Your job contains 1 sequence.
>009322
MASKLIGTAPREAENPYELSIRQAFDALESKLRPPFALTVPNPQEYMQLNRAILYGVLCE
PHFAKVHIKHLHAIVTDGYALFVSLLVKVVKELYVKLFDSVKNQLIWVTKEMINVSAVGF
DGLLVSLLRQIVGGDFSDGNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRLLADH
CRLLTNSKLDVLKCLEIDFCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVL
NPSEFKTPGFSDISQLYHLRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQAWFAKK
FLFGPERETLIVDIIRFICCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETNAKLAL
FYDWLFFDESVDNIMNIEPAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKDVIARG
VKSAFATLVHKGVVQSLDVLVSCKTLSPYLKERLRKIQVLEVRVPNELHLLHISQHSMET
FNLPSPTPCSETERQPARTGEYGLQIKSADEPIAVSDDLVIACHSSPNNGVTFESSV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009322
(537 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129935 - symbol:emb2739 "AT4G14590" species:3... 1003 3.8e-101 1
UNIPROTKB|E1BN70 - symbol:INTS3 "Uncharacterized protein"... 793 6.8e-79 1
MGI|MGI:2140050 - symbol:Ints3 "integrator complex subuni... 792 8.7e-79 1
RGD|1304593 - symbol:Ints3 "integrator complex subunit 3"... 792 8.7e-79 1
UNIPROTKB|F1SFW4 - symbol:INTS3 "Uncharacterized protein"... 785 4.8e-78 1
UNIPROTKB|Q5RE70 - symbol:INTS3 "Integrator complex subun... 783 7.9e-78 1
UNIPROTKB|Q68E01 - symbol:INTS3 "Integrator complex subun... 774 7.1e-77 1
ZFIN|ZDB-GENE-060503-634 - symbol:ints3 "integrator compl... 770 1.9e-76 1
FB|FBgn0262117 - symbol:IntS3 "Integrator 3" species:7227... 734 2.7e-72 1
>TAIR|locus:2129935 [details] [associations]
symbol:emb2739 "AT4G14590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97336 EMBL:AL161539
eggNOG:NOG252340 KO:K13140 InterPro:IPR019333 Pfam:PF10189
IPI:IPI00519588 PIR:D71408 RefSeq:NP_193195.1 UniGene:At.33265
EnsemblPlants:AT4G14590.1 GeneID:827107 KEGG:ath:AT4G14590
TAIR:At4g14590 HOGENOM:HOG000114090 InParanoid:O23315 OMA:TSAFREI
PhylomeDB:O23315 ProtClustDB:CLSN2685344 ArrayExpress:O23315
Genevestigator:O23315 Uniprot:O23315
Length = 508
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 197/334 (58%), Positives = 250/334 (74%)
Query: 148 VSLFLGKWDCLLEEEPLVLSSALYTFLRLLADHCRLLTNSKLDVLKCLEIDFCVKMLREQ 207
+SLFL KW+CLL++ PLVL+SALY+FLRLLADH R+L KL+ +K LEI FCVKM REQ
Sbjct: 138 ISLFLEKWECLLDDSPLVLTSALYSFLRLLADHYRVLGVVKLENVKRLEIKFCVKMFREQ 197
Query: 208 FQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVLNPSEFKTPGFSDISQLYHLRTSSRYFL 267
L LKIGRDLI LLQDL HV FR IW DLV N S++Y L+TSSRYFL
Sbjct: 198 LHLSLKIGRDLILLLQDLSHVSEFREIWNDLVSN----------HCSEIYQLKTSSRYFL 247
Query: 268 TRITPEMETQLRFLLTHVKLGSQKRYQAWFAKKFLFGPERETLIVDIIRFICCGHHPSNE 327
RITPEMETQLRFLL +VKLGS KR+Q WF KKFL GPE+ETL++DI+RF+CC HP+NE
Sbjct: 248 LRITPEMETQLRFLLGNVKLGSHKRHQIWFLKKFLLGPEKETLLIDIVRFVCCVIHPTNE 307
Query: 328 IIQSDIIPRWAVIGWLLKSCQKNH-VETNAKLALFYDWLFFDESVDNIMNIEPAMLLMVC 386
II+S+I+PRWA+IGWLL+ C++NH +E + LALFYDWLFFDE +DNIMN+EPA LLMV
Sbjct: 308 IIRSEIMPRWAIIGWLLELCRQNHHIERSVMLALFYDWLFFDERIDNIMNVEPAALLMVW 367
Query: 387 SIPRYIDMTHTLLDFLFLLVDNYDVDRKDVIARGVKSAFATLVHKGVVQSLDVLVSCKTL 446
SIP+Y +TH+LL+FL LV+ YD+ R+D I RG+ SAF + KGV++SLD+ ++ L
Sbjct: 368 SIPQYPHITHSLLEFLLHLVETYDITRRDTIVRGLTSAFREIERKGVIRSLDIFLANPAL 427
Query: 447 SPYLKERLRKIQVLEVRVPNELHLLHISQHSMET 480
+P LK++L + ++L +S S +T
Sbjct: 428 APDLKKKLANLLSCHQEKTVHVNLNQVSVLSKQT 461
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 142/241 (58%), Positives = 171/241 (70%)
Query: 1 MASKLIGTAPREAENPYELSIRQAFDALESKLRPPFALTVPNPQEYMQLNRAILYGVLCE 60
+ SKLI + E EN ELS+RQAF+ L+ KLRPPF+L +P+PQEY++LN+AI+YGVLCE
Sbjct: 6 VTSKLIRVSLHEVENQLELSLRQAFENLQPKLRPPFSLELPDPQEYLELNKAIVYGVLCE 65
Query: 61 PHFAKVHIKHLHAIVTDGYAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVSAVGF 120
P+ +K HIKHLHA+VTDGYA DS K QLIWVTKEMI+VS+VG
Sbjct: 66 PNSSKTHIKHLHALVTDGYAFFTSLLIGIVVELYVKLVDSAKIQLIWVTKEMIDVSSVGI 125
Query: 121 DGLLVSLLRQIVGGDFSDGNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRLLADH 180
+ L+VSLLR+I G +SLFL KW+CLL++ PLVL+SALY+FLRLLADH
Sbjct: 126 EDLVVSLLRRI-G--------------ISLFLEKWECLLDDSPLVLTSALYSFLRLLADH 170
Query: 181 CRLLTNSKLDVLKCLEIDFCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVL 240
R+L KL+ +K LEI FCVKM REQ L LKIGRDLI LLQDL HV FR IW DLV
Sbjct: 171 YRVLGVVKLENVKRLEIKFCVKMFREQLHLSLKIGRDLILLLQDLSHVSEFREIWNDLVS 230
Query: 241 N 241
N
Sbjct: 231 N 231
>UNIPROTKB|E1BN70 [details] [associations]
symbol:INTS3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070876 "SOSS complex" evidence=IEA] [GO:0032039
"integrator complex" evidence=IEA] [GO:0016180 "snRNA processing"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] GO:GO:0006281
GO:GO:0010212 GO:GO:0031576 GO:GO:0032039 GO:GO:0016180 CTD:65123
GeneTree:ENSGT00390000014184 KO:K13140 OMA:TWQLFLA GO:GO:0070876
InterPro:IPR019333 Pfam:PF10189 EMBL:DAAA02007178 EMBL:DAAA02007179
IPI:IPI00694462 RefSeq:NP_001180016.1 UniGene:Bt.1389 PRIDE:E1BN70
Ensembl:ENSBTAT00000008186 GeneID:511052 KEGG:bta:511052
NextBio:20869749 Uniprot:E1BN70
Length = 1040
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 163/438 (37%), Positives = 260/438 (59%)
Query: 19 LSIRQAFDALESKLRPPFALTVPNPQEYMQLNRAILYGVLCEPHFAKVHIKHLHAIVTDG 78
+S R+A DAL A P ++ ++ + VL EP A+ + L + DG
Sbjct: 64 VSEREANDALN-------AYVCKGPPQHEEICLGLFTLVLTEPAQAQKCYRDLALVSRDG 116
Query: 79 YAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVSAVGFDGLLVSLLRQIVGGDFSD 138
D+ + QL+W+ +E++ +G DG+ ++ ++QI GGD +
Sbjct: 117 MNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTA 176
Query: 139 GNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRLLADHCRLLTNSKLDVLKCLEID 198
N+WL ++ + + + + +L+ ++++ A+YT+LRL+ DH ++L L+ E+D
Sbjct: 177 KNIWLAESVLDILMEQREWVLKSS-ILIAMAVYTYLRLIVDHHG---TAQLQALRQKEVD 232
Query: 199 FCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVLNPSEFKTPGFSDISQLYH 258
FC+ +LRE+F CL +GRDL+RLLQ++ +P F +WKD++ NP +P F+ I QL
Sbjct: 233 FCISLLRERFMECLMVGRDLVRLLQNVARIPEFELLWKDIIHNPQAL-SPQFTGILQLLQ 291
Query: 259 LRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQAWFAKKFLFGPERETLIVDIIRFI 318
RTS ++ R+TP+MET+L F+ + V+ G QKRYQ WF +++L P+ ++L D+IR+I
Sbjct: 292 SRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYI 351
Query: 319 CCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETNAKLALFYDWLFFDESVDNIMNIE 378
C HPSNE++ SDI+PRWA+IGWLL +C N +NAKLALFYDWLFF D+IMNIE
Sbjct: 352 CGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASNAKLALFYDWLFFSPDKDSIMNIE 411
Query: 379 PAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKDVIARGVKSAFATLVHKGVVQSLD 438
PA+L+M S+ + +T TLLDF+ ++ N+ + + +GV S+ +V K V+ L
Sbjct: 412 PAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLA 471
Query: 439 VLVSCKTLSPYLKERLRK 456
L L L+ LR+
Sbjct: 472 PLFDNPKLDKELRAMLRE 489
>MGI|MGI:2140050 [details] [associations]
symbol:Ints3 "integrator complex subunit 3" species:10090
"Mus musculus" [GO:0000075 "cell cycle checkpoint" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032039 "integrator complex"
evidence=ISO] [GO:0070876 "SOSS complex" evidence=ISO]
MGI:MGI:2140050 GO:GO:0006281 GO:GO:0010212 GO:GO:0031576
GO:GO:0032039 GO:GO:0016180 CTD:65123 eggNOG:NOG252340
GeneTree:ENSGT00390000014184 HOGENOM:HOG000113080
HOVERGEN:HBG081800 KO:K13140 OMA:TWQLFLA OrthoDB:EOG483D3T
GO:GO:0070876 InterPro:IPR019333 Pfam:PF10189 ChiTaRS:INTS3
EMBL:AK040147 EMBL:AK043206 EMBL:BC003209 EMBL:BC055344
IPI:IPI00380394 IPI:IPI00944687 RefSeq:NP_663515.2
RefSeq:NP_849207.2 UniGene:Mm.268564 ProteinModelPortal:Q7TPD0
DIP:DIP-59970N STRING:Q7TPD0 PhosphoSite:Q7TPD0 PaxDb:Q7TPD0
PRIDE:Q7TPD0 Ensembl:ENSMUST00000029542 Ensembl:ENSMUST00000071488
GeneID:229543 KEGG:mmu:229543 UCSC:uc008qcd.1 UCSC:uc008qcf.1
InParanoid:A0A4X3 NextBio:379499 Bgee:Q7TPD0 CleanEx:MM_INTS3
Genevestigator:Q7TPD0 GermOnline:ENSMUSG00000027933 Uniprot:Q7TPD0
Length = 1041
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 164/438 (37%), Positives = 259/438 (59%)
Query: 19 LSIRQAFDALESKLRPPFALTVPNPQEYMQLNRAILYGVLCEPHFAKVHIKHLHAIVTDG 78
+S R+A DAL A P ++ ++ + VL EP A+ + L + DG
Sbjct: 65 VSEREANDALN-------AYVCKGPPQHEEICLGLFTLVLTEPAQAQKCYRDLALVSRDG 117
Query: 79 YAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVSAVGFDGLLVSLLRQIVGGDFSD 138
D+ + QL+W+ +E++ +G DG+ ++ ++QI GGD +
Sbjct: 118 MNIVLNKINQLLMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTA 177
Query: 139 GNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRLLADHCRLLTNSKLDVLKCLEID 198
N+WL ++ + + + +L+ ++++ A+YT+LRL+ DH ++L L+ E+D
Sbjct: 178 KNIWLAESVLDILTEQREWVLKSS-ILIAMAVYTYLRLIVDHHG---TAQLQTLRQKEVD 233
Query: 199 FCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVLNPSEFKTPGFSDISQLYH 258
FC+ +LRE+F CL IGRDL+RLLQ++ +P F +WKD++ NP +P F+ I QL
Sbjct: 234 FCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWKDIIHNPQAL-SPQFTGILQLLQ 292
Query: 259 LRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQAWFAKKFLFGPERETLIVDIIRFI 318
RTS ++ R+TP+MET+L F+ + V+ G QKRYQ WF +++L P+ ++L D+IR+I
Sbjct: 293 SRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYI 352
Query: 319 CCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETNAKLALFYDWLFFDESVDNIMNIE 378
C HPSNE++ SDI+PRWA+IGWLL +C N +NAKLALFYDWLFF D+IMNIE
Sbjct: 353 CGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASNAKLALFYDWLFFSPEKDSIMNIE 412
Query: 379 PAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKDVIARGVKSAFATLVHKGVVQSLD 438
PA+L+M S+ + +T TLLDF+ ++ N+ + + +GV S+ +V K V+ L
Sbjct: 413 PAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLA 472
Query: 439 VLVSCKTLSPYLKERLRK 456
L L L+ LR+
Sbjct: 473 PLFDNPKLDKELRSMLRE 490
>RGD|1304593 [details] [associations]
symbol:Ints3 "integrator complex subunit 3" species:10116
"Rattus norvegicus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0010212 "response to ionizing
radiation" evidence=IEA;ISO] [GO:0016180 "snRNA processing"
evidence=IEA;ISO] [GO:0032039 "integrator complex"
evidence=IEA;ISO] [GO:0070876 "SOSS complex" evidence=IEA;ISO]
RGD:1304593 GO:GO:0006281 GO:GO:0010212 GO:GO:0031576 GO:GO:0032039
GO:GO:0016180 CTD:65123 GeneTree:ENSGT00390000014184 KO:K13140
OMA:TWQLFLA OrthoDB:EOG483D3T GO:GO:0070876 InterPro:IPR019333
Pfam:PF10189 IPI:IPI00373237 RefSeq:XP_001075102.1
RefSeq:XP_342289.2 UniGene:Rn.11507 Ensembl:ENSRNOT00000020575
GeneID:361988 KEGG:rno:361988 UCSC:RGD:1304593 NextBio:678298
ArrayExpress:D3ZUT9 Uniprot:D3ZUT9
Length = 1041
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 164/438 (37%), Positives = 259/438 (59%)
Query: 19 LSIRQAFDALESKLRPPFALTVPNPQEYMQLNRAILYGVLCEPHFAKVHIKHLHAIVTDG 78
+S R+A DAL A P ++ ++ + VL EP A+ + L + DG
Sbjct: 65 VSEREANDALN-------AYVCKGPPQHEEICLGLFTLVLTEPAQAQKCYRDLALVSRDG 117
Query: 79 YAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVSAVGFDGLLVSLLRQIVGGDFSD 138
D+ + QL+W+ +E++ +G DG+ ++ ++QI GGD +
Sbjct: 118 MNIVLNKINQLLMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTA 177
Query: 139 GNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRLLADHCRLLTNSKLDVLKCLEID 198
N+WL ++ + + + +L+ ++++ A+YT+LRL+ DH ++L L+ E+D
Sbjct: 178 KNIWLAESVLDILTEQREWVLKSS-ILIAMAVYTYLRLIVDHHG---TAQLQTLRQKEVD 233
Query: 199 FCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVLNPSEFKTPGFSDISQLYH 258
FC+ +LRE+F CL IGRDL+RLLQ++ +P F +WKD++ NP +P F+ I QL
Sbjct: 234 FCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWKDIIHNPQAL-SPQFTGILQLLQ 292
Query: 259 LRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQAWFAKKFLFGPERETLIVDIIRFI 318
RTS ++ R+TP+MET+L F+ + V+ G QKRYQ WF +++L P+ ++L D+IR+I
Sbjct: 293 SRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYI 352
Query: 319 CCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETNAKLALFYDWLFFDESVDNIMNIE 378
C HPSNE++ SDI+PRWA+IGWLL +C N +NAKLALFYDWLFF D+IMNIE
Sbjct: 353 CGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASNAKLALFYDWLFFSPDKDSIMNIE 412
Query: 379 PAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKDVIARGVKSAFATLVHKGVVQSLD 438
PA+L+M S+ + +T TLLDF+ ++ N+ + + +GV S+ +V K V+ L
Sbjct: 413 PAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLA 472
Query: 439 VLVSCKTLSPYLKERLRK 456
L L L+ LR+
Sbjct: 473 PLFDNPKLDKELRSMLRE 490
>UNIPROTKB|F1SFW4 [details] [associations]
symbol:INTS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070876 "SOSS complex" evidence=IEA] [GO:0032039
"integrator complex" evidence=IEA] [GO:0016180 "snRNA processing"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] GO:GO:0006281
GO:GO:0010212 GO:GO:0031576 GO:GO:0032039 GO:GO:0016180 CTD:65123
GeneTree:ENSGT00390000014184 KO:K13140 OMA:TWQLFLA GO:GO:0070876
InterPro:IPR019333 Pfam:PF10189 EMBL:CU137691 RefSeq:NP_001230251.1
UniGene:Ssc.2238 Ensembl:ENSSSCT00000007199 GeneID:100152330
KEGG:ssc:100152330 Uniprot:F1SFW4
Length = 1040
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 164/438 (37%), Positives = 258/438 (58%)
Query: 19 LSIRQAFDALESKLRPPFALTVPNPQEYMQLNRAILYGVLCEPHFAKVHIKHLHAIVTDG 78
+S R+A DAL A P ++ ++ + VL EP A+ + L + DG
Sbjct: 64 VSEREANDALN-------AYVCKGPPQHEEICLGLFTLVLTEPAQAQKCYRDLALVSRDG 116
Query: 79 YAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVSAVGFDGLLVSLLRQIVGGDFSD 138
D+ + QL+W+ +E++ +G DG+ ++ ++QI GGD +
Sbjct: 117 MNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTA 176
Query: 139 GNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRLLADHCRLLTNSKLDVLKCLEID 198
N+WL ++ + + + +L+ ++++ A+YT+LRL+ DH + L L+ E+D
Sbjct: 177 KNIWLAESVLDILTEQREWVLKSS-ILIAMAVYTYLRLIVDHHG---TTPLLALRQKEVD 232
Query: 199 FCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVLNPSEFKTPGFSDISQLYH 258
FC+ +LRE+F CL IGRDL+RLLQ++ +P F +WKD++ NP +P F+ I QL
Sbjct: 233 FCISLLRERFMECLMIGRDLVRLLQNVARIPEFEQLWKDIIHNPQAL-SPQFTGILQLLQ 291
Query: 259 LRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQAWFAKKFLFGPERETLIVDIIRFI 318
RTS ++ R+TP+MET+L F+ + V+ G QKRYQ WF +++L P+ ++L D+IR+I
Sbjct: 292 SRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYI 351
Query: 319 CCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETNAKLALFYDWLFFDESVDNIMNIE 378
C HPSNE++ SDI+PRWA+IGWLL +C N +NAKLALFYDWLFF D+IMNIE
Sbjct: 352 CGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASNAKLALFYDWLFFSPDKDSIMNIE 411
Query: 379 PAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKDVIARGVKSAFATLVHKGVVQSLD 438
PA+L+M S+ + +T TLLDF+ ++ N+ + + +GV S+ +V K V+ L
Sbjct: 412 PAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLA 471
Query: 439 VLVSCKTLSPYLKERLRK 456
L L L+ LR+
Sbjct: 472 PLFDNPKLDKELRAMLRE 489
>UNIPROTKB|Q5RE70 [details] [associations]
symbol:INTS3 "Integrator complex subunit 3" species:9601
"Pongo abelii" [GO:0000075 "cell cycle checkpoint" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS]
GO:GO:0006281 GO:GO:0010212 GO:GO:0031576 CTD:65123
HOVERGEN:HBG081800 KO:K13140 GO:GO:0070876 InterPro:IPR019333
Pfam:PF10189 EMBL:CR857667 RefSeq:NP_001124909.1 UniGene:Pab.12165
PRIDE:Q5RE70 GeneID:100171777 KEGG:pon:100171777 InParanoid:Q5RE70
Uniprot:Q5RE70
Length = 1043
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 155/400 (38%), Positives = 244/400 (61%)
Query: 57 VLCEPHFAKVHIKHLHAIVTDGYAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVS 116
+L EP A+ + L + DG D+ + QL+W+ +E++
Sbjct: 98 ILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSG 157
Query: 117 AVGFDGLLVSLLRQIVGGDFSDGNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRL 176
+G DG+ ++ ++QI GGD + N+WL ++ + + + +L+ ++++ A+YT+LRL
Sbjct: 158 VLGADGVCMTFMKQIAGGDVTAKNIWLAESVLDILTEQREWVLKSS-ILIAMAVYTYLRL 216
Query: 177 LADHCRLLTNSKLDVLKCLEIDFCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWK 236
+ DH ++L L+ E+DFC+ +LRE+F CL IGRDL+RLLQ++ +P F +WK
Sbjct: 217 IVDHHG---TAQLQALRQKEVDFCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWK 273
Query: 237 DLVLNPSEFKTPGFSDISQLYHLRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQAW 296
D++ NP +P F+ I QL RTS ++ R+TP+MET+L F+ + V+ G QKRYQ W
Sbjct: 274 DIIHNPQAL-SPQFTGILQLLQSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDW 332
Query: 297 FAKKFLFGPERETLIVDIIRFICCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETNA 356
F +++L P+ ++L D+IR+IC HPSNE++ SDI+PRWA+IGWLL +C N +NA
Sbjct: 333 FQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTACTSNVAASNA 392
Query: 357 KLALFYDWLFFDESVDNIMNIEPAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKDV 416
KLALFYDWLFF D+IMNIEPA+L+M S+ + +T TLLDF+ ++ N+ +
Sbjct: 393 KLALFYDWLFFSPDKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGH 452
Query: 417 IARGVKSAFATLVHKGVVQSLDVLVSCKTLSPYLKERLRK 456
+ +GV S+ +V K V+ L L L L+ LR+
Sbjct: 453 VRQGVFSSLNHIVEKRVLAHLAPLFDNPKLDKELRAMLRE 492
>UNIPROTKB|Q68E01 [details] [associations]
symbol:INTS3 "Integrator complex subunit 3" species:9606
"Homo sapiens" [GO:0070876 "SOSS complex" evidence=IDA] [GO:0006281
"DNA repair" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000075 "cell cycle
checkpoint" evidence=IMP] [GO:0010212 "response to ionizing
radiation" evidence=IMP] [GO:0016180 "snRNA processing"
evidence=IDA] [GO:0032039 "integrator complex" evidence=IDA]
GO:GO:0006281 GO:GO:0010212 EMBL:CH471121 GO:GO:0031576
GO:GO:0032039 GO:GO:0016180 CTD:65123 eggNOG:NOG252340
HOVERGEN:HBG081800 KO:K13140 OMA:TWQLFLA OrthoDB:EOG483D3T
GO:GO:0070876 InterPro:IPR019333 Pfam:PF10189 EMBL:AL832133
EMBL:AK290025 EMBL:AK298746 EMBL:AK304874 EMBL:BX640786
EMBL:BX640950 EMBL:CR627233 EMBL:CR749212 EMBL:CR749376
EMBL:AL513523 EMBL:BC025254 EMBL:BC054513 EMBL:BC073985
EMBL:BC098431 EMBL:BC105092 EMBL:BC105094 EMBL:BC116458
EMBL:AK025572 EMBL:AK074979 EMBL:BK005722 IPI:IPI00418336
IPI:IPI00477093 IPI:IPI00645811 IPI:IPI00792312 RefSeq:NP_075391.3
UniGene:Hs.516522 IntAct:Q68E01 STRING:Q68E01 PhosphoSite:Q68E01
DMDM:74724494 PaxDb:Q68E01 PRIDE:Q68E01 Ensembl:ENST00000318967
Ensembl:ENST00000435409 Ensembl:ENST00000456435
Ensembl:ENST00000512605 GeneID:65123 KEGG:hsa:65123 UCSC:uc001fct.3
UCSC:uc001fcu.3 UCSC:uc001fcx.3 UCSC:uc010peb.2
GeneCards:GC01P153700 H-InvDB:HIX0001090 HGNC:HGNC:26153 MIM:611347
neXtProt:NX_Q68E01 PharmGKB:PA142672510 InParanoid:Q68E01
ChiTaRS:INTS3 GenomeRNAi:65123 NextBio:67332 Bgee:Q68E01
Genevestigator:Q68E01 GermOnline:ENSG00000143624 Uniprot:Q68E01
Length = 1043
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 155/401 (38%), Positives = 244/401 (60%)
Query: 57 VLCEPHFAKVHIKHLHAIVTDGYAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVS 116
+L EP A+ + L + DG D+ + QL+W+ +E++
Sbjct: 97 ILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSG 156
Query: 117 AVGFDGLLVSLLRQIVGG-DFSDGNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLR 175
+G DG+ ++ ++QI GG D + N+WL ++ + + + +L+ ++++ A+YT+LR
Sbjct: 157 VLGADGVCMTFMKQIAGGGDVTAKNIWLAESVLDILTEQREWVLKSS-ILIAMAVYTYLR 215
Query: 176 LLADHCRLLTNSKLDVLKCLEIDFCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIW 235
L+ DH ++L L+ E+DFC+ +LRE+F CL IGRDL+RLLQ++ +P F +W
Sbjct: 216 LIVDHHG---TAQLQALRQKEVDFCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLW 272
Query: 236 KDLVLNPSEFKTPGFSDISQLYHLRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQA 295
KD++ NP +P F+ I QL RTS ++ R+TP+MET+L F+ + V+ G QKRYQ
Sbjct: 273 KDIIHNPQAL-SPQFTGILQLLQSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQD 331
Query: 296 WFAKKFLFGPERETLIVDIIRFICCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETN 355
WF +++L P+ ++L D+IR+IC HPSNE++ SDI+PRWA+IGWLL +C N +N
Sbjct: 332 WFQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASN 391
Query: 356 AKLALFYDWLFFDESVDNIMNIEPAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKD 415
AKLALFYDWLFF D+IMNIEPA+L+M S+ + +T TLLDF+ ++ N+ +
Sbjct: 392 AKLALFYDWLFFSPDKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEG 451
Query: 416 VIARGVKSAFATLVHKGVVQSLDVLVSCKTLSPYLKERLRK 456
+ +GV S+ +V K V+ L L L L+ LR+
Sbjct: 452 HVRQGVFSSLNHIVEKRVLAHLAPLFDNPKLDKELRAMLRE 492
>ZFIN|ZDB-GENE-060503-634 [details] [associations]
symbol:ints3 "integrator complex subunit 3"
species:7955 "Danio rerio" [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=ISS] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
ZFIN:ZDB-GENE-060503-634 GO:GO:0006281 GO:GO:0010212 GO:GO:0031576
EMBL:BX465837 EMBL:BC091803 IPI:IPI00613293 RefSeq:NP_001038397.1
UniGene:Dr.15113 STRING:Q1LXC9 PRIDE:Q1LXC9
Ensembl:ENSDART00000067793 GeneID:560575 KEGG:dre:560575 CTD:65123
eggNOG:NOG252340 GeneTree:ENSGT00390000014184 HOGENOM:HOG000113080
HOVERGEN:HBG081800 InParanoid:Q1LXC9 KO:K13140 OMA:TWQLFLA
OrthoDB:EOG483D3T NextBio:20883502 ArrayExpress:Q1LXC9 Bgee:Q1LXC9
GO:GO:0070876 InterPro:IPR019333 Pfam:PF10189 Uniprot:Q1LXC9
Length = 1017
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 167/438 (38%), Positives = 259/438 (59%)
Query: 19 LSIRQAFDALESKLRPPFALTVPNPQEYMQLNRAILYGVLCEPHFAKVHIKHLHAIVTDG 78
LS R+A DAL + + PQ++ ++ + +L EP A+ + L + DG
Sbjct: 44 LSEREANDALTAHV-------CKGPQQHEEVCLGLFTLLLTEPPQAQRCYRDLTLVNRDG 96
Query: 79 YAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVSAVGFDGLLVSLLRQIVGGDFSD 138
D + QL+W+ +E++ +G DG+L++L++QI GGD S
Sbjct: 97 MNVVLMKINQILMEKFLKLQDVCRTQLVWLVRELVKSGVIGADGVLMTLMKQIAGGDISS 156
Query: 139 GNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRLLADHCRLLTNSKLDVLKCLEID 198
NLWL ++ + + + + +L+ LV S LYT+LRL+ DH T S L L+ E+D
Sbjct: 157 KNLWLAENVLDILVDQREWVLKSGMLVAMS-LYTYLRLIVDHG---TTSLLP-LRQREVD 211
Query: 199 FCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVLNPSEFKTPGFSDISQLYH 258
FC+ +LRE+F C IGRDL+RLLQ++ +P +W+DL+ +P +P F+ I QL
Sbjct: 212 FCIGLLRERFMECFIIGRDLVRLLQNVARIPEMELVWRDLLHSPQTL-SPQFTGILQLLT 270
Query: 259 LRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQAWFAKKFLFGPERETLIVDIIRFI 318
RTS ++ R+TP+MET+L F+ + V+ G QKRYQ WF +++L E ++L D+IR+I
Sbjct: 271 SRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTAESQSLRCDLIRYI 330
Query: 319 CCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETNAKLALFYDWLFFDESVDNIMNIE 378
C HPSNE++ SDI+PRWA+IGWLL +C N +NAKLALFYDWLFF+ D+IMNIE
Sbjct: 331 CGVVHPSNEVLSSDILPRWAIIGWLLTTCTSNVAASNAKLALFYDWLFFNPEKDSIMNIE 390
Query: 379 PAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKDVIARGVKSAFATLVHKGVVQSLD 438
PA+L+M S+ + +T TLLDF+ ++ ++ + + +GV ++ ++ K V+ L
Sbjct: 391 PAILVMHHSMKPHPAITATLLDFMCRIIPHFFPPLEGQVRQGVFNSLNFIMEKRVLAHLA 450
Query: 439 VLVSCKTLSPYLKERLRK 456
L L L+ LR+
Sbjct: 451 PLFDNPKLDRELRSMLRE 468
>FB|FBgn0262117 [details] [associations]
symbol:IntS3 "Integrator 3" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0032039 "integrator
complex" evidence=ISS] [GO:0016180 "snRNA processing" evidence=ISS]
EMBL:AE013599 GO:GO:0005794 CTD:65123 eggNOG:NOG252340
GeneTree:ENSGT00390000014184 KO:K13140 OMA:TWQLFLA
InterPro:IPR019333 Pfam:PF10189 EMBL:BT001469 EMBL:BT016083
EMBL:BT044308 RefSeq:NP_001036436.1 RefSeq:NP_001036437.1
UniGene:Dm.10741 STRING:Q7PLS8 PaxDb:Q7PLS8 PRIDE:Q7PLS8
EnsemblMetazoa:FBtr0111268 GeneID:3355010 KEGG:dme:Dmel_CG17665
UCSC:CG17665-RA FlyBase:FBgn0262117 InParanoid:Q7PLS7
OrthoDB:EOG4D51CM PhylomeDB:Q7PLS8 GenomeRNAi:3355010
NextBio:850096 Bgee:Q7PLS8 Uniprot:Q7PLS8
Length = 1068
Score = 734 (263.4 bits), Expect = 2.7e-72, P = 2.7e-72
Identities = 161/464 (34%), Positives = 253/464 (54%)
Query: 19 LSIRQAFDALESK-LRPPFALTVPNPQEYMQLNRAILYGVLCEPHFAKVHIKHLHAIVTD 77
++++ L K + + V +++ +++ LY +L +P A + + + D
Sbjct: 36 VTLQMQISGLSDKEMHDMLSQAVCKEKQHEEISIGFLYIMLTDPSMASKTYRDVTLVSRD 95
Query: 78 GYAXXXXXXXXXXXXXXXXXFDSVKNQLIWVTKEMINVSAVGFDGLLVSLLRQIVGGDFS 137
G + + QLIW+ +E + + + ++ + LRQ GGD S
Sbjct: 96 GMNGIVTNLTFLVAEKYTKLTEVARRQLIWLLREFVKHQVLSVENVIWNCLRQAGGGDVS 155
Query: 138 DGNLWLCFELVSLFLGKWDCLLEEEPLVLSSALYTFLRLLADHCRLLTNSKLDVLKCLEI 197
NL+L L+ +F+ ++ LE P ++ S +Y+F+RL+ DH N L L+ E+
Sbjct: 156 SRNLFLIESLLDIFI-EFRTWLETNPFLVQSTVYSFVRLIEDHA----NPALLSLRQKEV 210
Query: 198 DFCVKMLREQFQLCLKIGRDLIRLLQDLVHVPVFRAIWKDLVLNPSEFKTPGFSDISQLY 257
F + ++RE+F + +GRD +RLLQ++ +P F +W+D++ NP F+ I QL
Sbjct: 211 KFTISLIRERFHDIIPLGRDFVRLLQNVARIPEFEQLWRDILFNPKMLHQT-FNGIWQLL 269
Query: 258 HLRTSSRYFLTRITPEMETQLRFLLTHVKLGSQKRYQAWFAKKFLFGPERETLIVDIIRF 317
H+RTS R+ R+ PEME ++ FL + VK G+QKRYQ WF K+ PE +L D+IRF
Sbjct: 270 HIRTSRRFLQCRLLPEMERKISFLASSVKFGNQKRYQDWFQDKYFATPESHSLRSDLIRF 329
Query: 318 ICCGHHPSNEIIQSDIIPRWAVIGWLLKSCQKNHVETNAKLALFYDWLFFDESVDNIMNI 377
I HP+N+++ SDIIPRWA+IGWL+ SC NAKL+LFYDWLFFD + DNIMNI
Sbjct: 330 IINVIHPTNDMLCSDIIPRWAIIGWLISSCTNPIASANAKLSLFYDWLFFDPAKDNIMNI 389
Query: 378 EPAMLLMVCSIPRYIDMTHTLLDFLFLLVDNYDVDRKDVIARGVKSAFATLVHKGVVQSL 437
EP +L+M SI + ++ TLLDFL + N+ V +D I GV ++ ++ K V+ +L
Sbjct: 390 EPGILVMYHSIRNHPFVSSTLLDFLCRITKNFFVKHEDKIRIGVYNSLKLILEKQVIPNL 449
Query: 438 DVLVSCKTLSPYLKERLRKIQVLEVRVPNELH--LLHISQHSME 479
L L L+ +R E P H LL S H ++
Sbjct: 450 QPLFESPKLDRELRNLIRD-NFREFLSPPANHGQLLFTSLHPVQ 492
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 537 520 0.00089 119 3 11 22 0.46 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 626 (67 KB)
Total size of DFA: 321 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.89u 0.12s 45.01t Elapsed: 00:00:03
Total cpu time: 44.89u 0.12s 45.01t Elapsed: 00:00:03
Start: Mon May 20 20:41:22 2013 End: Mon May 20 20:41:25 2013