEEEecCCCCC
Confidence 32 2222111 23456887 9999999999999999999999999999999998897 99999999975
Q ss_pred c----ccchhhhcCCCHHHH---HHHHHcC
Q 009316 365 E----HPVTEMISSVDLIEE---QIHVAMG 387 (537)
Q Consensus 365 ~----~~~~e~~tGidl~~~---~i~~a~G 387 (537)
. .|....++|+|+.++ +++.++.
T Consensus 338 t~~S~~p~~~~a~Gi~~~~li~~li~~a~~ 367 (373)
T 3lwb_A 338 TTISMYPRMWAASGVDYPTLLATMIETTLA 367 (373)
T ss_dssp STTSHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 4 233446799997554 4555553
No 51
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=100.00 E-value=1.6e-33 Score=291.18 Aligned_cols=299 Identities=18% Similarity=0.181 Sum_probs=216.5
Q ss_pred CEEEEEcCcH---------HHHHHHHHHHHcCCcEEEEecCCCCCCchh-----hcc-C--EEEEcCCCCCCCCCCCHHH
Q 009316 72 EKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KLA-D--ESVCIGEAPSSQSYLLIPN 134 (537)
Q Consensus 72 ~~iLI~~~g~---------ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-----~~a-d--~~~~i~~~~~~~sy~~~~~ 134 (537)
+||.|+-+|. .|..|++++++.||+++.++.+.+...... .+. + ..-.+.+.....+......
T Consensus 4 ~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (346)
T 3se7_A 4 MKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSPDRSVHGLLVLEQ 83 (346)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCSSSSSSSSCCEEEEECCCTTTCEEEEEET
T ss_pred CEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEECCCCCEEeccchhhhhcccccccceeccCccCccceeccc
Confidence 4566555443 378899999999999999976544211000 000 0 0000100000000000000
Q ss_pred HHHHHHHcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHH
Q 009316 135 VLSAAISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA 213 (537)
Q Consensus 135 i~~~a~~~~~d~V~pg~-g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~ 213 (537)
...++.++|+|+|.. |...|+..++.+++.+|++++|++++++..+.||..++++++++|||+|++ ..+.+.+
T Consensus 84 --~~~~~~~~D~v~~~lhG~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~-- 157 (346)
T 3se7_A 84 --GKYETIRLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNF--WTVTADE-- 157 (346)
T ss_dssp --TEEEEEECSEEEECCCSTTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCE--EEEETTS--
T ss_pred --ccccccCCCEEEEccCCCCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCE--EEEcCcH--
Confidence 001245799999994 888899999999999999999999999999999999999999999999998 4555443
Q ss_pred HHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCC-EEE
Q 009316 214 VKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGN-VVH 292 (537)
Q Consensus 214 ~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~-vv~ 292 (537)
..+.++++||+||||..|++|+|+.++++.+|+.++++.+... +..++||+||+| +|++|.++.++.+. +..
T Consensus 158 ~~~~~~lg~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~vlvEe~I~G-~E~~v~vl~~~~~~~~~~ 230 (346)
T 3se7_A 158 KIPTDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREY------DSKVLIEEAVIG-TEIGCAVMGNGPELITGE 230 (346)
T ss_dssp CCCTTTCCSSEEEEESSCCTTTTCEEECSHHHHHHHHHHHTTT------CSEEEEEECCCS-EEEEEEEEEETTEEEECC
T ss_pred HHHHHhcCCCEEEEeCCCCCCcCEEEECCHHHHHHHHHHHHhC------CCcEEEEeCcCC-EEEEEEEEecCCCeEEEe
Confidence 3346689999999999999999999999999999999876432 578999999998 99999999986532 222
Q ss_pred Eeeeeee------eccccce-----eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEecc
Q 009316 293 FGERDCS------IQRRNQK-----LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTR 361 (537)
Q Consensus 293 ~~~r~~s------~~~~~~k-----~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R 361 (537)
..+..+. .|++..+ .....|++ ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||+|
T Consensus 231 ~~e~~~~~~~~d~~q~~~~ky~~~~~~~~~pa~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~r 309 (346)
T 3se7_A 231 VDQITLSHGFFKIHQESTPESGSDNSAVTVPAD-ISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTEDGKVVLNEVNTF 309 (346)
T ss_dssp CEEECCC--------------CGGGSCEESSCC-CCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTTSCEEEEEEESS
T ss_pred eEEEecCCCCcCcccchhccccCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEeCCCCEEEEEEeCC
Confidence 2222211 0111111 23456876 9999999999999999999999999999999998899999999999
Q ss_pred CCCc----ccchhhhcCCCHHHHHHHH
Q 009316 362 IQVE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 362 ~~g~----~~~~e~~tGidl~~~~i~~ 384 (537)
++.. .|.....+|+|+.+...++
T Consensus 310 PG~t~~s~~p~~~~~~G~~~~~l~~~l 336 (346)
T 3se7_A 310 PGMTSYSRYPRMMTAAGLSRADVIDRL 336 (346)
T ss_dssp CCCSTTCHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 9754 2334457999998866554
No 52
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=100.00 E-value=7e-33 Score=283.57 Aligned_cols=290 Identities=21% Similarity=0.279 Sum_probs=215.9
Q ss_pred CCCEEEEEcCcHH---------HHHHHHHHHHcCCcEEEEecCCCCCCch-----hhccCEEEEcCCCCCCCCCCCHHHH
Q 009316 70 RQEKILVANRGEI---------AVRVIRTAHEMGIPCVAVYSTIDKDALH-----VKLADESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 70 ~~~~iLI~~~g~i---------a~~ii~aa~~~Gi~~v~v~~~~d~~~~~-----~~~ad~~~~i~~~~~~~sy~~~~~i 135 (537)
|.+||+|+.+|.. +..+++++++ +++.++-+.+..... ..+++....+.-.+.... +
T Consensus 2 ~~~~v~vl~gg~s~E~~vSl~s~~~v~~al~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 72 (322)
T 2fb9_A 2 EFMRVLLIAGGVSPEHEVSLLSAEGVLRHIPF---PTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPFPPP------L 72 (322)
T ss_dssp CCCCEEEEEECSSTTHHHHHHHHHHHHHHCSS---CEEEEEECTTSCEECHHHHHHHTTSSCCCCCCBCSSCC------C
T ss_pred CCcEEEEEeCCCchhHHHHHHHHHHHHHHhcc---CeEEEEEcCCCCEEecccchhhhccccccceecccccc------c
Confidence 3457888875432 5778888877 777776444322110 122221100100000000 1
Q ss_pred HHHHHHcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHH
Q 009316 136 LSAAISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAV 214 (537)
Q Consensus 136 ~~~a~~~~~d~V~pg~-g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~ 214 (537)
+..++|+|+|.. |...|+..++..++..|++++|++++++..+.||..++++|+++|||+|++ ..+.+.++
T Consensus 73 ----~~~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~-- 144 (322)
T 2fb9_A 73 ----SWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPW--VAVRKGEP-- 144 (322)
T ss_dssp ----CCTTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEETTSC--
T ss_pred ----cccCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEECchh--
Confidence 146799999996 888899889999999999999999999999999999999999999999998 44444433
Q ss_pred HHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCEEEEe
Q 009316 215 KLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFG 294 (537)
Q Consensus 215 ~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~vv~~~ 294 (537)
+.. ++|||+||||..|++|+|+.++++.+|+.++++.+.. .+..+++|+||+|.+|+++.++.++.++++..+
T Consensus 145 ~~~-~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~G~~E~~v~vl~~~~~~~~~~~ 217 (322)
T 2fb9_A 145 PVV-PFDPPFFVKPANTGSSVGISRVERFQDLEAALALAFR------YDEKAVVEKALSPVRELEVGVLGNVFGEASPVG 217 (322)
T ss_dssp CCC-CSCSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCSSCEEEEEEEESSSSCEEEEEE
T ss_pred hhh-ccCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCCCCCeeEEEEEEeCCCceEeeeE
Confidence 122 7899999999999999999999999999999887643 247899999999978999999987665566665
Q ss_pred eeee--eecccccee-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcc-
Q 009316 295 ERDC--SIQRRNQKL-----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEH- 366 (537)
Q Consensus 295 ~r~~--s~~~~~~k~-----~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~- 366 (537)
+... ...+...+. ....|+. ++++..+++.+.+.++++++|+.|++++||+++ +|++||+|||+|+++..
T Consensus 218 ei~~~~~~~~~~~k~~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~-~g~~~vlEiN~rpg~t~~ 295 (322)
T 2fb9_A 218 EVRYEAPFYDYETKYTPGRAELLIPAP-LDPGTQETVQELALKAYKVLGVRGMARVDFFLA-EGELYLNELNTIPGFTPT 295 (322)
T ss_dssp EEEEECCEEETTTEEECCEEEEESSCC-CCTTHHHHHHHHHHHHHHHHTCCSEEEEEEEEE-TTEEEEEEEESSCCCSSS
T ss_pred EEeeCCCccCHHHcccCCCeEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEE-CCcEEEEEEECCCCCCcc
Confidence 5432 222322222 3357886 899999999999999999999999999999999 88899999999998752
Q ss_pred ---cchhhhcCCCHHHHHHHHH
Q 009316 367 ---PVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 367 ---~~~e~~tGidl~~~~i~~a 385 (537)
|.....+|+|+.+...++.
T Consensus 296 s~~p~~~~~~G~~~~~l~~~li 317 (322)
T 2fb9_A 296 SMYPRLFEAGGVAYPELLRRLV 317 (322)
T ss_dssp CHHHHHHHHTTCCHHHHHHHHH
T ss_pred cHHHHHHHHhCCCHHHHHHHHH
Confidence 2334568999887765543
No 53
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.98 E-value=3.2e-31 Score=264.44 Aligned_cols=272 Identities=21% Similarity=0.313 Sum_probs=200.8
Q ss_pred EEEEcC--cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC-EEEeC
Q 009316 74 ILVANR--GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT-MLHPG 150 (537)
Q Consensus 74 iLI~~~--g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d-~V~pg 150 (537)
|+|++. +..+..++++++++|+++++++.+.+. ..++|. + ....++| ++++.
T Consensus 2 I~il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~~----~~~~~~------------~---------~~~~~~d~~~~~~ 56 (280)
T 1uc8_A 2 LAILYDRIRPDERMLFERAEALGLPYKKVYVPALP----MVLGER------------P---------KELEGVTVALERC 56 (280)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCC----EETTBC------------C---------GGGTTCCEEEECC
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCcEEEEehhhce----eeccCC------------C---------cccCCCCEEEECC
Confidence 777774 667889999999999999999755432 112211 1 1124689 88887
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecC
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~ 230 (537)
++. .++..+++.++..|+++++ +++++..+.||..++++|+++|||+|++ ..+.+.+++.+++++++||+|+||..
T Consensus 57 ~~~-~~~~~~~~~l~~~g~~~~~-~~~~~~~~~dK~~~~~~l~~~gi~~p~~--~~~~~~~~~~~~~~~~~~p~vvKp~~ 132 (280)
T 1uc8_A 57 VSQ-SRGLAAARYLTALGIPVVN-RPEVIEACGDKWATSVALAKAGLPQPKT--ALATDREEALRLMEAFGYPVVLKPVI 132 (280)
T ss_dssp SSH-HHHHHHHHHHHHTTCCEES-CHHHHHHHHBHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSEEEECSB
T ss_pred ccc-hhhHHHHHHHHHCCCceeC-CHHHHHHhCCHHHHHHHHHHcCcCCCCe--EeeCCHHHHHHHHHHhCCCEEEEECC
Confidence 763 2667788899999999985 6999999999999999999999999998 67889999999999999999999999
Q ss_pred CCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccC-CcEEEEEEEEeCCCCEEEEeeeeee-eccccceeE
Q 009316 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-PRHIEFQVLADKYGNVVHFGERDCS-IQRRNQKLL 308 (537)
Q Consensus 231 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g-~~ei~v~v~~d~~G~vv~~~~r~~s-~~~~~~k~~ 308 (537)
|+||+|++++++.+++.++++.+.. ...+.+..+++|+||+| ..|+++.++ .|+++....+... +......-.
T Consensus 133 g~~~~gv~~v~~~~el~~~~~~~~~--~~~~~~~~~lvqe~i~~~~~e~~v~v~---~~~~~~~~~~~~~~~~~~~~~g~ 207 (280)
T 1uc8_A 133 GSWGRLLAXXXXXXXXXXXXXXKEV--LGGFQHQLFYIQEYVEKPGRDIRVFVV---GERAIAAIYRRSAHWITNTARGG 207 (280)
T ss_dssp CCBCSHHHHHHHHHC--------------CTTTTCEEEEECCCCSSCCEEEEEE---TTEEEEEEEC-------------
T ss_pred CCCcccceecccccccchhhhhHhh--hcccCCCcEEEEeccCCCCceEEEEEE---CCEEEEEEEEecCCccccccCCc
Confidence 9999999999999999988876521 11123578999999997 578888776 2355443332100 100000011
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCC
Q 009316 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~ 388 (537)
...|.. +++ ++.+.+.++++++|+ |.+++||+++++| +||+|||+|+++.. ++..+|+|+.+++++.++|+
T Consensus 208 ~~~p~~-l~~----~~~~~~~~~~~~lg~-g~~~vD~~~~~~g-~~~iEiN~r~g~~~--~~~~~G~~~~~~~~~~~~~~ 278 (280)
T 1uc8_A 208 QAENCP-LTE----EVARLSVKAAEAVGG-GVVAVDLFESERG-LLVNEVNHTMEFKN--SVHTTGVDIPGEILKYAWSL 278 (280)
T ss_dssp -CEECC-CCH----HHHHHHHHHHHHTTC-SEEEEEEEEETTE-EEEEEEETTCCCTT--HHHHHCCCHHHHHHHHHHHT
T ss_pred cccCCC-CCH----HHHHHHHHHHHHhCC-CeEEEEEEEeCCC-eEEEEEeCCCCccc--hheeeccCHHHHHHHHHHhh
Confidence 123443 444 788999999999999 9999999999887 99999999996654 67889999999999998875
No 54
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=99.97 E-value=2.1e-31 Score=277.15 Aligned_cols=230 Identities=16% Similarity=0.171 Sum_probs=183.8
Q ss_pred CCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHH--HHHHHHHh
Q 009316 143 GCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE--EAVKLADE 219 (537)
Q Consensus 143 ~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~--~~~~~~~~ 219 (537)
++|+|+|. .|...|+..++..++.+|++++|++++++..+.||..++++|+++|||+|++ ..+.+.+ ++.+ +++
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~-~~~ 183 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDY--VLLNEKNRANALD-LMN 183 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCC--EEECTTTGGGHHH-HCC
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCE--EEEeCCchHHHHH-Hhc
Confidence 68999998 5677788889999999999999999999999999999999999999999998 5566555 5666 778
Q ss_pred cCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEE-EEEEEeCCCCEEEEeeeee
Q 009316 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIE-FQVLADKYGNVVHFGERDC 298 (537)
Q Consensus 220 ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~-v~v~~d~~G~vv~~~~r~~ 298 (537)
+|||+||||..|++|.|+.+|++.+||.++++.+... +..++||+||+|.+|++ +.+.. +|+++.... +.
T Consensus 184 lg~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~~------~~~vlVEe~I~G~~E~svi~v~v--~g~~~~~~~-ei 254 (367)
T 2pvp_A 184 FNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEY------SKEVLIEPFIQGVKEYNLAGCKI--KKDFCFSYI-EE 254 (367)
T ss_dssp SCSCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTTT------CSCEEEEECCTTCEEEEEEEEEE--TTEEEEEEE-EE
T ss_pred cCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhc------CCcEEEEeCCCCCceeeEEEEEE--CCEEEEEEE-EE
Confidence 9999999999999999999999999999998876431 57899999999878955 33433 455444432 21
Q ss_pred e----ecccccee-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccch
Q 009316 299 S----IQRRNQKL-----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVT 369 (537)
Q Consensus 299 s----~~~~~~k~-----~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~ 369 (537)
. +.....+. ....|+. ++++..+++.+.+.++++++|+.|++++||+++ +|++||+|||||++++..
T Consensus 255 ~~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~-~g~~~vlEiN~rpg~t~~-- 330 (367)
T 2pvp_A 255 PNKQEFLDFKQKYLDFSRNKAPKAS-LSNALEEQLKENFKKLYSDLFDGAIIRCDFFVI-ENEVYLNEINPIPGSLAN-- 330 (367)
T ss_dssp TTTTEEECCCCSSCCSCCCSCCCCC-CCHHHHHHHHHHHHHHHTTTSTTCCEEEEEEEE-TTEEEEEEEESSCGGGGG--
T ss_pred ecCCceEcccccccCCCeeEEecCC-CCHHHHHHHHHHHHHHHHHcCCCCEEEEEEEEE-CCeEEEEEEeCCCCCCcc--
Confidence 1 11111222 1346776 899999999999999999999999999999999 788999999999976421
Q ss_pred hhhcCCCHHHHHHHHHcCCCC
Q 009316 370 EMISSVDLIEEQIHVAMGGKL 390 (537)
Q Consensus 370 e~~tGidl~~~~i~~a~G~~l 390 (537)
.+.. |+.++..++..+..+
T Consensus 331 s~~p--~~~~l~~~li~~~~~ 349 (367)
T 2pvp_A 331 YLFD--DFKTTLENLAQSLPK 349 (367)
T ss_dssp GGSS--SHHHHHHHHHHHCC-
T ss_pred cccC--CHHHHHHHHHhCccc
Confidence 1112 888888888887654
No 55
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.97 E-value=5.1e-29 Score=255.12 Aligned_cols=264 Identities=17% Similarity=0.209 Sum_probs=186.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC-CchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~-~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
.+||+|+|+| .+..++++++++|+++++++...+.. .....++|+.+.++ .|.+ +. +++ .+|+|+|
T Consensus 2 ~m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d-~~---l~~--~~d~i~~ 68 (334)
T 2r85_A 2 KVRIATYASH-SALQILKGAKDEGFETIAFGSSKVKPLYTKYFPVADYFIEE------KYPE-EE---LLN--LNAVVVP 68 (334)
T ss_dssp CSEEEEESST-THHHHHHHHHHTTCCEEEESCGGGHHHHHTTSCCCSEEECS------SCCH-HH---HHH--TTEEECC
T ss_pred ceEEEEECCh-hHHHHHHHHHhCCCEEEEEECCCCCcccccccccCceEecC------CcCh-HH---hcc--cCCEEEE
Confidence 3589999999 99999999999999999996543321 11345677776542 1332 22 222 3588887
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeec
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~ 229 (537)
..++. .....+.++..|++++ |+++++..+.||..++++|+++|||+|++ +.+.+ +++||+||||.
T Consensus 69 ~~e~~--~~~~~~~le~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gip~p~~----~~~~~-------~l~~P~vvKP~ 134 (334)
T 2r85_A 69 TGSFV--AHLGIELVENMKVPYF-GNKRVLRWESDRNLERKWLKKAGIRVPEV----YEDPD-------DIEKPVIVKPH 134 (334)
T ss_dssp CTTHH--HHHCHHHHHTCCSCBB-SCTTHHHHHHSHHHHHHHHHHTTCCCCCB----CSCGG-------GCCSCEEEEEC
T ss_pred Ccchh--hhhHHHHHHHcCCCcc-CCHHHHHHHHhHHHHHHHHHHcCCCCCCc----cCChH-------HcCCCEEEEeC
Confidence 64321 1122345688999976 56799999999999999999999999986 34443 36799999999
Q ss_pred CCCCCcceEEeCCHHHHHHHHHHHHHHHHHhc-CCCcEEEEecccCCcEEEEEEEEeCCCC-EEEEee-eeeeec-----
Q 009316 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAF-GNDGVYLEKYVQNPRHIEFQVLADKYGN-VVHFGE-RDCSIQ----- 301 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~-g~~~vlvEe~I~g~~ei~v~v~~d~~G~-vv~~~~-r~~s~~----- 301 (537)
.|+||+|++++++.+|+..+++.+.... .| ....+++|+||+| .++++.++.+..+. +-.+.. ..+..+
T Consensus 135 ~g~~s~Gv~~v~~~~el~~~~~~~~~~~--~~~~~~~~lvee~i~G-~e~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~ 211 (334)
T 2r85_A 135 GAKGGKGYFLAKDPEDFWRKAEKFLGIK--RKEDLKNIQIQEYVLG-VPVYPHYFYSKVREELELMSIDRRYESNVDAIG 211 (334)
T ss_dssp C----TTCEEESSHHHHHHHHHHHHCCC--SGGGCCSEEEEECCCC-EEEEEEEEEETTTTEEEEEEEEEEEEEEGGGGG
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHhhc--ccCCCCcEEEEeccCC-ceeEEEEeecCcCceeeeeeeccEEEeccCccc
Confidence 9999999999999999999887664320 11 1378999999999 78887666553222 221111 011110
Q ss_pred c-----cc----ceeEEEc---CCCCCCHHHHHHHHHHHHHHHHHc-----CCcceeEEEEEEeCCCCeEEEEEeccCCC
Q 009316 302 R-----RN----QKLLEEA---PSPALTPELRKAMGDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQV 364 (537)
Q Consensus 302 ~-----~~----~k~~e~~---P~~~l~~~~~~~l~~~a~~~~~al-----g~~G~~~vEf~~~~~g~~~~lEiN~R~~g 364 (537)
+ .. ....... |+. ++++..+++.+.+.++++++ ++.|++++||+++++|++||+|||||+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~p~~-l~~~~~~~i~~~a~~~~~~l~~~~~~~~G~~~vd~~~~~~g~~~viEiN~R~g~ 290 (334)
T 2r85_A 212 RIPAKDQLEFDMDITYTVIGNIPIV-LRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFTPDLEFVVFEISARIVA 290 (334)
T ss_dssp GSCHHHHTTSCCCCCEEEEEEEECC-CCGGGHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEECTTSCEEEEEEECSCCG
T ss_pred ccccccccccccCCceeeeCCCCcc-cCHHHHHHHHHHHHHHHHHHHhhcccccccEEEEEEECCCCCEEEEEEeCCcCC
Confidence 0 00 0011122 765 88888999999999999999 88899999999998888999999999998
Q ss_pred c
Q 009316 365 E 365 (537)
Q Consensus 365 ~ 365 (537)
+
T Consensus 291 ~ 291 (334)
T 2r85_A 291 G 291 (334)
T ss_dssp G
T ss_pred C
Confidence 5
No 56
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=99.96 E-value=5.3e-28 Score=250.00 Aligned_cols=268 Identities=18% Similarity=0.227 Sum_probs=193.1
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCc---hhhccCEEEEcCCCCCCCCCCCH--HHHHHHHHHcCCCE
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL---HVKLADESVCIGEAPSSQSYLLI--PNVLSAAISRGCTM 146 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~---~~~~ad~~~~i~~~~~~~sy~~~--~~i~~~a~~~~~d~ 146 (537)
.+|+|+|+| .++.++++|+++|++|++++...+ .+ ...++|+.+.++ .|.|+ +++++.+++.+ +.
T Consensus 19 ~~I~ilGs~-l~~~l~~aAk~lG~~vi~vd~~~~--~p~~~~~~~ad~~~~~d------~~~d~~~~~~l~~l~~~~-~v 88 (361)
T 2r7k_A 19 ITIATLGSH-TSLHILKGAKLEGFSTVCITMKGR--DVPYKRFKVADKFIYVD------NFSDIKNEEIQEKLRELN-SI 88 (361)
T ss_dssp CEEEEESST-THHHHHHHHHHTTCCEEEEECTTS--CHHHHHTTCCSEEEECS------SGGGGGSHHHHHHHHHTT-EE
T ss_pred CEEEEECcH-HHHHHHHHHHHCCCEEEEEECCCC--CCcccccccCceEEECC------CcccccHHHHHHHHHHcC-CE
Confidence 569999999 999999999999999999976544 33 667899988753 35452 55666665554 66
Q ss_pred EEeCCCcccccHH---HHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCc
Q 009316 147 LHPGYGFLAENAV---FVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFP 223 (537)
Q Consensus 147 V~pg~g~lsE~~~---~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~P 223 (537)
|.|-. |+.. +..+.++.|++++| +..++....||..+|++|+++|||+|++ +.+.++ ++||
T Consensus 89 V~pe~----~~v~~~gl~~l~~~~g~~v~g-~~~a~~~e~~k~~~k~~l~~~GIptp~~----~~~~~e-------~~~P 152 (361)
T 2r7k_A 89 VVPHG----SFIAYCGLDNVENSFLVPMFG-NRRILRWESERSLEGKLLREAGLRVPKK----YESPED-------IDGT 152 (361)
T ss_dssp ECCBH----HHHHHHCHHHHHHTCCSCBBS-CGGGGGTTTCHHHHHHHHHHTTCCCCCE----ESSGGG-------CCSC
T ss_pred EEeCc----hhhhHHHHHHHHHHcCCCcCC-CHHHHHHhhhHHHHHHHHHHcCcCCCCE----eCCHHH-------cCCC
Confidence 66421 2222 22334489999886 8899999999999999999999999975 345444 3699
Q ss_pred EEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcC---CCcEEEEecccCCcEEEEEEEEeC-CCCEE--EEeeee
Q 009316 224 VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG---NDGVYLEKYVQNPRHIEFQVLADK-YGNVV--HFGERD 297 (537)
Q Consensus 224 vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g---~~~vlvEe~I~g~~ei~v~v~~d~-~G~vv--~~~~r~ 297 (537)
+||||..+++|+|+++++|.+|+.++++.+... ..|+ +..++||+||+| .++++..+..- .+++- ....|-
T Consensus 153 vVVK~~~~a~GkGv~v~~s~ee~~~a~~~~~~~--~~~~~~~~~~viIEEfl~G-~e~s~~~f~~~~~~~~e~~~id~r~ 229 (361)
T 2r7k_A 153 VIVKFPGARGGRGYFIASSTEEFYKKAEDLKKR--GILTDEDIANAHIEEYVVG-TNFCIHYFYSPLKDEVELLGMDKRY 229 (361)
T ss_dssp EEEECSCCCC---EEEESSHHHHHHHHHHHHHT--TSCCHHHHHHCEEEECCCS-EEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred EEEeeCCCCCCCCEEEECCHHHHHHHHHHHHhc--cccccCCCCeEEEEeccce-EEeeEEEEecccCCeeEEEEecceE
Confidence 999999999999999999999999999876432 1121 146999999999 67675555432 22222 222221
Q ss_pred ee-------eccccc--------ee-EEEcCCCCCCHHHHHHHHHHHHHHHHHc------CCcceeEEEEEEeCCCCeEE
Q 009316 298 CS-------IQRRNQ--------KL-LEEAPSPALTPELRKAMGDAAVAAAASI------GYIGVGTVEFLLDERGSFYF 355 (537)
Q Consensus 298 ~s-------~~~~~~--------k~-~e~~P~~~l~~~~~~~l~~~a~~~~~al------g~~G~~~vEf~~~~~g~~~~ 355 (537)
.+ +..+.| .. ....|+. +++++.+++.+.+.++++++ ++.|++++||+++++|++||
T Consensus 230 ~~~~dgi~~~~~~~~~~~~~~p~~v~~G~~Pa~-l~~~~~~~a~~~a~~v~~al~~~~~~~~~G~~~vE~fvt~dg~i~V 308 (361)
T 2r7k_A 230 ESNIDGLVRIPAKDQLEMNINPSYVITGNIPVV-IRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNENLELVV 308 (361)
T ss_dssp EEEHHHHTTSCHHHHHTCCCCCCEEEEEEEECC-CCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECTTSCEEE
T ss_pred EeecccceecchhhhhcccCCCceEEecCcCCc-CCHHHHHHHHHHHHHHHHHHHhhccCCccceEEEEEEEcCCCCEEE
Confidence 11 000000 11 1112876 88999999999999999999 88999999999998888999
Q ss_pred EEEeccCCCcccch
Q 009316 356 MEMNTRIQVEHPVT 369 (537)
Q Consensus 356 lEiN~R~~g~~~~~ 369 (537)
+|||||++|+.++.
T Consensus 309 ~EIapR~gGg~~~~ 322 (361)
T 2r7k_A 309 FEMSARVDGGTNSF 322 (361)
T ss_dssp EEEESSBCGGGGGG
T ss_pred EEEcCCCCCCcccc
Confidence 99999999884443
No 57
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=99.94 E-value=1.3e-27 Score=242.71 Aligned_cols=264 Identities=14% Similarity=0.158 Sum_probs=180.2
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCc---hhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL---HVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~---~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
.+|.++|+| .++.++.+|+++|++|++++... +++ ..++||+.+.++ .|.| ++ ...|.|.
T Consensus 3 ~~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~~--~~p~~~a~~~ad~~~~~~------~~~d------l~--~~~dvit 65 (320)
T 2pbz_A 3 LIVSTIASH-SSLQILLGAKKEGFKTRLYVSPK--RRPFYSSLPIVDDLVVAE------EMTS------IL--NDDGIVV 65 (320)
T ss_dssp -CEEEESST-THHHHHHHHHHTTCCEEEEECTT--THHHHHTCTTCSEEEECS------CSCC------TT--CCSSBCC
T ss_pred eEEEEEcCH-hHHHHHHHHHHCCCEEEEEECCC--CCccchhhhcCCeEEECC------cHHH------HH--hcCCEEE
Confidence 459999999 99999999999999999996543 344 678999998763 2544 22 3458887
Q ss_pred eCCCcccccHH--HHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEE
Q 009316 149 PGYGFLAENAV--FVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMI 226 (537)
Q Consensus 149 pg~g~lsE~~~--~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~Pvvv 226 (537)
|-. |+.. ..+.+++.|++++ |+++++....||...+++|+++|||+|+++. .+++ +++||+||
T Consensus 66 pe~----e~v~~~~l~~le~~~~p~~-p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~~-----~ee~-----~i~~PviV 130 (320)
T 2pbz_A 66 PHG----SFVAYLGIEAIEKAKARFF-GNRRFLKWETTFELQDKALEGAGIPRVEVVE-----PEDA-----KPDELYFV 130 (320)
T ss_dssp CBT----THHHHSCHHHHHTCCSCCB-SCSSGGGGGSCHHHHHHHHHHHTCCBCCBCC-----SCCC-----CSSCCEEE
T ss_pred ecc----cchhHHHHHHHHHcCCCcC-CCHHHHHHHHhHHHHHHHHHHCCcCCCCeeC-----HhHc-----CcCCcEEE
Confidence 644 4322 2344678999976 6789999999999999999999999999841 2222 58999999
Q ss_pred eecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEe-CCCCEEEEeeeeeeeccccc
Q 009316 227 KATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLAD-KYGNVVHFGERDCSIQRRNQ 305 (537)
Q Consensus 227 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d-~~G~vv~~~~r~~s~~~~~~ 305 (537)
||..|+||+|+++++| +|+..+++.+ . .++++|+||+| .++++.++.+ -.|++..++.++.-......
T Consensus 131 Kp~~g~ggkG~~~v~~-eel~~~~~~~--------~-~~~IiEEfI~g-~~~~~~~f~~~~~g~~e~~~~~~r~e~~~g~ 199 (320)
T 2pbz_A 131 RIEGPRGGSGHFIVEG-SELEERLSTL--------E-EPYRVERFIPG-VYLYVHFFYSPILERLELLGVDERVLIADGN 199 (320)
T ss_dssp ECC------------C-EECSCCCC-------------CCEEEECCCS-CEEEEEEEEETTTTEEEEEEEEEEEETTCSS
T ss_pred EECCCCCCCCEEEECh-HHHHHHHHhc--------C-CCEEEEeeece-EecceeEEeccccCceeEEEecceEEEECCe
Confidence 9999999999999999 9998766543 1 57999999999 4556555554 34566555443221111111
Q ss_pred e----------eEEEcCCCCCCHHHHHHHHHHHHHHHHHc------CCcceeEEEEEEeCCCCeEEEEEeccCCCc----
Q 009316 306 K----------LLEEAPSPALTPELRKAMGDAAVAAAASI------GYIGVGTVEFLLDERGSFYFMEMNTRIQVE---- 365 (537)
Q Consensus 306 k----------~~e~~P~~~l~~~~~~~l~~~a~~~~~al------g~~G~~~vEf~~~~~g~~~~lEiN~R~~g~---- 365 (537)
. .....|+. +++.+.+++.+.+.++++++ |+.|++++| ++++|++||+|||||++|+
T Consensus 200 ~~~p~~~~~~~~~G~~P~~-~~~~~~~~a~~~a~~i~~~L~~l~~~g~~G~~~vE--~~~dg~~~v~EIapR~~GGt~~~ 276 (320)
T 2pbz_A 200 ARWPVKPLPYTIVGNRAIA-LRESLLPQLYDYGLAFVRTMRELEPPGVIGPFALH--FAYDGSFKAIGIASRIDGGSNAD 276 (320)
T ss_dssp SSSCCSCCCCCEEEEEECE-ECGGGHHHHHHHHHHHHHHHHHHSTTCCCSEEEEE--EECSSSCEEEEEESSBCSGGGSC
T ss_pred eecccCCCceeeecCCCCc-cCHHHHHHHHHHHHHHHHHHHhhccCCceeeEEEE--EcCCCcEEEEEecCCCCCCCCcc
Confidence 1 11112665 78888899999999999999 999999999 5777789999999999887
Q ss_pred ccchhh--hcCCCHHHHH
Q 009316 366 HPVTEM--ISSVDLIEEQ 381 (537)
Q Consensus 366 ~~~~e~--~tGidl~~~~ 381 (537)
+|.+.. .-+++..+..
T Consensus 277 ~~y~~~~~~~~~~~g~r~ 294 (320)
T 2pbz_A 277 HWYSELYWGERLSMGRRI 294 (320)
T ss_dssp CCCHHHHSSSCCCHHHHH
T ss_pred CCceeeeecCCCCHHHHH
Confidence 443332 2355555443
No 58
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.94 E-value=5.5e-26 Score=230.57 Aligned_cols=210 Identities=14% Similarity=0.156 Sum_probs=164.2
Q ss_pred HHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCH
Q 009316 132 IPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQST 210 (537)
Q Consensus 132 ~~~i~~~a~~~~~d~V~pg-~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~ 210 (537)
.+.+.++++ .+|++++. +|.......+.+.++..| +++|+++++++.+.||..+++++++ |||+|++. .
T Consensus 60 ~~~l~~~~~--~~D~~~~i~~~ed~~l~~~~~~l~~~g-~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~--~---- 129 (305)
T 3df7_A 60 MDSMEKYLE--KSDAFLIIAPEDDFLLYTLTKKAEKYC-ENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTS--L---- 129 (305)
T ss_dssp GGGHHHHHT--TCSEEEEECCCGGGHHHHHHHHHHTTS-EESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEE--S----
T ss_pred HHHHHHHHH--hcCEEEEEccCCcHHHHHHHHHHHhcC-CccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEe--c----
Confidence 346666664 57776654 332222245666677777 7899999999999999999999999 99999983 2
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCE
Q 009316 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (537)
Q Consensus 211 ~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~v 290 (537)
++++||+|+||..|+||+|++++++ .+..+++|+||+| +|++|.++.+ + .+
T Consensus 130 -------~~~~~P~vvKP~~g~gs~Gv~~v~~-------------------~~~~~lvEe~I~G-~e~sv~v~~g-~-~~ 180 (305)
T 3df7_A 130 -------RPLDCKFIIKPRTACAGEGIGFSDE-------------------VPDGHIAQEFIEG-INLSVSLAVG-E-DV 180 (305)
T ss_dssp -------SCCSSSEEEEESSCC----CBCCSS-------------------CCTTEEEEECCCS-EEEEEEEEES-S-SE
T ss_pred -------ccCCCCEEEEeCCCCCCCCEEEEec-------------------CCCCEEEEeccCC-cEEEEEEEeC-C-eE
Confidence 3679999999999999999999998 2588999999998 9999999974 2 45
Q ss_pred EEEeeeeeeeccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCeEEEEEeccCCCcccch
Q 009316 291 VHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVT 369 (537)
Q Consensus 291 v~~~~r~~s~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~al-g~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~ 369 (537)
..+..... ............|+. ++++..+++.+.+.++++++ |+.|++++||+++ |++||+|||||++++....
T Consensus 181 ~~~~~~~~-~~~~~~~~g~~~p~~-l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD~~~~--~~~~viEiNpR~~~~~~~~ 256 (305)
T 3df7_A 181 KCLSVNEQ-IINNFRYAGAVVPAR-ISDEVKREVVEEAVRAVECVEGLNGYVGVDIVYS--DQPYVIEINARLTTPVVAF 256 (305)
T ss_dssp EEEEEEEE-EEETTEEEEEEESCC-CCHHHHHHHHHHHHHHHTTSTTCCEEEEEEEEES--SSEEEEEEESSCCGGGGGH
T ss_pred EEEEEeeE-eccCceeccccccCC-CCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEC--CCEEEEEEcCCCCCCHHHH
Confidence 44443211 111122334467776 89999999999999999999 9999999999996 5699999999999988777
Q ss_pred hhhcCCCHHHHHHHH
Q 009316 370 EMISSVDLIEEQIHV 384 (537)
Q Consensus 370 e~~tGidl~~~~i~~ 384 (537)
+.++|+|+.++++++
T Consensus 257 ~~~~G~~~~~~~~~~ 271 (305)
T 3df7_A 257 SRAYGASVADLLAGG 271 (305)
T ss_dssp HHHHSCCHHHHHTTC
T ss_pred HHHHCCCHHHHHHhc
Confidence 889999999999998
No 59
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.90 E-value=5e-23 Score=208.42 Aligned_cols=288 Identities=13% Similarity=0.047 Sum_probs=187.0
Q ss_pred CEEEEEcCc--------HHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCE-EEEcCCCCCCCCCCC--HHHHHHHHH
Q 009316 72 EKILVANRG--------EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADE-SVCIGEAPSSQSYLL--IPNVLSAAI 140 (537)
Q Consensus 72 ~~iLI~~~g--------~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~-~~~i~~~~~~~sy~~--~~~i~~~a~ 140 (537)
+||+|+..+ ..+..++++++++|+++++++.+..........++. .+.+.. ..+.+.. .+.+..
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 76 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQ--NYEEWFSFVGEQDLP--- 76 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGEEEETTEEEEEEEEEEECS--CSSCCEEEEEEEEEE---
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhHeEEECCeEEEEEeeeEecc--CcccceeccCccccc---
Confidence 468877766 347889999999999999996432211110111211 111211 0111111 000111
Q ss_pred HcCCCEEEeCCCccc--cc---HHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHH
Q 009316 141 SRGCTMLHPGYGFLA--EN---AVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK 215 (537)
Q Consensus 141 ~~~~d~V~pg~g~ls--E~---~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~ 215 (537)
..++|+|++..+... |. ..+.+.++..|++++ ++++++..+.||..++++++ |+|++ ..+.+.+++.+
T Consensus 77 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~----~~P~t--~~~~~~~~~~~ 149 (316)
T 1gsa_A 77 LADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIV-NKPQSLRDCNEKLFTAWFSD----LTPET--LVTRNKAQLKA 149 (316)
T ss_dssp GGGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEE-SCHHHHHHCCTTGGGGGGTT----TSCCE--EEESCHHHHHH
T ss_pred cccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEe-cCHHHHHhhhhHHHHHhhhh----cCCCe--EEeCCHHHHHH
Confidence 135899998653211 11 245667778999876 68999999999999999987 99998 67789999999
Q ss_pred HHHhcCCcEEEeecCCCCCcceEEeC-CHHHHHHHHHHHHHHHHHhcCCCcEEEEecccC--CcEEEEEEEEeCCCCEEE
Q 009316 216 LADELGFPVMIKATAGGGGRGMRLAK-EPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN--PRHIEFQVLADKYGNVVH 292 (537)
Q Consensus 216 ~~~~ig~PvvvKp~~g~gg~Gv~~v~-~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g--~~ei~v~v~~d~~G~vv~ 292 (537)
+++++| |+|+||..|+||+|+.+++ +.+++..+++.+.. .+...+++|+||+| ..++++.++ +|+++.
T Consensus 150 ~~~~~~-p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~~-----~~~~~~lvqe~i~~~~~~~~~v~~~---~g~~~~ 220 (316)
T 1gsa_A 150 FWEKHS-DIILKPLDGMGGASIFRVKEGDPNLGVIAETLTE-----HGTRYCMAQNYLPAIKDGDKRVLVV---DGEPVP 220 (316)
T ss_dssp HHHHHS-SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHTT-----TTTSCEEEEECCGGGGGCEEEEEEE---TTEECS
T ss_pred HHHHcC-CEEEEECCCCCcccEEEecCChHHHHHHHHHHHh-----cCCceEEEecccCCCCCCCEEEEEE---CCEEee
Confidence 998999 9999999999999999998 88899887765321 22478999999998 456666554 345554
Q ss_pred -Eeeeeee--ecccc-ceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCeEEEEEeccCCCcccc
Q 009316 293 -FGERDCS--IQRRN-QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPV 368 (537)
Q Consensus 293 -~~~r~~s--~~~~~-~k~~e~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~ 368 (537)
...|... ..+.+ ..-....|.. ++++.. ++...+.+.++++|+ +.+.+||+ | .||||||+|.+++...
T Consensus 221 ~~~~r~~~~~~~~~~~~~gg~~~~~~-~~~~~~-~~a~~~~~~l~~~g~-~~~~vD~~----g-~~~iEvN~r~~~~~~~ 292 (316)
T 1gsa_A 221 YCLARIPQGGETRGNLAAGGRGEPRP-LTESDW-KIARQIGPTLKEKGL-IFVGLDII----G-DRLTEINVTSPTCIRE 292 (316)
T ss_dssp EEEEEECCSSCSCCCGGGTCEEEEEE-CCHHHH-HHHHHHHHHHHHTTC-CEEEEEEE----T-TEEEEEECSSCCCHHH
T ss_pred eEEEEeCCCCCceeEEccCCccccCC-CCHHHH-HHHHHHHHHHHhCCC-cEEEEEec----C-CEEEEEcCCCCcchHH
Confidence 2222210 00111 0011123433 454332 333444444455687 67789998 6 4899999997556666
Q ss_pred hhhhcCCCHHHHHHHHHcCC
Q 009316 369 TEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 369 ~e~~tGidl~~~~i~~a~G~ 388 (537)
++..+|+|+.+..++...+.
T Consensus 293 ~~~~~g~~~~~~~~~~~~~~ 312 (316)
T 1gsa_A 293 IEAEFPVSITGMLMDAIEAR 312 (316)
T ss_dssp HHHHSSCCHHHHHHHHHHHH
T ss_pred HHHhhCcCHHHHHHHHHHHH
Confidence 77889999999999887653
No 60
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.88 E-value=8.1e-22 Score=201.09 Aligned_cols=242 Identities=12% Similarity=0.155 Sum_probs=167.8
Q ss_pred CCEEEEEcCc-HHHHHHHHHHHHcCCcE--EEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 71 QEKILVANRG-EIAVRVIRTAHEMGIPC--VAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~~iLI~~~g-~ia~~ii~aa~~~Gi~~--v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
+++|+|+... .....++++++++|+++ +.++.+. .+. +.. ..+|+|
T Consensus 11 ~m~i~il~~~~~~s~~l~~al~~~G~~v~~~~~d~~~--------------~~~-------~~~----------~~~d~v 59 (324)
T 1z2n_X 11 TVSLFIWLPESKQKTLFISTKNHTQFELNNIIFDVTL--------------STE-------LPD----------KEPNAI 59 (324)
T ss_dssp EEEEEEECCHHHHHHHBSSCCSEEEEEETTEEEEEEE--------------ESS-------CCS----------SCCSEE
T ss_pred cEEEEEEEchhhhhhhHHHHHHhcCcEEEEEEecCCC--------------Ccc-------ccC----------CCceEE
Confidence 4578888742 23337888899999999 8885421 010 000 157888
Q ss_pred EeCCCcc-cccHHHHHHHHH--CCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhc--CC
Q 009316 148 HPGYGFL-AENAVFVEMCRE--HGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADEL--GF 222 (537)
Q Consensus 148 ~pg~g~l-sE~~~~a~~~e~--~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~i--g~ 222 (537)
++..+.. .+.....+.++. .|++++ ++++++..+.||..++++|+++|||+|++ ..+.+.+++.+++++. +|
T Consensus 60 ~~~~~~~~~~~~~~l~~~~~~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~P~~--~~~~~~~~~~~~~~~~~~~~ 136 (324)
T 1z2n_X 60 ITKRTHPVGKMADEMRKYEKDHPKVLFL-ESSAIHDMMSSREEINALLIKNNIPIPNS--FSVKSKEEVIQLLQSKQLIL 136 (324)
T ss_dssp EECCSCSSSHHHHHHHHHHHHCTTSEEE-TCHHHHHHHTBHHHHHHHHHHTTCCCSCE--EEESSHHHHHHHHHTTCSCS
T ss_pred EEeccchHHHHHHHHHHHHHhCCCCeEe-CCHHHHHHHhCHHHHHHHHHHCCCCCCCE--EEeCCHHHHHHHHHHcCCCC
Confidence 8764321 111222333333 788865 88999999999999999999999999998 6778888888888775 49
Q ss_pred cEEEeecCCCCC---cceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccC-CcEEEEEEEEeCCCCEEEEeeeee
Q 009316 223 PVMIKATAGGGG---RGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-PRHIEFQVLADKYGNVVHFGERDC 298 (537)
Q Consensus 223 PvvvKp~~g~gg---~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g-~~ei~v~v~~d~~G~vv~~~~r~~ 298 (537)
|+|+||..|.|| +|+.++++.+++.. + +..+++|+||++ ++++++.+++ |+++....+..
T Consensus 137 P~vvKP~~g~g~~~s~gv~~v~~~~~l~~------------~-~~~~lvqe~i~~~g~~~~v~v~g---~~~~~~~~~~~ 200 (324)
T 1z2n_X 137 PFIVKPENAQGTFNAHQMKIVLEQEGIDD------------I-HFPCLCQHYINHNNKIVKVFCIG---NTLKWQTRTSL 200 (324)
T ss_dssp SEEEEESBCSSSSGGGEEEEECSGGGGTT------------C-CSSEEEEECCCCTTCEEEEEEET---TEEEEEEECCC
T ss_pred CEEEeeCCCCCCccceeeEEEeCHHHHhh------------c-CCCEEEEEccCCCCcEEEEEEEC---CEEEEEEecCc
Confidence 999999999999 99999999888652 1 478999999985 4788887763 35554422111
Q ss_pred e-ec----------c-------------------------ccceeEEEcCCCCCCHHHH-HHHHHHHHHHHHHcCCccee
Q 009316 299 S-IQ----------R-------------------------RNQKLLEEAPSPALTPELR-KAMGDAAVAAAASIGYIGVG 341 (537)
Q Consensus 299 s-~~----------~-------------------------~~~k~~e~~P~~~l~~~~~-~~l~~~a~~~~~alg~~G~~ 341 (537)
. +. . .........+. .+.... +++.+.+.++++++|+. .+
T Consensus 201 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~a~~~~~~lg~~-~~ 277 (324)
T 1z2n_X 201 PNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPI--LLNLTSEAEMRDLAYKVRCALGVQ-LC 277 (324)
T ss_dssp CCCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCSCTT--TTTSCCHHHHHHHHHHHHHHHTCS-EE
T ss_pred ccccCCCccceeeccccchhhhccccccccccccccccccchhhccccCCc--cccCCCHHHHHHHHHHHHHHhCCc-EE
Confidence 0 00 0 00000000111 122222 68889999999999996 88
Q ss_pred EEEEEEe-CCCCeEEEEEeccCCCc
Q 009316 342 TVEFLLD-ERGSFYFMEMNTRIQVE 365 (537)
Q Consensus 342 ~vEf~~~-~~g~~~~lEiN~R~~g~ 365 (537)
++||+++ ++|++||||||+|++..
T Consensus 278 ~vD~~~~~~~g~~~vlEvN~~Pg~~ 302 (324)
T 1z2n_X 278 GIDFIKENEQGNPLVVDVNVFPSYG 302 (324)
T ss_dssp EEEEECGGGCSSCEEEEEEESCCTT
T ss_pred eeEEEEEcCCCCEEEEEEcCCCCcC
Confidence 9999998 56899999999999654
No 61
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.87 E-value=1.4e-22 Score=226.40 Aligned_cols=240 Identities=22% Similarity=0.222 Sum_probs=181.8
Q ss_pred CCHHHHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCce-------eCCCHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 009316 130 LLIPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINF-------IGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 130 ~~~~~i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~-------iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
.+.+.|+++|++.++|+++.+ ++..|++++...++.+ .||+..++..++||..+|++|+++|||+|++
T Consensus 433 ~st~~Iv~~A~~~gid~~vlg-----~e~~l~~lg~~~~~~~ig~~~~t~~~s~~aa~~~~DK~~tk~lL~~~GIPvP~~ 507 (757)
T 3ln7_A 433 LSTQALLFDVIQKGIHTEILD-----ENDQFLCLKYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQS 507 (757)
T ss_dssp HHHHHHHHHHHHHTCEEEEEE-----TTTTEEEEEETTEEEEEETTTBCSSSBSHHHHHHHHSHHHHHHHHHHTCCCCCE
T ss_pred CCHHHHHHHHHHhCCCEEEEC-----CCHHHHHhcccccceeeccCccCCCCHHHHHHHhcCHHHHHHHHHHCCcCCCCE
Confidence 568899999999999999754 4444443343333444 4567799999999999999999999999999
Q ss_pred CCcCCCCHHHHHHHH-HhcCCcEEEeecCCCCCcceEEe----CCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcE
Q 009316 203 SDGLLQSTEEAVKLA-DELGFPVMIKATAGGGGRGMRLA----KEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRH 277 (537)
Q Consensus 203 ~~~~v~~~~~~~~~~-~~ig~PvvvKp~~g~gg~Gv~~v----~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~e 277 (537)
..+.+.+++.+++ +.+|||+||||..|++|+||+++ ++.+++.++++.+... +..++||+||+| +|
T Consensus 508 --~~~~~~~ea~~~~~~~~g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~~------~~~vlVEefI~G-~E 578 (757)
T 3ln7_A 508 --VEFTSLEKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFRE------DKEVMVEDYLVG-TE 578 (757)
T ss_dssp --EEESCHHHHHHGGGGSSSSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHHH------CSSEEEEECCCS-EE
T ss_pred --EEECCHHHHHHHHHHhcCCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHhc------CCcEEEEEcCCC-cE
Confidence 6788999987776 78999999999999999999999 8999999999877643 478999999999 99
Q ss_pred EEEEEEEeCCCCEEEEeeeeeee-c------------------cc---cce-----------------------------
Q 009316 278 IEFQVLADKYGNVVHFGERDCSI-Q------------------RR---NQK----------------------------- 306 (537)
Q Consensus 278 i~v~v~~d~~G~vv~~~~r~~s~-~------------------~~---~~k----------------------------- 306 (537)
++|.+++ |+++....|.... . ++ +..
T Consensus 579 i~v~Vlg---gkvvaai~R~p~~VvGDG~~ti~eLi~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~G 655 (757)
T 3ln7_A 579 YRFFVLG---DETLAVLLRVPANVVGDSVHSVAELVAMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKD 655 (757)
T ss_dssp EEEEEET---TEEEEEEEECCSEEEGGGCCCHHHHHHHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSS
T ss_pred EEEEEEC---CEEEEEEEEecccccCCCcccHHHHHHhhcccccccccccCccccccccHHHHHHHHHcCCCccccCCCC
Confidence 9999984 4777776654210 0 00 000
Q ss_pred -eEE---------EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC--------CCCeEEEEEeccCCCc-cc
Q 009316 307 -LLE---------EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE--------RGSFYFMEMNTRIQVE-HP 367 (537)
Q Consensus 307 -~~e---------~~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~--------~g~~~~lEiN~R~~g~-~~ 367 (537)
.+. ...+..+++.+.+++.+.|.++++++|+ .++.||++.++ .+.+.+||||.+++-. |.
T Consensus 656 e~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa~~lGl-~~~GvDli~~di~~p~~~~~~~~~iiEvN~~P~~~~h~ 734 (757)
T 3ln7_A 656 QLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGITKAMGA-AVCGVDLIIPDLKQPATPNLTSWGVIEANFNPMMMMHI 734 (757)
T ss_dssp CEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHHHHHTC-SEEEEEEEESCSSSCCCSSTTTCEEEEEESSCCHHHHH
T ss_pred CEEEeecccccccCccceeccccCCHHHHHHHHHHHHHhCC-CEEEEEEEecCccccccccCCCeEEEEEcCCcchhhhh
Confidence 000 0001123445667888999999999999 58889999873 2458999999999543 33
Q ss_pred chhhhcCCCHHHHHHHHHcC
Q 009316 368 VTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 368 ~~e~~tGidl~~~~i~~a~G 387 (537)
.....+|.|+.+..++....
T Consensus 735 ~p~~g~~~~v~~~ii~~lfp 754 (757)
T 3ln7_A 735 FPYAGKSRRLTQNVIKMLFP 754 (757)
T ss_dssp SCSSSCCCCCHHHHHHHHCT
T ss_pred ccccCCCCchHHHHHHHhcC
Confidence 33456899999999987653
No 62
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.83 E-value=1.1e-20 Score=211.83 Aligned_cols=241 Identities=17% Similarity=0.215 Sum_probs=175.0
Q ss_pred CHHHHHHHHHHcCCCEEEeC--CCcccccHHHH-HHHHHCCCceeCCC-HHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC
Q 009316 131 LIPNVLSAAISRGCTMLHPG--YGFLAENAVFV-EMCREHGINFIGPN-PDSIRIMGDKSTARETMKNAGVPTVPGSDGL 206 (537)
Q Consensus 131 ~~~~i~~~a~~~~~d~V~pg--~g~lsE~~~~a-~~~e~~Gl~~iGp~-~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~ 206 (537)
+.+.|+++|++.|+++++.+ .+++....... +.+....+ .|++ ..++..++||..+|++|+++|||+|++ ..
T Consensus 429 S~~~l~~aA~~~Gi~v~vidp~~~l~~l~~~~~~~~~~~g~i--tg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~--~~ 504 (750)
T 3ln6_A 429 STQLLLFDVIQKGVNFEVLDEQDQFLKLWHNSHIEYVKNGNM--TSKDNYIVPLAMANKVVTKKILDEKHFPTPFG--DE 504 (750)
T ss_dssp HHHHHHHHHHHHTCEEEESCSSSCEEEEEETTEEEEEETTTB--CTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCC--CC
T ss_pred cHHHHHHHHHhCCCCEEEECCCchHhhhccCCCcEEEecCCe--eCCCHHHHHHHHhCHHHHHHHHHHCCcCCCCE--EE
Confidence 57889999999999996644 44543331110 00001122 2444 456777789999999999999999999 67
Q ss_pred CCCHHHHHHHH-HhcCCcEEEeecCCCCCcceEEeC---CHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEE
Q 009316 207 LQSTEEAVKLA-DELGFPVMIKATAGGGGRGMRLAK---EPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQV 282 (537)
Q Consensus 207 v~~~~~~~~~~-~~ig~PvvvKp~~g~gg~Gv~~v~---~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v 282 (537)
+.+.+++.+++ +.+|||+||||..|++|+||.+++ +.+++.++++.+... +..++||+||+| +|++|.+
T Consensus 505 ~~~~~ea~~~~~~~~g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~~~~~~------~~~vlVEefI~G-~E~~v~V 577 (750)
T 3ln6_A 505 FTDRKEALNYFSQIQDKPIVVKPKSTNFGLGISIFKTSANLASYEKAIDIAFTE------DSAILVEEYIEG-TEYRFFV 577 (750)
T ss_dssp EETTTTHHHHHHHSSSSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEE
T ss_pred ECCHHHHHHHHHHhcCCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHHHHHhh------CCcEEEEeccCC-CEEEEEE
Confidence 78888887777 678999999999999999999998 999999999887643 478999999999 9999999
Q ss_pred EEeCCCCEEEEeeeeeee--------------------cc--ccceeEE--------------------EcC--------
Q 009316 283 LADKYGNVVHFGERDCSI--------------------QR--RNQKLLE--------------------EAP-------- 312 (537)
Q Consensus 283 ~~d~~G~vv~~~~r~~s~--------------------~~--~~~k~~e--------------------~~P-------- 312 (537)
++ |+++....|.... .+ .+.+..+ ..|
T Consensus 578 vg---g~vvaa~~r~p~~v~GdG~~tI~eLI~~~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L 654 (750)
T 3ln6_A 578 LE---GDCIAVLLRVAANVVGDGIHTISQLVKLKNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIEL 654 (750)
T ss_dssp ET---TEEEEEEEEECCEEECCTTCCHHHHHHHHTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEES
T ss_pred EC---CEEEEEEEEecceEecCCccCHHHHHHhhccCccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEE
Confidence 84 3777665553211 00 0000000 000
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC--------CCCeEEEEEeccCCCc-ccchhhh
Q 009316 313 -----------SPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE--------RGSFYFMEMNTRIQVE-HPVTEMI 372 (537)
Q Consensus 313 -----------~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~--------~g~~~~lEiN~R~~g~-~~~~e~~ 372 (537)
+..+++.+..++.+.|.++++++|+. ++.||++.++ .|.+++||+|++++-. |......
T Consensus 655 ~~~~Nls~Gg~~~d~td~i~p~~~~~a~~aa~~igl~-~~GvDli~~di~~~~~~~~~~~~iiEvN~~pg~~~h~~p~~g 733 (750)
T 3ln6_A 655 RRNSNISTGGDSIDVTNTMDPTYKQLAAEMAEAMGAW-VCGVDLIIPNATQAYSKDKKNATCIELNFNPLMYMHTYCQEG 733 (750)
T ss_dssp CSSCCTTTTCEEEECTTTSCHHHHHHHHHHHHHHTCS-SCEEEEEESCSSSCCCTTTTCCEEEEEESSCCCHHHHSCSBS
T ss_pred eecccccCCCceeeccccCCHHHHHHHHHHHHHhCCC-eEEEEEEecCccccccccCCCeEEEEEcCCcchhhhcCcccC
Confidence 00124456678889999999999985 8889999974 4568999999999654 4444567
Q ss_pred cCCCHHHHHHHHHc
Q 009316 373 SSVDLIEEQIHVAM 386 (537)
Q Consensus 373 tGidl~~~~i~~a~ 386 (537)
+|.|+.+..++...
T Consensus 734 ~~~~v~~~ii~~lf 747 (750)
T 3ln6_A 734 PGQSITPRILAKLF 747 (750)
T ss_dssp CCCCCHHHHHHHHC
T ss_pred CCCcHHHHHHHHhC
Confidence 89999999888653
No 63
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.82 E-value=3.5e-20 Score=181.13 Aligned_cols=177 Identities=20% Similarity=0.283 Sum_probs=139.3
Q ss_pred hcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCC-----CCCcceEE-eCCHHHHHHHHHHHHH
Q 009316 182 MGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAG-----GGGRGMRL-AKEPDEFVKLLQQAKS 255 (537)
Q Consensus 182 ~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g-----~gg~Gv~~-v~~~~el~~~~~~~~~ 255 (537)
..||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||..+ ++|.|+.+ ++|.+|+.++++.+..
T Consensus 19 ~l~k~~~k~ll~~~GIp~p~~--~~~~~~~ea~~~a~~lg~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~ 96 (238)
T 1wr2_A 19 AMVEYEAKQVLKAYGLPVPEE--KLAKTLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHE 96 (238)
T ss_dssp EECHHHHHHHHHTTTCCCCCC--EEESSHHHHHHHHHHHCSSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCcCCCCe--EEeCCHHHHHHHHHHhCCCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHH
Confidence 359999999999999999999 678999999999999999999999999 77888998 7999999999999887
Q ss_pred HHHHhcC---CCcEEEEecccCCcEEEEEEEEeC-CCCEEEEeeeeeeeccccceeEEEcCCCCCCHHHHHHHHHHHHHH
Q 009316 256 EAAAAFG---NDGVYLEKYVQNPRHIEFQVLADK-YGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAA 331 (537)
Q Consensus 256 ~~~~~~g---~~~vlvEe~I~g~~ei~v~v~~d~-~G~vv~~~~r~~s~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~ 331 (537)
.....++ ...++||+||++++|+.+.++.|. .|.++.++.-...+........... | ++++..++|.+.+.++
T Consensus 97 ~~~~~~~~~~~~~vlVEe~i~~g~E~~v~v~~d~~~g~v~~~~~Gg~~iE~~~d~~~~~~--P-l~~~~~~~~~~~~~~~ 173 (238)
T 1wr2_A 97 NAKKYRPDAEILGVLVAPMLKPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLV--P-ITEKDARKMIQEIKAY 173 (238)
T ss_dssp HHHHHCTTCCCCEEEEEECCCCCEEEEEEEEEETTTEEEEEEEECSTTHHHHCCCEEEES--S-CCHHHHHHHHHTSTTH
T ss_pred hhhhhCCCCccceEEEEECCCCCeEEEEEEEeCCCCCcEEEEecCCceeeeecceeeecC--C-CCHHHHHHHHHHHHHH
Confidence 6654444 368999999996699999999998 6788777642111111111222233 3 8999999999999999
Q ss_pred HHHcCCcceeEEEE------------EEeCCCC-eEEEEEeccCC
Q 009316 332 AASIGYIGVGTVEF------------LLDERGS-FYFMEMNTRIQ 363 (537)
Q Consensus 332 ~~alg~~G~~~vEf------------~~~~~g~-~~~lEiN~R~~ 363 (537)
...+||+|...+++ ++.+.++ ++++||||++-
T Consensus 174 ~~~~g~~G~~~~d~~~l~~~l~~l~~~~~~~~~~~~~lEINPl~~ 218 (238)
T 1wr2_A 174 PILAGARGEEPADIDAIVDMLLKVSKLVDDLKDYIKEMDLNPVFV 218 (238)
T ss_dssp HHHHCC--CCCBCHHHHHHHHHHHHHHHHHTTTTEEEEEEEEEEE
T ss_pred HHhcCCCCCChhhHHHHHHHHHHHHHHHHcCCCCeEEEeccCeEE
Confidence 99999999766553 1233334 99999999984
No 64
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.80 E-value=1.8e-18 Score=174.27 Aligned_cols=219 Identities=15% Similarity=0.127 Sum_probs=158.4
Q ss_pred CCCEEEeCCCccc--cc---HHHHHHHHHCCCceeCCCHHHHHHhcCH----HHHHHHHHHcCC---CCCCCCCcCCCCH
Q 009316 143 GCTMLHPGYGFLA--EN---AVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (537)
Q Consensus 143 ~~d~V~pg~g~ls--E~---~~~a~~~e~~Gl~~iGp~~~~i~~~~dK----~~~r~~l~~~Gv---pvp~~~~~~v~~~ 210 (537)
..|+|++..+... ++ -.+...++..|++.+ ++++++..++|| ..+-++++++|+ |.++.. ...+.
T Consensus 68 ~~D~vi~R~~~~~~~~~~~~r~vl~~le~~Gvpvi-N~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~--~~~~~ 144 (309)
T 1i7n_A 68 RPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSI-NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQT--YYPNH 144 (309)
T ss_dssp CCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCE--EESSG
T ss_pred cCCEEEEecccccccccchHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEE--eeCCh
Confidence 4789988765433 22 345677999999998 799999999999 667778889998 866652 23333
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCE
Q 009316 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (537)
Q Consensus 211 ~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~v 290 (537)
.+ ..+..|||+|+||..|+.|+||.++++.+++.+.++..... +..+++||||+..+++.+.++++ ++
T Consensus 145 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VvGg---~v 212 (309)
T 1i7n_A 145 RE---MLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALT------QTYATAEPFIDAKYDIRVQKIGN---NY 212 (309)
T ss_dssp GG---GSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeecCCCceEEEEEECC---EE
Confidence 33 45568999999999999999999999999999888765433 37799999999778999999844 56
Q ss_pred EEEeeee--eeeccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCeEEEEEec--cCCCc
Q 009316 291 VHFGERD--CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVE 365 (537)
Q Consensus 291 v~~~~r~--~s~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~al-g~~G~~~vEf~~~~~g~~~~lEiN~--R~~g~ 365 (537)
+.+..+. -.++. +.......+.+ ++++ +.+.|.++.+++ |+ +++.||++.+.+|.+|++|+|. -++-+
T Consensus 213 ~a~~Rr~~~g~wrt-N~~~~~~e~~~-l~~e----~~~la~~A~~a~gGl-di~GVDll~~~~g~~~V~EVN~~~~P~~~ 285 (309)
T 1i7n_A 213 KAYMRTSISGNWKT-NTGSAMLEQIA-MSDR----YKLWVDACSEMFGGL-DICAVKAVHGKDGKDYIFEVMDCSMPLIG 285 (309)
T ss_dssp EEEEEESSCTTTSC-SCCCSSEEEEC-CCHH----HHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCCCCS
T ss_pred EEEEEEcCCCCCee-cCCcceeeecC-CCHH----HHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEECCCCCCCcc
Confidence 6443331 11222 21111111222 4554 568888999999 56 8899999999889899999999 66432
Q ss_pred ccchhhhcCCCHHHHHHHHH
Q 009316 366 HPVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 366 ~~~~e~~tGidl~~~~i~~a 385 (537)
-++..++.++.+..+...
T Consensus 286 --~~~~~~~~~ia~~ii~~~ 303 (309)
T 1i7n_A 286 --EHQVEDRQLITDLVISKM 303 (309)
T ss_dssp --SCHHHHHHHHHHHHHHHH
T ss_pred --chhhhhHHHHHHHHHHHH
Confidence 444557777777776543
No 65
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.80 E-value=2.7e-18 Score=175.02 Aligned_cols=221 Identities=12% Similarity=0.076 Sum_probs=163.2
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHCCCceeCCCHHHHHHhcCH----HHHHHHHHHcCC---CCCCCCCcCCCCH
Q 009316 143 GCTMLHPGYGFLA--E---NAVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (537)
Q Consensus 143 ~~d~V~pg~g~ls--E---~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK----~~~r~~l~~~Gv---pvp~~~~~~v~~~ 210 (537)
..|+|++..+..+ + .-.+...++..|++++ ++++++..++|| ..+-+++.++|+ |.++.. ...+.
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~Gvpvi-N~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t--~~~~~ 161 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAV-NSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQT--FFPNH 161 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEE-SCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCE--EESSS
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceec-CCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEE--ecCch
Confidence 5899999866532 2 1345677999999998 799999999999 667778889988 866652 22332
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCE
Q 009316 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (537)
Q Consensus 211 ~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~v 290 (537)
. +..+.+|||+|+||..|+.|+||.++++.+++...++..... +..+++||||+..+++.|.++++ ++
T Consensus 162 ~---~~~~~~g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VVGg---~v 229 (344)
T 2p0a_A 162 K---PMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMA------KTYATTEAFIDSKYDIRIQKIGS---NY 229 (344)
T ss_dssp T---TCCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETT---EE
T ss_pred h---hhhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeccCCCccEEEEEECC---EE
Confidence 2 235578999999999999999999999999999888655432 37789999999778999999844 56
Q ss_pred EEEeeee--eeeccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCeEEEEEec--cCCCc
Q 009316 291 VHFGERD--CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVE 365 (537)
Q Consensus 291 v~~~~r~--~s~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~al-g~~G~~~vEf~~~~~g~~~~lEiN~--R~~g~ 365 (537)
+.+..+. -.++. +..-....+.+ ++++ +.+.+.++.+++ |+ +++.||++.+.+|.+|++|+|. .+ +
T Consensus 230 va~~R~~~~g~wrt-N~~~~~~e~~~-l~~e----~~~la~~Aa~a~gGl-di~GVDll~~~~G~~~VlEVN~~~~P--~ 300 (344)
T 2p0a_A 230 KAYMRTSISGNWKA-NTGSAMLEQVA-MTER----YRLWVDSCSEMFGGL-DICAVKAVHSKDGRDYIIEVMDSSMP--L 300 (344)
T ss_dssp EEEEEEESSSCSST-TSSSEEEEEEC-CCHH----HHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCC--C
T ss_pred EEEEEecCCCCCee-cCCceEEEeeC-CCHH----HHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEEcCCCCC--c
Confidence 6543322 11222 22122222333 5554 558888999999 56 8899999999889899999999 65 3
Q ss_pred ccchhhhcCCCHHHHHHHHHcC
Q 009316 366 HPVTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 366 ~~~~e~~tGidl~~~~i~~a~G 387 (537)
..-++..++.++.+..++-..-
T Consensus 301 ~~~~~~~~~~~Ia~~ii~~i~~ 322 (344)
T 2p0a_A 301 IGEHVEEDRQLMADLVVSKMSQ 322 (344)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHT
T ss_pred ccchhhhHHHHHHHHHHHHHHH
Confidence 4456667889999998887754
No 66
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.79 E-value=3.9e-18 Score=176.69 Aligned_cols=219 Identities=12% Similarity=0.100 Sum_probs=160.6
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHCCCceeCCCHHHHHHhcCH----HHHHHHHHHcCC---CCCCCCCcCCCCH
Q 009316 143 GCTMLHPGYGFLA--E---NAVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (537)
Q Consensus 143 ~~d~V~pg~g~ls--E---~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK----~~~r~~l~~~Gv---pvp~~~~~~v~~~ 210 (537)
..|+|++..+... + .-.+...++..|++++ ++++++.+++|| ..+-.+++++|+ |.++.. ...+.
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~Gvpvi-Ns~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t--~~~~~ 256 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSV-NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQT--FYPNH 256 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCE--EESSG
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceE--ecCch
Confidence 4789988765433 2 1345677999999998 799999999999 566777888988 766652 23333
Q ss_pred HHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCCcEEEEEEEEeCCCCE
Q 009316 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (537)
Q Consensus 211 ~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~~ei~v~v~~d~~G~v 290 (537)
.+ +.+..|||+||||..|+.|+||.++++.+++...++..... +..+++||||+..+++.|.|+++ ++
T Consensus 257 ~~---~i~~~g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~~------~~~~~vQEfI~~g~DIRv~VVGg---~v 324 (422)
T 1pk8_A 257 KE---MLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALT------KTYATAEPFIDAKYDVRVQKIGQ---NY 324 (422)
T ss_dssp GG---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TSCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhcc------CceEEEEeecCCCceEEEEEECC---EE
Confidence 22 44568999999999999999999999999999888765443 37789999999778999999844 66
Q ss_pred EEEeeee--eeeccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCeEEEEEec--cCCCc
Q 009316 291 VHFGERD--CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVE 365 (537)
Q Consensus 291 v~~~~r~--~s~~~~~~k~~e~~P~~~l~~~~~~~l~~~a~~~~~al-g~~G~~~vEf~~~~~g~~~~lEiN~--R~~g~ 365 (537)
+.+..+. -.++. +..-....+.+ ++++ +.+.+.++.+++ |+ +++.||++.+++|.+|++|||. .+.
T Consensus 325 va~~Rr~~~g~Wrt-Nvg~g~~e~i~-lt~e----~~elA~kAaka~gGl-diaGVDlL~s~dG~~~VlEVN~s~~P~-- 395 (422)
T 1pk8_A 325 KAYMRTSVSGNWKT-NTGSAMLEQIA-MSDR----YKLWVDTCSEIFGGL-DICAVEALHGKDGRDHIIEVVGSSMPL-- 395 (422)
T ss_dssp EEEEEEESSSCSST-TSSCEEEEEEC-CCHH----HHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCCC--
T ss_pred EEEEEEcCCCCcee-ccCceeeeeeC-CCHH----HHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEECCCCCCC--
Confidence 6543332 12222 22222222333 5554 568889999999 66 8889999999889899999999 653
Q ss_pred ccchhhhcCCCHHHHHHHHH
Q 009316 366 HPVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 366 ~~~~e~~tGidl~~~~i~~a 385 (537)
..-++..++.|+.+..+...
T Consensus 396 ~~g~~~~~~~~IA~~ii~~i 415 (422)
T 1pk8_A 396 IGDHQDEDKQLIVELVVNKM 415 (422)
T ss_dssp CTTCHHHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHHHH
Confidence 33555667888888888765
No 67
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.73 E-value=5.6e-17 Score=166.73 Aligned_cols=227 Identities=11% Similarity=0.135 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCCc-ccc----
Q 009316 82 IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYGF-LAE---- 156 (537)
Q Consensus 82 ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~g~-lsE---- 156 (537)
+..++++++++.|++++.++. +..... + ...|+|++..+. ..|
T Consensus 34 ~~~~l~~al~~~G~~~~~iD~--~~~~~~------------------~------------~~~Dvvi~~l~~~~~ea~~~ 81 (346)
T 2q7d_A 34 NFQAFAELCRKRGMEVVQLNL--SRPIEE------------------Q------------GPLDVIIHKLTDVILEADQN 81 (346)
T ss_dssp THHHHHHHHHTTTCEEEECCT--TSCSGG------------------G------------CCCSEEEECCHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCcEEEEccc--ccchhh------------------c------------CCCCEEEeCCcccccccccC
Confidence 467899999999999998842 211100 0 357788876421 111
Q ss_pred ----cH--H-HHHHHH-HCCCceeCCCHHHHHHhcCHHHHHHHHHHc-------CCCCCCCCCcCCCC--HHHHHHHH--
Q 009316 157 ----NA--V-FVEMCR-EHGINFIGPNPDSIRIMGDKSTARETMKNA-------GVPTVPGSDGLLQS--TEEAVKLA-- 217 (537)
Q Consensus 157 ----~~--~-~a~~~e-~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~-------Gvpvp~~~~~~v~~--~~~~~~~~-- 217 (537)
.. . +.+... ..|++++ ++++++..+.||..+.+++.++ |||+|++ ..+.+ .+++.+..
T Consensus 82 d~~~~~~~~~l~~~~~~~~gv~vi-np~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t--~~~~~~~~~~~~~~~~~ 158 (346)
T 2q7d_A 82 DSQSLELVHRFQEYIDAHPETIVL-DPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPF--MELTSLCGDDTMRLLEK 158 (346)
T ss_dssp CHHHHHHHHHHHHHHHHCTTSEEE-SCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCE--EEECSCCCTTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCeEEc-CCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCE--EEEeCCCHHHHHHHHHh
Confidence 11 1 212211 2478877 7899999999999999999997 9999998 44444 23444443
Q ss_pred HhcCCcEEEeecCCCC--CcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccC-CcEEEEEEEEeCCCCEEEEe
Q 009316 218 DELGFPVMIKATAGGG--GRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-PRHIEFQVLADKYGNVVHFG 294 (537)
Q Consensus 218 ~~ig~PvvvKp~~g~g--g~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g-~~ei~v~v~~d~~G~vv~~~ 294 (537)
..+|||+|+||..|.| +.||.++.+.++|... +..+++||||+. ++++.|.|+++ +++...
T Consensus 159 ~~lg~P~VvKP~~g~Gs~s~~v~~v~~~~~l~~~-------------~~~~lvQefI~~~G~dirv~VvG~---~v~~~~ 222 (346)
T 2q7d_A 159 NGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAI-------------QPPCVVQNFINHNAVLYKVFVVGE---SYTVVQ 222 (346)
T ss_dssp TTCCSSEEEECSBCSSTTCCEEEEECSGGGTTC---------------CCEEEEECCCCTTEEEEEEEETT---EEEEEE
T ss_pred cCCCCCEEEEecCCCcceeeeeEEecCHHHHHhc-------------CCCEEEEEeeCCCCeEEEEEEECC---EEEEEE
Confidence 3578999999997643 6799999999988752 267999999982 38999988843 555542
Q ss_pred eeeeeecccc-----------ce---eEE---EcC-------CCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC-
Q 009316 295 ERDCSIQRRN-----------QK---LLE---EAP-------SPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE- 349 (537)
Q Consensus 295 ~r~~s~~~~~-----------~k---~~e---~~P-------~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~- 349 (537)
.+.....+-. .+ ... .+| +. +++ .+++.+.|.++.+++|+..+ .||++++.
T Consensus 223 r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~-~~~--~~el~~lA~~a~~alGl~~~-gvDii~~~~ 298 (346)
T 2q7d_A 223 RPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFE-RPS--DEVIRELSRALRQALGVSLF-GIDIIINNQ 298 (346)
T ss_dssp EECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCC-CCC--HHHHHHHHHHHHHHHCCCEE-EEEEEECTT
T ss_pred EecCCCcCcCccccccccccceeeccCCcccccccccccccccc-CCC--hHHHHHHHHHHHHHhCCceE-eeEEEeecC
Confidence 2211000000 00 000 111 11 222 56889999999999999866 59999985
Q ss_pred CCCeEEEEEeccCC
Q 009316 350 RGSFYFMEMNTRIQ 363 (537)
Q Consensus 350 ~g~~~~lEiN~R~~ 363 (537)
+|++|+||||+=++
T Consensus 299 ~g~~~VlEVN~~PG 312 (346)
T 2q7d_A 299 TGQHAVIDINAFPG 312 (346)
T ss_dssp TCCEEEEEEEESCC
T ss_pred CCCEEEEEEeCCcc
Confidence 67899999999664
No 68
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=4.4e-18 Score=144.77 Aligned_cols=104 Identities=45% Similarity=0.756 Sum_probs=91.3
Q ss_pred HHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHH
Q 009316 180 RIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAA 259 (537)
Q Consensus 180 ~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~ 259 (537)
..+.||..++++|+++|||+|+++...+.+.+++.++++++|||+|+||..|+||+|+.+++|.+|+.++++.+......
T Consensus 4 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~~ 83 (108)
T 2cqy_A 4 GSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAAS 83 (108)
T ss_dssp CCCCCCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHCSSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHh
Confidence 46789999999999999999998311678999999999999999999999999999999999999999999988765545
Q ss_pred hcCCCcEEEEecccCCcEEEEEEE
Q 009316 260 AFGNDGVYLEKYVQNPRHIEFQVL 283 (537)
Q Consensus 260 ~~g~~~vlvEe~I~g~~ei~v~v~ 283 (537)
.+++..++||+||+|.+|++|+++
T Consensus 84 ~~~~~~~lvee~i~g~~E~~v~v~ 107 (108)
T 2cqy_A 84 SFGDDRLLIEKFIDNPRHISGPSS 107 (108)
T ss_dssp HTSSCCEEEEECCSSSSCCCSCCC
T ss_pred hcCCCcEEEeeccCCCcEEEEEec
Confidence 566688999999999779988765
No 69
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=99.52 E-value=1.4e-14 Score=150.81 Aligned_cols=169 Identities=20% Similarity=0.290 Sum_probs=121.9
Q ss_pred CHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCC-cEEEeec--CCCCCcc---------eEEeCCHHHHHHHHH
Q 009316 184 DKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGF-PVMIKAT--AGGGGRG---------MRLAKEPDEFVKLLQ 251 (537)
Q Consensus 184 dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~-PvvvKp~--~g~gg~G---------v~~v~~~~el~~~~~ 251 (537)
+++.+|++|+++|||+|++ ..+.+.+++.++++++|| |+||||. .|+.|+| |++++|.+|+.++++
T Consensus 4 ~E~~aK~lL~~~GIpvp~~--~~~~s~~ea~~~a~~lg~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a~~ 81 (395)
T 2fp4_B 4 QEYQSKKLMSDNGVKVQRF--FVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAK 81 (395)
T ss_dssp CHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcCCCCe--EEECCHHHHHHHHHHcCCCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHHHH
Confidence 6789999999999999999 788999999999999999 8999995 5555554 999999999999998
Q ss_pred HHHHHHH--Hhc---C--CCcEEEEecccCCcEEEEEEEEeCC-C-CEEEEe-eeeeeecc----ccceeEEEc--CCCC
Q 009316 252 QAKSEAA--AAF---G--NDGVYLEKYVQNPRHIEFQVLADKY-G-NVVHFG-ERDCSIQR----RNQKLLEEA--PSPA 315 (537)
Q Consensus 252 ~~~~~~~--~~~---g--~~~vlvEe~I~g~~ei~v~v~~d~~-G-~vv~~~-~r~~s~~~----~~~k~~e~~--P~~~ 315 (537)
++..... ..+ + ...++||+|++.++|+.+.++.|+. | .++.++ +..+.+.. ...++.... |...
T Consensus 82 ~~l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~~~~pvi~~s~~GG~~iE~va~~~~d~i~~~~idp~~~ 161 (395)
T 2fp4_B 82 QMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEG 161 (395)
T ss_dssp TTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECCTTTC
T ss_pred HHhhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccccCceEEEEECCCCccceeccccCCceEEEEecCCCCC
Confidence 7654310 011 1 2479999999966999999999985 3 566666 33343331 133444433 4444
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCcceeEE----------EEEEeCCCCeEEEEEeccCC
Q 009316 316 LTPELRKAMGDAAVAAAASIGYIGVGTV----------EFLLDERGSFYFMEMNTRIQ 363 (537)
Q Consensus 316 l~~~~~~~l~~~a~~~~~alg~~G~~~v----------Ef~~~~~g~~~~lEiN~R~~ 363 (537)
+++ ..+.++++.+|+.+...- +++. +. +++++||||++-
T Consensus 162 l~~-------~~a~~l~~~lg~~~~~~~~~~~~l~~l~~l~~-~~-d~~~lEINPl~~ 210 (395)
T 2fp4_B 162 IKD-------SQAQRMAENLGFLGPLQNQAADQIKKLYNLFL-KI-DATQVEVNPFGE 210 (395)
T ss_dssp CCH-------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH-HT-TEEEEEEEEEEE
T ss_pred CCH-------HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhh-hC-CeEEEEeeeEEE
Confidence 666 446777778888753211 1122 23 499999999984
No 70
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=99.51 E-value=9.3e-15 Score=143.76 Aligned_cols=202 Identities=13% Similarity=0.105 Sum_probs=136.6
Q ss_pred CCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCH------------H
Q 009316 144 CTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQST------------E 211 (537)
Q Consensus 144 ~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~------------~ 211 (537)
||.+++-|+.-.-.....+.++..+...+ ++..++..+.||..+.++|+++|||+|++. .+... +
T Consensus 58 ~d~lisf~s~gfpl~kai~y~~lr~p~~I-Nd~~~q~~~~DK~~~~~iL~~~gIPtP~t~--~~~rd~~~~~~~~~~e~~ 134 (330)
T 3t7a_A 58 CDCLISFHSKGFPLDKAVAYAKLRNPFVI-NDLNMQYLIQDRREVYSILQAEGILLPRYA--ILNRDPNNPKECNLIEGE 134 (330)
T ss_dssp CSEEEECCCTTCCHHHHHHHHHHHCCEES-BCSTHHHHHTBHHHHHHHHHHTTCCCCCEE--EECCBTTBGGGSSEEECS
T ss_pred CCEEEEeccCCCcHHHHHHHHHHhCCcee-CCHHHHHHHHHHHHHHHHHHHcCCCCCCEE--EEeCCCCCccccceeccc
Confidence 77777754211112245566676676555 899999999999999999999999999984 33321 1
Q ss_pred HHHH-HHHhcCCcEEEeecCCC-----------CC----cceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccC-
Q 009316 212 EAVK-LADELGFPVMIKATAGG-----------GG----RGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN- 274 (537)
Q Consensus 212 ~~~~-~~~~ig~PvvvKp~~g~-----------gg----~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g- 274 (537)
+..+ ..+.+++|+|+||..|. .| +-++++.|.+.....-... -.+..+++||||+.
T Consensus 135 d~i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~v-------r~~~~~i~QEFI~~~ 207 (330)
T 3t7a_A 135 DHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNV-------RKTGSYIYEEFMPTD 207 (330)
T ss_dssp SEEEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSC-------CSSSCEEEEECCCCS
T ss_pred hhhhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhh-------ccCCcEEEEeccCCC
Confidence 1111 23567899999999995 22 3344566544321000000 12578999999973
Q ss_pred CcEEEEEEEEeCCCCEEEEeeeeee----eccccceeEEE-cCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC
Q 009316 275 PRHIEFQVLADKYGNVVHFGERDCS----IQRRNQKLLEE-APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE 349 (537)
Q Consensus 275 ~~ei~v~v~~d~~G~vv~~~~r~~s----~~~~~~k~~e~-~P~~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~ 349 (537)
++++.+-++++ ++++...|... ..+++..-.+. .|.. ++++++ +.|.++++++|. .++.||++.+.
T Consensus 208 G~DIRv~vVG~---~vv~Am~R~sp~~~G~~r~N~~gG~~~~~v~-Lt~eek----~iA~kaa~a~G~-~v~GVDlLrs~ 278 (330)
T 3t7a_A 208 GTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEVRYPVI-LNAREK----LIAWKVCLAFKQ-TVCGFDLLRAN 278 (330)
T ss_dssp SEEEEEEEEST---TCEEEEEEECTTSSCBCCBCTTSCBCCEECC-CCHHHH----HHHHHHHHHTTB-SEEEEEEEEET
T ss_pred CceEEEEEECC---EEEEEEEEeCCCCCCcEEEcCCCCceeeeec-CCHHHH----HHHHHHHHHhCC-ceEEEEEEEEC
Confidence 48999988854 77887777542 23444333332 2443 777554 889999999998 88889999987
Q ss_pred CCCeEEEEEeccCCCc
Q 009316 350 RGSFYFMEMNTRIQVE 365 (537)
Q Consensus 350 ~g~~~~lEiN~R~~g~ 365 (537)
+| .|++|+|.++.+.
T Consensus 279 ~~-~~V~EVNg~~fvk 293 (330)
T 3t7a_A 279 GQ-SYVCDVNGFSFVK 293 (330)
T ss_dssp TE-EEEEEEEESCCCS
T ss_pred Cc-cEEEEeCCCcccc
Confidence 66 9999999999775
No 71
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=99.51 E-value=1.8e-14 Score=149.95 Aligned_cols=171 Identities=15% Similarity=0.233 Sum_probs=121.3
Q ss_pred cCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCc-EEEeecCCCCCc----ceEEeCCHHHHHHHHHHHHHHH
Q 009316 183 GDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFP-VMIKATAGGGGR----GMRLAKEPDEFVKLLQQAKSEA 257 (537)
Q Consensus 183 ~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~P-vvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~ 257 (537)
-+++.+|++|+++|||+|++ ..+.+.+++.++++++||| +||||..+.||+ ||+++++.+|+.++++++....
T Consensus 3 l~E~~aK~lL~~~GIpvp~~--~~~~s~eea~~aa~~lG~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~~ 80 (388)
T 2nu8_B 3 LHEYQAKQLFARYGLPAPVG--YACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKR 80 (388)
T ss_dssp CCHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSE
T ss_pred CCHHHHHHHHHHCCcCCCCe--eEECCHHHHHHHHHHhCCCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhhh
Confidence 37899999999999999999 7889999999999999999 999999875544 9999999999999998875421
Q ss_pred H-------HhcCCCcEEEEecccCCcEEEEEEEEeCC-C-CEEEEe-ee--eee-ecccc-ceeEE--EcCCCCCCHHHH
Q 009316 258 A-------AAFGNDGVYLEKYVQNPRHIEFQVLADKY-G-NVVHFG-ER--DCS-IQRRN-QKLLE--EAPSPALTPELR 321 (537)
Q Consensus 258 ~-------~~~g~~~vlvEe~I~g~~ei~v~v~~d~~-G-~vv~~~-~r--~~s-~~~~~-~k~~e--~~P~~~l~~~~~ 321 (537)
. .......++||+|+++.+|+.+.++.|+. | .++.++ +- ++. +..++ .++.. ..|+..+++...
T Consensus 81 ~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~~g~pvi~~~~~GGv~iE~v~~~~pd~i~~~~i~P~~gl~~~~a 160 (388)
T 2nu8_B 81 LVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG 160 (388)
T ss_dssp ECCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECBTTTBCCHHHH
T ss_pred hhccccCCCCcccceEEEEEccccCCcEEEEEEEecccCCcEEEEeCCCCcchhhccccCCceEEEEecCCCCCCCHHHH
Confidence 0 00113579999999966999999999986 3 666665 21 211 12211 33444 556555777654
Q ss_pred HHHHHHHHHHHHHcCCcceeE---E-------EEEEeCCCCeEEEEEeccCCC
Q 009316 322 KAMGDAAVAAAASIGYIGVGT---V-------EFLLDERGSFYFMEMNTRIQV 364 (537)
Q Consensus 322 ~~l~~~a~~~~~alg~~G~~~---v-------Ef~~~~~g~~~~lEiN~R~~g 364 (537)
.++++.+|+.+... . +++.+ . +++++||||++..
T Consensus 161 -------~~~~~~lG~~~~~~~~~~~~l~~l~~~~~~-~-d~~~lEINPl~~~ 204 (388)
T 2nu8_B 161 -------RELAFKLGLEGKLVQQFTKIFMGLATIFLE-R-DLALIEINPLVIT 204 (388)
T ss_dssp -------HHHHHHTTCCTHHHHHHHHHHHHHHHHHHH-T-TEEEEEEEEEEEE
T ss_pred -------HHHHHHcCCCHHHHHHHHHHHHHHHHHHHh-C-CEEEEEecceEEc
Confidence 44444567664210 0 12222 3 4999999999843
No 72
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=99.21 E-value=8.4e-11 Score=122.57 Aligned_cols=109 Identities=28% Similarity=0.385 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCCCc----ceEEeCCHHHHHHHHHHHHHHHHH
Q 009316 184 DKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGR----GMRLAKEPDEFVKLLQQAKSEAAA 259 (537)
Q Consensus 184 dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~~ 259 (537)
+-+.+|++|+++|||+|++ ..+.+.+++.++++++|||+||||....||+ ||+++++.+|+.++++++......
T Consensus 4 ~E~~aK~lL~~~GIpvp~~--~~~~s~eea~~aa~~lG~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~~~ 81 (397)
T 3ufx_B 4 HEYQAKEILARYGVPVPPG--KVAYTPEEAKRIAEEFGKRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMNIK 81 (397)
T ss_dssp CHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHTSCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCEET
T ss_pred CHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhhcc
Confidence 4578999999999999999 7899999999999999999999999855555 999999999999999887542111
Q ss_pred hcCCCcEEEEecccCCcEEEEEEEEeCC-C-CEEEEe
Q 009316 260 AFGNDGVYLEKYVQNPRHIEFQVLADKY-G-NVVHFG 294 (537)
Q Consensus 260 ~~g~~~vlvEe~I~g~~ei~v~v~~d~~-G-~vv~~~ 294 (537)
.+....+++|+|++..+|+.+.++.|.. | .++.++
T Consensus 82 g~~~~~vlVEe~v~~g~El~vgv~~D~~~g~pvi~~s 118 (397)
T 3ufx_B 82 GLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLMLS 118 (397)
T ss_dssp TEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEE
T ss_pred CCccceEEEEEeecCCeeEEEEEEecCCCCCcEEEEe
Confidence 1224689999999955999999999975 4 455553
No 73
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=98.00 E-value=0.0002 Score=73.48 Aligned_cols=158 Identities=18% Similarity=0.301 Sum_probs=92.6
Q ss_pred cCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccC-------Cc--EEEEEEEEeCCCCE
Q 009316 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-------PR--HIEFQVLADKYGNV 290 (537)
Q Consensus 220 ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g-------~~--ei~v~v~~d~~G~v 290 (537)
-+.++|+||..|+.|+|++++++.+++.+.++.. ...++||+||+. ++ ++.+-|+....-.+
T Consensus 146 ~~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~---------~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvts~l~v 216 (380)
T 3tig_A 146 EGNVWIAKSSSGAKGEGILISSDATELLDFIDNQ---------GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDNQYNI 216 (380)
T ss_dssp CCCCEEEEESCC----CCBCCSCSHHHHHHHHHH---------TSCEEEEECCSSBCCBTTTTBCEEEEEEEEECTTCCE
T ss_pred CCCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc---------CCcEEEEecccCceeecCCCceeEEEEEEEEcCCCEE
Confidence 3678999999999999999999999998876531 368999999963 23 66777666542222
Q ss_pred EEEe---eeeee-------------------eccccce-eE---EEcC--------------CCCCCHHHHHHHHHHHHH
Q 009316 291 VHFG---ERDCS-------------------IQRRNQK-LL---EEAP--------------SPALTPELRKAMGDAAVA 330 (537)
Q Consensus 291 v~~~---~r~~s-------------------~~~~~~k-~~---e~~P--------------~~~l~~~~~~~l~~~a~~ 330 (537)
..+- .|-|+ +|..+.. .. +..- .......+..+|.+....
T Consensus 217 y~y~~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~~~~g~~~~~~~f~~yL~~~~~~~~~~~i~~~I~~ii~~ 296 (380)
T 3tig_A 217 YLYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEGNEMFFEEFNQYLVTSLNINLENSILCQIKEIIRV 296 (380)
T ss_dssp EECSCCEEEECC----------------------------------CCBCHHHHHHHHSTTSSCCHHHHTHHHHHHHHHH
T ss_pred EEEcCCEEEecCCCcCccchhhhhhhccccccccccccccccccCCCcCcHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 2110 12221 1111100 00 0000 000113455666666665
Q ss_pred HHHH----c-----CCc--ceeEEEEEEeCCCCeEEEEEeccCCCcccchhhhcCCCHHHHHHHHHcCCCCC
Q 009316 331 AAAS----I-----GYI--GVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLR 391 (537)
Q Consensus 331 ~~~a----l-----g~~--G~~~vEf~~~~~g~~~~lEiN~R~~g~~~~~e~~tGidl~~~~i~~a~G~~l~ 391 (537)
.+.+ + .+. ....+||++|++.++++||||..++-...++ -++++..++++..--++
T Consensus 297 ~l~a~~~~i~~~~~~~~~FEl~G~D~lid~~l~~wllEVN~~P~~~q~~i-----~~l~~~~~~iavdp~f~ 363 (380)
T 3tig_A 297 CLSCLEPAISTKYLPYHSFQLFGFDFMVDKNLKVWLIEVNGAPACAQKLY-----AELCKGIVDLAISSVFP 363 (380)
T ss_dssp HHHHHHHHHCCTTSSSEECEEEEEEEEEBTTCCEEEEEEESSCCCCTTTH-----HHHHHHHHHHTTTTTSC
T ss_pred HHHHHHHHhhhcccCCceEEEEeEEEEEcCCCcEEEEEEeCCCCccHHhH-----HHHHHHHHHHhcccccC
Confidence 5544 2 122 5788999999999999999999996543222 23688888888765443
No 74
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=97.36 E-value=0.00022 Score=74.49 Aligned_cols=108 Identities=12% Similarity=0.004 Sum_probs=78.7
Q ss_pred HHHHHHHHHHcCC---C-CCC--CCCcCC---CCHHHHHHHHHhcC-CcEEEeecCCCC----CcceEEeCCHHHHHHHH
Q 009316 185 KSTARETMKNAGV---P-TVP--GSDGLL---QSTEEAVKLADELG-FPVMIKATAGGG----GRGMRLAKEPDEFVKLL 250 (537)
Q Consensus 185 K~~~r~~l~~~Gv---p-vp~--~~~~~v---~~~~~~~~~~~~ig-~PvvvKp~~g~g----g~Gv~~v~~~~el~~~~ 250 (537)
-+..|+++.++++ | +.+ + ..+ .|.+++.+.++.+| ||+|+|+-.-.| +-||++..+.+|+.+++
T Consensus 8 Ey~~K~ll~~~~~~~~~~~~~~~~--~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa 85 (425)
T 3mwd_A 8 EQTGKELLYKFICTTSAIQNRFKY--ARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWL 85 (425)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCC--EEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhccccCCccCCcce--EEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHH
Confidence 3678899999999 4 222 2 233 45689999999999 999999966322 24799999999999988
Q ss_pred HHHHHHHHHh----cCCCcEEEEecccC--CcEEEEEEEEeCCCCEEEEe
Q 009316 251 QQAKSEAAAA----FGNDGVYLEKYVQN--PRHIEFQVLADKYGNVVHFG 294 (537)
Q Consensus 251 ~~~~~~~~~~----~g~~~vlvEe~I~g--~~ei~v~v~~d~~G~vv~~~ 294 (537)
+++....... -.-..++||++++. .+|+-+.+..|..|.++.++
T Consensus 86 ~~ml~~~~~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~gpvI~~s 135 (425)
T 3mwd_A 86 KPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (425)
T ss_dssp TTTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHHhhhhhccCCCceEEEEEEEecccCCCCceEEEEEEecCCCCEEEEE
Confidence 7765322100 00136999999975 48999999999988887775
No 75
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=97.14 E-value=0.00038 Score=78.08 Aligned_cols=108 Identities=13% Similarity=0.046 Sum_probs=79.9
Q ss_pred HHHHHHHHHHcCCC------CCCCCCcCCC---CHHHHHHHHHhcC-CcEEEeecCCCCCc----ceEEeCCHHHHHHHH
Q 009316 185 KSTARETMKNAGVP------TVPGSDGLLQ---STEEAVKLADELG-FPVMIKATAGGGGR----GMRLAKEPDEFVKLL 250 (537)
Q Consensus 185 K~~~r~~l~~~Gvp------vp~~~~~~v~---~~~~~~~~~~~ig-~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~ 250 (537)
-+..|+++.++++| .+++ ..++ +.+++.+.++.+| +|+|+|+-.-.||| ||++..|.+|+.+++
T Consensus 8 Ey~aK~ll~~~~~~~~~~~~~~~~--~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~aa 85 (829)
T 3pff_A 8 EQTGKELLYKFICTTSAIQNRFKY--ARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWL 85 (829)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCC--EEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhCccccccccCCce--EEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHHH
Confidence 46789999999998 3344 3333 4588888888888 99999996655443 699999999999988
Q ss_pred HHHHHHHHH-hc---CCCcEEEEecccC--CcEEEEEEEEeCCCCEEEEe
Q 009316 251 QQAKSEAAA-AF---GNDGVYLEKYVQN--PRHIEFQVLADKYGNVVHFG 294 (537)
Q Consensus 251 ~~~~~~~~~-~~---g~~~vlvEe~I~g--~~ei~v~v~~d~~G~vv~~~ 294 (537)
+++...... .. .-..++||++++. .+|+-+.+..|..|.++.++
T Consensus 86 ~~iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~gpvIm~s 135 (829)
T 3pff_A 86 KPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (829)
T ss_dssp TTTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCCCCEEEEE
Confidence 776532211 00 0136999999974 48999999999988888775
No 76
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.32 E-value=0.013 Score=48.68 Aligned_cols=94 Identities=10% Similarity=0.092 Sum_probs=61.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcC-CcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~G-i~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
|+++|+|+|.|.++..+++.+.+.| +++++++.+.+.........-..+.. ++.+.+.+.++.+ ++|.|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-------d~~~~~~~~~~~~--~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQV-------DAKDEAGLAKALG--GFDAVI 74 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEEC-------CTTCHHHHHHHTT--TCSEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEe-------cCCCHHHHHHHHc--CCCEEE
Confidence 4679999999999999999999999 88877754332111111111123332 3556677766653 799988
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
-..++. ....+.+.+.+.|..++-
T Consensus 75 ~~~~~~-~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 75 SAAPFF-LTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp ECSCGG-GHHHHHHHHHHTTCEEEC
T ss_pred ECCCch-hhHHHHHHHHHhCCCEEE
Confidence 766543 235677777888887653
No 77
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.26 E-value=0.064 Score=53.85 Aligned_cols=94 Identities=13% Similarity=0.035 Sum_probs=65.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-------ccCEEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-------LADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-------~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~ 142 (537)
.++|||.|. |.++..+++.+.+.|++++++....+....... .--+.+.. ++.|.+.+.++.++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~-------Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYG-------LINEQEAMEKILKEH 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEe-------ecCCHHHHHHHHhhC
Confidence 468999996 999999999999999999998765432211111 11233332 477899999999888
Q ss_pred CCCEEEeCCCcccc--cHHHHHHHHHCC-Cce
Q 009316 143 GCTMLHPGYGFLAE--NAVFVEMCREHG-INF 171 (537)
Q Consensus 143 ~~d~V~pg~g~lsE--~~~~a~~~e~~G-l~~ 171 (537)
++|+|+-..+...- ...+.+++.+.| +..
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~ 114 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKR 114 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSE
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHcCCceE
Confidence 99999876654211 145667777777 643
No 78
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.06 E-value=0.0083 Score=52.15 Aligned_cols=91 Identities=14% Similarity=-0.013 Sum_probs=55.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
++++|+|+|.|.++..+++.+.+.|+++++++.+++.........-..+. + +..+.+.+.++ ...++|+|+-
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~-g------d~~~~~~l~~~-~~~~~d~vi~ 76 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVI-A------DPTDESFYRSL-DLEGVSAVLI 76 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-C------CTTCHHHHHHS-CCTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEE-C------CCCCHHHHHhC-CcccCCEEEE
Confidence 35789999999999999999999999999996544321111111112232 2 23444444333 2346899887
Q ss_pred CCCcccccHHHHHHHHHCC
Q 009316 150 GYGFLAENAVFVEMCREHG 168 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~G 168 (537)
..+....+......+++.|
T Consensus 77 ~~~~~~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 77 TGSDDEFNLKILKALRSVS 95 (141)
T ss_dssp CCSCHHHHHHHHHHHHHHC
T ss_pred ecCCHHHHHHHHHHHHHhC
Confidence 7664334445555555555
No 79
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.91 E-value=0.007 Score=52.87 Aligned_cols=118 Identities=12% Similarity=0.014 Sum_probs=68.0
Q ss_pred CCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 68 ~~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
..+.++|+|+|.|.++..+++.+++.|+++++++.+++........ +..+..+ +..+.+.+.+ +.-.++|+|
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-g~~~i~g------d~~~~~~l~~-a~i~~ad~v 75 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-GVRAVLG------NAANEEIMQL-AHLECAKWL 75 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEES------CTTSHHHHHH-TTGGGCSEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-CCCEEEC------CCCCHHHHHh-cCcccCCEE
Confidence 3456789999999999999999999999999996554432211221 2223233 2334444333 333568988
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCC
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
+-..+...++......+.+.+ |....+.+..|.... +.+++.|+..
T Consensus 76 i~~~~~~~~n~~~~~~a~~~~-----~~~~iiar~~~~~~~-~~l~~~G~d~ 121 (140)
T 3fwz_A 76 ILTIPNGYEAGEIVASARAKN-----PDIEIIARAHYDDEV-AYITERGANQ 121 (140)
T ss_dssp EECCSCHHHHHHHHHHHHHHC-----SSSEEEEEESSHHHH-HHHHHTTCSE
T ss_pred EEECCChHHHHHHHHHHHHHC-----CCCeEEEEECCHHHH-HHHHHCCCCE
Confidence 876654334433334444331 122223344454443 4567788763
No 80
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.40 E-value=0.029 Score=48.23 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=53.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
++++|+|+|.|.++..+++.+.+.|+++++++.+.+............+. + +..+.+.+.++ .-.++|.|+-
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~-~------d~~~~~~l~~~-~~~~~d~vi~ 76 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVI-A------NATEENELLSL-GIRNFEYVIV 76 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEE-C------CTTCHHHHHTT-TGGGCSEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEE-e------CCCCHHHHHhc-CCCCCCEEEE
Confidence 35789999999999999999999999998886433211111111122232 2 23444444332 1246899987
Q ss_pred CCCcc-cccHHHHHHHHHCC
Q 009316 150 GYGFL-AENAVFVEMCREHG 168 (537)
Q Consensus 150 g~g~l-sE~~~~a~~~e~~G 168 (537)
..+.. ..+......+.+.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~ 96 (144)
T 2hmt_A 77 AIGANIQASTLTTLLLKELD 96 (144)
T ss_dssp CCCSCHHHHHHHHHHHHHTT
T ss_pred CCCCchHHHHHHHHHHHHcC
Confidence 66542 22334445555554
No 81
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.21 E-value=0.18 Score=49.79 Aligned_cols=121 Identities=16% Similarity=0.218 Sum_probs=76.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hc--c-CEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL--A-DESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~--a-d~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
|+++|||.|. |.++..+++.+.+.|++++++..+.+...... .+ . -+.+.. ++.|.+.+.++.+ ++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~-------Dl~d~~~l~~a~~--~~ 80 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKG-------ELDEHEKLVELMK--KV 80 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHT--TC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEe-------cCCCHHHHHHHHc--CC
Confidence 4568999995 99999999999999999999876543111110 01 1 133332 4778888888774 69
Q ss_pred CEEEeCCCccc-c-cHHHHHHHHHCC-Cc-ee----CCC-------HHHHHHhcCHHHHHHHHHHcCCCC
Q 009316 145 TMLHPGYGFLA-E-NAVFVEMCREHG-IN-FI----GPN-------PDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 145 d~V~pg~g~ls-E-~~~~a~~~e~~G-l~-~i----Gp~-------~~~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
|+|+-..+... + ...+.+++.+.| +. |+ |.. .........|..+.+++++.|+++
T Consensus 81 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 150 (318)
T 2r6j_A 81 DVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPY 150 (318)
T ss_dssp SEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred CEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCe
Confidence 99886655321 1 235667777777 53 33 211 001122256777888888888775
No 82
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.21 E-value=0.25 Score=44.92 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=48.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
++|||.|. |.++..+++.+.+.|++++++..+.+.........-+.+.. +..+.+.+.++.+ ++|.|+-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~--~~d~vi~~ 74 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVG-------DVLQAADVDKTVA--GQDAVIVL 74 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEES-------CTTSHHHHHHHHT--TCSEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEe-------cCCCHHHHHHHHc--CCCEEEEC
Confidence 68999996 99999999999999999999875443221100000122222 3567777777764 58988765
Q ss_pred CCc
Q 009316 151 YGF 153 (537)
Q Consensus 151 ~g~ 153 (537)
-|.
T Consensus 75 a~~ 77 (206)
T 1hdo_A 75 LGT 77 (206)
T ss_dssp CCC
T ss_pred ccC
Confidence 443
No 83
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.16 E-value=0.15 Score=43.57 Aligned_cols=99 Identities=14% Similarity=-0.022 Sum_probs=67.1
Q ss_pred CCEEEEEcCcH----HHHHHHHHHHHcCCcEEEEecCCCCCC---chhhc-----cCEEEEcCCCCCCCCCCCHHHHHHH
Q 009316 71 QEKILVANRGE----IAVRVIRTAHEMGIPCVAVYSTIDKDA---LHVKL-----ADESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 71 ~~~iLI~~~g~----ia~~ii~aa~~~Gi~~v~v~~~~d~~~---~~~~~-----ad~~~~i~~~~~~~sy~~~~~i~~~ 138 (537)
.++|.|+|.+. .+.++++.+++.|++++.|....+... .+.++ .|-++..-+ ......+++.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p------~~~v~~~v~e 77 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYIN------PQNQLSEYNY 77 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSC------HHHHGGGHHH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeC------HHHHHHHHHH
Confidence 47899999654 589999999999999999965433110 01111 344443211 1223455666
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHH
Q 009316 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPD 177 (537)
Q Consensus 139 a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~ 177 (537)
|.+.++.+|+-..|| ++.++.+.+++.|+.++|+..-
T Consensus 78 ~~~~g~k~v~~~~G~--~~~e~~~~a~~~Girvv~nC~g 114 (122)
T 3ff4_A 78 ILSLKPKRVIFNPGT--ENEELEEILSENGIEPVIGCTL 114 (122)
T ss_dssp HHHHCCSEEEECTTC--CCHHHHHHHHHTTCEEEESCHH
T ss_pred HHhcCCCEEEECCCC--ChHHHHHHHHHcCCeEECCcCe
Confidence 667788899988888 5678999999999999975443
No 84
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.98 E-value=0.15 Score=47.50 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=58.6
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHH-HcCCcEEEEecCCC-CCCchh-hccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009316 69 CRQEKILVAN-RGEIAVRVIRTAH-EMGIPCVAVYSTID-KDALHV-KLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 69 ~~~~~iLI~~-~g~ia~~ii~aa~-~~Gi~~v~v~~~~d-~~~~~~-~~ad-~~~~i~~~~~~~sy~~~~~i~~~a~~~~ 143 (537)
+|+|+|||.| .|.++..+++.+. +.|++++++..+.+ ...... .... ..+.. +..|.+.+.++.+ +
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~ 73 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEG-------SFQNPGXLEQAVT--N 73 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEEC-------CTTCHHHHHHHHT--T
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEEC-------CCCCHHHHHHHHc--C
Confidence 4567899999 5999999999999 89999999865443 221110 1111 22222 4667788877774 6
Q ss_pred CCEEEeCCCccc-ccHHHHHHHHHCCC
Q 009316 144 CTMLHPGYGFLA-ENAVFVEMCREHGI 169 (537)
Q Consensus 144 ~d~V~pg~g~ls-E~~~~a~~~e~~Gl 169 (537)
+|.|+-.-|... +...+.+.+.+.|.
T Consensus 74 ~d~vv~~ag~~n~~~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 74 AEVVFVGAMESGSDMASIVKALSRXNI 100 (221)
T ss_dssp CSEEEESCCCCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCChhHHHHHHHHHhcCC
Confidence 899886655310 12345556666665
No 85
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=94.90 E-value=0.19 Score=44.07 Aligned_cols=100 Identities=18% Similarity=0.170 Sum_probs=65.3
Q ss_pred CEEEEEcC----cHHHHHHHHHHHHcCCcEEEEecCC--CCC-------Cch--hhccCEEEEcCCCCCCCCCCCHHHHH
Q 009316 72 EKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTI--DKD-------ALH--VKLADESVCIGEAPSSQSYLLIPNVL 136 (537)
Q Consensus 72 ~~iLI~~~----g~ia~~ii~aa~~~Gi~~v~v~~~~--d~~-------~~~--~~~ad~~~~i~~~~~~~sy~~~~~i~ 136 (537)
++|.|+|. |..+..+++.+++.|++++.++... +.. +.. ..-+|-.+..-| ......++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp------~~~v~~v~ 87 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN------SEAAWGVA 87 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC------STHHHHHH
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC------HHHHHHHH
Confidence 67999998 6789999999999999988775443 100 000 011333332211 13455666
Q ss_pred HHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q 009316 137 SAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSI 179 (537)
Q Consensus 137 ~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i 179 (537)
+.+.+.++..|+-..+. ...++++.+++.|+.++||+---+
T Consensus 88 ~~~~~~g~~~i~i~~~~--~~~~l~~~a~~~Gi~~igpnc~g~ 128 (145)
T 2duw_A 88 QEAIAIGAKTLWLQLGV--INEQAAVLAREAGLSVVMDRCPAI 128 (145)
T ss_dssp HHHHHHTCCEEECCTTC--CCHHHHHHHHTTTCEEECSCCHHH
T ss_pred HHHHHcCCCEEEEcCCh--HHHHHHHHHHHcCCEEEcCCeeeE
Confidence 65666788888765443 356788899999999999875444
No 86
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=94.75 E-value=0.12 Score=44.54 Aligned_cols=95 Identities=12% Similarity=0.147 Sum_probs=62.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
.++++|+|.|..+..+++.+++. |++++.+..+ +.......+....+ +. .+.+.++++++++|.|+-
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~-~~~~~g~~i~g~pV----------~g-~~~l~~~~~~~~id~vii 71 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD-DRKKHKTTMQGITI----------YR-PKYLERLIKKHCISTVLL 71 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS-CGGGTTCEETTEEE----------EC-GGGHHHHHHHHTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC-CcccCCCEecCeEE----------EC-HHHHHHHHHHCCCCEEEE
Confidence 47899999999999999999876 8998877632 22111112223222 12 456778888889998876
Q ss_pred CCCcccc--cHHHHHHHHHCCCce-eCCCHH
Q 009316 150 GYGFLAE--NAVFVEMCREHGINF-IGPNPD 177 (537)
Q Consensus 150 g~g~lsE--~~~~a~~~e~~Gl~~-iGp~~~ 177 (537)
..+..+. ...+.+.|++.|+.+ +-|+..
T Consensus 72 a~~~~~~~~~~~i~~~l~~~gv~v~~vP~~~ 102 (141)
T 3nkl_A 72 AVPSASQVQKKVIIESLAKLHVEVLTIPNLD 102 (141)
T ss_dssp CCTTSCHHHHHHHHHHHHTTTCEEEECCCHH
T ss_pred eCCCCCHHHHHHHHHHHHHcCCeEEECCCHH
Confidence 6543221 146777888899875 445543
No 87
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=94.63 E-value=0.23 Score=43.48 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=65.8
Q ss_pred CEEEEEcC----cHHHHHHHHHHHHcCCcEEEEecCCCCC--C-ch---hh---ccCEEEEcCCCCCCCCCCCHHHHHHH
Q 009316 72 EKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTIDKD--A-LH---VK---LADESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 72 ~~iLI~~~----g~ia~~ii~aa~~~Gi~~v~v~~~~d~~--~-~~---~~---~ad~~~~i~~~~~~~sy~~~~~i~~~ 138 (537)
++|.|+|. |..+.++++.+++.|++++.++...+.. . .+ .. -.|-.+..-+ ......+++.
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp------~~~~~~vv~~ 96 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVK------PKLTMEYVEQ 96 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSC------HHHHHHHHHH
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeC------HHHHHHHHHH
Confidence 68999998 5679999999999999977775432110 0 00 01 1333332211 1234556666
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q 009316 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSI 179 (537)
Q Consensus 139 a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i 179 (537)
+.+.++..++-..|+ +..++.+.+++.|++++||+---+
T Consensus 97 ~~~~gi~~i~~~~g~--~~~~l~~~a~~~Gi~vvGpnc~gv 135 (144)
T 2d59_A 97 AIKKGAKVVWFQYNT--YNREASKKADEAGLIIVANRCMMR 135 (144)
T ss_dssp HHHHTCSEEEECTTC--CCHHHHHHHHHTTCEEEESCCHHH
T ss_pred HHHcCCCEEEECCCc--hHHHHHHHHHHcCCEEEcCCchhh
Confidence 667888888866665 356888999999999999875444
No 88
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=94.52 E-value=0.25 Score=42.92 Aligned_cols=102 Identities=15% Similarity=0.105 Sum_probs=65.8
Q ss_pred CCEEEEEcC----cHHHHHHHHHHHHcCCcEEEEecCCCCC-------Cch--hhccCEEEEcCCCCCCCCCCCHHHHHH
Q 009316 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTIDKD-------ALH--VKLADESVCIGEAPSSQSYLLIPNVLS 137 (537)
Q Consensus 71 ~~~iLI~~~----g~ia~~ii~aa~~~Gi~~v~v~~~~d~~-------~~~--~~~ad~~~~i~~~~~~~sy~~~~~i~~ 137 (537)
.++|.|+|. |..+..+++.+++.|++++.++...+.. +.. ..-+|-.+..-| .....++++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp------~~~v~~v~~ 87 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP------PKVGLQVAK 87 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC------HHHHHHHHH
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC------HHHHHHHHH
Confidence 468999998 8899999999999999977775432210 000 011343333211 123445555
Q ss_pred HHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHH
Q 009316 138 AAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIR 180 (537)
Q Consensus 138 ~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~ 180 (537)
.+.+.++..++...+. +..++++.+++.|+.++||+---+.
T Consensus 88 ~~~~~g~~~i~~~~~~--~~~~l~~~a~~~Gi~~igpnc~g~~ 128 (138)
T 1y81_A 88 EAVEAGFKKLWFQPGA--ESEEIRRFLEKAGVEYSFGRCIMVE 128 (138)
T ss_dssp HHHHTTCCEEEECTTS--CCHHHHHHHHHHTCEEECSCCHHHH
T ss_pred HHHHcCCCEEEEcCcc--HHHHHHHHHHHCCCEEEcCCcceEE
Confidence 5556788888765544 4567888899999999998744443
No 89
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.23 E-value=0.22 Score=43.81 Aligned_cols=88 Identities=13% Similarity=-0.001 Sum_probs=52.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
.++|+|+|.|.++..+++.+++.|++++++..+++...... ...-..+. + +..+.+.+.+. .-.++|+|+-
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~-~------d~~~~~~l~~~-~~~~ad~Vi~ 90 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVV-G------DAAEFETLKEC-GMEKADMVFA 90 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEE-S------CTTSHHHHHTT-TGGGCSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEE-e------cCCCHHHHHHc-CcccCCEEEE
Confidence 47899999999999999999999999998865443322111 11112222 2 23344443322 1246899997
Q ss_pred CCCcccccHHHHHHHHH
Q 009316 150 GYGFLAENAVFVEMCRE 166 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~ 166 (537)
..+....+......+..
T Consensus 91 ~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 91 FTNDDSTNFFISMNARY 107 (155)
T ss_dssp CSSCHHHHHHHHHHHHH
T ss_pred EeCCcHHHHHHHHHHHH
Confidence 66543333334444444
No 90
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=94.04 E-value=0.16 Score=44.42 Aligned_cols=102 Identities=15% Similarity=0.070 Sum_probs=65.6
Q ss_pred CCEEEEEcC----cHHHHHHHHHHHHcCCcEEEEecC--CCCC--C-chhh------ccCEEEEcCCCCCCCCCCCHHHH
Q 009316 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYST--IDKD--A-LHVK------LADESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 71 ~~~iLI~~~----g~ia~~ii~aa~~~Gi~~v~v~~~--~d~~--~-~~~~------~ad~~~~i~~~~~~~sy~~~~~i 135 (537)
.++|.|+|. |..+..+++.+++.|++++-++.. .+.. . .+.. -.|-++..-+ ......+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp------~~~~~~v 86 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRP------PSALMDH 86 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSC------HHHHTTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeC------HHHHHHH
Confidence 378999997 578999999999999998777554 2210 0 0101 1333332211 1122334
Q ss_pred HHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHH
Q 009316 136 LSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIR 180 (537)
Q Consensus 136 ~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~ 180 (537)
++.+.+.++..|+-..|+. +.++.+.+++.|+.++||+---+.
T Consensus 87 ~~~~~~~gi~~i~~~~g~~--~~~~~~~a~~~Gir~vgpnc~g~~ 129 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGIR--HPEFEKALKEAGIPVVADRCLMVE 129 (140)
T ss_dssp HHHHHHHCCSCEEECTTCC--CHHHHHHHHHTTCCEEESCCHHHH
T ss_pred HHHHHHcCCCEEEEcCCcC--HHHHHHHHHHcCCEEEcCCccceE
Confidence 5555567787777766663 568889999999999998754443
No 91
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.98 E-value=0.41 Score=46.67 Aligned_cols=91 Identities=15% Similarity=0.231 Sum_probs=59.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCC-Cch-h----hc--cC-EEEEcCCCCCCCCCCCHHHHHHHHH
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALH-V----KL--AD-ESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~-~~~-~----~~--ad-~~~~i~~~~~~~sy~~~~~i~~~a~ 140 (537)
+++|||.|. |.++..+++.+.+.|++++++..+.... .+. . .+ .. +.+. .++.|.+.+.++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d~~~l~~~~~ 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH-------GSIDDHASLVEAVK 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEEC-------CCTTCHHHHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEE-------eccCCHHHHHHHHc
Confidence 578999995 9999999999999999999886543321 010 0 01 11 2222 24677888887775
Q ss_pred HcCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc
Q 009316 141 SRGCTMLHPGYGFLA--ENAVFVEMCREHG-IN 170 (537)
Q Consensus 141 ~~~~d~V~pg~g~ls--E~~~~a~~~e~~G-l~ 170 (537)
++|+|+-.-+... ....+.+++.+.| +.
T Consensus 77 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 77 --NVDVVISTVGSLQIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp --TCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred --CCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence 6999886655421 1245667777777 53
No 92
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.92 E-value=0.2 Score=50.61 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=49.3
Q ss_pred CCCCCCCEEEEEc-CcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCC-CHHHHHHHHHHc
Q 009316 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYL-LIPNVLSAAISR 142 (537)
Q Consensus 66 ~~~~~~~~iLI~~-~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~-~~~~i~~~a~~~ 142 (537)
|..+++++|||.| .|.++..+++.+.+. |++|+++....+..........-.+..+ +.. +.+.+.++.+
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~------Dl~~d~~~~~~~~~-- 90 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEG------DITINKEWVEYHVK-- 90 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEEC------CTTTCHHHHHHHHH--
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeC------ccCCCHHHHHHHhc--
Confidence 4456678999999 599999999999998 9999999765443222111112222222 355 6777777776
Q ss_pred CCCEEEe
Q 009316 143 GCTMLHP 149 (537)
Q Consensus 143 ~~d~V~p 149 (537)
++|+|+-
T Consensus 91 ~~d~Vih 97 (372)
T 3slg_A 91 KCDVILP 97 (372)
T ss_dssp HCSEEEE
T ss_pred cCCEEEE
Confidence 5898874
No 93
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.85 E-value=1.1 Score=44.05 Aligned_cols=122 Identities=15% Similarity=0.209 Sum_probs=76.3
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC-CCCCch-h-------hccCEEEEcCCCCCCCCCCCHHHHHHHH
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI-DKDALH-V-------KLADESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~-d~~~~~-~-------~~ad~~~~i~~~~~~~sy~~~~~i~~~a 139 (537)
++++|||.|. |.++..+++.+.+.|++++++..+. +...+. . ..--+.+.. ++.|.+.+.++.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~-------D~~d~~~l~~a~ 75 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEG-------EMEEHEKMVSVL 75 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEe-------cCCCHHHHHHHH
Confidence 3578999995 9999999999999999999987554 211110 0 001123332 477888888777
Q ss_pred HHcCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc-ee----CCCH-------HHHHHhcCHHHHHHHHHHcCCCCC
Q 009316 140 ISRGCTMLHPGYGFLA--ENAVFVEMCREHG-IN-FI----GPNP-------DSIRIMGDKSTARETMKNAGVPTV 200 (537)
Q Consensus 140 ~~~~~d~V~pg~g~ls--E~~~~a~~~e~~G-l~-~i----Gp~~-------~~i~~~~dK~~~r~~l~~~Gvpvp 200 (537)
+ ++|+|+-.-+... ....+.+++.+.| +. |+ |.+. ........|....+++++.|+++.
T Consensus 76 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~ 149 (321)
T 3c1o_A 76 K--QVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYT 149 (321)
T ss_dssp T--TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCBE
T ss_pred c--CCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCeE
Confidence 4 5999886655421 1245677777777 53 33 2110 001122568888888888887753
No 94
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.84 E-value=0.41 Score=46.64 Aligned_cols=119 Identities=18% Similarity=0.280 Sum_probs=72.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC-CCCCc--hh----h---ccCEEEEcCCCCCCCCCCCHHHHHHHH
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI-DKDAL--HV----K---LADESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~-d~~~~--~~----~---~ad~~~~i~~~~~~~sy~~~~~i~~~a 139 (537)
+++|||.|. |.++..+++.+.+.|++++++..+. ....+ .. . .--+.+.. ++.|.+.+.++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~-------D~~d~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEG-------DINDHETLVKAI 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEe-------CCCCHHHHHHHH
Confidence 468999995 9999999999999999999886543 11111 00 0 01123332 467788887777
Q ss_pred HHcCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc-ee----CC--------CHHHHHHhcCHHHHHHHHHHcCCCC
Q 009316 140 ISRGCTMLHPGYGFLA--ENAVFVEMCREHG-IN-FI----GP--------NPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 140 ~~~~~d~V~pg~g~ls--E~~~~a~~~e~~G-l~-~i----Gp--------~~~~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
+ ++|+|+-.-+... ....+.+++.+.| +. |+ |. .+. ......|....+++++.|+++
T Consensus 75 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~-~~~y~sK~~~e~~~~~~~i~~ 147 (307)
T 2gas_A 75 K--QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPV-RQVFEEKASIRRVIEAEGVPY 147 (307)
T ss_dssp T--TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTH-HHHHHHHHHHHHHHHHHTCCB
T ss_pred h--CCCEEEECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcc-hhHHHHHHHHHHHHHHcCCCe
Confidence 4 6999886554321 1235667777777 53 33 21 011 111245666667777777664
No 95
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=93.83 E-value=0.22 Score=46.95 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=49.8
Q ss_pred CCCCCCEEEEEc-CcHHHHHHHHHHHHcC-CcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 67 VTCRQEKILVAN-RGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 67 ~~~~~~~iLI~~-~g~ia~~ii~aa~~~G-i~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
..+|||+|||.| .|.++..+++.+.+.| ++++++..+.+........--+.+.. +..|.+.+.++.+ ++
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~~ 89 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMG-------DVLNHAALKQAMQ--GQ 89 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEEC-------CTTCHHHHHHHHT--TC
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEe-------cCCCHHHHHHHhc--CC
Confidence 345678999999 5999999999999999 88888865543221111101122222 4667788877774 68
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|+|+-..+
T Consensus 90 D~vv~~a~ 97 (236)
T 3qvo_A 90 DIVYANLT 97 (236)
T ss_dssp SEEEEECC
T ss_pred CEEEEcCC
Confidence 98884433
No 96
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.73 E-value=0.029 Score=58.44 Aligned_cols=114 Identities=19% Similarity=0.160 Sum_probs=66.2
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~ 151 (537)
++|+|+|.|..+..+++.+++.|+++++|+.+++........ +..+..| +..+.+.+ ..+.-.++|+|+...
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-g~~vi~G------Dat~~~~L-~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-GMKVFYG------DATRMDLL-ESAGAAKAEVLINAI 76 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-TCCCEES------CTTCHHHH-HHTTTTTCSEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-CCeEEEc------CCCCHHHH-HhcCCCccCEEEECC
Confidence 579999999999999999999999999997655432222222 2222233 23344433 333334678877766
Q ss_pred CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCC
Q 009316 152 GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 152 g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
+....+......+++++ |....+.+..|..... .|.++|+..
T Consensus 77 ~~~~~n~~i~~~ar~~~-----p~~~Iiara~~~~~~~-~L~~~Gad~ 118 (413)
T 3l9w_A 77 DDPQTNLQLTEMVKEHF-----PHLQIIARARDVDHYI-RLRQAGVEK 118 (413)
T ss_dssp SSHHHHHHHHHHHHHHC-----TTCEEEEEESSHHHHH-HHHHTTCSS
T ss_pred CChHHHHHHHHHHHHhC-----CCCeEEEEECCHHHHH-HHHHCCCCE
Confidence 54333444444555443 2223334455555444 345677664
No 97
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.48 E-value=0.61 Score=45.55 Aligned_cols=120 Identities=18% Similarity=0.280 Sum_probs=72.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-----hc--cC-EEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KL--AD-ESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-----~~--ad-~~~~i~~~~~~~sy~~~~~i~~~a~~ 141 (537)
+++|||.|. |.++..+++.+.+.|++++++..+.....+.. .+ .. +.+. .++.|.+.+.++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~-------~D~~d~~~l~~~~~- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE-------ASLDDHQRLVDALK- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEEC-------CCSSCHHHHHHHHT-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEe-------CCCCCHHHHHHHHh-
Confidence 468999995 99999999999999999999865433211110 01 11 2222 25778888887774
Q ss_pred cCCCEEEeCCCcccc------cHHHHHHHHHCC-Cc-ee----CCCHH--------HHHHhcCHHHHHHHHHHcCCCC
Q 009316 142 RGCTMLHPGYGFLAE------NAVFVEMCREHG-IN-FI----GPNPD--------SIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 142 ~~~d~V~pg~g~lsE------~~~~a~~~e~~G-l~-~i----Gp~~~--------~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
++|+|+-..+.... ...+.+++.+.| +. |+ |.... .......|....+++++.|+++
T Consensus 76 -~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~ 152 (313)
T 1qyd_A 76 -QVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPY 152 (313)
T ss_dssp -TCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCB
T ss_pred -CCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCe
Confidence 69988865544311 135677788888 63 33 21000 0111245666666777766664
No 98
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.36 E-value=0.12 Score=48.36 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=66.1
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~ 151 (537)
+||+|+|.|.++..+++.+.+.|+++++++.+++.........+..+..+ +..+.+.+.++ .-.++|+|+...
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~g------d~~~~~~l~~a-~i~~ad~vi~~~ 73 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHG------DGSHKEILRDA-EVSKNDVVVILT 73 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEES------CTTSHHHHHHH-TCCTTCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEc------CCCCHHHHHhc-CcccCCEEEEec
Confidence 47999999999999999999999999999654432211111122233333 34455544433 335789999877
Q ss_pred CcccccHHHHHHHHH-CCCceeCCCHHHHHHhcCHHHHHHHHHHcCCC
Q 009316 152 GFLAENAVFVEMCRE-HGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 152 g~lsE~~~~a~~~e~-~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvp 198 (537)
+...+|......+.+ .+...+ +....|... .+.+++.|+.
T Consensus 74 ~~d~~n~~~~~~a~~~~~~~~i------ia~~~~~~~-~~~l~~~G~d 114 (218)
T 3l4b_C 74 PRDEVNLFIAQLVMKDFGVKRV------VSLVNDPGN-MEIFKKMGIT 114 (218)
T ss_dssp SCHHHHHHHHHHHHHTSCCCEE------EECCCSGGG-HHHHHHHTCE
T ss_pred CCcHHHHHHHHHHHHHcCCCeE------EEEEeCcch-HHHHHHCCCC
Confidence 654445455555554 343211 223333332 2346777775
No 99
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.34 E-value=0.18 Score=44.19 Aligned_cols=90 Identities=16% Similarity=0.161 Sum_probs=55.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh--cc-CEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK--LA-DESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~--~a-d~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
.++|+|+|.|.++..+++.+.+.|++++++..++........ .. +..+..+ +..+.+.+.++ .-.++|+|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~g------d~~~~~~l~~a-~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPG------DSNDSSVLKKA-GIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEES------CTTSHHHHHHH-TTTTCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEc------CCCCHHHHHHc-ChhhCCEE
Confidence 467999999999999999999999999999643211000111 11 2223233 34455554443 23579999
Q ss_pred EeCCCcccccHHHHHHHHHC
Q 009316 148 HPGYGFLAENAVFVEMCREH 167 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~ 167 (537)
+...+....|...+..+++.
T Consensus 76 i~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 76 LALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EECSSCHHHHHHHHHHHHHH
T ss_pred EEecCChHHHHHHHHHHHHH
Confidence 97766544454455555544
No 100
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=93.27 E-value=0.22 Score=54.25 Aligned_cols=120 Identities=14% Similarity=0.115 Sum_probs=74.8
Q ss_pred HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcC-CC-CCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCCCcc
Q 009316 159 VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAG-VP-TVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRG 236 (537)
Q Consensus 159 ~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~G-vp-vp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~G 236 (537)
.+.+++++.++.++.|....+ +.||..+.-+.+..- -| .+|++ ...+. ++ ..- ..|+||..|..|.|
T Consensus 474 ~ll~~l~~~~v~iieP~~~~l--lsNKailalLw~l~p~hp~LLpT~--f~~~~-~l----~~~--~yV~KPi~gReG~n 542 (619)
T 2io8_A 474 RLIDVLLRPEVLVFEPLWTVI--PGNKAILPILWSLFPHHRYLLDTD--FTVND-EL----VKT--GYAVKPIAGRCGSN 542 (619)
T ss_dssp CHHHHHTCTTCEEESCGGGGT--TTSTTHHHHHHHHSTTCTTCCCEE--SSCCH-HH----HHH--CEEEEETTCCTTTT
T ss_pred HHHHHHHhCCCEEECHHHHHH--hhhHHHHHHHHHhCCCCCCCCCee--ecCCc-cc----ccC--CEEEccCCCCCCCC
Confidence 477888888899998766655 999999998777541 22 22442 22333 21 122 48999999999999
Q ss_pred eEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccCC----cEEEEEEEEeCCCCEEEEeeee
Q 009316 237 MRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNP----RHIEFQVLADKYGNVVHFGERD 297 (537)
Q Consensus 237 v~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g~----~ei~v~v~~d~~G~vv~~~~r~ 297 (537)
|.+++..++.. + .....+++..++.|+|++-+ .++.+-++.- .|+...++.|.
T Consensus 543 V~i~~~~~~~~---~----~~~~~y~~~~~IyQe~~~lp~~d~~~~~iG~f~v-gg~~aG~~~R~ 599 (619)
T 2io8_A 543 IDLVSHHEEVL---D----KTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTV-GGNYGGTCLRG 599 (619)
T ss_dssp CEEECTTSCEE---E----ECCCTTTTSCEEEEECCCCCEETTEEEEEEEEEE-TTEEEEEEEEE
T ss_pred EEEEeCCChhH---h----hccccccCCCeEEEEecCCCCcCCcceEEEEEEE-CCEEEEEEEec
Confidence 99997622210 0 11123456788999999863 2333444433 33566666654
No 101
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.12 E-value=0.76 Score=44.02 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=59.4
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCcEEEEecCCCCCCchh-hccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 73 KILVANR-GEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 73 ~iLI~~~-g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~-~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
||+|+|. |.++..+++++.+. |++++++....+...... .-+|-.+.+. +.......+..|.+++++.|+-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT------~p~a~~~~~~~a~~~g~~~Vig 75 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFT------HPDVVMGNLEFLIDNGIHAVVG 75 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECS------CTTTHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEcc------ChHHHHHHHHHHHHcCCCEEEc
Confidence 7999995 99999999999876 999987763322111111 1356444332 1233556677777888888887
Q ss_pred CCCccccc-HHHHHHHHHC-CCc-eeCCC
Q 009316 150 GYGFLAEN-AVFVEMCREH-GIN-FIGPN 175 (537)
Q Consensus 150 g~g~lsE~-~~~a~~~e~~-Gl~-~iGp~ 175 (537)
..|+..|. ..+.+++++. +++ ++.|+
T Consensus 76 TTG~~~e~~~~l~~aa~~~~~~~vv~a~N 104 (245)
T 1p9l_A 76 TTGFTAERFQQVESWLVAKPNTSVLIAPN 104 (245)
T ss_dssp CCCCCHHHHHHHHHHHHTSTTCEEEECSC
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCEEEECC
Confidence 77765443 2344444433 554 34444
No 102
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.70 E-value=0.87 Score=44.49 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=45.6
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
|+++|||.| .|.++..+++.+.+.|++|+++........ .. --+.+.. +.. .+.+.++.+ ++|+|+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-~~~~~~~-------Dl~-~~~~~~~~~--~~d~Vi 67 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-DYEYRVS-------DYT-LEDLINQLN--DVDAVV 67 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEEC-------CCC-HHHHHHHTT--TCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-ceEEEEc-------ccc-HHHHHHhhc--CCCEEE
Confidence 568999999 599999999999999999999875522211 11 1122222 344 666666664 799887
Q ss_pred eCC
Q 009316 149 PGY 151 (537)
Q Consensus 149 pg~ 151 (537)
=.-
T Consensus 68 h~a 70 (311)
T 3m2p_A 68 HLA 70 (311)
T ss_dssp ECC
T ss_pred Ecc
Confidence 543
No 103
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.32 E-value=0.74 Score=44.74 Aligned_cols=73 Identities=21% Similarity=0.031 Sum_probs=49.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEecCCCCCC-chhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTIDKDA-LHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~G-i~~v~v~~~~d~~~-~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
.|+|||.|. |.++..+++.+.+.| ++++++..+++... ..... .-+.+.. ++.|.+.+.++.+ ++|.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~-------D~~d~~~l~~~~~--~~d~ 75 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQG-------DQDDQVIMELALN--GAYA 75 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHT--TCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEe-------cCCCHHHHHHHHh--cCCE
Confidence 478999996 999999999999999 99999875543211 00111 1123332 4677888877774 6999
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-.-+
T Consensus 76 vi~~a~ 81 (299)
T 2wm3_A 76 TFIVTN 81 (299)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 886554
No 104
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.19 E-value=0.27 Score=41.78 Aligned_cols=90 Identities=18% Similarity=0.090 Sum_probs=51.0
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~ 151 (537)
++|+|+|.|.++..+++.+.+.|+++++++.+.+.........+..+..+ +..+.+.+.+. .-.++|.|+-..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~------d~~~~~~l~~~-~~~~~d~vi~~~ 77 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVING------DCTKIKTLEDA-GIEDADMYIAVT 77 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEES------CTTSHHHHHHT-TTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEc------CCCCHHHHHHc-CcccCCEEEEee
Confidence 58999999999999999999999999888543321111111101112222 23344444332 124689988765
Q ss_pred CcccccHHHHHHHHHCC
Q 009316 152 GFLAENAVFVEMCREHG 168 (537)
Q Consensus 152 g~lsE~~~~a~~~e~~G 168 (537)
+....+..+...+...+
T Consensus 78 ~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp SCHHHHHHHHHHHHHTT
T ss_pred CCchHHHHHHHHHHHcC
Confidence 44322333444555544
No 105
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=92.08 E-value=0.7 Score=46.56 Aligned_cols=81 Identities=7% Similarity=-0.120 Sum_probs=51.1
Q ss_pred CCCCCCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCC--chhhcc---------C-EEEEcCCCCCCCCCCC
Q 009316 65 LKVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDA--LHVKLA---------D-ESVCIGEAPSSQSYLL 131 (537)
Q Consensus 65 ~~~~~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~--~~~~~a---------d-~~~~i~~~~~~~sy~~ 131 (537)
.+...|+++|||.| .|.++..+++.+.+.|++|+++....+... ....+. . +.+. .+..|
T Consensus 18 ~~~~~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~Dl~d 90 (375)
T 1t2a_A 18 YFQGHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHY-------GDLTD 90 (375)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEE-------CCTTC
T ss_pred hhHhhcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEE-------ccCCC
Confidence 45556668999999 599999999999999999999875443210 011110 1 1222 14567
Q ss_pred HHHHHHHHHHcCCCEEEeCCC
Q 009316 132 IPNVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 132 ~~~i~~~a~~~~~d~V~pg~g 152 (537)
.+.+.++.+..++|.|+-.-+
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~ 111 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGA 111 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHHhcCCCEEEECCC
Confidence 788888887767898875443
No 106
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.90 E-value=0.19 Score=47.60 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=29.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
.++|||+|.|+.|.+.++.+.+.|.+++++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 37899999999999999999999999999853
No 107
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.86 E-value=0.43 Score=44.28 Aligned_cols=72 Identities=15% Similarity=0.190 Sum_probs=49.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
|++|||.| .|.++..+++.+.+.|++++++....+..... . ..-.+.. .+..|.+.+.++.+ ++|+|+-
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~-~~~~~~~------~Dl~d~~~~~~~~~--~~d~vi~ 73 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-N-EHLKVKK------ADVSSLDEVCEVCK--GADAVIS 73 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-C-TTEEEEC------CCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-c-CceEEEE------ecCCCHHHHHHHhc--CCCEEEE
Confidence 57999999 59999999999999999999986543322111 0 1111211 24678888888775 6998885
Q ss_pred CCC
Q 009316 150 GYG 152 (537)
Q Consensus 150 g~g 152 (537)
.-|
T Consensus 74 ~a~ 76 (227)
T 3dhn_A 74 AFN 76 (227)
T ss_dssp CCC
T ss_pred eCc
Confidence 433
No 108
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=91.77 E-value=0.6 Score=45.99 Aligned_cols=75 Identities=9% Similarity=-0.002 Sum_probs=50.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
||+|||.| .|.++..+++.+.+.|++|+++............-.-+.+.. +..+.+.+.++.++.++|+|+-
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~d~vih 73 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNG-------DLRDKAFLRDVFTQENIEAVMH 73 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEEC-------CTTCHHHHHHHHHHSCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEEC-------CCCCHHHHHHHHhhcCCCEEEE
Confidence 47899998 599999999999999999998864333211111000122322 4567788888877668998875
Q ss_pred CCC
Q 009316 150 GYG 152 (537)
Q Consensus 150 g~g 152 (537)
.-+
T Consensus 74 ~a~ 76 (330)
T 2c20_A 74 FAA 76 (330)
T ss_dssp CCC
T ss_pred CCc
Confidence 444
No 109
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.67 E-value=1.7 Score=42.99 Aligned_cols=76 Identities=13% Similarity=-0.014 Sum_probs=49.7
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CcEEEEecCCCCCCc-hhh-c---cC-EEEEcCCCCCCCCCCCHHHHHHHH
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMG--IPCVAVYSTIDKDAL-HVK-L---AD-ESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~G--i~~v~v~~~~d~~~~-~~~-~---ad-~~~~i~~~~~~~sy~~~~~i~~~a 139 (537)
+++++|||.|. |.++..+++.+.+.| +++++++........ ... + .. +.+.. +..|.+.+.++.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------Dl~d~~~~~~~~ 94 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKG-------EIQNGELLEHVI 94 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEc-------CCCCHHHHHHHH
Confidence 34578999996 999999999999999 666666543211111 110 0 11 22222 467888898888
Q ss_pred HHcCCCEEEeCC
Q 009316 140 ISRGCTMLHPGY 151 (537)
Q Consensus 140 ~~~~~d~V~pg~ 151 (537)
+..++|+|+-.-
T Consensus 95 ~~~~~d~Vih~A 106 (346)
T 4egb_A 95 KERDVQVIVNFA 106 (346)
T ss_dssp HHHTCCEEEECC
T ss_pred hhcCCCEEEECC
Confidence 888899887443
No 110
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=91.42 E-value=1.5 Score=43.37 Aligned_cols=93 Identities=15% Similarity=0.113 Sum_probs=63.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHH-----HHcCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAA-----ISRGC 144 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a-----~~~~~ 144 (537)
|.||.|+|. |.++...++++++.+.+++++.+. +... ...+. .+ +...-|.+.+++++.+ ....+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~-~~~~--~~~~~-~~-----~~~~~~~~~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDP-ATNV--GLVDS-FF-----PEAEFFTEPEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECS-SCCC--GGGGG-TC-----TTCEEESCHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcC-CHHH--HHHHh-hC-----CCCceeCCHHHHHHHhhhhcccCCCC
Confidence 578999998 789999999999999999988743 2221 11111 11 1223477888888665 45679
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCceeC
Q 009316 145 TMLHPGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 145 d~V~pg~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
|+|+-..- ...+.+.+..+.+.|..++.
T Consensus 74 D~V~I~tP-~~~H~~~~~~al~aGkhVl~ 101 (312)
T 3o9z_A 74 DYLSIASP-NHLHYPQIRMALRLGANALS 101 (312)
T ss_dssp SEEEECSC-GGGHHHHHHHHHHTTCEEEE
T ss_pred cEEEECCC-chhhHHHHHHHHHCCCeEEE
Confidence 99886542 12356778888888987763
No 111
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.10 E-value=0.23 Score=44.86 Aligned_cols=91 Identities=9% Similarity=0.020 Sum_probs=51.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
.++|+|+|.|.++..+++.+++. |+++++++.+++.........-..+ .+ +..+.+.+.++..-.++|.|+-
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~-~g------d~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVI-SG------DATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEE-EC------CTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEE-Ec------CCCCHHHHHhccCCCCCCEEEE
Confidence 35799999999999999999999 9999999654432211111111222 22 2334443332201246888886
Q ss_pred CCCcccccHHHHHHHHHCC
Q 009316 150 GYGFLAENAVFVEMCREHG 168 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~G 168 (537)
..+....+......++..+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp CCSSHHHHHHHHHHHHHTT
T ss_pred eCCChHHHHHHHHHHHHHC
Confidence 5543223333444555544
No 112
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=91.08 E-value=0.54 Score=45.36 Aligned_cols=58 Identities=5% Similarity=0.023 Sum_probs=46.4
Q ss_pred EEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009316 73 KILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 73 ~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~ 151 (537)
+|||.|. |.++..+++.+.+.|++|+++... ..+..|.+.+.++.+..++|+|+-.-
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence 9999994 999999999999999999988530 12356788888888877899988543
Q ss_pred C
Q 009316 152 G 152 (537)
Q Consensus 152 g 152 (537)
+
T Consensus 65 ~ 65 (287)
T 3sc6_A 65 A 65 (287)
T ss_dssp C
T ss_pred c
Confidence 3
No 113
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=90.86 E-value=1.1 Score=45.47 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
++++|||.|. |.++..+++.+.+.|++|+++....+.........-+.+.. +..+.+.+.++.+ ++|+|+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~-------Dl~d~~~~~~~~~--~~d~Vi 98 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLV-------DLRVMENCLKVTE--GVDHVF 98 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEEC-------CTTSHHHHHHHHT--TCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEEC-------CCCCHHHHHHHhC--CCCEEE
Confidence 3578999996 99999999999999999999875543322111111123332 3567777777764 799887
Q ss_pred eCCC
Q 009316 149 PGYG 152 (537)
Q Consensus 149 pg~g 152 (537)
-.-+
T Consensus 99 h~A~ 102 (379)
T 2c5a_A 99 NLAA 102 (379)
T ss_dssp ECCC
T ss_pred ECce
Confidence 5443
No 114
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=90.78 E-value=0.54 Score=45.27 Aligned_cols=89 Identities=19% Similarity=0.132 Sum_probs=55.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 72 EKILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
|+|||.|. |.++..+++.+.+. |++++++..+.+.........-+.+.. +..|.+.+.++.+ ++|.|+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~-------D~~d~~~l~~~~~--~~d~vi 71 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHG-------DYNQPESLQKAFA--GVSKLL 71 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEEC-------CTTCHHHHHHHTT--TCSEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEe-------ccCCHHHHHHHHh--cCCEEE
Confidence 46999995 99999999999998 999999875443221100111123332 4667777777764 689887
Q ss_pred eCCCccc-c--c----HHHHHHHHHCCC
Q 009316 149 PGYGFLA-E--N----AVFVEMCREHGI 169 (537)
Q Consensus 149 pg~g~ls-E--~----~~~a~~~e~~Gl 169 (537)
-.-+... + | ..+.+++.+.|+
T Consensus 72 ~~a~~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 72 FISGPHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp ECCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred EcCCCCcCchHHHHHHHHHHHHHHHcCC
Confidence 4433211 1 2 234566667776
No 115
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=90.75 E-value=0.71 Score=44.97 Aligned_cols=74 Identities=12% Similarity=0.054 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
|.|+|||.|. |.++..+++.+.+. |++|+++......... .. .-+.+.. +..|.+.+.++.++.++|+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~-~~~~~~~-------D~~d~~~~~~~~~~~~~d~ 71 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV-VN-SGPFEVV-------NALDFNQIEHLVEVHKITD 71 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH-HH-SSCEEEC-------CTTCHHHHHHHHHHTTCCE
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc-cC-CCceEEe-------cCCCHHHHHHHHhhcCCCE
Confidence 3478999996 99999999999998 8999998654333111 11 1123322 4667888888887778998
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-.-+
T Consensus 72 vih~a~ 77 (312)
T 2yy7_A 72 IYLMAA 77 (312)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 875433
No 116
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=90.73 E-value=1.1 Score=44.23 Aligned_cols=76 Identities=14% Similarity=0.014 Sum_probs=50.6
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-ccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~ad-~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
.+++|||.| .|.++..+++.+.+.|++|+++............ +.. +.+.. +..|.+.+.++.+..++|+
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEG-------SIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEEC-------CTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEE-------eCCCHHHHHHHHhccCCcE
Confidence 357899999 5999999999999999999998654332211111 111 12222 4567778887777667998
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-.-+
T Consensus 93 vih~A~ 98 (333)
T 2q1w_A 93 VVHTAA 98 (333)
T ss_dssp EEECCC
T ss_pred EEECce
Confidence 875433
No 117
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.69 E-value=0.41 Score=46.20 Aligned_cols=36 Identities=14% Similarity=0.079 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||||.|.|.++..+++.+.+.|++|+++....
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 467899999999999999999999999999986543
No 118
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=90.62 E-value=1.2 Score=44.94 Aligned_cols=77 Identities=4% Similarity=-0.177 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCC--chhhcc---------CEEEEcCCCCCCCCCCCHHHHHH
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDA--LHVKLA---------DESVCIGEAPSSQSYLLIPNVLS 137 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~--~~~~~a---------d~~~~i~~~~~~~sy~~~~~i~~ 137 (537)
|+++|||.|. |.++..+++.+.+.|++|+++....+... ....+. ...+.. .+..+.+.+.+
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~Dl~d~~~~~~ 100 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY------ADLTDASSLRR 100 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEE------CCTTCHHHHHH
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEE------CCCCCHHHHHH
Confidence 4589999995 99999999999999999998875443210 001110 111111 14567788888
Q ss_pred HHHHcCCCEEEeCCC
Q 009316 138 AAISRGCTMLHPGYG 152 (537)
Q Consensus 138 ~a~~~~~d~V~pg~g 152 (537)
+.+..++|+|+=.-+
T Consensus 101 ~~~~~~~d~Vih~A~ 115 (381)
T 1n7h_A 101 WIDVIKPDEVYNLAA 115 (381)
T ss_dssp HHHHHCCSEEEECCS
T ss_pred HHHhcCCCEEEECCc
Confidence 877767898875443
No 119
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=90.61 E-value=0.66 Score=47.86 Aligned_cols=124 Identities=12% Similarity=0.084 Sum_probs=75.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCC---cEEEEecCCCCCCc-hhhcc------CEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGI---PCVAVYSTIDKDAL-HVKLA------DESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi---~~v~v~~~~d~~~~-~~~~a------d~~~~i~~~~~~~sy~~~~~i~~~a~ 140 (537)
|+||+|+|.|.++..+++.+.+.|. .+++++.+.+.... ...+. -..+.+ +..+.+.+.++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~-------D~~d~~~l~~~l~ 73 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTV-------DADSIEELVALIN 73 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEEC-------CTTCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEe-------cCCCHHHHHHHHH
Confidence 4789999999999999999999983 56665433221110 00111 122332 3456778888888
Q ss_pred HcCCCEEEeCCCcccccHHHHHHHHHCCCceeCC-CHHHH--HH--hcCHHHHHHHHHHcCCCCCCC
Q 009316 141 SRGCTMLHPGYGFLAENAVFVEMCREHGINFIGP-NPDSI--RI--MGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 141 ~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp-~~~~i--~~--~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
+.++|+|+-..+.. .+..+++.|.+.|..++-. +.... .. ........+.++++|+....+
T Consensus 74 ~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g 139 (405)
T 4ina_A 74 EVKPQIVLNIALPY-QDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLG 139 (405)
T ss_dssp HHCCSEEEECSCGG-GHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEEC
T ss_pred hhCCCEEEECCCcc-cChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEc
Confidence 77899998765543 3467788888889887611 11000 00 001124666788889887655
No 120
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.56 E-value=1.3 Score=43.92 Aligned_cols=67 Identities=16% Similarity=0.055 Sum_probs=46.7
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
...|+|||.|. |.++..+++.+.+.|++|+++....+.. - -+.+.. +..|.+.+.++.+ ++|+|
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-----~-~~~~~~-------Dl~d~~~~~~~~~--~~d~v 81 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGT-----G-GEEVVG-------SLEDGQALSDAIM--GVSAV 81 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSS-----C-CSEEES-------CTTCHHHHHHHHT--TCSEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCC-----C-ccEEec-------CcCCHHHHHHHHh--CCCEE
Confidence 34678999996 9999999999999999999997554331 0 122322 4667788877775 79988
Q ss_pred EeC
Q 009316 148 HPG 150 (537)
Q Consensus 148 ~pg 150 (537)
+-.
T Consensus 82 ih~ 84 (347)
T 4id9_A 82 LHL 84 (347)
T ss_dssp EEC
T ss_pred EEC
Confidence 744
No 121
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=90.29 E-value=1.6 Score=41.98 Aligned_cols=89 Identities=10% Similarity=0.057 Sum_probs=57.3
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 72 EKILVAN-RGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~~iLI~~-~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+||||.| .|.++..+++.+.+. |++++++..+++.........-+.+.. ++.|.+.+.++.+ ++|.|+-
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~-------D~~d~~~l~~~~~--~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQL-------DYFNQESMVEAFK--GMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEEC-------CTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEc-------CCCCHHHHHHHHh--CCCEEEE
Confidence 3699999 499999999999998 999999976554322111111233332 4678888877774 7999875
Q ss_pred CCCccccc-------HHHHHHHHHCCC
Q 009316 150 GYGFLAEN-------AVFVEMCREHGI 169 (537)
Q Consensus 150 g~g~lsE~-------~~~a~~~e~~Gl 169 (537)
.-+..... ..+.+++.+.|+
T Consensus 72 ~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 72 IPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 54432111 234566666665
No 122
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.14 E-value=0.3 Score=47.32 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=31.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
+++|||.|.|.++..+++.+.+.|++|+++....+
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 57899999999999999999999999999976544
No 123
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.13 E-value=0.57 Score=49.38 Aligned_cols=124 Identities=12% Similarity=0.086 Sum_probs=71.2
Q ss_pred CCCCCCCCCCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccC----EEEEcCCCCCCCCCCCHHHHH
Q 009316 62 GGALKVTCRQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLLIPNVL 136 (537)
Q Consensus 62 ~~~~~~~~~~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad----~~~~i~~~~~~~sy~~~~~i~ 136 (537)
+++.....++++|||+|.|.++..+++.+.+. |++++++..+.+. ...+++ ..+.+ ++.+.+.+.
T Consensus 14 ~~~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~k---a~~la~~~~~~~~~~-------D~~d~~~l~ 83 (467)
T 2axq_A 14 SGHIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLAN---AQALAKPSGSKAISL-------DVTDDSALD 83 (467)
T ss_dssp ---------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHH---HHHHHGGGTCEEEEC-------CTTCHHHHH
T ss_pred CCccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHH---HHHHHHhcCCcEEEE-------ecCCHHHHH
Confidence 34455556678999999999999999999998 7877666433221 111211 12222 345666666
Q ss_pred HHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 009316 137 SAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 137 ~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
++++ ++|+|+-..+.. -...+.+.+.+.|..++-.+...- +...+.+.++++|+.+..+
T Consensus 84 ~~l~--~~DvVIn~tp~~-~~~~v~~a~l~~g~~vvd~~~~~p----~~~~Ll~~Ak~aGv~~i~g 142 (467)
T 2axq_A 84 KVLA--DNDVVISLIPYT-FHPNVVKSAIRTKTDVVTSSYISP----ALRELEPEIVKAGITVMNE 142 (467)
T ss_dssp HHHH--TSSEEEECSCGG-GHHHHHHHHHHHTCEEEECSCCCH----HHHHHHHHHHHHTCEEECS
T ss_pred HHHc--CCCEEEECCchh-hhHHHHHHHHhcCCEEEEeecCCH----HHHHHHHHHHHcCCEEEec
Confidence 6664 699998776542 233456666677777664332000 1134445677889887766
No 124
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.11 E-value=1.3 Score=43.54 Aligned_cols=78 Identities=14% Similarity=0.019 Sum_probs=50.1
Q ss_pred CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCC-chhh-c---cC-EEEEcCCCCCCCCCCCHHHHHHHH
Q 009316 67 VTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDA-LHVK-L---AD-ESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 67 ~~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~-~~~~-~---ad-~~~~i~~~~~~~sy~~~~~i~~~a 139 (537)
...+.++|||.|. |.++..+++.+.+.|++|+++....+... .... + .. +.+.. +..+.+.+.++.
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~ 82 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDG-------DMADACSVQRAV 82 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEEC-------CTTCHHHHHHHH
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEEC-------CCCCHHHHHHHH
Confidence 3445789999995 99999999999999999999875443211 0010 1 11 12222 456778888888
Q ss_pred HHcCCCEEEeCC
Q 009316 140 ISRGCTMLHPGY 151 (537)
Q Consensus 140 ~~~~~d~V~pg~ 151 (537)
+..++|+|+-.-
T Consensus 83 ~~~~~d~Vih~A 94 (335)
T 1rpn_A 83 IKAQPQEVYNLA 94 (335)
T ss_dssp HHHCCSEEEECC
T ss_pred HHcCCCEEEECc
Confidence 776789887543
No 125
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.80 E-value=1.3 Score=43.71 Aligned_cols=75 Identities=11% Similarity=-0.066 Sum_probs=52.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-------cCEEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-------ADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-------ad~~~~i~~~~~~~sy~~~~~i~~~a~~~ 142 (537)
.++|||.| .|.++..+++.+.+.|++|++++...+........ .-+.+. .+..|.+.+.++.+..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~Dl~d~~~~~~~~~~~ 77 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHE-------TDVSDERALARIFDAH 77 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEEC-------CCTTCHHHHHHHHHHS
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEE-------eecCCHHHHHHHHhcc
Confidence 46899999 59999999999999999999986544332211110 112221 2466788888888877
Q ss_pred CCCEEEeCCC
Q 009316 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~pg~g 152 (537)
++|.|+-.-+
T Consensus 78 ~~d~vih~A~ 87 (341)
T 3enk_A 78 PITAAIHFAA 87 (341)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECcc
Confidence 8998875433
No 126
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=89.75 E-value=1.3 Score=41.36 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=30.4
Q ss_pred CCCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 67 ~~~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
..+.+|+++|.|.|..+..+++.+++.|++++.+.
T Consensus 8 ~~~~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfi 42 (220)
T 4ea9_A 8 ASLAIGGVVIIGGGGHAKVVIESLRACGETVAAIV 42 (220)
T ss_dssp CCCCSSCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccCCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEE
Confidence 34456889999999999999999999999998775
No 127
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=89.70 E-value=1.3 Score=40.77 Aligned_cols=70 Identities=10% Similarity=0.089 Sum_probs=49.1
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccC-EEEEcCCCCCCCCCCC-HHHHHHHHHHcCCCEEEe
Q 009316 73 KILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLL-IPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 73 ~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad-~~~~i~~~~~~~sy~~-~~~i~~~a~~~~~d~V~p 149 (537)
||||.| .|.++..+++.+.+.|++++++..+.+..... .. +.+.. +..| .+.+.++.+ ++|+|+-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~-------D~~d~~~~~~~~~~--~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHF-------DVDWTPEEMAKQLH--GMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEEC-------CTTSCHHHHHTTTT--TCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEe-------cccCCHHHHHHHHc--CCCEEEE
Confidence 799999 69999999999999999999997554322211 12 22222 3566 777777764 6999986
Q ss_pred CCCcc
Q 009316 150 GYGFL 154 (537)
Q Consensus 150 g~g~l 154 (537)
.-|..
T Consensus 70 ~ag~~ 74 (219)
T 3dqp_A 70 VSGSG 74 (219)
T ss_dssp CCCCT
T ss_pred CCcCC
Confidence 65543
No 128
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=89.64 E-value=0.37 Score=50.67 Aligned_cols=70 Identities=20% Similarity=0.288 Sum_probs=48.5
Q ss_pred CCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCCCcceEE--eCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccc
Q 009316 196 GVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRL--AKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ 273 (537)
Q Consensus 196 Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~--v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~ 273 (537)
=++.+|+ ..+.+.++...+.++.. -+||||+.|.||.||.+ --+.++..+..+++... ...+++|++++
T Consensus 340 il~~VpT--~~c~~~~~~~~vl~~l~-~lViKp~~g~gg~gv~iG~~~s~~e~~~~~~~i~~~------p~~yIaQe~v~ 410 (474)
T 3n6x_A 340 ILSNVPT--YQLSKADDLKYVLDNLA-ELVVKEVQGSGGYGMLVGPAASKQELEDFRQRILAN------PANYIAQPTLA 410 (474)
T ss_dssp SSEECCC--EETTSHHHHHHHHHSGG-GEEEEECCCE-----EEGGGCCHHHHHHHHHHHHHS------GGGEEEEECCC
T ss_pred hccCCCc--eecCCHHHHHHHHhchh-heEEEecCCCCCCceEECCcCCHHHHHHHHHHHHhC------CCCEEEeeccC
Confidence 3455566 45677888777776655 69999999999999988 45778888877776542 25699999998
Q ss_pred C
Q 009316 274 N 274 (537)
Q Consensus 274 g 274 (537)
-
T Consensus 411 l 411 (474)
T 3n6x_A 411 L 411 (474)
T ss_dssp C
T ss_pred C
Confidence 6
No 129
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=89.58 E-value=1.4 Score=42.12 Aligned_cols=31 Identities=39% Similarity=0.446 Sum_probs=26.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
|.||.|+|.|.++..+++++.+.+.+++.+.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~ 33 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVI 33 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEE
Confidence 5789999999999999999999877777654
No 130
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=89.50 E-value=0.83 Score=44.66 Aligned_cols=68 Identities=10% Similarity=-0.011 Sum_probs=39.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
|.|+|||.|. |.++..+++.+.+.|++|+++....+. .. .+.. +..+.+.+.++.+..++|+|+
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~-~~~~-------Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------PK-FEQV-------NLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------CC-eEEe-------cCCCHHHHHHHHHhhCCCEEE
Confidence 4578999996 999999999999999999988532221 01 2211 234455566666655789887
Q ss_pred eCCC
Q 009316 149 PGYG 152 (537)
Q Consensus 149 pg~g 152 (537)
-.-+
T Consensus 66 h~A~ 69 (315)
T 2ydy_A 66 HCAA 69 (315)
T ss_dssp ECC-
T ss_pred ECCc
Confidence 4433
No 131
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=89.35 E-value=1.1 Score=46.90 Aligned_cols=85 Identities=13% Similarity=0.098 Sum_probs=58.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
.||+.|.+.+..+..+++.++++|++++.+.+............++.+ + .|...+.+++++.++|.++.+
T Consensus 313 Gkrv~i~~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~v~-~---------~D~~~le~~i~~~~pDllig~ 382 (458)
T 3pdi_B 313 SARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVR-V---------GDLEDLEHAARAGQAQLVIGN 382 (458)
T ss_dssp TCEEEEECCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSCEE-E---------SHHHHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCcEE-e---------CCHHHHHHHHHhcCCCEEEEC
Confidence 489999999999999999999999999987654422211111123322 2 356678888888899999954
Q ss_pred CCcccccHHHHHHHHHCCCcee
Q 009316 151 YGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
.- | ...++++|++++
T Consensus 383 ~~---~----~~~a~k~gip~~ 397 (458)
T 3pdi_B 383 SH---A----LASARRLGVPLL 397 (458)
T ss_dssp TT---H----HHHHHHTTCCEE
T ss_pred hh---H----HHHHHHcCCCEE
Confidence 31 2 245667888876
No 132
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=89.22 E-value=1.5 Score=44.17 Aligned_cols=101 Identities=12% Similarity=0.017 Sum_probs=54.6
Q ss_pred CCCEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEecCCCCCCchhhccC-EEEEcCCCC--CCCC---CCC-------
Q 009316 70 RQEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-ESVCIGEAP--SSQS---YLL------- 131 (537)
Q Consensus 70 ~~~~iLI~~~g~i-----a~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad-~~~~i~~~~--~~~s---y~~------- 131 (537)
|.+||||+++|.- +..+++++++.|++|..+.+........+..+. +...++... .... ...
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 5689999998752 688999999999999988643321111111121 122232110 0001 111
Q ss_pred HHHHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 132 IPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 132 ~~~i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
......+.++.++|+|+...|+.+--.. -++...|+|++
T Consensus 81 ~~~~~~~l~~~~PDvVi~~g~~~s~p~~--laA~~~~iP~v 119 (365)
T 3s2u_A 81 LFQALRVIRQLRPVCVLGLGGYVTGPGG--LAARLNGVPLV 119 (365)
T ss_dssp HHHHHHHHHHHCCSEEEECSSSTHHHHH--HHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCcchHHHH--HHHHHcCCCEE
Confidence 1233456778899999976665432222 23456788776
No 133
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=89.19 E-value=1.3 Score=43.57 Aligned_cols=70 Identities=16% Similarity=0.024 Sum_probs=46.9
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
++|||.| .|.++..+++.+.+.|++|+++....+........--+.+.. +..|.+.+.++.+ ++|+|+-.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~-------Dl~d~~~~~~~~~--~~d~vih~ 84 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVA-------EMLDHAGLERALR--GLDGVIFS 84 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEEC-------CTTCHHHHHHHTT--TCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEe-------cCCCHHHHHHHHc--CCCEEEEC
Confidence 4899999 599999999999999999999875443221100001122322 4567777777764 68988743
No 134
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=88.86 E-value=1.2 Score=44.06 Aligned_cols=76 Identities=16% Similarity=0.046 Sum_probs=50.6
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCC------CCchh-hc----cC--EEEEcCCCCCCCCCCCHHHH
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDK------DALHV-KL----AD--ESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~------~~~~~-~~----ad--~~~~i~~~~~~~sy~~~~~i 135 (537)
|.|+|||.| .|.++..+++.+.+.|++|+++...... ..... .+ .. +.+.. +..+.+.+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-------D~~~~~~~ 73 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEM-------DILDQGAL 73 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEEC-------CTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEEC-------CCCCHHHH
Confidence 457999999 5999999999999999999998643321 11110 00 11 22322 45677788
Q ss_pred HHHHHHcCCCEEEeCCC
Q 009316 136 LSAAISRGCTMLHPGYG 152 (537)
Q Consensus 136 ~~~a~~~~~d~V~pg~g 152 (537)
.++.+..++|.|+-.-+
T Consensus 74 ~~~~~~~~~d~vih~A~ 90 (348)
T 1ek6_A 74 QRLFKKYSFMAVIHFAG 90 (348)
T ss_dssp HHHHHHCCEEEEEECCS
T ss_pred HHHHHhcCCCEEEECCC
Confidence 87777668998875443
No 135
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=88.63 E-value=1.2 Score=44.19 Aligned_cols=74 Identities=5% Similarity=0.018 Sum_probs=50.2
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-c---------cC-EEEEcCCCCCCCCCCCHHHHHH
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L---------AD-ESVCIGEAPSSQSYLLIPNVLS 137 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~---------ad-~~~~i~~~~~~~sy~~~~~i~~ 137 (537)
+.++|||.| .|.++..+++.+.+.|++|+++............ + .. +.+.. +..|.+.+.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG-------DIRDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEEC-------CTTCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEc-------cCCCHHHHHH
Confidence 358999999 5999999999999999999998754433221111 0 11 22322 4667777777
Q ss_pred HHHHcCCCEEEeCCC
Q 009316 138 AAISRGCTMLHPGYG 152 (537)
Q Consensus 138 ~a~~~~~d~V~pg~g 152 (537)
+++ ++|+|+-.-+
T Consensus 97 ~~~--~~d~Vih~A~ 109 (351)
T 3ruf_A 97 VMK--GVDHVLHQAA 109 (351)
T ss_dssp HTT--TCSEEEECCC
T ss_pred Hhc--CCCEEEECCc
Confidence 775 7998875443
No 136
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=88.50 E-value=2 Score=41.88 Aligned_cols=73 Identities=8% Similarity=0.016 Sum_probs=50.4
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
...++|||.| .|.++..+++.+.+.|++|+++....+. .. +.-+.+.. +..|.+.+.++.+..++|+|
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~-------Dl~d~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISL-------DIMDSQRVKKVISDIKPDYI 78 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEEC-------CTTCHHHHHHHHHHHCCSEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEEC-------CCCCHHHHHHHHHhcCCCEE
Confidence 3468999999 5899999999999999999998755443 11 11122222 45677888888777679988
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-.-+
T Consensus 79 ih~A~ 83 (321)
T 2pk3_A 79 FHLAA 83 (321)
T ss_dssp EECCS
T ss_pred EEcCc
Confidence 75443
No 137
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.72 E-value=0.73 Score=46.70 Aligned_cols=115 Identities=8% Similarity=0.024 Sum_probs=73.6
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~ 151 (537)
+||||+|.|.++..+++.+.+ .+++.+++.+..........+ ..+.+ +..|.+.+.++++ ++|+|+-.-
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~-~~~~~-------d~~d~~~l~~~~~--~~DvVi~~~ 85 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFA-TPLKV-------DASNFDKLVEVMK--EFELVIGAL 85 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTS-EEEEC-------CTTCHHHHHHHHT--TCSEEEECC
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccC-CcEEE-------ecCCHHHHHHHHh--CCCEEEEec
Confidence 479999999999999999876 467666543221111111111 23444 2567888888875 589998775
Q ss_pred CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 009316 152 GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 152 g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
+.. -+..++++|.+.|..++-.+.+. ..-....+.++++|+...+.
T Consensus 86 p~~-~~~~v~~~~~~~g~~yvD~s~~~----~~~~~l~~~a~~~g~~~i~~ 131 (365)
T 3abi_A 86 PGF-LGFKSIKAAIKSKVDMVDVSFMP----ENPLELRDEAEKAQVTIVFD 131 (365)
T ss_dssp CGG-GHHHHHHHHHHHTCEEEECCCCS----SCGGGGHHHHHHTTCEEECC
T ss_pred CCc-ccchHHHHHHhcCcceEeeeccc----hhhhhhhhhhccCCceeeec
Confidence 542 35678999999999887433111 01123456678899887765
No 138
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=87.65 E-value=0.96 Score=43.33 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=49.7
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
++|+|||.| .|.++..+++.+.+.|++++++....+... ...-+.+.. +..|.+.+.++++ ++|.|+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~-------Dl~d~~~~~~~~~--~~D~vi 69 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQC-------DLADANAVNAMVA--GCDGIV 69 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEEC-------CTTCHHHHHHHHT--TCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEc-------CCCCHHHHHHHHc--CCCEEE
Confidence 357899999 588999999999999999998875544332 111122322 3567778877775 699887
Q ss_pred eCCC
Q 009316 149 PGYG 152 (537)
Q Consensus 149 pg~g 152 (537)
-.-|
T Consensus 70 ~~Ag 73 (267)
T 3rft_A 70 HLGG 73 (267)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 5544
No 139
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.23 E-value=2.4 Score=41.73 Aligned_cols=75 Identities=13% Similarity=-0.039 Sum_probs=50.1
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCch-hhccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~-~~~ad-~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
.|+|||.|. |.++..+++.+.+.|++|+++.......... ..+.. +.+.. +..|.+.+.+++++.++|+|
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~-------Dl~d~~~~~~~~~~~~~D~v 92 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEG-------SVTDAGLLERAFDSFKPTHV 92 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEEC-------CTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEe-------eCCCHHHHHHHHhhcCCCEE
Confidence 368999995 9999999999999999999986533221100 11111 12222 45677778777776689988
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-.-|
T Consensus 93 ih~A~ 97 (330)
T 2pzm_A 93 VHSAA 97 (330)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 75443
No 140
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=86.90 E-value=2.6 Score=42.08 Aligned_cols=75 Identities=11% Similarity=0.015 Sum_probs=48.7
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHH--cCCcEEEEecCCCCC----------Cchhhcc---CEEEEcCCCCCCCCCCCHH
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHE--MGIPCVAVYSTIDKD----------ALHVKLA---DESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~--~Gi~~v~v~~~~d~~----------~~~~~~a---d~~~~i~~~~~~~sy~~~~ 133 (537)
+.++|||.| .|.++..+++.+.+ .|++|++++...... ....... -+.+.. +..+.+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~ 81 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA-------DINNPL 81 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC-------CTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEEC-------CCCCHH
Confidence 357999998 59999999999999 999999987533310 1111111 133332 356667
Q ss_pred HHHHHHHHcCCCEEEeCCC
Q 009316 134 NVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 134 ~i~~~a~~~~~d~V~pg~g 152 (537)
.+.++ ...++|+|+=.-+
T Consensus 82 ~~~~~-~~~~~D~vih~A~ 99 (362)
T 3sxp_A 82 DLRRL-EKLHFDYLFHQAA 99 (362)
T ss_dssp HHHHH-TTSCCSEEEECCC
T ss_pred HHHHh-hccCCCEEEECCc
Confidence 76665 4468999885544
No 141
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=86.63 E-value=3.2 Score=39.26 Aligned_cols=72 Identities=15% Similarity=0.108 Sum_probs=47.6
Q ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009316 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 68 ~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~---- 142 (537)
..|.|++||.|. +.++..+++.+.+.|+++++++.+.+... ...+.++ ..|.+.+.+++++.
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d-------~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIK-------DSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECS-------CSSHHHHHHHHHHHHTTT
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEE-------eCCHHHHHHHHHHHHHHc
Confidence 345689999994 78999999999999999999876554322 2334332 34555555555442
Q ss_pred -CCCEEEeCCC
Q 009316 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~pg~g 152 (537)
++|.++-.-|
T Consensus 86 g~iD~li~~Ag 96 (251)
T 3orf_A 86 IKVDTFVCAAG 96 (251)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 5788876544
No 142
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=86.57 E-value=1.1 Score=43.69 Aligned_cols=61 Identities=13% Similarity=0.105 Sum_probs=46.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
.++|||.| .|.++..+++.+.+.|++++++.... .-+..+.+.+.++.+..++|+|+-
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~~d~vih 61 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVYL 61 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence 46899999 59999999999999999888763221 013567778888887668998875
Q ss_pred CCC
Q 009316 150 GYG 152 (537)
Q Consensus 150 g~g 152 (537)
.-+
T Consensus 62 ~a~ 64 (321)
T 1e6u_A 62 AAA 64 (321)
T ss_dssp CCC
T ss_pred cCe
Confidence 443
No 143
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.49 E-value=0.37 Score=45.44 Aligned_cols=112 Identities=12% Similarity=0.097 Sum_probs=64.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
.++|+|+|.|.++..+++.+.+.|+ ++++..+++... ... .+..+..+ +..+.+.+.++ .-.++|+|+..
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~g------d~~~~~~l~~a-~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHG------DPTRVSDLEKA-NVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHH-HHH-TTCEEEES------CTTCHHHHHHT-TCTTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHH-HHh-cCCeEEEc------CCCCHHHHHhc-CcchhcEEEEc
Confidence 4689999999999999999999999 888843332111 111 22223233 34455544433 23578999877
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCC
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvp 198 (537)
.+....|......+++.+.. ...+..+.|.... +.++++|+.
T Consensus 79 ~~~d~~n~~~~~~a~~~~~~-----~~iia~~~~~~~~-~~l~~~G~~ 120 (234)
T 2aef_A 79 LESDSETIHCILGIRKIDES-----VRIIAEAERYENI-EQLRMAGAD 120 (234)
T ss_dssp CSCHHHHHHHHHHHHHHCSS-----SEEEEECSSGGGH-HHHHHHTCS
T ss_pred CCCcHHHHHHHHHHHHHCCC-----CeEEEEECCHhHH-HHHHHCCCC
Confidence 65433444555556665432 1222233333333 455667766
No 144
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.40 E-value=2.1 Score=41.62 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=29.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 578999994 7899999999999999999886543
No 145
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=86.38 E-value=3.3 Score=41.09 Aligned_cols=75 Identities=12% Similarity=-0.039 Sum_probs=51.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc---cC--EEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL---AD--ESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~---ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
.++|||.| .|.++..+++.+.+.|++|+++....+........ .+ +.+.. +..+.+.+.++.+..++
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 81 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG-------DIRDQNKLLESIREFQP 81 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEEC-------CTTCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEc-------cccCHHHHHHHHHhcCC
Confidence 47899999 59999999999999999999987554332211110 11 22322 45677888888777689
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|+|+=.-+
T Consensus 82 d~vih~A~ 89 (357)
T 1rkx_A 82 EIVFHMAA 89 (357)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 98875433
No 146
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=86.31 E-value=2.6 Score=42.78 Aligned_cols=78 Identities=17% Similarity=0.150 Sum_probs=52.3
Q ss_pred CCCEEEEE--cCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 70 RQEKILVA--NRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~~iLI~--~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
..++|||. +.|.++.-.++.|+.+|.+++++...++......++ +|..+... +....+.+.++....++|.
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~------~~~~~~~v~~~t~~~g~d~ 243 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAA------SPTFMQDLTEALVSTGATI 243 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETT------STTHHHHHHHHHHHHCCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCC------ChHHHHHHHHHhcCCCceE
Confidence 35789998 789999999999999999999886544332222223 45554321 1123456677776678999
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
|+-..|.
T Consensus 244 v~d~~g~ 250 (379)
T 3iup_A 244 AFDATGG 250 (379)
T ss_dssp EEESCEE
T ss_pred EEECCCc
Confidence 9976553
No 147
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=86.22 E-value=2.5 Score=41.52 Aligned_cols=77 Identities=12% Similarity=0.071 Sum_probs=50.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCc-hh-hcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HV-KLA--DESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~-~~-~~a--d~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d 145 (537)
.|+|||.|. |.++..+++.+.+.|++|+++....+.... .. .+. .....+ ..+..|.+.+.++.+..++|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~~~~~d 77 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKII-----HMDLLEFSNIIRTIEKVQPD 77 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEEC-----CCCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEE-----ECCCCCHHHHHHHHHhcCCC
Confidence 478999996 999999999999999999988654432211 11 110 111112 12456778888887776789
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+=.-+
T Consensus 78 ~vih~A~ 84 (345)
T 2z1m_A 78 EVYNLAA 84 (345)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8875544
No 148
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=86.15 E-value=2.5 Score=41.66 Aligned_cols=75 Identities=17% Similarity=0.012 Sum_probs=49.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCc--hhhcc--C--EEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL--HVKLA--D--ESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~--~~~~a--d--~~~~i~~~~~~~sy~~~~~i~~~a~~~~ 143 (537)
||+|||.| .|.++..+++.+.+.|++|++++........ ...+. . +.+.. +..+.+.+.++.+..+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~ 73 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHG-------DIRNKNDVTRLITKYM 73 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEEC-------CTTCHHHHHHHHHHHC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEc-------CCCCHHHHHHHHhccC
Confidence 46899999 5999999999999999999988642211110 00111 1 22322 4567788888777667
Q ss_pred CCEEEeCCC
Q 009316 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~pg~g 152 (537)
+|+|+-.-+
T Consensus 74 ~d~vih~A~ 82 (347)
T 1orr_A 74 PDSCFHLAG 82 (347)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 998875544
No 149
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=86.14 E-value=2.3 Score=40.40 Aligned_cols=75 Identities=7% Similarity=-0.056 Sum_probs=47.5
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----c
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAIS-----R 142 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~-----~ 142 (537)
..|++||.| .|.++..+++.+.+.|+++++++.+.+. .... .+....+.. +..+.+.+.++.++ .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~g 76 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQV-------DLEDERERVRFVEEAAYALG 76 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEEC-------CTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEe-------eCCCHHHHHHHHHHHHHHcC
Confidence 357899999 4789999999999999999988655443 1111 111233333 24455555554443 2
Q ss_pred CCCEEEeCCC
Q 009316 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~pg~g 152 (537)
++|.++-.-|
T Consensus 77 ~iD~lv~~Ag 86 (256)
T 2d1y_A 77 RVDVLVNNAA 86 (256)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898875544
No 150
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=86.14 E-value=0.44 Score=50.14 Aligned_cols=76 Identities=17% Similarity=0.024 Sum_probs=51.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
-+||+|+|.|..+..+++.+.+.|+++++++.+++........-|-.+..| +..+.+ +++.|--..+|+++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~G------d~~~~~-~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNG------HASHPD-VLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEES------CTTCHH-HHHHHTTTTCSEEEEC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEE------cCCCHH-HHHhcCCCcCCEEEEE
Confidence 368999999999999999999999999999655443222122235444454 233444 4445555679999876
Q ss_pred CCc
Q 009316 151 YGF 153 (537)
Q Consensus 151 ~g~ 153 (537)
.+.
T Consensus 76 t~~ 78 (461)
T 4g65_A 76 TNT 78 (461)
T ss_dssp CSC
T ss_pred cCC
Confidence 653
No 151
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.07 E-value=1.4 Score=42.66 Aligned_cols=35 Identities=9% Similarity=0.069 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|.++|+|+|.|..++..+..+++.|++++++...
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 34578999999999999999999999999999543
No 152
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=85.83 E-value=3.8 Score=40.50 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=62.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHH------HcC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAI------SRG 143 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~------~~~ 143 (537)
|.||.|+|. |.++...++++++.|.+++++.+.. ... ...+.. + +....|.+.+++++... ...
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~-~~~--~~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~~ 73 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDIN-DSV--GIIDSI-S-----PQSEFFTEFEFFLDHASNLKRDSATA 73 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSS-CCC--GGGGGT-C-----TTCEEESSHHHHHHHHHHHTTSTTTS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCC-HHH--HHHHhh-C-----CCCcEECCHHHHHHhhhhhhhccCCC
Confidence 578999998 7899999999999999999887432 221 112211 1 12234778888886532 467
Q ss_pred CCEEEeCCCcccccHHHHHHHHHCCCceeC
Q 009316 144 CTMLHPGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 144 ~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
+|+|+-..-. ..+.+.+..+.+.|..++.
T Consensus 74 vD~V~I~tP~-~~H~~~~~~al~aGkhVl~ 102 (318)
T 3oa2_A 74 LDYVSICSPN-YLHYPHIAAGLRLGCDVIC 102 (318)
T ss_dssp CCEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred CcEEEECCCc-HHHHHHHHHHHHCCCeEEE
Confidence 9998865421 2356777888888987663
No 153
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=85.72 E-value=2.6 Score=41.87 Aligned_cols=73 Identities=10% Similarity=0.086 Sum_probs=48.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-c---------cC-EEEEcCCCCCCCCCCCHHHHHHH
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L---------AD-ESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~---------ad-~~~~i~~~~~~~sy~~~~~i~~~ 138 (537)
+++|||.|. |.++..+++.+.+.|++|+++............ + .. +.+.. +..+.+.+.++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 99 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG-------DIRNLDDCNNA 99 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEEC-------CTTSHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEEC-------CCCCHHHHHHH
Confidence 578999996 999999999999999999988654322111110 0 11 12222 35667777777
Q ss_pred HHHcCCCEEEeCCC
Q 009316 139 AISRGCTMLHPGYG 152 (537)
Q Consensus 139 a~~~~~d~V~pg~g 152 (537)
++ ++|+|+-.-+
T Consensus 100 ~~--~~d~vih~A~ 111 (352)
T 1sb8_A 100 CA--GVDYVLHQAA 111 (352)
T ss_dssp HT--TCSEEEECCS
T ss_pred hc--CCCEEEECCc
Confidence 65 7998875544
No 154
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=85.65 E-value=0.71 Score=44.08 Aligned_cols=71 Identities=10% Similarity=-0.019 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
|+|+|||.|. |.++..+++.+.+.|++|+++....+.... .....+ .-+..+.+.+.++.+ ++|.|+
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~-----~~Dl~d~~~~~~~~~--~~d~vi 68 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE-----AHEEIV-----ACDLADAQAVHDLVK--DCDGII 68 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC-----TTEEEC-----CCCTTCHHHHHHHHT--TCSEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC-----CCccEE-----EccCCCHHHHHHHHc--CCCEEE
Confidence 4689999996 999999999999999998888654432111 111111 124567777777764 589887
Q ss_pred eCCC
Q 009316 149 PGYG 152 (537)
Q Consensus 149 pg~g 152 (537)
-.-+
T Consensus 69 ~~a~ 72 (267)
T 3ay3_A 69 HLGG 72 (267)
T ss_dssp ECCS
T ss_pred ECCc
Confidence 5443
No 155
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=85.61 E-value=3.4 Score=38.28 Aligned_cols=69 Identities=13% Similarity=0.020 Sum_probs=46.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc----CCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR----GCT 145 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~----~~d 145 (537)
.|++||.| .|.++..+++.+.+.|++++++....+.. .+ ..+.. +..+.+.+.+++++. ++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~----~~--~~~~~-------D~~~~~~~~~~~~~~~~~~~~d 68 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE----DL--IYVEG-------DVTREEDVRRAVARAQEEAPLF 68 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS----SS--EEEEC-------CTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcccc----ce--EEEeC-------CCCCHHHHHHHHHHHHhhCCce
Confidence 47899999 58899999999999999999987554311 11 33333 345566665555432 688
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.++-.-|
T Consensus 69 ~li~~ag 75 (242)
T 1uay_A 69 AVVSAAG 75 (242)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 8875544
No 156
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=85.59 E-value=5.7 Score=40.56 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=32.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
+-.+++|.|.|..+..+++.++.+|++|+++++.++
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 346899999999999999999999999999976655
No 157
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=85.55 E-value=2 Score=45.54 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=58.4
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVR-VIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~-ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+|+|+|+|-|.++.. +++.++++|++|.+.+....+.........-.+.++. +.+.+ .++|.|+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--------~~~~~------~~~d~vV~ 87 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHH--------RPENV------LDASVVVV 87 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSC--------CGGGG------TTCSEEEE
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCC--------CHHHc------CCCCEEEE
Confidence 689999999999985 8999999999998875332211111111223344431 11111 35899998
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHH
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDS 178 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~ 178 (537)
..|.-..++.+.+ +.+.|+++++ ..+.
T Consensus 88 Spgi~~~~p~~~~-a~~~gi~v~~-~~e~ 114 (494)
T 4hv4_A 88 STAISADNPEIVA-AREARIPVIR-RAEM 114 (494)
T ss_dssp CTTSCTTCHHHHH-HHHTTCCEEE-HHHH
T ss_pred CCCCCCCCHHHHH-HHHCCCCEEc-HHHH
Confidence 7776666776644 5678999884 3443
No 158
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.39 E-value=1.5 Score=46.05 Aligned_cols=86 Identities=15% Similarity=0.100 Sum_probs=53.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccC---EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD---ESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad---~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
.++|||+|.|..|.+.++.+.+.|.+++++..+.. .....+++ -.+..+ .|.. +.+ .++|.|
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~--~~~~~l~~~~~i~~~~~------~~~~-~~l------~~~~lV 76 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFI--PQFTVWANEGMLTLVEG------PFDE-TLL------DSCWLA 76 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCC--HHHHHHHTTTSCEEEES------SCCG-GGG------TTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCC--HHHHHHHhcCCEEEEEC------CCCc-ccc------CCccEE
Confidence 37899999999999999999999999999864322 11122221 112111 1211 111 267888
Q ss_pred EeCCCcccccHHHHHHHHHCCCce
Q 009316 148 HPGYGFLAENAVFVEMCREHGINF 171 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~ 171 (537)
+...|--..|..+.+.+++.|+++
T Consensus 77 i~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 77 IAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCEE
T ss_pred EEcCCCHHHHHHHHHHHHHcCCEE
Confidence 876654333566777777777764
No 159
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=85.29 E-value=3.1 Score=41.32 Aligned_cols=90 Identities=12% Similarity=0.047 Sum_probs=57.7
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHcCCcEEEEecCCCCCC-chhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVR-VIRTAHEMGIPCVAVYSTIDKDA-LHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~-ii~aa~~~Gi~~v~v~~~~d~~~-~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
+|+|.|+|-|.++.. +++.++++|++|.+.+....... .......-.+..+. +.+.+.. .++|.|+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--------~~~~l~~----~~~d~vV 71 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--------DAAQLDE----FKADVYV 71 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--------CGGGGGS----CCCSEEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--------CHHHcCC----CCCCEEE
Confidence 689999999999995 88999999999998865433211 11111223344431 1111100 3589998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
...|.-..++.+. .+.+.|+++++
T Consensus 72 ~Spgi~~~~p~~~-~a~~~gi~v~~ 95 (326)
T 3eag_A 72 IGNVAKRGMDVVE-AILNLGLPYIS 95 (326)
T ss_dssp ECTTCCTTCHHHH-HHHHTTCCEEE
T ss_pred ECCCcCCCCHHHH-HHHHcCCcEEe
Confidence 7777665666654 45678999884
No 160
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=85.20 E-value=0.69 Score=43.28 Aligned_cols=89 Identities=12% Similarity=0.137 Sum_probs=57.7
Q ss_pred CCEEEEEcCcHHHHHHHHH--HHHcCCcEEEEecCCCCC-Cchh-hccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 71 QEKILVANRGEIAVRVIRT--AHEMGIPCVAVYSTIDKD-ALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~a--a~~~Gi~~v~v~~~~d~~-~~~~-~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
.++|+|+|.|..+..+++. .++.|++++++. |.|+. .... ....-.+ + ..+.+.++++++++|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~-D~dp~~kiG~~~i~GvpV----------~-~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAF-DLDSNDLVGKTTEDGIPV----------Y-GISTINDHLIDSDIET 151 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEE-ECTTSTTTTCBCTTCCBE----------E-EGGGHHHHC-CCSCCE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEE-eCCchhccCceeECCeEE----------e-CHHHHHHHHHHcCCCE
Confidence 4789999999999999988 456789998776 34433 2222 2222222 1 2457788888889998
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcee
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
++-..-.. ...+.++.+.+.|++-+
T Consensus 152 vIIAvPs~-~aq~v~d~lv~~GIk~I 176 (212)
T 3keo_A 152 AILTVPST-EAQEVADILVKAGIKGI 176 (212)
T ss_dssp EEECSCGG-GHHHHHHHHHHHTCCEE
T ss_pred EEEecCch-hHHHHHHHHHHcCCCEE
Confidence 87543221 22467777788887644
No 161
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=84.98 E-value=3.4 Score=38.82 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=62.0
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCC
Q 009316 73 KILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 73 ~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~g 152 (537)
||.|+|.|.++..+++.+.+.|++++.++... ... +. .|.+.+++++ .++|+|+-...
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~-~~~------~~-----------~~~~~~~l~~----~~~DvVv~~~~ 59 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR-GEH------EK-----------MVRGIDEFLQ----REMDVAVEAAS 59 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS-CCC------TT-----------EESSHHHHTT----SCCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC-cch------hh-----------hcCCHHHHhc----CCCCEEEECCC
Confidence 79999999999999999998999987776322 211 11 1456666553 57999986543
Q ss_pred cccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCC
Q 009316 153 FLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 153 ~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvp 198 (537)
. ....+....+.+.|..++--++-+.....-.....+.+++.|+.
T Consensus 60 ~-~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 60 Q-QAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp H-HHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred H-HHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 1 12234455556678776644432211100012445566777766
No 162
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.81 E-value=1.1 Score=43.02 Aligned_cols=30 Identities=10% Similarity=0.262 Sum_probs=26.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCc-EEEE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIP-CVAV 100 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~-~v~v 100 (537)
.++|||+|.|.++..+++.+.+.|+. ++++
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lv 61 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLL 61 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEE
Confidence 36899999999999999999999995 5555
No 163
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=84.76 E-value=1.4 Score=41.30 Aligned_cols=69 Identities=12% Similarity=-0.044 Sum_probs=46.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc--CCCEE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR--GCTML 147 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~--~~d~V 147 (537)
||+|||.|. |.++..+++.+.+.|++++++....+.... + + ..+..+.+.+.+++++. ++|.|
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~----~-----~~D~~~~~~~~~~~~~~~~~~d~v 66 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----D----L-----STPGGRETAVAAVLDRCGGVLDGL 66 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----C----T-----TSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----c----c-----cCCcccHHHHHHHHHHcCCCccEE
Confidence 478999995 899999999999999999988654332110 0 1 11234455666666654 89998
Q ss_pred EeCCCc
Q 009316 148 HPGYGF 153 (537)
Q Consensus 148 ~pg~g~ 153 (537)
+-.-|.
T Consensus 67 i~~Ag~ 72 (255)
T 2dkn_A 67 VCCAGV 72 (255)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 865443
No 164
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=84.64 E-value=2.8 Score=40.75 Aligned_cols=71 Identities=11% Similarity=0.010 Sum_probs=47.0
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
++|||.|. |.++..+++.+.+.|++|+++........ ..+.+ +.+. .+..+.+.+.++.++.++|.|+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~-------~Dl~~~~~~~~~~~~~~~d~vi 71 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR--ENVPKGVPFFR-------VDLRDKEGVERAFREFRPTHVS 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG--GGSCTTCCEEC-------CCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch--hhcccCeEEEE-------CCCCCHHHHHHHHHhcCCCEEE
Confidence 37999995 99999999999999999998853221111 11111 1221 1356777777777766899887
Q ss_pred eCC
Q 009316 149 PGY 151 (537)
Q Consensus 149 pg~ 151 (537)
-.-
T Consensus 72 ~~a 74 (311)
T 2p5y_A 72 HQA 74 (311)
T ss_dssp ECC
T ss_pred ECc
Confidence 443
No 165
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=84.48 E-value=1.6 Score=42.02 Aligned_cols=63 Identities=8% Similarity=0.057 Sum_probs=46.5
Q ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 68 ~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...-++|||.|+ |.++..+++.+.+.|++|+++... ..+..+.+.+.++.+..++|+
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~~~d~ 66 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEKKPNV 66 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhcCCCE
Confidence 334689999995 999999999999999999888432 013566777877777668999
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-.-+
T Consensus 67 vih~A~ 72 (292)
T 1vl0_A 67 VINCAA 72 (292)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 885544
No 166
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=84.30 E-value=0.9 Score=44.26 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=30.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.++|||+|.|..|.+.++.+.+.|.+++++..+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4789999999999999999999999999986543
No 167
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=84.06 E-value=1.3 Score=43.20 Aligned_cols=91 Identities=15% Similarity=0.181 Sum_probs=50.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+| .|.++..+++.+.+. +++++.+..............+ . .+-.+...-+.+.+++++ ++|+|+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~ge-l--~g~~~gv~v~~dl~~ll~-----~~DVVI 78 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGA-F--LGKQTGVALTDDIERVCA-----EADYLI 78 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTT-T--TTCCCSCBCBCCHHHHHH-----HCSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHH-H--hCCCCCceecCCHHHHhc-----CCCEEE
Confidence 57899999 899999999998765 7888876533221111111100 0 000011123566666654 378877
Q ss_pred eCCCccccc--HHHHHHHHHCCCcee
Q 009316 149 PGYGFLAEN--AVFVEMCREHGINFI 172 (537)
Q Consensus 149 pg~g~lsE~--~~~a~~~e~~Gl~~i 172 (537)
- |..-. ...+..|.+.|++++
T Consensus 79 D---fT~p~a~~~~~~~al~~G~~vV 101 (272)
T 4f3y_A 79 D---FTLPEGTLVHLDAALRHDVKLV 101 (272)
T ss_dssp E---CSCHHHHHHHHHHHHHHTCEEE
T ss_pred E---cCCHHHHHHHHHHHHHcCCCEE
Confidence 3 22111 345566777787653
No 168
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=83.90 E-value=0.19 Score=50.42 Aligned_cols=112 Identities=13% Similarity=0.093 Sum_probs=66.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
.++++|+|.|..+..+++.+.+.|+ +++++.+++... .+..+..+..+ +..+.+.+.++ .-.++|+++..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~~~~~~~i~g------d~~~~~~L~~a-~i~~a~~vi~~ 184 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK--VLRSGANFVHG------DPTRVSDLEKA-NVRGARAVIVD 184 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HHHTTCEEEES------CTTSHHHHHHT-CSTTEEEEEEC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HHhCCcEEEEe------CCCCHHHHHhc-ChhhccEEEEc
Confidence 3589999999999999999999999 888854443222 11123333343 34455555443 33568888876
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCC
Q 009316 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvp 198 (537)
.+-...|......+++.+ |+...+....|.... +.++++|+.
T Consensus 185 ~~~d~~n~~~~~~ar~~~-----~~~~iiar~~~~~~~-~~l~~~G~d 226 (336)
T 1lnq_A 185 LESDSETIHCILGIRKID-----ESVRIIAEAERYENI-EQLRMAGAD 226 (336)
T ss_dssp CSSHHHHHHHHHHHHTTC-----TTSEEEEECSSGGGH-HHHHHTTCS
T ss_pred CCccHHHHHHHHHHHHHC-----CCCeEEEEECCHHHH-HHHHHcCCC
Confidence 653333444455555553 332333444554443 456678766
No 169
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=83.71 E-value=6 Score=37.49 Aligned_cols=71 Identities=15% Similarity=0.080 Sum_probs=46.4
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~-----~~ 143 (537)
+.|++||.| .+.++..+++.+.+.|++++++..+.+.... -..+.. +..|.+.+.+++++ .+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~-------Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----FLAVKC-------DITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEEC-------CTTSHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----ceEEEe-------cCCCHHHHHHHHHHHHHHcCC
Confidence 357899999 5789999999999999999988765443221 122332 24455555544433 25
Q ss_pred CCEEEeCCC
Q 009316 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~pg~g 152 (537)
+|.++-.-|
T Consensus 88 iD~lv~nAg 96 (253)
T 2nm0_A 88 VEVLIANAG 96 (253)
T ss_dssp CSEEEEECS
T ss_pred CCEEEECCC
Confidence 798875444
No 170
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.47 E-value=2 Score=46.07 Aligned_cols=110 Identities=13% Similarity=0.083 Sum_probs=70.8
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~ 151 (537)
++++|+|.|..+..+++.+.+.|+++++++.+++..... ...+ .+ +..+.+. ++.+--.++|+++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~----~~~i-~g------D~t~~~~-L~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCND----HVVV-YG------DATVGQT-LRQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS----SCEE-ES------CSSSSTH-HHHHTTTSCSEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc----CCEE-Ee------CCCCHHH-HHhcCccccCEEEEEC
Confidence 889999999999999999999999999998776654322 2333 33 2333333 4445556799999887
Q ss_pred CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCC
Q 009316 152 GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 152 g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
+...+|......+++.|. ....+.+..|.... +.++++|+..
T Consensus 417 ~~d~~ni~~~~~ak~l~~-----~~~iiar~~~~~~~-~~l~~~G~d~ 458 (565)
T 4gx0_A 417 NDDSTNIFLTLACRHLHS-----HIRIVARANGEENV-DQLYAAGADF 458 (565)
T ss_dssp SCHHHHHHHHHHHHHHCS-----SSEEEEEESSTTSH-HHHHHHTCSE
T ss_pred CCchHHHHHHHHHHHHCC-----CCEEEEEECCHHHH-HHHHHcCCCE
Confidence 754445445555555543 32333444444433 3466777764
No 171
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=83.43 E-value=3.5 Score=40.35 Aligned_cols=28 Identities=18% Similarity=0.211 Sum_probs=24.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCV 98 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v 98 (537)
.+||+|+|. |..+..+++.+++.|++++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v 35 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIV 35 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEE
Confidence 478999996 8889999999999999855
No 172
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=83.33 E-value=1.7 Score=43.85 Aligned_cols=145 Identities=12% Similarity=0.094 Sum_probs=82.6
Q ss_pred CCCCCCEEEEEcCcHHHHHHHHHHH-H-cCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 67 VTCRQEKILVANRGEIAVRVIRTAH-E-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 67 ~~~~~~~iLI~~~g~ia~~ii~aa~-~-~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
..++..||.|+|.|.++...++++. + -|++++++++ .+... ...++++. + .....|.+.+++++ ...+
T Consensus 19 ~~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d-~~~~~-~~~~a~~~---g--~~~~~~~~~~~ll~---~~~~ 88 (357)
T 3ec7_A 19 FQGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCD-IVAGR-AQAALDKY---A--IEAKDYNDYHDLIN---DKDV 88 (357)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEEC-SSTTH-HHHHHHHH---T--CCCEEESSHHHHHH---CTTC
T ss_pred cCCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEe-CCHHH-HHHHHHHh---C--CCCeeeCCHHHHhc---CCCC
Confidence 3444568999999999999999998 4 3788887763 22221 12222210 0 00123566666653 4569
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCC--CCCCCcCCCCHHHHHHHH
Q 009316 145 TMLHPGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPT--VPGSDGLLQSTEEAVKLA 217 (537)
Q Consensus 145 d~V~pg~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpv--p~~~~~~v~~~~~~~~~~ 217 (537)
|+|+-... ...+.+.+..+.+.|..++. .+.+..+ .+.+++++.|+.+ +.+..........+.+..
T Consensus 89 D~V~i~tp-~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~------~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i 161 (357)
T 3ec7_A 89 EVVIITAS-NEAHADVAVAALNANKYVFCEKPLAVTAADCQ------RVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNII 161 (357)
T ss_dssp CEEEECSC-GGGHHHHHHHHHHTTCEEEEESSSCSSHHHHH------HHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHH
T ss_pred CEEEEcCC-cHHHHHHHHHHHHCCCCEEeecCccCCHHHHH------HHHHHHHHhCCeEEEEeecccCCHHHHHHHHHH
Confidence 99886542 22446777788888987653 2333332 3445677888876 222112222345556655
Q ss_pred Hh--cCCcEEEee
Q 009316 218 DE--LGFPVMIKA 228 (537)
Q Consensus 218 ~~--ig~PvvvKp 228 (537)
++ +|-+..+..
T Consensus 162 ~~g~iG~i~~v~~ 174 (357)
T 3ec7_A 162 DSGEIGQPLMVHG 174 (357)
T ss_dssp HHTTTCSEEEEEE
T ss_pred hcCCCCCeEEEEE
Confidence 53 777776654
No 173
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=83.26 E-value=4.5 Score=38.86 Aligned_cols=62 Identities=10% Similarity=0.026 Sum_probs=45.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
+||||.|. |.++..+++.+. .|++|+++..... .+ ..+..|.+.+.++.+..++|+|+-.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~-------~~D~~d~~~~~~~~~~~~~d~vih~ 61 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EF-------CGDFSNPKGVAETVRKLRPDVIVNA 61 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SS-------CCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cc-------cccCCCHHHHHHHHHhcCCCEEEEC
Confidence 37999995 999999999999 8999998853321 11 1245677788888777689988755
Q ss_pred CC
Q 009316 151 YG 152 (537)
Q Consensus 151 ~g 152 (537)
-+
T Consensus 62 a~ 63 (299)
T 1n2s_A 62 AA 63 (299)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 174
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=83.21 E-value=1.5 Score=43.00 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=27.5
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHc-CCcEEEEecC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEM-GIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~-Gi~~v~v~~~ 103 (537)
++.||.|+| .|.++..+++++.+. +++++.+...
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~ 55 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVR 55 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 346899999 899999999998764 8888887643
No 175
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=83.07 E-value=3.3 Score=41.13 Aligned_cols=88 Identities=13% Similarity=0.024 Sum_probs=57.9
Q ss_pred CCCCCCCEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009316 66 KVTCRQEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 66 ~~~~~~~~iLI~~~g~ia~-~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~ 143 (537)
...|...||.|+|.|.++. ..++++++. +++++++.+ .+.... ....|.+.+++++.. ..
T Consensus 20 ~~~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d-~~~~~~---------------g~~~~~~~~~ll~~~--~~ 81 (330)
T 4ew6_A 20 FQSMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATAS-RHGTVE---------------GVNSYTTIEAMLDAE--PS 81 (330)
T ss_dssp CCCCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEEC-SSCCCT---------------TSEEESSHHHHHHHC--TT
T ss_pred cccCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEe-CChhhc---------------CCCccCCHHHHHhCC--CC
Confidence 3334445899999999998 689999887 788888863 332210 111366777765431 56
Q ss_pred CCEEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 144 CTMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 144 ~d~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
+|+|+-... ...+.+.+..+.+.|..++
T Consensus 82 vD~V~i~tp-~~~H~~~~~~al~aGkhVl 109 (330)
T 4ew6_A 82 IDAVSLCMP-PQYRYEAAYKALVAGKHVF 109 (330)
T ss_dssp CCEEEECSC-HHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeCC-cHHHHHHHHHHHHcCCcEE
Confidence 999886542 2234667777788888766
No 176
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=83.05 E-value=2.4 Score=44.24 Aligned_cols=148 Identities=15% Similarity=0.080 Sum_probs=86.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCE-------EEEcCC---------CCCCCCCCCHHH
Q 009316 72 EKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADE-------SVCIGE---------APSSQSYLLIPN 134 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~-------~~~i~~---------~~~~~sy~~~~~ 134 (537)
-||.|+|.|.++..+++.+.+. |+++++|.+ .+... ....+.+ ...+.. .....-|.|.++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D-~~~er-a~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ee 101 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSA-RRLPN-TFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDL 101 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEEC-SSTHH-HHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEe-CCHHH-HHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHH
Confidence 5899999999999999888775 788888863 22211 1111100 000000 000112566666
Q ss_pred HHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHH
Q 009316 135 VLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAV 214 (537)
Q Consensus 135 i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~ 214 (537)
++ ....+|+|+-..+...-..+.+..+.++|..++.-+.+.. ...=..+.++++++|+..-..+........++.
T Consensus 102 LL---~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~--~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~eLv 176 (446)
T 3upl_A 102 IL---SNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEAD--VTIGPYLKAQADKQGVIYSLGAGDEPSSCMELI 176 (446)
T ss_dssp HH---TCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHH--HHHHHHHHHHHHHHTCCEEECTTSHHHHHHHHH
T ss_pred Hh---cCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccC--HHHHHHHHHHHHHhCCeeeecCCcchHHHHHHH
Confidence 54 3456999985443211235677788889998874344322 223456777889999876332101112245778
Q ss_pred HHHHhcCCcEEE
Q 009316 215 KLADELGFPVMI 226 (537)
Q Consensus 215 ~~~~~ig~Pvvv 226 (537)
+++...||.+|.
T Consensus 177 ~~a~~~G~~~v~ 188 (446)
T 3upl_A 177 EFVSALGYEVVS 188 (446)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHhCCCeEEE
Confidence 889999998765
No 177
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=82.95 E-value=2.8 Score=42.20 Aligned_cols=75 Identities=11% Similarity=0.034 Sum_probs=47.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~G-i~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
+++|||.|. |.++..+++.+.+.| ++|+++...................+. .+..+.+.+.++.+ ++|+|+
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~-----~Dl~d~~~l~~~~~--~~d~Vi 104 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSE-----TSITDDALLASLQD--EYDYVF 104 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEEC-----SCTTCHHHHHHCCS--CCSEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEE-----CCCCCHHHHHHHhh--CCCEEE
Confidence 478999995 999999999999999 999988644332211111011111111 24566676666554 799887
Q ss_pred eCCC
Q 009316 149 PGYG 152 (537)
Q Consensus 149 pg~g 152 (537)
-.-+
T Consensus 105 h~A~ 108 (377)
T 2q1s_A 105 HLAT 108 (377)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 5444
No 178
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=82.67 E-value=5.6 Score=37.50 Aligned_cols=77 Identities=16% Similarity=0.130 Sum_probs=48.4
Q ss_pred CCEEEEE--cCcHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccC----EEEEcCCCCCCCCCCC----HHHHHHH
Q 009316 71 QEKILVA--NRGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLL----IPNVLSA 138 (537)
Q Consensus 71 ~~~iLI~--~~g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad----~~~~i~~~~~~~sy~~----~~~i~~~ 138 (537)
++||+|+ |.|..+..+++++.+. ++++++|.++.+. ......|. ..+.+. ..++.+ -+++++.
T Consensus 22 ~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~-~~~~~~A~~~gIp~~~~~----~~~~~~r~~~~~~~~~~ 96 (229)
T 3auf_A 22 MIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRAD-AYGLERARRAGVDALHMD----PAAYPSRTAFDAALAER 96 (229)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTT-CHHHHHHHHTTCEEEECC----GGGSSSHHHHHHHHHHH
T ss_pred CcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCc-hHHHHHHHHcCCCEEEEC----cccccchhhccHHHHHH
Confidence 4688888 8999999999999876 6788888776432 22222222 122222 122333 3567788
Q ss_pred HHHcCCCEEEe-CCC
Q 009316 139 AISRGCTMLHP-GYG 152 (537)
Q Consensus 139 a~~~~~d~V~p-g~g 152 (537)
.++.++|.|+. +|+
T Consensus 97 l~~~~~Dliv~agy~ 111 (229)
T 3auf_A 97 LQAYGVDLVCLAGYM 111 (229)
T ss_dssp HHHTTCSEEEESSCC
T ss_pred HHhcCCCEEEEcChh
Confidence 88888997764 343
No 179
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=82.57 E-value=1.2 Score=42.21 Aligned_cols=76 Identities=8% Similarity=-0.093 Sum_probs=46.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hccCE-EEEcCCCCCCCCCCCHHHHHHHHHH-----
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADE-SVCIGEAPSSQSYLLIPNVLSAAIS----- 141 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~ad~-~~~i~~~~~~~sy~~~~~i~~~a~~----- 141 (537)
|.|++||.|. +.|+..+++.+.+.|+++++++.+.+...... ...+. .+.. +..|.+.+.+++++
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 73 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHG-------DVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEEC-------CTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEe-------eCCCHHHHHHHHHHHHHHc
Confidence 4578999994 78999999999999999998864332111101 11111 2322 24455555554443
Q ss_pred cCCCEEEeCCC
Q 009316 142 RGCTMLHPGYG 152 (537)
Q Consensus 142 ~~~d~V~pg~g 152 (537)
.++|.++-.-|
T Consensus 74 g~id~lv~nAg 84 (247)
T 3dii_A 74 QRIDVLVNNAC 84 (247)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 27898886544
No 180
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=82.43 E-value=1.8 Score=40.36 Aligned_cols=73 Identities=11% Similarity=0.009 Sum_probs=47.9
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
++++|||.| .|.++..+++.+.+. |++++++..+.+... .....-+.+.. +..+.+.+.++.+ ++|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~-------D~~d~~~~~~~~~--~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KIGGEADVFIG-------DITDADSINPAFQ--GIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-HTTCCTTEEEC-------CTTSHHHHHHHHT--TCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-hcCCCeeEEEe-------cCCCHHHHHHHHc--CCCE
Confidence 468999999 599999999999999 899998864332110 00000112322 4567777877774 5898
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-.-|
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 875443
No 181
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=82.23 E-value=3.3 Score=41.26 Aligned_cols=76 Identities=7% Similarity=-0.145 Sum_probs=47.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCC--chhhcc-------CEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDA--LHVKLA-------DESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~--~~~~~a-------d~~~~i~~~~~~~sy~~~~~i~~~a~ 140 (537)
||+|||.| .|.++..+++.+.+.|++|+++....+... ....+. .....+ ..+..+.+.+.++.+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~ 75 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH-----YGDLSDTSNLTRILR 75 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEEC-----CCCSSCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEE-----ECCCCCHHHHHHHHH
Confidence 47899999 599999999999999999998864432210 000110 111111 124567788888887
Q ss_pred HcCCCEEEeCC
Q 009316 141 SRGCTMLHPGY 151 (537)
Q Consensus 141 ~~~~d~V~pg~ 151 (537)
..++|.|+-.-
T Consensus 76 ~~~~d~vih~A 86 (372)
T 1db3_A 76 EVQPDEVYNLG 86 (372)
T ss_dssp HHCCSEEEECC
T ss_pred hcCCCEEEECC
Confidence 76789887543
No 182
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=81.88 E-value=5 Score=42.60 Aligned_cols=86 Identities=19% Similarity=0.037 Sum_probs=56.5
Q ss_pred CCEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCc-----hhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 71 QEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDAL-----HVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa-~~~Gi~~v~v~~~~d~~~~-----~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
.||++|.+.+..+..+++.+ +++|++++.+.+....... ...+.++.+ + ..|...+.+.+++.++
T Consensus 303 Gkrv~i~gd~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~~~~~v~-~--------~~D~~el~~~i~~~~p 373 (511)
T 2xdq_B 303 GKKAVVFGDNTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVL-I--------TDDHTVVGDAIARVEP 373 (511)
T ss_dssp TCEEEEEECHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTSSEEE-E--------CCCHHHHHHHHHHHCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHhcCCcEE-E--------eCCHHHHHHHHHhcCC
Confidence 48999999999999999999 8999999887543222111 112234433 3 2357788888888889
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 145 TMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 145 d~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
|.++.+ ..-...+++.|++++
T Consensus 374 Dl~ig~-------~~~r~~a~k~gip~~ 394 (511)
T 2xdq_B 374 AAIFGT-------QMERHVGKRLNIPCG 394 (511)
T ss_dssp SEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CEEEec-------cchHHHHHhcCCCeE
Confidence 988842 122234456677653
No 183
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=81.66 E-value=6.7 Score=38.42 Aligned_cols=74 Identities=9% Similarity=-0.019 Sum_probs=48.3
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-c----cC--EEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L----AD--ESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~----ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~~ 143 (537)
++|||.|. |.++..+++.+.+.|++|+++............ + .. +.+.. +..+.+.+.++.+..+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~~~~~~~~~~~~~~ 73 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEG-------DIRNEALMTEILHDHA 73 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEEC-------CTTCHHHHHHHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEc-------cCCCHHHHHHHhhccC
Confidence 37999994 999999999999999999988532221111110 0 11 22322 3567777877777668
Q ss_pred CCEEEeCCC
Q 009316 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~pg~g 152 (537)
+|+|+-.-|
T Consensus 74 ~D~vih~A~ 82 (338)
T 1udb_A 74 IDTVIHFAG 82 (338)
T ss_dssp CSEEEECCS
T ss_pred CCEEEECCc
Confidence 998875433
No 184
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=81.43 E-value=16 Score=34.72 Aligned_cols=118 Identities=8% Similarity=0.016 Sum_probs=62.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCc---hhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE-
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL---HVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM- 146 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~---~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~- 146 (537)
-++|+|+|.|..+..+++.+.+.|+..+.+. |.|.-.. ..++--..-.+| ....+.+.+.+++.+.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lv-D~d~v~~sNL~Rq~l~~~~diG-------~~Ka~~~~~~l~~~np~~~ 99 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLA-DDDDVHLSNLQRQILFTTEDID-------RPKSQVSQQRLTQLNPDIQ 99 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEE-CCCBCCGGGTTTCTTCCGGGTT-------SBHHHHHHHHHHHHCTTSE
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEE-eCCCcccccCCCCccCChhhCC-------CHHHHHHHHHHHHHCCCCE
Confidence 3689999999999999999999999766554 3332211 111100000022 123455666666555442
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
|..-...+.+ ..+.+.+...-+.+-..+.. . .|....+.+.+.|+|....
T Consensus 100 v~~~~~~~~~-~~~~~~~~~~DvVi~~~d~~--~---~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 100 LTALQQRLTG-EALKDAVARADVVLDCTDNM--A---TRQEINAACVALNTPLITA 149 (251)
T ss_dssp EEEECSCCCH-HHHHHHHHHCSEEEECCSSH--H---HHHHHHHHHHHTTCCEEEE
T ss_pred EEEEeccCCH-HHHHHHHhcCCEEEECCCCH--H---HHHHHHHHHHHhCCCEEEE
Confidence 2211112222 23445556665554332211 1 2456666777888886543
No 185
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=81.38 E-value=2.5 Score=44.76 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=60.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc----cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL----ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~----ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
.||+.|.+.+..+..+++.++++|++++.+.+.........++ .+..+.++ -.|...+.+.+++.++|.
T Consensus 348 GKrv~i~g~~~~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~~~~~~~i~~-------~~d~~el~~~i~~~~pDL 420 (492)
T 3u7q_A 348 GKRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYD-------DVTGYEFEEFVKRIKPDL 420 (492)
T ss_dssp TCEEEECBSSSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTTSCTTCEEEE-------SCBHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHhCCCCcEEEc-------CCCHHHHHHHHHhcCCcE
Confidence 4899999988889999999999999999876543211111111 12222221 246888999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcee
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
++.+. .-....++.|++++
T Consensus 421 ~ig~~-------~~~~ia~k~gIP~~ 439 (492)
T 3u7q_A 421 IGSGI-------KEKFIFQKMGIPFR 439 (492)
T ss_dssp EEECH-------HHHHHHHHTTCCEE
T ss_pred EEeCc-------chhHHHHHcCCCEE
Confidence 99542 22356778899986
No 186
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=81.30 E-value=3 Score=39.77 Aligned_cols=75 Identities=8% Similarity=0.077 Sum_probs=46.9
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-ccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~ad~~~~i~~~~~~~sy~~~~~i~~~a~~-----~~ 143 (537)
.|++||.|. +.|+..+++.+.+.|++|++++.+.+....... ..-..+.. +..+.+.+.+++++ .+
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYG-------DFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEEC-------CTTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEEC-------CCCCHHHHHHHHHHHHHhcCC
Confidence 478999994 789999999999999999998755432111111 11123332 24455555444433 26
Q ss_pred CCEEEeCCC
Q 009316 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~pg~g 152 (537)
+|.++-.-|
T Consensus 100 iD~lv~nAg 108 (260)
T 3gem_A 100 LRAVVHNAS 108 (260)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 898886544
No 187
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=81.22 E-value=5.5 Score=39.12 Aligned_cols=75 Identities=4% Similarity=-0.074 Sum_probs=45.3
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcC-------CcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMG-------IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~G-------i~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~ 141 (537)
+.++|||.| .|.++..+++.+.+.| ++++++....+.... ........+. .+..+.+.+.++.+
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~-----~Dl~d~~~~~~~~~- 84 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARA-----ADLSAPGEAEKLVE- 84 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEE-----CCTTSTTHHHHHHH-
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEE-----cCCCCHHHHHHHHh-
Confidence 346899999 5999999999999999 788888654332211 0111221111 12334445555443
Q ss_pred cCCCEEEeCCC
Q 009316 142 RGCTMLHPGYG 152 (537)
Q Consensus 142 ~~~d~V~pg~g 152 (537)
.++|+|+-.-+
T Consensus 85 ~~~d~vih~A~ 95 (342)
T 2hrz_A 85 ARPDVIFHLAA 95 (342)
T ss_dssp TCCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 47998875443
No 188
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=81.15 E-value=1.8 Score=40.30 Aligned_cols=73 Identities=11% Similarity=0.098 Sum_probs=45.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCC--cEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGI--PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi--~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
.|+|||.| .|.++..+++.+.+.|+ +++++..+.+.........-..+.. +..+.+.+.++. .++|.|
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~--~~~d~v 88 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVV-------DFEKLDDYASAF--QGHDVG 88 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEEC-------CGGGGGGGGGGG--SSCSEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEec-------CcCCHHHHHHHh--cCCCEE
Confidence 47899999 58999999999999999 8998876554322111001122222 233334444443 268988
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-.-|
T Consensus 89 i~~ag 93 (242)
T 2bka_A 89 FCCLG 93 (242)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86554
No 189
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=81.11 E-value=6.5 Score=39.49 Aligned_cols=74 Identities=15% Similarity=0.048 Sum_probs=49.5
Q ss_pred CEEEEEc-CcHHHHHHHHHHH-HcCCcEEEEecCCCCC--------Cchhh-----c-------c---CEEEEcCCCCCC
Q 009316 72 EKILVAN-RGEIAVRVIRTAH-EMGIPCVAVYSTIDKD--------ALHVK-----L-------A---DESVCIGEAPSS 126 (537)
Q Consensus 72 ~~iLI~~-~g~ia~~ii~aa~-~~Gi~~v~v~~~~d~~--------~~~~~-----~-------a---d~~~~i~~~~~~ 126 (537)
|+|||.| .|.++..+++.+. +.|++|+++....+.. ..... + . -+.+..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 76 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVG------ 76 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEES------
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEEC------
Confidence 4899999 5999999999999 9999999886543321 01110 0 0 122322
Q ss_pred CCCCCHHHHHHHHHHcC-CCEEEeCCC
Q 009316 127 QSYLLIPNVLSAAISRG-CTMLHPGYG 152 (537)
Q Consensus 127 ~sy~~~~~i~~~a~~~~-~d~V~pg~g 152 (537)
+..+.+.+.++.++.+ +|.|+-.-+
T Consensus 77 -Dl~d~~~~~~~~~~~~~~d~vih~A~ 102 (397)
T 1gy8_A 77 -DVRNEDFLNGVFTRHGPIDAVVHMCA 102 (397)
T ss_dssp -CTTCHHHHHHHHHHSCCCCEEEECCC
T ss_pred -CCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 4567778888777767 998875544
No 190
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=81.11 E-value=3.6 Score=40.83 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=33.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD 107 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~ 107 (537)
|.+||+++|..+.++..++++.+.|+++++|.+.+|..
T Consensus 1 ~~mrivf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~ 38 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRP 38 (314)
T ss_dssp CCCEEEEEECSGGGHHHHHHHHHSSSEEEEEECCCC--
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCCCc
Confidence 34699999999999999999999999999999877754
No 191
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=80.96 E-value=1.8 Score=41.47 Aligned_cols=81 Identities=11% Similarity=0.032 Sum_probs=46.5
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH--cCCCE
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS--RGCTM 146 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~--~~~d~ 146 (537)
|-|+|||.| .+.|+..+++.+.+.|.+|++++.+.+......+.......+. .+..+..+++++++.+.+ -++|.
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~--~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFH--GDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEE--CCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEE--ecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 458899999 4779999999999999999998754332111111111122221 112223344455544433 36898
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
++-.-|
T Consensus 79 LVNNAG 84 (247)
T 3ged_A 79 LVNNAC 84 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 885543
No 192
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=80.89 E-value=10 Score=35.57 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=47.5
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009316 73 KILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 73 ~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~ 151 (537)
+|||.| .|.++..+++.+.+ |++|+++....+.. .. +.. +..+.+.+.++.+..++|.|+-.-
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------~~-~~~-------Dl~~~~~~~~~~~~~~~d~vi~~a 65 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------GG-YKL-------DLTDFPRLEDFIIKKRPDVIINAA 65 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------TC-EEC-------CTTSHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------CC-cee-------ccCCHHHHHHHHHhcCCCEEEECC
Confidence 699999 59999999999985 99999887554321 11 332 466778888887766899888655
Q ss_pred Cc
Q 009316 152 GF 153 (537)
Q Consensus 152 g~ 153 (537)
|.
T Consensus 66 ~~ 67 (273)
T 2ggs_A 66 AM 67 (273)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 193
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=80.85 E-value=10 Score=36.95 Aligned_cols=109 Identities=15% Similarity=0.045 Sum_probs=58.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
..||+|+|. |.++..+++.+++.|++++... ++.... ....... -|.+++++.+ +..+|+++-
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V-~p~~~g--~~~~G~~----------vy~sl~el~~---~~~~D~viI 70 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV-TPGKGG--TTHLGLP----------VFNTVREAVA---ATGATASVI 70 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTT--CEETTEE----------EESSHHHHHH---HHCCCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-CCCccc--ceeCCee----------ccCCHHHHhh---cCCCCEEEE
Confidence 468999997 9999999999999999855332 332110 0011111 2455555433 346777663
Q ss_pred CCCcccccHHHHHHHHHCCCce--eCCCHHHHHHhcCHHHHHHHHHHcCCCC
Q 009316 150 GYGFLAENAVFVEMCREHGINF--IGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~--iGp~~~~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
..-. ....+..+.|.+.|++. +.+.--.. .+...+.+.+++.|+.+
T Consensus 71 ~tP~-~~~~~~~~ea~~~Gi~~iVi~t~G~~~---~~~~~l~~~A~~~gv~l 118 (288)
T 2nu8_A 71 YVPA-PFCKDSILEAIDAGIKLIITITEGIPT---LDMLTVKVKLDEAGVRM 118 (288)
T ss_dssp CCCG-GGHHHHHHHHHHTTCSEEEECCCCCCH---HHHHHHHHHHHHHTCEE
T ss_pred ecCH-HHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEE
Confidence 3211 12245666666777763 12210000 12345566666777643
No 194
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.81 E-value=3.7 Score=38.17 Aligned_cols=35 Identities=9% Similarity=0.162 Sum_probs=29.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcC--CcEEEEecCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMG--IPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~G--i~~v~v~~~~d 105 (537)
.|++||.| .|.++..+++.+.+.| ++++++..+.+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~ 40 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVE 40 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGG
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHH
Confidence 57899999 5889999999999999 99998865443
No 195
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=80.55 E-value=4.9 Score=37.50 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=47.0
Q ss_pred CCEEEEE--cCcHHHHHHHHHHHHcCC--cEEEEecCCCCCCchhhccC----EEEEcCCCCCCCCCCC----HHHHHHH
Q 009316 71 QEKILVA--NRGEIAVRVIRTAHEMGI--PCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLL----IPNVLSA 138 (537)
Q Consensus 71 ~~~iLI~--~~g~ia~~ii~aa~~~Gi--~~v~v~~~~d~~~~~~~~ad----~~~~i~~~~~~~sy~~----~~~i~~~ 138 (537)
|+||+|+ |.|..+..+++++.+.++ ++++|.++.+.. .....|. ..+.+.+ .++.+ -+++++.
T Consensus 1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~-~~~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~ 75 (216)
T 2ywr_A 1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKA-YAIERCKKHNVECKVIQR----KEFPSKKEFEERMALE 75 (216)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTC-HHHHHHHHHTCCEEECCG----GGSSSHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCh-HHHHHHHHcCCCEEEeCc----ccccchhhhhHHHHHH
Confidence 3688888 899999999999998887 788887765432 2222222 1222221 22333 3567777
Q ss_pred HHHcCCCEEEe
Q 009316 139 AISRGCTMLHP 149 (537)
Q Consensus 139 a~~~~~d~V~p 149 (537)
.++.++|.|+.
T Consensus 76 l~~~~~Dliv~ 86 (216)
T 2ywr_A 76 LKKKGVELVVL 86 (216)
T ss_dssp HHHTTCCEEEE
T ss_pred HHhcCCCEEEE
Confidence 77888887664
No 196
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=80.51 E-value=3.8 Score=42.86 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=47.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh------h-c--cCEEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV------K-L--ADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~------~-~--ad~~~~i~~~~~~~sy~~~~~i~~~a~~ 141 (537)
.||++|.+.+..+..+++.++++|++++.+.+......... . . .+..+.. -.|...+.+++++
T Consensus 312 gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~--------~~d~~~l~~~i~~ 383 (458)
T 1mio_B 312 GKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKV--------EGDFFDVHQWIKN 383 (458)
T ss_dssp TCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEE--------SCBHHHHHHHHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEE--------CCCHHHHHHHHHh
Confidence 48999999999999999999999999998765442111000 0 1 1112222 1466677777777
Q ss_pred cCCCEEEeC
Q 009316 142 RGCTMLHPG 150 (537)
Q Consensus 142 ~~~d~V~pg 150 (537)
.++|.++.+
T Consensus 384 ~~pDl~ig~ 392 (458)
T 1mio_B 384 EGVDLLISN 392 (458)
T ss_dssp SCCSEEEES
T ss_pred cCCCEEEeC
Confidence 778877744
No 197
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=80.44 E-value=7.4 Score=37.15 Aligned_cols=71 Identities=17% Similarity=0.135 Sum_probs=46.9
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-----~~ 144 (537)
.|+|||.|. +.|+..+++.+.+.|+++++++.+.+.... .-..+.+ +..|.+.+.+++++. ++
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~-------Dv~~~~~v~~~~~~~~~~~g~i 82 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN----VSDHFKI-------DVTNEEEVKEAVEKTTKKYGRI 82 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT----SSEEEEC-------CTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC----ceeEEEe-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 589999995 779999999999999999988755443211 1123333 245555555554432 78
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|.++-.-|
T Consensus 83 D~lv~nAg 90 (269)
T 3vtz_A 83 DILVNNAG 90 (269)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98886544
No 198
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=80.41 E-value=2.3 Score=44.95 Aligned_cols=88 Identities=13% Similarity=0.161 Sum_probs=58.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh----hccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV----KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~----~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
.||+.|.+.+..+..+++.++++|++++.+.+......... .+.+..+.+ +-.|...+.+.+++.++|.
T Consensus 332 GKrv~i~~~~~~~~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~l~~~~~i~-------~d~d~~el~~~i~~~~pDL 404 (483)
T 3pdi_A 332 GKRVLLYTGGVKSWSVVSALQDLGMKVVATGTKKSTEEDKARIRELMGDDVKML-------DEGNARVLLKTVDEYQADI 404 (483)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHHSCSSCCBC-------CSCSHHHHHHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHhcCCCCEEE-------eCCCHHHHHHHHHhcCCCE
Confidence 48999999888899999999999999998754321110000 111222212 2246888999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcee
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
++.+. .+ ....++.|++++
T Consensus 405 ~ig~~---~~----~~~a~k~gIP~~ 423 (483)
T 3pdi_A 405 LIAGG---RN----MYTALKGRVPFL 423 (483)
T ss_dssp EECCG---GG----HHHHHHTTCCBC
T ss_pred EEECC---ch----hHHHHHcCCCEE
Confidence 99542 12 234567888875
No 199
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=80.33 E-value=6.4 Score=37.73 Aligned_cols=64 Identities=9% Similarity=0.003 Sum_probs=45.2
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
+++++|||.| .|.++..+++.+.+.|+ ... .....+. ....+..|.+.+.++.+..++|+|
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~~---------~~~~~~~--~~~~D~~d~~~~~~~~~~~~~d~V 65 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG-------LPG---------EDWVFVS--SKDADLTDTAQTRALFEKVQPTHV 65 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC-------CTT---------CEEEECC--TTTCCTTSHHHHHHHHHHSCCSEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC-------ccc---------ccccccC--ceecccCCHHHHHHHHhhcCCCEE
Confidence 4578999999 49999999999999998 000 0111111 122356788889999888889988
Q ss_pred EeC
Q 009316 148 HPG 150 (537)
Q Consensus 148 ~pg 150 (537)
+=.
T Consensus 66 ih~ 68 (319)
T 4b8w_A 66 IHL 68 (319)
T ss_dssp EEC
T ss_pred EEC
Confidence 744
No 200
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=80.26 E-value=11 Score=35.75 Aligned_cols=70 Identities=11% Similarity=0.058 Sum_probs=46.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RGC 144 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~-----~~~ 144 (537)
.|++||.| .+.++..+++.+.+.|++++++..+.+... . -..+.. +..|.+.+.+++++ .++
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~--~~~~~~-------Dl~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEA---K--YDHIEC-------DVTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSC---S--SEEEEC-------CTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCC---c--eEEEEe-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999 578999999999999999998875544310 0 122322 24455555554443 269
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|.++-.-|
T Consensus 76 D~lv~~Ag 83 (264)
T 2dtx_A 76 SVLVNNAG 83 (264)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886544
No 201
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=80.08 E-value=16 Score=37.68 Aligned_cols=88 Identities=9% Similarity=0.140 Sum_probs=56.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCC-chhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDA-LHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~-~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
.|||+|+|-|..+...++.+++.|++|+..++...... .... ....+..+ ..+.+.+ + ++|.|+-
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g-------~~~~~~~-----~-~~d~vV~ 70 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTG-------SLNDEWL-----M-AADLIVA 70 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEES-------SCCHHHH-----H-TCSEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEEC-------CCcHHHh-----c-cCCEEEe
Confidence 36899999999999999999999999999876443321 1122 23333333 1122222 2 6899887
Q ss_pred CCCcccccHHHHHHHHHCCCceeC
Q 009316 150 GYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
..|....++.+ ..+.+.|+++++
T Consensus 71 s~gi~~~~p~~-~~a~~~~~~v~~ 93 (439)
T 2x5o_A 71 SPGIALAHPSL-SAAADAGIEIVG 93 (439)
T ss_dssp CTTSCTTCHHH-HHHHHTTCEEEC
T ss_pred CCCCCCCCHHH-HHHHHCCCcEEE
Confidence 77754455544 344567898874
No 202
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=79.89 E-value=2.7 Score=41.11 Aligned_cols=117 Identities=12% Similarity=0.160 Sum_probs=69.0
Q ss_pred CCCEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~-ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
++.||.|+|.|.++.. .++.+++. |++++++++ .+.. ....++++ +-+ ..|.+.+++++ .+|+|
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~a~~-~~~------~~~~~~~~ll~-----~~D~V 70 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFT-PNKV-KREKICSD-YRI------MPFDSIESLAK-----KCDCI 70 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEEC-SCHH-HHHHHHHH-HTC------CBCSCHHHHHT-----TCSEE
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEEC-CCHH-HHHHHHHH-cCC------CCcCCHHHHHh-----cCCEE
Confidence 3568999999999986 88888874 788887763 2211 11122221 101 12778887776 69998
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
+-... ...+.+.+..+.+.|.+++--.|-+.. ..+=..+.+.+++.|+..--+
T Consensus 71 ~i~tp-~~~h~~~~~~al~~gk~vl~EKP~~~~-~~~~~~l~~~a~~~g~~~~v~ 123 (308)
T 3uuw_A 71 FLHSS-TETHYEIIKILLNLGVHVYVDKPLAST-VSQGEELIELSTKKNLNLMVG 123 (308)
T ss_dssp EECCC-GGGHHHHHHHHHHTTCEEEECSSSSSS-HHHHHHHHHHHHHHTCCEEEC
T ss_pred EEeCC-cHhHHHHHHHHHHCCCcEEEcCCCCCC-HHHHHHHHHHHHHcCCEEEEe
Confidence 86542 223466777777888876532121111 111122445677788876544
No 203
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=79.62 E-value=5.6 Score=37.29 Aligned_cols=76 Identities=12% Similarity=-0.013 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccC-EEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad-~~~~i~~~~~~~sy~~~~~i~~~a~~~-~~d~ 146 (537)
..|++||.|. |.++..+++.+.+.|++++++..+.+.......+.. ..+.. +..+.+.+.++.++. ++|.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 77 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL-------DVTKKKQIDQFANEVERLDV 77 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEEC-------CTTCHHHHHHHHHHCSCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEe-------eCCCHHHHHHHHHHhCCCCE
Confidence 3578999994 789999999999999999988644321111111111 12222 355677776666654 6898
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
++-.-|
T Consensus 78 lv~~Ag 83 (246)
T 2ag5_A 78 LFNVAG 83 (246)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 885544
No 204
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=79.48 E-value=13 Score=34.75 Aligned_cols=71 Identities=10% Similarity=0.029 Sum_probs=47.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-----~~ 144 (537)
.|++||.| .+.++..+++.+.+.|++++++..+.+.... . -..+.. +..|.+.+.+++++. ++
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~--~--~~~~~~-------D~~d~~~~~~~~~~~~~~~g~i 75 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY--P--FATEVM-------DVADAAQVAQVCQRLLAETERL 75 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCC--S--SEEEEC-------CTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcC--C--ceEEEc-------CCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999 4889999999999999999998755432111 1 122322 345566665555432 68
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|.++-.-|
T Consensus 76 d~lv~~Ag 83 (250)
T 2fwm_X 76 DALVNAAG 83 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98886544
No 205
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=79.35 E-value=4.7 Score=36.31 Aligned_cols=62 Identities=13% Similarity=0.097 Sum_probs=44.6
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEEEe
Q 009316 72 EKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTMLHP 149 (537)
Q Consensus 72 ~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-~~d~V~p 149 (537)
+|+||.| .|.++..+++.+. .|++++++..+.+ .+.. +..+.+.+.++.+.. ++|.|+-
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~-------D~~~~~~~~~~~~~~~~~d~vi~ 64 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTV-------DITNIDSIKKMYEQVGKVDAIVS 64 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEEC-------CTTCHHHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceee-------ecCCHHHHHHHHHHhCCCCEEEE
Confidence 3799999 5889999999999 9999998865432 1222 356677777766654 5888875
Q ss_pred CCC
Q 009316 150 GYG 152 (537)
Q Consensus 150 g~g 152 (537)
.-|
T Consensus 65 ~ag 67 (202)
T 3d7l_A 65 ATG 67 (202)
T ss_dssp CCC
T ss_pred CCC
Confidence 544
No 206
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=79.18 E-value=4.4 Score=39.38 Aligned_cols=76 Identities=12% Similarity=0.011 Sum_probs=46.9
Q ss_pred CCEEEEEcCc---HHHHHHHHHHHHcCCcEEEEecCCCCCCchhhcc-----CEEEEcCCCCCCCCCCCHHHHHHHHHH-
Q 009316 71 QEKILVANRG---EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA-----DESVCIGEAPSSQSYLLIPNVLSAAIS- 141 (537)
Q Consensus 71 ~~~iLI~~~g---~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~a-----d~~~~i~~~~~~~sy~~~~~i~~~a~~- 141 (537)
.|++||.|.+ .++..+++.+.+.|.+|++++.+.+.......+. -..+.+ +..|.+.+.+++++
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPC-------DVSDAESVDNMFKVL 102 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEEC-------CTTCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEc-------CCCCHHHHHHHHHHH
Confidence 4789999975 7999999999999999998865432111111110 123332 24455555554443
Q ss_pred ----cCCCEEEeCCCc
Q 009316 142 ----RGCTMLHPGYGF 153 (537)
Q Consensus 142 ----~~~d~V~pg~g~ 153 (537)
-++|.++-.-|.
T Consensus 103 ~~~~g~iD~lVnnAG~ 118 (296)
T 3k31_A 103 AEEWGSLDFVVHAVAF 118 (296)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 278988866554
No 207
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=79.17 E-value=5 Score=38.89 Aligned_cols=68 Identities=13% Similarity=0.055 Sum_probs=48.1
Q ss_pred EEEEEc-CcHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 73 KILVAN-RGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 73 ~iLI~~-~g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
||||.| .|.++..+++.+.+. |++|+++........ .-+.+.. +..|.+.+.++.++.++|+|+=
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~-------D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITL-------DVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEEC-------CTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEe-------cCCCHHHHHHHHhhcCCcEEEE
Confidence 589999 599999999999998 899998864433221 1122322 4667888888887778998875
Q ss_pred CCC
Q 009316 150 GYG 152 (537)
Q Consensus 150 g~g 152 (537)
.-+
T Consensus 69 ~a~ 71 (317)
T 3ajr_A 69 LAG 71 (317)
T ss_dssp CCC
T ss_pred CCc
Confidence 433
No 208
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=79.05 E-value=1.5 Score=40.29 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=28.4
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
+||||.|. |.++..+++.+.+.|++++++..+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999996 999999999999999999998654
No 209
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=78.98 E-value=8.6 Score=36.05 Aligned_cols=71 Identities=14% Similarity=0.043 Sum_probs=46.4
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~-----~~ 143 (537)
..|++||.| .+.++..+++.+.+.|++++++..+.+.... .. .+.+ +..+.+.+.++.++ .+
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~--~~~~-------D~~~~~~~~~~~~~~~~~~g~ 81 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LF--GVEV-------DVTDSDAVDRAFTAVEEHQGP 81 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---SE--EEEC-------CTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---hc--Ceec-------cCCCHHHHHHHHHHHHHHcCC
Confidence 357899999 5789999999999999999988755433211 11 1332 24455555544433 26
Q ss_pred CCEEEeCCC
Q 009316 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~pg~g 152 (537)
+|.++-.-|
T Consensus 82 id~lv~~Ag 90 (247)
T 1uzm_A 82 VEVLVSNAG 90 (247)
T ss_dssp CSEEEEECS
T ss_pred CCEEEECCC
Confidence 898885544
No 210
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=78.97 E-value=4.2 Score=42.42 Aligned_cols=115 Identities=10% Similarity=0.111 Sum_probs=67.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccC-----EEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-----ESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad-----~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d 145 (537)
+++|+|+|.|.++..+++.+.+.|++++++..+.+. ...+++ ..+.+ +..+.+.+.+++. ++|
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~---a~~la~~~~~~~~~~~-------Dv~d~~~l~~~l~--~~D 70 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLES---AKKLSAGVQHSTPISL-------DVNDDAALDAEVA--KHD 70 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHH---HHHTTTTCTTEEEEEC-------CTTCHHHHHHHHT--TSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHH---HHHHHHhcCCceEEEe-------ecCCHHHHHHHHc--CCc
Confidence 578999999999999999999999987776533221 111211 12222 2455666666553 799
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 009316 146 MLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 146 ~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
+|+-..+.. -+..++..+.+.|..++..... ......+.+.++++|+.+..+
T Consensus 71 vVIn~a~~~-~~~~i~~a~l~~g~~vvd~~~~----~~~~~~l~~aA~~aGv~~i~g 122 (450)
T 1ff9_A 71 LVISLIPYT-FHATVIKSAIRQKKHVVTTSYV----SPAMMELDQAAKDAGITVMNE 122 (450)
T ss_dssp EEEECCC---CHHHHHHHHHHHTCEEEESSCC----CHHHHHTHHHHHHTTCEEECS
T ss_pred EEEECCccc-cchHHHHHHHhCCCeEEEeecc----cHHHHHHHHHHHHCCCeEEeC
Confidence 998765532 1233455555566666532110 001123455678889887665
No 211
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=78.97 E-value=3.6 Score=40.99 Aligned_cols=142 Identities=15% Similarity=0.087 Sum_probs=81.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHH-H-cCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAH-E-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~-~-~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
|+.||.|+|.|.++...+++++ + -|++++++++ .+.. ....++++. + .....|.+.+++++ ...+|+|
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d-~~~~-~~~~~~~~~---g--~~~~~~~~~~~ll~---~~~~D~V 70 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTD-VNQE-AAQKVVEQY---Q--LNATVYPNDDSLLA---DENVDAV 70 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEEC-SSHH-HHHHHHHHT---T--CCCEEESSHHHHHH---CTTCCEE
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEc-CCHH-HHHHHHHHh---C--CCCeeeCCHHHHhc---CCCCCEE
Confidence 4568999999999999999998 5 4788887763 2211 111122110 0 00123566666554 4569998
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCC-CCCC-CcCCCCHHHHHHHHH--
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPT-VPGS-DGLLQSTEEAVKLAD-- 218 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpv-p~~~-~~~v~~~~~~~~~~~-- 218 (537)
+-..- ...+.+.+..+.+.|.+++- .+.+.. ..+.+++++.|+.+ --++ .........+.+..+
T Consensus 71 ~i~tp-~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~------~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~g 143 (344)
T 3mz0_A 71 LVTSW-GPAHESSVLKAIKAQKYVFCEKPLATTAEGC------MRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNH 143 (344)
T ss_dssp EECSC-GGGHHHHHHHHHHTTCEEEECSCSCSSHHHH------HHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHTT
T ss_pred EECCC-chhHHHHHHHHHHCCCcEEEcCCCCCCHHHH------HHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHcC
Confidence 86542 22346777778888987653 233332 23455677888876 2221 122223445566555
Q ss_pred hcCCcEEEee
Q 009316 219 ELGFPVMIKA 228 (537)
Q Consensus 219 ~ig~PvvvKp 228 (537)
.+|-+..+..
T Consensus 144 ~iG~i~~v~~ 153 (344)
T 3mz0_A 144 VIGEPLMIHC 153 (344)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCcEEEEE
Confidence 4677766654
No 212
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=78.92 E-value=2.5 Score=42.84 Aligned_cols=137 Identities=9% Similarity=0.032 Sum_probs=81.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCE--EEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADE--SVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~--~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
.++|+|+|.|.++..+++.+.+. +++.+.+.+.+. ...+++. .+.+ +..+.+.+.++++ ++|+|+
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~---a~~la~~~~~~~~-------d~~~~~~l~~ll~--~~DvVI 82 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNEN---LEKVKEFATPLKV-------DASNFDKLVEVMK--EFELVI 82 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHH---HHHHTTTSEEEEC-------CTTCHHHHHHHHT--TCSCEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHH---HHHHHhhCCeEEE-------ecCCHHHHHHHHh--CCCEEE
Confidence 47999999999999999999888 776655432221 1122222 1222 2346677777764 589988
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHH--HHHHHhcCCcEEE
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA--VKLADELGFPVMI 226 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~--~~~~~~ig~Pvvv 226 (537)
-...+. .+..+++.|.+.|..++-.+.. ..+-..+.+.++++|+.+.++. ........+ ...+++++ .--+
T Consensus 83 n~~P~~-~~~~v~~a~l~~G~~~vD~s~~----~~~~~~l~~~Ak~aG~~~l~g~-G~dPG~~~~~a~~~~~~~~-v~~i 155 (365)
T 2z2v_A 83 GALPGF-LGFKSIKAAIKSKVDMVDVSFM----PENPLELRDEAEKAQVTIVFDA-GFAPGLSNILMGRIFQELD-LKEG 155 (365)
T ss_dssp ECCCHH-HHHHHHHHHHHTTCCEEECCCC----SSCGGGGHHHHHHTTCEEECSC-BTTTBHHHHHHHHHHHHSC-EEEE
T ss_pred ECCChh-hhHHHHHHHHHhCCeEEEccCC----cHHHHHHHHHHHHcCCEEEECC-CCcchHHHHHHHHHHHhcC-CCEE
Confidence 763321 2345778888899887643321 1111245667889999887763 233334433 33445665 3334
Q ss_pred e
Q 009316 227 K 227 (537)
Q Consensus 227 K 227 (537)
+
T Consensus 156 ~ 156 (365)
T 2z2v_A 156 Y 156 (365)
T ss_dssp E
T ss_pred E
Confidence 4
No 213
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=78.90 E-value=8.2 Score=38.13 Aligned_cols=145 Identities=10% Similarity=0.106 Sum_probs=83.3
Q ss_pred CCEEEEEcCcHHHH-HHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAV-RVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~-~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
..||.|+|.|.++. .++++++..|+++++|++. +... ...++++. + ....|.+.+++++ ...+|+|+-
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~-~~~~-~~~~a~~~---~---~~~~~~~~~~ll~---~~~~D~V~i 72 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES-DSDN-RAKFTSLF---P---SVPFAASAEQLIT---DASIDLIAC 72 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS-CTTS-CHHHHHHS---T---TCCBCSCHHHHHT---CTTCCEEEE
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC-CHHH-HHHHHHhc---C---CCcccCCHHHHhh---CCCCCEEEE
Confidence 45899999988775 6778887789999888643 2221 11222211 0 1124677776653 356999986
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCC-C-HHHHHHHHH--hcCCcEE
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQ-S-TEEAVKLAD--ELGFPVM 225 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~-~-~~~~~~~~~--~ig~Pvv 225 (537)
..- ...+.+.+..+.+.|.+++.-.|-+.. ..+=..+.+.+++.|+..--++..... . ...+.+.++ .+|-+..
T Consensus 73 ~tp-~~~h~~~~~~al~aGkhVl~EKP~a~~-~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i~~g~iG~i~~ 150 (336)
T 2p2s_A 73 AVI-PCDRAELALRTLDAGKDFFTAKPPLTT-LEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQRGEIGRVIQ 150 (336)
T ss_dssp CSC-GGGHHHHHHHHHHTTCEEEECSSCCSC-HHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHHHTTTTSSEEE
T ss_pred eCC-hhhHHHHHHHHHHCCCcEEEeCCCCCC-HHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHHhCCCCCceEE
Confidence 542 123467777777889865533221111 111223455677888876544322222 2 456666665 5677776
Q ss_pred Eee
Q 009316 226 IKA 228 (537)
Q Consensus 226 vKp 228 (537)
+..
T Consensus 151 v~~ 153 (336)
T 2p2s_A 151 TMG 153 (336)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 214
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=78.79 E-value=2.5 Score=40.94 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=29.4
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
|||||.|+ |-++..+++.+.+.|++|+++..++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57999996 9999999999999999999986543
No 215
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=78.76 E-value=3.4 Score=41.24 Aligned_cols=79 Identities=13% Similarity=0.067 Sum_probs=51.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHH---HcCCC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAI---SRGCT 145 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~---~~~~d 145 (537)
..++|||.|.|.++..+++.|+.+|.+++++..+++......++ +|..+... +.....+++.+... ..++|
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~-----~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVD-----PAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECC-----TTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCc-----ccccHHHHHHHHhccccCCCCC
Confidence 45799999999999999999999999977775433322222222 45544321 00233566666554 35799
Q ss_pred EEEeCCCc
Q 009316 146 MLHPGYGF 153 (537)
Q Consensus 146 ~V~pg~g~ 153 (537)
.|+-..|.
T Consensus 243 ~vid~~g~ 250 (352)
T 1e3j_A 243 VTIDCSGN 250 (352)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99976553
No 216
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=78.59 E-value=4 Score=40.50 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=33.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD 107 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~ 107 (537)
|+||++.|..+.|+..++++.+.|+++++|.+.+|..
T Consensus 4 mmrIvf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~ 40 (317)
T 3rfo_A 4 MIKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRP 40 (317)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEECCCCCE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHCCCcEEEEEeCCCcc
Confidence 5799999999999999999999999999999887753
No 217
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=78.48 E-value=2.2 Score=39.05 Aligned_cols=31 Identities=10% Similarity=0.063 Sum_probs=28.4
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
..|+|+|.|..++..+..|.+.|++|+++..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 4599999999999999999999999999953
No 218
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=78.45 E-value=4 Score=41.26 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=37.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC-CchhhccCEEEE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALHVKLADESVC 119 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~-~~~~~~ad~~~~ 119 (537)
-.+++|.|.|..+..+++-++.+|++|+++++.++.. ...+.-+++.+.
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~~~~fp~a~~v~~ 248 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHFFPDADEIIV 248 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGCGGGCTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccccccCCCceEEec
Confidence 4689999999999999999999999999997655422 222334555553
No 219
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=78.37 E-value=3.3 Score=38.77 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=28.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
+|++||.| .+.|+..+++.+.+.|+++++++.+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57899999 4789999999999999999988654
No 220
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=78.36 E-value=6.3 Score=42.07 Aligned_cols=32 Identities=6% Similarity=0.047 Sum_probs=28.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
.||+.|.+.+..+..+++.++++|++++.+.+
T Consensus 335 GKrv~i~~~~~~~~~l~~~l~ElGm~vv~~~t 366 (533)
T 1mio_A 335 GKTACLYVGGSRSHTYMNMLKSFGVDSLVAGF 366 (533)
T ss_dssp TCEEEEEESSSHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHCCCEEEEEEe
Confidence 48999999888999999999999999998764
No 221
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=78.26 E-value=4.8 Score=37.71 Aligned_cols=77 Identities=9% Similarity=0.055 Sum_probs=47.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC-CCCCCchh-hc---cCEEEEcCCCCCCCCCCCHHHHHHHHHHc--
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST-IDKDALHV-KL---ADESVCIGEAPSSQSYLLIPNVLSAAISR-- 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~-~d~~~~~~-~~---ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-- 142 (537)
.|++||.| .|.++..+++.+.+.|++++++..+ .+...... .+ ......+. -+..+.+.+.++.++.
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA-----ADLATSEACQQLVDEFVA 81 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEE-----CCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEE-----CCCCCHHHHHHHHHHHHH
Confidence 47899999 4889999999999999999988654 22211000 00 11222221 1345566665555432
Q ss_pred ---CCCEEEeCCC
Q 009316 143 ---GCTMLHPGYG 152 (537)
Q Consensus 143 ---~~d~V~pg~g 152 (537)
++|.|+-.-|
T Consensus 82 ~~g~id~vi~~Ag 94 (258)
T 3afn_B 82 KFGGIDVLINNAG 94 (258)
T ss_dssp HHSSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 7998886544
No 222
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=78.16 E-value=12 Score=38.06 Aligned_cols=124 Identities=12% Similarity=0.191 Sum_probs=76.8
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeC----------CC--c------------------cccc--HHHHHHHHHCCCceeCC
Q 009316 127 QSYLLIPNVLSAAISRGCTMLHPG----------YG--F------------------LAEN--AVFVEMCREHGINFIGP 174 (537)
Q Consensus 127 ~sy~~~~~i~~~a~~~~~d~V~pg----------~g--~------------------lsE~--~~~a~~~e~~Gl~~iGp 174 (537)
.|..-..++++.+++.|+|+|=-+ +. | +++. ..+.+.|++.|+.|+-.
T Consensus 41 Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~st 120 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLST 120 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECB
T ss_pred ccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEc
Confidence 444556677888889999988522 11 1 1221 46778888999988743
Q ss_pred CHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHH
Q 009316 175 NPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAK 254 (537)
Q Consensus 175 ~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~ 254 (537)
.. |.. .-+++.+.|++...=-....++..-+.+. .+.|-|+++| +||. +.+|+..+++.+.
T Consensus 121 pf-------D~~-svd~l~~~~vd~~KIgS~~~~N~pLL~~v-a~~gKPViLS-------tGma---Tl~Ei~~Ave~i~ 181 (385)
T 1vli_A 121 VC-------DEG-SADLLQSTSPSAFKIASYEINHLPLLKYV-ARLNRPMIFS-------TAGA---EISDVHEAWRTIR 181 (385)
T ss_dssp CC-------SHH-HHHHHHTTCCSCEEECGGGTTCHHHHHHH-HTTCSCEEEE-------CTTC---CHHHHHHHHHHHH
T ss_pred cC-------CHH-HHHHHHhcCCCEEEECcccccCHHHHHHH-HhcCCeEEEE-------CCCC---CHHHHHHHHHHHH
Confidence 22 222 23467777777633211445666655544 4679999999 6773 8999999988775
Q ss_pred HHHHHhcCCCcEEEEecccC
Q 009316 255 SEAAAAFGNDGVYLEKYVQN 274 (537)
Q Consensus 255 ~~~~~~~g~~~vlvEe~I~g 274 (537)
.. |+.++++-+-+..
T Consensus 182 ~~-----Gn~~iiLlhc~s~ 196 (385)
T 1vli_A 182 AE-----GNNQIAIMHCVAK 196 (385)
T ss_dssp TT-----TCCCEEEEEECSS
T ss_pred HC-----CCCcEEEEeccCC
Confidence 43 3445555444433
No 223
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=78.11 E-value=3.6 Score=39.41 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=29.4
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
+.|++||.|. +.|+..+++.+.+.|+++++++.+
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3578999994 789999999999999999998654
No 224
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=78.09 E-value=4.8 Score=38.54 Aligned_cols=75 Identities=13% Similarity=0.069 Sum_probs=47.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-ccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~---- 142 (537)
.|++||.|. |.++..+++.+.+.|++++++..+.+....... ..+ ..+.+ +..+.+.+.++.++.
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL-------DVTDGERIDVVAADVLARY 77 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEe-------eCCCHHHHHHHHHHHHHhC
Confidence 578999994 889999999999999999988654432111111 111 22222 345566665555443
Q ss_pred -CCCEEEeCCC
Q 009316 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~pg~g 152 (537)
++|.++-.-|
T Consensus 78 g~id~lv~~Ag 88 (281)
T 3m1a_A 78 GRVDVLVNNAG 88 (281)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898875544
No 225
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=77.81 E-value=11 Score=35.85 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=47.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-----~~ 144 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.+..... .-..+.. +..+.+.+.+++++. ++
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DIHTVAG-------DISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TEEEEES-------CTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ceEEEEc-------cCCCHHHHHHHHHHHHHHCCCC
Confidence 478999994 7899999999999999999987654432211 1122222 345555555554432 79
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|.++-.-|
T Consensus 98 D~lv~nAg 105 (260)
T 3un1_A 98 DSLVNNAG 105 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886544
No 226
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=77.69 E-value=2.6 Score=42.24 Aligned_cols=139 Identities=17% Similarity=0.197 Sum_probs=78.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
..||.|+|.|.++...+++++++ |++++++++ .+.. ....++++. + ...|.+.+++++ ...+|+|+-
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d-~~~~-~~~~~~~~~---g----~~~~~~~~~~l~---~~~~D~V~i 72 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYS-RTED-KREKFGKRY---N----CAGDATMEALLA---REDVEMVII 72 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEC-SSHH-HHHHHHHHH---T----CCCCSSHHHHHH---CSSCCEEEE
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEEC-CCHH-HHHHHHHHc---C----CCCcCCHHHHhc---CCCCCEEEE
Confidence 45899999999999999999998 888887763 2211 111222211 1 112667666653 457999886
Q ss_pred CCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC-CCCHHHHHHHHH--hcC
Q 009316 150 GYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL-LQSTEEAVKLAD--ELG 221 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~-v~~~~~~~~~~~--~ig 221 (537)
.... ..+.+.+..+.+.|.+++- .+.+..+ .+.+.+++.|+..-.++... ......+.+..+ .+|
T Consensus 73 ~tp~-~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~------~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG 145 (354)
T 3db2_A 73 TVPN-DKHAEVIEQCARSGKHIYVEKPISVSLDHAQ------RIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIG 145 (354)
T ss_dssp CSCT-TSHHHHHHHHHHTTCEEEEESSSCSSHHHHH------HHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTTC
T ss_pred eCCh-HHHHHHHHHHHHcCCEEEEccCCCCCHHHHH------HHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCCC
Confidence 5321 2345667777778876542 2333222 23445666777654332111 112334444444 466
Q ss_pred CcEEEee
Q 009316 222 FPVMIKA 228 (537)
Q Consensus 222 ~PvvvKp 228 (537)
-+..+..
T Consensus 146 ~i~~v~~ 152 (354)
T 3db2_A 146 EVSSIEA 152 (354)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 6655543
No 227
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=77.53 E-value=4.2 Score=37.97 Aligned_cols=33 Identities=9% Similarity=0.027 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 4889999999999999999888643
No 228
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=77.42 E-value=3.9 Score=38.89 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=30.9
Q ss_pred CCCCCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
|.....|++||.| .+.++..+++.+.+.|++++++..+
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 4444568999999 4889999999999999999888643
No 229
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=77.37 E-value=1 Score=45.44 Aligned_cols=78 Identities=13% Similarity=0.067 Sum_probs=49.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCc-EEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHH----HcCC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIP-CVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAI----SRGC 144 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~-~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~----~~~~ 144 (537)
..++|||.|.|.++.-+++.||.+|.+ ++++...++......+++|..+...- +..+.+.+.+..+ ..++
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~-----~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKV-----ERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEEC-----CSCCHHHHHHHHHHHTSSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccc-----cccchHHHHHHHHHHhCCCCC
Confidence 457899999999999999999999998 77776555444444445655442210 0112333333332 3479
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|.|+-..|
T Consensus 254 Dvvid~~g 261 (363)
T 3m6i_A 254 AVALECTG 261 (363)
T ss_dssp SEEEECSC
T ss_pred CEEEECCC
Confidence 99997655
No 230
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=77.18 E-value=4.2 Score=37.68 Aligned_cols=76 Identities=12% Similarity=-0.002 Sum_probs=46.2
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-c-cCEEEEcCCCCCCCCCCCHHHHHHHHHH-----
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L-ADESVCIGEAPSSQSYLLIPNVLSAAIS----- 141 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~----- 141 (537)
|.|++||.| .|.++..+++.+.+.|++++++..+.+....... + .-..+.. +..+.+.+.++.+.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~ 76 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPG-------DVREEGDWARAVAAMEEAF 76 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 347899999 5889999999999999999988643321110000 1 1122322 24455555544433
Q ss_pred cCCCEEEeCCC
Q 009316 142 RGCTMLHPGYG 152 (537)
Q Consensus 142 ~~~d~V~pg~g 152 (537)
.++|.++-.-|
T Consensus 77 ~~id~li~~Ag 87 (234)
T 2ehd_A 77 GELSALVNNAG 87 (234)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 27898886544
No 231
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.18 E-value=4.9 Score=40.27 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=27.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
-+||||+|.|..+..+++.+-..|+..+.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~Itlv 64 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFV 64 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEe
Confidence 4789999999999999999999999877654
No 232
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=77.07 E-value=5.7 Score=42.33 Aligned_cols=86 Identities=14% Similarity=0.124 Sum_probs=54.5
Q ss_pred CCEEEEEcCcHHHHHHHHHH-HHcCCcEEEEecCCCCCCch-----hhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 71 QEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALH-----VKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa-~~~Gi~~v~v~~~~d~~~~~-----~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
.||++|.+.+..+..+++.+ +++|++++.+.+........ ..+.++.+ + ..|...+.+.+++.++
T Consensus 280 GKrv~i~gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~~~~v~-i--------~~D~~el~~~i~~~~p 350 (525)
T 3aek_B 280 GKRVFIFGDGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEYGLEAL-I--------TDDYLEVEKAIEAAAP 350 (525)
T ss_dssp TCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHTTCCCE-E--------CSCHHHHHHHHHHHCC
T ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHHHhcCCcEE-E--------eCCHHHHHHHHhhcCC
Confidence 48999999888999999999 89999998775432111111 11122222 2 2356778888888888
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 145 TMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 145 d~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
|.++.+ ..-...+++.|++++
T Consensus 351 DL~ig~-------~~~~~~a~~~giP~~ 371 (525)
T 3aek_B 351 ELILGT-------QMERNIAKKLGLPCA 371 (525)
T ss_dssp SEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CEEEec-------chhHHHHHHcCCCEE
Confidence 888842 122234456677653
No 233
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=77.06 E-value=10 Score=37.43 Aligned_cols=73 Identities=11% Similarity=-0.026 Sum_probs=48.0
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCcEEEEecCCCCCC-chh-hcc---C-EEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 73 KILVANR-GEIAVRVIRTAHEM-GIPCVAVYSTIDKDA-LHV-KLA---D-ESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 73 ~iLI~~~-g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~-~~~-~~a---d-~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
||||.|. |.++..+++.+.+. |++|+++........ ... .+. . +.+.. +..|.+.+.++.++.++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 74 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHA-------DICDSAEITRIFEQYQP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHHHHHCC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEEC-------CCCCHHHHHHHHhhcCC
Confidence 6999994 99999999999988 799998864331111 111 110 1 12222 45677888888876789
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|+|+-.-+
T Consensus 75 d~vih~A~ 82 (361)
T 1kew_A 75 DAVMHLAA 82 (361)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 98875544
No 234
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=76.97 E-value=6.9 Score=40.72 Aligned_cols=112 Identities=13% Similarity=0.026 Sum_probs=69.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHH----------cCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009316 72 EKILVANRGEIAVRVIRTAHE----------MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~----------~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~ 141 (537)
-||.|+|-|.++..+++.+++ .+++++.|.. .+.. ....+++. ..-|.|.+++++ .
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d-~~~~-~~~~~~~~---------~~~~~d~~ell~---d 76 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAV-RNLD-KAEALAGG---------LPLTTNPFDVVD---D 76 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEEC-SCHH-HHHHHHTT---------CCEESCTHHHHT---C
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEE-CCHH-Hhhhhccc---------CcccCCHHHHhc---C
Confidence 389999999999888877653 4667777753 2211 11111111 112456555543 4
Q ss_pred cCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCC
Q 009316 142 RGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 142 ~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
..+|+|+-..+-.....++...+-+.|..++..++.. ...+=..+.+++++.|+..
T Consensus 77 ~diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal--~a~~~~eL~~~A~~~gv~l 132 (444)
T 3mtj_A 77 PEIDIVVELIGGLEPARELVMQAIANGKHVVTANKHL--VAKYGNEIFAAAQAKGVMV 132 (444)
T ss_dssp TTCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHH--HHHHHHHHHHHHHHHTCCE
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCccc--CHHHHHHHHHHHHHhCCeE
Confidence 5789988554322234567777888999988777743 2333456677888888876
No 235
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=76.96 E-value=5.3 Score=37.78 Aligned_cols=89 Identities=7% Similarity=-0.008 Sum_probs=55.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-cCCCEE-
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-RGCTML- 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~-~~~d~V- 147 (537)
+.+||.|+|.|.++..+++.+++.|++++.++... ...-+| .++++ ...+..+++.... .+.+.+
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~-----~~~~aD-ilavP-------~~ai~~vl~~l~~~l~~g~iv 71 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE-----DIRDFE-LVVID-------AHGVEGYVEKLSAFARRGQMF 71 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG-----GGGGCS-EEEEC-------SSCHHHHHHHHHTTCCTTCEE
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH-----HhccCC-EEEEc-------HHHHHHHHHHHHHhcCCCCEE
Confidence 34689999999999999999999999888775421 245688 77774 2245555554432 233333
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeC
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
+-..|.... ...+.+...|..|+|
T Consensus 72 vd~sgs~~~--~vl~~~~~~g~~fvg 95 (232)
T 3dfu_A 72 LHTSLTHGI--TVMDPLETSGGIVMS 95 (232)
T ss_dssp EECCSSCCG--GGGHHHHHTTCEEEE
T ss_pred EEECCcCHH--HHHHHHHhCCCcEEE
Confidence 222333322 233344567877764
No 236
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=76.90 E-value=2.4 Score=42.28 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=49.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCC-HHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLL-IPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~-~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|. +++++...++......+++|..+.. . + .+ .+.+.++. ..++|.|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~----~--~-~~~~~~~~~~~-~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNP----L--E-EDLLEVVRRVT-GSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECT----T--T-SCHHHHHHHHH-SSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCc----C--c-cCHHHHHHHhc-CCCCCEE
Confidence 45789999999999999999999999 8888864433222222235554421 1 1 12 33444444 4579999
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-..|
T Consensus 236 id~~g 240 (343)
T 2dq4_A 236 LEFSG 240 (343)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 96655
No 237
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=76.82 E-value=13 Score=36.42 Aligned_cols=73 Identities=11% Similarity=-0.011 Sum_probs=47.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHc--CCcEEEEecCCCCCC-chh-hcc--C-EEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEM--GIPCVAVYSTIDKDA-LHV-KLA--D-ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~-~~~-~~a--d-~~~~i~~~~~~~sy~~~~~i~~~a~~~ 142 (537)
||+|||.| .|.++..+++.+.+. |++|+++........ ... .+. . +.+.. +..|.+.+.++.+
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~-- 74 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVG-------DIADAELVDKLAA-- 74 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEEC-------CTTCHHHHHHHHT--
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEEC-------CCCCHHHHHHHhh--
Confidence 57999999 599999999999998 899998865432111 111 111 1 12221 3567777777764
Q ss_pred CCCEEEeCCC
Q 009316 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~pg~g 152 (537)
++|+|+-.-+
T Consensus 75 ~~d~vih~A~ 84 (348)
T 1oc2_A 75 KADAIVHYAA 84 (348)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEECCc
Confidence 4798875544
No 238
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=76.81 E-value=4.7 Score=38.38 Aligned_cols=69 Identities=17% Similarity=0.053 Sum_probs=46.0
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 73 KILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 73 ~iLI~~~-g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+|||.|. |.++..+++.+.+. |++++++..+.+.........-+.+.. +..|.+.+.++.+ ++|+|+-
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQA-------DYGDEAALTSALQ--GVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEEC-------CTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEc-------CCCCHHHHHHHHh--CCCEEEE
Confidence 4899995 99999999999998 999999875543221111111123322 4667777777764 6898874
Q ss_pred C
Q 009316 150 G 150 (537)
Q Consensus 150 g 150 (537)
.
T Consensus 72 ~ 72 (286)
T 2zcu_A 72 I 72 (286)
T ss_dssp C
T ss_pred e
Confidence 3
No 239
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=76.81 E-value=2.7 Score=40.75 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=30.3
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|+++|||.|. |.++..+++.+.+.|++|+++....
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 34689999996 9999999999999999999986543
No 240
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=76.79 E-value=5.8 Score=39.44 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=57.6
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~-ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
|-||.|+|.|.++.. .+.++++. +.++++|.+ .+.. ....+++++ -+ ...|.|.+++++ ...+|+|+
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d-~~~~-~a~~~a~~~-g~-----~~~y~d~~ell~---~~~iDaV~ 91 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIAS-RDLT-RAREMADRF-SV-----PHAFGSYEEMLA---SDVIDAVY 91 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEEC-SSHH-HHHHHHHHH-TC-----SEEESSHHHHHH---CSSCSEEE
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEEC-CCHH-HHHHHHHHc-CC-----CeeeCCHHHHhc---CCCCCEEE
Confidence 568999999999965 67888887 788888863 2211 112233221 01 123677777654 45799988
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
-..- ...+.+.+..+.+.|.+++.
T Consensus 92 I~tP-~~~H~~~~~~al~aGkhVl~ 115 (350)
T 4had_A 92 IPLP-TSQHIEWSIKAADAGKHVVC 115 (350)
T ss_dssp ECSC-GGGHHHHHHHHHHTTCEEEE
T ss_pred EeCC-CchhHHHHHHHHhcCCEEEE
Confidence 6532 22346777788888987663
No 241
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=76.79 E-value=1.8 Score=40.51 Aligned_cols=78 Identities=12% Similarity=0.110 Sum_probs=49.3
Q ss_pred CCCCEEEEE--cCcHHHHHHHHHHHH-cCCcEEEEecCCCCCCchhhccC----EEEEcCCCCCCCCCCC----HHHHHH
Q 009316 69 CRQEKILVA--NRGEIAVRVIRTAHE-MGIPCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLL----IPNVLS 137 (537)
Q Consensus 69 ~~~~~iLI~--~~g~ia~~ii~aa~~-~Gi~~v~v~~~~d~~~~~~~~ad----~~~~i~~~~~~~sy~~----~~~i~~ 137 (537)
.+++||.|+ |+|.....+++++++ +++++++|.++.+ .+....|. ..+.+ +..+|.+ -+++++
T Consensus 10 ~~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~--a~~~~~A~~~gIp~~~~----~~~~~~~r~~~d~~~~~ 83 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRE--CRAAEIAAEASVPVFTV----RLADHPSRDAWDVAITA 83 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSC--CHHHHHHHHTTCCEEEC----CGGGSSSHHHHHHHHHH
T ss_pred CCCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCc--hHHHHHHHHcCCCEEEe----CcccccchhhhhHHHHH
Confidence 345788888 889999999988865 4568898888776 33333332 12222 1122332 346778
Q ss_pred HHHHcCCCEEEe-CCC
Q 009316 138 AAISRGCTMLHP-GYG 152 (537)
Q Consensus 138 ~a~~~~~d~V~p-g~g 152 (537)
..++.++|.|+. +|+
T Consensus 84 ~l~~~~~Dlivlagy~ 99 (215)
T 3da8_A 84 ATAAHEPDLVVSAGFM 99 (215)
T ss_dssp HHHTTCCSEEEEEECC
T ss_pred HHHhhCCCEEEEcCch
Confidence 888888997664 354
No 242
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=76.78 E-value=2.1 Score=41.63 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=24.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
||+|||.|. |.++..+++.+.+.| .++++.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~ 31 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVID 31 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEE
Confidence 468999995 999999999999999 666664
No 243
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=76.78 E-value=8.9 Score=38.40 Aligned_cols=89 Identities=12% Similarity=0.051 Sum_probs=55.7
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 72 EKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~~iLI~~~g~ia~~-ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
.||.|+|.|.++.. .++++++. ++++++|++ .+.. ....++++. .....|.+.+++++ ...+|+|+-
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~a~~~------~~~~~~~~~~~ll~---~~~vD~V~i 74 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACD-SDLE-RARRVHRFI------SDIPVLDNVPAMLN---QVPLDAVVM 74 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEEC-SSHH-HHGGGGGTS------CSCCEESSHHHHHH---HSCCSEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEc-CCHH-HHHHHHHhc------CCCcccCCHHHHhc---CCCCCEEEE
Confidence 58999999999985 88999887 788887763 2211 112233221 11123667666654 457899986
Q ss_pred CCCcccccHHHHHHHHHCCCcee
Q 009316 150 GYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
... ...+.+.+..+.+.|..++
T Consensus 75 ~tp-~~~H~~~~~~al~aGkhVl 96 (359)
T 3m2t_A 75 AGP-PQLHFEMGLLAMSKGVNVF 96 (359)
T ss_dssp CSC-HHHHHHHHHHHHHTTCEEE
T ss_pred cCC-cHHHHHHHHHHHHCCCeEE
Confidence 532 1233566677777888765
No 244
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=76.77 E-value=4.1 Score=40.33 Aligned_cols=72 Identities=8% Similarity=-0.149 Sum_probs=48.8
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHcC-----CcEEEEecCCCCCCchhhccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcC-
Q 009316 72 EKILVAN-RGEIAVRVIRTAHEMG-----IPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRG- 143 (537)
Q Consensus 72 ~~iLI~~-~g~ia~~ii~aa~~~G-----i~~v~v~~~~d~~~~~~~~ad-~~~~i~~~~~~~sy~~~~~i~~~a~~~~- 143 (537)
|+|||.| .|.++..+++.+.+.| ++|+++....+... ..... +.+.. +..|.+.+.++.+..+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQC-------DISDPDDSQAKLSPLTD 72 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEEC-------CTTSHHHHHHHHTTCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEe-------ecCCHHHHHHHHhcCCC
Confidence 5899999 5999999999999999 99998875544322 00011 22222 4567777877776544
Q ss_pred CCEEEeCCC
Q 009316 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~pg~g 152 (537)
+|.|+-.-+
T Consensus 73 ~d~vih~a~ 81 (364)
T 2v6g_A 73 VTHVFYVTW 81 (364)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898875443
No 245
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=76.75 E-value=4 Score=40.51 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=32.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD 107 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~ 107 (537)
.+||+++|..+.++..++++.+.|+++++|.+.+|..
T Consensus 7 ~mrivf~Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p 43 (318)
T 3q0i_A 7 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERP 43 (318)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTSSSEEEEEECCCC--
T ss_pred CCEEEEEecCHHHHHHHHHHHHCCCcEEEEEcCCCCc
Confidence 3689999999999999999999999999999887754
No 246
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=76.70 E-value=8.5 Score=36.81 Aligned_cols=29 Identities=14% Similarity=0.358 Sum_probs=25.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
-+||.+.|-|.++..+++. . +++.+.++.
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~ 40 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD 40 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe
Confidence 4789999999999999998 4 999999885
No 247
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=76.65 E-value=6.7 Score=37.59 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=30.6
Q ss_pred CCCCCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
|.....|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3333457899999 5789999999999999999988643
No 248
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=76.64 E-value=15 Score=36.04 Aligned_cols=99 Identities=11% Similarity=-0.025 Sum_probs=53.1
Q ss_pred CEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCC------------CCCHH
Q 009316 72 EKILVANRGEI-----AVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQS------------YLLIP 133 (537)
Q Consensus 72 ~~iLI~~~g~i-----a~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~s------------y~~~~ 133 (537)
+|||++..+.. +..+++++++.|+++.++............. .-..+.+........ .....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWR 86 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHHHH
Confidence 68888864421 3478899999999999886543211111111 112333321110000 01234
Q ss_pred HHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 134 NVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 134 ~i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
.+.+++++.++|.||....+. ......++...|++++
T Consensus 87 ~l~~~l~~~~pDvv~~~~~~~--~~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 87 QARAIMKAYKPDVVLGMGGYV--SGPGGLAAWSLGIPVV 123 (364)
T ss_dssp HHHHHHHHHCCSEEEECSSTT--HHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhcCCCEEEEeCCcC--chHHHHHHHHcCCCEE
Confidence 566777888999999754321 1222334456677765
No 249
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.58 E-value=5.2 Score=38.12 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=29.2
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..|++||.| .+.++..+++.+.+.|++++++..+
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 4789999999999999999988644
No 250
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=76.46 E-value=8.2 Score=38.51 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=46.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhcc---CEEEEcCCCCCCCC-CCCHHHHHHHHHHcCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA---DESVCIGEAPSSQS-YLLIPNVLSAAISRGCT 145 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~a---d~~~~i~~~~~~~s-y~~~~~i~~~a~~~~~d 145 (537)
.++|||.| .|.++..+++.+.+.|++|+++..+.+... ...+. .-.+.. .+ ..|.+.+.++.+ ++|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~l~~~~~v~~v~------~D~l~d~~~l~~~~~--~~d 75 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-AEELQAIPNVTLFQ------GPLLNNVPLMDTLFE--GAH 75 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-HHHHHTSTTEEEEE------SCCTTCHHHHHHHHT--TCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-HHHHhhcCCcEEEE------CCccCCHHHHHHHHh--cCC
Confidence 46899999 599999999999999999999865443210 01111 111212 14 567777777663 689
Q ss_pred EEEeC
Q 009316 146 MLHPG 150 (537)
Q Consensus 146 ~V~pg 150 (537)
.|+-.
T Consensus 76 ~Vi~~ 80 (352)
T 1xgk_A 76 LAFIN 80 (352)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88743
No 251
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=76.36 E-value=16 Score=34.67 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=49.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEEE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-~~d~V~ 148 (537)
-|++||.|. +-|+..+++.+.+.|.+|++++.+.+.........-..+.+ +-.|.+.+.++.++. ++|.++
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREEL-------DITDSQRLQRLFEALPRLDVLV 83 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEEC-------CTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEe-------cCCCHHHHHHHHHhcCCCCEEE
Confidence 488999994 67999999999999999999976655432111111112222 345566676666665 478888
Q ss_pred eCCC
Q 009316 149 PGYG 152 (537)
Q Consensus 149 pg~g 152 (537)
-.-|
T Consensus 84 NNAG 87 (242)
T 4b79_A 84 NNAG 87 (242)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6544
No 252
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=76.22 E-value=3 Score=39.71 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=29.0
Q ss_pred CCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~---g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||.|. +.++..+++.+.+.|+++++++.+.
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 378999996 5899999999999999999886543
No 253
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=76.17 E-value=4.5 Score=40.45 Aligned_cols=90 Identities=13% Similarity=0.178 Sum_probs=55.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+|.|.++...++++++. +++++++++ .+... ...++++. + ...|.+.+++++ ...+|+|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d-~~~~~-~~~~~~~~---~----~~~~~~~~~ll~---~~~~D~V~ 80 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCD-IDPAA-LKAAVERT---G----ARGHASLTDMLA---QTDADIVI 80 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEEC-SSHHH-HHHHHHHH---C----CEEESCHHHHHH---HCCCSEEE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEc-CCHHH-HHHHHHHc---C----CceeCCHHHHhc---CCCCCEEE
Confidence 46899999999999999999998 788887763 22111 11122110 0 013566666653 46799988
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
-..- ...+.+.+..+.+.|..++.
T Consensus 81 i~tp-~~~h~~~~~~al~~gk~v~~ 104 (354)
T 3q2i_A 81 LTTP-SGLHPTQSIECSEAGFHVMT 104 (354)
T ss_dssp ECSC-GGGHHHHHHHHHHTTCEEEE
T ss_pred ECCC-cHHHHHHHHHHHHCCCCEEE
Confidence 6532 12345666666777876653
No 254
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=76.16 E-value=14 Score=36.21 Aligned_cols=39 Identities=8% Similarity=-0.074 Sum_probs=31.1
Q ss_pred CCCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 65 LKVTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 65 ~~~~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|.....|++||.|. +.|+..+++.+.+.|.++++++..
T Consensus 40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 455555688999994 789999999999999999998643
No 255
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=76.16 E-value=6.5 Score=38.46 Aligned_cols=33 Identities=9% Similarity=0.018 Sum_probs=28.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHc-CCcEEEEecCC
Q 009316 72 EKILVANR-GEIAVRVIRTAHEM-GIPCVAVYSTI 104 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~-Gi~~v~v~~~~ 104 (537)
|+|||.|. |.++..+++.+.+. |++|+++....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 35 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS 35 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 47999996 99999999999998 89999886543
No 256
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=75.93 E-value=2.8 Score=41.37 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=53.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
.||.|+|.|.++...++.+++. +++++++++ .+.. ....++++. + ....|.+.++++ ...+|+|+-.
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d-~~~~-~~~~~~~~~---~---~~~~~~~~~~~l----~~~~D~V~i~ 69 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYS-RKLE-TAATFASRY---Q---NIQLFDQLEVFF----KSSFDLVYIA 69 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEEC-SSHH-HHHHHGGGS---S---SCEEESCHHHHH----TSSCSEEEEC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEe-CCHH-HHHHHHHHc---C---CCeEeCCHHHHh----CCCCCEEEEe
Confidence 4899999999999999999887 677777753 2211 111223221 0 011256666654 4579998865
Q ss_pred CCcccccHHHHHHHHHCCCcee
Q 009316 151 YGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
.. ...+...+..+.+.|.+++
T Consensus 70 tp-~~~h~~~~~~al~~gk~V~ 90 (325)
T 2ho3_A 70 SP-NSLHFAQAKAALSAGKHVI 90 (325)
T ss_dssp SC-GGGHHHHHHHHHHTTCEEE
T ss_pred CC-hHHHHHHHHHHHHcCCcEE
Confidence 42 1234566666677777654
No 257
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=75.89 E-value=8.4 Score=42.30 Aligned_cols=75 Identities=15% Similarity=0.064 Sum_probs=50.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hc----cC--EEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL----AD--ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~----ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~ 142 (537)
.|+|||.| .|.++..+++.+.+.|++|+++........... .+ .. +.+.. +..+.+.+.++++..
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~-------Dl~d~~~l~~~~~~~ 83 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEV-------DLCDRKGLEKVFKEY 83 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEEC-------CTTCHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEc-------CCCCHHHHHHHHHhC
Confidence 57899999 599999999999999999998864433221110 00 01 12222 456778888887766
Q ss_pred CCCEEEeCCC
Q 009316 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~pg~g 152 (537)
++|+|+-.-+
T Consensus 84 ~~D~Vih~A~ 93 (699)
T 1z45_A 84 KIDSVIHFAG 93 (699)
T ss_dssp CCCEEEECCS
T ss_pred CCCEEEECCc
Confidence 8998875543
No 258
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=75.88 E-value=4.8 Score=38.15 Aligned_cols=75 Identities=11% Similarity=0.081 Sum_probs=46.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~---- 142 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.+.+...... .+.. ..+.. +..+.+.+.++.++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQM-------DVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-------CTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEe-------eCCCHHHHHHHHHHHHHHc
Confidence 47899999 478999999999999999988864332111100 1111 22222 345555555544432
Q ss_pred -CCCEEEeCCC
Q 009316 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~pg~g 152 (537)
++|.++-.-|
T Consensus 81 g~id~lv~~Ag 91 (259)
T 4e6p_A 81 GGLDILVNNAA 91 (259)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898876544
No 259
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=75.76 E-value=5.4 Score=38.15 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=29.9
Q ss_pred CCCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 70 RQEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~~iLI~~~---g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
..|++||.|. +.|+..+++.+.+.|+++++++.+.
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3578999996 5899999999999999999886544
No 260
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=75.66 E-value=12 Score=35.11 Aligned_cols=75 Identities=9% Similarity=-0.013 Sum_probs=47.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~---- 142 (537)
.|++||.| .|.++..+++.+.+.|++++++..+.+...... .+.. ..+.+ +..+.+.+.+++++.
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA-------DVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEc-------CCCCHHHHHHHHHHHHHHC
Confidence 47899999 588999999999999999999865443211111 1111 22222 344555555554432
Q ss_pred -CCCEEEeCCC
Q 009316 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~pg~g 152 (537)
++|.|+-.-|
T Consensus 85 g~id~li~~Ag 95 (265)
T 2o23_A 85 GRVDVAVNCAG 95 (265)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 7998886544
No 261
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=75.64 E-value=1.8 Score=43.25 Aligned_cols=35 Identities=26% Similarity=0.272 Sum_probs=31.2
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~ 106 (537)
+||+++|..+.+..+++++.+.|+++++|.+.+|.
T Consensus 23 mrIvf~G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 57 (329)
T 2bw0_A 23 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDK 57 (329)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEEeCCCc
Confidence 68999999889999999999999999999886664
No 262
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=75.50 E-value=4 Score=40.54 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCc-HHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANRG-EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~g-~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.| .++..+++.|+.+|.+++++..+.+......++ +|..+... +....+.+.++....++|.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~------~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTS------TAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCC------cccHHHHHHHHhCCCCCcE
Confidence 345799999976 899999999999999998887655543333333 44444321 1122445555554457999
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-..|
T Consensus 217 vid~~g 222 (340)
T 3gms_A 217 AIDSIG 222 (340)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 996555
No 263
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=75.47 E-value=5 Score=37.90 Aligned_cols=35 Identities=6% Similarity=0.175 Sum_probs=30.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcC---CcEEEEecCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMG---IPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~G---i~~v~v~~~~d 105 (537)
+|++||.| .|.++..+++.+.+.| ++++++..+.+
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~ 59 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE 59 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChh
Confidence 57899999 5889999999999999 99998876544
No 264
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=75.39 E-value=6.2 Score=39.07 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=32.4
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD 107 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~ 107 (537)
+||+++|.++.+...++++.+.|+++++|.+.+|..
T Consensus 4 mrIvf~Gt~~fa~~~L~~L~~~~~~i~~Vvt~pd~p 39 (314)
T 1fmt_A 4 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRP 39 (314)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCCCBC
T ss_pred CEEEEEecCHHHHHHHHHHHHCCCcEEEEEeCCCCc
Confidence 689999999999999999999999999998887643
No 265
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=75.39 E-value=3.3 Score=39.47 Aligned_cols=33 Identities=3% Similarity=-0.054 Sum_probs=29.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
|+.+|+|+|.|..++..+..+++.|++++++..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 457899999999999999999999999999953
No 266
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=75.31 E-value=9.8 Score=37.14 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=29.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.++|.|+|-|.++..+++.++.+|+++++++..
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~ 154 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAFGMRVIAYTRS 154 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred cchheeeccCchhHHHHHHHHhhCcEEEEEecc
Confidence 579999999999999999999999998887543
No 267
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=75.24 E-value=3.8 Score=38.53 Aligned_cols=69 Identities=13% Similarity=0.045 Sum_probs=46.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc--CCCEE
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR--GCTML 147 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~--~~d~V 147 (537)
||++||.| .|.++..+++.+.+.|++|+++..+.+.... + + .-+..+.+.+.+++++. ++|.+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----~----~-----~~Dl~~~~~v~~~~~~~~~~id~l 66 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----D----L-----STAEGRKQAIADVLAKCSKGMDGL 66 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----C----T-----TSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----c----c-----ccCCCCHHHHHHHHHHhCCCCCEE
Confidence 47899999 4789999999999999999988654332110 0 1 11234455666666554 67988
Q ss_pred EeCCCc
Q 009316 148 HPGYGF 153 (537)
Q Consensus 148 ~pg~g~ 153 (537)
+-.-|.
T Consensus 67 v~~Ag~ 72 (257)
T 1fjh_A 67 VLCAGL 72 (257)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 866554
No 268
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=75.23 E-value=9.3 Score=37.09 Aligned_cols=40 Identities=10% Similarity=0.065 Sum_probs=31.9
Q ss_pred CCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 66 KVTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 66 ~~~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
|.....|++||.|. +.|+..+++.+.+.|+++++++.+.+
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 76 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR 76 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 33344578999994 78999999999999999999865443
No 269
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=75.09 E-value=16 Score=34.26 Aligned_cols=78 Identities=10% Similarity=-0.010 Sum_probs=45.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-ccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-----C
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LADESVCIGEAPSSQSYLLIPNVLSAAISR-----G 143 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-----~ 143 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.+....... +......+. -+..+.+.+.+++++. +
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRN-----ADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEE-----CCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEE-----ccCCCHHHHHHHHHHHHHHcCC
Confidence 478999994 789999999999999999988765443221111 111111111 1344555555444332 7
Q ss_pred CCEEEeCCCc
Q 009316 144 CTMLHPGYGF 153 (537)
Q Consensus 144 ~d~V~pg~g~ 153 (537)
+|.++-.-|.
T Consensus 82 id~lv~nAg~ 91 (257)
T 3tpc_A 82 VHGLVNCAGT 91 (257)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9998866553
No 270
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=75.07 E-value=2.9 Score=42.83 Aligned_cols=79 Identities=14% Similarity=0.203 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.|.++.-+++.|+.+|. +++++...++......++ +|..+.. . +....+.+.++....++|.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~----~--~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP----T--KENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT----T--TSCHHHHHHHHTTTCCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcC----C--CCCHHHHHHHHhCCCCCCE
Confidence 446799999999999999999999999 677774433332222333 4544421 1 1122455555555568999
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
|+-..|.
T Consensus 286 vid~~g~ 292 (404)
T 3ip1_A 286 FLEATGV 292 (404)
T ss_dssp EEECSSC
T ss_pred EEECCCC
Confidence 9976654
No 271
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=74.99 E-value=14 Score=35.87 Aligned_cols=72 Identities=17% Similarity=-0.016 Sum_probs=45.6
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHcC--CcEEEEecCCCCCC-chh-hcc---C-EEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009316 72 EKILVAN-RGEIAVRVIRTAHEMG--IPCVAVYSTIDKDA-LHV-KLA---D-ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 72 ~~iLI~~-~g~ia~~ii~aa~~~G--i~~v~v~~~~d~~~-~~~-~~a---d-~~~~i~~~~~~~sy~~~~~i~~~a~~~ 142 (537)
++|||.| .|.++..+++.+.+.| ++|+++........ ... .+. . +.+.. +..|.+.+.++. .
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~--~ 74 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKG-------DVADYELVKELV--R 74 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHH--H
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEc-------CCCCHHHHHHHh--h
Confidence 5799999 5999999999999987 88888864321111 111 111 1 12222 356677777766 5
Q ss_pred CCCEEEeCCC
Q 009316 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~pg~g 152 (537)
++|.|+-.-+
T Consensus 75 ~~d~vih~A~ 84 (336)
T 2hun_A 75 KVDGVVHLAA 84 (336)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7998875544
No 272
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=74.91 E-value=2.1 Score=43.27 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=54.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|.+++++...++...... ++ +|..+. |.+.+.+.++. .++|.|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~---------~~~~~~~~~~~--~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLV---------SRDQEQMQAAA--GTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEE---------TTCHHHHHHTT--TCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEe---------ccCHHHHHHhh--CCCCEE
Confidence 457999999999999999999999999888765443322222 22 454442 34445554443 378999
Q ss_pred EeCCCcccccHHHHHHHHHCC
Q 009316 148 HPGYGFLAENAVFVEMCREHG 168 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~G 168 (537)
+-..|.........+.+...|
T Consensus 256 id~~g~~~~~~~~~~~l~~~G 276 (366)
T 1yqd_A 256 IDTVSAVHPLLPLFGLLKSHG 276 (366)
T ss_dssp EECCSSCCCSHHHHHHEEEEE
T ss_pred EECCCcHHHHHHHHHHHhcCC
Confidence 977654222233334444444
No 273
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=74.88 E-value=7.6 Score=40.35 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=59.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCch---hhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcC-CCE
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH---VKLADESVCIGEAPSSQSYLLIPNVLSAAISRG-CTM 146 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~---~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~-~d~ 146 (537)
.|+|+|+|-|..+..+++.++++|++|.+.+.......+. .....-.+.++..+. .++ .+ +|.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~--------~~~-----~~~~d~ 75 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPL--------ELL-----DEDFCY 75 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCG--------GGG-----GSCEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChH--------Hhh-----cCCCCE
Confidence 5899999999999999999999999999886533211111 111222344442111 111 23 788
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSI 179 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i 179 (537)
|+...|.-..++.+ ..+.+.|+++++ ..+..
T Consensus 76 vv~spgi~~~~p~~-~~a~~~gi~v~~-~~e~~ 106 (451)
T 3lk7_A 76 MIKNPGIPYNNPMV-KKALEKQIPVLT-EVELA 106 (451)
T ss_dssp EEECTTSCTTSHHH-HHHHHTTCCEEC-HHHHH
T ss_pred EEECCcCCCCChhH-HHHHHCCCcEEe-HHHHH
Confidence 88777766667665 445678999884 34443
No 274
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=74.85 E-value=20 Score=35.02 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=22.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEE
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCV 98 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v 98 (537)
.+++|.|. |..+..+++.+++.|++.+
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v 41 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVV 41 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEE
Confidence 56888896 7889999999999999844
No 275
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=74.81 E-value=5.1 Score=39.51 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=31.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD 107 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~ 107 (537)
+||+++|.++.|...++++.+.|+++++|.+.+|..
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~~~~i~~Vvt~~d~~ 36 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP 36 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC--
T ss_pred CEEEEEEcCHHHHHHHHHHHHCCCcEEEEEcCCCCC
Confidence 479999999999999999999999999999877653
No 276
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=74.81 E-value=38 Score=32.78 Aligned_cols=165 Identities=21% Similarity=0.341 Sum_probs=96.2
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC-----CCCCch------------hhcc--------CEEEEcCCCCCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI-----DKDALH------------VKLA--------DESVCIGEAPSS 126 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~-----d~~~~~------------~~~a--------d~~~~i~~~~~~ 126 (537)
+.|+-++.|. --.++.+.+-|.+.+++|+.. -..+.. ..++ |-.+..+ -...
T Consensus 28 ~~iig~gaGt--GlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Ag-v~~~ 104 (286)
T 2p10_A 28 EPIIGGGAGT--GLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAG-VNGT 104 (286)
T ss_dssp CCEEEEEESS--HHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEE-ECTT
T ss_pred CceEEEeccc--chhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEE-ECCc
Confidence 3355444432 223678888999999998532 111111 1122 2222222 3455
Q ss_pred CCCCCHHHHHHHHHHcCCCEE--EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCC
Q 009316 127 QSYLLIPNVLSAAISRGCTML--HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD 204 (537)
Q Consensus 127 ~sy~~~~~i~~~a~~~~~d~V--~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~ 204 (537)
+.+.+.+.+++.+++.|+..| ||..|. -+..|.+.+|+.|+.|- +-..+-+.+++.|+-+.++
T Consensus 105 DP~~~~g~~Le~lk~~Gf~Gv~N~ptvgl--idG~fr~~LEE~gm~~~-----------~eve~I~~A~~~gL~Ti~~-- 169 (286)
T 2p10_A 105 DPFMVMSTFLRELKEIGFAGVQNFPTVGL--IDGLFRQNLEETGMSYA-----------QEVEMIAEAHKLDLLTTPY-- 169 (286)
T ss_dssp CTTCCHHHHHHHHHHHTCCEEEECSCGGG--CCHHHHHHHHHTTCCHH-----------HHHHHHHHHHHTTCEECCE--
T ss_pred CCCcCHHHHHHHHHHhCCceEEECCCccc--ccchhhhhHhhcCCCHH-----------HHHHHHHHHHHCCCeEEEe--
Confidence 678899999999999999988 344443 24789999999998642 1233445688999999987
Q ss_pred cCCCCHHHHHHHHHhcCCc-EEEeec-CCCCCcceEEeCCHHHHHHHHHHHHHHH
Q 009316 205 GLLQSTEEAVKLADELGFP-VMIKAT-AGGGGRGMRLAKEPDEFVKLLQQAKSEA 257 (537)
Q Consensus 205 ~~v~~~~~~~~~~~~ig~P-vvvKp~-~g~gg~Gv~~v~~~~el~~~~~~~~~~~ 257 (537)
+.|++++.+.+ +.|-- +++-|- .-+|..|.....+.++..+.+++..+..
T Consensus 170 --v~~~eeA~amA-~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~ 221 (286)
T 2p10_A 170 --VFSPEDAVAMA-KAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAA 221 (286)
T ss_dssp --ECSHHHHHHHH-HHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHH
T ss_pred --cCCHHHHHHHH-HcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHH
Confidence 67899988776 45533 344443 2345566666667766555555444433
No 277
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=74.76 E-value=4.8 Score=37.46 Aligned_cols=75 Identities=21% Similarity=0.147 Sum_probs=48.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL-ADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-~~d~ 146 (537)
.|++||.|. |.++..+++.+.+.|++++++..+.+...... .+ ..+.+.. +..+.+.+.++.++. ++|.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV-------DLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHTTCCCCCE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEE-------eCCCHHHHHHHHHHcCCCCE
Confidence 378999995 88999999999999999988864332111000 01 1123332 356777777777654 5898
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-.-|
T Consensus 80 vi~~Ag 85 (244)
T 3d3w_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 876544
No 278
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=74.71 E-value=5.4 Score=39.17 Aligned_cols=115 Identities=7% Similarity=-0.036 Sum_probs=58.8
Q ss_pred CCCCCCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 66 KVTCRQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 66 ~~~~~~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
|..++..||.|+|.|.++..+++++++. ++++++++ +.++... .. .+- ...+|.+ +.+. .++
T Consensus 4 M~~M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~-d~~~~~~-----~~---~g~--~~~~~~~---l~~~---~~~ 66 (304)
T 3bio_A 4 MTDDKKIRAAIVGYGNIGRYALQALREAPDFEIAGIV-RRNPAEV-----PF---ELQ--PFRVVSD---IEQL---ESV 66 (304)
T ss_dssp ----CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEE-CC---------------CCT--TSCEESS---GGGS---SSC
T ss_pred CccCCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEE-cCCHHHH-----HH---cCC--CcCCHHH---HHhC---CCC
Confidence 3333345899999999999999999884 78888765 2332211 11 111 1112333 2222 579
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCC
Q 009316 145 TMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 145 d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvp 198 (537)
|+|+-.... ..+.+.+..+.+.|..++--.|-......+-..+.+.+++.|+.
T Consensus 67 DvViiatp~-~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~ 119 (304)
T 3bio_A 67 DVALVCSPS-REVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAA 119 (304)
T ss_dssp CEEEECSCH-HHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCE
T ss_pred CEEEECCCc-hhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCE
Confidence 999865421 12345666667778876632221111222223344455555543
No 279
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=74.55 E-value=4.8 Score=38.06 Aligned_cols=76 Identities=9% Similarity=0.045 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCch-hh----ccC--EEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VK----LAD--ESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~-~~----~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~ 141 (537)
++|++||.|. +.++..+++.+.+.|+++++++......... .. ... ..+.+ +..+.+.+.+++++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~~~~~v~~~~~~ 78 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA-------DVTKKEDLHKIVEE 78 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEEC-------CTTSHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEe-------cCCCHHHHHHHHHH
Confidence 3588999994 7899999999999999999885433211000 00 011 12222 34556666555543
Q ss_pred c-----CCCEEEeCCC
Q 009316 142 R-----GCTMLHPGYG 152 (537)
Q Consensus 142 ~-----~~d~V~pg~g 152 (537)
. ++|.++-.-|
T Consensus 79 ~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 79 AMSHFGKIDFLINNAG 94 (264)
T ss_dssp HHHHHSCCCEEECCCC
T ss_pred HHHHhCCCCEEEECCc
Confidence 3 7999886555
No 280
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=74.48 E-value=3.2 Score=38.64 Aligned_cols=85 Identities=6% Similarity=0.027 Sum_probs=50.4
Q ss_pred CCEEEEEcCcHHHHHHHHH--HHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVRVIRT--AHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~a--a~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
.++|+|+|.|.++..+++. ... |++++++. +.|+...........+. . .+.+.+++++ ++|.|+
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~-D~dp~k~g~~i~gv~V~--------~---~~dl~ell~~-~ID~Vi 145 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFF-DVDPEKVGRPVRGGVIE--------H---VDLLPQRVPG-RIEIAL 145 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEE-ESCTTTTTCEETTEEEE--------E---GGGHHHHSTT-TCCEEE
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEE-eCCHHHHhhhhcCCeee--------c---HHhHHHHHHc-CCCEEE
Confidence 4689999999999999985 334 88888876 33333222223332221 1 2345566666 899887
Q ss_pred eCCCcccccHHHHHHHHHCCCc
Q 009316 149 PGYGFLAENAVFVEMCREHGIN 170 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~ 170 (537)
-..... ...+.++.+.+.|+.
T Consensus 146 IA~Ps~-~~~ei~~~l~~aGi~ 166 (211)
T 2dt5_A 146 LTVPRE-AAQKAADLLVAAGIK 166 (211)
T ss_dssp ECSCHH-HHHHHHHHHHHHTCC
T ss_pred EeCCch-hHHHHHHHHHHcCCC
Confidence 543221 123555666666655
No 281
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=74.24 E-value=6.2 Score=37.70 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|+++++++.+
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 4789999999999999999888643
No 282
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=74.10 E-value=4.8 Score=40.54 Aligned_cols=143 Identities=10% Similarity=0.050 Sum_probs=80.6
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~-ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+|.|.++.. .++.+++. +++++++.+ .+.......+ +....|.+.+++++ ...+|+|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~~~~~~~----------~~~~~~~~~~~ll~---~~~~D~V~ 72 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVAS-RDEEKVKRDL----------PDVTVIASPEAAVQ---HPDVDLVV 72 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC-SCHHHHHHHC----------TTSEEESCHHHHHT---CTTCSEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc-CCHHHHHhhC----------CCCcEECCHHHHhc---CCCCCEEE
Confidence 358999999999987 77888877 788887763 2221111111 11223667776653 45799988
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC-CCCHHHHHHHHH--hcCCcEE
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL-LQSTEEAVKLAD--ELGFPVM 225 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~-v~~~~~~~~~~~--~ig~Pvv 225 (537)
-... ...+.+.+..+.+.|..++.-.|-+.. ..+=..+.+.+++.|+..--++... ......+.+..+ .+|-+..
T Consensus 73 i~tp-~~~H~~~~~~al~aGk~Vl~EKPla~~-~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 150 (364)
T 3e82_A 73 IASP-NATHAPLARLALNAGKHVVVDKPFTLD-MQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAVKH 150 (364)
T ss_dssp ECSC-GGGHHHHHHHHHHTTCEEEECSCSCSS-HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHTTTCSEEE
T ss_pred EeCC-hHHHHHHHHHHHHCCCcEEEeCCCcCC-HHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcCCCcceEE
Confidence 6542 123467777788889877632221111 1111234556777887764332111 112344555554 4666666
Q ss_pred Eeec
Q 009316 226 IKAT 229 (537)
Q Consensus 226 vKp~ 229 (537)
+...
T Consensus 151 ~~~~ 154 (364)
T 3e82_A 151 FESH 154 (364)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 283
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=73.84 E-value=4.2 Score=41.80 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=29.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
-.||+|+|.|.++..+++.|+.+|.+|++++..+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4789999999999999999999999888775444
No 284
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=73.80 E-value=13 Score=36.29 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=22.8
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEE
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCV 98 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v 98 (537)
.+++|.|. |..+..+++.+++.|++.+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V 41 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIV 41 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEE
Confidence 46888896 8889999999999999944
No 285
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=73.75 E-value=3 Score=43.00 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=29.2
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
.|.++|+|+|.|..+.-++..+.+.|++|+++..
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 4567899999999999999999999999999964
No 286
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=73.69 E-value=6.8 Score=38.66 Aligned_cols=141 Identities=14% Similarity=0.125 Sum_probs=77.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+.||.|+|.|.++...++++++. +++++++++. +... ...++++. .+ ...|.+.+++++ ...+|+|+-
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~-~~~~-~~~~a~~~-~~-----~~~~~~~~~ll~---~~~~D~V~i 73 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR-TLES-AQAFANKY-HL-----PKAYDKLEDMLA---DESIDVIYV 73 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS-CSST-TCC---CC-CC-----SCEESCHHHHHT---CTTCCEEEE
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC-CHHH-HHHHHHHc-CC-----CcccCCHHHHhc---CCCCCEEEE
Confidence 45899999999999999999887 5677777632 2111 12222221 11 123667776653 357999885
Q ss_pred CCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC-CCCHHHHHHHHH--hcC
Q 009316 150 GYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL-LQSTEEAVKLAD--ELG 221 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~-v~~~~~~~~~~~--~ig 221 (537)
..-. ..+.+.+..+.+.|..++. .+.+..+ .+.+++++.|+..-.++... ......+.+..+ .+|
T Consensus 74 ~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~------~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~g~iG 146 (329)
T 3evn_A 74 ATIN-QDHYKVAKAALLAGKHVLVEKPFTLTYDQAN------ELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIG 146 (329)
T ss_dssp CSCG-GGHHHHHHHHHHTTCEEEEESSCCSSHHHHH------HHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHHTTTTC
T ss_pred CCCc-HHHHHHHHHHHHCCCeEEEccCCcCCHHHHH------HHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHhCCCCC
Confidence 5321 2346677777788886653 2222222 23445667777653332111 112334445444 456
Q ss_pred CcEEEeec
Q 009316 222 FPVMIKAT 229 (537)
Q Consensus 222 ~PvvvKp~ 229 (537)
-+..+...
T Consensus 147 ~i~~v~~~ 154 (329)
T 3evn_A 147 EVISISST 154 (329)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 66655544
No 287
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=73.58 E-value=15 Score=34.14 Aligned_cols=75 Identities=12% Similarity=0.070 Sum_probs=47.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH--cCCCEE
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS--RGCTML 147 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~--~~~d~V 147 (537)
.|++||.| .|.++..+++.+.+.|++++++..+.+. ....+.-..+..+ ..+ .+.+.+++.+.+ .++|.+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~D----~~~-~~~~~~~~~~~~~~g~id~l 74 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGAVPLPTD----LEK-DDPKGLVKRALEALGGLHVL 74 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTCEEEECC----TTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCcEEEecC----Cch-HHHHHHHHHHHHHcCCCCEE
Confidence 47899999 5889999999999999999988654432 1111111223221 122 456666554433 368988
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-.-|
T Consensus 75 v~~Ag 79 (239)
T 2ekp_A 75 VHAAA 79 (239)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86544
No 288
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=73.57 E-value=4.9 Score=38.71 Aligned_cols=76 Identities=13% Similarity=0.111 Sum_probs=46.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCch-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~---- 142 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.+.+..... ..+.. ..+.+ +..|.+.+.+++++.
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRV-------DVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 47899999 47799999999999999999886443211110 01111 22332 244555555544432
Q ss_pred -CCCEEEeCCCc
Q 009316 143 -GCTMLHPGYGF 153 (537)
Q Consensus 143 -~~d~V~pg~g~ 153 (537)
++|.++-.-|.
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 78988865543
No 289
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=73.53 E-value=3.8 Score=40.53 Aligned_cols=145 Identities=12% Similarity=0.046 Sum_probs=82.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
|+.||.|+|.|.++...++.+++. +++++++++ .+.. ....++++. + .. |.+.+++++ ...+|+|+
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~~~~~---~----~~-~~~~~~~l~---~~~~D~V~ 68 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVAD-AFPA-AAEAIAGAY---G----CE-VRTIDAIEA---AADIDAVV 68 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-SSHH-HHHHHHHHT---T----CE-ECCHHHHHH---CTTCCEEE
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEEC-CCHH-HHHHHHHHh---C----CC-cCCHHHHhc---CCCCCEEE
Confidence 457999999999999999999986 888887763 2211 111222211 1 11 566666553 45799988
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC-CCCHHHHHHHHHh--cCCcEE
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL-LQSTEEAVKLADE--LGFPVM 225 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~-v~~~~~~~~~~~~--ig~Pvv 225 (537)
-..- ...+.+.+..+.+.|..++.-.|-+. ...+-..+.+.+++.|+..--++... ......+.+..++ +|-+..
T Consensus 69 i~tp-~~~h~~~~~~al~~gk~v~~EKP~~~-~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 146 (331)
T 4hkt_A 69 ICTP-TDTHADLIERFARAGKAIFCEKPIDL-DAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGEVEM 146 (331)
T ss_dssp ECSC-GGGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTCSEEE
T ss_pred EeCC-chhHHHHHHHHHHcCCcEEEecCCCC-CHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCCceEE
Confidence 6542 12345677777788887653222111 01112234556788888765443211 1223455666554 787776
Q ss_pred Eeec
Q 009316 226 IKAT 229 (537)
Q Consensus 226 vKp~ 229 (537)
+...
T Consensus 147 ~~~~ 150 (331)
T 4hkt_A 147 VTIT 150 (331)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6643
No 290
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=73.42 E-value=12 Score=35.83 Aligned_cols=75 Identities=12% Similarity=0.050 Sum_probs=47.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-c-----cCEEEEcCCCCCCCCCCCHHHHHHHHHHc-
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L-----ADESVCIGEAPSSQSYLLIPNVLSAAISR- 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~-----ad~~~~i~~~~~~~sy~~~~~i~~~a~~~- 142 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.+.+....... + .-..+.+ +..|.+.+.+++++.
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC-------DVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEEC-------CTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEc-------CCCCHHHHHHHHHHHH
Confidence 47899999 4789999999999999999988754432211111 0 0122322 344555555554432
Q ss_pred ----CCCEEEeCCC
Q 009316 143 ----GCTMLHPGYG 152 (537)
Q Consensus 143 ----~~d~V~pg~g 152 (537)
++|.++-.-|
T Consensus 105 ~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 105 GELGGIDIAVCNAG 118 (276)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 7999886544
No 291
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=73.38 E-value=4.4 Score=35.81 Aligned_cols=33 Identities=9% Similarity=0.109 Sum_probs=29.6
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.+|+|+|.|..++.++..+.+.|.+++++...+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999996443
No 292
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=73.37 E-value=5.8 Score=37.40 Aligned_cols=34 Identities=12% Similarity=0.045 Sum_probs=28.6
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
|.|++||.| .+.++..+++.+.+.|++++++..+
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 347899999 5789999999999999999888643
No 293
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.25 E-value=27 Score=33.12 Aligned_cols=36 Identities=11% Similarity=0.027 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 68 ~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
....|++||.|. +.|+..+++.+.+.|+++++++..
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 344588999994 789999999999999999998654
No 294
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=73.21 E-value=10 Score=38.60 Aligned_cols=75 Identities=12% Similarity=-0.013 Sum_probs=46.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcC-CcEEEEecCCCCCCchh-hc-------cCEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHV-KL-------ADESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~G-i~~v~v~~~~d~~~~~~-~~-------ad~~~~i~~~~~~~sy~~~~~i~~~a~ 140 (537)
.|+|||.| .|.++..+++.+.+.| ++++++....+...... .+ ......+. .+..|.+.+..+..
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~-----~Dl~d~~~~~~~~~ 109 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFA-----LDIGSIEYDAFIKA 109 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEEC-----CCTTSHHHHHHHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEE-----EeCCCHHHHHHHHH
Confidence 47899999 5999999999999999 67777743221110000 00 01222221 24566666666666
Q ss_pred HcCCCEEEeC
Q 009316 141 SRGCTMLHPG 150 (537)
Q Consensus 141 ~~~~d~V~pg 150 (537)
..++|.|+-.
T Consensus 110 ~~~~D~Vih~ 119 (399)
T 3nzo_A 110 DGQYDYVLNL 119 (399)
T ss_dssp CCCCSEEEEC
T ss_pred hCCCCEEEEC
Confidence 6789998744
No 295
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=73.19 E-value=3.7 Score=38.04 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=28.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
+++||+|+|.|.++..+++.+.+.|++++++..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeC
Confidence 356899999999999999999999999887743
No 296
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=73.17 E-value=3.8 Score=41.11 Aligned_cols=31 Identities=10% Similarity=0.025 Sum_probs=28.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
+||+|+|.|..+.-++..+++.|++|+++..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 5899999999999999999999999999843
No 297
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=73.15 E-value=2.3 Score=41.24 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=29.4
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
|||||.|. |.++..+++.+.+.|++|++++...+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 35 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSS 35 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 57999996 99999999999999999999864433
No 298
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=73.13 E-value=6.5 Score=36.73 Aligned_cols=75 Identities=12% Similarity=0.076 Sum_probs=46.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hcc-C--EEEEcCCCCCCCCCCCHHHHHHHHHH----
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLA-D--ESVCIGEAPSSQSYLLIPNVLSAAIS---- 141 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~a-d--~~~~i~~~~~~~sy~~~~~i~~~a~~---- 141 (537)
.|++||.| .|.++..+++.+.+.|++++++..+.+...... .+. + ..+.. +..+.+.+.+++++
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVA-------DVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEE-------ecCCHHHHHHHHHHHHhh
Confidence 47899999 588999999999999999998864432111000 011 1 22322 34566666555543
Q ss_pred cCCCEEEeCCC
Q 009316 142 RGCTMLHPGYG 152 (537)
Q Consensus 142 ~~~d~V~pg~g 152 (537)
.++|.|+-.-|
T Consensus 84 ~~id~li~~Ag 94 (254)
T 2wsb_A 84 APVSILVNSAG 94 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCc
Confidence 47898876544
No 299
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=73.09 E-value=8.6 Score=35.65 Aligned_cols=35 Identities=11% Similarity=0.298 Sum_probs=30.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
.|++||.| .|.++..+++.+.+.|++++++..+.+
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 38 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN 38 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 47899999 578999999999999999999876544
No 300
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=72.94 E-value=9.9 Score=37.83 Aligned_cols=106 Identities=9% Similarity=-0.054 Sum_probs=50.8
Q ss_pred CCCCCCCCEEEEEcC------cH---HHHHHHHHHHHcCCcEEEEecCCCCCC-chh-hccCEEEEcCCCCCC-CCCC--
Q 009316 65 LKVTCRQEKILVANR------GE---IAVRVIRTAHEMGIPCVAVYSTIDKDA-LHV-KLADESVCIGEAPSS-QSYL-- 130 (537)
Q Consensus 65 ~~~~~~~~~iLI~~~------g~---ia~~ii~aa~~~Gi~~v~v~~~~d~~~-~~~-~~ad~~~~i~~~~~~-~sy~-- 130 (537)
++...+++|||++.. |. ....+++++++.|++|.++........ ... ......+.+...... .-..
T Consensus 14 ~~~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (406)
T 2gek_A 14 LVPRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGP 93 (406)
T ss_dssp -------CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCH
T ss_pred cccCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccH
Confidence 334444678888873 21 356889999999999998876544321 110 000011111100000 0011
Q ss_pred -CHHHHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 131 -LIPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 131 -~~~~i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
....+.++.++.++|.||.......-. ...++...+++++
T Consensus 94 ~~~~~l~~~l~~~~~Dii~~~~~~~~~~--~~~~~~~~~~~~i 134 (406)
T 2gek_A 94 ATHRKVKKWIAEGDFDVLHIHEPNAPSL--SMLALQAAEGPIV 134 (406)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCCSSSH--HHHHHHHEESSEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCccchHH--HHHHHHhcCCCEE
Confidence 125677888888999999654332221 2233344566654
No 301
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=72.81 E-value=6.7 Score=37.12 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=30.1
Q ss_pred CCCCEEEEEcC-c-HHHHHHHHHHHHcCCcEEEEecCC
Q 009316 69 CRQEKILVANR-G-EIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 69 ~~~~~iLI~~~-g-~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
...|++||.|. | .++..+++.+.+.|+++++++.+.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 34578999998 6 599999999999999999886443
No 302
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=72.78 E-value=14 Score=35.11 Aligned_cols=75 Identities=9% Similarity=0.000 Sum_probs=46.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLA--DESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~a--d~~~~i~~~~~~~sy~~~~~i~~~a~~~---- 142 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.+...... .+. -..+.+ +..+.+.+.+++++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV-------DLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEEC-------CCCCHHHHHHHHHHHHHHc
Confidence 478999995 78999999999999999998865543221111 111 122222 244555555544432
Q ss_pred -CCCEEEeCCC
Q 009316 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~pg~g 152 (537)
++|.++-.-|
T Consensus 84 g~id~lv~nAg 94 (271)
T 3tzq_B 84 GRLDIVDNNAA 94 (271)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898876544
No 303
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=72.77 E-value=5.1 Score=38.26 Aligned_cols=35 Identities=6% Similarity=-0.014 Sum_probs=29.5
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.+.|++||.| .|.++..+++.+.+.|+++++++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457899999 4889999999999999999988654
No 304
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=72.74 E-value=3 Score=37.65 Aligned_cols=76 Identities=13% Similarity=0.169 Sum_probs=45.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
.++|||.| .|.++..+++.++..|.+++++..+.+.......+ ++..+... +....+.+.+.....++|.++
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~------~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSR------SVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETT------CSTHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCC------cHHHHHHHHHHhCCCCCeEEE
Confidence 57899999 69999999999999999988886443321111111 23333211 111234444443334688888
Q ss_pred eCCC
Q 009316 149 PGYG 152 (537)
Q Consensus 149 pg~g 152 (537)
-..|
T Consensus 113 ~~~g 116 (198)
T 1pqw_A 113 NSLA 116 (198)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 5544
No 305
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=72.43 E-value=1.7 Score=42.47 Aligned_cols=73 Identities=16% Similarity=0.193 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE-E
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM-L 147 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~-V 147 (537)
+|.+-=||+|.|..-..+++++++.|+.++++.-....+.....+++..+.+ ..+..+++..++.+++- +
T Consensus 3 mM~kigIIAG~G~LP~~iak~a~~~G~~~~ii~l~g~~d~~l~~~~~~~i~i---------g~~G~ii~~lk~~~v~~vv 73 (283)
T 4ggi_A 3 MMRKLGLIAGGGALPVELASHCEAAGRAFAVMRLRSFADPSLDRYPGADVGI---------GEFGKIFKALRAEGCDVVC 73 (283)
T ss_dssp -CCCCEEEECSSSTTTTTTTHHHHTTCCCCEEEETTTCCSTTTTSSEEEECT---------TCTTHHHHHHHHHTCCCEE
T ss_pred CCccEEEEEcCCccHHHHHHHHHHCCCCeEEEEeCCCCchhhhhCCceEEcH---------HHHHHHHHHHHHhchhhee
Confidence 3444467899999999999999999999877654443333334455555543 34668999999999874 4
Q ss_pred EeC
Q 009316 148 HPG 150 (537)
Q Consensus 148 ~pg 150 (537)
+.|
T Consensus 74 maG 76 (283)
T 4ggi_A 74 FAG 76 (283)
T ss_dssp EES
T ss_pred eec
Confidence 444
No 306
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=72.42 E-value=9 Score=38.35 Aligned_cols=138 Identities=11% Similarity=-0.016 Sum_probs=80.0
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~-ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+|.|.++.. .++.+++. ++++++|++ .+... .+.+. +....|.+.+++++ ...+|+|+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~~----~~~~~------~~~~~~~~~~~ll~---~~~vD~V~ 70 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVE-RSKEL----SKERY------PQASIVRSFKELTE---DPEIDLIV 70 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEEC-SSCCG----GGTTC------TTSEEESCSHHHHT---CTTCCEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc-CCHHH----HHHhC------CCCceECCHHHHhc---CCCCCEEE
Confidence 358999999999987 67888777 888888763 33222 12111 01123566666653 35699998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCc-CCCCHHHHHHHHHh--c
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSDG-LLQSTEEAVKLADE--L 220 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~-~v~~~~~~~~~~~~--i 220 (537)
-..-. ..+.+.+..+.+.|..++. .+.+..+ .+.+++++.|+.+--++.. .......+.+.+++ +
T Consensus 71 i~tp~-~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~------~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i 143 (362)
T 3fhl_A 71 VNTPD-NTHYEYAGMALEAGKNVVVEKPFTSTTKQGE------ELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLL 143 (362)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEEESSCCSSHHHHH------HHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred EeCCh-HHHHHHHHHHHHCCCeEEEecCCCCCHHHHH------HHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHcCCC
Confidence 65422 2346777788888987653 2333222 3445667777766433211 11223445555543 6
Q ss_pred CCcEEEeec
Q 009316 221 GFPVMIKAT 229 (537)
Q Consensus 221 g~PvvvKp~ 229 (537)
|-+..+...
T Consensus 144 G~i~~v~~~ 152 (362)
T 3fhl_A 144 GRLVEYEST 152 (362)
T ss_dssp SSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 666666554
No 307
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=72.40 E-value=3.2 Score=41.69 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=48.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++.-+++.|+.+ |.+++++...++......++ +|+.+... +. ..+.+.++....++|.|
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~--~~~~v~~~~~g~g~Dvv 258 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-----RD--PVKQVMELTRGRGVNVA 258 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT-----SC--HHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEecc-----ch--HHHHHHHHhCCCCCcEE
Confidence 457999999999999999999999 99988886544332222233 55555311 11 22344444333478999
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-..|
T Consensus 259 id~~G 263 (359)
T 1h2b_A 259 MDFVG 263 (359)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 96655
No 308
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=72.35 E-value=3.3 Score=43.35 Aligned_cols=116 Identities=7% Similarity=0.064 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCc-hhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~-~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
...++|+|+|+|.++.++++.+.+ ++.+.++..+.+.... ...+-+..+..| +..|.+-+.+ +.-..+|++
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~~r~~~la~~l~~~~Vi~G------D~td~~~L~e-e~i~~~D~~ 304 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNLQRAEKLSEELENTIVFCG------DAADQELLTE-ENIDQVDVF 304 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHCTTSEEEES------CTTCHHHHHH-TTGGGCSEE
T ss_pred ccccEEEEEcchHHHHHHHHHhhh-cCceEEEecCHHHHHHHHHHCCCceEEec------cccchhhHhh-cCchhhcEE
Confidence 347899999999999999999854 6888888544432211 122233334333 3455544443 333568888
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCC
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpv 199 (537)
+...+---.|....-.++++|.+-+ +.+..|. ....++++.|+.+
T Consensus 305 ia~T~~De~Ni~~~llAk~~gv~kv------Ia~vn~~-~~~~l~~~~gid~ 349 (461)
T 4g65_A 305 IALTNEDETNIMSAMLAKRMGAKKV------MVLIQRG-AYVDLVQGGVIDV 349 (461)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCSEE------EEECSCH-HHHHHHCSSSSCE
T ss_pred EEcccCcHHHHHHHHHHHHcCCccc------ccccccc-chhhhhhccccce
Confidence 8877654445455555666665422 2222232 3334556666654
No 309
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=72.30 E-value=3.9 Score=41.00 Aligned_cols=73 Identities=15% Similarity=0.046 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++.-+++.|+.+|.+++++...++...... ++ +|..+. |.+.+.+.++. .++|.|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~---------~~~~~~~~~~~--~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVI---------GSDQAKMSELA--DSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEE---------TTCHHHHHHST--TTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeec---------cccHHHHHHhc--CCCCEE
Confidence 457999999999999999999999999888865544322222 22 454443 33444444432 378999
Q ss_pred EeCCCc
Q 009316 148 HPGYGF 153 (537)
Q Consensus 148 ~pg~g~ 153 (537)
+-..|.
T Consensus 249 id~~g~ 254 (357)
T 2cf5_A 249 IDTVPV 254 (357)
T ss_dssp EECCCS
T ss_pred EECCCC
Confidence 876653
No 310
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=72.26 E-value=7 Score=37.04 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|+++++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999999988644
No 311
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=71.89 E-value=4.8 Score=39.88 Aligned_cols=142 Identities=11% Similarity=0.062 Sum_probs=85.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+.||.|+|.|.++...++++++. +++++++++ .+.. ....++++. + ....|.+.+++++ ...+|+|+-
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~~~~~---~---~~~~~~~~~~ll~---~~~~D~V~i 73 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIAS-RRLE-NAQKMAKEL---A---IPVAYGSYEELCK---DETIDIIYI 73 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBC-SSSH-HHHHHHHHT---T---CCCCBSSHHHHHH---CTTCSEEEE
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEe-CCHH-HHHHHHHHc---C---CCceeCCHHHHhc---CCCCCEEEE
Confidence 46899999999999999999996 778887753 2211 112222221 1 0124667766653 457999886
Q ss_pred CCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC-CCCHHHHHHHHH--hcC
Q 009316 150 GYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL-LQSTEEAVKLAD--ELG 221 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~-v~~~~~~~~~~~--~ig 221 (537)
..- ...+.+.+..+.+.|..++- .+.+..+ .+.+.+++.|+..-.++... ......+.+..+ .+|
T Consensus 74 ~tp-~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~------~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG 146 (330)
T 3e9m_A 74 PTY-NQGHYSAAKLALSQGKPVLLEKPFTLNAAEAE------ELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGLG 146 (330)
T ss_dssp CCC-GGGHHHHHHHHHHTTCCEEECSSCCSSHHHHH------HHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTTC
T ss_pred cCC-CHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHH------HHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCCC
Confidence 542 22346677777788886653 2333332 34566788888765443211 223455666665 577
Q ss_pred CcEEEeecC
Q 009316 222 FPVMIKATA 230 (537)
Q Consensus 222 ~PvvvKp~~ 230 (537)
-+..+....
T Consensus 147 ~i~~i~~~~ 155 (330)
T 3e9m_A 147 EILWVQSVT 155 (330)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 777776543
No 312
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=71.83 E-value=3 Score=41.22 Aligned_cols=79 Identities=22% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.| .|.++..+++.|+.+|.+++++..+++......++ +|..+... +....+.+.+.....++|.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~------~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYS------HEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCC------CccHHHHHHHHhCCCCceE
Confidence 3468999999 79999999999999999988886544322222222 45544321 1122445555554457999
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
|+-..|.
T Consensus 213 vid~~g~ 219 (325)
T 3jyn_A 213 VYDGVGQ 219 (325)
T ss_dssp EEESSCG
T ss_pred EEECCCh
Confidence 9976664
No 313
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=71.80 E-value=6.7 Score=36.37 Aligned_cols=75 Identities=20% Similarity=0.125 Sum_probs=48.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-ccC-EEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LAD-ESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~ad-~~~~i~~~~~~~sy~~~~~i~~~a~~~-~~d~ 146 (537)
.|++||.|. |.++..+++.+.+.|++++++..+.+....... ... +.+.. +..+.+.+.++.++. ++|.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCV-------DLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHTTCCCCSE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEe-------cCCCHHHHHHHHHHcCCCCE
Confidence 478999995 889999999999999999888643321110000 111 22322 356777777777654 4798
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-.-|
T Consensus 80 vi~~Ag 85 (244)
T 1cyd_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 875544
No 314
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=71.72 E-value=4.5 Score=40.98 Aligned_cols=38 Identities=8% Similarity=0.159 Sum_probs=31.6
Q ss_pred CCCCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 66 KVTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
|..++..+|+|+|+|..+..++..+++.|++|+++...
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 54455568999999999999999999999999999644
No 315
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=71.66 E-value=4.8 Score=40.19 Aligned_cols=148 Identities=9% Similarity=-0.033 Sum_probs=82.6
Q ss_pred CCCEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~-~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
|+.||.|+|.|.++. ..++.+++. ++++++|++.. ....++++. .+ +....|.+.+++++ ...+|+|
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~----~~~~~a~~~-~~---~~~~~~~~~~~ll~---~~~~D~V 69 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH----VNEKAAAPF-KE---KGVNFTADLNELLT---DPEIELI 69 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT----CCHHHHHHH-HT---TTCEEESCTHHHHS---CTTCCEE
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC----HHHHHHHhh-CC---CCCeEECCHHHHhc---CCCCCEE
Confidence 456899999999998 567777776 78888887433 122332210 00 11123566666654 3569998
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC-CCCHHHHHHHHH--hcCCcE
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL-LQSTEEAVKLAD--ELGFPV 224 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~-v~~~~~~~~~~~--~ig~Pv 224 (537)
+-.... ..+.+.+..+.+.|.+++.-.|-+. ...+=..+.+++++.|+.+--++... ......+.+..+ .+|-+.
T Consensus 70 ~i~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~-~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~ 147 (349)
T 3i23_A 70 TICTPA-HTHYDLAKQAILAGKSVIVEKPFCD-TLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEIN 147 (349)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEE
T ss_pred EEeCCc-HHHHHHHHHHHHcCCEEEEECCCcC-CHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCEE
Confidence 865422 2346777777888987663222211 11112234556777887764432111 112344555544 467676
Q ss_pred EEeecC
Q 009316 225 MIKATA 230 (537)
Q Consensus 225 vvKp~~ 230 (537)
.+....
T Consensus 148 ~~~~~~ 153 (349)
T 3i23_A 148 EVETHI 153 (349)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 666543
No 316
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=71.26 E-value=7 Score=37.53 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=29.1
Q ss_pred CCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~---g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||.|. +.|+..+++.+.+.|++|++++.+.
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 478999996 5899999999999999999886543
No 317
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=71.20 E-value=12 Score=37.12 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=30.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
..++|.|+|-|.++..+++.++.+|+++++++...
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~ 170 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTG 170 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 35899999999999999999999999988875443
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=71.19 E-value=8.3 Score=38.82 Aligned_cols=78 Identities=13% Similarity=0.083 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCC-HHHHHHHHHHcCCC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLL-IPNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~-~~~i~~~a~~~~~d 145 (537)
..-++|||.|.|.++.-.++.|+.+|. +++++...++......++ +|..+.. .+...+ .+.+.++... ++|
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~-----~~~~~~~~~~i~~~~~g-g~D 265 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNP-----KDHDKPIQEVIVDLTDG-GVD 265 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECG-----GGCSSCHHHHHHHHTTS-CBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEcc-----ccCchhHHHHHHHhcCC-CCC
Confidence 345789999999999999999999999 788885444443333333 4544421 111123 3344444433 899
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+-..|
T Consensus 266 ~vid~~g 272 (378)
T 3uko_A 266 YSFECIG 272 (378)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9996655
No 319
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=71.00 E-value=13 Score=35.62 Aligned_cols=80 Identities=15% Similarity=0.109 Sum_probs=48.4
Q ss_pred CCCCCCCEEEEEcC-cH--HHHHHHHHHHHcCCcEEEEecCCCCCCchhhc----cC-EEEEcCCCCCCCCCCCHHHHHH
Q 009316 66 KVTCRQEKILVANR-GE--IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL----AD-ESVCIGEAPSSQSYLLIPNVLS 137 (537)
Q Consensus 66 ~~~~~~~~iLI~~~-g~--ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~----ad-~~~~i~~~~~~~sy~~~~~i~~ 137 (537)
|.....|++||.|. |. ++..+++.+.+.|+++++++.+. .......+ .. ..+.+ +..+.+.+.+
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~-------Dl~~~~~v~~ 92 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPC-------DVISDQEIKD 92 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEEC-------CTTCHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEe-------ecCCHHHHHH
Confidence 44455689999994 34 99999999999999999886544 11111111 11 22332 2445555555
Q ss_pred HHHHc-----CCCEEEeCCCc
Q 009316 138 AAISR-----GCTMLHPGYGF 153 (537)
Q Consensus 138 ~a~~~-----~~d~V~pg~g~ 153 (537)
++++. ++|.++-.-|.
T Consensus 93 ~~~~~~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 93 LFVELGKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHHHHHHCSSCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCcc
Confidence 54432 68988866554
No 320
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=70.95 E-value=5.6 Score=39.56 Aligned_cols=142 Identities=13% Similarity=0.134 Sum_probs=78.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
|+.||.|+|.|.++...++++++. +++++++++ .+.. ....+++.. + ....|.+.+++++ ...+|+|+
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~~~~~---~---~~~~~~~~~~ll~---~~~~D~V~ 69 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISD-VRED-RLREMKEKL---G---VEKAYKDPHELIE---DPNVDAVL 69 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEEC-SCHH-HHHHHHHHH---T---CSEEESSHHHHHH---CTTCCEEE
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEEC-CCHH-HHHHHHHHh---C---CCceeCCHHHHhc---CCCCCEEE
Confidence 456899999999999999999886 778887763 2211 111222210 0 0112566666553 45799988
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC-CCCHHHHHHHHH--hc
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL-LQSTEEAVKLAD--EL 220 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~-v~~~~~~~~~~~--~i 220 (537)
-.... ..+.+.+..+.+.|..++- .+.+..+ .+.+++++.|+..-.++... ......+.+..+ .+
T Consensus 70 i~tp~-~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~------~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i 142 (344)
T 3ezy_A 70 VCSST-NTHSELVIACAKAKKHVFCEKPLSLNLADVD------RMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI 142 (344)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEEESCSCSCHHHHH------HHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred EcCCC-cchHHHHHHHHhcCCeEEEECCCCCCHHHHH------HHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence 65422 2345666777778876552 2333322 24456677777654432111 112334445444 36
Q ss_pred CCcEEEeec
Q 009316 221 GFPVMIKAT 229 (537)
Q Consensus 221 g~PvvvKp~ 229 (537)
|-+..+...
T Consensus 143 G~i~~~~~~ 151 (344)
T 3ezy_A 143 GKPHVLRIT 151 (344)
T ss_dssp SSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 666666654
No 321
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=70.80 E-value=7 Score=38.69 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=26.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCc-EEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIP-CVAVY 101 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~-~v~v~ 101 (537)
.+++||+|.|..+..++.++.++|.+ ++++.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~n 185 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFN 185 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEE
Confidence 47999999999999999999999994 55553
No 322
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=70.76 E-value=16 Score=36.61 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=29.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.++|.|+|-|.++..+++.++.+|++|++++..
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~ 180 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVA 180 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCCEEEEECCC
Confidence 579999999999999999999999998887543
No 323
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=70.75 E-value=4.7 Score=41.16 Aligned_cols=35 Identities=6% Similarity=0.036 Sum_probs=29.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCc--EEEEecCC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIP--CVAVYSTI 104 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~--~v~v~~~~ 104 (537)
|+++|+|+|.|..+...++.+++.|++ ++++..++
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 457999999999999999999999998 88886444
No 324
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=70.65 E-value=10 Score=35.72 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=46.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLA--DESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~a--d~~~~i~~~~~~~sy~~~~~i~~~a~~~---- 142 (537)
.|++||.| .|.++..+++.+.+.|+++++++.+.+...... .+. -..+.. +..|.+.+.+++++.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEV-------DVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEE-------eCCCHHHHHHHHHHHHHHc
Confidence 47899999 578999999999999999998864332111000 011 122322 344555555554432
Q ss_pred -CCCEEEeCCC
Q 009316 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~pg~g 152 (537)
++|.++-.-|
T Consensus 85 g~iD~lv~~Ag 95 (263)
T 3ak4_A 85 GGFDLLCANAG 95 (263)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7998886544
No 325
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=70.64 E-value=22 Score=35.59 Aligned_cols=111 Identities=15% Similarity=0.222 Sum_probs=72.0
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeC----------CC--c-----------------cccc--HHHHHHHHHCCCceeCCC
Q 009316 127 QSYLLIPNVLSAAISRGCTMLHPG----------YG--F-----------------LAEN--AVFVEMCREHGINFIGPN 175 (537)
Q Consensus 127 ~sy~~~~~i~~~a~~~~~d~V~pg----------~g--~-----------------lsE~--~~~a~~~e~~Gl~~iGp~ 175 (537)
.|..-..++++.+++.|+|+|=-+ |. | +++. ..+.++|++.|+.|+-..
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~ 111 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL 111 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee
Confidence 445556678888999999998532 11 1 1221 467788899999887322
Q ss_pred HHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCCCcceEEeCCHHHHHHHHHHHHH
Q 009316 176 PDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKS 255 (537)
Q Consensus 176 ~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~ 255 (537)
-|... -+++.+.|+++..=-....++..-+.+. .+.|-|+++| +||. +.+|+..+++.+..
T Consensus 112 -------~d~~s-vd~l~~~~v~~~KI~S~~~~n~~LL~~v-a~~gkPviLs-------tGma---t~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 112 -------FSRAA-ALRLQRMDIPAYKIGSGECNNYPLIKLV-ASFGKPIILS-------TGMN---SIESIKKSVEIIRE 172 (349)
T ss_dssp -------CSHHH-HHHHHHHTCSCEEECGGGTTCHHHHHHH-HTTCSCEEEE-------CTTC---CHHHHHHHHHHHHH
T ss_pred -------CCHHH-HHHHHhcCCCEEEECcccccCHHHHHHH-HhcCCeEEEE-------CCCC---CHHHHHHHHHHHHH
Confidence 23222 2456777777633211445666655544 4579999998 6773 89999999988765
Q ss_pred H
Q 009316 256 E 256 (537)
Q Consensus 256 ~ 256 (537)
.
T Consensus 173 ~ 173 (349)
T 2wqp_A 173 A 173 (349)
T ss_dssp H
T ss_pred c
Confidence 4
No 326
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=70.63 E-value=11 Score=36.27 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=30.2
Q ss_pred CCCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009316 65 LKVTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 65 ~~~~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
.+...+.|++||.|. +.|+..+++.+.+.|+++++++.
T Consensus 19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 455566789999994 78999999999999999988853
No 327
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=70.58 E-value=31 Score=32.72 Aligned_cols=35 Identities=9% Similarity=0.023 Sum_probs=29.9
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
...|++||.| .+.|+..+++.+.+.|+++++++.+
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 3458899999 5789999999999999999988654
No 328
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=70.49 E-value=3.7 Score=38.81 Aligned_cols=75 Identities=11% Similarity=-0.028 Sum_probs=45.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc---cCEEEEcCCCCCCCCCCCHHHHHHHHHHc--CC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL---ADESVCIGEAPSSQSYLLIPNVLSAAISR--GC 144 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~---ad~~~~i~~~~~~~sy~~~~~i~~~a~~~--~~ 144 (537)
||++||.| .+.++..+++.+.+.|+++++++.+.+.......+ ......+ +..+++++++.+.+. ++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-------d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-------SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-------CCCSHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-------CHHHHHHHHHHHHHHhCCC
Confidence 47899999 47799999999999999988875443321111001 0111211 345666666655432 68
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|.++-.-|
T Consensus 74 D~lv~nAg 81 (254)
T 1zmt_A 74 DVLVSNDI 81 (254)
T ss_dssp CEEEEECC
T ss_pred CEEEECCC
Confidence 98875544
No 329
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=70.46 E-value=5.5 Score=38.41 Aligned_cols=78 Identities=13% Similarity=0.124 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-~~d~ 146 (537)
..|++||.|. +.|+..+++.+.+.|+++++++.+.+...... .+......+. -+..+.+.+.+++++. ++|.
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRE-----LDLQDLSSVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEE-----CCTTCHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEE-----cCCCCHHHHHHHHHhcCCCCE
Confidence 3578999994 78999999999999999998864432211111 1111222211 1456788888888765 6788
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
++-.-|
T Consensus 90 lv~nAg 95 (291)
T 3rd5_A 90 LINNAG 95 (291)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 775544
No 330
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=70.26 E-value=19 Score=33.29 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=30.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
.|++||.| .+.++..+++.+.+.|++++++..+.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 47899999 578999999999999999999876544
No 331
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=70.26 E-value=5.7 Score=37.63 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=28.6
Q ss_pred CCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~---g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.++..+++.+.+.|+++++++.+
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 478999996 589999999999999999988644
No 332
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=70.23 E-value=11 Score=37.43 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=47.3
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHH-HHHHHHHcCCC
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPN-VLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~-i~~~a~~~~~d 145 (537)
...++|||.|. |.++..+++.++.+|.+++++..+.+.......+ ++..+... +..+..+ +.++... ++|
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~------~~~~~~~~~~~~~~~-~~D 240 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFT------KEKDIVGAVLKATDG-GAH 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETT------TCSCHHHHHHHHHTS-CEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecC------ccHhHHHHHHHHhCC-CCC
Confidence 34589999997 8999999999999999988886544322222222 34333221 1123333 3333333 799
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+-..|
T Consensus 241 ~vi~~~g 247 (347)
T 2hcy_A 241 GVINVSV 247 (347)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 9986654
No 333
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=70.23 E-value=2.7 Score=42.01 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.|.++.-.++.|+.+|. +++++.+.++......++ +|..+.. .+....+.+.++....++|.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~------~~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINY------KNGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECG------GGSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcC------CCcCHHHHHHHHcCCCCCCE
Confidence 345789999999999999999999999 788875443322222333 4444421 11122445555554557999
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-..|
T Consensus 239 v~d~~g 244 (352)
T 3fpc_A 239 VVIAGG 244 (352)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 986554
No 334
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=70.23 E-value=4.4 Score=40.59 Aligned_cols=140 Identities=11% Similarity=0.041 Sum_probs=76.8
Q ss_pred CCEEEEEcCcHHHH-HHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~-~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
..||.|+|.|.++. ..++++++. |++++++++. +.. ....++++. -+ ..|.+.++++ ....+|+|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~-~~~-~~~~~a~~~-g~------~~~~~~~~ll---~~~~~D~V~ 94 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR-RWD-RAKRFTERF-GG------EPVEGYPALL---ERDDVDAVY 94 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES-SHH-HHHHHHHHH-CS------EEEESHHHHH---TCTTCSEEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC-CHH-HHHHHHHHc-CC------CCcCCHHHHh---cCCCCCEEE
Confidence 46899999999998 689999988 8888877632 211 111222211 01 1234555554 345689988
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCc-CCCCHHHHHHHHH--hc
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSDG-LLQSTEEAVKLAD--EL 220 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~-~v~~~~~~~~~~~--~i 220 (537)
-..- ...+.+.+..+.+.|..++. .+.+..+ .+.+++++.|+..-.++.. .......+.+..+ .+
T Consensus 95 i~tp-~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~------~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i 167 (350)
T 3rc1_A 95 VPLP-AVLHAEWIDRALRAGKHVLAEKPLTTDRPQAE------RLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVI 167 (350)
T ss_dssp ECCC-GGGHHHHHHHHHHTTCEEEEESSSCSSHHHHH------HHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTT
T ss_pred ECCC-cHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHH------HHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCC
Confidence 6532 12345677777788876553 2222222 2344566677665433211 1223344555544 45
Q ss_pred CCcEEEeec
Q 009316 221 GFPVMIKAT 229 (537)
Q Consensus 221 g~PvvvKp~ 229 (537)
|-+..+...
T Consensus 168 G~i~~v~~~ 176 (350)
T 3rc1_A 168 GEIRSFAAS 176 (350)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 655555544
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=70.09 E-value=3.7 Score=41.22 Aligned_cols=78 Identities=18% Similarity=0.198 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
...++|||.|.|.++.-+++.|+.+|.+++++...++......++ +|..+. . +.....+.+.++....++|.|
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~-----~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGIN-R-----LEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEE-T-----TTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEc-C-----CcccHHHHHHHHhCCCCceEE
Confidence 346899999999999999999999999998886543332222233 455443 1 111224556665555689999
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-..|
T Consensus 262 id~~g 266 (363)
T 3uog_A 262 LEIAG 266 (363)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 87665
No 336
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=70.08 E-value=7.7 Score=36.76 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=28.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 49 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA 49 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 47899999 5889999999999999999888543
No 337
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=70.04 E-value=6.8 Score=37.51 Aligned_cols=34 Identities=6% Similarity=0.071 Sum_probs=29.1
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 4789999999999999999988644
No 338
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=70.04 E-value=6.7 Score=39.16 Aligned_cols=79 Identities=18% Similarity=0.116 Sum_probs=46.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++.-+++.|+.+|. +++++...++......++ +|..+... . .+.....+.+.+... .++|.|
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~--~-~~~~~~~~~i~~~~~-~g~D~v 246 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS--K-ESPQEIARKVEGQLG-CKPEVT 246 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECS--S-CCHHHHHHHHHHHHT-SCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCc--c-cccchHHHHHHHHhC-CCCCEE
Confidence 45799999999999999999999999 777775443322222222 45444310 0 000011223333332 579999
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-..|
T Consensus 247 id~~g 251 (356)
T 1pl8_A 247 IECTG 251 (356)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 96655
No 339
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=69.95 E-value=8.9 Score=36.49 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=28.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++++++..+
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999999888644
No 340
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=69.88 E-value=37 Score=32.49 Aligned_cols=147 Identities=20% Similarity=0.233 Sum_probs=93.1
Q ss_pred HHHHHHHHHHH-c-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc---CCCEEEeCCCcccc
Q 009316 82 IAVRVIRTAHE-M-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR---GCTMLHPGYGFLAE 156 (537)
Q Consensus 82 ia~~ii~aa~~-~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~---~~d~V~pg~g~lsE 156 (537)
-|+++++-+|+ + |..-|=+.--+| ..--+.|....++++++. |+..+. +...
T Consensus 88 eAv~~a~lare~~~~~~~iKlEv~~d-------------------~~~llpD~~~tv~aa~~L~~~Gf~Vlp----y~~d 144 (265)
T 1wv2_A 88 EAVRTCRLARELLDGHNLVKLEVLAD-------------------QKTLFPNVVETLKAAEQLVKDGFDVMV----YTSD 144 (265)
T ss_dssp HHHHHHHHHHTTTTSCCEEEECCBSC-------------------TTTCCBCHHHHHHHHHHHHTTTCEEEE----EECS
T ss_pred HHHHHHHHHHHHcCCCCeEEEEeecC-------------------ccccCcCHHHHHHHHHHHHHCCCEEEE----EeCC
Confidence 48888999999 4 343333311111 111246788888888876 776654 2337
Q ss_pred cHHHHHHHHHCCCceeCCCHHHH---HHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCC
Q 009316 157 NAVFVEMCREHGINFIGPNPDSI---RIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGG 233 (537)
Q Consensus 157 ~~~~a~~~e~~Gl~~iGp~~~~i---~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~g 233 (537)
++.+++.+++.|..++-|-..-+ .-..|....+.+.+..++|+.-. .-+.+++++....+ +|.--|+ -
T Consensus 145 d~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~e--GGI~TPsDAa~Ame-LGAdgVl------V 215 (265)
T 1wv2_A 145 DPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVD--AGVGTASDAAIAME-LGCEAVL------M 215 (265)
T ss_dssp CHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEE--SCCCSHHHHHHHHH-HTCSEEE------E
T ss_pred CHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEe--CCCCCHHHHHHHHH-cCCCEEE------E
Confidence 78999999999987664411111 12247777788888788998765 66788888877664 5543322 1
Q ss_pred CcceEEeCCHHHHHHHHHHHHHHHHHh
Q 009316 234 GRGMRLAKEPDEFVKLLQQAKSEAAAA 260 (537)
Q Consensus 234 g~Gv~~v~~~~el~~~~~~~~~~~~~~ 260 (537)
|.++....++....++|..+...++.+
T Consensus 216 gSAI~~a~dP~~ma~af~~Av~aGr~a 242 (265)
T 1wv2_A 216 NTAIAHAKDPVMMAEAMKHAIVAGRLA 242 (265)
T ss_dssp SHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred ChHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 344445677888888888776655443
No 341
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=69.85 E-value=9.7 Score=37.88 Aligned_cols=34 Identities=21% Similarity=0.192 Sum_probs=29.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..++|.|+|-|.++..+++.++.+|+++++++..
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~ 178 (331)
T 1xdw_A 145 RNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVF 178 (331)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3579999999999999999999999998877443
No 342
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=69.83 E-value=4.7 Score=40.36 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=48.2
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|. |.++..+++.|+.+|.+++++..+++.......+ +|..+... +....+.+.+.....++|.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~------~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHR------EVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETT------STTHHHHHHHHHCTTCEEE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCC------CchHHHHHHHHcCCCCcEE
Confidence 34689999996 9999999999999999988886443322222222 34433221 1112344444443347899
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-..|
T Consensus 243 vi~~~G 248 (351)
T 1yb5_A 243 IIEMLA 248 (351)
T ss_dssp EEESCH
T ss_pred EEECCC
Confidence 986554
No 343
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=69.65 E-value=8.1 Score=36.94 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=28.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 61 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATT 61 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999994 789999999999999999988654
No 344
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=69.60 E-value=11 Score=35.98 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCART 65 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999 5889999999999999999888643
No 345
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=69.59 E-value=5 Score=40.58 Aligned_cols=33 Identities=12% Similarity=0.256 Sum_probs=29.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.++|+|+|.|.++..+++.++.+|.++++++.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 479999999999999999999999988887543
No 346
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=69.56 E-value=13 Score=36.33 Aligned_cols=33 Identities=27% Similarity=0.334 Sum_probs=29.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
..++|.|+|-|.++..+++.++.+|+++++++.
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr 155 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSR 155 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECC
Confidence 457999999999999999999999999877643
No 347
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=69.56 E-value=7.6 Score=38.02 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=29.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
-+||||+|.|.++..++..+.+.|+..+.+. |.|
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lv-D~D 69 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLF-DYD 69 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEE-CCC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEE-CCC
Confidence 4689999999999999999999999877665 444
No 348
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=69.42 E-value=5.3 Score=39.43 Aligned_cols=34 Identities=9% Similarity=0.165 Sum_probs=29.6
Q ss_pred CCCCCCEEEEEcCcHHHHHHHHHHHHcCC--cEEEE
Q 009316 67 VTCRQEKILVANRGEIAVRVIRTAHEMGI--PCVAV 100 (537)
Q Consensus 67 ~~~~~~~iLI~~~g~ia~~ii~aa~~~Gi--~~v~v 100 (537)
..+|++||.|+|.|.++..+++.+++.|+ +++++
T Consensus 29 ~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~ 64 (314)
T 3ggo_A 29 KSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGY 64 (314)
T ss_dssp CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred hhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEE
Confidence 34567899999999999999999999999 66665
No 349
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=69.35 E-value=7.4 Score=38.69 Aligned_cols=75 Identities=9% Similarity=0.050 Sum_probs=49.8
Q ss_pred CEEEEE-cCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 72 EKILVA-NRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~~iLI~-~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
++|||. |.|.++.-+++.|+.+|.+++++...++......++ +|..+... +....+.+.++....++|.|+-
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~------~~~~~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEK------APDFEATLREVMKAEQPRIFLD 239 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETT------STTHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECC------cHHHHHHHHHHhcCCCCcEEEE
Confidence 678876 689999999999999999998886544433222233 45555321 1123455666665678999997
Q ss_pred CCC
Q 009316 150 GYG 152 (537)
Q Consensus 150 g~g 152 (537)
..|
T Consensus 240 ~~g 242 (349)
T 3pi7_A 240 AVT 242 (349)
T ss_dssp SSC
T ss_pred CCC
Confidence 665
No 350
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=69.31 E-value=3.6 Score=40.72 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=51.3
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.| .|.++..+++.|+.+|.+++++..+.+......++ +|..+... +....+.+.++....++|.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~------~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINAS------KEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETT------TSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCC------CchHHHHHHHHhCCCCceE
Confidence 3468999999 79999999999999999998886544332222222 44444321 1122445555544557999
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
|+-..|.
T Consensus 221 vid~~g~ 227 (334)
T 3qwb_A 221 SFDSVGK 227 (334)
T ss_dssp EEECCGG
T ss_pred EEECCCh
Confidence 9976653
No 351
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=69.20 E-value=8.8 Score=41.46 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=27.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
-+||||+|.|.++..+++.+...|+..+.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLv 356 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFV 356 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 4789999999999999999999999877664
No 352
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=69.18 E-value=21 Score=35.61 Aligned_cols=32 Identities=9% Similarity=0.164 Sum_probs=24.7
Q ss_pred CCEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~~g~i-----a~~ii~aa~~~Gi~~v~v~~ 102 (537)
++|||++.-+.. ...+++++++.|++|.++..
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 458888864322 57899999999999998865
No 353
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=69.13 E-value=4.6 Score=39.44 Aligned_cols=32 Identities=9% Similarity=0.061 Sum_probs=29.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
.+.|+|+|.|..+..++..+++.|++|+++..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEEC
Confidence 46799999999999999999999999999954
No 354
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=68.95 E-value=4.8 Score=43.13 Aligned_cols=74 Identities=15% Similarity=0.027 Sum_probs=49.1
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
.+-++++|+|.|..+..+++.+++.|+++++++.+++........-+..+..| +..+.+.+.+ +.-.++++++
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~G------d~~~~~~L~~-a~i~~a~~vi 197 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYG------SPTDAHVLAG-LRVAAARSII 197 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEES------CTTCHHHHHH-TTGGGCSEEE
T ss_pred ccCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEe------CCCCHHHHHh-cCcccCCEEE
Confidence 34578999999999999999999999999999655442211111113344444 3445444444 4445688888
Q ss_pred e
Q 009316 149 P 149 (537)
Q Consensus 149 p 149 (537)
.
T Consensus 198 ~ 198 (565)
T 4gx0_A 198 A 198 (565)
T ss_dssp E
T ss_pred E
Confidence 6
No 355
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=68.95 E-value=7.3 Score=37.33 Aligned_cols=80 Identities=11% Similarity=0.024 Sum_probs=46.3
Q ss_pred CCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCch-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009316 66 KVTCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 66 ~~~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~ 141 (537)
|...+.|++||.|. +.|+..+++.+.+.|+++++++.+.+..... ..+.. ..+.+ +..|.+.+.+++++
T Consensus 23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~ 95 (272)
T 4dyv_A 23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPT-------DVTDPDSVRALFTA 95 (272)
T ss_dssp -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEEC-------CTTSHHHHHHHHHH
T ss_pred hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEe-------cCCCHHHHHHHHHH
Confidence 33334578999994 7899999999999999998886443211110 01111 22222 24455555555443
Q ss_pred c-----CCCEEEeCCC
Q 009316 142 R-----GCTMLHPGYG 152 (537)
Q Consensus 142 ~-----~~d~V~pg~g 152 (537)
. ++|.++-.-|
T Consensus 96 ~~~~~g~iD~lVnnAg 111 (272)
T 4dyv_A 96 TVEKFGRVDVLFNNAG 111 (272)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 2 7999886544
No 356
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=68.79 E-value=4.8 Score=39.84 Aligned_cols=91 Identities=14% Similarity=0.137 Sum_probs=55.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcC---CcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMG---IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~G---i~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
|+.||.|+|.|.++...++++++++ +++++|++. +.. ....++++. .+ ...|.+.+++++ ...+|+
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~-~a~~~a~~~-~~-----~~~~~~~~~ll~---~~~vD~ 69 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLS-RAKEFAQKH-DI-----PKAYGSYEELAK---DPNVEV 69 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHH-HHHHHHHHH-TC-----SCEESSHHHHHH---CTTCCE
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHH-HHHHHHHHc-CC-----CcccCCHHHHhc---CCCCCE
Confidence 4569999999999999999998875 467777632 211 112222211 01 023566666653 457999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcee
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
|+-..- ...+.+.+..+.+.|.+++
T Consensus 70 V~i~tp-~~~H~~~~~~al~~GkhVl 94 (334)
T 3ohs_X 70 AYVGTQ-HPQHKAAVMLCLAAGKAVL 94 (334)
T ss_dssp EEECCC-GGGHHHHHHHHHHTTCEEE
T ss_pred EEECCC-cHHHHHHHHHHHhcCCEEE
Confidence 886542 1234667777778887665
No 357
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=68.79 E-value=6.7 Score=36.99 Aligned_cols=32 Identities=9% Similarity=0.160 Sum_probs=27.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999 478999999999999999999865
No 358
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=68.61 E-value=10 Score=37.78 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=29.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..++|.|+|-|.++..+++.++.+|+++++++..
T Consensus 144 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~ 177 (333)
T 1dxy_A 144 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPY 177 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3578999999999999999999999998877543
No 359
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=68.56 E-value=14 Score=34.71 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=29.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||.|. |.++..+++.+.+.|++++++..+.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 38 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD 38 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 478999995 8899999999999999998885443
No 360
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=68.55 E-value=5.1 Score=37.11 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=30.6
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
.+.|+|||.|. |.++..+++.+.+.|++|+++..+.+
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 34578999996 99999999999999999999875443
No 361
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=68.50 E-value=5.8 Score=37.76 Aligned_cols=34 Identities=29% Similarity=0.309 Sum_probs=29.1
Q ss_pred CCEEEEEcC---cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~---g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 478999994 7899999999999999998886443
No 362
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=68.36 E-value=7.1 Score=36.69 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=28.6
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
..|++||.|. +.|+..+++.+.+.|+++++++.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r 38 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDI 38 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3578999995 78999999999999999988854
No 363
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=68.08 E-value=8.6 Score=36.02 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 37899999 4889999999999999999988643
No 364
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=67.92 E-value=12 Score=36.20 Aligned_cols=34 Identities=12% Similarity=0.039 Sum_probs=29.1
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..|++||.|. +.|+..+++.+.+.|++++++..+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3478999994 789999999999999999888644
No 365
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=67.72 E-value=6.8 Score=38.91 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=46.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHc-CC-cEEEEecCCCCCCc-hhhc--cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEM-GI-PCVAVYSTIDKDAL-HVKL--ADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~-Gi-~~v~v~~~~d~~~~-~~~~--ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~ 144 (537)
.|+|||.| .|.++..+++.+.+. |+ +++++..+.+.... ...+ ..-.+..+ +..|.+.+.++.+ ++
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~------Dl~d~~~l~~~~~--~~ 92 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIG------DVRDLERLNYALE--GV 92 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEEC------CTTCHHHHHHHTT--TC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEEC------CCCCHHHHHHHHh--cC
Confidence 47899999 599999999999999 98 77777543221100 0001 11112222 4567777777764 69
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|+|+-.-+
T Consensus 93 D~Vih~Aa 100 (344)
T 2gn4_A 93 DICIHAAA 100 (344)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 98875443
No 366
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=67.71 E-value=31 Score=32.55 Aligned_cols=143 Identities=11% Similarity=0.054 Sum_probs=76.9
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE-e
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH-P 149 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~-p 149 (537)
+|++++=+ |-=+.-.+.-|++.|++++++........ |. +.. ...+.+.+...|+..++.... .
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~------~s-~~~-------h~~~~e~a~~~A~~LGIpl~~v~ 70 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENE------ES-YMY-------HTINANLTDLQARALGIPLVKGF 70 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC----------------------CCSSSHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCC------Cc-ccc-------CCccHHHHHHHHHHcCCCEEEEE
Confidence 45665544 43333344456788999987743221110 10 100 012344566677878877643 2
Q ss_pred CCCc-ccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEee
Q 009316 150 GYGF-LAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (537)
Q Consensus 150 g~g~-lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp 228 (537)
..|. ..|...+.+++++.|+.-+ ..-.+..--.|.+....|.++|+...-. .--.+.+++.+..-..||-++|--
T Consensus 71 ~~g~~~~e~e~l~~~l~~~~i~~v--v~Gdi~s~yqr~r~e~vc~~~gl~~~~P--LW~~d~~~Ll~e~i~~G~~aiiv~ 146 (237)
T 3rjz_A 71 TQGEKEKEVEDLKRVLSGLKIQGI--VAGALASKYQRKRIEKVAKELGLEVYTP--AWGRDAKEYMRELLNLGFKIMVVG 146 (237)
T ss_dssp C------CHHHHHHHHTTSCCSEE--ECC---CCSHHHHHHHHHHHTTCEEECS--SSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCchHHHHHHHHHHHhcCCcEE--EECCcchHHHHHHHHHHHHHcCCEEEcc--ccCCCHHHHHHHHHHCCCEEEEEE
Confidence 2221 1123456666666666433 2234445556778888899999887554 334577777666667899876666
Q ss_pred cCCC
Q 009316 229 TAGG 232 (537)
Q Consensus 229 ~~g~ 232 (537)
++..
T Consensus 147 v~~~ 150 (237)
T 3rjz_A 147 VSAY 150 (237)
T ss_dssp EEST
T ss_pred EecC
Confidence 5443
No 367
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=67.68 E-value=17 Score=35.69 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
-..++|.|+|-|.++..+++.++.+|+++++++.
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~ 173 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDP 173 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECC
Confidence 3457999999999999999999999999887743
No 368
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=67.68 E-value=9.5 Score=35.48 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=28.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5889999999999999999988643
No 369
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=67.61 E-value=16 Score=35.77 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=28.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
+++||.|+|.|.++..+++.+.+.|++|++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~d 61 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWN 61 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEc
Confidence 46799999999999999999999999988774
No 370
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=67.53 E-value=3.9 Score=40.66 Aligned_cols=36 Identities=8% Similarity=-0.009 Sum_probs=28.6
Q ss_pred CCCCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 66 KVTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 66 ~~~~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
|+.+..+||.|+|.|.++..|+..+...|++|++++
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D 36 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEE
Confidence 344557899999999999999999999999999984
No 371
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=67.35 E-value=8 Score=37.56 Aligned_cols=33 Identities=6% Similarity=0.062 Sum_probs=28.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .+.|+..+++.+.+.|++|+++..+
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 59 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN 59 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 4789999999999999999988644
No 372
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=67.32 E-value=9.8 Score=38.10 Aligned_cols=137 Identities=9% Similarity=0.074 Sum_probs=77.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
.||.|+|.|.++...++++++. +++++++++ .+.. ....+.+ .....|.+.+++++ ...+|+|+-.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~--~~~~a~~-------~g~~~~~~~~~ll~---~~~~D~V~i~ 72 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFD-ILAE--KREAAAQ-------KGLKIYESYEAVLA---DEKVDAVLIA 72 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSHH--HHHHHHT-------TTCCBCSCHHHHHH---CTTCCEEEEC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEc-CCHH--HHHHHHh-------cCCceeCCHHHHhc---CCCCCEEEEc
Confidence 5899999999999999999988 788888763 2211 1122211 11134777776654 4579998865
Q ss_pred CCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCc-CCCCHHHHHHHHH--hcCC
Q 009316 151 YGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSDG-LLQSTEEAVKLAD--ELGF 222 (537)
Q Consensus 151 ~g~lsE~~~~a~~~e~~Gl~~iG-----p~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~-~v~~~~~~~~~~~--~ig~ 222 (537)
... ..+.+.+..+.+.|..++. .+.+..+ .+.+++++.|+..--++.. .......+.+..+ .+|-
T Consensus 73 tp~-~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~------~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 145 (359)
T 3e18_A 73 TPN-DSHKELAISALEAGKHVVCEKPVTMTSEDLL------AIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGE 145 (359)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEEEESSCCSSHHHHH------HHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTTSS
T ss_pred CCc-HHHHHHHHHHHHCCCCEEeeCCCcCCHHHHH------HHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCCCC
Confidence 422 2345677777778876542 2222222 2344566677665333211 1112334444443 3566
Q ss_pred cEEEee
Q 009316 223 PVMIKA 228 (537)
Q Consensus 223 PvvvKp 228 (537)
+..+..
T Consensus 146 i~~~~~ 151 (359)
T 3e18_A 146 MFHLES 151 (359)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 665554
No 373
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=67.31 E-value=14 Score=36.63 Aligned_cols=141 Identities=13% Similarity=0.072 Sum_probs=77.9
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 72 EKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~~iLI~~~g~ia~~-ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
.||.|+|.|.++.. .++++++. ++++++|++ .+.. ... +. + +....|.+.+++++ ...+|+|+-
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d-~~~~--~~~-~~--~-----~~~~~~~~~~~ll~---~~~vD~V~i 73 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSS-SDAS--KVH-AD--W-----PAIPVVSDPQMLFN---DPSIDLIVI 73 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC-SCHH--HHH-TT--C-----SSCCEESCHHHHHH---CSSCCEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEEC-CCHH--HHH-hh--C-----CCCceECCHHHHhc---CCCCCEEEE
Confidence 58999999999987 78888887 788888763 2211 111 11 0 12234677777653 457999886
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCcC-CCCHHHHHHHHH--hcCCcEEE
Q 009316 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGL-LQSTEEAVKLAD--ELGFPVMI 226 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~~-v~~~~~~~~~~~--~ig~Pvvv 226 (537)
... ...+.+.+..+.+.|.+++.-.|-+.. ..+=..+.+++++.|+..--++... ......+.+..+ .+|-+..+
T Consensus 74 ~tp-~~~H~~~~~~al~aGkhV~~EKPla~~-~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~ 151 (352)
T 3kux_A 74 PTP-NDTHFPLAQSALAAGKHVVVDKPFTVT-LSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVYF 151 (352)
T ss_dssp CSC-TTTHHHHHHHHHHTTCEEEECSSCCSC-HHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEEEE
T ss_pred eCC-hHHHHHHHHHHHHCCCcEEEECCCcCC-HHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhcCCCCceEEE
Confidence 542 123467777788888876532221110 0111234456677777653332111 112334444443 45656555
Q ss_pred ee
Q 009316 227 KA 228 (537)
Q Consensus 227 Kp 228 (537)
..
T Consensus 152 ~~ 153 (352)
T 3kux_A 152 ES 153 (352)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 374
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=67.30 E-value=14 Score=35.04 Aligned_cols=33 Identities=12% Similarity=-0.023 Sum_probs=28.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 47899999 5789999999999999999888643
No 375
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=67.29 E-value=30 Score=32.76 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=30.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.+.+
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 41 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAV 41 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCS
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccch
Confidence 47899999 477999999999999999998876544
No 376
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=67.25 E-value=22 Score=37.35 Aligned_cols=35 Identities=9% Similarity=0.132 Sum_probs=30.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
+++|||.| .|.++..+++.+.+.|++|+++.....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~ 182 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP 182 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 56899999 599999999999999999999875543
No 377
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=67.17 E-value=10 Score=38.12 Aligned_cols=78 Identities=17% Similarity=0.067 Sum_probs=47.6
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCH-HHHHHHHHHcCCC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLI-PNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~-~~i~~~a~~~~~d 145 (537)
...++|||.|.|.++.-+++.|+.+|. +++++...++......++ +|..+... +...+. +.+.++.. .++|
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~~~~~~~~~~~~~~-~g~D 264 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN-----DHSEPISQVLSKMTN-GGVD 264 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG-----GCSSCHHHHHHHHHT-SCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEecc-----ccchhHHHHHHHHhC-CCCC
Confidence 345799999999999999999999999 577774433332222222 45444211 101223 33434333 3799
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+-..|
T Consensus 265 ~vid~~g 271 (374)
T 1cdo_A 265 FSLECVG 271 (374)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9996655
No 378
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=67.01 E-value=9.9 Score=36.58 Aligned_cols=33 Identities=9% Similarity=0.208 Sum_probs=28.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 4889999999999999999988644
No 379
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=67.00 E-value=15 Score=37.06 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=24.9
Q ss_pred CCEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~g~i-----a~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
++|||++..+.. ...+++++++.|++|.++.+..
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~ 45 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPV 45 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGG
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHH
Confidence 468888764322 4789999999999999886543
No 380
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=66.99 E-value=6.5 Score=35.61 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=28.9
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 72 EKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 72 ~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
+||||.| .|.++..+++.+.+.|++++++..+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4799999 49999999999999999999986543
No 381
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=66.99 E-value=18 Score=35.43 Aligned_cols=35 Identities=14% Similarity=-0.033 Sum_probs=30.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcC-CcEEEEecCC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMG-IPCVAVYSTI 104 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~G-i~~v~v~~~~ 104 (537)
|++||.|+|.|.++..+++.+.+.| ++|++++.++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5689999999999999999999999 8888775443
No 382
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=66.76 E-value=14 Score=36.89 Aligned_cols=32 Identities=9% Similarity=0.061 Sum_probs=28.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
+++|||.| .|-++..+++.+.+.|++|++++.
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence 67899999 599999999999999999999853
No 383
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=66.75 E-value=7.6 Score=37.62 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=28.5
Q ss_pred CCCEEEEEcC-cH--HHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANR-GE--IAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~-g~--ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..|++||.|. |. |+..+++.+.+.|.++++++.+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 3578999996 44 9999999999999999888644
No 384
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=66.74 E-value=22 Score=33.38 Aligned_cols=78 Identities=12% Similarity=0.068 Sum_probs=53.3
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
+|-+|+|. |..+..+++.+...|++++......+. ....-+|-.+.+. ........+++|.+.++..|+-+
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~~--~~l~~~DVvIDFT------~P~a~~~~~~~~~~~g~~~ViGT 84 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--EELDSPDVVIDFS------SPEALPKTVDLCKKYRAGLVLGT 84 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--EECSCCSEEEECS------CGGGHHHHHHHHHHHTCEEEECC
T ss_pred ceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCCc--ccccCCCEEEECC------CHHHHHHHHHHHHHcCCCEEEeC
Confidence 57888885 999999999888889998876432221 1112456555432 22345577788889999999988
Q ss_pred CCccccc
Q 009316 151 YGFLAEN 157 (537)
Q Consensus 151 ~g~lsE~ 157 (537)
.||..|.
T Consensus 85 TG~~~~~ 91 (228)
T 1vm6_A 85 TALKEEH 91 (228)
T ss_dssp CSCCHHH
T ss_pred CCCCHHH
Confidence 8886554
No 385
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=66.68 E-value=4.5 Score=39.37 Aligned_cols=34 Identities=12% Similarity=0.027 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
.+.++|+|+|.|..++..+..+++.|++++++..
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence 3468999999999999999999999999999954
No 386
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=66.62 E-value=27 Score=33.85 Aligned_cols=72 Identities=13% Similarity=0.018 Sum_probs=45.6
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHc---C---CcEEEEecCCCCCC-chh-hc---cC-EEEEcCCCCCCCCCCCHHHHHHH
Q 009316 72 EKILVAN-RGEIAVRVIRTAHEM---G---IPCVAVYSTIDKDA-LHV-KL---AD-ESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 72 ~~iLI~~-~g~ia~~ii~aa~~~---G---i~~v~v~~~~d~~~-~~~-~~---ad-~~~~i~~~~~~~sy~~~~~i~~~ 138 (537)
+||||.| .|.++..+++.+.+. | ++++++........ ... .+ .. +.+.. +..+.+.+.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 73 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG-------DIRDAGLLARE 73 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEEC-------CTTCHHHHHHH
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEc-------CCCCHHHHHHH
Confidence 3799999 599999999999996 8 89988864332111 111 11 11 12222 45667777766
Q ss_pred HHHcCCCEEEeCCC
Q 009316 139 AISRGCTMLHPGYG 152 (537)
Q Consensus 139 a~~~~~d~V~pg~g 152 (537)
+ .++|+|+-.-+
T Consensus 74 ~--~~~d~Vih~A~ 85 (337)
T 1r6d_A 74 L--RGVDAIVHFAA 85 (337)
T ss_dssp T--TTCCEEEECCS
T ss_pred h--cCCCEEEECCC
Confidence 6 57998875443
No 387
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=66.60 E-value=5.4 Score=39.64 Aligned_cols=78 Identities=23% Similarity=0.204 Sum_probs=50.1
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|. |.++..+++.|+.+|.+++++..+.+......++ +|..+.. +....+.+.++....++|.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~-------~~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPL-------EEGWAKAVREATGGAGVDM 230 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEES-------STTHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecC-------chhHHHHHHHHhCCCCceE
Confidence 34689999997 9999999999999999998887655433333333 4444421 1112334444443447999
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
|+-..|.
T Consensus 231 vid~~g~ 237 (342)
T 4eye_A 231 VVDPIGG 237 (342)
T ss_dssp EEESCC-
T ss_pred EEECCch
Confidence 9976653
No 388
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=66.57 E-value=9.8 Score=36.04 Aligned_cols=34 Identities=9% Similarity=0.109 Sum_probs=29.1
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..|++||.| .+.|+..+++.+.+.|+++++++.+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 4789999999999999999988644
No 389
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=66.56 E-value=23 Score=33.29 Aligned_cols=70 Identities=13% Similarity=0.056 Sum_probs=44.2
Q ss_pred CCEEEEEcC-----------------cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHH
Q 009316 71 QEKILVANR-----------------GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 71 ~~~iLI~~~-----------------g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~ 133 (537)
.|+|||.++ |.++..+++++.+.|.+|++++............. ..+ +....+
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~-~~~---------~v~s~~ 72 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNL-SIR---------EITNTK 72 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTE-EEE---------ECCSHH
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCe-EEE---------EHhHHH
Confidence 367888877 47999999999999999999986543221100011 112 234566
Q ss_pred HHHHHHHH--cCCCEEEeC
Q 009316 134 NVLSAAIS--RGCTMLHPG 150 (537)
Q Consensus 134 ~i~~~a~~--~~~d~V~pg 150 (537)
++.+.+.+ .++|.++-.
T Consensus 73 em~~~v~~~~~~~Dili~a 91 (232)
T 2gk4_A 73 DLLIEMQERVQDYQVLIHS 91 (232)
T ss_dssp HHHHHHHHHGGGCSEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEc
Confidence 66666543 358887743
No 390
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=66.47 E-value=6 Score=37.78 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=29.9
Q ss_pred CCCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 68 TCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 68 ~~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
....|++||.| .+.|+..+++.+.+.|+++++++.+
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 33457899999 4789999999999999999888643
No 391
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=66.40 E-value=10 Score=38.04 Aligned_cols=78 Identities=13% Similarity=0.000 Sum_probs=48.1
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCC-HHHHHHHHHHcCCC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLL-IPNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~-~~~i~~~a~~~~~d 145 (537)
...++|||.|.|.++.-+++.|+.+|. +++++...++......++ +|..+... +...+ .+.+.++.. .++|
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-----~~~~~~~~~v~~~~~-~g~D 267 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR-----ELDKPVQDVITELTA-GGVD 267 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG-----GCSSCHHHHHHHHHT-SCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccc-----cccchHHHHHHHHhC-CCcc
Confidence 345799999999999999999999999 577775444332222233 45444211 00012 334444433 3899
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+-..|
T Consensus 268 vvid~~G 274 (376)
T 1e3i_A 268 YSLDCAG 274 (376)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9996655
No 392
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=66.37 E-value=17 Score=34.54 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=28.7
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..|++||.|. +.|+..+++.+.+.|+++++++.+
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~ 61 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA 61 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999994 779999999999999998887543
No 393
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=66.36 E-value=6.2 Score=39.78 Aligned_cols=73 Identities=22% Similarity=0.173 Sum_probs=48.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
..++|||.|.|.++.-+++.|+.+|.+++++...++......++ +|..+. |.+.+.+.++. .++|.|+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~---------~~~~~~~~~~~--~g~Dvvi 262 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVN---------SRNADEMAAHL--KSFDFIL 262 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEE---------TTCHHHHHTTT--TCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEec---------cccHHHHHHhh--cCCCEEE
Confidence 45799999999999999999999999988876444432222222 455443 33333332222 5789998
Q ss_pred eCCCc
Q 009316 149 PGYGF 153 (537)
Q Consensus 149 pg~g~ 153 (537)
-..|.
T Consensus 263 d~~g~ 267 (369)
T 1uuf_A 263 NTVAA 267 (369)
T ss_dssp ECCSS
T ss_pred ECCCC
Confidence 76653
No 394
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=66.25 E-value=5.1 Score=37.16 Aligned_cols=32 Identities=13% Similarity=0.195 Sum_probs=28.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
+|+||.|+|.|.++..+++.+.+.|+++++++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIAN 53 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEE
Confidence 35789999999999999999999999988844
No 395
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=66.23 E-value=3.5 Score=41.08 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=47.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|. +++++..+++......++ +|..+.. . +....+.+.++....++|.|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~----~--~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINP----F--EEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECT----T--TSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC----C--CcCHHHHHHHHcCCCCCCEE
Confidence 45789999999999999999999999 888885433322222222 3444321 1 11113344444333478999
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-..|
T Consensus 241 id~~g 245 (348)
T 2d8a_A 241 LEFSG 245 (348)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 86655
No 396
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=66.18 E-value=9.9 Score=36.38 Aligned_cols=33 Identities=18% Similarity=0.135 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 4789999999999999999988643
No 397
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=65.96 E-value=20 Score=36.06 Aligned_cols=98 Identities=16% Similarity=0.250 Sum_probs=58.9
Q ss_pred CEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009316 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg~ 151 (537)
+.|+.++.|..+..++.+|+++|++++++.+... + ..-++.++..|++.+..+.
T Consensus 94 ~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~--~------------------------~~k~~~~~~~GA~Vv~v~~ 147 (364)
T 4h27_A 94 AHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTT--P------------------------ALTIERLKNEGATVKVVGE 147 (364)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCCEEEEEETTS--C------------------------HHHHHHHHTTTCEEEEECS
T ss_pred CEEEEeCCChHHHHHHHHHHHhCCceEEEECCCC--C------------------------HHHHHHHHHcCCEEEEECC
Confidence 5688888899999999999999999998853221 0 1234455667777666543
Q ss_pred CcccccHHH-HHHHHHC-CCceeCCCHHHHHHhcCHHHHHHHHHHcC
Q 009316 152 GFLAENAVF-VEMCREH-GINFIGPNPDSIRIMGDKSTARETMKNAG 196 (537)
Q Consensus 152 g~lsE~~~~-a~~~e~~-Gl~~iGp~~~~i~~~~dK~~~r~~l~~~G 196 (537)
++ .+.... .+++++. |..++.|-.......+.+....+++++.+
T Consensus 148 ~~-~~a~~~a~~l~~~~~~~~~~~~~~np~~~~G~~t~~~Ei~~q~~ 193 (364)
T 4h27_A 148 LL-DEAFELAKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKETLW 193 (364)
T ss_dssp ST-THHHHHHHHHHHHSTTEEEECSSCSHHHHHHHTHHHHHHHHHCS
T ss_pred CH-HHHHHHHHHHHHhCCCeEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 22 122222 3344554 66666553333344444566667776653
No 398
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=65.95 E-value=4.3 Score=40.28 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=28.3
Q ss_pred CCCCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 67 ~~~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
+.+.++||.|+|.|.++..++..+.+.|++|++++
T Consensus 2 ~~~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d 36 (319)
T 2dpo_A 2 ASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEe
Confidence 34457899999999999999999999999988874
No 399
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=65.93 E-value=14 Score=36.81 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=28.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
..++|.|+|-|.++..+++.++.+|+++++++
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d 176 (333)
T 1j4a_A 145 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYD 176 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEC
Confidence 35799999999999999999999999988774
No 400
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=65.92 E-value=4.6 Score=39.73 Aligned_cols=77 Identities=14% Similarity=0.150 Sum_probs=48.6
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.| .|.++..+++.++.+|.+++++..+.+.......+ ++..+... +....+.+.+.....++|.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYR------EEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECC------CccHHHHHHHHhCCCCceEE
Confidence 468999999 69999999999999999988886543322211222 34433221 11223445444444578999
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-..|
T Consensus 214 i~~~g 218 (327)
T 1qor_A 214 YDSVG 218 (327)
T ss_dssp EECSC
T ss_pred EECCc
Confidence 97766
No 401
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=65.85 E-value=6.7 Score=38.89 Aligned_cols=77 Identities=19% Similarity=0.120 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
..-++|||.|.|.++.-.++.|+.+ |.+++++...++......++ +|..+.-. ....+.+.++....++|.
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~-------~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG-------AGAADAIRELTGGQGATA 242 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECS-------TTHHHHHHHHHGGGCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCC-------CcHHHHHHHHhCCCCCeE
Confidence 3468999999999999999999999 78888886554433333333 45544311 123556666665568999
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-..|
T Consensus 243 v~d~~G 248 (345)
T 3jv7_A 243 VFDFVG 248 (345)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 996655
No 402
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=65.83 E-value=10 Score=36.33 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=27.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEe
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
.|++||.|. +.|+..+++.+.+.|.++++++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 60 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITG 60 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEe
Confidence 478999994 7899999999999999999886
No 403
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=65.70 E-value=6.7 Score=37.89 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=28.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
++||.|+|.|.++..++..+.+.|++|++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 6899999999999999999999999988873
No 404
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=65.69 E-value=6.1 Score=39.13 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=28.1
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcC-CcEEEEecCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~G-i~~v~v~~~~ 104 (537)
.++|||.|. |.++..+++.+.+.| ++|+++....
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 468999996 999999999999999 8998886443
No 405
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=65.68 E-value=15 Score=34.53 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=29.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.+.+
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 42 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGE 42 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999 477999999999999999999865443
No 406
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=65.64 E-value=11 Score=37.88 Aligned_cols=78 Identities=19% Similarity=0.111 Sum_probs=47.2
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCH-HHHHHHHHHcCCC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLI-PNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~-~~i~~~a~~~~~d 145 (537)
...++|||.|.|.++.-+++.|+.+|. +++++...++......++ +|..+... +...+. +.+.++.. .++|
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~~~~~~~~~~~~~~-~g~D 263 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ-----DYKKPIQEVLTEMSN-GGVD 263 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG-----GCSSCHHHHHHHHTT-SCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEeccc-----ccchhHHHHHHHHhC-CCCc
Confidence 345799999999999999999999999 577774433332222222 45444211 001223 33333332 3799
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+-..|
T Consensus 264 ~vid~~g 270 (374)
T 2jhf_A 264 FSFEVIG 270 (374)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9996655
No 407
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=65.61 E-value=12 Score=34.93 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=28.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.++..+++.+.+.|++++++..+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 578999994 789999999999999999988643
No 408
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=65.57 E-value=8.9 Score=38.01 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=54.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+.||.|+|.|.++...++++++. +++++++++ .+... ...++++. + ...|.+.++++ ....+|+|+-
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~~-~~~~a~~~---g----~~~~~~~~~~l---~~~~~D~V~i 71 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIAD-PFIEG-AQRLAEAN---G----AEAVASPDEVF---ARDDIDGIVI 71 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-SSHHH-HHHHHHTT---T----CEEESSHHHHT---TCSCCCEEEE
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEEC-CCHHH-HHHHHHHc---C----CceeCCHHHHh---cCCCCCEEEE
Confidence 46899999999999999999987 788887753 22111 11122110 0 11255666554 3457899886
Q ss_pred CCCcccccHHHHHHHHHCCCcee
Q 009316 150 GYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
... ...+.+.+..+.+.|..++
T Consensus 72 ~tp-~~~h~~~~~~al~~gk~v~ 93 (344)
T 3euw_A 72 GSP-TSTHVDLITRAVERGIPAL 93 (344)
T ss_dssp CSC-GGGHHHHHHHHHHTTCCEE
T ss_pred eCC-chhhHHHHHHHHHcCCcEE
Confidence 542 1234566667777787655
No 409
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=65.47 E-value=9.5 Score=36.57 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=28.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.+++||.|. |.++..+++.+.+.|++++++..+
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999995 889999999999999999988644
No 410
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=65.47 E-value=8.2 Score=35.82 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=28.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5889999999999999999988643
No 411
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=65.41 E-value=12 Score=35.51 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=28.3
Q ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEec
Q 009316 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 68 ~~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
..|.|++||.|. +.++..+++.+.+.|++++++..
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~ 58 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYH 58 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 345678999994 78999999999999999977653
No 412
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=65.35 E-value=5.6 Score=39.96 Aligned_cols=77 Identities=13% Similarity=0.126 Sum_probs=47.7
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCc-EEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIP-CVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~-~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.|.++..+++.|+.+|.. ++++..+++......++ +|..+... +....+.+.++... ++|.
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~------~~~~~~~~~~~~~g-g~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK------TQDPVAAIKEITDG-GVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTS-CEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCC------ccCHHHHHHHhcCC-CCcE
Confidence 3457999999999999999999999995 77775443332222222 45555321 11113444444333 7899
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
|+-..|
T Consensus 262 vid~~g 267 (371)
T 1f8f_A 262 ALESTG 267 (371)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 986554
No 413
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=65.35 E-value=14 Score=36.70 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=29.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
..++|.|+|-|.++..+++.++.+|+++++++.
T Consensus 145 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~ 177 (333)
T 2d0i_A 145 YGKKVGILGMGAIGKAIARRLIPFGVKLYYWSR 177 (333)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEECC
Confidence 357899999999999999999999999877743
No 414
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=65.29 E-value=9.3 Score=37.54 Aligned_cols=34 Identities=9% Similarity=0.134 Sum_probs=29.1
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||.|. |.|+..+++.+.+.|++|+++..+.
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~ 42 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ 42 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCH
Confidence 478999994 7899999999999999998886443
No 415
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=65.26 E-value=5 Score=39.61 Aligned_cols=79 Identities=15% Similarity=0.181 Sum_probs=50.2
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|. |.++..+++.++.+|.+++++..+.+.......+ +|..+... +....+.+.+.....++|.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~------~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYS------TQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECC------CHHHHHHHHHHhCCCCCeE
Confidence 34588999995 9999999999999999988886544322211222 34433221 1122445555554457999
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
++-..|.
T Consensus 218 vi~~~g~ 224 (333)
T 1wly_A 218 VYDSIGK 224 (333)
T ss_dssp EEECSCT
T ss_pred EEECCcH
Confidence 9977664
No 416
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=65.24 E-value=3.6 Score=40.92 Aligned_cols=148 Identities=13% Similarity=0.027 Sum_probs=80.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCC-CCCc-hhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID-KDAL-HVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d-~~~~-~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
|+.||.|+|.|.++...++++ ..++++++|.+... .... ....+.+ + + .....|.+.+++++ ...+|+|
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~-~--~--~~~~~~~~~~~ll~---~~~vD~V 71 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISE-M--N--IKPKKYNNWWEMLE---KEKPDIL 71 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHT-T--T--CCCEECSSHHHHHH---HHCCSEE
T ss_pred CceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHH-c--C--CCCcccCCHHHHhc---CCCCCEE
Confidence 457999999988888888887 77889998874322 1221 1111111 0 0 01124778777765 3579998
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCC--CCCCCC-cCCCCHHHHHHHHH--hcCC
Q 009316 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP--TVPGSD-GLLQSTEEAVKLAD--ELGF 222 (537)
Q Consensus 148 ~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvp--vp~~~~-~~v~~~~~~~~~~~--~ig~ 222 (537)
+-..- ...+.+.+..+.+.|..++.-.|-+.. ..+=..+.+++++.|+. .-.++. ........+.+..+ .+|-
T Consensus 72 ~I~tp-~~~H~~~~~~al~aGkhVl~EKPla~~-~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~ 149 (337)
T 3ip3_A 72 VINTV-FSLNGKILLEALERKIHAFVEKPIATT-FEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVSEGAVGE 149 (337)
T ss_dssp EECSS-HHHHHHHHHHHHHTTCEEEECSSSCSS-HHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHHHHTTTSS
T ss_pred EEeCC-cchHHHHHHHHHHCCCcEEEeCCCCCC-HHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHHhcCCccc
Confidence 86532 123456777788889877643322221 11122345566777776 222211 11122344555554 5666
Q ss_pred cEEEee
Q 009316 223 PVMIKA 228 (537)
Q Consensus 223 PvvvKp 228 (537)
+..+..
T Consensus 150 i~~i~~ 155 (337)
T 3ip3_A 150 IRLVNT 155 (337)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 666654
No 417
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=65.21 E-value=6.9 Score=37.53 Aligned_cols=77 Identities=10% Similarity=0.013 Sum_probs=47.7
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchh-hcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHc-----
Q 009316 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLA--DESVCIGEAPSSQSYLLIPNVLSAAISR----- 142 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~-~~a--d~~~~i~~~~~~~sy~~~~~i~~~a~~~----- 142 (537)
|++||.|. +.|+..+++.+.+.|++++++..+.+...... .+. .....+. -+..|.+.+.+++++.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~Dv~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLT-----LDVRDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEE-----CCTTCHHHHHHHHHTCCGGGS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEE-----cCCCCHHHHHHHHHHHHHHhC
Confidence 78999994 67999999999999999998864432111000 010 1122111 1356677777776653
Q ss_pred CCCEEEeCCCc
Q 009316 143 GCTMLHPGYGF 153 (537)
Q Consensus 143 ~~d~V~pg~g~ 153 (537)
++|.++-.-|.
T Consensus 97 ~iD~lvnnAG~ 107 (272)
T 2nwq_A 97 TLRGLINNAGL 107 (272)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57888765443
No 418
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=65.20 E-value=4.1 Score=39.53 Aligned_cols=33 Identities=9% Similarity=-0.039 Sum_probs=29.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
+++|+|+|.|..+...+..+++.|++++++...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 468999999999999999999999999999543
No 419
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=65.12 E-value=13 Score=34.61 Aligned_cols=30 Identities=3% Similarity=0.213 Sum_probs=21.7
Q ss_pred CEEEEEcCcHHHHHHHHH--HHHcCCcEEEEe
Q 009316 72 EKILVANRGEIAVRVIRT--AHEMGIPCVAVY 101 (537)
Q Consensus 72 ~~iLI~~~g~ia~~ii~a--a~~~Gi~~v~v~ 101 (537)
++|+|+|.|..+..+++. ....|++++++.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~ 117 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAF 117 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEE
Confidence 579999999999999994 556799999876
No 420
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=65.04 E-value=18 Score=33.40 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=27.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEe
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
.|++||.| .|.++..+++.+.+.|+++++++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 47899999 48899999999999999998884
No 421
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=64.95 E-value=10 Score=38.28 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=28.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEE
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAV 100 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v 100 (537)
.-|+|+|.|.|.++..+++.+.++|.++++.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~ 202 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVT 202 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEE
Confidence 3589999999999999999999999998854
No 422
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=64.94 E-value=6.5 Score=36.36 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=28.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
+|++||.|. +.++..+++.+.+.|++++++..+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999995 779999999999999998888644
No 423
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=64.81 E-value=24 Score=35.20 Aligned_cols=116 Identities=4% Similarity=0.001 Sum_probs=63.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCC---CchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE-
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD---ALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM- 146 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~---~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~- 146 (537)
-.+|||+|.|..+..+++.+-..|+..+.+. |.|.- ....++--..-.+| -...+.+.+.+++.+.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlv-D~d~V~~sNL~rq~~~~~~diG-------~~Ka~~~~~~l~~lnp~v~ 107 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTML-DHEQVTPEDPGAQFLIRTGSVG-------RNRAEASLERAQNLNPMVD 107 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEE-CCCBCCSSCGGGCTTSCSSCTT-------SBHHHHHHHHHHHTCTTSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEE-ECCCcchhhCCCCCccccccCc-------CCHHHHHHHHHHhHCCCeE
Confidence 3789999999999999999999999766554 33321 12222110000122 224566667777766553
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 009316 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVP 201 (537)
Q Consensus 147 V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~ 201 (537)
|.+-.+.+.++ ..+.+...-+.+.+.... ..+....+.+.++++|..-
T Consensus 108 v~~~~~~~~~~--~~~~~~~~dvVv~~~d~~-----~~r~~ln~~~~~~~ip~i~ 155 (346)
T 1y8q_A 108 VKVDTEDIEKK--PESFFTQFDAVCLTCCSR-----DVIVKVDQICHKNSIKFFT 155 (346)
T ss_dssp EEEECSCGGGC--CHHHHTTCSEEEEESCCH-----HHHHHHHHHHHHTTCEEEE
T ss_pred EEEEecccCcc--hHHHhcCCCEEEEcCCCH-----HHHHHHHHHHHHcCCCEEE
Confidence 22222233232 123344444444433222 2244566678888888764
No 424
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=64.79 E-value=11 Score=35.70 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=28.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 478999995 679999999999999999988643
No 425
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=64.71 E-value=15 Score=34.50 Aligned_cols=78 Identities=12% Similarity=0.082 Sum_probs=46.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCch-hhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-----C
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----G 143 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~-~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-----~ 143 (537)
.|++||.|. +.++..+++.+.+.|++++++..+.+..... ..+......+. -+..+.+.+.+++++. +
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVA-----ADISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEE-----CCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEE-----ecCCCHHHHHHHHHHHHHhcCC
Confidence 478999994 7799999999999999999886443211110 11111122111 1244555555444432 7
Q ss_pred CCEEEeCCCc
Q 009316 144 CTMLHPGYGF 153 (537)
Q Consensus 144 ~d~V~pg~g~ 153 (537)
+|.++-.-|.
T Consensus 84 id~li~~Ag~ 93 (261)
T 3n74_A 84 VDILVNNAGI 93 (261)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8988866543
No 426
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=64.70 E-value=17 Score=34.19 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cH--HHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GE--IAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~--ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. |. ++..+++.+.+.|+++++++.+
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 478999995 44 9999999999999999988644
No 427
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=64.67 E-value=6.7 Score=40.30 Aligned_cols=94 Identities=13% Similarity=0.018 Sum_probs=56.6
Q ss_pred CEEEEEcCcH---HHHHHHHHHHHcC-CcEEE-EecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH--cCC
Q 009316 72 EKILVANRGE---IAVRVIRTAHEMG-IPCVA-VYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS--RGC 144 (537)
Q Consensus 72 ~~iLI~~~g~---ia~~ii~aa~~~G-i~~v~-v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~--~~~ 144 (537)
-||.|+|.|. ++...+.+++..+ +++++ +. +.+.. ....++.+. -+ +....|.+.+++++--+. ..+
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~-d~~~~-~a~~~a~~~-g~---~~~~~~~~~~~ll~~~~~~~~~v 111 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGAL-SSTPE-KAEASGREL-GL---DPSRVYSDFKEMAIREAKLKNGI 111 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEEC-CSSHH-HHHHHHHHH-TC---CGGGBCSCHHHHHHHHHHCTTCC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEe-CCCHH-HHHHHHHHc-CC---CcccccCCHHHHHhcccccCCCC
Confidence 4899999998 8888788888776 67775 53 22211 112222221 11 111357888888765332 469
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 145 TMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 145 d~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
|+|+-..-. ..+.+.+..+.+.|..++
T Consensus 112 D~V~I~tp~-~~H~~~~~~al~aGkhVl 138 (417)
T 3v5n_A 112 EAVAIVTPN-HVHYAAAKEFLKRGIHVI 138 (417)
T ss_dssp SEEEECSCT-TSHHHHHHHHHTTTCEEE
T ss_pred cEEEECCCc-HHHHHHHHHHHhCCCeEE
Confidence 998865321 234677777888888765
No 428
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=64.63 E-value=15 Score=34.18 Aligned_cols=75 Identities=11% Similarity=-0.015 Sum_probs=45.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhh-ccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~ad~~~~i~~~~~~~sy~~~~~i~~~a~~-----~~ 143 (537)
.|++||.| .+.++..+++.+.+.|++++++..+.+....... +.-..+.+ +..|.+.+.++.++ .+
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVM-------DVADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEEC-------CTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEe-------cCCCHHHHHHHHHHHHHHcCC
Confidence 47899999 4789999999999999999988643321110000 01123332 24455555544433 26
Q ss_pred CCEEEeCCC
Q 009316 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~pg~g 152 (537)
+|.++-.-|
T Consensus 78 id~lvn~Ag 86 (245)
T 1uls_A 78 LDGVVHYAG 86 (245)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898886554
No 429
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=64.55 E-value=29 Score=33.37 Aligned_cols=33 Identities=9% Similarity=0.001 Sum_probs=29.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.|+..+++.+.+.|.++++++..
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 578999994 779999999999999999998654
No 430
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=64.54 E-value=17 Score=34.63 Aligned_cols=80 Identities=9% Similarity=-0.029 Sum_probs=48.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc----cCEEEEcCCCCCCCCCCCHHHHHHHHHH-cCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL----ADESVCIGEAPSSQSYLLIPNVLSAAIS-RGC 144 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~----ad~~~~i~~~~~~~sy~~~~~i~~~a~~-~~~ 144 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.+........ ......+. ....+..+++.+++.+.+ .++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELA--GDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEE--CCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEE--ecCCCHHHHHHHHHHHHHhCCC
Confidence 478999994 7899999999999999999987655433211111 11122121 112233445555554443 378
Q ss_pred CEEEeCCC
Q 009316 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~pg~g 152 (537)
|.++-.-|
T Consensus 111 D~lvnnAg 118 (275)
T 4imr_A 111 DILVINAS 118 (275)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98886544
No 431
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=64.51 E-value=10 Score=37.18 Aligned_cols=38 Identities=13% Similarity=0.009 Sum_probs=30.8
Q ss_pred CCCCCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
|.....|++||.| .+.|+..+++.+.+.|.++++++.+
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 4344457899999 4789999999999999999988543
No 432
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=64.47 E-value=16 Score=34.30 Aligned_cols=33 Identities=12% Similarity=0.175 Sum_probs=28.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.++..+++.+.+.|+++++++.+
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999995 889999999999999999988644
No 433
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=64.38 E-value=14 Score=37.24 Aligned_cols=97 Identities=11% Similarity=-0.033 Sum_probs=52.8
Q ss_pred CCEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEecCCCCCCchhh-ccCEEEEcCCCCCCCC----------------
Q 009316 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LADESVCIGEAPSSQS---------------- 128 (537)
Q Consensus 71 ~~~iLI~~~g~i-----a~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~-~ad~~~~i~~~~~~~s---------------- 128 (537)
|+|||++.-+.. ...+++++++.|++|.++.+... ..... .--..+.++.......
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~--~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGF--AEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHL 97 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGG--HHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHH--HHHHHhcCCEEEeccccccccccchhhccccHHHHHHH
Confidence 568888875433 47899999999999998863221 11111 1123444432111000
Q ss_pred -C-----CCHHHHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 129 -Y-----LLIPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 129 -y-----~~~~~i~~~a~~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
+ ...+.+.+++++.++|+|+... +..- ....+++..|++++
T Consensus 98 ~~~~~~~~~~~~l~~~l~~~~PDlVi~d~-~~~~--~~~~aA~~~giP~v 144 (415)
T 3rsc_A 98 MYLRENVSVLRATAEALDGDVPDLVLYDD-FPFI--AGQLLAARWRRPAV 144 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCSEEEEES-TTHH--HHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHhccCCCEEEECc-hhhh--HHHHHHHHhCCCEE
Confidence 0 0124556666778899999430 2111 12334567888865
No 434
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=64.35 E-value=12 Score=35.46 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|+++++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 4789999999999999999888643
No 435
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=64.33 E-value=44 Score=33.11 Aligned_cols=36 Identities=14% Similarity=0.109 Sum_probs=30.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~ 106 (537)
.|++||.|. +.|+..+++.+.+.|.+|+++..+.+.
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~ 81 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 578999994 789999999999999999998765543
No 436
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=64.33 E-value=19 Score=38.30 Aligned_cols=72 Identities=11% Similarity=0.093 Sum_probs=48.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh----hcc------CEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV----KLA------DESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~----~~a------d~~~~i~~~~~~~sy~~~~~i~~~a~ 140 (537)
.||+.|.+....+..+++.+.++|++++.+.+......... .+. +..+.. -.|...+.+.++
T Consensus 364 GKrvaI~gd~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~--------~~D~~~l~~~i~ 435 (523)
T 3u7q_B 364 GKRFALWGDPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYI--------GKDLWHLRSLVF 435 (523)
T ss_dssp TCEEEEECSHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEE--------SCCHHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEE--------CCCHHHHHHHHH
Confidence 48999998777899999999999999998865422110000 010 111221 246778888888
Q ss_pred HcCCCEEEeC
Q 009316 141 SRGCTMLHPG 150 (537)
Q Consensus 141 ~~~~d~V~pg 150 (537)
+.++|.++.+
T Consensus 436 ~~~pDLlig~ 445 (523)
T 3u7q_B 436 TDKPDFMIGN 445 (523)
T ss_dssp HTCCSEEEEC
T ss_pred hcCCCEEEEC
Confidence 8888888854
No 437
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=64.28 E-value=7.8 Score=36.10 Aligned_cols=33 Identities=24% Similarity=0.209 Sum_probs=28.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.++..+++.+.+.|+++++++.+
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 478999995 789999999999999999888644
No 438
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=64.24 E-value=4.9 Score=40.02 Aligned_cols=92 Identities=15% Similarity=0.149 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCc-HHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009316 69 CRQEKILVANRG-EIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~g-~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d 145 (537)
...-||.|+|.| .++...+++++++ ++++++|.+ .+.. ....++++. + ....|.|.+++++ ...+|
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d-~~~~-~~~~~a~~~---~---~~~~~~~~~~ll~---~~~vD 84 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTS-RTRS-HAEEFAKMV---G---NPAVFDSYEELLE---SGLVD 84 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEEC-SSHH-HHHHHHHHH---S---SCEEESCHHHHHH---SSCCS
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEc-CCHH-HHHHHHHHh---C---CCcccCCHHHHhc---CCCCC
Confidence 334689999999 7888889999887 577877763 2211 111222210 0 0113566666653 45799
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCcee
Q 009316 146 MLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 146 ~V~pg~g~lsE~~~~a~~~e~~Gl~~i 172 (537)
+|+-... ...+.+.+..+.+.|..++
T Consensus 85 ~V~i~tp-~~~H~~~~~~al~aGkhVl 110 (340)
T 1zh8_A 85 AVDLTLP-VELNLPFIEKALRKGVHVI 110 (340)
T ss_dssp EEEECCC-GGGHHHHHHHHHHTTCEEE
T ss_pred EEEEeCC-chHHHHHHHHHHHCCCcEE
Confidence 9886542 1234567777777887665
No 439
>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A
Probab=64.20 E-value=13 Score=40.65 Aligned_cols=98 Identities=10% Similarity=0.112 Sum_probs=45.6
Q ss_pred HHHHHHHHC--CCceeCCCHHHHHHhcCHHHHHHHHHHc--CCCCCCCCCcCCCCHHHHHHHHHhcCCcEEEeecCCCCC
Q 009316 159 VFVEMCREH--GINFIGPNPDSIRIMGDKSTARETMKNA--GVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGG 234 (537)
Q Consensus 159 ~~a~~~e~~--Gl~~iGp~~~~i~~~~dK~~~r~~l~~~--Gvpvp~~~~~~v~~~~~~~~~~~~ig~PvvvKp~~g~gg 234 (537)
.|.++++.. .+.++.|... .++.||..+.-+-... .-..+|.+ ...+. . +.+- ..|+||..|.+|
T Consensus 487 ~~~~~l~~~~~~v~~ieP~wk--~LlsNKaiLalLW~l~p~hp~LLpt~--f~~~~-~----~~~~--~yV~KPi~gReG 555 (652)
T 2vob_A 487 RLCDLLLGDDWEILYFEPMWK--VIPSNKAILPMIYHNHPEHPAILKAE--YELTD-E----LRKH--GYAKKPIVGRVG 555 (652)
T ss_dssp CHHHHHSSSCTTSEEESCGGG--GTTTSTTHHHHHHHHCTTCTTBCCEE--SSCCH-H----HHHH--CEEEEECC----
T ss_pred HHHHHHhcCCCceEEeChhHH--HhhcCHHHHHHHHhcccCCCCCCchh--hcCCC-c----cccC--CeEeccCCCCCC
Confidence 477778777 8889976544 4689999888766642 12233332 22222 2 1122 489999999999
Q ss_pred cceEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecccC
Q 009316 235 RGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN 274 (537)
Q Consensus 235 ~Gv~~v~~~~el~~~~~~~~~~~~~~~g~~~vlvEe~I~g 274 (537)
.||.+.+...+. ++. ....+++..+++|+|++=
T Consensus 556 ~nV~I~~~~~~~---~~~----~~g~y~~~~~IyQe~~~l 588 (652)
T 2vob_A 556 SNVIITSGDGVV---HAE----SGGKYGKRNMIYQQLFEL 588 (652)
T ss_dssp ------------------------------CEEEEECCC-
T ss_pred CCEEEEcCCchh---hhh----cccccCCCCeEEEecccC
Confidence 999998653322 111 122345688999999884
No 440
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=64.18 E-value=18 Score=33.81 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=28.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999994 789999999999999999888644
No 441
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=64.08 E-value=17 Score=38.57 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=47.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchh----hcc-------CEEEEcCCCCCCCCCCCHHHHHHHH
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV----KLA-------DESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~----~~a-------d~~~~i~~~~~~~sy~~~~~i~~~a 139 (537)
.||++|.+....+..+++.+.++|++++.+.+... ...+. .+. +..+.. -.|...+.+.+
T Consensus 360 Gkrv~i~gd~~~~~~la~~L~ElGm~vv~v~~~~~-~~~~~~~~~~ll~~~~~~~~~~v~~--------~~d~~~l~~~i 430 (519)
T 1qgu_B 360 GKKFGLYGDPDFVMGLTRFLLELGCEPTVILSHNA-NKRWQKAMNKMLDASPYGRDSEVFI--------NCDLWHFRSLM 430 (519)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHTTCEEEEEEETTC-CHHHHHHHHHHHHHSTTCTTCEEEE--------SCCHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHHHHHCCCEEEEEEeCCC-CHHHHHHHHHHHHhcCCCCCCEEEE--------CCCHHHHHHHH
Confidence 48999999888899999999999999987765432 11110 000 112222 24677777777
Q ss_pred HHcCCCEEEeC
Q 009316 140 ISRGCTMLHPG 150 (537)
Q Consensus 140 ~~~~~d~V~pg 150 (537)
++.++|.++.+
T Consensus 431 ~~~~pDLiig~ 441 (519)
T 1qgu_B 431 FTRQPDFMIGN 441 (519)
T ss_dssp HHHCCSEEEEC
T ss_pred hhcCCCEEEEC
Confidence 77788888854
No 442
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=64.08 E-value=14 Score=34.84 Aligned_cols=33 Identities=12% Similarity=0.135 Sum_probs=28.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. |.++..+++.+.+.|++|+++..+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 478999994 789999999999999999888643
No 443
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=64.06 E-value=7.9 Score=37.26 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=28.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.+.
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 67 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRP 67 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47899999 47899999999999999999886443
No 444
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=64.04 E-value=16 Score=39.76 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=30.3
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHc-CCcEEEEecCCC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEM-GIPCVAVYSTID 105 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~-Gi~~v~v~~~~d 105 (537)
++++|||.| .|.++..+++.+.+. |++|+++....+
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~ 351 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD 351 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCT
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCch
Confidence 457899999 599999999999998 899998865443
No 445
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=64.01 E-value=28 Score=33.82 Aligned_cols=32 Identities=9% Similarity=0.027 Sum_probs=28.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
+++||.|+|-|.++..+++.+.+.|+++++++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 45789999999999999999999999988773
No 446
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=63.98 E-value=18 Score=37.81 Aligned_cols=96 Identities=9% Similarity=0.089 Sum_probs=58.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CC---cEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHH-HHHHcCCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM-GI---PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLS-AAISRGCT 145 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~-Gi---~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~-~a~~~~~d 145 (537)
.+||||+|.|.++.-+++.|.+. ++ .+++++.+...........-....+. -+-.|.+++++ +.++ .|
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~-----Vdadnv~~~l~aLl~~--~D 85 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQ-----ITPQNYLEVIGSTLEE--ND 85 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECC-----CCTTTHHHHTGGGCCT--TC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEe-----ccchhHHHHHHHHhcC--CC
Confidence 36899999999999999887664 56 57777543332221111111222221 12345656554 4443 39
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCceeCC
Q 009316 146 MLHPGYGFLAENAVFVEMCREHGINFIGP 174 (537)
Q Consensus 146 ~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp 174 (537)
+|+-. .+...+....++|.+.|+.++-.
T Consensus 86 vVIN~-s~~~~~l~Im~acleaGv~YlDT 113 (480)
T 2ph5_A 86 FLIDV-SIGISSLALIILCNQKGALYINA 113 (480)
T ss_dssp EEEEC-CSSSCHHHHHHHHHHHTCEEEES
T ss_pred EEEEC-CccccCHHHHHHHHHcCCCEEEC
Confidence 88853 23335678889999999988743
No 447
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=63.95 E-value=7.3 Score=38.88 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=50.3
Q ss_pred CCCCEEEEE-cCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVA-NRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~-~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||. +.|.++..+++.|+.+|.+++++..+++......++ +|..+... +....+.+.++. ..++|.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~------~~~~~~~~~~~~-~~g~Dv 238 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYR------SEDFAAVIKAET-GQGVDI 238 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHH-SSCEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCC------chHHHHHHHHHh-CCCceE
Confidence 346889999 479999999999999999988886444332222222 45444321 112234455554 567999
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
++-..|.
T Consensus 239 vid~~g~ 245 (353)
T 4dup_A 239 ILDMIGA 245 (353)
T ss_dssp EEESCCG
T ss_pred EEECCCH
Confidence 9977663
No 448
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=63.90 E-value=6.4 Score=36.80 Aligned_cols=77 Identities=14% Similarity=0.067 Sum_probs=49.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCch-hhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEE
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTML 147 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~-~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-~~d~V 147 (537)
.|+|||.| .+.++..+++.+.+.|+++++++.+.+..... ..+.+....+ ..+..+.+.+.++.++. ++|.+
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE-----VCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEE-----ECCTTSHHHHHHHHHTCSCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEE-----EcCCCCHHHHHHHHHhcCCCCEE
Confidence 58899999 47899999999999999999886533211111 1111111111 01356677777777665 68988
Q ss_pred EeCCC
Q 009316 148 HPGYG 152 (537)
Q Consensus 148 ~pg~g 152 (537)
+-.-|
T Consensus 89 i~~Ag 93 (249)
T 3f9i_A 89 VCNAG 93 (249)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86544
No 449
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=63.85 E-value=12 Score=36.14 Aligned_cols=30 Identities=20% Similarity=0.338 Sum_probs=24.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHH-cCCcEEEEe
Q 009316 72 EKILVANR-GEIAVRVIRTAHE-MGIPCVAVY 101 (537)
Q Consensus 72 ~~iLI~~~-g~ia~~ii~aa~~-~Gi~~v~v~ 101 (537)
.||+|+|. |.++..+++.+.+ -|++++++.
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~ 37 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAAL 37 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 58999997 9999999998764 578887554
No 450
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=63.85 E-value=8.8 Score=35.77 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=28.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. |.++..+++.+.+.|++++++..+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 478999994 889999999999999999988643
No 451
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=63.80 E-value=23 Score=33.01 Aligned_cols=34 Identities=6% Similarity=-0.023 Sum_probs=29.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|+++++++.+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 47899999 57899999999999999999886543
No 452
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=63.67 E-value=30 Score=34.18 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=29.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..++|.|+|-|.++..+++.++..|+++++++..
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~ 187 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGR 187 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3578999999999999999999999998877533
No 453
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=63.66 E-value=8.7 Score=37.63 Aligned_cols=116 Identities=13% Similarity=0.124 Sum_probs=63.8
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~-ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
..||.|+|.|.++.. +++.+++. |++++++++ .+... ...++++ .+. + .|.+.+.+ ..++|+|+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d-~~~~~-~~~~~~~---~g~-~---~~~~~~~l-----~~~~D~V~ 70 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWS-PTRAK-ALPICES---WRI-P---YADSLSSL-----AASCDAVF 70 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEEC-SSCTT-HHHHHHH---HTC-C---BCSSHHHH-----HTTCSEEE
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEEC-CCHHH-HHHHHHH---cCC-C---ccCcHHHh-----hcCCCEEE
Confidence 358999999999987 88888775 788886663 22221 1122221 110 1 35566554 35799998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
-.... ....+.+..+.+.|..++.-.|-+.. ..+-..+.+.+++.|+..-.+
T Consensus 71 i~tp~-~~h~~~~~~al~~G~~v~~eKP~~~~-~~~~~~l~~~a~~~g~~~~~~ 122 (319)
T 1tlt_A 71 VHSST-ASHFDVVSTLLNAGVHVCVDKPLAEN-LRDAERLVELAARKKLTLMVG 122 (319)
T ss_dssp ECSCT-THHHHHHHHHHHTTCEEEEESSSCSS-HHHHHHHHHHHHHTTCCEEEE
T ss_pred EeCCc-hhHHHHHHHHHHcCCeEEEeCCCCCC-HHHHHHHHHHHHHcCCeEEEe
Confidence 55321 12355666667788765421111110 111223455667777766443
No 454
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=63.59 E-value=9.3 Score=35.84 Aligned_cols=32 Identities=6% Similarity=0.067 Sum_probs=28.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
.|++||.| .|.++..+++.+.+.|++++++..
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 47899999 588999999999999999988864
No 455
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=63.54 E-value=6.2 Score=40.57 Aligned_cols=33 Identities=6% Similarity=0.094 Sum_probs=27.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcC--CcEEEEec
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMG--IPCVAVYS 102 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~G--i~~v~v~~ 102 (537)
|-|+|+|+|+|.-+...++.+++++ +++++|..
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 4578999999999999999999987 77888843
No 456
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=63.47 E-value=11 Score=35.87 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=28.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999994 789999999999999999988644
No 457
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=63.39 E-value=35 Score=33.84 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=29.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..++|.|+|-|.++..+++.++.+|+++++.+..
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~ 196 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRS 196 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3578999999999999999999999998877433
No 458
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=63.35 E-value=11 Score=36.18 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=28.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5889999999999999999888643
No 459
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=63.30 E-value=23 Score=34.71 Aligned_cols=99 Identities=16% Similarity=0.250 Sum_probs=59.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~pg 150 (537)
.+.|+.+..|..+..++.+|+++|++++++.+... + ..-++.++..|++.+...
T Consensus 54 ~~~vv~~ssGN~g~alA~~a~~~G~~~~i~~p~~~--~------------------------~~k~~~~~~~Ga~V~~~~ 107 (318)
T 2rkb_A 54 CRHLVCSSGGNAGIAAAYAARKLGIPATIVLPEST--S------------------------LQVVQRLQGEGAEVQLTG 107 (318)
T ss_dssp CCEEEECCCSHHHHHHHHHHHHHTCCEEEEECTTC--C------------------------HHHHHHHHHTTCEEEECC
T ss_pred CCEEEEECCchHHHHHHHHHHHcCCCEEEEECCCC--c------------------------HHHHHHHHhcCCEEEEEC
Confidence 35788888999999999999999999998853221 0 123445566777766633
Q ss_pred CCcccccHHHH-HHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcC
Q 009316 151 YGFLAENAVFV-EMCREHGINFIGPNPDSIRIMGDKSTARETMKNAG 196 (537)
Q Consensus 151 ~g~lsE~~~~a-~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~G 196 (537)
.++ .+....+ +..++.|..++.|-.......+.+....+++++.+
T Consensus 108 ~~~-~~~~~~a~~~~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~ 153 (318)
T 2rkb_A 108 KVW-DEANLRAQELAKRDGWENVPPFDHPLIWKGHASLVQELKAVLR 153 (318)
T ss_dssp SSH-HHHHHHHHHHHHSTTEEECCSSCSHHHHHHHHHHHHHHHHHSS
T ss_pred CCH-HHHHHHHHHHHHhcCCEEeCCCCChhhccchhHHHHHHHHhcC
Confidence 222 1112222 33334455555443333444455777777777764
No 460
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=63.29 E-value=31 Score=34.08 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
-..++|.|+|-|.++..+++.++.+|+++++++.
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~ 181 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSR 181 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECC
Confidence 3457899999999999999999999999887743
No 461
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=63.09 E-value=7.2 Score=40.18 Aligned_cols=33 Identities=9% Similarity=0.026 Sum_probs=29.7
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCC--cEEEEec
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGI--PCVAVYS 102 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi--~~v~v~~ 102 (537)
+.++|+|+|+|..++..+..+++.|+ +++++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~ 39 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFER 39 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEec
Confidence 45789999999999999999999999 8888854
No 462
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=63.09 E-value=22 Score=34.80 Aligned_cols=27 Identities=19% Similarity=0.166 Sum_probs=22.1
Q ss_pred CEEEEE-cC-cHHHHHHHHHHHHcCCcEE
Q 009316 72 EKILVA-NR-GEIAVRVIRTAHEMGIPCV 98 (537)
Q Consensus 72 ~~iLI~-~~-g~ia~~ii~aa~~~Gi~~v 98 (537)
+++.|+ |. |..+..+++.+++.|++++
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G~~~v 42 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYGTNLV 42 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCCCcEE
Confidence 456666 96 8889999999999999955
No 463
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=63.08 E-value=11 Score=35.39 Aligned_cols=75 Identities=13% Similarity=0.116 Sum_probs=46.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCch-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~sy~~~~~i~~~a~~~---- 142 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.+..... ..+.+ ..+.+ +..|.+.+.++.++.
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL-------NVTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEE-------eCCCHHHHHHHHHHHHHHc
Confidence 478999994 7899999999999999999886543211111 11111 22332 244555555544432
Q ss_pred -CCCEEEeCCC
Q 009316 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~pg~g 152 (537)
++|.++-.-|
T Consensus 82 g~iD~lv~nAg 92 (248)
T 3op4_A 82 GGVDILVNNAG 92 (248)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898886544
No 464
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=63.05 E-value=5.7 Score=41.40 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=29.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
||+|+|+|+|..++-.+..+.+.|++|.++..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEcc
Confidence 68999999999999999999999999999953
No 465
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=63.01 E-value=16 Score=36.19 Aligned_cols=32 Identities=22% Similarity=0.194 Sum_probs=24.7
Q ss_pred CCEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEec
Q 009316 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~~iLI~~~g~i-----a~~ii~aa~~~Gi~~v~v~~ 102 (537)
|+|||++..+.. ...+++++++.|++|.++.+
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcC
Confidence 568988864432 46789999999999998864
No 466
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=62.99 E-value=7.1 Score=37.79 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=27.6
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
++||+|+|.|.++..++..+.+.|++++++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLID 33 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEE
Confidence 4689999999999999999999999888773
No 467
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=62.91 E-value=7.5 Score=36.54 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=28.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHH-cCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHE-MGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~-~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+ .|++++++..+
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 57899999 58899999999999 99999888643
No 468
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=62.83 E-value=8.9 Score=37.87 Aligned_cols=77 Identities=19% Similarity=0.269 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEE-EecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHH-HHHHcCCC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVA-VYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLS-AAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~-v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~-~a~~~~~d 145 (537)
...++|||.|.|.++.-.+..|+.+|..+++ +.+.++......++ +|+.+... ..+..+.++ +....++|
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~-------~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSS-------EMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETT-------TSCHHHHHHHHGGGCSSE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCC-------CCCHHHHHHhhcccCCcc
Confidence 3458999999999999999999999998754 44333333333333 56655421 233344443 34446788
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+-..|
T Consensus 232 ~v~d~~G 238 (346)
T 4a2c_A 232 LILETAG 238 (346)
T ss_dssp EEEECSC
T ss_pred ccccccc
Confidence 8886655
No 469
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=62.81 E-value=10 Score=38.06 Aligned_cols=78 Identities=17% Similarity=0.085 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCH-HHHHHHHHHcCCC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLI-PNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~-~~i~~~a~~~~~d 145 (537)
...++|||.|.|.++.-+++.|+.+|. +++++...++......++ +|..+... +...+. +.+.++.. .++|
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-----~~~~~~~~~i~~~t~-gg~D 263 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK-----DYDKPIYEVICEKTN-GGVD 263 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG-----GCSSCHHHHHHHHTT-SCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecc-----cccchHHHHHHHHhC-CCCC
Confidence 345799999999999999999999999 577774444332222233 45444211 000122 33433333 3799
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+-..|
T Consensus 264 vvid~~g 270 (373)
T 1p0f_A 264 YAVECAG 270 (373)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9996655
No 470
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=62.73 E-value=54 Score=25.79 Aligned_cols=54 Identities=7% Similarity=-0.012 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCcHH-HHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009316 69 CRQEKILVANRGEI-AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~~iLI~~~g~i-a~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V 147 (537)
+|.++|||+..... ...+.+.+++.|+++..+ .+.+..++.+++..+|.|
T Consensus 3 mm~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-----------------------------~~~~~a~~~~~~~~~dlv 53 (127)
T 2gkg_A 3 HMSKKILIVESDTALSATLRSALEGRGFTVDET-----------------------------TDGKGSVEQIRRDRPDLV 53 (127)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHHTCEEEEE-----------------------------CCHHHHHHHHHHHCCSEE
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhcCceEEEe-----------------------------cCHHHHHHHHHhcCCCEE
Confidence 44468999997665 445666777889876543 233455556666778888
Q ss_pred EeCC
Q 009316 148 HPGY 151 (537)
Q Consensus 148 ~pg~ 151 (537)
+-.+
T Consensus 54 i~d~ 57 (127)
T 2gkg_A 54 VLAV 57 (127)
T ss_dssp EEES
T ss_pred EEeC
Confidence 7544
No 471
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=62.61 E-value=25 Score=32.55 Aligned_cols=71 Identities=8% Similarity=-0.007 Sum_probs=45.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHH-cCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH---cCCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHE-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS---RGCT 145 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~-~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~---~~~d 145 (537)
+|++||.|. +.|+..+++.+.+ .|..++++....+...... ..+.. +..+.+.+.++.+. .++|
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~----~~~~~-------Dv~~~~~v~~~~~~~~~~~id 72 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL----KFIKA-------DLTKQQDITNVLDIIKNVSFD 72 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE----EEEEC-------CTTCHHHHHHHHHHTTTCCEE
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc----eEEec-------CcCCHHHHHHHHHHHHhCCCC
Confidence 578999994 7799999999988 7888887765443121111 23333 24555566555533 3688
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.++-.-|
T Consensus 73 ~lv~nAg 79 (244)
T 4e4y_A 73 GIFLNAG 79 (244)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 8875544
No 472
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=62.59 E-value=18 Score=36.30 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=28.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
..++|.|+|-|.++..+++.++.+|++++..+
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~d 194 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHD 194 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCCEEEEEC
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeC
Confidence 35799999999999999999999999977664
No 473
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=62.58 E-value=7.5 Score=38.91 Aligned_cols=94 Identities=17% Similarity=0.061 Sum_probs=55.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009316 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~p 149 (537)
+.||.|+|.|.++..+++++++. +++++++++ .+.. ....++++. +-.+....|.+.++++ ....+|+|+-
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d-~~~~-~~~~~a~~~---~~~~~~~~~~~~~~ll---~~~~~D~V~i 77 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVAS-RSLE-KAKAFATAN---NYPESTKIHGSYESLL---EDPEIDALYV 77 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEEC-SSHH-HHHHHHHHT---TCCTTCEEESSHHHHH---HCTTCCEEEE
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEc-CCHH-HHHHHHHHh---CCCCCCeeeCCHHHHh---cCCCCCEEEE
Confidence 35899999999999999999886 677877763 2211 111222210 0000112356666554 3456899886
Q ss_pred CCCcccccHHHHHHHHHCCCceeC
Q 009316 150 GYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 150 g~g~lsE~~~~a~~~e~~Gl~~iG 173 (537)
..- ...+.+.+..+.+.|.+++.
T Consensus 78 ~tp-~~~h~~~~~~al~aGk~V~~ 100 (362)
T 1ydw_A 78 PLP-TSLHVEWAIKAAEKGKHILL 100 (362)
T ss_dssp CCC-GGGHHHHHHHHHTTTCEEEE
T ss_pred cCC-hHHHHHHHHHHHHCCCeEEE
Confidence 542 12345666677777876653
No 474
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=62.57 E-value=27 Score=36.25 Aligned_cols=101 Identities=18% Similarity=0.191 Sum_probs=60.1
Q ss_pred CCEEEEEcCc----HHHHHHHHHHHHcC-CcEEEEecCCCCC---Cchh------hccCEEEEcCCCCCCCCCCCHHHHH
Q 009316 71 QEKILVANRG----EIAVRVIRTAHEMG-IPCVAVYSTIDKD---ALHV------KLADESVCIGEAPSSQSYLLIPNVL 136 (537)
Q Consensus 71 ~~~iLI~~~g----~ia~~ii~aa~~~G-i~~v~v~~~~d~~---~~~~------~~ad~~~~i~~~~~~~sy~~~~~i~ 136 (537)
.++|.|+|.+ ..+..+++.+++.| ..++.|+...+.. ..+. .-.|-.+..-| ......++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i~G~~~y~sl~~lp~~~Dlavi~vp------~~~~~~~v 81 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVP------KRFVKDTL 81 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSC------HHHHHHHH
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeECCEeccCCHHHcCCCCCEEEEecC------HHHHHHHH
Confidence 4789999976 45899999999995 7777775432110 0000 11333332211 12344556
Q ss_pred HHHHHcCCCEEEe-CCCcc--cc-----cHHHHHHHHHCCCceeCCCHH
Q 009316 137 SAAISRGCTMLHP-GYGFL--AE-----NAVFVEMCREHGINFIGPNPD 177 (537)
Q Consensus 137 ~~a~~~~~d~V~p-g~g~l--sE-----~~~~a~~~e~~Gl~~iGp~~~ 177 (537)
+.|.+.++..++- .-||- .+ +.++.+.+++.|++++||+--
T Consensus 82 ~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viGPnc~ 130 (457)
T 2csu_A 82 IQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCV 130 (457)
T ss_dssp HHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred HHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEcCCcc
Confidence 6666678887553 33441 11 456777888899999998743
No 475
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=62.57 E-value=11 Score=35.39 Aligned_cols=33 Identities=9% Similarity=0.127 Sum_probs=28.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999994 789999999999999999888644
No 476
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=62.51 E-value=6.3 Score=39.34 Aligned_cols=79 Identities=13% Similarity=0.071 Sum_probs=49.3
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.| .|.++..+++.|+.+|.+++++..+.+.......+ +|..+... +....+.+.+.....++|.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~d~ 234 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYK------KEDFSEATLKFTKGAGVNL 234 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecC------ChHHHHHHHHHhcCCCceE
Confidence 3468899999 69999999999999999988876433322211222 34443321 1122344544443357899
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
++-..|.
T Consensus 235 vi~~~G~ 241 (354)
T 2j8z_A 235 ILDCIGG 241 (354)
T ss_dssp EEESSCG
T ss_pred EEECCCc
Confidence 9977664
No 477
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=62.49 E-value=8.7 Score=39.00 Aligned_cols=79 Identities=10% Similarity=0.014 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCC-HHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLL-IPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~-~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.|.++.-+++.|+.+|. +++++..+++......++--..+.. . +... .+.+.++....++|.
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~----~--~~~~~~~~~~~~~~g~g~Dv 257 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDL----R--NSAPLRDQIDQILGKPEVDC 257 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEET----T--SSSCHHHHHHHHHSSSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcC----C--CcchHHHHHHHHhCCCCCCE
Confidence 345799999999999999999999999 7888764443322222332223321 1 1112 455555544447999
Q ss_pred EEeCCCc
Q 009316 147 LHPGYGF 153 (537)
Q Consensus 147 V~pg~g~ 153 (537)
|+-..|.
T Consensus 258 vid~~g~ 264 (398)
T 2dph_A 258 GVDAVGF 264 (398)
T ss_dssp EEECSCT
T ss_pred EEECCCC
Confidence 9977664
No 478
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=62.48 E-value=8.6 Score=36.55 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .+.|+..+++.+.+.|+++++++.+
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 4789999999999999999888653
No 479
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=62.47 E-value=47 Score=31.60 Aligned_cols=35 Identities=9% Similarity=0.210 Sum_probs=30.0
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.+
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 44 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAE 44 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChh
Confidence 478999994 77999999999999999999876554
No 480
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=62.38 E-value=10 Score=34.83 Aligned_cols=61 Identities=8% Similarity=-0.074 Sum_probs=44.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEEE
Q 009316 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~-~~d~V~ 148 (537)
.|++||.|. +.|+..+++.+.+.|+++++++.+.+ + +..|.+.+.++.++. ++|.++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------~-------------D~~~~~~v~~~~~~~g~id~lv 64 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------L-------------DISDEKSVYHYFETIGAFDHLI 64 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------C-------------CTTCHHHHHHHHHHHCSEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------c-------------CCCCHHHHHHHHHHhCCCCEEE
Confidence 478999994 78999999999999999988854332 1 245666676666654 678887
Q ss_pred eCCC
Q 009316 149 PGYG 152 (537)
Q Consensus 149 pg~g 152 (537)
-.-|
T Consensus 65 ~nAg 68 (223)
T 3uce_A 65 VTAG 68 (223)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 5544
No 481
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=62.33 E-value=8.9 Score=37.49 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=29.5
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
|.|+|||.| .|-++..+++.+.+.|++|+++..+.
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 358899999 59999999999999999998765443
No 482
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=62.33 E-value=9.8 Score=37.63 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=30.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCC
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~ 104 (537)
.++|.|+|-|.++..+++.++.+|+++++.+...
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~ 172 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSR 172 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 5789999999999999999999999998875433
No 483
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=62.25 E-value=15 Score=36.68 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=28.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEe
Q 009316 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 70 ~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~ 101 (537)
..++|.|+|-|.|+..+++.++.+|+++++.+
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d 203 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGLAIHYHN 203 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCCEEEEEC
Confidence 35899999999999999999999999988764
No 484
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=62.18 E-value=7 Score=38.55 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=48.0
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCch-hhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~-~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d 145 (537)
...++|||.|. |.++..+++.|+.+|.+++++..+++..... ..+ +|..+... +....+.+.+.. ..++|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~-~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYK------NEDLAAGLKREC-PKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETT------TSCHHHHHHHHC-TTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECC------CHHHHHHHHHhc-CCCce
Confidence 34689999997 9999999999999999988886443322222 222 34444321 111233344333 34789
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.++-..|
T Consensus 221 ~vi~~~g 227 (336)
T 4b7c_A 221 VFFDNVG 227 (336)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9986655
No 485
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=62.17 E-value=20 Score=37.34 Aligned_cols=35 Identities=6% Similarity=0.046 Sum_probs=30.2
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHc---CCcEEEEecCC
Q 009316 70 RQEKILVAN-RGEIAVRVIRTAHEM---GIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~~iLI~~-~g~ia~~ii~aa~~~---Gi~~v~v~~~~ 104 (537)
.+|+|||.| .|.++..+++.+.+. |++++++....
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~ 110 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAE 110 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCC
Confidence 468999999 599999999999998 99999986543
No 486
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=62.17 E-value=17 Score=34.31 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=28.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|+++++++.+
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999999988644
No 487
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=62.16 E-value=9.5 Score=35.39 Aligned_cols=76 Identities=12% Similarity=0.148 Sum_probs=45.9
Q ss_pred CEE--EEEcCcHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhhccC----EEEEcCCCCCCCCCCC----HHHHHHHH
Q 009316 72 EKI--LVANRGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLL----IPNVLSAA 139 (537)
Q Consensus 72 ~~i--LI~~~g~ia~~ii~aa~~~--Gi~~v~v~~~~d~~~~~~~~ad----~~~~i~~~~~~~sy~~----~~~i~~~a 139 (537)
+|| ++.|.|..+..+++++++. ++++++|.++.+. ++....|. ..+.+. ..++.+ -+++++..
T Consensus 4 ~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~-~~v~~~A~~~gIp~~~~~----~~~~~~~~~~~~~~~~~l 78 (212)
T 3av3_A 4 KRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPG-AKVIERAARENVPAFVFS----PKDYPSKAAFESEILREL 78 (212)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTT-CHHHHHHHHTTCCEEECC----GGGSSSHHHHHHHHHHHH
T ss_pred cEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCC-cHHHHHHHHcCCCEEEeC----cccccchhhhHHHHHHHH
Confidence 566 4458889999999999877 6788888776432 22233322 122222 122333 24677788
Q ss_pred HHcCCCEEEe-CCC
Q 009316 140 ISRGCTMLHP-GYG 152 (537)
Q Consensus 140 ~~~~~d~V~p-g~g 152 (537)
++.++|.|+- +|+
T Consensus 79 ~~~~~Dliv~a~y~ 92 (212)
T 3av3_A 79 KGRQIDWIALAGYM 92 (212)
T ss_dssp HHTTCCEEEESSCC
T ss_pred HhcCCCEEEEchhh
Confidence 8888887664 344
No 488
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=62.13 E-value=12 Score=35.32 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=28.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5889999999999999999888643
No 489
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=62.02 E-value=16 Score=36.05 Aligned_cols=98 Identities=14% Similarity=0.030 Sum_probs=52.5
Q ss_pred CCEEEEEcC------cHHHHHHHHHHHHc-CCcEEEEecCCCCC--Cch-hhccCEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009316 71 QEKILVANR------GEIAVRVIRTAHEM-GIPCVAVYSTIDKD--ALH-VKLADESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~~iLI~~~------g~ia~~ii~aa~~~-Gi~~v~v~~~~d~~--~~~-~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~ 140 (537)
++|||++.. |.....+..-++.+ |+++.++....... ... ....-..+.+..............+.++++
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAEIIR 83 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHHHHHH
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHHHHHHH
Confidence 456777653 44444444444444 89988886554322 000 111223444432211122234567888889
Q ss_pred HcCCCEEEeCCCcccccHHHHHHHHHCCCc
Q 009316 141 SRGCTMLHPGYGFLAENAVFVEMCREHGIN 170 (537)
Q Consensus 141 ~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~ 170 (537)
+.++|.||....+. ...++..+...|++
T Consensus 84 ~~~~Dvv~~~~~~~--~~~~~~~~~~~~~~ 111 (394)
T 3okp_A 84 EREIDNVWFGAAAP--LALMAGTAKQAGAS 111 (394)
T ss_dssp HTTCSEEEESSCTT--GGGGHHHHHHTTCS
T ss_pred hcCCCEEEECCcch--HHHHHHHHHhcCCC
Confidence 99999999654322 22344456677775
No 490
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=61.98 E-value=8.8 Score=37.68 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=29.7
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..+++|||.|. |.++..+++.+.+.|++|+++...
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34689999996 999999999999999999998654
No 491
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=61.90 E-value=14 Score=36.90 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=25.0
Q ss_pred CCEEEEEcCcHH-----HHHHHHHHHHcCCcEEEEecC
Q 009316 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~g~i-----a~~ii~aa~~~Gi~~v~v~~~ 103 (537)
.+|||++..+.. ...+++++++.|++|.++...
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccH
Confidence 357888775433 367999999999999988653
No 492
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=61.76 E-value=69 Score=33.12 Aligned_cols=111 Identities=19% Similarity=0.196 Sum_probs=67.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHH-----------
Q 009316 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAA----------- 139 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a----------- 139 (537)
-++|.|-|-|..+..+++.+.++|.++|++.. .+ -.++ ++ +=+|.+++..+.
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD-~~----------G~i~-d~-----~Gid~e~l~~l~e~k~~~~g~v~ 297 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEFGARVITASD-SS----------GTVV-DE-----SGFTKEKLARLIEIKSSRDGRVA 297 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEEE-TT----------EEEE-CT-----TCCCHHHHHHHHHHHTSTTCCHH
T ss_pred CCEEEEeCCChHHHHHHHHHHhcCCeEEEEec-CC----------ceEE-eC-----CCCCHHHHHHHHHHhcccCCccc
Confidence 58999999999999999999999999998852 11 1111 10 113333333221
Q ss_pred ---H-------------HcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 009316 140 ---I-------------SRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 140 ---~-------------~~~~d~V~pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~ 202 (537)
+ ...||..+|+-.--.-+.+-+..+...|+.++-.... .---..+.++|++.||-+.|.
T Consensus 298 ~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~IaEgAN----~p~t~eA~~iL~~rGIl~~PD 372 (450)
T 4fcc_A 298 DYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQLIANGVKAVAEGAN----MPTTIEATELFQQAGVLFAPG 372 (450)
T ss_dssp HHHHHHTCEEEETCCGGGSCCSEEEECSCTTCBCHHHHHHHHHTTCCEEECCSS----SCBCHHHHHHHHHTTCEEECH
T ss_pred cccccCCcEEecCcccccCCccEEeeccccccccHHHHHHHHhcCceEEecCCC----CCCCHHHHHHHHHCCCEEECh
Confidence 1 2358999998422112456677777766665422100 000112346788999999886
No 493
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=61.75 E-value=9 Score=36.89 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=28.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEE
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAV 100 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v 100 (537)
|+++|.|+|. |.++..+++.+.+.|++++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~ 41 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAI 41 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEE
Confidence 4579999999 999999999999999988766
No 494
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=61.61 E-value=5.7 Score=40.31 Aligned_cols=144 Identities=14% Similarity=0.170 Sum_probs=80.6
Q ss_pred CCEEEEEcCc-HHHHHHHHHHHHc-CCcEEEEecCCCCCCchhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009316 71 QEKILVANRG-EIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~~iLI~~~g-~ia~~ii~aa~~~-Gi~~v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~V~ 148 (537)
..||.|+|.| .++...++++++. +++++++++ .+.. ....++.+. -+ ..|.+.+++++ ...+|+|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~a~~~-g~------~~~~~~~ell~---~~~vD~V~ 69 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACD-PNED-VRERFGKEY-GI------PVFATLAEMMQ---HVQMDAVY 69 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEEC-SCHH-HHHHHHHHH-TC------CEESSHHHHHH---HSCCSEEE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEe-CCHH-HHHHHHHHc-CC------CeECCHHHHHc---CCCCCEEE
Confidence 4689999999 7888888888886 678887763 2211 111222211 01 13667666654 46799998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCCCCc-CCCCHHHHHHHHH--hcCCcEE
Q 009316 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG-LLQSTEEAVKLAD--ELGFPVM 225 (537)
Q Consensus 149 pg~g~lsE~~~~a~~~e~~Gl~~iGp~~~~i~~~~dK~~~r~~l~~~Gvpvp~~~~~-~v~~~~~~~~~~~--~ig~Pvv 225 (537)
-..-. ..+.+.+..+.+.|.+++.-.|-+.. ..+=..+.+++++.|+.+--++.. .......+.+.++ .+|-+..
T Consensus 70 i~tp~-~~H~~~~~~al~aGk~Vl~EKP~a~~-~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~ 147 (387)
T 3moi_A 70 IASPH-QFHCEHVVQASEQGLHIIVEKPLTLS-RDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQEGSVGRVSM 147 (387)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECSCCCSC-HHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHHCTTCCEEE
T ss_pred EcCCc-HHHHHHHHHHHHCCCceeeeCCccCC-HHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHhcCCCCCeEE
Confidence 65421 23466777788888876532221111 111123445677778775333211 1122345555554 3677776
Q ss_pred Eee
Q 009316 226 IKA 228 (537)
Q Consensus 226 vKp 228 (537)
+..
T Consensus 148 ~~~ 150 (387)
T 3moi_A 148 LNC 150 (387)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 495
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=61.61 E-value=15 Score=34.63 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=29.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecC
Q 009316 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~ 103 (537)
..|++||.|. +.|+..+++.+.+.|+++++++.+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999994 789999999999999999988644
No 496
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=61.57 E-value=15 Score=34.82 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=29.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCcEEEEecCCC
Q 009316 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~~iLI~~-~g~ia~~ii~aa~~~Gi~~v~v~~~~d 105 (537)
.|++||.| .|.++..+++.+.+.|+++++++.+.+
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 69 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHP 69 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999 478999999999999999998865443
No 497
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=61.56 E-value=11 Score=37.86 Aligned_cols=78 Identities=18% Similarity=0.078 Sum_probs=47.4
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCC-cEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCH-HHHHHHHHHcCCC
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLI-PNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi-~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~-~~i~~~a~~~~~d 145 (537)
...++|||.|.|.++.-+++.|+.+|. +++++...++......++ +|..+... +...+. +.+.++.. .++|
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~~~~~~~~v~~~~~-~g~D 262 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ-----DFSKPIQEVLIEMTD-GGVD 262 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG-----GCSSCHHHHHHHHTT-SCBS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc-----cccccHHHHHHHHhC-CCCC
Confidence 345799999999999999999999999 577775443332222223 45444211 101122 33433333 3799
Q ss_pred EEEeCCC
Q 009316 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~pg~g 152 (537)
.|+-..|
T Consensus 263 ~vid~~g 269 (373)
T 2fzw_A 263 YSFECIG 269 (373)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9996655
No 498
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=61.43 E-value=13 Score=36.59 Aligned_cols=78 Identities=19% Similarity=0.167 Sum_probs=46.5
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCcEEEEecCCCCCCchhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009316 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~~iLI~~~-g~ia~~ii~aa~~~Gi~~v~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~sy~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|. |.++..+++.++..|.+++++..+.+.......+ ++..+... +..+..+.+......++|.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~------~~~~~~~~~~~~~~~~~d~ 217 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYK------TVNSLEEALKKASPDGYDC 217 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETT------SCSCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecC------CHHHHHHHHHHHhCCCCeE
Confidence 34588999996 9999999999999999988886433221111122 23333221 1123333322222246899
Q ss_pred EEeCCC
Q 009316 147 LHPGYG 152 (537)
Q Consensus 147 V~pg~g 152 (537)
++-..|
T Consensus 218 vi~~~g 223 (333)
T 1v3u_A 218 YFDNVG 223 (333)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 986665
No 499
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=61.39 E-value=25 Score=34.51 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCcEEEEec
Q 009316 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 69 ~~~~~iLI~~~g~ia~~ii~aa~~~Gi~~v~v~~ 102 (537)
-..++|.|+|-|.++..+++.++.+|+++++++.
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~ 173 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDI 173 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECC
Confidence 3457999999999999999999999999887743
No 500
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=61.37 E-value=7.4 Score=39.47 Aligned_cols=33 Identities=15% Similarity=0.032 Sum_probs=29.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHH---cCCcEEEEecC
Q 009316 71 QEKILVANRGEIAVRVIRTAHE---MGIPCVAVYST 103 (537)
Q Consensus 71 ~~~iLI~~~g~ia~~ii~aa~~---~Gi~~v~v~~~ 103 (537)
|++|+|+|+|..++..+..+++ .|++++++...
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~ 36 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKS 36 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCC
Confidence 4789999999999999999999 89999999643
Done!