Query 009323
Match_columns 537
No_of_seqs 343 out of 3672
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 23:54:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009323.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009323hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jrx_A Acetyl-COA carboxylase 100.0 2E-87 6.9E-92 726.8 45.8 451 65-519 50-561 (587)
2 3glk_A Acetyl-COA carboxylase 100.0 9.7E-86 3.3E-90 711.8 41.3 446 65-514 34-540 (540)
3 3u9t_A MCC alpha, methylcroton 100.0 6.4E-86 2.2E-90 730.5 38.3 452 69-520 26-478 (675)
4 3n6r_A Propionyl-COA carboxyla 100.0 4.5E-86 1.5E-90 732.4 28.6 448 70-517 1-468 (681)
5 3ouz_A Biotin carboxylase; str 100.0 3E-82 1E-86 675.3 52.3 445 67-513 2-446 (446)
6 3hbl_A Pyruvate carboxylase; T 100.0 1.8E-79 6.2E-84 709.7 36.1 449 69-518 2-458 (1150)
7 3va7_A KLLA0E08119P; carboxyla 100.0 1.5E-76 5.2E-81 686.3 40.2 459 68-532 28-492 (1236)
8 2qf7_A Pyruvate carboxylase pr 100.0 3.2E-74 1.1E-78 667.5 40.7 449 70-518 13-476 (1165)
9 2vpq_A Acetyl-COA carboxylase; 100.0 1.4E-72 4.8E-77 601.7 50.1 447 71-517 1-448 (451)
10 1ulz_A Pyruvate carboxylase N- 100.0 2.1E-72 7.2E-77 600.3 48.5 447 70-517 1-447 (451)
11 2dzd_A Pyruvate carboxylase; b 100.0 2.5E-71 8.5E-76 593.6 49.8 449 66-515 1-457 (461)
12 1w96_A ACC, acetyl-coenzyme A 100.0 3.6E-71 1.2E-75 604.1 47.6 444 66-513 42-553 (554)
13 2w70_A Biotin carboxylase; lig 100.0 6.5E-71 2.2E-75 588.5 48.3 444 70-515 1-445 (449)
14 4dim_A Phosphoribosylglycinami 100.0 5.8E-54 2E-58 451.3 41.8 386 69-482 5-401 (403)
15 3vot_A L-amino acid ligase, BL 100.0 4.2E-50 1.4E-54 424.9 37.0 388 71-483 5-415 (425)
16 1a9x_A Carbamoyl phosphate syn 100.0 2.8E-49 9.7E-54 459.6 38.1 413 70-514 6-467 (1073)
17 1kjq_A GART 2, phosphoribosylg 100.0 1.5E-47 5E-52 400.8 42.9 379 71-483 11-391 (391)
18 4e4t_A Phosphoribosylaminoimid 100.0 1.2E-47 4E-52 404.3 39.8 376 69-481 33-416 (419)
19 2dwc_A PH0318, 433AA long hypo 100.0 2.8E-47 9.6E-52 404.2 42.5 388 71-486 19-418 (433)
20 4ffl_A PYLC; amino acid, biosy 100.0 2.3E-48 7.8E-53 403.1 33.1 355 71-481 1-357 (363)
21 3aw8_A PURK, phosphoribosylami 100.0 2.2E-46 7.5E-51 389.1 39.7 360 73-480 1-361 (369)
22 3k5i_A Phosphoribosyl-aminoimi 100.0 2E-46 6.9E-51 393.4 39.7 369 71-479 24-398 (403)
23 3ax6_A Phosphoribosylaminoimid 100.0 5.6E-45 1.9E-49 380.0 40.3 370 71-484 1-373 (380)
24 3q2o_A Phosphoribosylaminoimid 100.0 4.3E-44 1.5E-48 374.5 42.2 363 70-476 13-376 (389)
25 3orq_A N5-carboxyaminoimidazol 100.0 9.8E-44 3.4E-48 370.0 36.3 361 70-475 11-372 (377)
26 3eth_A Phosphoribosylaminoimid 100.0 1.3E-43 4.3E-48 364.4 35.4 336 71-479 1-339 (355)
27 2z04_A Phosphoribosylaminoimid 100.0 7.3E-44 2.5E-48 369.5 32.7 362 71-487 1-363 (365)
28 2yw2_A Phosphoribosylamine--gl 100.0 7.8E-44 2.7E-48 376.7 33.5 377 72-484 1-408 (424)
29 2ip4_A PURD, phosphoribosylami 100.0 1.6E-42 5.6E-47 365.8 39.5 377 72-484 1-401 (417)
30 3vmm_A Alanine-anticapsin liga 100.0 4.5E-43 1.6E-47 374.4 34.7 376 95-483 52-468 (474)
31 2qk4_A Trifunctional purine bi 100.0 1.7E-43 5.7E-48 377.2 30.7 390 67-484 20-437 (452)
32 1vkz_A Phosphoribosylamine--gl 100.0 1.4E-42 4.9E-47 365.5 31.8 371 69-484 13-404 (412)
33 3lp8_A Phosphoribosylamine-gly 100.0 4E-41 1.4E-45 357.1 39.1 386 70-484 20-431 (442)
34 2yrx_A Phosphoribosylglycinami 100.0 3.1E-41 1.1E-45 359.5 38.2 388 64-484 14-427 (451)
35 3mjf_A Phosphoribosylamine--gl 100.0 1.4E-40 4.6E-45 352.0 39.3 391 71-484 3-416 (431)
36 2xcl_A Phosphoribosylamine--gl 100.0 3E-40 1E-44 349.0 37.3 380 72-484 1-406 (422)
37 1a9x_A Carbamoyl phosphate syn 100.0 1.9E-38 6.4E-43 368.9 39.5 362 70-477 558-936 (1073)
38 2pn1_A Carbamoylphosphate synt 100.0 4E-37 1.4E-41 314.4 28.3 294 69-392 2-301 (331)
39 4fu0_A D-alanine--D-alanine li 100.0 1.9E-37 6.6E-42 320.2 19.8 301 71-383 3-342 (357)
40 4eg0_A D-alanine--D-alanine li 100.0 4E-35 1.4E-39 298.1 26.1 277 69-385 11-311 (317)
41 1ehi_A LMDDL2, D-alanine:D-lac 100.0 2.8E-34 9.7E-39 298.6 32.0 302 71-387 3-353 (377)
42 3e5n_A D-alanine-D-alanine lig 100.0 1.8E-35 6.3E-40 307.9 22.3 306 66-384 17-365 (386)
43 3i12_A D-alanine-D-alanine lig 100.0 1.6E-34 5.5E-39 299.1 27.8 301 71-384 3-346 (364)
44 3k3p_A D-alanine--D-alanine li 100.0 1.2E-34 4.2E-39 300.9 26.0 310 60-384 24-367 (383)
45 2i87_A D-alanine-D-alanine lig 100.0 1.1E-34 3.9E-39 300.4 24.7 299 71-383 3-336 (364)
46 1iow_A DD-ligase, DDLB, D-ALA\ 100.0 7.1E-34 2.4E-38 286.7 28.3 274 70-386 1-303 (306)
47 3tqt_A D-alanine--D-alanine li 100.0 3E-33 1E-37 289.5 26.6 300 72-384 5-347 (372)
48 3r5x_A D-alanine--D-alanine li 100.0 2.5E-33 8.4E-38 283.3 23.7 271 72-385 4-295 (307)
49 1e4e_A Vancomycin/teicoplanin 100.0 1.6E-33 5.4E-38 289.5 22.2 297 71-385 3-337 (343)
50 3lwb_A D-alanine--D-alanine li 100.0 1.4E-33 4.8E-38 292.5 20.8 233 143-386 109-366 (373)
51 3se7_A VANA; alpha-beta struct 100.0 2.5E-33 8.4E-38 288.3 20.1 298 72-384 4-336 (346)
52 2fb9_A D-alanine:D-alanine lig 100.0 9.6E-33 3.3E-37 281.1 22.1 289 70-384 2-316 (322)
53 2pvp_A D-alanine-D-alanine lig 100.0 2.2E-31 7.5E-36 275.3 20.1 231 143-390 107-349 (367)
54 1uc8_A LYSX, lysine biosynthes 100.0 1E-30 3.4E-35 260.0 22.6 272 74-388 2-278 (280)
55 2r85_A PURP protein PF1517; AT 100.0 5.8E-29 2E-33 253.8 27.6 264 71-365 2-291 (334)
56 2r7k_A 5-formaminoimidazole-4- 100.0 1E-28 3.5E-33 253.5 27.9 267 72-369 19-322 (361)
57 2pbz_A Hypothetical protein; N 99.9 3.4E-28 1.2E-32 245.0 11.3 251 71-365 2-272 (320)
58 3df7_A Putative ATP-grAsp supe 99.9 8.2E-26 2.8E-30 227.9 20.2 209 133-384 61-271 (305)
59 1gsa_A Glutathione synthetase; 99.9 3.9E-23 1.3E-27 208.6 19.5 287 72-387 2-311 (316)
60 1z2n_X Inositol 1,3,4-trisphos 99.9 1.1E-21 3.8E-26 199.3 18.1 240 71-365 11-302 (324)
61 3ln7_A Glutathione biosynthesi 99.9 1.1E-21 3.8E-26 217.7 11.4 240 130-387 433-754 (757)
62 1wr2_A Hypothetical protein PH 99.8 6.3E-20 2.2E-24 178.2 13.8 177 182-363 19-218 (238)
63 3ln6_A Glutathione biosynthesi 99.8 5.5E-20 1.9E-24 204.7 12.7 242 131-386 429-747 (750)
64 1i7n_A Synapsin II; synapse, p 99.8 1.8E-18 6.2E-23 172.8 19.9 219 143-385 68-303 (309)
65 2p0a_A Synapsin-3, synapsin II 99.8 2.5E-18 8.6E-23 173.8 20.4 221 143-387 85-322 (344)
66 1pk8_A RAT synapsin I; ATP bin 99.8 3.5E-18 1.2E-22 175.5 21.1 219 143-385 180-415 (422)
67 2q7d_A Inositol-tetrakisphosph 99.7 7.3E-17 2.5E-21 164.7 17.6 227 82-362 34-311 (346)
68 2cqy_A Propionyl-COA carboxyla 99.7 6.2E-18 2.1E-22 143.0 3.7 104 180-283 4-107 (108)
69 2fp4_B Succinyl-COA ligase [GD 99.5 2.2E-14 7.5E-19 148.3 9.6 169 184-363 4-210 (395)
70 3t7a_A Inositol pyrophosphate 99.5 9.4E-15 3.2E-19 142.2 5.9 199 144-365 58-293 (330)
71 2nu8_B SCS-beta, succinyl-COA 99.5 3.5E-14 1.2E-18 146.7 9.2 169 184-363 4-203 (388)
72 3ufx_B Succinyl-COA synthetase 99.3 6.1E-12 2.1E-16 130.2 12.4 109 184-294 4-118 (397)
73 3tig_A TTL protein; ATP-grAsp, 98.0 0.00015 5E-09 73.8 16.9 157 221-391 147-363 (380)
74 3mwd_A ATP-citrate synthase; A 97.4 0.00016 5.6E-09 74.8 6.1 108 185-294 8-135 (425)
75 3pff_A ATP-citrate synthase; p 97.2 0.0003 1E-08 78.3 5.7 108 185-294 8-135 (829)
76 3ic5_A Putative saccharopine d 96.6 0.0076 2.6E-07 49.9 8.4 94 70-173 4-98 (118)
77 3i6i_A Putative leucoanthocyan 96.4 0.042 1.4E-06 55.0 14.5 93 71-170 10-113 (346)
78 3llv_A Exopolyphosphatase-rela 96.2 0.0059 2E-07 52.8 5.8 91 70-168 5-95 (141)
79 3fwz_A Inner membrane protein 96.1 0.0056 1.9E-07 53.1 4.9 117 69-199 5-121 (140)
80 2hmt_A YUAA protein; RCK, KTN, 95.7 0.019 6.6E-07 49.2 6.8 76 70-153 5-80 (144)
81 1hdo_A Biliverdin IX beta redu 95.5 0.15 5.2E-06 46.2 12.7 73 72-153 4-77 (206)
82 2r6j_A Eugenol synthase 1; phe 95.4 0.14 4.8E-06 50.3 12.6 121 70-199 10-150 (318)
83 3r6d_A NAD-dependent epimerase 95.3 0.095 3.2E-06 48.6 10.6 92 69-169 3-100 (221)
84 2duw_A Putative COA-binding pr 95.1 0.17 5.9E-06 44.0 10.8 102 71-180 13-129 (145)
85 3ff4_A Uncharacterized protein 95.0 0.17 5.8E-06 42.7 10.2 98 71-176 4-113 (122)
86 3nkl_A UDP-D-quinovosamine 4-d 94.9 0.11 3.7E-06 44.6 9.0 95 71-177 4-102 (141)
87 2g1u_A Hypothetical protein TM 94.8 0.14 4.6E-06 44.9 9.5 35 71-105 19-53 (155)
88 1y81_A Conserved hypothetical 94.7 0.22 7.5E-06 42.9 10.5 102 71-180 14-128 (138)
89 2d59_A Hypothetical protein PH 94.7 0.24 8.3E-06 43.0 10.7 101 72-180 23-136 (144)
90 3qvo_A NMRA family protein; st 94.6 0.11 3.9E-06 48.8 9.1 78 66-152 18-97 (236)
91 3slg_A PBGP3 protein; structur 94.4 0.13 4.6E-06 51.7 9.7 76 66-150 19-98 (372)
92 1qyc_A Phenylcoumaran benzylic 94.2 0.28 9.7E-06 47.7 11.3 91 71-170 4-107 (308)
93 3c1o_A Eugenol synthase; pheny 94.2 0.73 2.5E-05 45.0 14.5 119 71-199 4-148 (321)
94 3l9w_A Glutathione-regulated p 94.2 0.023 7.9E-07 58.8 3.4 114 72-199 5-118 (413)
95 1iuk_A Hypothetical protein TT 94.1 0.16 5.3E-06 44.0 8.0 103 71-181 13-130 (140)
96 1t2a_A GDP-mannose 4,6 dehydra 93.9 0.25 8.4E-06 49.8 10.3 83 63-152 16-111 (375)
97 3m2p_A UDP-N-acetylglucosamine 93.8 0.47 1.6E-05 46.3 11.9 70 70-152 1-71 (311)
98 1id1_A Putative potassium chan 93.8 0.15 5E-06 44.5 7.3 90 71-167 3-95 (153)
99 3l4b_C TRKA K+ channel protien 93.7 0.097 3.3E-06 48.7 6.4 113 72-198 1-114 (218)
100 2gas_A Isoflavone reductase; N 93.7 0.4 1.4E-05 46.5 11.2 91 71-170 2-106 (307)
101 1qyd_A Pinoresinol-lariciresin 93.4 0.59 2E-05 45.5 11.9 91 71-170 4-110 (313)
102 2c20_A UDP-glucose 4-epimerase 92.9 0.36 1.2E-05 47.4 9.4 73 71-152 1-76 (330)
103 1p9l_A Dihydrodipicolinate red 92.8 0.93 3.2E-05 43.1 11.7 92 73-170 2-98 (245)
104 4egb_A DTDP-glucose 4,6-dehydr 92.7 0.94 3.2E-05 44.7 12.3 76 70-152 23-107 (346)
105 2yy7_A L-threonine dehydrogena 92.7 0.29 9.8E-06 47.7 8.3 74 70-152 1-77 (312)
106 2wm3_A NMRA-like family domain 92.3 0.8 2.7E-05 44.3 11.1 73 71-152 5-81 (299)
107 3dhn_A NAD-dependent epimerase 92.3 0.35 1.2E-05 44.7 8.0 72 71-152 4-76 (227)
108 3c85_A Putative glutathione-re 92.2 0.16 5.4E-06 45.7 5.3 34 71-104 39-73 (183)
109 1n7h_A GDP-D-mannose-4,6-dehyd 92.0 0.61 2.1E-05 46.9 10.1 76 70-152 27-115 (381)
110 3sc6_A DTDP-4-dehydrorhamnose 92.0 0.35 1.2E-05 46.5 8.0 59 72-152 6-65 (287)
111 2c5a_A GDP-mannose-3', 5'-epim 92.0 0.65 2.2E-05 46.8 10.3 73 71-152 29-102 (379)
112 3ius_A Uncharacterized conserv 92.0 0.25 8.6E-06 47.5 6.9 36 69-104 3-38 (286)
113 1rpn_A GDP-mannose 4,6-dehydra 91.9 0.61 2.1E-05 45.8 9.8 78 68-152 11-95 (335)
114 3dfz_A SIRC, precorrin-2 dehyd 91.9 0.19 6.6E-06 47.1 5.6 32 71-102 31-62 (223)
115 1lss_A TRK system potassium up 91.8 0.26 8.9E-06 41.6 6.0 32 72-103 5-36 (140)
116 3s2u_A UDP-N-acetylglucosamine 91.8 0.66 2.2E-05 46.7 10.0 101 70-172 1-119 (365)
117 3gpi_A NAD-dependent epimerase 91.8 0.17 5.7E-06 48.9 5.3 35 71-105 3-37 (286)
118 2io8_A Bifunctional glutathion 91.8 0.4 1.4E-05 51.8 8.7 120 159-297 474-599 (619)
119 4ina_A Saccharopine dehydrogen 91.7 0.45 1.5E-05 48.9 8.7 124 71-202 1-139 (405)
120 3e48_A Putative nucleoside-dip 91.5 1 3.5E-05 43.2 10.7 72 72-152 1-74 (289)
121 3enk_A UDP-glucose 4-epimerase 91.5 0.73 2.5E-05 45.4 9.8 75 71-152 5-87 (341)
122 3o9z_A Lipopolysaccaride biosy 91.4 1.5 5.2E-05 43.1 12.0 93 71-173 3-101 (312)
123 1ek6_A UDP-galactose 4-epimera 91.4 0.44 1.5E-05 47.2 8.1 76 70-152 1-90 (348)
124 2jl1_A Triphenylmethane reduct 91.4 0.41 1.4E-05 45.9 7.7 72 72-152 1-75 (287)
125 2q1w_A Putative nucleotide sug 91.1 0.99 3.4E-05 44.5 10.4 75 71-152 21-98 (333)
126 2x4g_A Nucleoside-diphosphate- 90.8 0.81 2.8E-05 45.0 9.3 71 72-151 14-85 (342)
127 4id9_A Short-chain dehydrogena 90.8 0.64 2.2E-05 46.0 8.6 67 70-151 18-85 (347)
128 3ruf_A WBGU; rossmann fold, UD 90.5 0.57 1.9E-05 46.5 7.9 73 71-152 25-109 (351)
129 2ydy_A Methionine adenosyltran 90.4 0.32 1.1E-05 47.5 5.9 68 70-152 1-69 (315)
130 3rft_A Uronate dehydrogenase; 90.4 0.47 1.6E-05 45.4 6.9 71 70-152 2-73 (267)
131 3n6x_A Putative glutathionylsp 90.3 0.29 9.9E-06 51.0 5.6 71 195-274 339-411 (474)
132 3orf_A Dihydropteridine reduct 90.3 1.3 4.3E-05 41.9 9.8 73 67-152 18-96 (251)
133 3dqp_A Oxidoreductase YLBE; al 90.2 0.91 3.1E-05 41.7 8.6 69 73-153 2-73 (219)
134 2axq_A Saccharopine dehydrogen 90.2 0.51 1.8E-05 49.4 7.5 121 65-202 17-142 (467)
135 2d1y_A Hypothetical protein TT 90.1 1 3.5E-05 42.6 9.1 77 69-152 4-86 (256)
136 3ijr_A Oxidoreductase, short c 90.0 1.1 3.6E-05 43.6 9.3 35 70-104 46-81 (291)
137 4ea9_A Perosamine N-acetyltran 90.0 1.2 4.1E-05 41.2 9.2 33 69-101 10-42 (220)
138 2pk3_A GDP-6-deoxy-D-LYXO-4-he 89.8 1.2 4.2E-05 43.3 9.6 72 70-152 11-83 (321)
139 1uay_A Type II 3-hydroxyacyl-C 89.7 1.3 4.4E-05 41.1 9.3 70 70-152 1-75 (242)
140 1rkx_A CDP-glucose-4,6-dehydra 89.4 1.3 4.6E-05 43.8 9.7 75 71-152 9-89 (357)
141 3abi_A Putative uncharacterize 89.4 0.62 2.1E-05 47.0 7.2 115 72-202 17-131 (365)
142 2pzm_A Putative nucleotide sug 89.1 1.5 5E-05 43.1 9.6 75 71-152 20-97 (330)
143 3f8d_A Thioredoxin reductase ( 89.1 0.77 2.6E-05 44.5 7.4 35 69-103 13-47 (323)
144 4g65_A TRK system potassium up 89.0 0.24 8.1E-06 51.9 3.8 75 72-153 4-78 (461)
145 3iup_A Putative NADPH:quinone 89.0 2.2 7.6E-05 43.0 11.1 78 70-153 170-250 (379)
146 1orr_A CDP-tyvelose-2-epimeras 88.9 1.4 4.6E-05 43.4 9.2 75 71-152 1-82 (347)
147 3pdi_B Nitrogenase MOFE cofact 88.9 1.3 4.3E-05 46.3 9.2 85 71-172 313-397 (458)
148 3ec7_A Putative dehydrogenase; 88.7 0.6 2.1E-05 46.9 6.5 150 67-228 19-174 (357)
149 2nm0_A Probable 3-oxacyl-(acyl 88.5 2.3 8E-05 40.2 10.3 71 70-152 20-96 (253)
150 3sxp_A ADP-L-glycero-D-mannohe 88.3 1.9 6.5E-05 42.9 9.9 75 70-152 9-99 (362)
151 1e6u_A GDP-fucose synthetase; 88.2 0.82 2.8E-05 44.6 7.0 62 70-152 2-64 (321)
152 3k31_A Enoyl-(acyl-carrier-pro 88.2 0.99 3.4E-05 43.9 7.5 33 71-103 30-65 (296)
153 3oa2_A WBPB; oxidoreductase, s 88.1 3.8 0.00013 40.3 11.8 93 71-173 3-102 (318)
154 2z1m_A GDP-D-mannose dehydrata 88.0 1.9 6.5E-05 42.3 9.6 77 71-152 3-84 (345)
155 3qy9_A DHPR, dihydrodipicolina 87.9 2.1 7.2E-05 40.5 9.3 31 71-101 3-33 (243)
156 2p5y_A UDP-glucose 4-epimerase 87.6 1.6 5.4E-05 42.3 8.6 72 72-152 1-75 (311)
157 2we8_A Xanthine dehydrogenase; 87.5 3.5 0.00012 41.8 11.3 36 70-105 203-238 (386)
158 2aef_A Calcium-gated potassium 87.4 0.3 1E-05 45.8 3.1 112 71-198 9-120 (234)
159 3p19_A BFPVVD8, putative blue 87.3 0.91 3.1E-05 43.4 6.6 34 70-103 15-49 (266)
160 1sb8_A WBPP; epimerase, 4-epim 87.3 1.7 5.8E-05 43.0 8.8 73 71-152 27-111 (352)
161 3gem_A Short chain dehydrogena 87.2 1.2 4.1E-05 42.5 7.2 75 71-152 27-108 (260)
162 3eag_A UDP-N-acetylmuramate:L- 87.1 3.6 0.00012 40.6 11.0 93 71-177 4-98 (326)
163 3ay3_A NAD-dependent epimerase 87.1 0.53 1.8E-05 44.8 4.7 71 70-152 1-72 (267)
164 1jw9_B Molybdopterin biosynthe 87.0 1.2 4.2E-05 42.2 7.2 31 71-101 31-62 (249)
165 2dtx_A Glucose 1-dehydrogenase 86.8 3.9 0.00013 38.8 10.7 70 71-152 8-83 (264)
166 3ged_A Short-chain dehydrogena 86.7 0.78 2.7E-05 43.7 5.5 35 70-104 1-36 (247)
167 2fwm_X 2,3-dihydro-2,3-dihydro 86.4 4.7 0.00016 37.7 11.0 71 71-152 7-83 (250)
168 3dii_A Short-chain dehydrogena 86.2 0.85 2.9E-05 43.0 5.5 76 70-152 1-84 (247)
169 1yo6_A Putative carbonyl reduc 86.0 2 6.9E-05 39.9 8.1 76 71-153 3-91 (250)
170 2ag5_A DHRS6, dehydrogenase/re 85.7 2.3 7.7E-05 39.9 8.3 76 70-152 5-83 (246)
171 2dkn_A 3-alpha-hydroxysteroid 85.7 1.4 4.9E-05 41.1 6.9 69 71-153 1-72 (255)
172 2rhc_B Actinorhodin polyketide 85.6 2 7E-05 41.1 8.1 38 66-103 17-55 (277)
173 3q2i_A Dehydrogenase; rossmann 85.5 1.1 3.6E-05 44.9 6.2 143 71-227 13-160 (354)
174 3kkj_A Amine oxidase, flavin-c 85.5 0.85 2.9E-05 42.1 5.1 33 70-102 1-33 (336)
175 4hv4_A UDP-N-acetylmuramate--L 85.4 2.6 8.8E-05 44.4 9.3 92 71-178 22-114 (494)
176 3keo_A Redox-sensing transcrip 85.4 0.65 2.2E-05 43.1 4.1 89 71-172 84-176 (212)
177 1pjq_A CYSG, siroheme synthase 85.3 1.5 5.2E-05 45.7 7.4 86 71-171 12-100 (457)
178 1gy8_A UDP-galactose 4-epimera 85.3 3.6 0.00012 41.3 10.1 74 72-152 3-102 (397)
179 2bka_A CC3, TAT-interacting pr 85.3 1.2 4E-05 41.5 6.0 73 71-152 18-93 (242)
180 2ehd_A Oxidoreductase, oxidore 85.1 1.5 5E-05 40.7 6.6 76 70-152 4-87 (234)
181 2cfc_A 2-(R)-hydroxypropyl-COM 85.1 1.5 5.3E-05 40.9 6.8 34 70-103 1-35 (250)
182 4b79_A PA4098, probable short- 85.1 5 0.00017 37.9 10.3 75 71-152 11-87 (242)
183 3vtz_A Glucose 1-dehydrogenase 85.1 4.6 0.00016 38.5 10.3 71 71-152 14-90 (269)
184 1xq6_A Unknown protein; struct 85.1 1.5 5E-05 40.8 6.6 73 70-152 3-78 (253)
185 1vl0_A DTDP-4-dehydrorhamnose 85.1 1.5 5E-05 42.1 6.8 62 69-152 10-72 (292)
186 1uzm_A 3-oxoacyl-[acyl-carrier 85.1 3.6 0.00012 38.5 9.4 71 70-152 14-90 (247)
187 2q1s_A Putative nucleotide sug 85.1 2.1 7.1E-05 43.0 8.2 75 71-152 32-108 (377)
188 4gx0_A TRKA domain protein; me 85.0 1.5 5.3E-05 46.8 7.5 110 72-199 349-458 (565)
189 3un1_A Probable oxidoreductase 85.0 3 0.0001 39.6 8.8 72 71-152 28-105 (260)
190 1lnq_A MTHK channels, potassiu 84.9 0.16 5.3E-06 50.8 -0.4 112 71-198 115-226 (336)
191 1udb_A Epimerase, UDP-galactos 84.9 4.5 0.00015 39.5 10.4 73 73-152 2-82 (338)
192 3l6e_A Oxidoreductase, short-c 84.8 1.4 4.8E-05 41.2 6.3 34 71-104 3-37 (235)
193 1e3j_A NADP(H)-dependent ketos 84.6 1.6 5.5E-05 43.5 7.0 79 70-153 168-250 (352)
194 2pd4_A Enoyl-[acyl-carrier-pro 84.3 1.8 6.2E-05 41.4 7.0 35 70-104 5-42 (275)
195 2a4k_A 3-oxoacyl-[acyl carrier 84.3 2 6.9E-05 40.8 7.3 35 69-103 4-39 (263)
196 2ggs_A 273AA long hypothetical 84.3 6.3 0.00022 37.0 10.9 65 73-153 2-67 (273)
197 3rih_A Short chain dehydrogena 84.1 2.8 9.7E-05 40.6 8.4 40 66-105 36-76 (293)
198 1qsg_A Enoyl-[acyl-carrier-pro 84.1 1.3 4.5E-05 42.1 5.9 34 71-104 9-45 (265)
199 3upl_A Oxidoreductase; rossman 84.0 2.5 8.4E-05 43.8 8.1 148 72-226 24-188 (446)
200 2x5o_A UDP-N-acetylmuramoylala 84.0 10 0.00035 39.0 13.0 88 71-173 5-93 (439)
201 3oec_A Carveol dehydrogenase ( 83.9 5.3 0.00018 39.1 10.4 39 65-103 40-79 (317)
202 1db3_A GDP-mannose 4,6-dehydra 83.9 3.3 0.00011 41.1 9.1 77 71-152 1-87 (372)
203 3db2_A Putative NADPH-dependen 83.7 1.5 5E-05 43.9 6.2 90 70-172 4-94 (354)
204 2o23_A HADH2 protein; HSD17B10 83.6 4.3 0.00015 38.1 9.3 75 71-152 12-95 (265)
205 3m6i_A L-arabinitol 4-dehydrog 83.5 0.49 1.7E-05 47.6 2.6 78 70-152 179-261 (363)
206 3rkr_A Short chain oxidoreduct 83.4 1.8 6.2E-05 41.0 6.5 40 65-104 23-63 (262)
207 3tqq_A Methionyl-tRNA formyltr 83.3 2.2 7.4E-05 42.1 7.1 38 70-107 1-38 (314)
208 4b8w_A GDP-L-fucose synthase; 83.3 4.3 0.00015 38.9 9.3 66 69-152 4-70 (319)
209 3nrc_A Enoyl-[acyl-carrier-pro 83.3 3.4 0.00012 39.6 8.5 80 66-153 21-113 (280)
210 1ff9_A Saccharopine reductase; 83.3 2.3 8E-05 44.1 7.7 115 71-202 3-122 (450)
211 3tpc_A Short chain alcohol deh 83.3 7.1 0.00024 36.6 10.7 76 71-153 7-91 (257)
212 1kyq_A Met8P, siroheme biosynt 83.2 1 3.4E-05 43.6 4.5 34 71-104 13-46 (274)
213 2xdq_B Light-independent proto 83.2 4.1 0.00014 43.0 9.8 86 71-172 303-394 (511)
214 3gvc_A Oxidoreductase, probabl 83.2 1.6 5.6E-05 41.9 6.1 75 71-152 29-112 (277)
215 3m1a_A Putative dehydrogenase; 83.1 3 0.0001 39.8 8.0 75 71-152 5-88 (281)
216 1oi7_A Succinyl-COA synthetase 83.0 4.2 0.00014 39.4 9.0 108 71-199 7-118 (288)
217 3afn_B Carbonyl reductase; alp 83.0 3.1 0.00011 38.9 8.0 33 71-103 7-40 (258)
218 2dc1_A L-aspartate dehydrogena 83.0 4.4 0.00015 37.8 9.0 103 73-198 2-104 (236)
219 4ew6_A D-galactose-1-dehydroge 83.0 7.3 0.00025 38.4 11.0 87 68-173 22-110 (330)
220 2hrz_A AGR_C_4963P, nucleoside 82.9 4.2 0.00014 39.8 9.3 73 70-152 13-95 (342)
221 3d7l_A LIN1944 protein; APC893 82.9 3 0.0001 37.5 7.5 61 73-152 5-67 (202)
222 3pxx_A Carveol dehydrogenase; 82.8 8.8 0.0003 36.5 11.3 38 66-103 5-43 (287)
223 1spx_A Short-chain reductase f 82.7 1.7 5.9E-05 41.5 6.1 35 69-103 4-39 (278)
224 2dq4_A L-threonine 3-dehydroge 82.6 1.3 4.6E-05 43.9 5.4 75 70-152 164-240 (343)
225 3h2s_A Putative NADH-flavin re 82.6 1.2 4.1E-05 40.8 4.7 32 72-103 1-33 (224)
226 3fbs_A Oxidoreductase; structu 82.5 1.5 5.3E-05 41.8 5.7 33 70-102 1-33 (297)
227 1geg_A Acetoin reductase; SDR 82.5 2.2 7.4E-05 40.3 6.6 34 70-103 1-35 (256)
228 3ajr_A NDP-sugar epimerase; L- 82.4 3.1 0.00011 40.2 8.0 68 73-152 1-71 (317)
229 4e6p_A Probable sorbitol dehyd 82.3 2.7 9.4E-05 39.7 7.3 75 71-152 8-91 (259)
230 3gms_A Putative NADPH:quinone 82.1 1.9 6.6E-05 42.7 6.3 78 69-152 143-222 (340)
231 1ooe_A Dihydropteridine reduct 82.1 2.6 8.9E-05 39.1 7.0 35 71-105 3-38 (236)
232 3r1i_A Short-chain type dehydr 81.9 5.2 0.00018 38.2 9.2 34 71-104 32-66 (276)
233 1yqd_A Sinapyl alcohol dehydro 81.9 1.3 4.6E-05 44.4 5.1 73 70-153 187-261 (366)
234 3uog_A Alcohol dehydrogenase; 81.9 1.6 5.3E-05 43.9 5.6 78 69-152 188-266 (363)
235 3u7q_A Nitrogenase molybdenum- 81.9 2.7 9.4E-05 44.1 7.6 88 71-172 348-439 (492)
236 2z2v_A Hypothetical protein PH 81.8 1.8 6.2E-05 43.6 6.1 132 71-221 16-151 (365)
237 3ip3_A Oxidoreductase, putativ 81.8 0.55 1.9E-05 46.7 2.2 148 70-228 1-155 (337)
238 3ihm_A Styrene monooxygenase A 81.7 1.3 4.4E-05 45.6 5.0 35 69-103 20-54 (430)
239 4iiu_A 3-oxoacyl-[acyl-carrier 81.7 2.6 9E-05 40.0 7.0 35 67-101 22-57 (267)
240 1kew_A RMLB;, DTDP-D-glucose 4 81.7 5.7 0.00019 39.2 9.7 73 73-152 2-82 (361)
241 3rd5_A Mypaa.01249.C; ssgcid, 81.6 2.3 7.8E-05 41.0 6.6 77 69-152 14-95 (291)
242 1zud_1 Adenylyltransferase THI 81.4 15 0.00053 34.5 12.2 116 71-201 28-148 (251)
243 3ip1_A Alcohol dehydrogenase, 81.4 1.5 5E-05 44.8 5.3 79 69-153 212-292 (404)
244 1n2s_A DTDP-4-, DTDP-glucose o 81.2 3.2 0.00011 39.8 7.5 62 72-152 1-63 (299)
245 3auf_A Glycinamide ribonucleot 81.2 3.7 0.00013 38.4 7.6 75 71-150 22-108 (229)
246 3ftp_A 3-oxoacyl-[acyl-carrier 81.2 2.6 8.8E-05 40.3 6.7 33 71-103 28-61 (270)
247 4hb9_A Similarities with proba 81.2 1.6 5.6E-05 43.8 5.5 32 72-103 2-33 (412)
248 3ak4_A NADH-dependent quinucli 81.1 4 0.00014 38.5 8.0 75 71-152 12-95 (263)
249 3e82_A Putative oxidoreductase 81.1 2.7 9.1E-05 42.2 7.0 143 71-229 7-154 (364)
250 2ekp_A 2-deoxy-D-gluconate 3-d 81.1 6.5 0.00022 36.4 9.4 75 71-152 2-79 (239)
251 2p91_A Enoyl-[acyl-carrier-pro 81.1 2.6 8.8E-05 40.5 6.7 34 71-104 21-57 (285)
252 3vps_A TUNA, NAD-dependent epi 81.1 1.7 5.9E-05 42.0 5.5 35 70-104 6-41 (321)
253 1xkq_A Short-chain reductase f 81.0 2.3 7.9E-05 40.7 6.3 35 69-103 4-39 (280)
254 1oc2_A DTDP-glucose 4,6-dehydr 81.0 7.1 0.00024 38.2 10.1 73 71-152 4-84 (348)
255 1yde_A Retinal dehydrogenase/r 81.0 3 0.0001 39.8 7.1 34 70-103 8-42 (270)
256 3s55_A Putative short-chain de 81.0 11 0.00037 35.8 11.2 38 66-103 5-43 (281)
257 2v6g_A Progesterone 5-beta-red 81.0 2.7 9.4E-05 41.5 7.1 73 72-152 2-81 (364)
258 4b4o_A Epimerase family protei 81.0 1.9 6.4E-05 41.6 5.7 33 72-104 1-34 (298)
259 1z45_A GAL10 bifunctional prot 80.9 5.7 0.00019 43.5 10.2 75 71-152 11-93 (699)
260 1xgk_A Nitrogen metabolite rep 80.9 5.3 0.00018 39.7 9.1 71 71-150 5-80 (352)
261 3d3w_A L-xylulose reductase; u 80.8 3 0.0001 38.7 6.9 75 71-152 7-85 (244)
262 1vl8_A Gluconate 5-dehydrogena 80.7 3.1 0.00011 39.5 7.1 33 71-103 21-54 (267)
263 1f0k_A MURG, UDP-N-acetylgluco 80.7 9.3 0.00032 37.4 10.9 99 72-172 7-123 (364)
264 2zcu_A Uncharacterized oxidore 80.6 3.1 0.00011 39.5 7.1 70 73-151 1-73 (286)
265 3v2h_A D-beta-hydroxybutyrate 80.6 4.1 0.00014 39.1 8.0 38 65-102 19-57 (281)
266 3dfu_A Uncharacterized protein 80.5 2 6.7E-05 40.4 5.4 88 71-173 6-95 (232)
267 3o38_A Short chain dehydrogena 80.5 3.1 0.00011 39.4 6.9 36 69-104 20-57 (266)
268 2ywr_A Phosphoribosylglycinami 80.4 2.9 9.8E-05 38.8 6.5 73 72-149 2-86 (216)
269 2hun_A 336AA long hypothetical 80.4 6.6 0.00023 38.2 9.6 72 72-152 4-84 (336)
270 1sny_A Sniffer CG10964-PA; alp 80.3 3.7 0.00013 38.7 7.4 35 71-105 21-59 (267)
271 1pl8_A Human sorbitol dehydrog 80.3 3.1 0.00011 41.4 7.2 80 70-153 171-252 (356)
272 2p2s_A Putative oxidoreductase 80.1 4.6 0.00016 39.8 8.4 145 71-228 4-153 (336)
273 4dyv_A Short-chain dehydrogena 80.1 2.6 8.8E-05 40.4 6.3 80 66-152 23-111 (272)
274 3on5_A BH1974 protein; structu 80.1 3 0.0001 41.8 6.9 49 71-119 199-248 (362)
275 3ijp_A DHPR, dihydrodipicolina 80.1 2.5 8.5E-05 41.1 6.1 32 70-101 20-53 (288)
276 3i4f_A 3-oxoacyl-[acyl-carrier 80.1 3.1 0.0001 39.3 6.8 34 70-103 6-40 (264)
277 2xdo_A TETX2 protein; tetracyc 80.0 1.9 6.6E-05 43.6 5.6 40 65-104 20-59 (398)
278 4had_A Probable oxidoreductase 80.0 4.2 0.00014 40.3 8.1 91 71-173 23-115 (350)
279 1dhr_A Dihydropteridine reduct 80.0 4.1 0.00014 37.9 7.6 35 71-105 7-42 (241)
280 3ehe_A UDP-glucose 4-epimerase 80.0 1.5 5.2E-05 42.5 4.7 30 71-101 1-31 (313)
281 1xg5_A ARPG836; short chain de 80.0 3.9 0.00013 39.0 7.5 34 70-103 31-65 (279)
282 3mz0_A Inositol 2-dehydrogenas 80.0 2.1 7.1E-05 42.6 5.7 147 70-228 1-153 (344)
283 3rc1_A Sugar 3-ketoreductase; 80.0 1.2 4.2E-05 44.4 4.1 146 71-230 27-177 (350)
284 1nff_A Putative oxidoreductase 79.9 3.8 0.00013 38.8 7.4 75 71-152 7-90 (260)
285 3tzq_B Short-chain type dehydr 79.9 8.2 0.00028 36.6 9.8 75 71-152 11-94 (271)
286 2wsb_A Galactitol dehydrogenas 79.8 4 0.00014 38.1 7.4 75 71-152 11-94 (254)
287 3pdi_A Nitrogenase MOFE cofact 79.8 2.4 8.2E-05 44.5 6.3 88 71-172 332-423 (483)
288 2nu8_A Succinyl-COA ligase [AD 79.7 12 0.00041 36.1 11.0 109 71-199 7-118 (288)
289 3tjr_A Short chain dehydrogena 79.6 4 0.00014 39.6 7.5 35 70-104 30-65 (301)
290 3uuw_A Putative oxidoreductase 79.6 1.5 5.1E-05 42.8 4.5 117 70-202 5-123 (308)
291 1cyd_A Carbonyl reductase; sho 79.6 3.8 0.00013 38.0 7.1 75 71-152 7-85 (244)
292 1h2b_A Alcohol dehydrogenase; 79.5 1.4 4.9E-05 44.1 4.4 76 70-152 186-263 (359)
293 2ywl_A Thioredoxin reductase r 79.4 2.4 8.3E-05 37.3 5.5 32 72-103 2-33 (180)
294 1pqw_A Polyketide synthase; ro 79.3 1.6 5.6E-05 39.3 4.3 76 71-152 39-116 (198)
295 4eye_A Probable oxidoreductase 79.3 2.2 7.6E-05 42.3 5.7 77 70-153 159-237 (342)
296 3fhl_A Putative oxidoreductase 79.2 6.6 0.00022 39.2 9.2 143 71-229 5-152 (362)
297 1yb1_A 17-beta-hydroxysteroid 79.2 4.4 0.00015 38.5 7.6 33 71-103 31-64 (272)
298 3fpc_A NADP-dependent alcohol 79.1 1.1 3.8E-05 44.7 3.4 78 69-152 165-244 (352)
299 3e03_A Short chain dehydrogena 79.1 11 0.00036 35.8 10.4 35 71-105 6-41 (274)
300 3rfo_A Methionyl-tRNA formyltr 79.1 3.6 0.00012 40.5 7.0 36 71-106 4-39 (317)
301 1zk4_A R-specific alcohol dehy 79.1 3.3 0.00011 38.6 6.6 34 70-103 5-39 (251)
302 3ew7_A LMO0794 protein; Q8Y8U8 79.0 2.3 7.9E-05 38.6 5.4 33 72-104 1-34 (221)
303 1mio_A Nitrogenase molybdenum 79.0 5.9 0.0002 42.0 9.1 32 71-102 335-366 (533)
304 3lk7_A UDP-N-acetylmuramoylala 79.0 9 0.00031 39.6 10.5 94 71-179 9-106 (451)
305 2bgk_A Rhizome secoisolaricire 78.7 4.1 0.00014 38.6 7.3 33 71-103 16-49 (278)
306 3jyn_A Quinone oxidoreductase; 78.7 1.5 5.3E-05 43.1 4.3 79 69-153 139-219 (325)
307 2cf5_A Atccad5, CAD, cinnamyl 78.5 2.4 8.3E-05 42.3 5.7 73 70-153 180-254 (357)
308 3aek_B Light-independent proto 78.3 5 0.00017 42.5 8.3 86 71-172 280-371 (525)
309 3ko8_A NAD-dependent epimerase 78.3 1.4 4.8E-05 42.7 3.8 34 72-105 1-35 (312)
310 3ef6_A Toluene 1,2-dioxygenase 78.2 2.3 8E-05 43.3 5.6 35 70-104 1-37 (410)
311 3m2t_A Probable dehydrogenase; 78.2 8.3 0.00028 38.4 9.6 90 72-173 6-97 (359)
312 2wyu_A Enoyl-[acyl carrier pro 78.1 3.3 0.00011 39.1 6.3 34 71-104 8-44 (261)
313 3grk_A Enoyl-(acyl-carrier-pro 78.1 2.7 9.3E-05 40.7 5.8 35 69-103 29-66 (293)
314 2vns_A Metalloreductase steap3 78.0 2.3 7.8E-05 39.2 5.0 32 71-102 28-59 (215)
315 1uuf_A YAHK, zinc-type alcohol 78.0 2.8 9.4E-05 42.2 6.0 73 70-153 194-267 (369)
316 1fjh_A 3alpha-hydroxysteroid d 77.9 3.5 0.00012 38.6 6.4 69 71-153 1-72 (257)
317 3ioy_A Short-chain dehydrogena 77.8 3.2 0.00011 40.7 6.3 35 70-104 7-42 (319)
318 3qwb_A Probable quinone oxidor 77.8 1.5 5.2E-05 43.3 3.9 79 69-153 147-227 (334)
319 2h7i_A Enoyl-[acyl-carrier-pro 77.7 2.6 8.8E-05 40.1 5.4 35 70-104 6-43 (269)
320 3kvo_A Hydroxysteroid dehydrog 77.7 13 0.00046 36.8 10.9 37 70-106 44-81 (346)
321 1yvv_A Amine oxidase, flavin-c 77.7 2.3 7.8E-05 41.5 5.1 34 70-103 1-34 (336)
322 3evn_A Oxidoreductase, GFO/IDH 77.7 2.4 8E-05 41.9 5.3 90 71-172 5-95 (329)
323 3qiv_A Short-chain dehydrogena 77.6 4.4 0.00015 37.9 7.0 33 71-103 9-42 (253)
324 3e8x_A Putative NAD-dependent 77.6 2.2 7.7E-05 39.4 4.8 38 68-105 18-56 (236)
325 3h7a_A Short chain dehydrogena 77.5 5.4 0.00018 37.5 7.6 35 71-105 7-42 (252)
326 3q0i_A Methionyl-tRNA formyltr 77.5 3.7 0.00013 40.5 6.6 36 71-106 7-42 (318)
327 2bw0_A 10-FTHFDH, 10-formyltet 77.5 1.4 4.9E-05 43.7 3.6 37 70-106 21-57 (329)
328 1uls_A Putative 3-oxoacyl-acyl 77.4 5.8 0.0002 37.0 7.7 75 71-152 5-86 (245)
329 3tnl_A Shikimate dehydrogenase 77.4 3.8 0.00013 40.3 6.6 33 71-103 154-187 (315)
330 4f3y_A DHPR, dihydrodipicolina 77.4 4.3 0.00015 39.0 6.8 92 71-172 7-101 (272)
331 3rui_A Ubiquitin-like modifier 77.3 4.9 0.00017 39.9 7.4 31 71-101 34-64 (340)
332 3mtj_A Homoserine dehydrogenas 77.1 7 0.00024 40.4 8.8 112 72-199 11-132 (444)
333 3grp_A 3-oxoacyl-(acyl carrier 77.1 4.3 0.00015 38.6 6.8 38 66-103 22-60 (266)
334 3uko_A Alcohol dehydrogenase c 77.0 5.1 0.00018 40.2 7.7 77 70-152 193-272 (378)
335 1hdc_A 3-alpha, 20 beta-hydrox 77.0 5.6 0.00019 37.4 7.6 33 71-103 5-38 (254)
336 3f1l_A Uncharacterized oxidore 77.0 6.4 0.00022 36.9 8.0 33 71-103 12-45 (252)
337 1fmt_A Methionyl-tRNA FMet for 76.9 5.3 0.00018 39.3 7.5 35 72-106 4-38 (314)
338 3i23_A Oxidoreductase, GFO/IDH 76.8 1.1 3.9E-05 44.7 2.6 147 70-229 1-152 (349)
339 2q2v_A Beta-D-hydroxybutyrate 76.8 5.9 0.0002 37.2 7.7 34 71-104 4-38 (255)
340 4hkt_A Inositol 2-dehydrogenas 76.8 2 6.8E-05 42.4 4.5 143 70-227 2-148 (331)
341 3bio_A Oxidoreductase, GFO/IDH 76.8 1.6 5.4E-05 42.8 3.6 111 70-198 8-119 (304)
342 4dio_A NAD(P) transhydrogenase 76.8 3.2 0.00011 42.3 6.0 34 71-104 190-223 (405)
343 2yv2_A Succinyl-COA synthetase 76.8 17 0.00057 35.3 11.0 105 72-199 14-125 (297)
344 3n74_A 3-ketoacyl-(acyl-carrie 76.7 5.4 0.00018 37.5 7.4 76 71-153 9-93 (261)
345 3jv7_A ADH-A; dehydrogenase, n 76.7 2.8 9.4E-05 41.6 5.5 77 69-152 170-248 (345)
346 2nwq_A Probable short-chain de 76.7 2.5 8.6E-05 40.4 5.0 74 72-152 22-106 (272)
347 3rwb_A TPLDH, pyridoxal 4-dehy 76.7 3.6 0.00012 38.6 6.0 34 70-103 5-39 (247)
348 2bll_A Protein YFBG; decarboxy 76.6 7.8 0.00027 37.7 8.8 33 72-104 1-35 (345)
349 2eez_A Alanine dehydrogenase; 76.5 2.7 9.4E-05 42.3 5.4 33 71-103 166-198 (369)
350 3tl3_A Short-chain type dehydr 76.5 3.4 0.00012 38.9 5.9 32 71-102 9-41 (257)
351 3pi7_A NADH oxidoreductase; gr 76.5 4 0.00014 40.5 6.6 75 72-152 166-242 (349)
352 3awd_A GOX2181, putative polyo 76.4 5 0.00017 37.5 7.0 33 71-103 13-46 (260)
353 1mio_B Nitrogenase molybdenum 76.3 6 0.0002 41.1 8.1 87 71-172 312-407 (458)
354 4dry_A 3-oxoacyl-[acyl-carrier 76.3 2.9 0.0001 40.1 5.4 34 71-104 33-67 (281)
355 4ggi_A UDP-2,3-diacylglucosami 76.3 1.2 4.1E-05 43.3 2.5 71 69-148 3-73 (283)
356 3kux_A Putative oxidoreductase 76.2 4 0.00014 40.6 6.6 141 72-228 8-153 (352)
357 1xhl_A Short-chain dehydrogena 76.2 3.8 0.00013 39.7 6.2 34 70-103 25-59 (297)
358 3oti_A CALG3; calicheamicin, T 76.2 11 0.00039 37.5 10.1 32 71-102 20-56 (398)
359 3oig_A Enoyl-[acyl-carrier-pro 76.1 6.6 0.00023 37.0 7.8 33 71-103 7-42 (266)
360 2ew8_A (S)-1-phenylethanol deh 76.0 8.2 0.00028 36.0 8.4 34 71-104 7-41 (249)
361 3imf_A Short chain dehydrogena 76.0 4 0.00014 38.5 6.2 34 71-104 6-40 (257)
362 3tfo_A Putative 3-oxoacyl-(acy 75.9 4 0.00014 38.9 6.2 34 70-103 3-37 (264)
363 3uxy_A Short-chain dehydrogena 75.9 6.8 0.00023 37.2 7.8 35 69-103 26-61 (266)
364 4eso_A Putative oxidoreductase 75.8 4.4 0.00015 38.2 6.4 35 69-103 6-41 (255)
365 1iy8_A Levodione reductase; ox 75.7 6 0.00021 37.4 7.4 33 71-103 13-46 (267)
366 2gdz_A NAD+-dependent 15-hydro 75.7 5 0.00017 37.9 6.9 33 71-103 7-40 (267)
367 3svt_A Short-chain type dehydr 75.6 5.4 0.00019 38.1 7.1 33 71-103 11-44 (281)
368 3l77_A Short-chain alcohol deh 75.5 2.8 9.5E-05 38.8 4.9 33 71-103 2-35 (235)
369 3ggo_A Prephenate dehydrogenas 75.5 3.2 0.00011 40.8 5.5 34 68-101 30-65 (314)
370 3hyw_A Sulfide-quinone reducta 75.4 2.4 8.2E-05 43.5 4.8 33 70-102 1-35 (430)
371 3itj_A Thioredoxin reductase 1 75.3 2.2 7.7E-05 41.5 4.4 33 70-102 21-53 (338)
372 3pk0_A Short-chain dehydrogena 75.2 5.2 0.00018 37.8 6.8 35 69-103 8-43 (262)
373 3ohs_X Trans-1,2-dihydrobenzen 75.2 1.4 4.8E-05 43.6 2.8 91 70-172 1-94 (334)
374 2jah_A Clavulanic acid dehydro 75.1 5.8 0.0002 37.1 7.0 33 71-103 7-40 (247)
375 2ho3_A Oxidoreductase, GFO/IDH 75.0 3.3 0.00011 40.7 5.5 88 72-172 2-90 (325)
376 3da8_A Probable 5'-phosphoribo 74.9 2.3 7.7E-05 39.5 3.9 74 70-149 11-95 (215)
377 4dgk_A Phytoene dehydrogenase; 74.9 2.3 8E-05 44.3 4.6 33 71-103 1-33 (501)
378 3i1j_A Oxidoreductase, short c 74.8 7.1 0.00024 36.2 7.6 33 71-103 14-47 (247)
379 2bln_A Protein YFBG; transfera 74.8 4.9 0.00017 39.3 6.6 35 72-106 1-35 (305)
380 2d8a_A PH0655, probable L-thre 74.8 2 6.8E-05 42.7 3.8 77 70-152 167-245 (348)
381 3ai3_A NADPH-sorbose reductase 74.8 6.3 0.00022 37.1 7.3 33 71-103 7-40 (263)
382 3rsc_A CALG2; TDP, enediyne, s 74.6 7.2 0.00025 39.2 8.1 32 71-102 20-56 (415)
383 4g65_A TRK system potassium up 74.5 2.8 9.4E-05 43.7 4.9 115 70-199 234-349 (461)
384 3v8b_A Putative dehydrogenase, 74.4 5.8 0.0002 38.1 7.0 34 71-104 28-62 (283)
385 1w6u_A 2,4-dienoyl-COA reducta 74.4 6.7 0.00023 37.7 7.5 34 70-103 25-59 (302)
386 2dt5_A AT-rich DNA-binding pro 74.4 2.8 9.6E-05 38.7 4.4 85 71-170 80-166 (211)
387 3e9m_A Oxidoreductase, GFO/IDH 74.4 3.5 0.00012 40.7 5.5 147 71-230 5-155 (330)
388 4e4y_A Short chain dehydrogena 74.1 10 0.00035 35.2 8.5 71 71-152 4-79 (244)
389 2hcy_A Alcohol dehydrogenase 1 74.0 4.3 0.00015 40.2 6.1 77 69-152 168-247 (347)
390 2pd6_A Estradiol 17-beta-dehyd 74.0 8.1 0.00028 36.1 7.8 33 71-103 7-40 (264)
391 1yb5_A Quinone oxidoreductase; 74.0 3.2 0.00011 41.4 5.2 78 69-152 169-248 (351)
392 3ucx_A Short chain dehydrogena 74.0 6.3 0.00022 37.2 7.1 33 71-103 11-44 (264)
393 1f8f_A Benzyl alcohol dehydrog 74.0 3 0.0001 41.9 4.9 76 70-152 190-267 (371)
394 1zem_A Xylitol dehydrogenase; 73.9 6.5 0.00022 37.0 7.1 33 71-103 7-40 (262)
395 3lzw_A Ferredoxin--NADP reduct 73.9 2.2 7.4E-05 41.5 3.8 33 71-103 7-39 (332)
396 1yxm_A Pecra, peroxisomal tran 73.9 6 0.00021 38.0 7.0 34 70-103 17-51 (303)
397 1qor_A Quinone oxidoreductase; 73.9 2.1 7.2E-05 42.1 3.7 77 70-152 140-218 (327)
398 2dpo_A L-gulonate 3-dehydrogen 73.8 3.4 0.00012 40.7 5.2 35 68-102 3-37 (319)
399 3uf0_A Short-chain dehydrogena 73.7 8.8 0.0003 36.5 8.1 31 71-101 31-62 (273)
400 1i24_A Sulfolipid biosynthesis 73.7 5.1 0.00018 40.2 6.7 32 71-102 11-43 (404)
401 4imr_A 3-oxoacyl-(acyl-carrier 73.7 9.9 0.00034 36.2 8.4 80 71-152 33-118 (275)
402 2ae2_A Protein (tropinone redu 73.7 7.2 0.00024 36.7 7.4 33 71-103 9-42 (260)
403 2z1n_A Dehydrogenase; reductas 73.6 7.1 0.00024 36.7 7.3 33 71-103 7-40 (260)
404 4huj_A Uncharacterized protein 73.6 1.9 6.5E-05 39.9 3.1 33 69-101 21-53 (220)
405 3sx2_A Putative 3-ketoacyl-(ac 73.6 24 0.00082 33.2 11.2 33 71-103 13-46 (278)
406 1zmt_A Haloalcohol dehalogenas 73.4 2.7 9.2E-05 39.6 4.2 75 71-152 1-81 (254)
407 1gee_A Glucose 1-dehydrogenase 73.4 4.6 0.00016 37.8 5.9 32 71-102 7-39 (261)
408 2pnf_A 3-oxoacyl-[acyl-carrier 73.3 5.3 0.00018 37.0 6.2 33 71-103 7-40 (248)
409 3nzo_A UDP-N-acetylglucosamine 73.3 3.7 0.00013 41.7 5.5 76 71-151 35-120 (399)
410 3a28_C L-2.3-butanediol dehydr 73.3 6.3 0.00021 37.0 6.8 34 71-104 2-36 (258)
411 3gvx_A Glycerate dehydrogenase 73.3 12 0.0004 36.3 8.8 35 70-104 121-155 (290)
412 2hq1_A Glucose/ribitol dehydro 73.2 11 0.00038 34.7 8.5 31 71-101 5-36 (247)
413 4gx0_A TRKA domain protein; me 73.2 3 0.0001 44.5 5.0 74 69-149 125-198 (565)
414 3uce_A Dehydrogenase; rossmann 73.2 4.3 0.00015 37.2 5.5 61 71-152 6-68 (223)
415 3op4_A 3-oxoacyl-[acyl-carrier 73.2 6.1 0.00021 37.0 6.7 75 71-152 9-92 (248)
416 3e18_A Oxidoreductase; dehydro 73.1 3 0.0001 41.8 4.6 87 72-172 6-93 (359)
417 2x6t_A ADP-L-glycero-D-manno-h 73.1 3.6 0.00012 40.7 5.2 34 71-104 46-81 (357)
418 4e12_A Diketoreductase; oxidor 73.0 3.8 0.00013 39.5 5.2 31 71-101 4-34 (283)
419 2b4q_A Rhamnolipids biosynthes 72.9 8 0.00027 36.9 7.6 33 71-103 29-62 (276)
420 2ew2_A 2-dehydropantoate 2-red 72.9 3.4 0.00012 40.0 4.9 31 71-101 3-33 (316)
421 3sc4_A Short chain dehydrogena 72.9 21 0.00072 34.0 10.7 35 71-105 9-44 (285)
422 4a2c_A Galactitol-1-phosphate 72.9 3.9 0.00013 40.3 5.5 76 70-152 160-238 (346)
423 4dup_A Quinone oxidoreductase; 72.8 3.8 0.00013 40.8 5.3 78 69-153 166-245 (353)
424 2zat_A Dehydrogenase/reductase 72.8 5.9 0.0002 37.2 6.5 33 71-103 14-47 (260)
425 2iyf_A OLED, oleandomycin glyc 72.8 12 0.0004 37.8 9.3 33 71-103 7-44 (430)
426 4dqx_A Probable oxidoreductase 72.8 7.2 0.00025 37.2 7.2 33 71-103 27-60 (277)
427 1xu9_A Corticosteroid 11-beta- 72.8 4.1 0.00014 39.0 5.5 33 71-103 28-61 (286)
428 4fc7_A Peroxisomal 2,4-dienoyl 72.7 11 0.00038 35.8 8.6 34 70-103 26-60 (277)
429 3pgx_A Carveol dehydrogenase; 72.7 25 0.00086 33.2 11.1 37 66-102 10-47 (280)
430 4da9_A Short-chain dehydrogena 72.6 8.4 0.00029 36.8 7.7 32 71-102 29-61 (280)
431 1cdo_A Alcohol dehydrogenase; 72.6 6.6 0.00023 39.3 7.2 77 70-152 192-271 (374)
432 3gk3_A Acetoacetyl-COA reducta 72.6 5 0.00017 38.1 5.9 31 71-101 25-56 (269)
433 1e3i_A Alcohol dehydrogenase, 72.6 6.5 0.00022 39.4 7.1 77 70-152 195-274 (376)
434 2gek_A Phosphatidylinositol ma 72.5 12 0.0004 37.2 9.0 82 70-151 19-115 (406)
435 1fmc_A 7 alpha-hydroxysteroid 72.4 5.1 0.00017 37.3 5.9 33 71-103 11-44 (255)
436 2h6e_A ADH-4, D-arabinose 1-de 72.3 1.9 6.6E-05 42.8 3.0 74 70-152 170-247 (344)
437 4dmm_A 3-oxoacyl-[acyl-carrier 72.2 5.8 0.0002 37.7 6.3 32 71-102 28-60 (269)
438 3rjz_A N-type ATP pyrophosphat 72.1 21 0.00073 33.3 10.0 143 72-232 5-150 (237)
439 3ctm_A Carbonyl reductase; alc 72.0 6.8 0.00023 37.1 6.8 35 71-105 34-69 (279)
440 2gv8_A Monooxygenase; FMO, FAD 72.0 3.7 0.00013 42.3 5.2 34 70-103 5-40 (447)
441 2jhf_A Alcohol dehydrogenase E 72.0 6.7 0.00023 39.2 7.0 77 70-152 191-270 (374)
442 3osu_A 3-oxoacyl-[acyl-carrier 72.0 6.4 0.00022 36.7 6.5 33 70-102 3-36 (246)
443 3f9i_A 3-oxoacyl-[acyl-carrier 71.9 3.3 0.00011 38.7 4.4 77 71-152 14-93 (249)
444 3qlj_A Short chain dehydrogena 71.9 6.3 0.00022 38.5 6.7 38 66-103 22-60 (322)
445 1wly_A CAAR, 2-haloacrylate re 71.7 3 0.0001 41.0 4.3 78 70-153 145-224 (333)
446 3ia7_A CALG4; glycosysltransfe 71.6 8.4 0.00029 38.3 7.7 32 71-102 4-40 (402)
447 2yv1_A Succinyl-COA ligase [AD 71.6 21 0.00072 34.5 10.3 107 72-199 14-124 (294)
448 1xq1_A Putative tropinone redu 71.5 5.4 0.00019 37.5 5.9 33 71-103 14-47 (266)
449 4egf_A L-xylulose reductase; s 71.3 4.6 0.00016 38.3 5.4 34 70-103 19-53 (266)
450 3nyw_A Putative oxidoreductase 71.1 6.9 0.00024 36.7 6.5 34 71-104 7-41 (250)
451 2dph_A Formaldehyde dismutase; 71.1 4.8 0.00016 40.8 5.7 78 70-153 185-264 (398)
452 2vou_A 2,6-dihydroxypyridine h 71.1 4.6 0.00016 40.7 5.6 32 71-102 5-36 (397)
453 3ado_A Lambda-crystallin; L-gu 71.1 4.4 0.00015 39.9 5.2 33 69-101 4-36 (319)
454 2j8z_A Quinone oxidoreductase; 71.0 3.5 0.00012 41.0 4.6 78 70-153 162-241 (354)
455 1j5p_A Aspartate dehydrogenase 71.0 14 0.00049 34.9 8.5 29 71-102 12-40 (253)
456 3i83_A 2-dehydropantoate 2-red 70.8 4.1 0.00014 39.9 5.0 33 70-102 1-33 (320)
457 3edm_A Short chain dehydrogena 70.8 13 0.00043 35.0 8.4 31 71-101 8-39 (259)
458 3ek2_A Enoyl-(acyl-carrier-pro 70.8 6.6 0.00023 36.9 6.4 33 71-103 14-49 (271)
459 1f0y_A HCDH, L-3-hydroxyacyl-C 70.8 4.8 0.00016 39.1 5.4 31 71-101 15-45 (302)
460 2gk4_A Conserved hypothetical 70.6 18 0.0006 33.8 9.0 70 71-150 3-91 (232)
461 1wma_A Carbonyl reductase [NAD 70.5 5 0.00017 37.7 5.4 33 71-103 4-38 (276)
462 3h28_A Sulfide-quinone reducta 70.5 4 0.00014 41.7 5.0 34 70-103 1-36 (430)
463 3lyl_A 3-oxoacyl-(acyl-carrier 70.5 7 0.00024 36.3 6.4 33 71-103 5-38 (247)
464 2cul_A Glucose-inhibited divis 70.2 4.9 0.00017 37.2 5.2 32 72-103 4-35 (232)
465 4eez_A Alcohol dehydrogenase 1 70.2 3.7 0.00012 40.6 4.5 77 69-151 162-240 (348)
466 4b7c_A Probable oxidoreductase 70.2 5 0.00017 39.4 5.5 77 69-152 148-227 (336)
467 3tox_A Short chain dehydrogena 70.2 3.8 0.00013 39.3 4.5 34 70-103 7-41 (280)
468 4iin_A 3-ketoacyl-acyl carrier 70.1 8.1 0.00028 36.6 6.9 32 71-102 29-61 (271)
469 2gn4_A FLAA1 protein, UDP-GLCN 70.1 4.9 0.00017 39.7 5.5 73 71-152 21-100 (344)
470 1h5q_A NADP-dependent mannitol 70.0 11 0.00037 35.2 7.6 34 71-104 14-48 (265)
471 3h8v_A Ubiquitin-like modifier 69.8 9.7 0.00033 36.9 7.3 34 71-105 36-69 (292)
472 1piw_A Hypothetical zinc-type 69.8 4.1 0.00014 40.6 4.8 74 70-153 179-253 (360)
473 2raf_A Putative dinucleotide-b 69.8 15 0.00053 33.3 8.4 45 71-119 19-63 (209)
474 3c24_A Putative oxidoreductase 69.8 5 0.00017 38.5 5.3 32 70-101 10-42 (286)
475 3ics_A Coenzyme A-disulfide re 69.7 4.1 0.00014 43.6 5.1 37 68-104 33-71 (588)
476 1e7w_A Pteridine reductase; di 69.6 4.5 0.00016 38.9 5.0 34 68-101 6-40 (291)
477 3h8l_A NADH oxidase; membrane 69.6 4 0.00014 41.3 4.8 33 71-103 1-36 (409)
478 1p0f_A NADP-dependent alcohol 69.6 6.3 0.00022 39.4 6.2 77 70-152 191-270 (373)
479 1iz0_A Quinone oxidoreductase; 69.5 6.5 0.00022 38.0 6.1 72 70-153 125-198 (302)
480 3sju_A Keto reductase; short-c 69.5 8.2 0.00028 36.8 6.8 33 71-103 24-57 (279)
481 1vli_A Spore coat polysacchari 69.4 23 0.00078 35.7 10.1 124 127-274 41-196 (385)
482 4gsl_A Ubiquitin-like modifier 69.4 8.9 0.00031 41.1 7.4 31 71-101 326-356 (615)
483 1rjw_A ADH-HT, alcohol dehydro 69.3 5.1 0.00018 39.5 5.4 75 70-152 164-239 (339)
484 3doj_A AT3G25530, dehydrogenas 69.2 4.6 0.00016 39.4 4.9 32 71-102 21-52 (310)
485 3krt_A Crotonyl COA reductase; 69.2 3.3 0.00011 42.9 4.1 80 69-152 227-323 (456)
486 1r6d_A TDP-glucose-4,6-dehydra 69.1 22 0.00076 34.4 10.1 72 72-152 1-85 (337)
487 3oc4_A Oxidoreductase, pyridin 69.1 3.9 0.00013 42.2 4.6 34 71-104 2-37 (452)
488 2c07_A 3-oxoacyl-(acyl-carrier 69.1 8.9 0.00031 36.6 6.9 33 70-102 43-76 (285)
489 1hxh_A 3BETA/17BETA-hydroxyste 69.0 5.9 0.0002 37.1 5.5 32 71-102 6-38 (253)
490 3oh8_A Nucleoside-diphosphate 69.0 19 0.00065 37.7 10.1 35 71-105 147-182 (516)
491 2b69_A UDP-glucuronate decarbo 69.0 5.4 0.00018 39.1 5.5 36 68-103 24-60 (343)
492 1tlt_A Putative oxidoreductase 69.0 4.2 0.00014 39.7 4.6 114 71-200 5-120 (319)
493 1xdw_A NAD+-dependent (R)-2-hy 68.9 9.6 0.00033 37.7 7.2 35 70-104 145-179 (331)
494 1v3u_A Leukotriene B4 12- hydr 68.9 7.4 0.00025 38.1 6.5 77 70-152 145-223 (333)
495 3k1t_A Glutamate--cysteine lig 68.9 4.1 0.00014 40.9 4.3 51 224-274 280-333 (432)
496 3s2e_A Zinc-containing alcohol 68.9 6.8 0.00023 38.6 6.2 76 69-152 165-241 (340)
497 3urh_A Dihydrolipoyl dehydroge 68.9 4.6 0.00016 42.1 5.2 35 68-102 22-56 (491)
498 3ezy_A Dehydrogenase; structur 68.8 4.1 0.00014 40.3 4.5 141 70-228 1-150 (344)
499 3lf2_A Short chain oxidoreduct 68.8 9.5 0.00032 36.0 7.0 33 71-103 8-41 (265)
500 2uvd_A 3-oxoacyl-(acyl-carrier 68.7 7.2 0.00025 36.3 6.0 32 71-102 4-36 (246)
No 1
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=100.00 E-value=2e-87 Score=726.81 Aligned_cols=451 Identities=35% Similarity=0.567 Sum_probs=397.3
Q ss_pred CcCCCCCcEEEEEcCcHHHHHHHHHHHHc---------CCCEEEEecCCC--CCChhhhccCEEEEcCCCCCCCCCCCHH
Q 009323 65 LKVTCRQEKILVANRGEIAVRVIRTAHEM---------GIPCVAVYSTID--KDALHVKLADESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 65 ~~~~~~~~kvLi~g~g~~a~~ii~aa~~~---------G~~vv~v~~~~d--~~~~~~~~ad~~~~i~~~~~~~~~~~~~ 133 (537)
.++.+|++||||+|||+++++++++||++ |+++|+++++.| .++++.++||+++++++.+..++|+|.+
T Consensus 50 ~~g~~~~~kvLIanrGeiA~riira~r~lG~e~f~~e~Gi~tVav~s~~D~~~~a~~~~~ADe~v~i~~~~~~~syld~~ 129 (587)
T 3jrx_A 50 FGGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVE 129 (587)
T ss_dssp TTCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHH
T ss_pred cCCCcccCEEEEECChHHHHHHHHHHHHhhhccccccCCceEEEEecccccCcCChhhHhCCEEEEeCCCCccccccCHH
Confidence 46778999999999999999999999987 799999998666 8899999999999998888889999999
Q ss_pred HHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC---------
Q 009323 134 NVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD--------- 204 (537)
Q Consensus 134 ~i~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~--------- 204 (537)
.|+++|++.++|+|||+|||++|++.+++.+++.|++++||+++++..++||..+|++|+++|||+|++..
T Consensus 130 ~Il~~a~~~~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~ 209 (587)
T 3jrx_A 130 LIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTE 209 (587)
T ss_dssp HHHHHHHHTTCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC--
T ss_pred HHHHHHHHhCCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeecccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999842
Q ss_pred ------------------ccCCCHHHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcE
Q 009323 205 ------------------GLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGV 266 (537)
Q Consensus 205 ------------------~~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~ 266 (537)
..+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+.++. .+..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iGyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~~----~~~~v 285 (587)
T 3jrx_A 210 DDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPI 285 (587)
T ss_dssp ----CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHCSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHHS----TTCCE
T ss_pred cccccccccccchhhccccccCCHHHHHHHHHhcCCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhhc----cCCCE
Confidence 11789999999999999999999999999999999999999999999887653 24789
Q ss_pred EEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Q 009323 267 YLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFL 346 (537)
Q Consensus 267 lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~ 346 (537)
+||+||+|++|++|+++.|++|+++++++++|++++++++.++++|++.++++.+++|.+.+.++++++||.|++++||+
T Consensus 286 lVEeyI~g~rei~V~vl~D~~G~vv~l~~rd~siqrr~qk~ie~aPa~~l~~~~~~~i~~~A~~~a~alGy~G~~~VEfl 365 (587)
T 3jrx_A 286 FLMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 365 (587)
T ss_dssp EEEECCCSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred EEEEecCCCcEEEEEEEEcCCCCEEEEeeeeccccccccceeEecCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Confidence 99999999999999999999999999999999999999999999999878999999999999999999999999999999
Q ss_pred EeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCCCC--------------------CCCCc--cccceeEE
Q 009323 347 LDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLR--------------------YKQED--IVLQGHSI 404 (537)
Q Consensus 347 ~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~l~--------------------~~~~~--~~~~g~ai 404 (537)
++++|++||+|||||+|++++++++++|+|++++++++++|++++ +.+.+ +.++||++
T Consensus 366 ~d~dG~~yflEINpRl~~e~~vte~~tGvdlv~~~lria~G~pL~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~ghai 445 (587)
T 3jrx_A 366 YSQDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVI 445 (587)
T ss_dssp ECSSSCEEEEEEESSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCSSSCSSCCCCCSEEE
T ss_pred EeCCCCEEEEEEeCCCCCccceeccccCCCHHHHHHHHHCCCCcccchhcccccccccccccccccccccccCCCCceEE
Confidence 998899999999999999999999999999999999999999986 12222 56789999
Q ss_pred EEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEee-
Q 009323 405 ECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITG- 483 (537)
Q Consensus 405 ~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g- 483 (537)
+||||||||.++|.|++|+|+.+..|.+++++....+..+..|+++||||+||||+||+||++|+++|.+||+++.|+|
T Consensus 446 e~Ri~aedp~~~f~p~~G~i~~~~~~~~~~v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~ 525 (587)
T 3jrx_A 446 AARITSENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGD 525 (587)
T ss_dssp EEEEEC----------CCCCEEEECSSCTTEEEEECCC----------CCEEEEEEEESSHHHHHHHHHHHHHHHHHSST
T ss_pred EEeecccCccccCCCCCcEEEEEEeCCCCceEEeccccccCCcCcccCcccceEEEEcCCHHHHHHHHHHHHhccEEeCC
Confidence 9999999999999999999999999988999865554444469999999999999999999999999999999999999
Q ss_pred eccCHHHHHHhcCCccccCCcccccccccchhhccC
Q 009323 484 VPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQA 519 (537)
Q Consensus 484 ~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~~ 519 (537)
++||++||+.||.||+|++|+++|+||++++.++..
T Consensus 526 ~~tn~~~~~~~~~~~~f~~g~~~t~~~~~~~~~~~~ 561 (587)
T 3jrx_A 526 FRTTVEYLINLLETESFQNNDIDTGWLDYLIAEKVQ 561 (587)
T ss_dssp TSSTTHHHHHHHTSHHHHTTCSCCGGGGC-------
T ss_pred CCCcHHHHHHHhCChhhccCCcchhHHhHhhhhhcc
Confidence 899999999999999999999999999999887753
No 2
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=100.00 E-value=9.7e-86 Score=711.76 Aligned_cols=446 Identities=35% Similarity=0.567 Sum_probs=372.7
Q ss_pred CcCCCCCcEEEEEcCcHHHHHHHHHHHHc---------CCCEEEEecCCC--CCChhhhccCEEEEcCCCCCCCCCCCHH
Q 009323 65 LKVTCRQEKILVANRGEIAVRVIRTAHEM---------GIPCVAVYSTID--KDALHVKLADESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 65 ~~~~~~~~kvLi~g~g~~a~~ii~aa~~~---------G~~vv~v~~~~d--~~~~~~~~ad~~~~i~~~~~~~~~~~~~ 133 (537)
.++.+|+|||||+|||++|++++++||++ |+++|+++++.| .++++.++||+++++++.+..++|+|.+
T Consensus 34 ~~~~~~~~kvLianrGeia~riira~r~lg~e~~~~e~gi~~Vav~s~~D~~~~a~~~~~ADe~~~i~~~~~~~sy~d~~ 113 (540)
T 3glk_A 34 FGGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVE 113 (540)
T ss_dssp TTCSCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHH
T ss_pred cCCcccccEEEEECChHHHHHHHHHHHHhccccccccCCcEEEEEEcCcccCcCChhHHhCCEEEEeCCCCcccccccHH
Confidence 36678899999999999999999999987 799999998655 8899999999999998888889999999
Q ss_pred HHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC---------
Q 009323 134 NVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD--------- 204 (537)
Q Consensus 134 ~i~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~--------- 204 (537)
.|+++|++.++|+|||+|||++|++.+++.+++.|++++||+++++..++||..+|++|+++|||+|++..
T Consensus 114 ~ii~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~ 193 (540)
T 3glk_A 114 LIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTE 193 (540)
T ss_dssp HHHHHHHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCC
T ss_pred HHHHHHHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999842
Q ss_pred ------------------ccCCCHHHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcE
Q 009323 205 ------------------GLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGV 266 (537)
Q Consensus 205 ------------------~~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~ 266 (537)
..+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+.++. .+..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~igyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~~----~~~~v 269 (540)
T 3glk_A 194 DDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPI 269 (540)
T ss_dssp TTC----CCCCCHHHHHHTSCCSHHHHHHHHHHHCSSEEEEETTCC----EEEECSTTTHHHHHHHHHHHS----TTCCE
T ss_pred cccccccccccccccccccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhhc----cCCCE
Confidence 11789999999999999999999999999999999999999999999887653 24789
Q ss_pred EEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Q 009323 267 YLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFL 346 (537)
Q Consensus 267 lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~ 346 (537)
+||+||+|++|++|+++.|++|+++++++++|++++++++..+.+|++.++++..++|.+.+.++++++||.|++++||+
T Consensus 270 lVEe~I~g~rei~V~vl~d~~G~vv~l~~rd~s~qr~~~k~ie~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~VEf~ 349 (540)
T 3glk_A 270 FLMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYL 349 (540)
T ss_dssp EEEECCSSEEEEEEEEEECTTSCEEEEEEEEEEEC---CCSEEEESCTTSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred EEEEecCCCcEEEEEEEEcCCCCEEEEeceeeeeeecccceEEecCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEE
Confidence 99999999999999999999999999999999999999999999999878999999999999999999999999999999
Q ss_pred EeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCCCCC--------------------CCC--ccccceeEE
Q 009323 347 LDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLRY--------------------KQE--DIVLQGHSI 404 (537)
Q Consensus 347 ~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~l~~--------------------~~~--~~~~~g~ai 404 (537)
++++|++||+|||||+|++|+++++++|+|++++++++++|.+++. .+. .+..+||++
T Consensus 350 ~d~dg~~~~lEiNpR~~~~~~vte~~tGvdl~~~~lr~a~G~pL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~ai 429 (540)
T 3glk_A 350 YSQDGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVI 429 (540)
T ss_dssp EETTSCEEEEEEECSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCSSCCSCCCSCCC----CCCSEEE
T ss_pred EcCCCCEEEEEEECCCCCcchhhHhHhCCCHHHHHHHHHCCCCcccccccccccccccccccccccccccccCCCceeEE
Confidence 9988999999999999999999999999999999999999999861 111 145789999
Q ss_pred EEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEee-
Q 009323 405 ECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITG- 483 (537)
Q Consensus 405 ~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g- 483 (537)
+||||||||..+|.|++|+|+.+..|.+++++....+..+..|+++||||+||||++|+||++|+++|.+||+++.|+|
T Consensus 430 e~ri~aedp~~~f~p~~G~i~~~~~~~~~~v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g~ 509 (540)
T 3glk_A 430 AARITSENPDEGFKPSSGTVQELNFRSSKNVWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGD 509 (540)
T ss_dssp EEEEC------------CCEEECCCSSCCSEEEEEEC------------CEEEEEEEESSHHHHHHHHHHHHHHHTCC--
T ss_pred EEEEeccCCcccccCCceEEEEEEcCCCCcEEEEeccccCCCCCCccCcccceEEEEcCCHHHHHHHHHHHHhccEEecc
Confidence 9999999999999999999999988888999875555444469999999999999999999999999999999999999
Q ss_pred eccCHHHHHHhcCCccccCCcccccccccch
Q 009323 484 VPTTIEYHKLILDVEDFKNGKVDTAFIPKHE 514 (537)
Q Consensus 484 ~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~ 514 (537)
++||++||+.||.||+|++|+++|+||++++
T Consensus 510 ~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~ 540 (540)
T 3glk_A 510 FRTTVEYLINLLETESFQNNDIDTGWLDYLI 540 (540)
T ss_dssp --HHHHHHHHHHHSHHHHHTCC---------
T ss_pred cCCcHHHHHHHhCChhhcCCCccchhhhhcC
Confidence 8999999999999999999999999999763
No 3
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=100.00 E-value=6.4e-86 Score=730.51 Aligned_cols=452 Identities=49% Similarity=0.805 Sum_probs=422.4
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+|++||||+|+|+++++++++|+++|+++++++++.+..+.+.++||+.+++++.+..++|+|.+.|++++++.++|+|+
T Consensus 26 ~m~~kILI~g~Geia~~iiraar~lGi~~vav~s~~d~~a~~~~~AD~~~~i~~~~~~~syld~~~i~~~a~~~~~daI~ 105 (675)
T 3u9t_A 26 RSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGAKPADSYLRGDRIIAAALASGAQAIH 105 (675)
T ss_dssp CCCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHTCSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCchhHhhCCEEEEcCCCccccCccCHHHHHHHHHHhCcCEEE
Confidence 37899999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEe
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp 228 (537)
|+|||++|++.+++.+++.|++++||++++++.++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||||
T Consensus 106 pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~igyPvvvKp 185 (675)
T 3u9t_A 106 PGYGFLSENADFARACEEAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLLKA 185 (675)
T ss_dssp CCSSTTTTCHHHHHHHHTTTCEESSCCHHHHHHHTSHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSCSSBCCBC
T ss_pred eCCcccccCHHHHHHHHHcCCceeCCCHHHHHHhchHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCCCcEEEEE
Confidence 99999999999999999999999999999999999999999999999999999854457899999999999999999999
Q ss_pred cCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeE
Q 009323 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 229 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~ 308 (537)
..|+||+||++|++.+|+.++++.+.+++...|+++.+++|+||+|++|++++++.|++|+++++++++|++++++++++
T Consensus 186 ~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEeyI~g~reiev~v~~d~~G~vv~l~~rd~s~qr~~qk~i 265 (675)
T 3u9t_A 186 AAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQRRHQKVV 265 (675)
T ss_dssp CC------CCCBCCTTTHHHHHSCCCC--------CCCBCCBCCSSCBCEEEEEEECSSSCEEEEEEEECCCBSSSSBCE
T ss_pred CCCCCCccEEEECCHHHHHHHHHHHHHHHHHhcCCCcEEEEeecCCCcEEEEEEEEcCCCCEEEEeccccceeeccceEE
Confidence 99999999999999999999999887777777888899999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCC
Q 009323 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 ~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~ 388 (537)
+++|++.++++.+++|.+.+.++++++||.|++++||+++++|++||+|||||++++|+++++++|+|++++++++++|+
T Consensus 266 e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~dG~~~~iEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G~ 345 (675)
T 3u9t_A 266 EEAPAPGLGAELRRAMGEAAVRAAQAIGYVGAGTVEFLLDERGQFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVARGE 345 (675)
T ss_dssp EEESCSSCCHHHHHHHHHHHHHHHHHTTCCSEEEEECCBCTTSCBCBCEEESSCCTTHHHHHHTTTCCHHHHHHHHHTTC
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEcCCCCEEEEeccccccCCchhhhhhcCCCHHHHHHHHHCCC
Confidence 99999889999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred CCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcC-CCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHH
Q 009323 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPA-GGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREK 467 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~-~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~e 467 (537)
++++.+.++..+||++++|+|+|||.++|.|++|+++.+..| .++++|+++++++|+.|+++|||++|+||++|+|+++
T Consensus 346 ~l~~~~~~~~~~g~ai~~ri~aedp~~~f~P~~G~l~~~~~p~~~~gvr~d~~~~~G~~v~~~~ds~la~vi~~g~~r~~ 425 (675)
T 3u9t_A 346 ALPLTQEQVPLNGHAIEVRLYAEDPEGDFLPASGRLMLYREAAAGPGRRVDSGVREGDEVSPFYDPMLAKLIAWGETREE 425 (675)
T ss_dssp CCSCCTTTCCCCSEEEEEEEESCCTTTTSCCCCCBCSEEECCCCCTTEEEEESCCTTCBCCTTSCCEEEEEEEEESSHHH
T ss_pred CCCCCccccccCcceeEEEEEeccCcccccCCCCEEEEEECCCCCCCEEEEecccCCCEeCCCCCCceEEEEEEeCCHHH
Confidence 999888888889999999999999999999999999999887 7899999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhccCC
Q 009323 468 AIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQAP 520 (537)
Q Consensus 468 a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~~~ 520 (537)
|++++.++|++++|+|++||++||++||.||+|++|++||+||+++++++.++
T Consensus 426 a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 478 (675)
T 3u9t_A 426 ARQRLLAMLAETSVGGLRTNLAFLRRILGHPAFAAAELDTGFIARHQDDLLPA 478 (675)
T ss_dssp HHHHHHHHHHTCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHTHHHHSCC
T ss_pred HHHHHHHHhhcEEEECccCCHHHHHHHhCCHHHhCCCcccchhhhcchhhcCC
Confidence 99999999999999999999999999999999999999999999999887543
No 4
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=100.00 E-value=4.5e-86 Score=732.40 Aligned_cols=448 Identities=50% Similarity=0.827 Sum_probs=366.7
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
|+|||||+|+|+++++++++|+++|+++++++++.+..+++.+++|+.+++++.+..++|+|.+.|++++++.++|+|||
T Consensus 1 m~~kiLIanrGeia~riiraar~lGi~~vav~sd~d~~a~~~~~aD~~~~i~p~~~~~syld~~~i~~~a~~~~~daI~p 80 (681)
T 3n6r_A 1 MFNKILIANRGEIACRVIKTARKMGISTVAIYSDADKQALHVQMADEAVHIGPPPANQSYIVIDKVMAAIRATGAQAVHP 80 (681)
T ss_dssp -CCCBCBSCCHHHHHHHHHHHGGGSCCBCCEECSTTSSCHHHHHSSCCEECSSSSGGGTTSCHHHHHHHHHHTCCSCCBC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEEcCCCCCChhHHhCCEEEEcCCCCcccCccCHHHHHHHHHHhCcCEEEE
Confidence 68999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEec
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~ 229 (537)
+|||++|++.+++.+++.|++++||+++++..++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||||.
T Consensus 81 g~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~igyPvVvKp~ 160 (681)
T 3n6r_A 81 GYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIKAS 160 (681)
T ss_dssp CSSSSTTCHHHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC---------------------------
T ss_pred CCCccccCHHHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcCCcEEEEEC
Confidence 99999999999999999999999999999999999999999999999999998545788999999999999999999999
Q ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEE
Q 009323 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~ 309 (537)
.|+||+||+++++.+|+.++++.+.+++...|++..+++|+||+|++|++++++.|++|+++++++++|++++++++.++
T Consensus 161 ~ggggkGv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEe~I~g~rei~V~v~~d~~G~vv~l~~rd~s~qr~~~k~~e 240 (681)
T 3n6r_A 161 AGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECSIQRRNQKVVE 240 (681)
T ss_dssp ------------------------------------------CCSCEEEEEEEECCSSSCCEEEEEEECCCEETTEECEE
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCcEEEEEEEEeCCCCEEEEeeeecceeccCccEEE
Confidence 99999999999999999999999988887788889999999999989999999999999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCC
Q 009323 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 310 ~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~ 389 (537)
++|++.++++.+++|.+.+.++++++||.|++++||+++++|++||||||||++++|+++++++|+|++++++++++|++
T Consensus 241 ~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~d~dg~~~~lEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G~~ 320 (681)
T 3n6r_A 241 EAPSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIVDGQKNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGEP 320 (681)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTSCCCCCEEECSCCTTHHHHHHHHTCCHHHHHHHHHTSCC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEeCCCCEEEEecccccCCCcHHhHHHhCCCHHHHHHHHHCCCC
Confidence 99998899999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCC-C-------------------CeEEEeeeccCCCccCC
Q 009323 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAG-G-------------------PFVRMDSHVYPDYVVPP 449 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~-~-------------------~~vr~~~~~~~G~~v~~ 449 (537)
+++.+.++...||++++|+|+|||.++|.|++|+|+.+..|. + +++|+|+++++|+.|++
T Consensus 321 l~~~~~~~~~~g~ai~~ri~aedp~~~f~p~~G~i~~~~~p~~~~~~~~~~~~~w~~d~~~~~~~vr~d~~~~~g~~v~~ 400 (681)
T 3n6r_A 321 LSITQGDVKLTGWAIENRLYAEDPYRGFLPSIGRLTRYRPPAETAAGPLLVNGKWQGDAPSGEAAVRNDTGVYEGGEISM 400 (681)
T ss_dssp CSSCTTTCCCCSEEEEEEEESEEGGGTTEECCEECSCEECCCC--------------------CCEEEEESCCTTCEECT
T ss_pred CCCCccccceeEEEEEEEEecCCcccccCCCCcEEEEEECCCCCcccccccccccccccccCCCcEEEEccccCCCccCC
Confidence 998888888999999999999999999999999999998776 3 48999999999999999
Q ss_pred CCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhc
Q 009323 450 SYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (537)
Q Consensus 450 ~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 517 (537)
+||||+||||++|+|+++|+++|.++|+++.|+|++||++||++||.||+|++|+++|+||++++.++
T Consensus 401 ~yd~~iak~i~~g~~r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 468 (681)
T 3n6r_A 401 YYDPMIAKLCTWAPTRAAAIEAMRIALDSFEVEGIGHNLPFLSAVMDHPKFISGDMTTAFIAEEYPEG 468 (681)
T ss_dssp TSCCEEEEEEEEESSHHHHHHHHHHHHHHCEECSSCCSHHHHHHHHHCHHHHHCCCCSSHHHHHCTTS
T ss_pred CCCCceeEEEEEcCCHHHHHHHHHHHHhcCEEECccCCHHHHHHHhCCHhhccCCcccchhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998664
No 5
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=100.00 E-value=3e-82 Score=675.35 Aligned_cols=445 Identities=53% Similarity=0.916 Sum_probs=426.6
Q ss_pred CCCCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 67 VTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 67 ~~~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
..||+|||||+|+|+++++++++|+++|+++++++++.+..+++.+++|+.+++++.+..++|.|.+.|++++++.++|+
T Consensus 2 n~m~~~kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~ 81 (446)
T 3ouz_A 2 NAMEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADA 81 (446)
T ss_dssp CTTCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSE
T ss_pred CccccceEEEECCCHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCE
Confidence 35789999999999999999999999999999999999999999999999999988888899999999999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEE
Q 009323 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMI 226 (537)
Q Consensus 147 V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~Pvvv 226 (537)
|+|++|+++|+..+++.+++.|++++||+++++..++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||
T Consensus 82 i~p~~g~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g~Pvvv 161 (446)
T 3ouz_A 82 IFPGYGFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVIL 161 (446)
T ss_dssp EECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHCSSEEE
T ss_pred EEECCcccccCHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999998433789999999999999999999
Q ss_pred EecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccce
Q 009323 227 KATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQK 306 (537)
Q Consensus 227 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~ 306 (537)
||..|+||+||+++++.+|+.++++.+..++...|++..+++|+||+|++|++++++.|++|+++++++++|++++++++
T Consensus 162 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~d~~g~~~~~~~~~~~~~~~~~~ 241 (446)
T 3ouz_A 162 KAAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDSFGNVIHVGERDCSMQRRHQK 241 (446)
T ss_dssp EETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEE
T ss_pred EECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCCcEEEEEEEEcCCCCEEEEeeceeeeeecCce
Confidence 99999999999999999999999999998888888889999999999989999999999999999999999999999999
Q ss_pred eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHc
Q 009323 307 LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAM 386 (537)
Q Consensus 307 ~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~ 386 (537)
..+.+|++.++++..+++.+.+.++++++||.|++|+||+++++|++||+|||||+++++++++.++|+|++++++++++
T Consensus 242 ~~~~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve~~~~~~g~~~~iEiNpR~~g~~~~~~~~~G~dl~~~~~~~~~ 321 (446)
T 3ouz_A 242 LIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAE 321 (446)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEEEeCCCCEEEEEeECCCCCcceeeeeeeCCCHHHHHHHHHC
Confidence 99999997799999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHH
Q 009323 387 GGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (537)
Q Consensus 387 G~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ 466 (537)
|++++ .+.++...||++++|+++++| ..|.|++|+++.+..|..+++|++.++++|+.|+++|||++|+|+++|+|++
T Consensus 322 G~~l~-~~~~~~~~g~ai~~ri~ae~~-~~~~p~~G~i~~~~~p~~~~vr~~~~~~~G~~v~~~~d~~~~~vi~~g~~~~ 399 (446)
T 3ouz_A 322 GYALP-SQESIKLNGHSIECRITAEDS-KTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPAYYDSMIGKLVVWAEDRN 399 (446)
T ss_dssp TCCCC-CGGGCCCCSEEEEEEEESBCT-TTCCBCCEECSEEECCCSTTEEEEECCCTTCEECTTTCCEEEEEEEEESSHH
T ss_pred CCCCC-cCCCCCcceEEEEEEeeccCC-CccCCCCcEEeEEecCCCCCEEEEcccccCCEeCCccCCcceEEEEEcCCHH
Confidence 99987 556677889999999999999 8999999999999999889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccc
Q 009323 467 KAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKH 513 (537)
Q Consensus 467 ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 513 (537)
+|++++.+++++++|+|++||++||++||.||+|++|+++|+||+++
T Consensus 400 ~a~~~~~~al~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (446)
T 3ouz_A 400 KAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH 446 (446)
T ss_dssp HHHHHHHHHHHHCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHC
T ss_pred HHHHHHHHHHhhCEEeCccCCHHHHHHHhCChhhccCCccccccccC
Confidence 99999999999999999999999999999999999999999999874
No 6
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=1.8e-79 Score=709.70 Aligned_cols=449 Identities=45% Similarity=0.764 Sum_probs=413.4
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCC-CCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-PSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~-~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
+|++||||+|+|+++++++++|+++|+++++++++++..+.+..++|+.+++++. ...++|+|.+.|++++++.++|+|
T Consensus 2 ~~~kkVLIagrGeia~riiraa~elGi~vVav~s~~d~~s~~~~~ADe~~~ig~~~~~~~syld~~~Ii~~a~~~~~DaI 81 (1150)
T 3hbl_A 2 KQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAI 81 (1150)
T ss_dssp -CCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCGGGGTSSEEEECCTTSCTTGGGTCHHHHHHHHHHTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCcccchhhhhcceeeecCCCCCccccccCHHHHHHHHHHhCCCEE
Confidence 4689999999999999999999999999999999999999999999999999754 445789999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEE
Q 009323 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvK 227 (537)
||+|||++|++.+++.++++|++++||+++++..++||..+|++|+++|||+|+++...+.+.+++.++++++|||+|||
T Consensus 82 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iGyPvVVK 161 (1150)
T 3hbl_A 82 HPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMIK 161 (1150)
T ss_dssp ECTTTTSTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTCSSEEEE
T ss_pred EECCCcccccHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999995337888889888999999999999
Q ss_pred ecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeeccccccccee
Q 009323 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~ 307 (537)
|..|+||+|+++|++.+|+.++++.+.+++...|++..+++|+||+|++|++++++.|++|+++++++++|++++++++.
T Consensus 162 P~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a~~~fg~~~vlVEeyI~G~reieV~vl~d~~G~vv~l~er~~s~qr~~~k~ 241 (1150)
T 3hbl_A 162 ATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKV 241 (1150)
T ss_dssp CCC-------CEECCSSSCTHHHHSSSSSCC------CBEEECCCSSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEccCCCcEEEEEEEEeCCCCEEEEEeeccceeccCcee
Confidence 99999999999999999999999987766555677789999999999899999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcC
Q 009323 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 308 ~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G 387 (537)
.+.+|++.++++.+++|.+.+.++++++||.|++|+||+++++ ++||||||||+|++|+++++++|+|++++++++++|
T Consensus 242 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~vEflvd~d-~~y~iEINpR~~g~~~vte~~tGvDlv~~~i~ia~G 320 (1150)
T 3hbl_A 242 VEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVSGD-EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAG 320 (1150)
T ss_dssp EEESSCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETT-EEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTT
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEECC-eEEEEEEeCCCCCCcceeehhcCCCHHHHHHHHHCC
Confidence 9999998899999999999999999999999999999999977 599999999999999999999999999999999999
Q ss_pred CCCCC------CCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeee-ccCCCccCCCCCcccEEEEE
Q 009323 388 GKLRY------KQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSH-VYPDYVVPPSYDSLLGKLIV 460 (537)
Q Consensus 388 ~~l~~------~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~-~~~G~~v~~~~ds~ig~vi~ 460 (537)
.+++. .+.++..+||+++||+|+|||..+|.|++|+|+.+..|.++|+|+|.. ++.|+.|+++|||++|+||+
T Consensus 321 ~~L~~~~~~~~~q~~i~~~G~ai~~Ri~aedp~~~f~P~~G~i~~~~~p~~~gvr~d~~~~~~G~~v~~~yds~lakvi~ 400 (1150)
T 3hbl_A 321 ADLFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLST 400 (1150)
T ss_dssp CCTTSTTTCCCCGGGCCCCSEEEEEEECSEEGGGTSEECCCCCCEEECCCCTTEEEEESSCSSSCCCCTTSCCCSEEEEE
T ss_pred CCCCccccccccccccccceEEEEEEEeccCCccccCCCCceEEEEEcCCCCceeccccccccCCEeCCcCCCceeEEEE
Confidence 99875 456678899999999999999999999999999999999999999986 78999999999999999999
Q ss_pred EcCCHHHHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhcc
Q 009323 461 WAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQ 518 (537)
Q Consensus 461 ~g~~~~ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~ 518 (537)
+|+|+++|++++.+||++++|+|++||++||++||.||+|++|+++|+||+++.+.+.
T Consensus 401 ~g~~~~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~ 458 (1150)
T 3hbl_A 401 HAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFIEETPELFD 458 (1150)
T ss_dssp EESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHHCHHHHHSCCCTTHHHHCGGGGC
T ss_pred EeCCHHHHHHHHHHHHhceEEeCccCCHHHHHHHhCCHHHcCCCcccchhhCCHhhcc
Confidence 9999999999999999999999999999999999999999999999999999987764
No 7
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=100.00 E-value=1.5e-76 Score=686.31 Aligned_cols=459 Identities=41% Similarity=0.707 Sum_probs=366.0
Q ss_pred CCCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 68 ~~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
.+|+|||||+|+|+++++++++|+++|+++++++++.+..+.+.+++|+.+++++.+..++|.|.+.|++++++.++|+|
T Consensus 28 ~~m~kkILI~grGeia~~iiraar~lGi~vVaV~s~~d~~a~~~~~ADe~~~i~p~~~~~syld~~~Il~~a~~~~iDaI 107 (1236)
T 3va7_A 28 KKPFETVLIANRGEIAVRIMKTLKRMGIKSVAVYSDPDKYSQHVTDADFSVALHGRTAAETYLDIDKIINAAKKTGAQAI 107 (1236)
T ss_dssp CCSCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHHSSEEEECCCSSTTTTTTCHHHHHHHHHHTTCSEE
T ss_pred cCCCCEEEEEcCCHHHHHHHHHHHHCCCEEEEEEcCCCcCchhhhhCCEEEEeCCCcccccccCHHHHHHHHHHhCCCEE
Confidence 45789999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEE
Q 009323 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvK 227 (537)
+|+|||++|+..+++.+++.|++++||++++++.++||..+|++|+++|||+|+++ ..+.+.+++.++++++|||+|||
T Consensus 108 ~pg~g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~-~~v~s~eea~~~a~~iGyPvVVK 186 (1236)
T 3va7_A 108 IPGYGFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGS-GLIKDAKEAKEVAKKLEYPVMVK 186 (1236)
T ss_dssp ECCSSGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC--------------------------
T ss_pred EECCccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCee-EecCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999964 57889999999999999999999
Q ss_pred ecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeeccccccccee
Q 009323 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~ 307 (537)
|..|+||+||++|++.+|+.++++.+.+++...|++..++|||||+|++|++++++.|++|+++++++++|++++++++.
T Consensus 187 P~~GgGGkGV~iv~s~eEL~~a~~~~~~~a~~~~~~~~vlVEeyI~G~rEisV~vl~Dg~g~vv~l~~rd~s~qr~~~k~ 266 (1236)
T 3va7_A 187 STAGGGGIGLQKVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNNARHVEIQMMGDGFGKAIAIGERDCSLQRRNQKV 266 (1236)
T ss_dssp ----------------------------------------------CCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhccCCCcEEEeeccCCCeEEEEEEEecCCceEEEEeeeeeeeeecCcce
Confidence 99999999999999999999999998877767777889999999999899999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC-CCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHc
Q 009323 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE-RGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAM 386 (537)
Q Consensus 308 ~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~-~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~ 386 (537)
.+++|++.++++++++|.+.+.++++++||.|++++||++++ +|++||||||||++++++++++++|+|++++++++++
T Consensus 267 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~VEfivd~d~g~~y~iEINpRl~g~~~~te~vtGvDlv~~~l~~a~ 346 (1236)
T 3va7_A 267 IEETPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFIYDEQRDEFYFLEVNARLQVEHPITEMVTGLDLVEWMLRIAA 346 (1236)
T ss_dssp EEEESCSSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCcEEEEEEECCCCCccHHHHHHHCCCHHHHHHHHHC
Confidence 999999889999999999999999999999999999999996 4779999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHH
Q 009323 387 GGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRE 466 (537)
Q Consensus 387 G~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ 466 (537)
|.++++.+..+..+|+++++|+|+++|.++|.|++|.++.+..|. ++|++.+++.|++|+++||+++|+||++|+|++
T Consensus 347 G~~l~~~~~~~~~~g~Ai~~riyaedp~~~f~p~~G~i~~~~~p~--gvrvd~~v~~G~~V~~~yds~la~vi~~g~~r~ 424 (1236)
T 3va7_A 347 NDSPDFDNTKIEVSGASIEARLYAENPVKDFRPSPGQLTSVSFPS--WARVDTWVKKGTNVSAEYDPTLAKIIVHGKDRN 424 (1236)
T ss_dssp TCCCCGGGCCCCCCSEEEEEEEESEETTTTTEECCEECCEEECCT--TSEEEECCCTTCEECSSSCCEEEEEEEEESSHH
T ss_pred CCCCCCccccccccceEEEEEEecCCcccccCCCCceEEEEEcCC--ccEecccccCCCEeCCCCCCceEEEEEEeCCHH
Confidence 999887766677899999999999999999999999999998774 489999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhccCCcceee-----ccccccc
Q 009323 467 KAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQAPQKIVL-----ATTPNEM 532 (537)
Q Consensus 467 ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~~~-----~~~~~~~ 532 (537)
+|++++++++++++|+|++||++||++|+.||+|++|+++|+||+++.. .|..+.+ .||+.++
T Consensus 425 eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~---~~~~i~v~~~G~~ttvQD~ 492 (1236)
T 3va7_A 425 DAIMKLNQALNETAVYGCITNIDYLRSIASSKMFKEAKVATKVLDSFDY---KPCAFEVLAPGANTSVQDY 492 (1236)
T ss_dssp HHHHHHHHHHHTCEEESSCCSHHHHHHHHHCHHHHHTCCCTTGGGGCCC---CCSEEEEEECCSSCEEECS
T ss_pred HHHHHHHHHhhCEEEeCcccCHHHHHHHhCCHHHhCCCCcchhhhhcCc---CCCeeEEEcCCccchhhhc
Confidence 9999999999999999999999999999999999999999999998742 3443444 5666565
No 8
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=3.2e-74 Score=667.55 Aligned_cols=449 Identities=46% Similarity=0.771 Sum_probs=357.9
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCC-------CCCCCCCCHHHHHHHHHHc
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-------PSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~-------~~~~~~~~~~~i~~~a~~~ 142 (537)
|++||||+|||+++++++++|+++|+++++++++.+..+.+.++||+.+++++. ...++|+|.+.|++++++.
T Consensus 13 ~~~~~lianrGeia~riiraa~elGi~vvav~s~~d~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~~~ 92 (1165)
T 2qf7_A 13 PISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAKLS 92 (1165)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHHHH
T ss_pred cceEEEEcCCcHHHHHHHHHHHHcCCEEEEEECCCcccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHHHh
Confidence 689999999999999999999999999999999998888999999999998754 4556889999999999999
Q ss_pred CCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCC
Q 009323 143 GCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGF 222 (537)
Q Consensus 143 ~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~ 222 (537)
++|+|+|+|||++|++.+++.+++.|++++||+++++..++||..+|++|+++|||+|+++...+.+.+++.++++++||
T Consensus 93 ~iD~V~pg~g~lsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~igy 172 (1165)
T 2qf7_A 93 GADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAIGY 172 (1165)
T ss_dssp TCSEEECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC----------------------
T ss_pred CCCEEEECCCchhcCHHHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999842267889999999999999
Q ss_pred cEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeeccccc
Q 009323 223 PVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQR 302 (537)
Q Consensus 223 PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~ 302 (537)
|+||||..|+||+||++|++.+|+.++++.+.+++...|++..++||+||++++|++++++.|++|+++++++++|++++
T Consensus 173 PvVVKp~~g~GG~Gv~iv~s~eEL~~a~~~~~~~a~~~fg~~~vlVEefI~gg~EisV~vl~D~~G~vv~l~~r~~s~~r 252 (1165)
T 2qf7_A 173 PVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSVQR 252 (1165)
T ss_dssp -----------------------------------------------CCCSSEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEeccCCcEEEEEEEEcCCCcEEEEEeeccccee
Confidence 99999999999999999999999999999988776667777899999999977999999999999999999999999999
Q ss_pred ccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe-CCCCEEEEEEecCCCCccccchhhcCCCHHHHH
Q 009323 303 RNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD-ERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQ 381 (537)
Q Consensus 303 ~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~-~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~ 381 (537)
++++..+.+|++.++++.++++.+.+.++++++||.|++++||+++ ++|++||||||||+++++++++.++|+|+++++
T Consensus 253 ~~~~~~e~~Pa~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~vd~~dg~~~~iEiNpR~~~~~~vte~~tGiDl~~~~ 332 (1165)
T 2qf7_A 253 RNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYLMDADTGKFYFIEVNPRIQVEHTVTEVVTGIDIVKAQ 332 (1165)
T ss_dssp TTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHH
T ss_pred cccceEEecccccCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEECCCCCEEEEEEEcCCCCCchhhhhhhCCCHHHHH
Confidence 9999999999988999999999999999999999999999999999 888899999999999999999999999999999
Q ss_pred HHHHcCCCCCC------CCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeec-cCCCccCCCCCcc
Q 009323 382 IHVAMGGKLRY------KQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHV-YPDYVVPPSYDSL 454 (537)
Q Consensus 382 i~~a~G~~l~~------~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~-~~G~~v~~~~ds~ 454 (537)
+++++|.+++. .+.++..+||+++||+++|+|..+|.|++|+|+.+..+.++++|++.++ ++|+.|+++||++
T Consensus 333 i~~a~G~~l~~~~~g~p~q~~~~~~g~Ai~~ri~ae~P~~~f~p~~G~I~~~~~~~~~gvrvd~g~~~~G~~v~~~~d~~ 412 (1165)
T 2qf7_A 333 IHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDPEHNFIPDYGRITAYRSASGFGIRLDGGTSYSGAIITRYYDPL 412 (1165)
T ss_dssp HHHHTTCCTTSGGGTCCCGGGCCCCSEEEEEEEESEETTTTTEECCEECCEEECCCCTTEEEECCSCCTTCEECSSSCCE
T ss_pred HHHHcCCCccccccccccccccccCcEEEEEEEEecCCccCcCCCCcEEEEEecCCCCceEeeeccCCCCCEeCCCCCCc
Confidence 99999998753 2334567899999999999999999999999999988877899999776 6899999999999
Q ss_pred cEEEEEEcCCHHHHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhcc
Q 009323 455 LGKLIVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQELQ 518 (537)
Q Consensus 455 ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~ 518 (537)
+|+|+++|+|+++|++++++++++++|+|+.|||+||+.+|.||+|.+|+++|+||+++.+.+.
T Consensus 413 l~~vi~~g~t~~eA~~~~~~al~~i~i~G~~tni~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~ 476 (1165)
T 2qf7_A 413 LVKVTAWAPNPLEAISRMDRALREFRIRGVATNLTFLEAIIGHPKFRDNSYTTRFIDTTPELFQ 476 (1165)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHTSHHHHTTCCCTTTTTTCGGGGC
T ss_pred eEEEEEEeCCHHHHHHHHHHHhhcEEEecccCCHHHHHHHhcCHHhhcCCccchhhhcChhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999876653
No 9
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=100.00 E-value=1.4e-72 Score=601.68 Aligned_cols=447 Identities=54% Similarity=0.927 Sum_probs=415.3
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
||||||+|+|+++.+++++|+++|+++++++++.+..+++.+++|+.+.+++.....+|.|.+.+++++++.++|+|+|+
T Consensus 1 ~k~ilI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 80 (451)
T 2vpq_A 1 MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPG 80 (451)
T ss_dssp -CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHTTCSEEECC
T ss_pred CceEEEeCCCHHHHHHHHHHHHcCCEEEEEecccccccchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEEC
Confidence 57999999999999999999999999999998888888889999999988766666789999999999999999999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecC
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~ 230 (537)
+|+++|++.+++.++..|++++||+++++..++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||||..
T Consensus 81 ~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~ 160 (451)
T 2vpq_A 81 YGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATA 160 (451)
T ss_dssp SSTTTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEETT
T ss_pred CCccccCHHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcCCcEEEEECC
Confidence 99999998899999999999999999999999999999999999999999973226889999999999999999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEEE
Q 009323 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEE 310 (537)
Q Consensus 231 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~~ 310 (537)
|+||+||+++++.+|+.++++.+..++...|++..+++|+||+|++|++++++.+++|+++.+++++|++++++++..+.
T Consensus 161 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 240 (451)
T 2vpq_A 161 GGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE 240 (451)
T ss_dssp CCTTCSEEEESSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCSEEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCeEEEEEEEEcCCCCEEEEeccccchhccccceEEE
Confidence 99999999999999999999998876656677789999999999789999999998899999999999888888888899
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe-CCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCC
Q 009323 311 APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD-ERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 311 ~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~-~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~ 389 (537)
+|++.++++..+++.+.+.++++++||.|++++||+++ ++|++||+|||||+++++++++.++|+|++++++++++|.+
T Consensus 241 ~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~~ 320 (451)
T 2vpq_A 241 APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGDV 320 (451)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCCEEEEEeeCCCCCceehhhHHhCCCHHHHHHHHHCCCC
Confidence 99987999999999999999999999999999999999 88899999999999999999999999999999999999999
Q ss_pred CCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHHH
Q 009323 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAI 469 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~ 469 (537)
++..+.++...++++++++|+++|.+.|.|.+|.++.+..+..++++++.+++.|+.+++.+++++|+|+++|+|+++|+
T Consensus 321 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ea~ 400 (451)
T 2vpq_A 321 LPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLAPGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAI 400 (451)
T ss_dssp CSCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCSEEECCCSTTEEEECCCCTTCBCCTTTCCEEEEEEEEESSHHHHH
T ss_pred CCCcccccCcCceEeeeEeeeeccccccCCCCCEEeEEECCCCCCcccccccccCCccCcccccccEEEEEEeCCHHHHH
Confidence 87655556678899999999999988899999999988777778899999999999998899999999999999999999
Q ss_pred HHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhc
Q 009323 470 ERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (537)
Q Consensus 470 ~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 517 (537)
++++++++.+.|+|++||++||+.++.||+|++|+++|+||++++..+
T Consensus 401 ~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (451)
T 2vpq_A 401 MAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIMN 448 (451)
T ss_dssp HHHHHHHHTCEEESSCCSHHHHHHHHTCHHHHHTCCCTTTTTTSCTTC
T ss_pred HHHHHHHhccEEeCcCCCHHHHHHHhCCHhhhcCCCccHHHhhhhhhh
Confidence 999999999999999999999999999999999999999999986554
No 10
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=2.1e-72 Score=600.34 Aligned_cols=447 Identities=53% Similarity=0.883 Sum_probs=415.1
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
|+|||||+|+|+++.+++++|+++|+++++++++.+..+++.+++|+.+.+++. ...+|.|.+.+++++++.++|+|+|
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~-~~~~~~d~~~l~~~~~~~~~d~v~~ 79 (451)
T 1ulz_A 1 MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTD-PLDTYLNKQRIINLALEVGADAIHP 79 (451)
T ss_dssp CCSSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECCSS-TTHHHHCHHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCcHHHHHHHHHHHHcCCeEEEEechhhcccchhhhCcEEEEcCCC-cccccCCHHHHHHHHHHcCCCEEEE
Confidence 678999999999999999999999999999998888888889999999988654 5567899999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEec
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~ 229 (537)
++|+++|++.+++.++..|++++||+++++..++||..+|++|+++|||+|+++...+.+.+++.++++++|||+||||.
T Consensus 80 ~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~ 159 (451)
T 1ulz_A 80 GYGFLAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVLLKAT 159 (451)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHCSSEEEEEC
T ss_pred CCCccccCHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcCCCEEEEEC
Confidence 99999999988999999999999999999999999999999999999999998312688999999999999999999999
Q ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEE
Q 009323 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~ 309 (537)
.|+||+||+++++.+|+.++++.+...+...|++..+++|+||+|++|++++++.+.+|++++++.++|++++++++..+
T Consensus 160 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (451)
T 1ulz_A 160 AGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENPKHIEYQVLGDKHGNVIHLGERDCSIQRRNQKLVE 239 (451)
T ss_dssp SSSSCCSCEEESSHHHHHHHHHHHHHHHHHTTSCCCEEEEECCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEE
T ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCeEEEEEEEEcCCCCEEEEeeeeccccccccccee
Confidence 99999999999999999999999887766677778999999999988999999999889999999888888888888888
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCC
Q 009323 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 310 ~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~ 389 (537)
.+|++.++++..+++.+.+.++++++||.|++++||+++++|++||+|||||+++++++++.++|+|++++++++++|.+
T Consensus 240 ~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~~ 319 (451)
T 1ulz_A 240 IAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEFIADQEGNLYFIEMNTRIQVEHPVSEMVTGIDIVKWQIKIAAGEP 319 (451)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTCC
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeCCCCEEEEEeeCCCCccchHHHHHhCCCHHHHHHHHHcCCC
Confidence 89987799999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred CCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHHH
Q 009323 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAI 469 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~ 469 (537)
+++.+..+...++++++++|+++|...|.|.+|++..+..|..++++++.+++.|+.+++++|+++|+|+++|+|+++|+
T Consensus 320 l~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ea~ 399 (451)
T 1ulz_A 320 LTIKQEDVKFNGYAIECRINAEDPKKNFAPSTRVIERYYVPGGFGIRVEHAAARGFEVTPYYDSMIAKLITWAPTWDEAV 399 (451)
T ss_dssp CCCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCCSEECCCSTTEEEEECCCTTCBCCSSSCCEEEEEEEEESSHHHHH
T ss_pred CCCccccCCCceEEEEEeccccCcccCcCCCCceeceEECCCCCCcccccCccCCCEecccccchheEEEEECCCHHHHH
Confidence 87655455667899999999999988899999999988777678899999999999999999999999999999999999
Q ss_pred HHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchhhc
Q 009323 470 ERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQEL 517 (537)
Q Consensus 470 ~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~ 517 (537)
++++++++.+.++|..|||++|+.+|.||+|++|+++|+||+++++.+
T Consensus 400 ~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
T 1ulz_A 400 ERMRAALETYEITGVKTTIPLLINIMKEKDFKAGKFTTKYLEEHPEVF 447 (451)
T ss_dssp HHHHHHHHTCEECSSCCSHHHHHHHHHCHHHHHTCCCTTTTTTCGGGG
T ss_pred HHHHHHHhhcEEeCccCCHHHHHHHhCCHHHhcCCCcchhhhhhHhhc
Confidence 999999999999999999999999999999999999999999987655
No 11
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=100.00 E-value=2.5e-71 Score=593.63 Aligned_cols=449 Identities=47% Similarity=0.785 Sum_probs=410.6
Q ss_pred cCCCCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCC-CCCCCCCCHHHHHHHHHHcCC
Q 009323 66 KVTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA-PSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 66 ~~~~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~-~~~~~~~~~~~i~~~a~~~~~ 144 (537)
|..+|+|||||+|+|+++.+++++|+++|+++++++++++..+++.+++|+.+.+++. ...++|.|.+.|++++++.++
T Consensus 1 m~~~~~k~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~i 80 (461)
T 2dzd_A 1 METRRIRKVLVANRGEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDV 80 (461)
T ss_dssp --CCCCSEEEECSCHHHHHHHHHHHHHHTCEEEEEECGGGTTCTHHHHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTC
T ss_pred CCCCcCcEEEEECCcHHHHHHHHHHHHcCCEEEEEECCcccccchhhhCCEEEEcCCCCCccccccCHHHHHHHHHHhCC
Confidence 5667899999999999999999999999999999998888778889999999988642 334568999999999999999
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcE
Q 009323 145 TMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPV 224 (537)
Q Consensus 145 d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~Pv 224 (537)
|+|+|++|+++|++.+++.+++.|++++||+++++..++||..+|++|+++|||+|+++...+.+.+++.++++++|||+
T Consensus 81 d~v~~~~g~~~E~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~Pv 160 (461)
T 2dzd_A 81 DAIHPGYGFLSENIQFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHGYPI 160 (461)
T ss_dssp CEEECCSSSSTTCHHHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHCSCE
T ss_pred CEEEECCCccccCHHHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcCCcE
Confidence 99999999999999899999999999999999999999999999999999999999983226889999999999999999
Q ss_pred EEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeeccccccc
Q 009323 225 MIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRN 304 (537)
Q Consensus 225 vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~ 304 (537)
||||..|+||+||+++++.+|+.++++.+..++...|++..+++|+||+|++|++++++.+++|+++.+.+++|+.++++
T Consensus 161 vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~ 240 (461)
T 2dzd_A 161 IIKAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSDEVYVEKLIENPKHIEVQILGDYEGNIVHLYERDCSVQRRH 240 (461)
T ss_dssp EEEESTTCSSSSEEEECCGGGHHHHHHHHHHHHHHHTSCCCEEEEECCCSCEEEEEEEEECTTCCEEEEEEEEEEEEETT
T ss_pred EEEeCCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEECCCCCeEEEEEEEEcCCCCEEEEEeccccccccc
Confidence 99999999999999999999999999998877666677789999999999889999999998899998888888888888
Q ss_pred ceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHH
Q 009323 305 QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 305 ~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~ 384 (537)
++..+.+|++.++++..+++.+.+.++++++|+.|.+++||++++ |++||+|||||+++++++++.++|+|+++.++++
T Consensus 241 ~~~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~g~~~ve~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~ 319 (461)
T 2dzd_A 241 QKVVEVAPSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEFLVSG-DEFYFIEVNPRIQVEHTITEMITGIDIVQSQILI 319 (461)
T ss_dssp EEEEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEET-TEEEEEEEESSCCGGGHHHHHHHCCCHHHHHHHH
T ss_pred cceEEECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeC-CCEEEEEEECCCCCceeeEEeecCCCHHHHHHHH
Confidence 889999999779999999999999999999999999999999998 6699999999999999899999999999999999
Q ss_pred HcCCCCCCC------CCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeec-cCCCccCCCCCcccEE
Q 009323 385 AMGGKLRYK------QEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHV-YPDYVVPPSYDSLLGK 457 (537)
Q Consensus 385 a~G~~l~~~------~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~-~~G~~v~~~~ds~ig~ 457 (537)
++|.+++.. +..+...|+++++|+++++|...|.|++|.+..+..+.+++++++..+ ..|++|+++||+++|+
T Consensus 320 ~~G~~l~~~~~~~~~~~~~~~~g~~~~~ri~~~~~~~~~~p~~g~i~~~~~~~~~~v~~~~~~~~~G~~i~~~~~~~~~~ 399 (461)
T 2dzd_A 320 ADGCSLHSHEVGIPKQEDIRINGYAIQSRVTTEDPLNNFMPDTGKIMAYRSGGGFGVRLDAGNGFQGAVITPYYDSLLVK 399 (461)
T ss_dssp HTTCCTTSTTTCCCCGGGCCCCSEEEEEEEESEEGGGTTEECCEECSEEECCCCTTEEEEESSCSTTCEECSSSCCEEEE
T ss_pred HcCCCccccccccccccccccceeEEEeeecccCCccCccCCCCeeeEEecCCCCCeEeecccccCCCCcCcccchhhhe
Confidence 999988532 122456799999999999998889899999999988878889987764 7999999999999999
Q ss_pred EEEEcCCHHHHHHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchh
Q 009323 458 LIVWAPTREKAIERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQ 515 (537)
Q Consensus 458 vi~~g~~~~ea~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~ 515 (537)
|+++|+|+++|+++++++++.+.|+|+.|||+++..++.||+|++|+++|+||+++.+
T Consensus 400 v~~~g~~~~~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (461)
T 2dzd_A 400 LSTWALTFEQAARKMLRNLREFRIRGIKTNIPFLENVVQHPKFLSGEYDTSFIDTTPE 457 (461)
T ss_dssp EEEEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHSHHHHTSCCCTTHHHHCGG
T ss_pred eEEEcCCHHHHHHHHHHHHHhcEEeCCcCCHHHHHHHhCChhhhCCCccchhhhcchh
Confidence 9999999999999999999999999999999999999999999999999999998754
No 12
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=100.00 E-value=3.6e-71 Score=604.09 Aligned_cols=444 Identities=33% Similarity=0.549 Sum_probs=401.2
Q ss_pred cCCCCCcEEEEEcCcHHHHHHHHHHHHcC---------CCEEEEecCC--CCCChhhhccCEEEEcCCCCCCCCCCCHHH
Q 009323 66 KVTCRQEKILVANRGEIAVRVIRTAHEMG---------IPCVAVYSTI--DKDALHVKLADESVCIGEAPSSQSYLLIPN 134 (537)
Q Consensus 66 ~~~~~~~kvLi~g~g~~a~~ii~aa~~~G---------~~vv~v~~~~--d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~ 134 (537)
++.+|+|||||+|+|+++++++++|+++| ++++++++.. +..+++.++||+++.+++....++|.|.+.
T Consensus 42 ~~~~~~kkILI~g~g~~a~~iira~~~~G~~vi~~d~gi~~v~v~s~~D~~~~~~~~~~aD~~~~ip~~~~~~~y~d~~~ 121 (554)
T 1w96_A 42 GGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDL 121 (554)
T ss_dssp TCCBCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHH
T ss_pred CCcccccEEEEECCCHHHHHHHHHHHHcCCcceecccCceEEEEecccccccCChhhhhCCEEEEcCCCCccccccCHHH
Confidence 44568999999999999999999999994 5667777633 477888999999999876666678999999
Q ss_pred HHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCC--CceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCc-------
Q 009323 135 VLSAAISRGCTMLHPGYGFLAENAVFVEMCREHG--INFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG------- 205 (537)
Q Consensus 135 i~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~g--i~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~------- 205 (537)
|++++++.++|+|+|++||++|++.++..++++| ++++||+++++..++||..++++|+++|||+|++...
T Consensus 122 l~~~a~~~~id~Vi~g~G~~sE~~~~~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~ 201 (554)
T 1w96_A 122 IVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHV 201 (554)
T ss_dssp HHHHHHHTTCSEEECCSSTTTTCTHHHHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEE
T ss_pred HHHHHHHhCCCEEEECCCccccCHHHHHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccc
Confidence 9999999999999999999999988889999999 9999999999999999999999999999999998421
Q ss_pred -----------------cCCCHHHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 009323 206 -----------------LLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYL 268 (537)
Q Consensus 206 -----------------~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lv 268 (537)
.+.+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+..++ .+..++|
T Consensus 202 ~~~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g~PvVvKp~~g~gg~Gv~~v~~~~el~~a~~~~~~~~----~~~~vlv 277 (554)
T 1w96_A 202 DEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEI----PGSPIFI 277 (554)
T ss_dssp CTTTCCEECCHHHHGGGSCSSHHHHHHHHHHHCSSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHHS----TTCCEEE
T ss_pred cccccccccccccccccCCCCHHHHHHHHHHcCCCEEEEECCCCCCceEEEECCHHHHHHHHHHHHhhc----cCCCEEE
Confidence 1378899999999999999999999999999999999999999999887653 2478999
Q ss_pred EeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe
Q 009323 269 EKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD 348 (537)
Q Consensus 269 Ee~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~ 348 (537)
|+||+|++|++++++.|++|+++.+..++|++++++++..+.+|++.++++..+++.+++.++++++||.|++++||+++
T Consensus 278 Ee~i~g~~e~sv~vl~d~~G~vv~l~~~~~~~~~~~~k~~~~~P~~~l~~~~~~~i~~~a~~~~~alg~~G~~~ve~~~~ 357 (554)
T 1w96_A 278 MKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYS 357 (554)
T ss_dssp EECCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEC
T ss_pred EEecCCCcEEEEEEEEcCCCCEEEEeeeeeeeEeeccceeeeCCCcCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEE
Confidence 99999879999999999889999999999999998888888899877899999999999999999999999999999998
Q ss_pred -CCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCCCCCC-----------------------------CCccc
Q 009323 349 -ERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLRYK-----------------------------QEDIV 398 (537)
Q Consensus 349 -~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~l~~~-----------------------------~~~~~ 398 (537)
++|++||+|||||++++++++++++|+|++++++++++|.+++.. +..+.
T Consensus 358 ~~dg~~~~iEiN~R~~g~~~~~~~~~G~dl~~~~~~~a~G~~l~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~ 437 (554)
T 1w96_A 358 HDDGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPI 437 (554)
T ss_dssp TTTCCEEEEEEECSCCTTTHHHHHHHCCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCTTCCSHHHHHHCCCCC
T ss_pred CCCCCEEEEEeeCCCCcceehhhhhcCCCHHHHHHHHHcCCCcccccchhhhccCCccccccccccccccccccccccCC
Confidence 788899999999999999999999999999999999999987421 11345
Q ss_pred cceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHHHHHHHHhhhc
Q 009323 399 LQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALND 478 (537)
Q Consensus 399 ~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~ 478 (537)
..|+++++|+++++|.++|.|.+|++..+..+..++++++..+.+|+.|+++||+++|+|+++|+|+++|++++.+++++
T Consensus 438 ~~g~~i~~r~~~~~~~~~~~p~~G~i~~~~~~~~~~v~~~~~~~~g~~i~~~~~~~~~~vi~~g~~~~eA~~~~~~al~~ 517 (554)
T 1w96_A 438 PKGHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKE 517 (554)
T ss_dssp CCSEEEEEEEEEECCCCSSCCCSSSEEEECCSSCSSEEEEEEECCSCSSCSSCSEEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEccCCCCCcccCCeEEeEEecCCCCCEEEeeecccCCccCCCCCCceEEEEEEeCCHHHHHHHHHHHHhc
Confidence 67999999999999999999999999988767678888888899999999999999999999999999999999999999
Q ss_pred ceEee-eccCHHHHHHhcCCccccCCcccccccccc
Q 009323 479 TIITG-VPTTIEYHKLILDVEDFKNGKVDTAFIPKH 513 (537)
Q Consensus 479 ~~i~g-~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 513 (537)
+.|+| +.||++||+.||.||+|++|+++|+||++.
T Consensus 518 i~i~g~~~~~i~~~~~~~~~~~f~~~~~~t~~~~~~ 553 (554)
T 1w96_A 518 LSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDL 553 (554)
T ss_dssp HTTCC----CCHHHHHHHTSHHHHTTCCCTTHHHHH
T ss_pred cEEEeeccCCHHHHHHHhcCHhhhcCCccchHhhhh
Confidence 99999 999999999999999999999999999863
No 13
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=100.00 E-value=6.5e-71 Score=588.48 Aligned_cols=444 Identities=53% Similarity=0.917 Sum_probs=410.6
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
|||||||+|+|+++.+++++|+++|+++++++++.+..+++.+++|+.+.+++....++|.|.+.+++++++.++|+|+|
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~ 80 (449)
T 2w70_A 1 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHP 80 (449)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEEC
T ss_pred CCceEEEeCCcHHHHHHHHHHHHcCCeEEEEeccccccCchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEE
Confidence 67999999999999999999999999999998887888888999999998765566678999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHH-HHHHHHhCCcEEEEe
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA-VKLADELGFPVMIKA 228 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~-~~~~~~ig~PvvvKp 228 (537)
++|+++|++.+++.+++.|++++||+++++..++||..+|++|+++|||+|+++...+.+.+++ .++++++|||+||||
T Consensus 81 ~~g~~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g~PvvvKp 160 (449)
T 2w70_A 81 GYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA 160 (449)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEEEEE
T ss_pred CCCCcccCHHHHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhCCcEEEEE
Confidence 9999999988899999999999999999999999999999999999999999832267888999 899999999999999
Q ss_pred cCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeE
Q 009323 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 229 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~ 308 (537)
..|+||+||++|++.+|+.++++.+...+...|++..+++|+||+|++|++++++.+.+|++++++.++|+.++.+++..
T Consensus 161 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 240 (449)
T 2w70_A 161 SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV 240 (449)
T ss_dssp TTCCTTTTCEEECSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEeccCCCeEEEEEEEEcCCCCEEEEeceecccccCCccee
Confidence 99999999999999999999999888766666777899999999998899999999988999999988888888888888
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCC
Q 009323 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 ~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~ 388 (537)
+.+|++.++++..+++.+.+.++++++||.|++++||++++ |++||+|||||+++++++++.++|+|++++++++++|.
T Consensus 241 ~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~ 319 (449)
T 2w70_A 241 EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFEN-GEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQ 319 (449)
T ss_dssp EEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHHTC
T ss_pred eeCCcccCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEC-CCEEEEEEECCCCccchHHHHHhCCCHHHHHHHHHCCC
Confidence 89998779999999999999999999999999999999998 56999999999999999999999999999999999999
Q ss_pred CCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHH
Q 009323 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
++++.+.++...++++++++|++++ ..|.|.+|.+..+..+..++++++.+++.|+.+++.+++++|+|+++|+|+++|
T Consensus 320 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~v~~~g~~~~~a 398 (449)
T 2w70_A 320 PLSIKQEEVHVRGHAVECRINAEDP-NTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVA 398 (449)
T ss_dssp CCSSCGGGCCCCSEEEEEEEECBCT-TTCCBCCEECCEEECCCSTTEEEECCCCTTCEECSSSCSEEEEEEEEESSHHHH
T ss_pred CCCCchhccccceeEEEEeecccCc-cccCCCCCEeceEECCCCCcEEEEeccccCCEeccccCcceEEEEEEcCCHHHH
Confidence 9876554556678999999999999 889999999998877777889999999999999988999999999999999999
Q ss_pred HHHHHHhhhcceEeeeccCHHHHHHhcCCccccCCcccccccccchh
Q 009323 469 IERMKRALNDTIITGVPTTIEYHKLILDVEDFKNGKVDTAFIPKHEQ 515 (537)
Q Consensus 469 ~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~ 515 (537)
+++++++++.+.++|..|||.+|+.+|.||+|++|+++|+||++++.
T Consensus 399 ~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (449)
T 2w70_A 399 IARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLG 445 (449)
T ss_dssp HHHHHHHHHHCEEESSCCSHHHHHHHHTCHHHHHCCCCTTHHHHHHT
T ss_pred HHHHHHHHhhcEEeCcCCCHHHHHHHHcChhhccCCceehhhhhhhh
Confidence 99999999999999999999999999999999999999999998643
No 14
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=100.00 E-value=5.8e-54 Score=451.26 Aligned_cols=386 Identities=15% Similarity=0.205 Sum_probs=323.0
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
++++||||+|+|+++.+++++|+++|+++++++ ..+.++++.+++|+.+.++ +.|.+.+++++++.++|+|+
T Consensus 5 ~~~~~ilI~g~g~~~~~~~~a~~~~G~~~v~v~-~~~~~~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~v~ 76 (403)
T 4dim_A 5 YDNKRLLILGAGRGQLGLYKAAKELGIHTIAGT-MPNAHKPCLNLADEISYMD-------ISNPDEVEQKVKDLNLDGAA 76 (403)
T ss_dssp -CCCEEEEECCCGGGHHHHHHHHHHTCEEEEEE-CSSCCHHHHHHCSEEEECC-------TTCHHHHHHHTTTSCCSEEE
T ss_pred cCCCEEEEECCcHhHHHHHHHHHHCCCEEEEEc-CCCCCCcchhhCCeEEEec-------CCCHHHHHHHHHHcCCCEEE
Confidence 346899999999999999999999999999995 3455678899999999874 78899999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEe
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp 228 (537)
|+ ++..+...++++++++|+ +||+++++..++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||
T Consensus 77 ~~-~~~~~~~~~a~~~~~~gl--~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp 151 (403)
T 4dim_A 77 TC-CLDTGIVSLARICDKENL--VGLNEEAAIMCGDKYKMKEAFKKYNVNTARH--FVVRNENELKNALENLKLPVIVKA 151 (403)
T ss_dssp CC-SCSTTHHHHHHHHHHHTC--SSCCHHHHHHHHCHHHHHHHHHHHTCCCCCE--ECCCSHHHHHHHHHTSCSSEEEEC
T ss_pred eC-CcchhHHHHHHHHHHcCc--CCCCHHHHHHHhCHHHHHHHHHHcCCCCCCE--EEeCCHHHHHHHHhcCCCCEEEEE
Confidence 96 566677788899999998 4899999999999999999999999999999 678999999999999999999999
Q ss_pred cCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeeccc--ccccce
Q 009323 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSI--QRRNQK 306 (537)
Q Consensus 229 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~--~~~~~~ 306 (537)
..|+||+|++++++.+|+.++++.+...+ .+..+++|+||+| .|+++.++.. +|++..+...+... ..+...
T Consensus 152 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~----~~~~~lvEe~i~g-~e~sv~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 225 (403)
T 4dim_A 152 TDLQGSKGIYIAKKEEEAIDGFNETMNLT----KRDYCIVEEFIEG-YEFGAQAFVY-KNDVLFVMPHGDETYMSHTAVP 225 (403)
T ss_dssp SCC-----CEEESSHHHHHHHHHHHHHHC----SSSCCEEEECCCS-EEEEEEEEEE-TTEEEEEEEEEEEEEESSSEEE
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHhcC----cCCcEEEEEccCC-cEEEEEEEEE-CCEEEEEEEecceeccCCCCcc
Confidence 99999999999999999999999887653 3478999999999 8999999975 56777654332111 111222
Q ss_pred eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcc-eeEEEEEEeCCCCEEEEEEecCCCCcc--ccchhhcCCCHHHHHHH
Q 009323 307 LLEEAPSPALTPELRKAMGDAAVAAAASIGYIG-VGTVEFLLDERGSFYFMEMNTRIQVEH--PVTEMISSVDLIEEQIH 383 (537)
Q Consensus 307 ~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G-~~~vEf~~~~~g~~~~lEiNpR~~g~~--~~~~~~~Gidl~~~~i~ 383 (537)
.....|+. ++++..+++.+++.++++++|+.| ++|+||+++ +|++||+|||||+++++ .+++.++|+|+++++++
T Consensus 226 ~~~~~p~~-l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve~~~~-~~~~~~iEiN~R~~~~~~~~~~~~~~G~d~~~~~~~ 303 (403)
T 4dim_A 226 VGHYVPLD-VKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILK-DNEVYIIELTGRVGANCLPELVEINYGIEYYKMIAS 303 (403)
T ss_dssp EEEEESCC-SCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEE-TTEEEEEEEESSCCSTTHHHHHHHHHTSCHHHHHHH
T ss_pred eeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEEE-CCcEEEEEEcCCCCCCcHHHHHHHHhCcCHHHHHHH
Confidence 34456776 999999999999999999999996 999999998 46699999999999875 47889999999999999
Q ss_pred HHcCCCC-CCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCe--E-EEeeeccCCCccCCCCCc--ccEE
Q 009323 384 VAMGGKL-RYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPF--V-RMDSHVYPDYVVPPSYDS--LLGK 457 (537)
Q Consensus 384 ~a~G~~l-~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~--v-r~~~~~~~G~~v~~~~ds--~ig~ 457 (537)
+++|.++ ++.+......+ +..++++. |.|.+|+++.+..+..++ + .++.++++|+.|+++||+ ++|+
T Consensus 304 ~~~G~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~G~i~~~~~~~~~~~~v~~~~~~~~~G~~v~~~~d~~~~~g~ 376 (403)
T 4dim_A 304 MAISENPLVFWSQKSKENK-AGLARMII------ETEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDCIGQ 376 (403)
T ss_dssp HHTTCCTHHHHTTCCSSCC-EEEEEEEC------CSSCCEEEEEEEECCCCCTTEEEEEECCCTTCEECCSCSGGGCCEE
T ss_pred HHcCCCccccccccccccc-cceEEEEE------ecCCCeEEEeeecccccCCCeEEEEEEcCCCCEeCCCCCCCceeEE
Confidence 9999988 44433333344 35678763 678899999986554333 3 357889999999999999 9999
Q ss_pred EEEEcCCHHHHHHHHHHhhhcceEe
Q 009323 458 LIVWAPTREKAIERMKRALNDTIIT 482 (537)
Q Consensus 458 vi~~g~~~~ea~~~~~~al~~~~i~ 482 (537)
|+++|+|+++|+++++++++.++|+
T Consensus 377 vi~~~~~~~~a~~~~~~~~~~~~i~ 401 (403)
T 4dim_A 377 IIVKEETLDKCKDKLDVIINNINII 401 (403)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEEEE
T ss_pred EEEEeCCHHHHHHHHHHHhccEEEE
Confidence 9999999999999999999999886
No 15
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=100.00 E-value=4.2e-50 Score=424.85 Aligned_cols=388 Identities=14% Similarity=0.173 Sum_probs=310.6
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCC----HHHHHHHHHHcCCCE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLL----IPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~----~~~i~~~a~~~~~d~ 146 (537)
.|+|+|+|++.....++++|+++|++|++++++++..+.+...+|+.+.++ .+.| .+.+.+++++.++|+
T Consensus 5 ~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~------~~~d~~~~~~~~~~~~~~~~id~ 78 (425)
T 3vot_A 5 NKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLP------LFEDEEAAMDVVRQTFVEFPFDG 78 (425)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEEC------TTTCHHHHHHHHHHHHHHSCCSE
T ss_pred CcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecC------CCCCHHHHHHHHHHhhhhcCCCE
Confidence 589999999999999999999999999999988888777888899988875 2444 345666777889999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEE
Q 009323 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMI 226 (537)
Q Consensus 147 V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~Pvvv 226 (537)
|+|..++ .....+.+++.+|++ ||+++++..++||..+|++|+++|||+|++ ..+++.+++.. +++|||+||
T Consensus 79 V~~~~e~--~~~~~a~l~e~lglp--g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~--~~~g~P~vv 150 (425)
T 3vot_A 79 VMTLFEP--ALPFTAKAAEALNLP--GLPFTTMENCRNKNKTRSILQQNGLNTPVF--HEFHTLADLEN--RKLSYPLVV 150 (425)
T ss_dssp EECCCGG--GHHHHHHHHHHTTCS--SCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEESSGGGGTT--CCCCSSEEE
T ss_pred EEECCch--hHHHHHHHHHHcCCC--CCCHHHHHHhhCHHHHHHHHHHCCCCCCce--eccCcHHHHHH--hhcCCcEEE
Confidence 9987653 224556778888886 899999999999999999999999999998 67888887643 578999999
Q ss_pred EecCCCCCccEEEeCCHHHHHHHHHHHHHHHHH-----hcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEE--Eeeeecc
Q 009323 227 KATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAA-----AFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVH--FGERDCS 299 (537)
Q Consensus 227 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~-----~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~--~~~r~~~ 299 (537)
||..|+||+||++|++.+|+.++++++...... ..++..+++|+||+| +|++++++.+ +|++.. +..+.+.
T Consensus 151 Kp~~g~gs~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i~G-~e~sv~~~~~-~g~~~~~~~~~~~~~ 228 (425)
T 3vot_A 151 KPVNGFSSQGVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFIDG-PEFAIETLSI-QGNVHVLSIGYKGNS 228 (425)
T ss_dssp EESCC-----CEEECSHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECCCS-CEEEEEEEEE-TTEEEEEEEEEEECC
T ss_pred EECCCCCCCCceEechHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEecC-cEEEEEEEEe-CCcEEEEeEEEEecc
Confidence 999999999999999999999999988654321 124578999999999 8999999976 445544 4455555
Q ss_pred cccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCc-ceeEEEEEEeCCCCEEEEEEecCCCCc---cccchhhcCC
Q 009323 300 IQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYI-GVGTVEFLLDERGSFYFMEMNTRIQVE---HPVTEMISSV 375 (537)
Q Consensus 300 ~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~-G~~~vEf~~~~~g~~~~lEiNpR~~g~---~~~~~~~~Gi 375 (537)
....+.......|++ ++++..+++.+.+.++++++|+. |++|+||+++++|++||+|||||++|+ +.+++.++|+
T Consensus 229 ~~~~~~~~~~~~Pa~-l~~~~~~~i~~~~~~~~~alg~~~G~~~ve~~~~~dG~~~~iEiN~R~gG~~~~~~l~~~~~G~ 307 (425)
T 3vot_A 229 KGPFFEEGVYIAPAQ-LKEETRLAIVKEVTGAVSALGIHQGPAHTELRLDKDGTPYVIEVGARIGGSGVSHYIVKESTGI 307 (425)
T ss_dssp CCSBCCCCEEEESCC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEECTTCCEEEEEEESSCGGGGHHHHHHHHHHCC
T ss_pred CCCccccceEeeccc-CCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEEEeCCcEEEEEEecCCCCCCchHHHHHHHHCC
Confidence 555566677788987 99999999999999999999997 999999999999999999999999875 4578899999
Q ss_pred CHHHHHHHHHcCCCCCCCC-CccccceeEEEEEEeeCCCCCCCCCCCCceeEEE----cCCCCeE-EEeeeccCCCccCC
Q 009323 376 DLIEEQIHVAMGGKLRYKQ-EDIVLQGHSIECRINAEDPFKNFRPGPGRITAYL----PAGGPFV-RMDSHVYPDYVVPP 449 (537)
Q Consensus 376 dl~~~~i~~a~G~~l~~~~-~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~----~~~~~~v-r~~~~~~~G~~v~~ 449 (537)
|+++++++.++|....... .......++....+. .+.+|++..+. ....|++ +++.+..+|+.|.+
T Consensus 308 d~~~~~i~~alg~~~~~~~~~~~~~~~~~~~~~~~--------~~~~G~~~~i~g~~~~~~~p~v~~~~~~~~~G~~v~~ 379 (425)
T 3vot_A 308 NFMQLVLQNALKPLESSEFEGEIRPVRTAGNYIIP--------VQGSGTFEKIDGLEEVKQRQEVKRVFQFMRRGAKILP 379 (425)
T ss_dssp CHHHHHHHHHHSCCCGGGSCSCCCCSSEEEEEECC--------CCSCEEEEEEETHHHHHTCTTEEEEEECCCTTCEECC
T ss_pred CHHHHHHHHHCCCccccccccccccceEEEEEEEc--------CCCCeEEEecCCHHHHhcCCCeEEEEEEecCCCEeCC
Confidence 9999999999997553221 112223344333332 34568887773 2234676 67888899999976
Q ss_pred C--CCcccEEEEEEcCCHHHHHHHHHHhhhcceEee
Q 009323 450 S--YDSLLGKLIVWAPTREKAIERMKRALNDTIITG 483 (537)
Q Consensus 450 ~--~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g 483 (537)
. +++++|+|+++|+|+++|.++++++++.++|..
T Consensus 380 ~~~~~~~~g~v~~~g~~~~ea~~~~~~~~~~i~i~~ 415 (425)
T 3vot_A 380 YPHFSGYPGFILTSHHSYEECEAFYRELDDELHIIY 415 (425)
T ss_dssp TTCCCCCSEEEEEEESSHHHHHHHHHHHHHHCEEEE
T ss_pred CCCCCCeEEEEEEEECCHHHHHHHHHHHhCccEEEE
Confidence 4 456899999999999999999999999999864
No 16
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=2.8e-49 Score=459.62 Aligned_cols=413 Identities=21% Similarity=0.310 Sum_probs=343.8
Q ss_pred CCcEEEEEcCcHH-----------HHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHH
Q 009323 70 RQEKILVANRGEI-----------AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 70 ~~~kvLi~g~g~~-----------a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~ 138 (537)
+++||||+|+|++ +.+++++|+++|++|++++++++....+..++|+.+ +. ..+.+.+.++
T Consensus 6 ~~~kIlIig~G~i~ig~a~E~d~sg~~~~~al~~~G~~vv~v~~~~~~~~~~~~~ad~~~-i~-------p~~~e~i~~i 77 (1073)
T 1a9x_A 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATY-IE-------PIHWEVVRKI 77 (1073)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEE-CS-------CCCHHHHHHH
T ss_pred CCCEEEEECCCcccccccccccchHHHHHHHHHHcCCEEEEEeCCcccccCChhhCcEEE-EC-------CCCHHHHHHH
Confidence 4789999999985 778999999999999999888777667889999877 44 2478999999
Q ss_pred HHHcCCCEEEeCCCcc-ccc--HHHHH--HHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHH
Q 009323 139 AISRGCTMLHPGYGFL-AEN--AVFVE--MCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA 213 (537)
Q Consensus 139 a~~~~~d~V~p~~g~~-se~--~~~a~--~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~ 213 (537)
+++.++|+|+|++|+. .++ ..+++ .++++|++++||+++++..+.||..+|++|+++|+|+|++ ..+.+.+++
T Consensus 78 ~~~~~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~--~~v~~~~ea 155 (1073)
T 1a9x_A 78 IEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARS--GIAHTMEEA 155 (1073)
T ss_dssp HHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSE--EEESSHHHH
T ss_pred HHHhCCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCE--EEECCHHHH
Confidence 9999999999998751 112 12333 6788999999999999999999999999999999999999 688999999
Q ss_pred HHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEE
Q 009323 214 VKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHF 293 (537)
Q Consensus 214 ~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~ 293 (537)
.++++++|||+||||..|+||+|+.++++.+|+.++++.+...+ +...++||+||+|++|++++++.|++|+++.+
T Consensus 156 ~~~~~~ig~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~~----~~~~vlvEe~I~G~~E~~v~v~~d~~g~~v~~ 231 (1073)
T 1a9x_A 156 LAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLS----PTKELLIDESLIGWKEYEMEVVRDKNDNCIIV 231 (1073)
T ss_dssp HHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHHC----TTSCEEEEECCTTSEEEEEEEEECTTCCEEEE
T ss_pred HHHHHHcCCCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhhC----CCCcEEEEEccCCCeEEEEEEEEeCCCCEEEE
Confidence 99999999999999999999999999999999999998876542 34689999999998899999999988998877
Q ss_pred eeeecc--cccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCc-ceeEEEEEEeC-CCCEEEEEEecCCCCccccc
Q 009323 294 GERDCS--IQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYI-GVGTVEFLLDE-RGSFYFMEMNTRIQVEHPVT 369 (537)
Q Consensus 294 ~~r~~~--~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~-G~~~vEf~~~~-~g~~~~lEiNpR~~g~~~~~ 369 (537)
...+.. ...+.......+|++.++++..+++.+.+.++++++|+. |.+++||++++ +|++||+|||||+++++.++
T Consensus 232 ~~~e~~dp~~v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vdf~~~~~~g~~~viEiNpR~~~ss~l~ 311 (1073)
T 1a9x_A 232 CSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALA 311 (1073)
T ss_dssp EEEEESSCTTSCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTCCEEEEEEESSCCHHHHHH
T ss_pred EEEecccCCccccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceEEEEEEECCCCCEEEEEecCCCCccHHHH
Confidence 543211 011234466678987799999999999999999999999 99999999996 78899999999999999999
Q ss_pred hhhcCCCHHHHHHHHHcCCCCCCCCCccccceeEEEEEEeeC-CCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccC
Q 009323 370 EMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAE-DPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVP 448 (537)
Q Consensus 370 ~~~~Gidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae-~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~ 448 (537)
++++|+|+.+.++++++|.+++..... ++++ +|. .|.|+.+.+.. .. |.+.++.+...+.++.
T Consensus 312 ~~atG~~l~~~~~~~a~G~~l~~~~~~-----------i~~~~~~a-~f~p~~~~v~~-~i---p~~~~~~~~~~~~~~~ 375 (1073)
T 1a9x_A 312 SKATGFPIAKVAAKLAVGYTLDELMND-----------ITGGRTPA-SFEPSIDYVVT-KI---PRFNFEKFAGANDRLT 375 (1073)
T ss_dssp HHHHSCCHHHHHHHHHTTCCGGGSBCT-----------TTTTCSBS-CSCCBCSSEEE-EE---EECCGGGCTTSCCBCC
T ss_pred HHHhCCCHHHHHHHHHcCCChHHhhcc-----------ccCccCHH-HcccCCCcEEE-Ec---ccccccccCCCCcccC
Confidence 999999999999999999998654322 2223 343 68888887732 22 2333444444567777
Q ss_pred CCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeeeccC--------HHHHHHhcCCcc----------ccCC-------
Q 009323 449 PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTT--------IEYHKLILDVED----------FKNG------- 503 (537)
Q Consensus 449 ~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~~tn--------~~~~~~~~~~~~----------f~~~------- 503 (537)
+.+++ +|+|+++|+|++||++|+.++++ +.+.|+.+| .+.+...|.+|. |+.|
T Consensus 376 ~~~~~-~G~v~~~g~~~~ea~~ka~~~l~-~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~~~a~~~g~~~~~~~ 453 (1073)
T 1a9x_A 376 TQMKS-VGEVMAIGRTQQESLQKALRGLE-VGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVF 453 (1073)
T ss_dssp SSCCC-CEEEEEEESSHHHHHHHHHHHSS-SSCSSSCCSSCTTCTTHHHHHHHHHHTCBTTHHHHHHHHHHTTBCHHHHH
T ss_pred CCccC-cEEEEEEcCCHHHHHHHHHHhhc-ccccCcCccccccccccHHHHHHHHhCCCccHHHHHHHHHHcCCCHHHHH
Confidence 88888 99999999999999999999998 789998754 677888888887 7888
Q ss_pred ---cccccccccch
Q 009323 504 ---KVDTAFIPKHE 514 (537)
Q Consensus 504 ---~~~t~~~~~~~ 514 (537)
++|.+||++..
T Consensus 454 ~~~~i~~~f~~~~~ 467 (1073)
T 1a9x_A 454 NLTNIDRWFLVQIE 467 (1073)
T ss_dssp HHHCCCHHHHHHHH
T ss_pred HhhccCHHHHHHHH
Confidence 78889988653
No 17
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=100.00 E-value=1.5e-47 Score=400.82 Aligned_cols=379 Identities=17% Similarity=0.192 Sum_probs=301.8
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
++||||+|+|+++.+++++++++|+++++++++++ .+...++|+.+.++ |.|.+.+++++++.++|+|+|+
T Consensus 11 ~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~d~~~~~~-------~~d~~~l~~~~~~~~~d~v~~~ 81 (391)
T 1kjq_A 11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD--APAMHVAHRSHVIN-------MLDGDALRRVVELEKPHYIVPE 81 (391)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT--CGGGGGSSEEEECC-------TTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC--CchhhhccceEECC-------CCCHHHHHHHHHHcCCCEEEEC
Confidence 57999999999999999999999999999976544 46778899988763 7889999999999999999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHH-HHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEec
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETM-KNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l-~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~ 229 (537)
+++.. ..+++.++..|+ ++||+++++..++||..++++| +++|||+|++ ..+.+.+++.++++++|||+||||.
T Consensus 82 ~e~~~--~~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 156 (391)
T 1kjq_A 82 IEAIA--TDMLIQLEEEGL-NVVPCARATKLTMNREGIRRLAAEELQLPTSTY--RFADSESLFREAVADIGYPCIVKPV 156 (391)
T ss_dssp SSCSC--HHHHHHHHHTTC-EESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCE--EEESSHHHHHHHHHHHCSSEEEEES
T ss_pred CCcCC--HHHHHHHHhCCC-CcCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCe--eeeCCHHHHHHHHHhcCCCEEEEeC
Confidence 87654 346677889999 5789999999999999999999 8999999998 6789999999999999999999999
Q ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEE
Q 009323 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~ 309 (537)
.|+||+|++++++.+|+.++++.+...... .+..+++|+||++..|+++.++.++.| +..+...+. ..........
T Consensus 157 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~g-~~~~~~~~~-~~~~~~~~~~ 232 (391)
T 1kjq_A 157 MSSSGKGQTFIRSAEQLAQAWKYAQQGGRA--GAGRVIVEGVVKFDFEITLLTVSAVDG-VHFCAPVGH-RQEDGDYRES 232 (391)
T ss_dssp CC---CCCEEECSGGGHHHHHHHHHHHSGG--GCCCEEEEECCCCSEEEEEEEEEETTE-EEECCCEEE-EEETTEEEEE
T ss_pred CCCCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEEecCCCeEEEEEEEEeCCC-eEEccCcce-EEECCEEEEE
Confidence 999999999999999999999887654211 246899999999449999999998665 333221111 1111222233
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCC
Q 009323 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 310 ~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~ 389 (537)
+.|++ ++++..+++.+++.++++++|+.|++++||+++++ ++||+|||||++++..++...+|+|++++++++++|.+
T Consensus 233 ~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~~-~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~G~~ 310 (391)
T 1kjq_A 233 WQPQQ-MSPLALERAQEIARKVVLALGGYGLFGVELFVCGD-EVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLP 310 (391)
T ss_dssp EECCC-CCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEEETT-EEEEEEEESSCCGGGGGHHHHBSSCHHHHHHHHHTTCC
T ss_pred EeCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCC-cEEEEEEECCCCCCcceeeeecCcCHHHHHHHHHcCCC
Confidence 46776 89999999999999999999999999999999977 59999999999987666666679999999999999998
Q ss_pred CCCCCCccccceeEEEEEEeeCCCCCCCCCC-CCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHH
Q 009323 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPG-PGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~-~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
++. +...++++++++++++|.. .+. .|....+ . |++.+...... .+.+++++|+|+++|+|+++|
T Consensus 311 ~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~-pg~~v~~~~~~----~~~~~~~lg~v~~~g~~~~~a 376 (391)
T 1kjq_A 311 VGG----IRQYGPAASAVILPQLTSQ--NVTFDNVQNAV---G-ADLQIRLFGKP----EIDGSRRLGVALATAESVVDA 376 (391)
T ss_dssp CCC----CCBCSSEEEEEECCEEEES--SCEEECGGGSC---B-TTEEEEECCCC----CEEEECCCEEEEEECSSHHHH
T ss_pred CCC----ccccCcEEEEEEEccCccc--ccccccHHHHh---C-CCCEEEEeccC----CCCCCCeEEEEEEecCCHHHH
Confidence 752 3356778889999876531 121 1222111 2 45543322222 244577899999999999999
Q ss_pred HHHHHHhhhcceEee
Q 009323 469 IERMKRALNDTIITG 483 (537)
Q Consensus 469 ~~~~~~al~~~~i~g 483 (537)
+++++++++.+.|+|
T Consensus 377 ~~~~~~~~~~i~~~~ 391 (391)
T 1kjq_A 377 IERAKHAAGQVKVQG 391 (391)
T ss_dssp HHHHHHHHHHCEEEC
T ss_pred HHHHHHHHhhheecC
Confidence 999999999999873
No 18
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=100.00 E-value=1.2e-47 Score=404.34 Aligned_cols=376 Identities=18% Similarity=0.199 Sum_probs=305.1
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
++.+||||+|+|+++++++++|+++|++|+++ +.+++++..+++|+.+.. +|.|.+.+.++++ ++|+|+
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~--d~~~~~p~~~~ad~~~~~-------~~~d~~~l~~~a~--~~D~V~ 101 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVL--DPDPASPAGAVADRHLRA-------AYDDEAALAELAG--LCEAVS 101 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE--CSCTTCHHHHHSSEEECC-------CTTCHHHHHHHHH--HCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEE--CCCCcCchhhhCCEEEEC-------CcCCHHHHHHHHh--cCCEEE
Confidence 34679999999999999999999999999998 566778889999998864 4889999999994 599999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHH----hCCcE
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADE----LGFPV 224 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~----ig~Pv 224 (537)
++ +......+++.+++. .++||+++++..++||..+|++|+++|||+|++ ..+.+.+++.+++++ + ||+
T Consensus 102 ~~--~e~~~~~~~~~l~~~--~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~v~~~~e~~~~~~~~~~~~-~P~ 174 (419)
T 4e4t_A 102 TE--FENVPAASLDFLART--TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPH--VVIESAAALAALDDAALDAV-LPG 174 (419)
T ss_dssp EC--CTTCCHHHHHHHHTT--SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCE--EEECSHHHHHTSCHHHHHTT-CSE
T ss_pred Ec--cCcCCHHHHHHHHcc--CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCe--EEECCHHHHHHHHHhhcccc-CCE
Confidence 54 444567778888877 478999999999999999999999999999999 688999999988888 9 999
Q ss_pred EEEec-CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccc
Q 009323 225 MIKAT-AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRR 303 (537)
Q Consensus 225 vvKp~-~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~ 303 (537)
||||. .|++|+|++++++.+|+.++++.+ ++..+++|+||++.+|+++.++.|.+|+++.+...+. ....
T Consensus 175 VvKp~~~g~~G~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~Eisv~v~~~~~G~~~~~~~~e~-~~~~ 245 (419)
T 4e4t_A 175 ILKTARLGYDGKGQVRVSTAREARDAHAAL--------GGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQN-VHHN 245 (419)
T ss_dssp EEEESSSCCTTTTEEEECSHHHHHHHHHHT--------TTCCEEEEECCCEEEEEEEEEEECTTSCEEECCCEEE-EEET
T ss_pred EEEecCCCCCCCceEEECCHHHHHHHHHhc--------CCCcEEEeecCCCCeEEEEEEEEcCCCCEEEEeCeEE-EeeC
Confidence 99999 888999999999999999998754 3578999999997699999999998898887754321 1111
Q ss_pred cceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHH
Q 009323 304 NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIH 383 (537)
Q Consensus 304 ~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~ 383 (537)
........|++.++++..+++.+++.++++++||.|++++||+++++|++||+|||||+++++.++..++|+|+++++++
T Consensus 246 g~~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~lg~~G~~~vE~~~~~dG~~~v~EiNpR~~~sg~~t~~~~~~s~~~~~~r 325 (419)
T 4e4t_A 246 GILALTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFEQQVR 325 (419)
T ss_dssp TEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHH
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEeCCCCEEEEEEeCCCCCCCCeEeeccCCCHHHHHHH
Confidence 22223367887689999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCccccceeEEEEEEeeCCCCC-C--CCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEE
Q 009323 384 VAMGGKLRYKQEDIVLQGHSIECRINAEDPFK-N--FRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIV 460 (537)
Q Consensus 384 ~a~G~~l~~~~~~~~~~g~ai~~ri~ae~~~~-~--f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~ 460 (537)
+++|.+++... ....++++++.+.+... . -.+....+.. ....|++.+.. |......+ ..++|+|++
T Consensus 326 a~~G~pl~~~~----~~~~~~m~n~lg~~~~~~~~~~~~~~~~~~~--~l~~p~~~~~~--ygk~~~~~--~rkmGhv~~ 395 (419)
T 4e4t_A 326 AMTRMPLGNPR----QHSPAAMLNILGDVWFPNGAAAGAVTPPWDT--VAAMPAAHLHL--YGKEEARV--GRKMGHVNF 395 (419)
T ss_dssp HHTTCCCCCCC----BCSCEEEEEEEGGGGCTTCGGGCCCCCCHHH--HHTSTTEEEEE--CCCSCCCT--TCEEEEEEE
T ss_pred HHcCCCCCCcc----ccCCeEEEEEecCccccccccccccchHHHH--HHhCCCCEEEE--CCCCCCCC--CCceEEEEE
Confidence 99999985432 23457788888752110 0 0011111111 12346776543 43323333 456999999
Q ss_pred EcCCHHHHHHHHHHhhhcceE
Q 009323 461 WAPTREKAIERMKRALNDTII 481 (537)
Q Consensus 461 ~g~~~~ea~~~~~~al~~~~i 481 (537)
.|+|.++++++++++.+.++|
T Consensus 396 ~~~~~~~~~~~a~~~~~~l~~ 416 (419)
T 4e4t_A 396 TAEMRDDAVAAATACAQLLRV 416 (419)
T ss_dssp ECSSHHHHHHHHHHHHHHHTC
T ss_pred EeCCHHHHHHHHHHHHHhcCc
Confidence 999999999999999988765
No 19
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=100.00 E-value=2.8e-47 Score=404.17 Aligned_cols=388 Identities=16% Similarity=0.193 Sum_probs=300.4
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
++||||+|+|+++..++++++++|+++++++++++ .+...++|+.+.++ +.|.+.+++++++.++|+|+|+
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~--~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~V~~~ 89 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYAN--APAMQVAHRSYVGN-------MMDKDFLWSVVEREKPDAIIPE 89 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTT--CHHHHHSSEEEESC-------TTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC--ChhhhhcceEEECC-------CCCHHHHHHHHHHcCCCEEEEC
Confidence 57999999999999999999999999999976544 46778899988763 7889999999999999999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHH-HHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEec
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETM-KNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l-~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~ 229 (537)
+++.. ..+++.++++|+ ++||+++++..++||..++++| +++|||+|++ ..+.+.+++.++++++|||+||||.
T Consensus 90 ~e~~~--~~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 164 (433)
T 2dwc_A 90 IEAIN--LDALFEFEKDGY-FVVPNARATWIAMHRERLRETLVKEAKVPTSRY--MYATTLDELYEACEKIGYPCHTKAI 164 (433)
T ss_dssp SSCSC--HHHHHHHHHTTC-CBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCE--EEESSHHHHHHHHHHHCSSEEEEEC
T ss_pred cccCC--HHHHHHHHhcCC-eeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCe--eEeCCHHHHHHHHHhcCCCEEEEEC
Confidence 87654 356778899999 5689999999999999999999 8999999998 6789999999999999999999999
Q ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeC--CCcE--EEEeeeecccccccc
Q 009323 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADK--YGNV--VHFGERDCSIQRRNQ 305 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~--~g~v--~~~~~r~~~~~~~~~ 305 (537)
.|+||+|++++++.+|+.++++.+...+.. .+..+++|+||++..|+++.++.+. +|++ ..+...+. ......
T Consensus 165 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~~~G~~~~~~~~~~~~-~~~~~~ 241 (433)
T 2dwc_A 165 MSSSGKGSYFVKGPEDIPKAWEEAKTKARG--SAEKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVGH-YQIDGD 241 (433)
T ss_dssp CC------EEECSGGGHHHHHHC-----------CCEEEEECCCCSEEEEECCEEEECTTSCEEEEEECCEEE-EESSSS
T ss_pred CCcCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEccCCCCeeEEEEEEecccCCCCEeEEEecccce-EEEcCE
Confidence 999999999999999999999877643211 2468999999994399999999876 6774 33222111 111222
Q ss_pred eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccc--cchhhcCCCHHHHHHH
Q 009323 306 KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHP--VTEMISSVDLIEEQIH 383 (537)
Q Consensus 306 ~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~--~~~~~~Gidl~~~~i~ 383 (537)
....+.|++ ++++..+++.+++.++++++|+.|++++||+++++ ++||+|||||++++.. +...++|+|+++++++
T Consensus 242 ~~~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~-~~~viEiN~R~~~~~~~~~~~~~~g~~~~~~~~~ 319 (433)
T 2dwc_A 242 YHASWQPAE-ISEKAEREVYRIAKRITDVLGGLGIFGVEMFVKGD-KVWANEVSPRPHDTGMVTLASHPPGFSEFALHLR 319 (433)
T ss_dssp EEEEEESCC-CCHHHHHHHHHHHHHHHHHHCSSEECEEEEEEETT-EEEEEEEESSCCGGGGGHHHHSCTTCSHHHHHHH
T ss_pred EEEEEcCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCC-cEEEEEEeCCcCCCcceehhHhccCCCHHHHHHH
Confidence 333456877 89999999999999999999999999999999977 5999999999998743 4455679999999999
Q ss_pred HHcCCCCCCC----CCccccceeEEEEEEeeCCCCCCCCCC-CCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEE
Q 009323 384 VAMGGKLRYK----QEDIVLQGHSIECRINAEDPFKNFRPG-PGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKL 458 (537)
Q Consensus 384 ~a~G~~l~~~----~~~~~~~g~ai~~ri~ae~~~~~f~p~-~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~v 458 (537)
+++|.++... +..+...++++++++++++|. ..+. .|... ....|++.+......+ ..+++++|+|
T Consensus 320 ~~~G~~l~~~~~~~~~~~~~~~~a~~~~v~~~~~~--~~~~i~g~~~---~~~~pg~~v~~~~~~~----~~~~~~lg~v 390 (433)
T 2dwc_A 320 AVLGLPIPGEWVDGYRLFPMLIPAATHVIKAKVSG--YSPRFRGLVK---ALSVPNATVRLFGKPE----AYVGRRLGIA 390 (433)
T ss_dssp HHHTCCCCCEEETTEEEECCSSCEEEEEEECSSCE--ESCEEECHHH---HTTSTTEEEEECCCSE----ECTTCEEEEE
T ss_pred HHcCCCCCcccccccccccccccEEEEEEEcCCCC--cCcCcchHHH---HhhCCCcEEEEecCCC----CCCCCeEEEE
Confidence 9999987531 113455678889999987652 1121 12111 1233555433322222 3457789999
Q ss_pred EEEcCCHHHHHHHHHHhhhcceEeeecc
Q 009323 459 IVWAPTREKAIERMKRALNDTIITGVPT 486 (537)
Q Consensus 459 i~~g~~~~ea~~~~~~al~~~~i~g~~t 486 (537)
+++|+|+++|+++++++++.+.++|.+-
T Consensus 391 ~~~g~~~~ea~~~~~~~~~~i~~~~~~~ 418 (433)
T 2dwc_A 391 LAWDKDVEVAKRKAEMVAHMIELRTRSS 418 (433)
T ss_dssp EEECSSHHHHHHHHHHHHHTCEEECTTS
T ss_pred EEEeCCHHHHHHHHHHHHhheEEEeecc
Confidence 9999999999999999999999998653
No 20
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=100.00 E-value=2.3e-48 Score=403.15 Aligned_cols=355 Identities=17% Similarity=0.185 Sum_probs=273.5
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
||||+|+|+|..+..++++||++|++|+++++ ++++++.++||++++++ .+.+.+.++.++ .++|+|+|+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~--~~~~~~~~~aD~~~~~~------~~~d~~~~~~~~--~~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDK--NPQALIRNYADEFYCFD------VIKEPEKLLELS--KRVDAVLPV 70 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES--CTTCTTTTTSSEEEECC------TTTCHHHHHHHH--TSSSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC--CCCChhHhhCCEEEECC------CCcCHHHHHHHh--cCCCEEEEC
Confidence 68999999999999999999999999999954 55667788999999875 356777777666 579999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecC
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~ 230 (537)
+|+..+...++.++++.+++ +||++++++.++||..+|++|+++|+|+|++. .+|||+||||..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~-~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~---------------~ig~P~vvKp~~ 134 (363)
T 4ffl_A 71 NENLACIEFLNSIKEKFSCP-VLFDFEAYRISRDKKKSKDYFKSIGVPTPQDR---------------PSKPPYFVKPPC 134 (363)
T ss_dssp CCCHHHHHHHHHHGGGCSSC-BCCCHHHHHHHTSHHHHHHHHHHTTCCCCCBS---------------CSSSCEEEECSS
T ss_pred CCChhHHHHHHHHHHHCCCc-cCCCHHHHHHhhCHHHHHHHHHhcCCCCCCce---------------ecCCCEEEEECC
Confidence 99876666677777787776 58999999999999999999999999999872 268999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEEE
Q 009323 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEE 310 (537)
Q Consensus 231 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~~ 310 (537)
|+||+|++++++.+++... ...+++|+||+| +|++++++.|+.+.++....+++..+....+..
T Consensus 135 g~g~~gv~~v~~~~~~~~~-------------~~~~~~ee~i~g-~e~sv~~~~d~~~~~~~~~~~~~~~~~~~~~~~-- 198 (363)
T 4ffl_A 135 ESSSVGARIIYDDKDLEGL-------------EPDTLVEEYVEG-EVVSLEVVGDGSHFAVVKETLVHIDETYDCHMV-- 198 (363)
T ss_dssp CCTTTTCEEEC------CC-------------CTTCEEEECCCS-EEEEEEEEEESSCEEECCCEEEEECTTSCEEEE--
T ss_pred CCCCcCeEEeccHHHhhhh-------------ccchhhhhhccC-cEEEEEEEEECCeEEEEEEEEeccCCcccceee--
Confidence 9999999999999886532 468999999999 999999999987666666666665555555444
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccc-cchhhcCCCHHHHHHHHHcCCC
Q 009323 311 APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHP-VTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 311 ~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~-~~~~~~Gidl~~~~i~~a~G~~ 389 (537)
.|++ .. +++.+++.++++++||.|++++||+++++| +||+|||||++|.++ +++.++|+|++++++++++|.+
T Consensus 199 ~p~~-~~----~~~~~~a~~~~~~l~~~G~~~vef~~~~~~-~~viEiN~R~~g~~~~~~~~~~g~dl~~~~~~~~~g~~ 272 (363)
T 4ffl_A 199 TPLP-AN----PLFRQISHDLAANLPLKGIMDVEAIFGPKG-LRVIEIDARFPSQTPTVVYYSSGINLIELLFRAFTDGV 272 (363)
T ss_dssp EECC-CC----HHHHHHHHHHHHTTTCEEEEEEEEEEETTE-EEEEEEECSCCSSHHHHHHHHHCCCHHHHHHHHTTTCC
T ss_pred cchh-HH----HHHHHHHHHHHHhCCccceeeeeeEEeCCe-EEEEEEeCCCCCChHHHHHHHHCcCHHHHHHHHHCCCC
Confidence 4444 33 457789999999999999999999999876 999999999988764 8999999999999999999998
Q ss_pred CCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCC-CccCCCCCcccEEEEEEcCCHHHH
Q 009323 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPD-YVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G-~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
++... .+..++++.+++.+++. ..+.|..+.+. ...+.+.. .+...+ +...+.+++++|+|+++|+|++||
T Consensus 273 ~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~v~~vi~~G~~~~eA 344 (363)
T 4ffl_A 273 EEIRA--IPENKYCIYEHLMFGEN-GVLIPVGEQVL----SMGSDYGK-FYEEPGIEIFLCKGEYPVFTMVFWGKDREET 344 (363)
T ss_dssp CCC------CCCEEEEEEEEECGG-GBEEECCHHHH----TTCSEEEE-EEEETTEEEEEEESSSCEEEEEEEESSHHHH
T ss_pred CCccc--cCCCceEEEEEEecCCC-CccCCCCceEE----ecCCCeeE-EEecCCCCCEecCCCCceEEEEEEECCHHHH
Confidence 76532 34456677777766533 22333322221 11122221 111111 112245688899999999999999
Q ss_pred HHHHHHhhhcceE
Q 009323 469 IERMKRALNDTII 481 (537)
Q Consensus 469 ~~~~~~al~~~~i 481 (537)
++|++++++.++.
T Consensus 345 ~~k~~~al~~i~~ 357 (363)
T 4ffl_A 345 GAKRCKGLSVLKE 357 (363)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 21
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=2.2e-46 Score=389.07 Aligned_cols=360 Identities=19% Similarity=0.262 Sum_probs=294.5
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCC
Q 009323 73 KILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 73 kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~g 152 (537)
||||+|+|.++.+++++++++|+++++++++. ..+...++|+ +.. ++.|.+.+++++ .++|+|+|+++
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~--~~~~~~~a~~-~~~-------~~~d~~~l~~~~--~~~d~v~~~~e 68 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPSP--EACAGQVGEL-VVG-------EFLDEGALLRFA--EGLALVTYEFE 68 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEESCT--TCGGGGTSEE-EEC-------CTTCHHHHHHHH--TTCSEEEECCT
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CChHHHhhce-Eec-------CCCCHHHHHHHH--hCCCEEEECCC
Confidence 59999999999999999999999999996543 4456678887 543 488999999999 68999999987
Q ss_pred cccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecCCC
Q 009323 153 FLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGG 232 (537)
Q Consensus 153 ~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~g~ 232 (537)
+. ...+++.++++| ++||+++++..++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||..|+
T Consensus 69 ~~--~~~~~~~l~~~g--~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~~~~ 142 (369)
T 3aw8_A 69 NV--PVEAARRLEGRL--PLYPPAKALEVAQDRLREKTFFQGLGVPTPPF--HPVDGPEDLEEGLKRVGLPALLKTRRGG 142 (369)
T ss_dssp TC--CHHHHHHHHHHS--CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCE--EEESSHHHHHHHHTTTCSSEEEEECCC-
T ss_pred Cc--CHHHHHHHHHcC--CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCc--eeeCCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 63 467777888888 67999999999999999999999999999998 6789999999999999999999999999
Q ss_pred -CCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEEEc
Q 009323 233 -GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEA 311 (537)
Q Consensus 233 -gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~~~ 311 (537)
||+||+++++.+|+.++++.+ ++..+++|+||++++|++++++.|++|+++.+...+ ..++........+
T Consensus 143 ~~g~Gv~~v~~~~el~~~~~~~--------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~~-~~~~~~~~~~~~~ 213 (369)
T 3aw8_A 143 YDGKGQALVRTEEEALEALKAL--------GGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLVE-NRHWGGILRLSLA 213 (369)
T ss_dssp -----EEEECSHHHHHHHHTTT--------CSSSEEEEECCCCSEEEEEEEEECTTSCEEECCCEE-EEEETTEEEEEEE
T ss_pred CCcceEEEECCHHHHHHHHHhc--------CCCcEEEEEcCCCCEEEEEEEEECCCCCEEEECCee-eeeeCCEEEEEEC
Confidence 999999999999999888754 247899999999339999999999888887764432 2344445556678
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCCCC
Q 009323 312 PSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLR 391 (537)
Q Consensus 312 p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~l~ 391 (537)
|++.++++..+++.+++.++++++||.|++++||++++ |++||+|||||+++++..+...+|+|+++.+++.++|.+++
T Consensus 214 p~~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~-~~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~g~~l~ 292 (369)
T 3aw8_A 214 PAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVG-EELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPLG 292 (369)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TEEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEEC-CcEEEEEEeCCcCCccceeeeeecCCHHHHHHHHHcCCCCC
Confidence 88778999999999999999999999999999999998 67999999999998877778889999999999999999886
Q ss_pred CCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHHHHH
Q 009323 392 YKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIER 471 (537)
Q Consensus 392 ~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~~~ 471 (537)
... ..+++++++++++++ + +..+. ..|++. .+++.+ .+.+ .+++|+|+++|+|+++|+++
T Consensus 293 ~~~----~~~~~~~~~~~~~~~--------~-~~~~~--~~p~~~--~~~~g~-~~~~--~~~lg~v~~~g~~~~ea~~~ 352 (369)
T 3aw8_A 293 STA----PRGQSAMVNLIGEKP--------P-FAEVL--KVEGAH--LHWYGK-AVRP--GRKVGHITLRRDGLKALEEG 352 (369)
T ss_dssp CCC----BCSEEEEEEEESCCC--------C-HHHHH--TSTTEE--EEECCC-CCCT--TCEEEEEEEEESSHHHHHHH
T ss_pred Ccc----ccccEEEEEEeCCCc--------h-HHHhc--cCCCcE--EEEecC-CCCC--CCeEEEEEEEcCCHHHHHHH
Confidence 432 345688999998752 1 11111 124443 334433 3333 36799999999999999999
Q ss_pred HHHhhhcce
Q 009323 472 MKRALNDTI 480 (537)
Q Consensus 472 ~~~al~~~~ 480 (537)
++++++.+.
T Consensus 353 ~~~~~~~i~ 361 (369)
T 3aw8_A 353 LARLSRLVS 361 (369)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHHHhh
Confidence 999999876
No 22
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=100.00 E-value=2e-46 Score=393.45 Aligned_cols=369 Identities=19% Similarity=0.250 Sum_probs=300.6
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
.+||+|+|+|+++.+++++|+++|++|++++ + .+++..+++| ..+.. +|.|.+.+.+++++ +|+|.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~--~~~p~~~~ad~~~~~~~-------~~~d~~~l~~~a~~--~d~i~ 91 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-A--DNSPAKQISAHDGHVTG-------SFKEREAVRQLAKT--CDVVT 91 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-S--TTCTTGGGCCSSCCEES-------CTTCHHHHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-C--CCCcHHHhccccceeec-------CCCCHHHHHHHHHh--CCEEE
Confidence 6799999999999999999999999999996 3 5566778888 44443 58999999999965 89998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCC--CHHHHHHHHHHhCCcEEE
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQ--STEEAVKLADELGFPVMI 226 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~--s~~~~~~~~~~ig~Pvvv 226 (537)
+.++. -...+++.+++ |++ +||+++++..+.||..+|++|+++|||+|++ ..+. +.+++.++++++|||+||
T Consensus 92 ~e~e~--~~~~~l~~l~~-g~~-v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~~~g~P~Vv 165 (403)
T 3k5i_A 92 AEIEH--VDTYALEEVAS-EVK-IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEH--RELVENTPAELAKVGEQLGYPLML 165 (403)
T ss_dssp ESSSC--SCHHHHHHHTT-TSE-ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCE--EEESSCCHHHHHHHHHHHCSSEEE
T ss_pred ECCCC--CCHHHHHHHHc-CCc-cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCE--EEEcCCCHHHHHHHHHHhCCCEEE
Confidence 65432 34677788888 998 7999999999999999999999999999999 6677 999999999999999999
Q ss_pred EecCCC-CCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccc
Q 009323 227 KATAGG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQ 305 (537)
Q Consensus 227 Kp~~g~-gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~ 305 (537)
||..|+ +|+|++++++.+|+.++++.+ ++..+++|+||++.+|+++.++.+++| + ......+..++.+.
T Consensus 166 Kp~~gg~~g~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~E~sv~v~~~~~g-~-~~~p~~~~~~~~g~ 235 (403)
T 3k5i_A 166 KSKTMAYDGRGNFRVNSQDDIPEALEAL--------KDRPLYAEKWAYFKMELAVIVVKTKDE-V-LSYPTVETVQEDSI 235 (403)
T ss_dssp EESSSCCTTTTEEEECSTTSHHHHHHHT--------TTSCEEEEECCCEEEEEEEEEEECSSC-E-EECCCEEEEEETTE
T ss_pred EeCCCCcCCCCEEEECCHHHHHHHHHhc--------CCCcEEEecCCCCCeEEEEEEEEcCCC-E-EEeCCeeeEEeCCE
Confidence 999998 999999999999999988754 357899999999659999999999887 4 44444444556666
Q ss_pred eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHH
Q 009323 306 KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 306 ~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a 385 (537)
......|++.++++..+++.+++.+++++||+.|++++||+++++|++||+|||||++++..++...+|+|+++++++++
T Consensus 236 ~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve~~~~~dg~~~v~EiNpR~~~sg~~~~~~~~~s~~~~~~ra~ 315 (403)
T 3k5i_A 236 CKLVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLEDDSIMLCEIASRIHNSGHYTIEGCALSQFDAHLRAI 315 (403)
T ss_dssp EEEEEESCSSCCHHHHHHHHHHHHHHHHTSCCSEEEEEEEEEETTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCcEEEEEeecCCCCCCceeeeecCCCHHHHHHHHH
Confidence 66677898768999999999999999999999999999999998899999999999998755555678999999999999
Q ss_pred cCCCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEE-EcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCC
Q 009323 386 MGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAY-LPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPT 464 (537)
Q Consensus 386 ~G~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~-~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~ 464 (537)
+|.+++.. .....+.++++++++++... + .+..+ .....|++.+ ++|......+ .+.+|+|+++|+|
T Consensus 316 ~G~pl~~~--~~~~~~~a~m~nilg~~~~~---~---~~~~~~~~~~~p~~~~--~~ygk~~~~~--~rkmGhv~~~~~~ 383 (403)
T 3k5i_A 316 LDLPIPAQ--SLEIRQPSIMLNIIGGAAPD---T---HLQAAECALSIPNASI--HLYSKGAAKP--GRKMGHITVTAPT 383 (403)
T ss_dssp TTCCCCGG--GGSBSSCEEEEEEECCSSSS---H---HHHHHHHHTTSTTEEE--EECCCCSCCT--TCEEEEEEEECSS
T ss_pred cCCCCCcc--cccCCCcEEEEEEecCCccc---c---chhHHHHHhcCCCCEE--EECCCCCCCC--CCeeEEEEEEcCC
Confidence 99987532 22334568889998764311 0 01111 1223467765 3443333333 4679999999999
Q ss_pred HHHHHHHHHHhhhcc
Q 009323 465 REKAIERMKRALNDT 479 (537)
Q Consensus 465 ~~ea~~~~~~al~~~ 479 (537)
.++|++++.++++.+
T Consensus 384 ~~~~~~~a~~~~~~~ 398 (403)
T 3k5i_A 384 MHEAETHIQPLIDVV 398 (403)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999998754
No 23
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=100.00 E-value=5.6e-45 Score=379.97 Aligned_cols=370 Identities=19% Similarity=0.254 Sum_probs=289.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
||||||+|+|.++..++++++++|+++++++++++ .+...++|+.+.++ +.|.+.+.+++ .++|+|+|+
T Consensus 1 M~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~-------~~d~~~l~~~~--~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPR--SPAGQVADEQIVAG-------FFDSERIEDLV--KGSDVTTYD 69 (380)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT--CTTGGGSSEEEECC-------TTCHHHHHHHH--HTCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC--CchhhhCceEEECC-------CCCHHHHHHHH--hcCCEEEec
Confidence 47999999999999999999999999999965543 34567888877653 77889999998 579999998
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecC
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~ 230 (537)
++.. ...+++.+++.|++ ++|+++++..++||..++++|+++|||+|++ ..+.+.++ ++++++||+||||..
T Consensus 70 ~e~~--~~~~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~---~~~~~~~P~vvKp~~ 141 (380)
T 3ax6_A 70 LEHI--DVQTLKKLYNEGYK-IHPSPYTLEIIQDKFVQKEFLKKNGIPVPEY--KLVKDLES---DVREFGFPVVQKARK 141 (380)
T ss_dssp CSCS--CHHHHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHHTTCCCCCE--EECSSHHH---HHHTTCSSEEEEESC
T ss_pred ccCC--CHHHHHHHHHCCCe-ECCCHHHHHHhcCHHHHHHHHHHcCCCCCCe--EEeCCHHH---HHHhcCCCEEEEecC
Confidence 7643 25667788999998 5799999999999999999999999999998 67888877 677899999999999
Q ss_pred CC-CCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeeccc-ccccceeE
Q 009323 231 GG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSI-QRRNQKLL 308 (537)
Q Consensus 231 g~-gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~-~~~~~~~~ 308 (537)
|+ ||+|++++++.+|+.++++ ..+++|+||++++|+++.++.+++|+++.+...+..+ .+......
T Consensus 142 ~~y~g~Gv~~v~~~~el~~~~~------------~~~lvEe~i~~g~e~sv~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 209 (380)
T 3ax6_A 142 GGYDGRGVFIIKNEKDLENAIK------------GETYLEEFVEIEKELAVMVARNEKGEIACYPVVEMYFDEDANICDT 209 (380)
T ss_dssp CC-----EEEECSGGGGGGCCC------------SSEEEEECCCEEEEEEEEEEECSSCCEEEEEEEEEC--------CE
T ss_pred CCCCCCCeEEECCHHHHHHHhc------------CCEEEEeccCCCeeEEEEEEECCCCCEEEECCeeeeecccCCeeEE
Confidence 99 9999999999999876653 5799999999339999999998888877665432211 22223334
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCC
Q 009323 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 ~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~ 388 (537)
...|++ ++++..+++.+++.++++++|+.|++++||+++++|++||+|+|||++++...+...+|+|+++.+++.++|.
T Consensus 210 ~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~~g~~~viEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g~ 288 (380)
T 3ax6_A 210 VIAPAR-IEEKYSKIAREIATSVVEALEGVGIFGIEMFLTKQGEILVNEIAPRPHNSGHYTIEACVTSQFEQHIRAIMNL 288 (380)
T ss_dssp EEESCS-SCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTSCEEEEEEESSCCGGGTHHHHHBSSCHHHHHHHHHTTC
T ss_pred EECCCC-CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEEEecCCCCCCceeehhhccccHHHHHHHHHhCC
Confidence 567887 8999999999999999999999999999999998899999999999998877788889999999999999999
Q ss_pred CCCCCCCccccceeEEEEEEeeCCCCCCCCC-CCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHH
Q 009323 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRP-GPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREK 467 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p-~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~e 467 (537)
+++.... .+.++.+++++.+......+ .+| +..+ ..|++++.. + |..+.. .++.+|+|++.|+|.++
T Consensus 289 ~l~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~-~~~~---~~p~~~~~~--~-g~~~~~-~~~~lg~v~~~g~~~~~ 356 (380)
T 3ax6_A 289 PLGSTEL----LIPAVMVNLLGEEGYYGKPALIGL-EEAL---AIEGLSLHF--Y-GKKETR-PYRKMGHFTVVDRDVER 356 (380)
T ss_dssp CCCCCCB----CSCEEEEEEEBCTTCCBSEEEESH-HHHH---TSTTEEEEE--C-CCSCBC-BTCEEEEEEEECSSHHH
T ss_pred CCCCccc----cCceEEEEEecccccccccccchh-HHHh---cCCCCEEEe--c-CCCCCC-CCCeeEEEEEEeCCHHH
Confidence 8864321 23366788887643201111 122 2222 335665433 2 222222 24569999999999999
Q ss_pred HHHHHHHhhhcceEeee
Q 009323 468 AIERMKRALNDTIITGV 484 (537)
Q Consensus 468 a~~~~~~al~~~~i~g~ 484 (537)
|.++++++++.+.++..
T Consensus 357 a~~~~~~~~~~i~~~~~ 373 (380)
T 3ax6_A 357 ALEKALRAKKILKVVSE 373 (380)
T ss_dssp HHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHhhhhhhcC
Confidence 99999999999999754
No 24
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=100.00 E-value=4.3e-44 Score=374.46 Aligned_cols=363 Identities=18% Similarity=0.210 Sum_probs=292.8
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
+.|+|+|+|+|.++..++++|+++|++|++++. +++.+...++|+.+.. +|.|.+.+.+++++ +|+|.+
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~--~~~~~~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvI~~ 81 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDP--TKNSPCAQVADIEIVA-------SYDDLKAIQHLAEI--SDVVTY 81 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEES--STTCTTTTTCSEEEEC-------CTTCHHHHHHHHHT--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeC--CCCCchHHhCCceEec-------CcCCHHHHHHHHHh--CCEeee
Confidence 357999999999999999999999999999954 4456678899998864 48899999999965 888875
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEec
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~ 229 (537)
.+ ......+++.+++.|+ +||+++++..+.||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||.
T Consensus 82 ~~--e~~~~~~~~~l~~~g~--~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 155 (389)
T 3q2o_A 82 EF--ENIDYRCLQWLEKHAY--LPQGSQLLSKTQNRFTEKNAIEKAGLPVATY--RLVQNQEQLTEAIAELSYPSVLKTT 155 (389)
T ss_dssp SC--CCCCHHHHHHHHHHSC--CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSEEEEES
T ss_pred cc--ccccHHHHHHHHhhCc--cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHhcCCCEEEEeC
Confidence 44 3355677788888886 6899999999999999999999999999999 7889999999999999999999999
Q ss_pred CCCC-CccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeE
Q 009323 230 AGGG-GRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 230 ~g~g-g~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~ 308 (537)
.|++ |+|++++++.+|+.++++.+. +..+++|+||+|.+|+++.++.|.+|++..+...+. .+.......
T Consensus 156 ~~~~~g~Gv~~v~~~~el~~~~~~~~--------~~~~lvEe~i~g~~E~~v~~~~~~~G~~~~~~~~e~-~~~~g~~~~ 226 (389)
T 3q2o_A 156 TGGYDGKGQVVLRSEADVDEARKLAN--------AAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAEN-IHVNNILHE 226 (389)
T ss_dssp SCCSSSCCEEEESSGGGHHHHHHHHH--------HSCEEEEECCCCSEEEEEEEEECTTCCEEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHhcC--------CCCEEEEecccCceEEEEEEEEcCCCCEEEecCeee-EEcCCceEE
Confidence 9975 799999999999999988653 268999999999899999999998888887765443 222333334
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCC
Q 009323 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 ~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~ 388 (537)
...|+. ++++..+++.+++.++++++|+.|++++||+++++|++||+|||||++++.+.+..++|+|+++.+++.++|.
T Consensus 227 ~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~dg~~~viEiNpR~~~s~~~~~~~~g~~~~~~~~r~~lg~ 305 (389)
T 3q2o_A 227 SIVPAR-ITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICNL 305 (389)
T ss_dssp EEESCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTC
T ss_pred EECCCC-CCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCCEEEEEeeCCCCCchhHHHHHcCCCHHHHHHHHHcCC
Confidence 456775 8999999999999999999999999999999998889999999999999888888999999999999999999
Q ss_pred CCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHH
Q 009323 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
+++... ....+++..+.+.... .... .....|++.+.. |......+ ...+|+|++.|+|.++|
T Consensus 306 ~l~~~~----~~~~~~~~~~~g~~~~-------~~~~--~~~~~p~~~~~l--ygk~~~~~--~r~~G~v~~~~~~~~~a 368 (389)
T 3q2o_A 306 PLGETN----LLKPVVMVNILGEHIE-------GVLR--QVNRLTGCYLHL--YGKEEAKA--QRKMGHVNILNDNIEVA 368 (389)
T ss_dssp CCCCCC----BCSCEEEEEEEHHHHH-------HHHH--TGGGCTTEEEEE--CCCSSCCT--TSEEEEEEEECSSHHHH
T ss_pred CCCCcc----ccCcEEEEEEecCchh-------hHHH--HHHhCCCCEEEE--CCCCCCCC--CCeeEEEEEEcCCHHHH
Confidence 985432 2334666666643100 0000 011235665433 32222222 23489999999999999
Q ss_pred HHHHHHhh
Q 009323 469 IERMKRAL 476 (537)
Q Consensus 469 ~~~~~~al 476 (537)
++++..+.
T Consensus 369 ~~~a~~~~ 376 (389)
T 3q2o_A 369 LEKAKSLH 376 (389)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 99988763
No 25
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=100.00 E-value=9.8e-44 Score=370.00 Aligned_cols=361 Identities=18% Similarity=0.248 Sum_probs=286.7
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
+.++|+|+|+|.++.+++++|+++|++++++++ +++++..+++|+.+.. +|.|.+.+.+++++ +|+|.+
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~--~~~~p~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvi~~ 79 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDP--SEDCPCRYVAHEFIQA-------KYDDEKALNQLGQK--CDVITY 79 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES--CTTCTTGGGSSEEEEC-------CTTCHHHHHHHHHH--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC--CCCChhhhhCCEEEEC-------CCCCHHHHHHHHHh--CCccee
Confidence 468999999999999999999999999999954 4456778899998874 48899999999976 899876
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEec
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~ 229 (537)
.++. -....+..+++.+ .++|+++++..+.||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||.
T Consensus 80 ~~E~--~~~~~l~~l~~~~--~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~g~P~vvKp~ 153 (377)
T 3orq_A 80 EFEN--ISAQQLKLLCEKY--NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPF--ISVKESTDIDKAIETLGYPFIVKTR 153 (377)
T ss_dssp SSTT--SCHHHHHHHHHHS--CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCE--EEECSSTHHHHHHHHTCSSEEEEES
T ss_pred cccc--cCHHHHHHHhhhc--CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEeC
Confidence 5421 2234445555543 35799999999999999999999999999998 6788999999999999999999999
Q ss_pred CCC-CCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeE
Q 009323 230 AGG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLL 308 (537)
Q Consensus 230 ~g~-gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~ 308 (537)
.|+ +|+|++++++.+|+.++++.+. ...+++|+||+|.+|+++.++.+.+|++..+...+. ..+......
T Consensus 154 ~gg~~g~Gv~~v~~~~el~~a~~~~~--------~~~~ivEe~i~g~~E~sv~~~~~~~g~~~~~~~~e~-~~~~g~~~~ 224 (377)
T 3orq_A 154 FGGYDGKGQVLINNEKDLQEGFKLIE--------TSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQEN-EHRNQILFK 224 (377)
T ss_dssp SSCCTTTTEEEECSTTSHHHHHHHHT--------TSCEEEEECCCEEEEEEEEEEECGGGCEEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHhcC--------CCcEEEEccCCCCEEEEEEEEEeCCCCEEEECCEeE-EEECCEEEE
Confidence 998 8999999999999999988653 378999999999889999999887888877755443 222233334
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCC
Q 009323 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 ~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~ 388 (537)
...|+. +++ .+++.+++.++++++|+.|++++||+++++|++||+|||||++++..++..++++++++.+++.++|.
T Consensus 225 ~~~Pa~-l~~--~~~~~~~a~~i~~~lg~~G~~~ve~~~~~~g~~~v~EinpR~~~sg~~t~~~~~~s~f~~~~ra~~G~ 301 (377)
T 3orq_A 225 TIVPAR-IDK--TAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQ 301 (377)
T ss_dssp EEESCS-SCC--HHHHHHHHHHHHTTSCCCEEEEEEEEEETTCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTC
T ss_pred EECCCC-CCH--HHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEEEEeeCCcCCCCcEeehhcCCCHHHHHHHHHcCC
Confidence 457775 666 78999999999999999999999999998888999999999998877777889999999999999999
Q ss_pred CCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHH
Q 009323 389 KLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKA 468 (537)
Q Consensus 389 ~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea 468 (537)
+++.. +.....+++..+.+++.. + +.... ...|++.+ ++|......+ .+.+|||.+.|+|.+++
T Consensus 302 pl~~~---~~~~~~~~m~n~lg~~~~-------~-~~~~~-~~~~~~~~--~~ygk~~~~~--~rkmGhv~~~~~~~~~~ 365 (377)
T 3orq_A 302 SLPNS---IELLKPAVMMNLLGKDLD-------L-LENEF-NEHPEWHL--HIYGKSERKD--SRKMGHMTVLTNDVNQT 365 (377)
T ss_dssp CCCSC---CCBSSCEEEEEEEHHHHH-------H-HGGGG-GGCGGGCE--EECCCSSCCT--TSEEEEEEEECSCHHHH
T ss_pred CCCcc---ccccccEEEEEEeCccch-------h-HHHHH-hhCCCCEE--EECCCCCCCC--CCeeEEEEEEcCCHHHH
Confidence 98530 123445788888865210 0 11111 11245544 3344333333 45699999999999999
Q ss_pred HHHHHHh
Q 009323 469 IERMKRA 475 (537)
Q Consensus 469 ~~~~~~a 475 (537)
++++..=
T Consensus 366 ~~~~~~~ 372 (377)
T 3orq_A 366 EQDMYAK 372 (377)
T ss_dssp HHHHHHH
T ss_pred HHHhHHh
Confidence 9987653
No 26
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=100.00 E-value=1.3e-43 Score=364.39 Aligned_cols=336 Identities=16% Similarity=0.194 Sum_probs=272.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
||||+|+|+|+.+.+++.+|+++|++| ++.+.+ ++. ..+ . .++|+|+|.
T Consensus 1 Mk~igilGgGqlg~m~~~aa~~lG~~v--~~~~~~--a~~-------~~~----------~----------l~~d~it~e 49 (355)
T 3eth_A 1 MKQVCVLGNGQLGRMLRQAGEPLGIAV--WPVGLD--AEP-------AAV----------P----------FQQSVITAE 49 (355)
T ss_dssp CCEEEEESCSHHHHHHHHHHGGGTCEE--EEECTT--CCG-------GGC----------C----------CTTSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEE--ECCCCC--CCc-------eEE----------c----------ccCCEEEEC
Confidence 478999999999999999999999999 333443 221 111 1 179999999
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecC
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~ 230 (537)
+++.+.. +++.+++.| +++|+++++..++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||..
T Consensus 50 ~e~v~~~--~l~~l~~~~--~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~--~~v~~~~e~~~~~~~~G~P~VvKp~~ 123 (355)
T 3eth_A 50 IERWPET--ALTRQLARH--PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPW--QLLAERSEWPAVFDRLGELAIVKRRT 123 (355)
T ss_dssp CSCCCCC--HHHHHHHTC--TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCE--EEECCGGGHHHHHHHHCSEEEEEESS
T ss_pred cCCcCHH--HHHHHHhcC--CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCE--EEECCHHHHHHHHHHcCCCEEEEecC
Confidence 9877654 567788877 46899999999999999999999999999998 78899999999999999999999998
Q ss_pred C-CCCccEEEeCC--HHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeeccccccccee
Q 009323 231 G-GGGRGMRLAKE--PDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKL 307 (537)
Q Consensus 231 g-~gg~Gv~~v~~--~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~ 307 (537)
+ ++|+|++++++ .+|+.+++ ++ .+++|+||++.+|+++.++.+.+|++..+...+. .++.+...
T Consensus 124 ~G~~GkGv~~v~~~~~~el~~a~----------~~--~vivEe~I~~~~Eisv~v~~~~~G~~~~~p~~e~-~~~~g~~~ 190 (355)
T 3eth_A 124 GGYDGRGQWRLRANETEQLPAEC----------YG--ECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHN-LHQDGILR 190 (355)
T ss_dssp SCCTTTTEEEEETTCGGGSCGGG----------TT--TEEEEECCCCSEEEEEEEEECTTSCEEECCCEEE-EEETTEEE
T ss_pred CCCCCCeEEEEcCCCHHHHHHHh----------hC--CEEEEEccCCCcEEEEEEEEcCCCCEEEECCEEE-EeeCCeEE
Confidence 5 78899999999 99988743 22 6999999997699999999998899877654332 33333333
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcC
Q 009323 308 LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 308 ~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G 387 (537)
....|+ .++++..+++.+++.+++++|||.|++++||+++++ ++||+|||||++++++++..++++|+++++++.++|
T Consensus 191 ~~~~pa-~l~~~~~~~~~~~a~~i~~aLg~~G~~~vEf~~~~~-~~~v~EinpR~~~sg~~t~~~~~~s~fe~~~ra~~G 268 (355)
T 3eth_A 191 TSVAFP-QANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQ-GLLINELAPRVHNSGHWTQNGASISQFELHLRAITD 268 (355)
T ss_dssp EEEECS-SCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETT-EEEEEEEESSCCGGGTTHHHHSSSCHHHHHHHHHTT
T ss_pred EEECCC-CCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEECC-cEEEEEeeCCCCCCccEEeeeecCCHHHHHHHHHcC
Confidence 334455 489999999999999999999999999999999975 599999999999998899999999999999999999
Q ss_pred CCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHH
Q 009323 388 GKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREK 467 (537)
Q Consensus 388 ~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~e 467 (537)
.+++.. .....++++++.+++. ...+ ...|++.+ ++|.. .+.+ .+.+|||.++|+|.++
T Consensus 269 ~pl~~~----~~~~~~~m~nilg~~~----------~~~~--~~~p~~~~--~~ygk-~~r~--~rkmGhv~~~~~~~~~ 327 (355)
T 3eth_A 269 LPLPQP----VVNNPSVMINLIGSDV----------NYDW--LKLPLVHL--HWYDK-EVRP--GRKVGHLNLTDSDTSR 327 (355)
T ss_dssp CCCCCC----CCCSCEEEEEEESCCC----------CGGG--GGSTTCEE--EECCC-CCCT--TCEEEEEEEECSCHHH
T ss_pred CCCCCc----cccCceEEEEEecchH----------HHHH--HhCCCCEE--EEcCC-CCCC--CCeeEEEEEEcCCHHH
Confidence 998532 2345688899987641 1111 12355553 44544 4444 5679999999999999
Q ss_pred HHHHHHHhhhcc
Q 009323 468 AIERMKRALNDT 479 (537)
Q Consensus 468 a~~~~~~al~~~ 479 (537)
+.++++++.+.+
T Consensus 328 ~~~~~~~~~~~~ 339 (355)
T 3eth_A 328 LTATLEALIPLL 339 (355)
T ss_dssp HHHHHHHHGGGS
T ss_pred HHHHHHHHHHHh
Confidence 999999998876
No 27
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=100.00 E-value=7.3e-44 Score=369.50 Aligned_cols=362 Identities=15% Similarity=0.190 Sum_probs=241.6
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
||||||+|+|.++..++++++++|++++++++ +...+...++|+.+..+ .+.+++ .++|+|+++
T Consensus 1 M~~Ililg~g~~~~~~~~a~~~~G~~v~~~~~--~~~~~~~~~~~~~~~~~------------~l~~~~--~~~d~v~~~ 64 (365)
T 2z04_A 1 MLTVGILGGGQLGWMTILEGRKLGFKFHVLED--KENAPACRVADRCFRTG------------QISEFV--DSCDIITYE 64 (365)
T ss_dssp -CEEEEECCSHHHHHHHHHHGGGTCEEEEECS--SSSCHHHHHSSEEECGG------------GHHHHH--HHCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC--CCCCchhhhccceeeHH------------HHHHHh--hcCCEEEEC
Confidence 47999999999999999999999999999954 44455678888877421 567777 569999988
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecC
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~ 230 (537)
++.. ...+++.++. ++||+++++..++||..++++|+++|||+|++ ..++ .+++.+++++++||+|+||..
T Consensus 65 ~e~~--~~~~~~~l~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~-~~~~~~~~~~~~~P~vvKp~~ 135 (365)
T 2z04_A 65 FEHI--KDEVLEKCES----KLIPNPQALYVKKSRIREKLFLKKHGFPVPEF--LVIK-RDEIIDALKSFKLPVVIKAEK 135 (365)
T ss_dssp SSCC--CHHHHHHHTT----TBSSCTHHHHHHTCHHHHHHHHHTTTCCCCCE--EEC---------------CEEEECC-
T ss_pred CCCC--cHHHHHHHhh----hcCCCHHHHHHhhCHHHHHHHHHHcCCCCCCE--EEEc-HHHHHHHHHhcCCCEEEEEcC
Confidence 7432 1234444433 67999999999999999999999999999998 5667 888888888999999999999
Q ss_pred CC-CCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccceeEE
Q 009323 231 GG-GGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLE 309 (537)
Q Consensus 231 g~-gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~~~~~ 309 (537)
|+ ||+|++++++.+|+.++++.+.. +..+++|+||++++|+++.++.|++|+++.+...+.. .+.......
T Consensus 136 ~~~~g~Gv~~v~~~~el~~~~~~~~~-------~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~~~~-~~~~~~~~~ 207 (365)
T 2z04_A 136 LGYDGKGQYRIKKLEDANQVVKNHDK-------EESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFNK-HEEGILIYN 207 (365)
T ss_dssp ------------------------------------CEEEECCCCSEEEEEEEEECTTCCEEECCEEEEE-EETTEEEEE
T ss_pred CCcCCCCeEEECCHHHHHHHHHHhcc-------CCCEEEEccCCCCEEEEEEEEECCCCCEEEECCEEEE-EeCCEeEEE
Confidence 99 99999999999999999876642 3689999999933999999999988888877655432 233333344
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCC
Q 009323 310 EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGK 389 (537)
Q Consensus 310 ~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~ 389 (537)
..|++ + .+++.+++.++++++|+.|++++||+++++|++||+|||||+++....+...+|+|+++.+++.++|.+
T Consensus 208 ~~p~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~~~g~~~~iEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 282 (365)
T 2z04_A 208 YVPYA-K----LKEAEEITKRLMELLDIVGVFTVEFFLLKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEMP 282 (365)
T ss_dssp EEEEE-C----CHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTCC
T ss_pred ECCHh-H----HHHHHHHHHHHHHHcCCEEEEEEEEEEeCCCcEEEEEeccCcCCCceEEeeccccCHHHHHHHHHhCCC
Confidence 56765 3 567889999999999999999999999988899999999999875444677899999999999999999
Q ss_pred CCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCCcccEEEEEEcCCHHHHH
Q 009323 390 LRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAI 469 (537)
Q Consensus 390 l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~ds~ig~vi~~g~~~~ea~ 469 (537)
++..+. ...+++++++++++. | +.++.+ ...|++++ +++ |..+. .++++|+|+++|+|+++|.
T Consensus 283 l~~~~~----~~~~~~~~~~~~~~~----~--~~~~~~--~~~~~~~~--~~~-g~~~~--~~~~lg~v~~~g~~~~~a~ 345 (365)
T 2z04_A 283 LGSTEL----KLPSGMVNILGKSYE----E--IPLKEI--LSVEGAKL--YWY-GKEKK--PRRKVGHVNVVGRSKEEVV 345 (365)
T ss_dssp CCCCCB----SSCEEEEEEESCCGG----G--SCHHHH--TTSTTEEE--EEC-CCCCC--TTCEEEEEEEECSSHHHHH
T ss_pred CCCccc----cCCEEEEEEECCccc----c--chHHHH--hcCCCCEE--Eec-CCCCC--CCCeEEEEEEecCCHHHHH
Confidence 865431 233678888876531 2 333322 23356654 333 54332 3678999999999999999
Q ss_pred HHHHHhhhcceEeeeccC
Q 009323 470 ERMKRALNDTIITGVPTT 487 (537)
Q Consensus 470 ~~~~~al~~~~i~g~~tn 487 (537)
++++++++.+.++|++-+
T Consensus 346 ~~~~~~~~~i~~~~~~~~ 363 (365)
T 2z04_A 346 EKVERVFTLLKGSREKLP 363 (365)
T ss_dssp HHHHHHHHC---------
T ss_pred HHHHHHHHHhhhccCCCC
Confidence 999999999999998643
No 28
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=100.00 E-value=7.8e-44 Score=376.69 Aligned_cols=377 Identities=17% Similarity=0.235 Sum_probs=286.8
Q ss_pred cEEEEEcCcHHHHHHHHHH-HHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa-~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
+||||+|+|.....+++++ +++|++++++++. +. ....+++ .+.+ ++.|.+.+++++++.++|+|+|+
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~~--~~~~~~~-~~~~-------~~~d~~~l~~~~~~~~~d~v~~~ 69 (424)
T 2yw2_A 1 MKVLVVGNGGREHAIAWKVAQSPLVKELYVAKG-NA--GIWEIAK-RVDI-------SPTDVEKLAEFAKNEGVDFTIVG 69 (424)
T ss_dssp CEEEEEESSHHHHHHHHHHTTCTTCSEEEEEEC-CT--TGGGTSE-EECS-------CTTCHHHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhhCCCCCEEEEECC-Cc--chhhhcc-cccC-------CcCCHHHHHHHHHHcCCCEEEEC
Confidence 4899999996555555544 5689998888643 22 2334454 3322 47899999999999999999986
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEE
Q 009323 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 151 ~g~~se~~---~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvK 227 (537)
. |+. .+++.++..|++++||+++++..++||..+|++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 70 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~PvvvK 143 (424)
T 2yw2_A 70 P----EAPLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARY--EVFTDFEKAKEYVEKVGAPIVVK 143 (424)
T ss_dssp S----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHHHCSSEEEE
T ss_pred C----chHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHHcCCcEEEE
Confidence 4 554 46778889999999999999999999999999999999999998 67899999999999999999999
Q ss_pred ecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccccc
Q 009323 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQ 305 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~~~ 305 (537)
|..|+||+||+++++.+|+.++++.+... ..|+ +..+++|+||+| +|+++.++.|+. .+..+.. +++++
T Consensus 144 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~g-~E~sv~~~~~G~-~~~~~~~-----~~~~~ 214 (424)
T 2yw2_A 144 ADGLAAGKGAVVCETVEKAIETLDRFLNK--KIFGKSSERVVIEEFLEG-EEASYIVMINGD-RYVPLPT-----SQDHK 214 (424)
T ss_dssp ESSCCTTCSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEETT-EEEECCC-----BEECC
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCCC-cEEEEEEEEcCC-EEEeecc-----eeecc
Confidence 99999999999999999999999887542 1233 268999999998 899999998643 3333222 11222
Q ss_pred e------------eEEEcCCCCCCHHHHHHHH-HHHHHHHHHc-----CCcceeEEEEEEeCCCCEEEEEEecCCCCc-c
Q 009323 306 K------------LLEEAPSPALTPELRKAMG-DAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVE-H 366 (537)
Q Consensus 306 ~------------~~~~~p~~~l~~~~~~~i~-~~a~~i~~al-----g~~G~~~vEf~~~~~g~~~~lEiNpR~~g~-~ 366 (537)
+ ....+|++.+++++.+++. +++.++++++ +|.|++++||+++++| +||+|||||+++. +
T Consensus 215 ~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~ 293 (424)
T 2yw2_A 215 RLLDEDKGPNTGGMGAYSPTPVINEEVEKRIREEIVERVIKGLKEEGIYYRGFLYAGLMITKEG-PKVLEFNVRLGDPEA 293 (424)
T ss_dssp EEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTTH
T ss_pred ccccCCCCCCCCCCeeECCCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEecCCCCcHH
Confidence 1 2245787668999888884 6787777765 7789999999999989 9999999999765 3
Q ss_pred ccchhhcCCCHHHHHHHHHcCCCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCc-eeEEEc-CCCCeEEEeeeccCC
Q 009323 367 PVTEMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGR-ITAYLP-AGGPFVRMDSHVYPD 444 (537)
Q Consensus 367 ~~~~~~~Gidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~-i~~~~~-~~~~~vr~~~~~~~G 444 (537)
...+..+|+|+.+.+++++.|. ++. . ....++++.+++.++++.. .|..|. +..+.. ...+++++. ..|
T Consensus 294 ~~i~~~~g~d~~~~~~~~~~g~-l~~--~-~~~~~~a~~~~~~~~g~~~--~~~~g~~i~~~~~~~~~~~~~~~---~~g 364 (424)
T 2yw2_A 294 QPILMRVKNDFLETLLNFYEGK-DVH--I-KEDERYALDVVLASRGYPE--KPETGKIIHGLDYLKSMEDVVVF---HAG 364 (424)
T ss_dssp HHHHHTBCSCHHHHHHHHHTTC-CCC--C-CBCSSEEEEEEEECTTTTS--SCCCCCBCBCHHHHHTSTTEEEE---ESS
T ss_pred HHHHHHhCCCHHHHHHHHHcCC-CCc--c-cccCCcEEEEEEecCCCCC--CCCCCCcCcCcccccCCCCeEEE---Ecc
Confidence 3455679999999999999997 321 1 1223678888998764422 345554 443321 113566542 234
Q ss_pred CccC----CCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009323 445 YVVP----PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 445 ~~v~----~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
..+. .....++|+|+++|+|+++|+++++++++.+.++|.
T Consensus 365 ~~~~~~~~~~~~~r~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~ 408 (424)
T 2yw2_A 365 TKKEGNFTVTSGGRVLNVCAYGKTLKEAKERAYEAIRYVCFEGM 408 (424)
T ss_dssp EEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTC
T ss_pred eEeeCCEEEecCCcEEEEEEEeCCHHHHHHHHHHHHhcceeCCc
Confidence 4331 112346899999999999999999999999999986
No 29
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-42 Score=365.76 Aligned_cols=377 Identities=18% Similarity=0.215 Sum_probs=285.3
Q ss_pred cEEEEEcCcHHHHHHHHHH-HHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa-~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
+||||+|+|.....+++++ +++|++++++++. ++ .....++ . + + ++.|.+.+++++++.++|+|+|+
T Consensus 1 mkililG~g~r~~a~a~~l~~~~g~~~v~~~~~-~~--~~~~~~~-~--~---~---~~~d~~~l~~~~~~~~~d~v~~~ 68 (417)
T 2ip4_A 1 MKVLVVGSGGREHALLWKAAQSPRVKRLYAAPG-NA--GMEALAE-L--V---P---WNGDVEALADWALAEGIDLTLVG 68 (417)
T ss_dssp CEEEEEESSHHHHHHHHHHHTCSSCCEEEEEEC-CT--TGGGTSE-E--C---C---CCSCHHHHHHHHHHHTCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEECC-Cc--chhhhcc-c--C---C---CccCHHHHHHHHHHcCCCEEEEC
Confidence 4799999997666777766 4589998888543 22 1223333 2 2 1 48899999999999999999987
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEE
Q 009323 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 151 ~g~~se~~---~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvK 227 (537)
. |+. .+++.++..|++++||+++++..++||..+|++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 69 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~P~vvK 142 (417)
T 2ip4_A 69 P----EAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARY--RVFREPLEALAYLEEVGVPVVVK 142 (417)
T ss_dssp S----SHHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCE--EEESSHHHHHHHHHHHCSSEEEE
T ss_pred C----chHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCe--eeeCCHHHHHHHHHHcCCCEEEE
Confidence 5 443 46778889999999999999999999999999999999999998 67899999999999999999999
Q ss_pred ecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEee-eec-ccc----
Q 009323 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGE-RDC-SIQ---- 301 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~-r~~-~~~---- 301 (537)
|..|+||+||+++++.+|+.++++.+.. ..++ ..+++|+||+| +|+++.++.|+. .+..+.. +.. ...
T Consensus 143 p~~~~gg~Gv~~v~~~~el~~~~~~~~~---~~~~-~~~lvEe~i~g-~E~sv~~~~~G~-~~~~~~~~~~~~~~~~~~~ 216 (417)
T 2ip4_A 143 DSGLAAGKGVTVAFDLHQAKQAVANILN---RAEG-GEVVVEEYLEG-EEATVLALTDGE-TILPLLPSQDHKRLLDGDQ 216 (417)
T ss_dssp CTTSCSSTTCEEESCHHHHHHHHHHHTT---SSSC-CCEEEEECCCS-CEEEEEEEESSS-CEEECCCBEECCEEETTTE
T ss_pred ECCCCCCCCEEEeCCHHHHHHHHHHHHh---hccC-CeEEEEECccC-cEEEEEEEEeCC-EEEEcchheechhhccCCC
Confidence 9999999999999999999999987641 1233 68999999998 899999998643 3333321 110 000
Q ss_pred -cccceeEEEcCCCCCCHHHHHHH-HHHHHHHHHHc-----CCcceeEEEEEEeCCCCEEEEEEecCCCCcc-ccchhhc
Q 009323 302 -RRNQKLLEEAPSPALTPELRKAM-GDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PVTEMIS 373 (537)
Q Consensus 302 -~~~~~~~~~~p~~~l~~~~~~~i-~~~a~~i~~al-----g~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~-~~~~~~~ 373 (537)
.........+|++ +++++.+++ .+++.++++++ +|.|++++||+++++| +||+|||||++++. ......+
T Consensus 217 ~~~~g~~~~~~p~~-l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~i~~~~ 294 (417)
T 2ip4_A 217 GPMTGGMGAVAPYP-MDEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLMLTREG-PKVLEFNARFGDPEAQALLPLL 294 (417)
T ss_dssp EEECSCSEEEESCC-CCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEECSSC-EEEEEEESSCCTTHHHHHTTTB
T ss_pred CCcCCCCeeeeCCC-CCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEEeCCC-eEEEEEecCCCCcHHHHHHHHh
Confidence 0111223457887 899988888 66677777775 7789999999999989 99999999998763 3445579
Q ss_pred CCCHHHHHHHHHcCCCCCCCCCccc-cceeEEEEEEeeCCCCCCCCCCCCc-eeEEEcCCCCeEEEeeeccCCCccCC--
Q 009323 374 SVDLIEEQIHVAMGGKLRYKQEDIV-LQGHSIECRINAEDPFKNFRPGPGR-ITAYLPAGGPFVRMDSHVYPDYVVPP-- 449 (537)
Q Consensus 374 Gidl~~~~i~~a~G~~l~~~~~~~~-~~g~ai~~ri~ae~~~~~f~p~~G~-i~~~~~~~~~~vr~~~~~~~G~~v~~-- 449 (537)
|+|+.+.+++++.|.... .++. ..++++.+++.++++.. .|.+|. |..+..+ +++++. ..|..+..
T Consensus 295 g~d~~~~~~~~~~g~l~~---~~~~~~~~~~~~~~l~~~~~~~--~~~~g~~i~~~~~~--~~v~~~---~~g~~~~~~~ 364 (417)
T 2ip4_A 295 ENDLVELALRVAEGRLAG---TRLSWKEGAAACVVLAAPGYPE--SPRKGIPLHVPEPP--EGVLVF---HAGTRREGGR 364 (417)
T ss_dssp CSCHHHHHHHHHHTCGGG---CCCCBCSSEEEEEEEECTTTTT--SCCCCCBCBCCCCC--TTEEEE---ESSEEESSSS
T ss_pred CCCHHHHHHHHHcCCCCc---CCccccCCcEEEEEEeCCCCCC--CCCCCCcccccCCC--CCeEEE---ECceEeeCCe
Confidence 999999999999997322 1122 23578888887765422 355665 5544322 566542 24554421
Q ss_pred --CCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009323 450 --SYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 450 --~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
....++|+|+++|+|+++|+++++++++.+.++|.
T Consensus 365 ~~~~~~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~~~ 401 (417)
T 2ip4_A 365 LVSAGGRVLNVVGLGRDLKEALERAYAYIPQVGFPGA 401 (417)
T ss_dssp EEECSSEEEEEEEEESSHHHHHHHHHHHGGGSBCTTC
T ss_pred EEecCCcEEEEEEEcCCHHHHHHHHHHHHhcCccCCc
Confidence 11235899999999999999999999999999885
No 30
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.5e-43 Score=374.36 Aligned_cols=376 Identities=16% Similarity=0.168 Sum_probs=302.5
Q ss_pred CCEEEEecCCCCCC--hhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCCccccc--HHHHHHHHHCCCc
Q 009323 95 IPCVAVYSTIDKDA--LHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYGFLAEN--AVFVEMCREHGIN 170 (537)
Q Consensus 95 ~~vv~v~~~~d~~~--~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~g~~se~--~~~a~~~e~~gi~ 170 (537)
+.+++++++.|... ++.+.||+.+++++.+..+++.+++.|++++++.++|+|+|+ +|+ ..+++.++++|++
T Consensus 52 ~~~Vav~~~~D~~~~~p~~~~Ad~~~~~~~~~~~~~~~~i~~I~~~a~~~~id~Vip~----sE~~l~~~a~~~e~~Gi~ 127 (474)
T 3vmm_A 52 KYSVAVIKDKDYFKSLADFEHPDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTN----NELFIAPMAKACERLGLR 127 (474)
T ss_dssp HHEEEEEECGGGCSSGGGGCCCSCCSSCCSCCCCCHHHHHHHHHHHHHHTTCSEEEES----CGGGHHHHHHHHHHTTCC
T ss_pred ceEEEEEeCCCcccCCcchhhcCeEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEC----CcccHHHHHHHHHHcCCC
Confidence 34666777766544 558899999988766665666788999999999999999994 366 7899999999998
Q ss_pred eeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHH
Q 009323 171 FIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLL 250 (537)
Q Consensus 171 ~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~ 250 (537)
||+++++..++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||..|+||+|++++++.+|+.+++
T Consensus 128 --g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~--~~v~s~ee~~~~~~~lg~PvVVKP~~g~gg~Gv~iv~~~eel~~a~ 203 (474)
T 3vmm_A 128 --GAGVQAAENARDKNKMRDAFNKAGVKSIKN--KRVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDEF 203 (474)
T ss_dssp --CSCHHHHHHTTCHHHHHHHHHHTTSCCCCE--EEECSHHHHHHHHHHSCSSEEEEESSCCTTTTCEEECCTTSHHHHH
T ss_pred --CCCHHHHHHhhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEECCCCcCceEEEECCHHHHHHHH
Confidence 999999999999999999999999999999 7889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-------hcCCCcEEEEeccCCCcE-----------EEEEEE-EeCCCcEEEEeeeecccccccceeEEEc
Q 009323 251 QQAKSEAAA-------AFGNDGVYLEKYVQNPRH-----------IEFQVL-ADKYGNVVHFGERDCSIQRRNQKLLEEA 311 (537)
Q Consensus 251 ~~~~~~~~~-------~~~~~~~lvEe~I~g~~e-----------~~v~v~-~d~~g~v~~~~~r~~~~~~~~~~~~~~~ 311 (537)
+.+.+.... .+ +..++||+||+|.++ +++.++ .|+++.++.+.+++++.+ +++..+.+
T Consensus 204 ~~~~~~~~~~~~~~a~~~-~~~vlVEe~I~G~e~~~~q~~~~~~e~sv~~v~~dg~~~~v~i~~~~~~~~--~~~~~~~~ 280 (474)
T 3vmm_A 204 NRVNDYLKSINVPKAVTF-EAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQIG--FTETSHIT 280 (474)
T ss_dssp HHHHHHHTTSCCCTTCCC-SCSEEEEECCCBCHHHHCSSSSSCSEEEEEEEEETTEEEEEEEEEECCCBT--TBCCEEEE
T ss_pred HHHHHHHhhccccccccC-CCeEEEEeCCCCceeeeeecccccceeEEEEEEECCeEEEEEEEeeccCCC--ccceEEEE
Confidence 988776543 22 378999999999552 888744 455555666777777655 66778889
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCccee-EEEEEEeCCCCEEEEEEecCCCCc--cccchhhcCCCHHHHHHHHHc-C
Q 009323 312 PSPALTPELRKAMGDAAVAAAASIGYIGVG-TVEFLLDERGSFYFMEMNTRIQVE--HPVTEMISSVDLIEEQIHVAM-G 387 (537)
Q Consensus 312 p~~~l~~~~~~~i~~~a~~i~~alg~~G~~-~vEf~~~~~g~~~~lEiNpR~~g~--~~~~~~~~Gidl~~~~i~~a~-G 387 (537)
|++ ++++..++|.+.+.++++++|+.|.+ |+||+++++|++||||||||++|+ +++++.++|+|++++++++++ |
T Consensus 281 Pa~-l~~~~~~~l~~~a~~~~~alG~~g~~~~vef~~~~dg~~~~iEvNpR~~G~~~~~~~~~~tG~dl~~~~i~~a~~G 359 (474)
T 3vmm_A 281 PSI-LDEEAKKKIVEAAKKANEGLGLQNCATHTEIKLMKNREPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVLCFG 359 (474)
T ss_dssp SCC-CCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEEGGGEEEEEEEESSCCSTTHHHHHHHHHCCCHHHHHHHHHHHG
T ss_pred CCC-CCHHHHHHHHHHHHHHHHHcCCCCccEEEEEEEcCCCCEEEEEEeCCCCCCchHHHHHHHHCcCHHHHHHHHHcCC
Confidence 995 99999999999999999999999877 699999988899999999999964 789999999999999999999 9
Q ss_pred CCCCCCCCccc-cceeEEEEEEeeCCCCC--CCCCCCC--ceeEEEcCC----CCeEEEee-----eccCCCccCCCCCc
Q 009323 388 GKLRYKQEDIV-LQGHSIECRINAEDPFK--NFRPGPG--RITAYLPAG----GPFVRMDS-----HVYPDYVVPPSYDS 453 (537)
Q Consensus 388 ~~l~~~~~~~~-~~g~ai~~ri~ae~~~~--~f~p~~G--~i~~~~~~~----~~~vr~~~-----~~~~G~~v~~~~ds 453 (537)
.++++.+..+. ..+++..++++++.+.. .+.+..+ .|..+..|. +..+.++. .......+-.-|||
T Consensus 360 ~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (474)
T 3vmm_A 360 KDADLPDGLLDQEPYYVADCHLYPQHFKQNGQIPETAEDLVIEAIDIPDGLLKGDTEIVSFSAAAPGTSVDLTLFEAFNS 439 (474)
T ss_dssp GGSCCCSSCCCCCSSEEEEEEECHHHHHHTTSSCTTCEEEEEEEEECCTTCCCTTCEEEEEEECCTTEEECTTSCGGGCC
T ss_pred CCCCCCcccccCCCceeEEEEEeccccccccccCCcccceeecceecccceecccceEeeccCCCCCceEEEEeehhccC
Confidence 99988776665 35677888888775532 1222222 233343332 22233321 12223445557899
Q ss_pred ccEEEEEEcCCHHHHHHHHHHhhhcceEee
Q 009323 454 LLGKLIVWAPTREKAIERMKRALNDTIITG 483 (537)
Q Consensus 454 ~ig~vi~~g~~~~ea~~~~~~al~~~~i~g 483 (537)
.++. +..|.++++..+.++++++..+++.
T Consensus 440 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (474)
T 3vmm_A 440 IAAF-ELKGSNSQDVAESIRQIQQHAKLTA 468 (474)
T ss_dssp CEEE-EEEESCHHHHHHHHHHHHHHCEEEE
T ss_pred ceeE-EeccccHHHHHHHHHHHHHhhhhhh
Confidence 6654 4499999999999999999888764
No 31
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=377.18 Aligned_cols=390 Identities=17% Similarity=0.198 Sum_probs=284.6
Q ss_pred CCCCCcEEEEEcCcHHHHHHHHHH-HHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009323 67 VTCRQEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 67 ~~~~~~kvLi~g~g~~a~~ii~aa-~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d 145 (537)
+.+|.+||||+|+|.....+++.+ +++|++++++++... .+. ..++ ...+. -++.|.+.+++++++.++|
T Consensus 20 ~~~m~~~IlIlG~g~r~~al~~~~a~~~g~~~v~~~~~~~--~~~-~~~~-~~~~~-----~~~~d~~~l~~~~~~~~~d 90 (452)
T 2qk4_A 20 FQSMAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNA--GTA-CSEK-ISNTA-----ISISDHTALAQFCKEKKIE 90 (452)
T ss_dssp --CCSEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCG--GGS-BSSS-EEECC-----CCSSCHHHHHHHHHHHTCC
T ss_pred ccccCcEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCh--hhh-hhcc-ccccc-----cCCCCHHHHHHHHHHcCCC
Confidence 445678999999997666666554 668999877754322 222 3344 22221 1588999999999999999
Q ss_pred EEEeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCC
Q 009323 146 MLHPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGF 222 (537)
Q Consensus 146 ~V~p~~g~~se~~---~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~ 222 (537)
+|+|+. |+. .+++.+++.|++++||+++++..++||..+|++|+++|||+|++ ..+.+.+++.+++++++|
T Consensus 91 ~V~~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~g~ 164 (452)
T 2qk4_A 91 FVVVGP----EAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQW--KAFTKPEEACSFILSADF 164 (452)
T ss_dssp EEEECS----SHHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCE--EEESSHHHHHHHHHHCSS
T ss_pred EEEECC----cHHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHhCCC
Confidence 999864 443 56678889999999999999999999999999999999999998 678999999999999999
Q ss_pred c-EEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeee-c
Q 009323 223 P-VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERD-C 298 (537)
Q Consensus 223 P-vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~-~ 298 (537)
| +||||..|+||+||+++++.+|+.++++.+... ..|+ +..+++|+||+| +|+++.++.|+. .++.+.... .
T Consensus 165 P~vvvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~G-~E~sv~~~~dG~-~~~~~~~~~~~ 240 (452)
T 2qk4_A 165 PALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQE--KAFGAAGETIVIEELLDG-EEVSCLCFTDGK-TVAPMPPAQDH 240 (452)
T ss_dssp CEEEEEESBC---CCEEECSSHHHHHHHHHHHTTC---------CCEEEEECCCS-EEEEEEEEECSS-CEEECCCBEEE
T ss_pred CeEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCCC-CeEEEEEEECCC-EEEEcceeeec
Confidence 9 999999999999999999999999999876531 1132 368999999998 999999998543 355444321 0
Q ss_pred -cccc-----ccceeEEEcCCCCCCHHHHHHHH-HHHHHHHHHc-----CCcceeEEEEEEeCCCCEEEEEEecCCCCcc
Q 009323 299 -SIQR-----RNQKLLEEAPSPALTPELRKAMG-DAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH 366 (537)
Q Consensus 299 -~~~~-----~~~~~~~~~p~~~l~~~~~~~i~-~~a~~i~~al-----g~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~ 366 (537)
.... ........+|++.+++++.+++. +++.++++++ +|.|++++||+++++| +||+|||||+++..
T Consensus 241 ~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~~~~~ 319 (452)
T 2qk4_A 241 KRLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTKNG-PKVLEFNCRFGDPE 319 (452)
T ss_dssp EEEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEEETTE-EEEEEEESSCCTTT
T ss_pred ccccCCCCCCCCCCceeeccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEeccCCCcH
Confidence 0100 01122345788768998888886 6777777765 5779999999999989 99999999998763
Q ss_pred -ccchhhcCCCHHHHHHHHHcCCCCCCCCCccc-ccee-EEEEEEeeCCCCCCCCCCCC-ceeEEEcCCCCeEEEeeecc
Q 009323 367 -PVTEMISSVDLIEEQIHVAMGGKLRYKQEDIV-LQGH-SIECRINAEDPFKNFRPGPG-RITAYLPAGGPFVRMDSHVY 442 (537)
Q Consensus 367 -~~~~~~~Gidl~~~~i~~a~G~~l~~~~~~~~-~~g~-ai~~ri~ae~~~~~f~p~~G-~i~~~~~~~~~~vr~~~~~~ 442 (537)
......+|+|+.+.+++++.|. ++ +..+. ..++ ++.++++++++.. .|.+| .|..+..+..+++++. .
T Consensus 320 ~~~i~~~~g~d~~~~~~~~~~g~-l~--~~~~~~~~~~~a~~~~l~~~g~~~--~~~~g~~i~~l~~~~~~~v~~~---~ 391 (452)
T 2qk4_A 320 CQVILPLLKSDLYEVIQSTLDGL-LC--TSLPVWLENHTALTVVMASKGYPG--DYTKGVEITGFPEAQALGLEVF---H 391 (452)
T ss_dssp HHHHGGGBCSCHHHHHHHHHTTC-GG--GGCCCBCTTCEEEEEEEECTTTTS--SCCCSCBCBCHHHHHHTTCEEE---E
T ss_pred HHHHHHHhCCCHHHHHHHHHcCC-CC--cccceecCCCcEEEEEEECCCCCC--CCCCCCcccCccccCCCCcEEE---E
Confidence 3355568999999999999986 32 11122 2345 7888888775432 35556 4543322122455542 1
Q ss_pred CCCccC----CCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009323 443 PDYVVP----PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 443 ~G~~v~----~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
.|..+. .....++|+|+++|+|+++|+++++++++.+.++|.
T Consensus 392 ~G~~~~~~~~~~~~~rv~~v~~~g~~~~~a~~~~~~~~~~i~~~g~ 437 (452)
T 2qk4_A 392 AGTALKNGKVVTHGGRVLAVTAIRENLISALEEAKKGLAAIKFEGA 437 (452)
T ss_dssp SSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTC
T ss_pred CcEEeeCCeEEecCCeEEEEEEecCCHHHHHHHHHHHHhhcccCCc
Confidence 454432 112346899999999999999999999999999885
No 32
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=1.4e-42 Score=365.54 Aligned_cols=371 Identities=14% Similarity=0.125 Sum_probs=278.3
Q ss_pred CCCcEEEEEcCcHHHHHHHHH-HHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 69 CRQEKILVANRGEIAVRVIRT-AHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~a-a~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
++.+||||+|+|.....++.+ ++++| +++++.. .+....+|+. + |.+.+++++++.++|+|
T Consensus 13 ~~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~~-----np~~~~~d~~--i----------d~~~l~~~~~~~~~d~V 74 (412)
T 1vkz_A 13 MKAVRVHILGSGGREHAIGWAFAKQGY-EVHFYPG-----NAGTKRDGTN--H----------PYEGEKTLKAIPEEDIV 74 (412)
T ss_dssp ---CEEEEEECSHHHHHHHHHHHHTTC-EEEEEEC-----CTTGGGTSEE--C----------CCCTHHHHHTSCSSCEE
T ss_pred cccCEEEEECCCHHHHHHHHHHHhCCC-CEEEECC-----Chhhhccccc--C----------CHHHHHHHHHHcCCCEE
Confidence 345699999999776665655 47789 8888832 2345666754 2 35689999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEE
Q 009323 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvK 227 (537)
+|+. |++.++.+++.++. ++||+++++..++||..+|++|+++|||+|++ ..+.+.+++.++++++|||+|||
T Consensus 75 ~~~~----E~~~~a~~~~~l~~-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~e~~~~~~~~g~PvvvK 147 (412)
T 1vkz_A 75 IPGS----EEFLVEGVSNWRSN-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARF--EVAETPEELREKIKKFSPPYVIK 147 (412)
T ss_dssp CCSS----GGGTCC-----CTT-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHTTSCSSEEEE
T ss_pred EECC----cHHHHHHHHHHhhh-hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCE--EEECCHHHHHHHHHhcCCCEEEE
Confidence 9853 66555677888887 78999999999999999999999999999998 67899999999999999999999
Q ss_pred ecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCC-CcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeecccccc---
Q 009323 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGN-DGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSIQRR--- 303 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~-~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~~~~--- 303 (537)
|..|+||+||+++++.+|+.++++.+.... ..|+. ..++||+||+| +|++++++.|++ .++.+.. .+..++.
T Consensus 148 p~~~~gg~Gv~~v~~~~el~~a~~~~~~~~-~~~g~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~~-~~~~~~~~~~ 223 (412)
T 1vkz_A 148 ADGLARGKGVLILDSKEETIEKGSKLIIGE-LIKGVKGPVVIDEFLAG-NELSAMAVVNGR-NFVILPF-VRDYKRLMDG 223 (412)
T ss_dssp ESSCCSSCCEEEESSHHHHHHHHHHHHHTS-SSTTCCSCEEEEECCCS-EEEEEEEEEETT-EEEECCC-CEECCEEETT
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHhhc-cccCCCCeEEEEECCcC-cEEEEEEEECCC-EEEEeee-eEeeeeccCC
Confidence 999999999999999999999998876431 02433 48999999998 999999998754 3333321 1111111
Q ss_pred -----cceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-----CCcceeEEEEEEeCCCCEEEEEEecCCCCc-cccchhh
Q 009323 304 -----NQKLLEEAPSPALTPELRKAMGDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVE-HPVTEMI 372 (537)
Q Consensus 304 -----~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~al-----g~~G~~~vEf~~~~~g~~~~lEiNpR~~g~-~~~~~~~ 372 (537)
......++|++ +++++.+++.+++.+++++| +|.|++++||+++++| +||+|||||+++. +..++..
T Consensus 224 ~~~~~~g~~~~~~P~~-l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~~~~~ 301 (412)
T 1vkz_A 224 DRGPNTGGMGSWGPVE-IPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGD-PYILEYNVRLGDPETEVIVTL 301 (412)
T ss_dssp TEEEECSCSEEEECCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHHHHHHH
T ss_pred CCCCCCCCceEEECCC-CCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEEECCC-cEEEEEecCCCCCcceeehhh
Confidence 11234678988 99999999999999999999 8889999999999989 9999999999876 5556666
Q ss_pred cCCCHHHHHHHHHcCCCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCc-----c
Q 009323 373 SSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYV-----V 447 (537)
Q Consensus 373 ~Gidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~-----v 447 (537)
+|+|+.+.+++++.|...+. . ...+++ .+++++.++. .+.|.+|.+..+.. |+ ++ +. .|.. +
T Consensus 302 ~g~d~~~~~~~~~~g~l~~~---~-~~~~~a-~~~~l~~~~~-~~~~~~g~~i~l~~---~~-~v--~~-~g~~~~~~~~ 368 (412)
T 1vkz_A 302 NPEGFVNAVLEGYRGGKMEP---V-EPRGFA-VDVVLAARGY-PDAPEKGKEITLPE---EG-LI--FF-AGVAEKDGKL 368 (412)
T ss_dssp CHHHHHHHHHHHHHTSCCCC---C-CCCSEE-EEEEEECTTT-TTSCCCCCBCBCCS---SC-CE--EE-SSEEEETTEE
T ss_pred cCCCHHHHHHHHhcCCCccc---c-ccCCeE-EEEEEecCCC-CCCCCCCCEeeeCC---CC-cE--EE-CcccccCCeE
Confidence 99999999999998863211 1 112444 5677766432 23455676433222 33 22 11 3333 2
Q ss_pred CCCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009323 448 PPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 448 ~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
... ++++|+|+++|+|+++|+++++++++.+.++|+
T Consensus 369 ~~~-~~~vg~v~~~g~~~~ea~~~~~~~~~~i~~~g~ 404 (412)
T 1vkz_A 369 VTN-GGRVLHCMGTGETKEEARRKAYELAEKVHFEGK 404 (412)
T ss_dssp EEC-SSEEEEEEEEESSHHHHHHHHHHHHHHCBCTTC
T ss_pred EeC-CCcEEEEEEeCCCHHHHHHHHHHHhcceeeCCC
Confidence 222 456999999999999999999999999999986
No 33
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=100.00 E-value=4e-41 Score=357.06 Aligned_cols=386 Identities=16% Similarity=0.171 Sum_probs=289.4
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcC-CCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G-~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+.+||||+|+|.....+++++++.+ +..+++.. ..+.....++.+.+ ++.|.+.+++++++.++|+|+
T Consensus 20 ~~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~p----gn~g~~~~~~~~~i-------~~~d~~~l~~~a~~~~id~vv 88 (442)
T 3lp8_A 20 GSMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAP----GREGMSGLADIIDI-------DINSTIEVIQVCKKEKIELVV 88 (442)
T ss_dssp CCEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEE----CCGGGTTTSEECCC-------CTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCCEEEEEC----CChHHhhccceeec-------CcCCHHHHHHHHHHhCCCEEE
Confidence 3579999999988889999998874 45555532 12334445555544 478999999999999999999
Q ss_pred eCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEE
Q 009323 149 PGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVM 225 (537)
Q Consensus 149 p~~g~~se~~---~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~Pvv 225 (537)
++. |++ .+++.+++.|++++||+++++.+++||..+|++|+++|||+|++ ..+++.+++.+++++++||+|
T Consensus 89 ~g~----E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~--~~~~~~~ea~~~~~~~g~PvV 162 (442)
T 3lp8_A 89 IGP----ETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKY--GYFVDTNSAYKFIDKHKLPLV 162 (442)
T ss_dssp ECS----HHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCE--EEESSHHHHHHHHHHSCSSEE
T ss_pred ECC----cHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCE--EEECCHHHHHHHHHHcCCcEE
Confidence 864 553 46788999999999999999999999999999999999999998 788999999999999999999
Q ss_pred EEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeee-ecc-cc
Q 009323 226 IKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGER-DCS-IQ 301 (537)
Q Consensus 226 vKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r-~~~-~~ 301 (537)
|||..++||+||+++++.+|+.++++++... ..|+ +..++|||||+| +|+++.++.|+. .++.+... +.. ..
T Consensus 163 vKp~~~~gg~GV~iv~~~eel~~a~~~~~~~--~~~g~~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~~~~~~~~~~ 238 (442)
T 3lp8_A 163 VKADGLAQGKGTVICHTHEEAYNAVDAMLVH--HKFGEAGCAIIIEEFLEG-KEISFFTLVDGS-NPVILGVAQDYKTIG 238 (442)
T ss_dssp EEESSCCTTTSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEESS-CEEEEEEEEECCEEE
T ss_pred EeECCCCCCCeEEEeCCHHHHHHHHHHHHhh--cccCCCCCeEEEEEeecC-cEEEEEEEECCC-eEEEeEEeEeeeecc
Confidence 9999999999999999999999999887632 1233 368999999999 999999999865 55544332 110 10
Q ss_pred -----cccceeEEEcCCCCCCHHHHHHHHHH----HHHHHHHcCC--cceeEEEEEEeCCCCEEEEEEecCCCCc-cccc
Q 009323 302 -----RRNQKLLEEAPSPALTPELRKAMGDA----AVAAAASIGY--IGVGTVEFLLDERGSFYFMEMNTRIQVE-HPVT 369 (537)
Q Consensus 302 -----~~~~~~~~~~p~~~l~~~~~~~i~~~----a~~i~~alg~--~G~~~vEf~~~~~g~~~~lEiNpR~~g~-~~~~ 369 (537)
.+......++|++.+++++.+++.+. +.++++++|+ .|++++||+++++| +||+|+|||+++. +..+
T Consensus 239 ~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g~~~~~~~ 317 (442)
T 3lp8_A 239 DNNKGPNTGGMGSYSKPNIITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIKKNE-PKLLEYNVRFGDPETQSI 317 (442)
T ss_dssp GGGEEEECSCSEEEECTTSSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHHHH
T ss_pred cCCCCCCCCCcEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-eEEEEEecCCCCCchhhh
Confidence 11112356678877899999998887 8899999887 69999999999988 9999999999864 6666
Q ss_pred hhhcCCCHHHHHHHHHcCCCCCCCCCcccc-ceeEEEEEEeeCCCCCCCCCCCC-ceeEEEc-CCCCeEEEe-ee--ccC
Q 009323 370 EMISSVDLIEEQIHVAMGGKLRYKQEDIVL-QGHSIECRINAEDPFKNFRPGPG-RITAYLP-AGGPFVRMD-SH--VYP 443 (537)
Q Consensus 370 ~~~~Gidl~~~~i~~a~G~~l~~~~~~~~~-~g~ai~~ri~ae~~~~~f~p~~G-~i~~~~~-~~~~~vr~~-~~--~~~ 443 (537)
...++.|+++.+++++.|...... +.. ...++ +.+.+...... .+..| .|+.+.. ...+++.+. .. ...
T Consensus 318 ~~~~~~dl~~~~~~~~~G~l~~~~---~~~~~~~a~-~vv~a~~gyp~-~~~~g~~i~g~~~~~~~~~~~~~~ag~~~~~ 392 (442)
T 3lp8_A 318 LPRLNSDFLKLLSLTAKGKLGNES---VELSKKAAL-CVVVASRGYPG-EYKKNSIINGIENIEKLPNVQLLHAGTRREG 392 (442)
T ss_dssp GGGBCSCHHHHHHHHHHTCCSSCC---CCBCSCEEE-EEEEEETTTTS-SCCSSCEEBSHHHHHTCSSEEEEESSEEEET
T ss_pred HHHhCCCHHHHHHHHHcCCCCCCC---ceeccCcEE-EEEEccCCCCC-CCCCCCEeeCCcccccCCCcEEEEeeeeccC
Confidence 667899999999999999753322 222 23444 33444322110 12223 2222211 222455432 11 112
Q ss_pred CCccCCCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009323 444 DYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 444 G~~v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
|..++ .+.+++.|++.|+|.++|+++++++++.+.++|.
T Consensus 393 ~~~~~--~ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~ 431 (442)
T 3lp8_A 393 NNWVS--DSGRVINVVAQGENLASAKHQAYAALDLLDWPDG 431 (442)
T ss_dssp TEEEE--CSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred CeEEe--cCCeEEEEEEecCCHHHHHHHHHHHhcccCCCCC
Confidence 22222 2456999999999999999999999999999985
No 34
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=100.00 E-value=3.1e-41 Score=359.48 Aligned_cols=388 Identities=21% Similarity=0.216 Sum_probs=277.4
Q ss_pred CCcCCCCCcEEEEEcCcHHHHHHHHHH-HHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009323 64 ALKVTCRQEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 64 ~~~~~~~~~kvLi~g~g~~a~~ii~aa-~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~ 142 (537)
-++...+.+||||+|+|.....+++++ +++|++++++++. ++. ....++ .+.+ ++.|.+.+++++++.
T Consensus 14 ~~~~~~~~~~iliiG~g~r~~a~a~~~~~~~g~~~v~~~~~-~~~--~~~~~~-~~~~-------~~~d~~~l~~~~~~~ 82 (451)
T 2yrx_A 14 ENLYFQSHMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPG-NPG--IADVAE-LVHI-------DELDIEALVQFAKQQ 82 (451)
T ss_dssp -CCCCCSSEEEEEEECSHHHHHHHHHHHTCTTEEEEEEEEC-CTT--GGGTSE-ECCC-------CTTCHHHHHHHHHHT
T ss_pred cccccCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECC-Chh--hhhhCc-eecc-------CCCCHHHHHHHHHHc
Confidence 345555568999999997666666555 5689998877542 222 233444 3322 477899999999999
Q ss_pred CCCEEEeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHH
Q 009323 143 GCTMLHPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADE 219 (537)
Q Consensus 143 ~~d~V~p~~g~~se~~---~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ 219 (537)
++|+|+|+. |+. .+++.+++.|++++||+++++..++||..++++|+++|||+|++ ..+.+.+++.+++++
T Consensus 83 ~~d~vi~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~ 156 (451)
T 2yrx_A 83 AIDLTIVGP----EAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADH--AAFTSYEEAKAYIEQ 156 (451)
T ss_dssp TCSEEEECS----HHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHH
T ss_pred CCCEEEECC----chHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHh
Confidence 999999864 443 46677889999999999999999999999999999999999998 678999999999999
Q ss_pred hCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEeccCCCcEEEEEEEEeCCCcEEEE-ee-
Q 009323 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHF-GE- 295 (537)
Q Consensus 220 ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~-~~- 295 (537)
++||+||||..|+||+||+++++.+|+.++++.+... ..|+ +..++||+||+| +|+++.++.|+ +.+.. ..
T Consensus 157 ~~~PvVvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~G-~E~sv~~~~dG--~~~~~~~~~ 231 (451)
T 2yrx_A 157 KGAPIVIKADGLAAGKGVTVAQTVEEALAAAKAALVD--GQFGTAGSQVVIEEYLEG-EEFSFMAFVNG--EKVYPLAIA 231 (451)
T ss_dssp HCSSEEEEECC----CCEEEESSHHHHHHHHHHHHHH--SCCBTTBCCEEEEECCCS-EEEEEEEEEET--TEEEECCCB
T ss_pred cCCcEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhc--cccCCCCCeEEEEECCcC-cEEEEEEEEcC--CEEEEeeeE
Confidence 9999999999999999999999999999999887652 2233 368999999998 89999999864 43332 21
Q ss_pred eec-ccc-----cccceeEEEcCCCCCCHHHHHHH-HHHHHHHHHHc-----CCcceeEEEEEEeCCCCEEEEEEecCCC
Q 009323 296 RDC-SIQ-----RRNQKLLEEAPSPALTPELRKAM-GDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQ 363 (537)
Q Consensus 296 r~~-~~~-----~~~~~~~~~~p~~~l~~~~~~~i-~~~a~~i~~al-----g~~G~~~vEf~~~~~g~~~~lEiNpR~~ 363 (537)
+.. ... .........+|++.+++++.+++ .+++.++++++ +|.|++++||+++++| +||+|||||++
T Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~~g-~~viEiN~R~g 310 (451)
T 2yrx_A 232 QDHKRAYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANG-PKVIEFNARFG 310 (451)
T ss_dssp EECCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCC
T ss_pred EeccccccCCCCCCCCCCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeCCC-cEEEEEecCCC
Confidence 100 000 00111234578766889888888 66777777765 6779999999999989 99999999998
Q ss_pred Ccc-ccchhhcCCCHHHHHHHHHcCCCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCc-eeEEEcCCCCeEEEeeec
Q 009323 364 VEH-PVTEMISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGR-ITAYLPAGGPFVRMDSHV 441 (537)
Q Consensus 364 g~~-~~~~~~~Gidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~-i~~~~~~~~~~vr~~~~~ 441 (537)
++. ......+|+|+.+.+++++.|...+.. ...++++...+.+...- ..|..|. |..+.... |++.+..
T Consensus 311 ~~~~~~i~~~~g~d~~~~~~~~~~g~~~~~~----~~~~~~~~~~l~~~g~p--~~~~~g~~i~~~~~~~-~~~~v~~-- 381 (451)
T 2yrx_A 311 DPEAQVVLPRLKTDLVEAVLAVMDGKELELE----WTDEAVLGVVLAAKGYP--GAYERGAEIRGLDRIS-PDALLFH-- 381 (451)
T ss_dssp TTHHHHHGGGBCSCHHHHHHHHHTTCCCCCC----BCSSEEEEEEEEETTTT--SSCCCCCEEBCGGGSC-TTSEEEE--
T ss_pred CcHHHHHHHHcCCCHHHHHHHHhcCCCCCcc----ccCCceEEEEEecCCcC--CCCCCCCcCcCccccC-CCCEEEe--
Confidence 763 345567999999999999999754321 11235554455432110 0122232 22111111 4444321
Q ss_pred cCCCccC----CCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009323 442 YPDYVVP----PSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 442 ~~G~~v~----~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
.|..+. .....++|+|++.|+|.++|+++++++++.+.++|.
T Consensus 382 -~G~~~~~~~~~~~~~rvg~v~~~g~~~~ea~~~~~~~~~~i~~~~~ 427 (451)
T 2yrx_A 382 -AGTKREGGAWYTNGGRVLLLAAKGETLAKAKEKAYEQLAAIDCDGL 427 (451)
T ss_dssp -SSEEEETTEEEECSSEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred -CcccccCCeEEcCCCeEEEEEEEeCCHHHHHHHHHHHhhccccCCe
Confidence 233321 111346999999999999999999999999999886
No 35
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=100.00 E-value=1.4e-40 Score=352.02 Aligned_cols=391 Identities=17% Similarity=0.175 Sum_probs=285.0
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~ad-~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
++||||+|+|.....+++++++.+. ..+.+. ..+ .-....++ ..+.+ ++.|.+.+++++++.++|+|+
T Consensus 3 ~mkvlviG~ggre~ala~~l~~s~~v~~v~~~-pgn--~g~~~~~~~~~~~~-------~~~d~~~l~~~a~~~~id~vv 72 (431)
T 3mjf_A 3 AMNILIIGNGGREHALGWKAAQSPLADKIYVA-PGN--AGTALEPTLENVDI-------AATDIAGLLAFAQSHDIGLTI 72 (431)
T ss_dssp CEEEEEEECSHHHHHHHHHHTTCTTEEEEEEE-ECC--HHHHHCTTCEECCC-------CTTCHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-CCC--HHHhhhcccceecC-------CcCCHHHHHHHHHHhCcCEEE
Confidence 4699999999888899999988864 333332 221 11122333 22322 478899999999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEe
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp 228 (537)
|+.+... ...+++.+++.|++++||+++++.+++||..+|++|+++|||+|++ ..+++.+++.+++++++||+||||
T Consensus 73 ~g~e~~l-~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~--~~~~~~~ea~~~~~~~g~PvVvKp 149 (431)
T 3mjf_A 73 VGPEAPL-VIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEY--QNFTDVEAALAYVRQKGAPIVIKA 149 (431)
T ss_dssp ECSHHHH-HTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCE--EEESCHHHHHHHHHHHCSSEEEEE
T ss_pred ECCchHH-HHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCe--EeeCCHHHHHHHHHHcCCeEEEEE
Confidence 8753210 1247788999999999999999999999999999999999999999 788999999999999999999999
Q ss_pred cCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeec--cccc--
Q 009323 229 TAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC--SIQR-- 302 (537)
Q Consensus 229 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~--~~~~-- 302 (537)
..++||+||+++++.+|+.++++++... ..|+ +..++|||||+| +|+++.++.|+. +++.+..... ....
T Consensus 150 ~~~~gg~GV~iv~~~~el~~a~~~~~~~--~~~g~~~~~vlvEe~i~G-~E~sv~~~~dg~-~~~~~~~~~~~~~~~~~~ 225 (431)
T 3mjf_A 150 DGLAAGKGVIVAMTQEEAETAVNDMLAG--NAFGDAGHRIVVEEFLDG-EEASFIVMVDGE-NVLPMATSQDHKRVGDGD 225 (431)
T ss_dssp SSSCTTCSEEEECSHHHHHHHHHHHHTT--HHHHCCCCCEEEEECCCS-EEEEEEEEEESS-CEEECCCBEECCEEETTT
T ss_pred CCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccccCCCCeEEEEEeeCC-cEEEEEEEEcCC-EEEEEEeeEeceecccCC
Confidence 9999999999999999999999887632 1232 358999999999 999999999865 6766643210 0000
Q ss_pred ---ccceeEEEcCCCCCCHHHHHHHHHH----HHHHHHHcCC--cceeEEEEEEeCCCCEEEEEEecCCCCc-cccchhh
Q 009323 303 ---RNQKLLEEAPSPALTPELRKAMGDA----AVAAAASIGY--IGVGTVEFLLDERGSFYFMEMNTRIQVE-HPVTEMI 372 (537)
Q Consensus 303 ---~~~~~~~~~p~~~l~~~~~~~i~~~----a~~i~~alg~--~G~~~vEf~~~~~g~~~~lEiNpR~~g~-~~~~~~~ 372 (537)
+......++|++.++++..+++.+. +.++++++|+ .|++++||+++++|++||||+|||++.. ..+....
T Consensus 226 ~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~ve~~~~~~g~~~viEiN~R~G~~~~~~i~~~ 305 (431)
T 3mjf_A 226 TGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIMLR 305 (431)
T ss_dssp EEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEECTTSCEEEEEECGGGSTTTHHHHHHH
T ss_pred CCCCCCCceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEeCCCCeEEEEEecCCCCcHHHHHHHH
Confidence 1112244678887899999888876 6777777765 7999999999988899999999999522 2334478
Q ss_pred cCCCHHHHHHHHHcCCCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCc-eeEEEcCCCCeEEEe-ee--ccCC-Ccc
Q 009323 373 SSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGR-ITAYLPAGGPFVRMD-SH--VYPD-YVV 447 (537)
Q Consensus 373 ~Gidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~-i~~~~~~~~~~vr~~-~~--~~~G-~~v 447 (537)
+|+|+++.+++++.|........ ...+.++.+.+.+...-. .+..|. |+.+.....+++.+. .. ...| ..+
T Consensus 306 ~g~dl~~~~~~~~~G~l~~~~~~--~~~~~a~~vv~a~~gyp~--~~~~g~~i~~~~~~~~~~~~~~~ag~~~~~~~~~~ 381 (431)
T 3mjf_A 306 MRSDLVELCLAGTQGKLNEKTSD--WDERPSLGVVLAAGGYPA--DYRQGDVIHGLPQQEVKDGKVFHAGTKLNGNHEVV 381 (431)
T ss_dssp BCSCHHHHHHHHHTTCGGGCCCC--BCSSCEEEEEEEETTTTS--CCCCCCBCBCCCSSCBTTEEEEESSEEECTTSCEE
T ss_pred HCCCHHHHHHHHHcCCCCCCCcc--ccCCcEEEEEecCCCcCc--cCCCCCEeeCCccccCCCcEEEEeeeEecCCCEEE
Confidence 99999999999999985332111 123455544443322111 122332 332221111354431 11 1223 233
Q ss_pred CCCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009323 448 PPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 448 ~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
+. +.+++.|++.|+|.++|.++++++++.+.++|.
T Consensus 382 ~~--ggRv~~v~~~g~~~~~A~~~a~~~~~~i~~~~~ 416 (431)
T 3mjf_A 382 TN--GGRVLCVTALGETVAQAQQYAYQLAEGIQWEGV 416 (431)
T ss_dssp EC--SSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTE
T ss_pred ec--CCeEEEEEEecCCHHHHHHHHHHHhccCCCCCc
Confidence 22 457999999999999999999999999999985
No 36
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=100.00 E-value=3e-40 Score=349.03 Aligned_cols=380 Identities=18% Similarity=0.216 Sum_probs=277.5
Q ss_pred cEEEEEcCcHHHHHHHHHH-HHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa-~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
+||||+|+|.....+++++ +++|++++++++. + .....++| .+.+ ++.|.+.+++++++.++|+|+|+
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~--~~~~~~~~-~~~~-------~~~d~~~l~~~~~~~~~d~v~~~ 69 (422)
T 2xcl_A 1 MNVLIIGKGGREHTLAWKAAQSSLVENVFAAPG-N--DGMAASAQ-LVNI-------EESDHAGLVSFAKQNQVGLTIVG 69 (422)
T ss_dssp CEEEEEECSHHHHHHHHHHTTCTTCSEEEEEEC-C--GGGTTTCE-ECCC-------CTTCHHHHHHHHHHTTEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEeCC-C--hhhhhhcc-cccc-------CcCCHHHHHHHHHHcCCCEEEEC
Confidence 4799999997666666665 4589999888643 2 22334555 3322 47899999999999999999986
Q ss_pred CCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEE
Q 009323 151 YGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 151 ~g~~se~~---~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvK 227 (537)
. |+. .+++.++..|++++||+++++..++||..+|++|+++|||+|++ ..+.+.+++.+++++++||+|||
T Consensus 70 ~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~--~~~~~~~~~~~~~~~~~~P~vvK 143 (422)
T 2xcl_A 70 P----EVPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEY--ETFTSFDEAKAYVQEKGAPIVIK 143 (422)
T ss_dssp S----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCE--EEESCHHHHHHHHHHHCSSEEEE
T ss_pred C----cHHHHHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCe--EEECCHHHHHHHHHhcCCCEEEE
Confidence 4 443 46677889999999999999999999999999999999999998 67899999999999999999999
Q ss_pred ecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeee-ec-ccc--
Q 009323 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG--NDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGER-DC-SIQ-- 301 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r-~~-~~~-- 301 (537)
|..|+||+||+++++.+|+.++++.+... ..|+ +..+++|+||+| +|+++.++.|+. .++.+... .. ...
T Consensus 144 p~~~~~g~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~g-~E~sv~~~~dG~-~~~~~~~~~~~~~~~~~ 219 (422)
T 2xcl_A 144 ADGLAAGKGVTVAMTEEEAIACLHDFLED--EKFGDASASVVIEEYLSG-EEFSLMAFVKGE-KVYPMVIAQDHKRAFDG 219 (422)
T ss_dssp ESSCGGGTCEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCCS-EEEEEEEEEETT-EEEECCCBEEEEEEEGG
T ss_pred eCCCCCCCcEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCcC-cEEEEEEEEcCC-EEEecceeeeeehhcCC
Confidence 99999999999999999999999887541 1122 368999999998 999999998643 23322221 00 000
Q ss_pred ---cccceeEEEcCCCCCCHHHHHHHH-HHHHHHHHHc-----CCcceeEEEEEEeCCCCEEEEEEecCCCCcc-ccchh
Q 009323 302 ---RRNQKLLEEAPSPALTPELRKAMG-DAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQVEH-PVTEM 371 (537)
Q Consensus 302 ---~~~~~~~~~~p~~~l~~~~~~~i~-~~a~~i~~al-----g~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~-~~~~~ 371 (537)
.........+|++.+++++.+++. +++.++++++ +|.|++++||+++++| +||+|||||++++. .....
T Consensus 220 ~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~~~~g-~~viEiN~R~g~~~~~~i~~ 298 (422)
T 2xcl_A 220 DKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLTENG-SKVIEFNARFGDPETQVVLP 298 (422)
T ss_dssp GEEEEEEEEEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEETTE-EEEEEEESSCCTTTHHHHGG
T ss_pred CCCCCCCCCeeEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEEeCCC-cEEEEEecCCCCcHHHHHHH
Confidence 011112245787668888888884 4777777765 6779999999999989 99999999998763 34566
Q ss_pred hcCCCHHHHHHHHHcCCCCCCCCCccccceeEEEEEEeeCCCCCCCCCCCCc-eeEEEcCCCCeEEEeeeccCCCc----
Q 009323 372 ISSVDLIEEQIHVAMGGKLRYKQEDIVLQGHSIECRINAEDPFKNFRPGPGR-ITAYLPAGGPFVRMDSHVYPDYV---- 446 (537)
Q Consensus 372 ~~Gidl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~-i~~~~~~~~~~vr~~~~~~~G~~---- 446 (537)
.+|+|+.+.+++++.|...+.. ...++++.+.+....... .+..|. +..+.... |++++.. .|..
T Consensus 299 ~~g~d~~~~~~~~~~g~l~~~~----~~~~~~~~~~~~~~g~~~--~~~~g~~i~~~~~~~-~~~~~~~---~g~~~~~~ 368 (422)
T 2xcl_A 299 RMESDLVQVLLDLLDDKEVDLR----WKDTAAVSVVLASEGYPE--SYAKGTPIGSLAAET-EQVVVFH---AGTKAEGG 368 (422)
T ss_dssp GBCSCHHHHHHHHHTTCCCCCC----BCSCEEEEEEEEETTTTS--CCCSCCBCCCCCCCS-SSEEEEE---SSEEECSS
T ss_pred hcCCCHHHHHHHHHcCCcCccc----ccCCceEEEEEECCCCCC--CCCCCCcccCcccCC-CCcEEEE---eeeEeeCC
Confidence 7999999999999998644221 123345555554431100 011121 22121111 5665421 2322
Q ss_pred -cCCCCCcccEEEEEEcCCHHHHHHHHHHhhhcceEeee
Q 009323 447 -VPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGV 484 (537)
Q Consensus 447 -v~~~~ds~ig~vi~~g~~~~ea~~~~~~al~~~~i~g~ 484 (537)
....+++ +|+|+++|+|.++|+++++++++.+.++|.
T Consensus 369 ~~~~~~~r-~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~ 406 (422)
T 2xcl_A 369 EFVTNGGR-VANVTAFDETFEAARDRVYKAVDEIFKPGL 406 (422)
T ss_dssp SEEECSSE-EEEEEEEESSHHHHHHHHHHHHHHHCCTTE
T ss_pred EEEeCCCc-eEEEEEEeCCHHHHHHHHHHHHhcceeCCc
Confidence 2223344 889999999999999999999999999875
No 37
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=1.9e-38 Score=368.88 Aligned_cols=362 Identities=19% Similarity=0.276 Sum_probs=274.5
Q ss_pred CCcEEEEEcCcHH-----------HHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHH
Q 009323 70 RQEKILVANRGEI-----------AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 70 ~~~kvLi~g~g~~-----------a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~ 138 (537)
+.+||||+|+|.+ +.+++++|+++|+++++++++++..+.+...+|+.+ +. ..+.+.+.++
T Consensus 558 ~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~~G~~vi~v~~np~~~s~~~~~ad~~~-~~-------p~~~e~v~~i 629 (1073)
T 1a9x_A 558 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLY-FE-------PVTLEDVLEI 629 (1073)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEE-CC-------CCSHHHHHHH
T ss_pred cCcEEEEecCCccccccccccchhHHHHHHHHHhcCCEEEEEecCCcccccccccccEEE-ec-------cchhhhhhhh
Confidence 4579999999985 467899999999999999877776666677788876 32 3678999999
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHH
Q 009323 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLAD 218 (537)
Q Consensus 139 a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~ 218 (537)
++..++|+|++.+|... ...++..++..|++++||+++++..+.||..++++|+++|||+|++ ..+.+.+++.++++
T Consensus 630 ~~~e~~d~Vi~~~g~~~-~~~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~--~~~~s~eea~~~~~ 706 (1073)
T 1a9x_A 630 VRIEKPKGVIVQYGGQT-PLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPAN--ATVTAIEMAVEKAK 706 (1073)
T ss_dssp HHHHCCSEEECSSSTHH-HHTTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCE--EECCSHHHHHHHHH
T ss_pred hhhcCcceEEeecCCch-HHHHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCc--eEECCHHHHHHHHH
Confidence 99999999999876421 1356788899999999999999999999999999999999999999 78899999999999
Q ss_pred HhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeec
Q 009323 219 ELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDC 298 (537)
Q Consensus 219 ~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~ 298 (537)
++|||+||||..|+||+||.+|++.+|+.++++.+... .++.+++||+||+|.+|++|+++.|+. .++..+..+.
T Consensus 707 ~ig~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~~----~~~~~vlvEefI~g~~E~~V~~l~d~~-~v~~~~i~e~ 781 (1073)
T 1a9x_A 707 EIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSV----SNDAPVLLDHFLDDAVEVDVDAICDGE-MVLIGGIMEH 781 (1073)
T ss_dssp HHCSSEEEEC-------CEEEECSHHHHHHHHHHCC------------EEEBCCTTCEEEEEEEEECSS-CEEEEEEEEE
T ss_pred HcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHhh----CCCCcEEEEEccCCCcEEEEEEEEECC-eEEEEeeEEE
Confidence 99999999999999999999999999999999876432 234689999999995599999999865 4444333221
Q ss_pred cccc---ccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCC
Q 009323 299 SIQR---RNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSV 375 (537)
Q Consensus 299 ~~~~---~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gi 375 (537)
+.+ +........|+..++++..+++.+++.++++++|+.|++++||+++ +|++||+|||||+++++++++.++|+
T Consensus 782 -~~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v~-~~~~~viEvNpR~~~~~~~~~~~tGi 859 (1073)
T 1a9x_A 782 -IEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVK-NNEVYLIEVNPRAARTVPFVSKATGV 859 (1073)
T ss_dssp -SSCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC-SSCEEEEEEECSCCTTHHHHHHHHSC
T ss_pred -EeccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEE-CCeEEEEEEECCCccHHHHHHHHHCc
Confidence 111 1122334567766999999999999999999999999999999997 56699999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCC---CCCCccccceeEEEEEEeeCCCCCCCCCCCCceeEEEcCCCCeEEEeeeccCCCccCCCCC
Q 009323 376 DLIEEQIHVAMGGKLR---YKQEDIVLQGHSIECRINAEDPFKNFRPGPGRITAYLPAGGPFVRMDSHVYPDYVVPPSYD 452 (537)
Q Consensus 376 dl~~~~i~~a~G~~l~---~~~~~~~~~g~ai~~ri~ae~~~~~f~p~~G~i~~~~~~~~~~vr~~~~~~~G~~v~~~~d 452 (537)
|+++.++++++|.+++ +.+. ..+.++++.++++.........| .+.|...
T Consensus 860 ~l~~~~~~~~~G~~l~~~~~~~~-~~~~~~~vk~~~~~f~~~~~~d~--------------------------~lg~~~~ 912 (1073)
T 1a9x_A 860 PLAKVAARVMAGKSLAEQGVTKE-VIPPYYSVKEVVLPFNKFPGVDP--------------------------LLGPEMR 912 (1073)
T ss_dssp CHHHHHHHHHTTCCHHHHTCCSC-CCCSSEEEEEEECGGGGCTTSCC--------------------------CCCSSCC
T ss_pred CHHHHHHHHHcCCCchhcccCcC-cCCCeEEEEeccCCcccCCCCcC--------------------------CCCCccc
Confidence 9999999999999873 2222 22256777777653211000000 0111112
Q ss_pred cccEEEEEEcCCHHHHHHHHHHhhh
Q 009323 453 SLLGKLIVWAPTREKAIERMKRALN 477 (537)
Q Consensus 453 s~ig~vi~~g~~~~ea~~~~~~al~ 477 (537)
+ .|.+++.|.|.++|..++..+..
T Consensus 913 s-tGev~g~~~~~~~a~~ka~~~~~ 936 (1073)
T 1a9x_A 913 S-TGEVMGVGRTFAEAFAKAQLGSN 936 (1073)
T ss_dssp C-CEEEEEEESSHHHHHHHHHHHTT
T ss_pred c-cCceEEecCCHHHHHHhhHHhcc
Confidence 2 57777788888888777777664
No 38
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=4e-37 Score=314.38 Aligned_cols=294 Identities=15% Similarity=0.150 Sum_probs=212.5
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHc-C-CCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEM-G-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~-G-~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
||.+||||+|+|.. ..+++++++. | ++|++++++ +..+...++|+.+.++ ..++..+.+.+++++++.++|+
T Consensus 2 m~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~--~~~~~~~~~d~~~~~~---~~~~~~~~~~l~~~~~~~~~d~ 75 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCS--PLASALYMADQHYIVP---KIDEVEYIDHLLTLCQDEGVTA 75 (331)
T ss_dssp TTCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESC--TTCGGGGGSSSEEECC---CTTSTTHHHHHHHHHHHHTCCE
T ss_pred CccceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCC--CcchhHHhhhceecCC---CCCChhHHHHHHHHHHHcCCCE
Confidence 45679999998876 5688888886 7 899998654 4455667889888663 1222345789999999999999
Q ss_pred EEeCCCccccc-HHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHH--HHhCCc
Q 009323 147 LHPGYGFLAEN-AVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLA--DELGFP 223 (537)
Q Consensus 147 V~p~~g~~se~-~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~--~~ig~P 223 (537)
|+|+.+..... +..++.++..|++++||+++++..++||..++++|+++|||+|+++ . +.+++.+++ ++++||
T Consensus 76 vi~~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~--~--~~~~~~~~~~~~~~~~P 151 (331)
T 2pn1_A 76 LLTLIDPELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTY--A--TMASFEEALAAGEVQLP 151 (331)
T ss_dssp EEESSHHHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEE--S--SHHHHHHHHHTTSSCSC
T ss_pred EEeCCchhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcEE--e--cHHHhhhhhhcccCCCC
Confidence 99986532211 2345667777999999999999999999999999999999999983 2 466776666 478999
Q ss_pred EEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEe-CCCcEEEEeeeeccccc
Q 009323 224 VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLAD-KYGNVVHFGERDCSIQR 302 (537)
Q Consensus 224 vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d-~~g~v~~~~~r~~~~~~ 302 (537)
+|+||..|+||+|++++++.+|+.++++. ...+++|+||+| +|+++.++.| .+|+++.+..+.+...+
T Consensus 152 ~vvKp~~g~g~~gv~~v~~~~el~~~~~~----------~~~~lvee~i~G-~e~~v~~~~d~~~G~~~~~~~~~~~~~~ 220 (331)
T 2pn1_A 152 VFVKPRNGSASIEVRRVETVEEVEQLFSK----------NTDLIVQELLVG-QELGVDAYVDLISGKVTSIFIKEKLTMR 220 (331)
T ss_dssp EEEEESBC---------------------------------CEEEEECCCS-EEEEEEEEECTTTCCEEEEEEEEEEEEE
T ss_pred EEEEeCCCCCCCCeEEeCCHHHHHHHHHh----------CCCeEEEecCCC-cEEEEEEEEecCCCeEEEEEEEEEEEec
Confidence 99999999999999999999999987754 258999999999 9999999998 77888876555432222
Q ss_pred ccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHH
Q 009323 303 RNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQI 382 (537)
Q Consensus 303 ~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i 382 (537)
.. .....+.. . .+++.+.+.++++++|+.|++++||+.+ +|++||+|||||++|+.. ....+|+|++++++
T Consensus 221 ~g--~~~~~~~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~-~g~~~~iEiN~R~~g~~~-~~~~~G~~~~~~~~ 291 (331)
T 2pn1_A 221 AG--ETDKSRSV-L----RDDVFELVEHVLDGSGLVGPLDFDLFDV-AGTLYLSEINPRFGGGYP-HAYECGVNFPAQLY 291 (331)
T ss_dssp TT--EEEEEEEE-C----CHHHHHHHHHHHTTTCCCEEEEEEEEEE-TTEEEEEEEESSCCTTHH-HHHHTTCCHHHHHH
T ss_pred CC--ceeEeEEe-c----cHHHHHHHHHHHHHhCCcceEEEEEEEc-CCCEEEEEEeCCCCCchH-HHHHcCCCHHHHHH
Confidence 11 11112211 2 2567889999999999999999999964 566999999999988875 46789999999999
Q ss_pred HHHcCCCCCC
Q 009323 383 HVAMGGKLRY 392 (537)
Q Consensus 383 ~~a~G~~l~~ 392 (537)
+.++|.+++.
T Consensus 292 ~~~~g~~~~~ 301 (331)
T 2pn1_A 292 RNLMHEINVP 301 (331)
T ss_dssp HHHTTCCCCC
T ss_pred HHHcCCCCCc
Confidence 9999998753
No 39
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=100.00 E-value=1.9e-37 Score=320.21 Aligned_cols=301 Identities=18% Similarity=0.181 Sum_probs=223.3
Q ss_pred CcEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhhh-----------ccC----EEEEcCCCCCC
Q 009323 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-----------LAD----ESVCIGEAPSS 126 (537)
Q Consensus 71 ~~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-----------~ad----~~~~i~~~~~~ 126 (537)
.|||.|+-+|. +|..+++++++.||+++.++.+.+....+.. ..| ....+......
T Consensus 3 kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (357)
T 4fu0_A 3 NKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGITRSGEWYHYTGEKEKILNNTWFEDSKNLCPVVVSQNRSV 82 (357)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTCCEEEECSCTHHHHTTCGGGCGGGEEEEEECCCTTT
T ss_pred CCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEEeCCCceeecCCCHHHhhcCcchhhhhccccccccccccc
Confidence 46887775442 3677999999999999999765542211110 111 11111111100
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCc
Q 009323 127 QSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG 205 (537)
Q Consensus 127 ~~~~~~~~i~~~a~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~ 205 (537)
....+......+..++|+|+|. +|++.|+..++.+++.+|++++||++.++..+.||..+|++|+++|||+|++ .
T Consensus 83 --~~~~~~~~~~~~~~~~D~vf~~l~G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~ 158 (357)
T 4fu0_A 83 --KGFLEIASDKYRIIKVDLVFPVLHGKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKS--V 158 (357)
T ss_dssp --CEEEEC----CEEEECSEEEECCCSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCE--E
T ss_pred --cchhhhhhhhHhhcCCCEEEECCcCccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCE--E
Confidence 0011123334455679999999 8999999999999999999999999999999999999999999999999998 3
Q ss_pred cCCC---HHHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEE
Q 009323 206 LLQS---TEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQV 282 (537)
Q Consensus 206 ~~~s---~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v 282 (537)
.+.+ ..++.++.+++|||+||||..|++|+|+++|++.+||.++++.+... +..+++|+||+| +|+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~~------~~~vlvE~~i~G-~e~~v~v 231 (357)
T 4fu0_A 159 TFKRFNEEAAMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFEH------DTEVIVEETING-FEVGCAV 231 (357)
T ss_dssp EEEGGGHHHHHHHHHHHCCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTTT------CSEEEEEECCCS-EEEEEEE
T ss_pred eecCCChHHHHHHHHHhcCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhcc------CCeEEEEEecCC-EEEEEEE
Confidence 4433 33456677899999999999999999999999999999999876543 478999999999 9999999
Q ss_pred EEeCCCcEEEEeee--ecccccccce-----eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEE
Q 009323 283 LADKYGNVVHFGER--DCSIQRRNQK-----LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYF 355 (537)
Q Consensus 283 ~~d~~g~v~~~~~r--~~~~~~~~~~-----~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~ 355 (537)
+.++.+.+..+.+. .+.+.++..+ .....|+. +++++.+++.++|.+++++||+.|++++||++|++|++||
T Consensus 232 l~~~~~~~~~v~~~~~~~~~~d~~~k~~~~~~~~~~pa~-l~~~~~~~i~~~A~~~~~aLg~~G~~~VDf~~~~dg~~~v 310 (357)
T 4fu0_A 232 LGIDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPAR-IDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYTPSGEIVF 310 (357)
T ss_dssp EESSSEEECCCEEEEECHHHHTSCSBCSSCCEEEESSCS-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEE
T ss_pred EecCCceEEEEEEEEcccccccccccccCCCceEecCCC-CCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEeCCCCEEE
Confidence 98865443333222 2223333332 22345665 9999999999999999999999999999999999999999
Q ss_pred EEEecCCCCc----cccchhhcCCCHHHHHHH
Q 009323 356 MEMNTRIQVE----HPVTEMISSVDLIEEQIH 383 (537)
Q Consensus 356 lEiNpR~~g~----~~~~~~~~Gidl~~~~i~ 383 (537)
+|||||++-+ .|....++|+|+.++.-+
T Consensus 311 lEvNt~PG~t~~S~~p~~~~~~G~~~~~li~~ 342 (357)
T 4fu0_A 311 NEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDK 342 (357)
T ss_dssp EEEESSCCCSTTCHHHHHHHTTTCCHHHHHHH
T ss_pred EEEeCCCCCCcccHHHHHHHHhCcCHHHHHHH
Confidence 9999999654 233445689987665433
No 40
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=100.00 E-value=4e-35 Score=298.08 Aligned_cols=277 Identities=21% Similarity=0.231 Sum_probs=216.7
Q ss_pred CCCcEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHH
Q 009323 69 CRQEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 69 ~~~~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a 139 (537)
.|++||+|+.+|. ++..+++++++.|++++.+++... . + ...
T Consensus 11 ~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~-~------------~----------------~~l 61 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER-P------------L----------------SAL 61 (317)
T ss_dssp GGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS-C------------T----------------THH
T ss_pred hhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc-h------------H----------------HHh
Confidence 3567888888764 478999999999999999952211 0 0 011
Q ss_pred HHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHH-
Q 009323 140 ISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLA- 217 (537)
Q Consensus 140 ~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~- 217 (537)
...++|+|+|. +|...|+..++.+++.+|++++|++++++..+.||..++++|+++|||+|++ ..+.+.+++.+++
T Consensus 62 ~~~~~D~v~~~~hg~~ge~~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~~ 139 (317)
T 4eg0_A 62 KDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPF--ETVMRGDDYAARAT 139 (317)
T ss_dssp HHTTCCEEEECCCSGGGTSSHHHHHHHHHTCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEETTSCHHHHHH
T ss_pred hhcCCCEEEEcCCCCCCchHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCE--EEEECchhHHHHHH
Confidence 34679999998 4555688889999999999999999999999999999999999999999998 5667766666666
Q ss_pred ---HHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccC-CCcEEEEEEEEeCCCcEEEE
Q 009323 218 ---DELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQ-NPRHIEFQVLADKYGNVVHF 293 (537)
Q Consensus 218 ---~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~-g~~e~~v~v~~d~~g~v~~~ 293 (537)
+++|||+||||..|+||+|++++++.+|+.++++.+... +..++||+||+ | +|+++.++.++.+.++.+
T Consensus 140 ~~~~~~g~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~~lvEe~i~~G-~E~~v~vl~~~~~~~~~i 212 (317)
T 4eg0_A 140 DIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAATH------DKIVIVEKSIEGG-GEYTACIAGDLDLPLIKI 212 (317)
T ss_dssp HHHHHHCSCEEEEECC-----CCEEECSGGGHHHHHHHHTTT------CSEEEEEECCCSS-EEEEEEEETTCCCCCEEE
T ss_pred HHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhC------CCeEEEEcCCCCC-cEEEEEEECCcccceEEE
Confidence 889999999999999999999999999999999875422 47899999999 8 999999998766555554
Q ss_pred eeeecccccccc-----eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCc---
Q 009323 294 GERDCSIQRRNQ-----KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVE--- 365 (537)
Q Consensus 294 ~~r~~~~~~~~~-----~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~--- 365 (537)
.... .+..... .....+|+. ++++..+++.+.+.++++++|++|++++||+++++|++||+|||||++..
T Consensus 213 ~~~~-~~~~~~~k~~~g~~~~~~P~~-l~~~~~~~l~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~~pg~t~~s 290 (317)
T 4eg0_A 213 VPAG-EFYDYHAKYVANDTQYLIPCG-LPAEQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDHS 290 (317)
T ss_dssp EC----------------CEEESSCS-SCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTCCEEEEEEESSCCCSTTS
T ss_pred eeCC-ceechhhcccCCCeeEEcCCC-CCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEeCCCCEEEEEeeCCCCCCccc
Confidence 3221 1111111 233557876 89999999999999999999999999999999988999999999999754
Q ss_pred -cccchhhcCCCHHHHHHHHH
Q 009323 366 -HPVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 366 -~~~~~~~~Gidl~~~~i~~a 385 (537)
.+......|+|+.+...++.
T Consensus 291 ~~p~~~~~~G~~~~~l~~~li 311 (317)
T 4eg0_A 291 LPPKAARSIGIGYSELVVKVL 311 (317)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHH
Confidence 23344578999998877764
No 41
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=100.00 E-value=2.8e-34 Score=298.57 Aligned_cols=302 Identities=18% Similarity=0.210 Sum_probs=227.6
Q ss_pred CcEEEEEcCcH---------HHHHHHHHH-HHcCCCEEEEecCCCCCChh-------------hhcc-CEEEEcCCCCCC
Q 009323 71 QEKILVANRGE---------IAVRVIRTA-HEMGIPCVAVYSTIDKDALH-------------VKLA-DESVCIGEAPSS 126 (537)
Q Consensus 71 ~~kvLi~g~g~---------~a~~ii~aa-~~~G~~vv~v~~~~d~~~~~-------------~~~a-d~~~~i~~~~~~ 126 (537)
.+||+|+.+|. ++..+++++ ++.||+++.++.+.+..... ..+. +....+. .
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 78 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFMKTVD----A 78 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEECTTSCBCCHHHHHHHHTTCCHHHHHHHHHTSCC----T
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEcCCCCEEecccccccccccchhhhccccccccc----c
Confidence 45888888662 378899999 99999999997655432110 0011 0000000 0
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCc
Q 009323 127 QSYLLIPNVLSAAISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG 205 (537)
Q Consensus 127 ~~~~~~~~i~~~a~~~~~d~V~p~~-g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~ 205 (537)
..+.....+.. +..++|+|+|.. |...|+..++.+++.+|++++|++++++..+.||..++++|+++|||+|++ .
T Consensus 79 ~~~~~~~~~~~--~~~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~ 154 (377)
T 1ehi_A 79 SDPLARIHALK--SAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKY--I 154 (377)
T ss_dssp TCTTCTTGGGG--TTCCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCE--E
T ss_pred ccccCcchhhc--cccCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCE--E
Confidence 00100001111 135799999985 777788788899999999999999999999999999999999999999998 5
Q ss_pred cCCCHHH----HHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEE
Q 009323 206 LLQSTEE----AVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQ 281 (537)
Q Consensus 206 ~~~s~~~----~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~ 281 (537)
.+.+.++ +.++++++|||+||||..|+||+||.+|++.+|+.++++.+... +..++||+||+|.+|+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~g~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~vlvEe~I~G~~E~~v~ 228 (377)
T 1ehi_A 155 VVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQY------DYKVLIEEAVNGARELEVG 228 (377)
T ss_dssp EECTTGGGGCCHHHHHHHHCSCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTTT------CSCEEEEECCCCSCEEEEE
T ss_pred EEeccccchHHHHHHHHhcCCCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHhc------CCcEEEEcCCCCCceEEEE
Confidence 5666544 66677889999999999999999999999999999999876432 4689999999998899999
Q ss_pred EEEeCCCcEEEEeeeecc-------cccccc------eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEe
Q 009323 282 VLADKYGNVVHFGERDCS-------IQRRNQ------KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLD 348 (537)
Q Consensus 282 v~~d~~g~v~~~~~r~~~-------~~~~~~------~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~ 348 (537)
++.++++.++..++..+. +.+... ......|+. ++++..+++.+++.++++++|+.|++++||+++
T Consensus 229 vl~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~ 307 (377)
T 1ehi_A 229 VIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQ-LSPEVTKEVKQMALDAYKVLNLRGEARMDFLLD 307 (377)
T ss_dssp EEESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC
T ss_pred EEcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEe
Confidence 998866566666555431 111111 234456876 999999999999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCCcc----ccchhhcCCCH---HHHHHHHHcC
Q 009323 349 ERGSFYFMEMNTRIQVEH----PVTEMISSVDL---IEEQIHVAMG 387 (537)
Q Consensus 349 ~~g~~~~lEiNpR~~g~~----~~~~~~~Gidl---~~~~i~~a~G 387 (537)
++|++||+|||||++++. +....++|+|+ +..++..+++
T Consensus 308 ~~g~~~vlEiN~rpg~t~~s~~p~~~~a~G~~~~~l~~~li~~al~ 353 (377)
T 1ehi_A 308 ENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFE 353 (377)
T ss_dssp TTCCEEEEEEESSCCCSTTCGGGTGGGGGTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 888999999999998652 33445799999 4455666654
No 42
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=100.00 E-value=1.8e-35 Score=307.92 Aligned_cols=306 Identities=18% Similarity=0.209 Sum_probs=226.5
Q ss_pred cCCCCCcEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhhhcc-----------------CEEEE
Q 009323 66 KVTCRQEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA-----------------DESVC 119 (537)
Q Consensus 66 ~~~~~~~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~a-----------------d~~~~ 119 (537)
...|+.+||.|+-+|. +|..+++++++.||+++.++.+.+......... ...+.
T Consensus 17 ~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (386)
T 3e5n_A 17 QGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLHADDPARIALHRSGRGVA 96 (386)
T ss_dssp ----CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECGGGSEESTTCTTTCEECCCCCCEE
T ss_pred hhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECCCCCEEecccchhhcccccccccccccccccee
Confidence 3444456777666544 267899999999999999976544211100000 00111
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCC
Q 009323 120 IGEAPSSQSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 120 i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gip 198 (537)
+.+......+.... ......++|+|+|. +|...|+..++.+++.+|++++|+++.++..+.||..+|++|+++|||
T Consensus 97 ~~~~~~~~~~~~~~---~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp 173 (386)
T 3e5n_A 97 LLPGAQQQQLRPIQ---PEQALAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLA 173 (386)
T ss_dssp ECTTCSSSCEEECC-----CCCCCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCC
T ss_pred eccCccccceeccc---cccccCCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCC
Confidence 11111100110000 00123579999999 899899989999999999999999999999999999999999999999
Q ss_pred CCCCcCccCCCHH----HHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCC
Q 009323 199 TVPGSDGLLQSTE----EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN 274 (537)
Q Consensus 199 vp~~~~~~~~s~~----~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g 274 (537)
+|++ ..+.+.+ ++.++++++|||+||||..|++|+|+++|++.+|+.++++.+... +..++||+||+|
T Consensus 174 ~p~~--~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~G 245 (386)
T 3e5n_A 174 VAPF--VCFDRHTAAHADVDTLIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALAY------DHKVLVEAAVAG 245 (386)
T ss_dssp BCCE--EEEEHHHHTTCCHHHHHHHHCSSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTTT------CSEEEEEECCCS
T ss_pred CCCE--EEEeCcccchhhHHHHHHhcCCCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHhC------CCcEEEEcCCCC
Confidence 9998 6677766 677888899999999999999999999999999999999876432 478999999999
Q ss_pred CcEEEEEEEEeCCCcEEEEeeeecc--cccccce------eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Q 009323 275 PRHIEFQVLADKYGNVVHFGERDCS--IQRRNQK------LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFL 346 (537)
Q Consensus 275 ~~e~~v~v~~d~~g~v~~~~~r~~~--~~~~~~~------~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~ 346 (537)
+|++|.++.++...++..++..+. +.....+ .....|+. ++++..+++.+.+.++++++|+.|++++||+
T Consensus 246 -~E~~v~vl~~~~~~~~~~gei~~~~~~~d~~~ky~~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~ 323 (386)
T 3e5n_A 246 -REIECAVLGNAVPHASVCGEVVVHDAFYSYATKYISEHGAEIVIPAD-IDAQTQQRIQQIAVQAYQALGCAGMARVDVF 323 (386)
T ss_dssp -EEEEEEEECSSSCEEEEEEEECC-----------------CEESSCS-SCHHHHHHHHHHHHHHHHHHTCCSEEEEEEE
T ss_pred -eEEEEEEEeCCCceEEEeEEEEeCCcccchhcccCCCCCeEEEECCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEE
Confidence 999999998866566655554432 1222222 23346776 8999999999999999999999999999999
Q ss_pred EeCCCCEEEEEEecCCCCc----cccchhhcCCCHHHHHHHH
Q 009323 347 LDERGSFYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 347 ~~~~g~~~~lEiNpR~~g~----~~~~~~~~Gidl~~~~i~~ 384 (537)
++++|++||+|||||++.+ .|.....+|+|+.++..++
T Consensus 324 ~~~dg~~~vlEiN~~PG~t~~S~~p~~~~~~Gi~~~~li~~l 365 (386)
T 3e5n_A 324 LCADGRIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRL 365 (386)
T ss_dssp ECTTCCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred EECCCcEEEEEeECCCCCCccCHHHHHHHHhCCCHHHHHHHH
Confidence 9988999999999999754 2334457899987765444
No 43
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=100.00 E-value=1.6e-34 Score=299.06 Aligned_cols=301 Identities=17% Similarity=0.204 Sum_probs=225.8
Q ss_pred CcEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhhhccC-----------------EEEEcCCCC
Q 009323 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-----------------ESVCIGEAP 124 (537)
Q Consensus 71 ~~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad-----------------~~~~i~~~~ 124 (537)
++||.|+-+|. +|..+++++++.||+++.++.+.+.........+ ..+.+.+..
T Consensus 3 ~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (364)
T 3i12_A 3 KLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKAGQWHVNDAENYLQNADDPAHIALRPSAISLAQVPGK 82 (364)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECSSSSBSSTTCTTTCCBCCCSCBEEECTTC
T ss_pred ccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEECCCCCEEecccchhhhccccccccccccccccceecccc
Confidence 45666665543 3678999999999999999765442111000000 001111100
Q ss_pred CCCCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCc
Q 009323 125 SSQSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGS 203 (537)
Q Consensus 125 ~~~~~~~~~~i~~~a~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~ 203 (537)
........ .......++|+|+|. +|...|+..++.+++.+|++++|++..++..+.||..+|++|+++|||+|++
T Consensus 83 ~~~~~~~~---~~~~~~~~~D~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~- 158 (364)
T 3i12_A 83 HQHQLINA---QNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPF- 158 (364)
T ss_dssp SSSCEEET---TTCCBCCCCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCE-
T ss_pred cccceecc---ccccccCCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCE-
Confidence 00000000 000013579999999 7999999999999999999999999999999999999999999999999998
Q ss_pred CccCCCHH----HHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEE
Q 009323 204 DGLLQSTE----EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIE 279 (537)
Q Consensus 204 ~~~~~s~~----~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~ 279 (537)
..+.+.+ ++.++++++|||+||||..|++|.|++++++.+|+.++++.+... +..++||+||+| +|++
T Consensus 159 -~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~G-~E~~ 230 (364)
T 3i12_A 159 -ITLTRTNRHAFSFAEVESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEF------DHKVVVEQGIKG-REIE 230 (364)
T ss_dssp -EEEETTTGGGCCHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEE
T ss_pred -EEEEccccchhhHHHHHHhcCCCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHhc------CCcEEEEcCcCC-eEEE
Confidence 5666665 777888899999999999999999999999999999999887654 478999999999 9999
Q ss_pred EEEEEeCCCcEEEEeeeec--cccccc------ceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCC
Q 009323 280 FQVLADKYGNVVHFGERDC--SIQRRN------QKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERG 351 (537)
Q Consensus 280 v~v~~d~~g~v~~~~~r~~--~~~~~~------~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g 351 (537)
+.++.++...+...++... .+.... .......|+. ++++..+++.+.+.++++++|+.|++++||+++++|
T Consensus 231 v~vl~~~~~~~~~~~ei~~~~~~~~~~~ky~~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g 309 (364)
T 3i12_A 231 CAVLGNDNPQASTCGEIVLNSEFYAYDTKYIDDNGAQVVVPAQ-IPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTADN 309 (364)
T ss_dssp EEEEESSSCEEEEEEEEECCTTCC--TTTTSGGGGCEEESSCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTC
T ss_pred EEEEeCCCceEeeeEEEecCCCccCHHHcccCCCceEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEecCC
Confidence 9999886644555544211 111111 1145567887 999999999999999999999999999999999889
Q ss_pred CEEEEEEecCCCCc----cccchhhcCCCHHHHHHHH
Q 009323 352 SFYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 352 ~~~~lEiNpR~~g~----~~~~~~~~Gidl~~~~i~~ 384 (537)
++||+|||+|++.+ .+.....+|+|+.+...++
T Consensus 310 ~~~vlEiN~~Pg~t~~s~~p~~~~a~G~~~~~l~~~l 346 (364)
T 3i12_A 310 EVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRL 346 (364)
T ss_dssp CEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred CEEEEEeeCCCCCCCCCHHHHHHHHhCcCHHHHHHHH
Confidence 99999999999754 2444556899988865544
No 44
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=100.00 E-value=1.2e-34 Score=300.91 Aligned_cols=310 Identities=18% Similarity=0.235 Sum_probs=213.7
Q ss_pred CCCCCCcCCCC--CcEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhh-hccCEEE---EcCCCC
Q 009323 60 GGGGALKVTCR--QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESV---CIGEAP 124 (537)
Q Consensus 60 ~~~~~~~~~~~--~~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~ad~~~---~i~~~~ 124 (537)
-+|+..|++-. .+||+|+-+|. +|..+++++++.||+++.++.+.+...... ...+... .+....
T Consensus 24 ~~~~~~~~~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~ 103 (383)
T 3k3p_A 24 MTGGQQMGRGSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQPSETDKLMTND 103 (383)
T ss_dssp -------------CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEEEEESSCCC--CCCCCTT
T ss_pred cccchhcccccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEecCCCCEEecccccccccccccccccc
Confidence 34555555543 34677776554 478899999999999999976543211100 0000000 000000
Q ss_pred CCC--CCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCC-CCCC
Q 009323 125 SSQ--SYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAG-VPTV 200 (537)
Q Consensus 125 ~~~--~~~~~~~i~~~a~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~G-ipvp 200 (537)
... ...+...+ . .++|+|+|. .|...|+..++.+++.+|++++|++..++..+.||..+|++|+++| ||+|
T Consensus 104 ~~~~~~~~~~~~~---~--~~~D~vf~~lhG~~GEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp 178 (383)
T 3k3p_A 104 TIIASQKIKPSDI---Y--EEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQV 178 (383)
T ss_dssp SCCGGGEECGGGG---C--CTTCEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBC
T ss_pred ccccccccccccc---c--cCCCEEEEcCCCCCcchHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCC
Confidence 000 00000001 0 369999998 4666699899999999999999999999999999999999999999 9999
Q ss_pred CCcCccCCCH----HHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCc
Q 009323 201 PGSDGLLQST----EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPR 276 (537)
Q Consensus 201 ~~~~~~~~s~----~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~ 276 (537)
++ ..+.+. +++.++.+++|||+||||..|++|.|+++|++.+|+.++++.+... +..++||+||+| +
T Consensus 179 ~~--~~~~~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~~------~~~vlVEe~I~G-~ 249 (383)
T 3k3p_A 179 AY--VALIEGEPLESKLAEVEEKLIYPVFVKPANMGSSVGISKAENRTDLKQAIALALKY------DSRVLIEQGVDA-R 249 (383)
T ss_dssp CE--EEEETTSCHHHHHHHHHHHCCSSEEEEECC------CEEESSHHHHHHHHHHHHHH------CSEEEEEECCCS-E
T ss_pred CE--EEEeCccchhHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhC------CCeEEEEcCCCC-e
Confidence 98 445443 5677788899999999999999999999999999999999887654 478999999999 9
Q ss_pred EEEEEEEEeCCCcEEEEeeee--cccccccc-----eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC
Q 009323 277 HIEFQVLADKYGNVVHFGERD--CSIQRRNQ-----KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE 349 (537)
Q Consensus 277 e~~v~v~~d~~g~v~~~~~r~--~~~~~~~~-----~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~ 349 (537)
|+++.++.|+...+....+.. ..+..... .....+|+. ++++..+++.+.+.++++++|+.|++++||++++
T Consensus 250 E~~v~vl~d~~~~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~ 328 (383)
T 3k3p_A 250 EIEVGILGNTDVKTTLPGEIVKDVAFYDYEAKYIDNKITMAIPAE-IDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTE 328 (383)
T ss_dssp EEEEEEEESSSCEECCCEEEC-----------------CEESSCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT
T ss_pred EEEEEEEeCCCeeEEeeEEEecCCCccchhhcccCCCeeEEecCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEEC
Confidence 999999987543333333321 11222222 234567887 9999999999999999999999999999999998
Q ss_pred CCCEEEEEEecCCCCc----cccchhhcCCCHHHHHHHH
Q 009323 350 RGSFYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 350 ~g~~~~lEiNpR~~g~----~~~~~~~~Gidl~~~~i~~ 384 (537)
+|++||+|||||++.+ .+......|+|+.+...++
T Consensus 329 ~g~~~vlEINtrPG~t~~S~~p~~~~a~Gi~~~~li~~l 367 (383)
T 3k3p_A 329 DGKVYLNELNTMPGFTQWSMYPLLWENMGLSYSVLIEEL 367 (383)
T ss_dssp TCCEEEEEEESSCCCC--CHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCEEEEEeeCCCCCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 8999999999999743 3444556899987765544
No 45
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=100.00 E-value=1.1e-34 Score=300.37 Aligned_cols=299 Identities=18% Similarity=0.223 Sum_probs=220.7
Q ss_pred CcEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhhh----ccC--EEEEcCCCCCCCCCCCHHHH
Q 009323 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVK----LAD--ESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 71 ~~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~----~ad--~~~~i~~~~~~~~~~~~~~i 135 (537)
.+||+|+.+|. .+..+++++++.|++++.++.+.+....... .++ ..+.+. .+....+ ..+
T Consensus 3 ~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~ 78 (364)
T 2i87_A 3 KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTDELHLE-NGEALEI---SQL 78 (364)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEECTTCCEEEECCCCSCCCSGGGSCGG-GSEEECS---SGG
T ss_pred CcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEcCCCCEEeccccccccccchhhccc-ccccccc---ccc
Confidence 46788887663 4688999999999999999766543211000 000 001010 0000001 011
Q ss_pred HHH-HHHcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHH--
Q 009323 136 LSA-AISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE-- 211 (537)
Q Consensus 136 ~~~-a~~~~~d~V~p~~-g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~-- 211 (537)
+.. .+..++|+|+|.. |...|+..++.+++.+|++++|++++++..+.||..++++|+++|||+|++ ..+.+.+
T Consensus 79 ~~~~~~~~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~~ 156 (364)
T 2i87_A 79 LKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPY--ISFLRSEYE 156 (364)
T ss_dssp GGBCTTSSBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCE--EEEEHHHHH
T ss_pred ccccccccCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEechhhc
Confidence 110 0245799999985 777788788899999999999999999999999999999999999999998 5566554
Q ss_pred -----HHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeC
Q 009323 212 -----EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADK 286 (537)
Q Consensus 212 -----~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~ 286 (537)
++.++++++|||+||||..|++|+||.+|++.+|+..+++.+... +..++||+||+| +|+++.++.++
T Consensus 157 ~~~~~~~~~~~~~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~~------~~~~lvEe~I~G-~E~~v~vl~~~ 229 (364)
T 2i87_A 157 KYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQF------DRKLVIEQGVNA-REIEVAVLGND 229 (364)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHTT------CSEEEEEECCCC-EEEEEEEEESS
T ss_pred ccchhHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhc------CCeEEEEeCccC-eEEEEEEEcCC
Confidence 466777889999999999999999999999999999999876532 478999999999 99999999886
Q ss_pred CCcEEEEeeeec--cccccccee-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEe
Q 009323 287 YGNVVHFGERDC--SIQRRNQKL-----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMN 359 (537)
Q Consensus 287 ~g~v~~~~~r~~--~~~~~~~~~-----~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiN 359 (537)
.+.++..++... .+.....+. ....|+. ++++..+++.+++.++++++|+.|++++||+++++|++||+|||
T Consensus 230 ~~~~~~~~e~~~~~~~~~~~~k~~~g~~~~~~pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~viEiN 308 (364)
T 2i87_A 230 YPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPAD-LDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETN 308 (364)
T ss_dssp SCEECCCEEECCSCCC-----------CCEESSCS-SCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEE
T ss_pred CcEEeeeEEEecCCCcCCHHHcccCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEecCCCEEEEEEe
Confidence 544443333321 111211111 2346776 89999999999999999999999999999999988999999999
Q ss_pred cCCCCcc----ccchhhcCCCHHHHHHH
Q 009323 360 TRIQVEH----PVTEMISSVDLIEEQIH 383 (537)
Q Consensus 360 pR~~g~~----~~~~~~~Gidl~~~~i~ 383 (537)
||++++. +....++|+|+.++..+
T Consensus 309 ~rpg~t~~s~~p~~~~~~G~~~~~l~~~ 336 (364)
T 2i87_A 309 AMPGFTAFSMYPKLWENMGLSYPELITK 336 (364)
T ss_dssp SSCCCSTTSHHHHHHHHTTCCHHHHHHH
T ss_pred CCCCCCchhHHHHHHHHhCCCHHHHHHH
Confidence 9998752 33345689998665443
No 46
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=100.00 E-value=7.1e-34 Score=286.71 Aligned_cols=274 Identities=20% Similarity=0.280 Sum_probs=216.5
Q ss_pred CCcEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009323 70 RQEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 70 ~~~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~ 140 (537)
|.+||+|+++|. .+..++++++++|+++++++.+ +. .... +.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~-~~--~~~~--------------------------~~ 51 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK-EV--DVTQ--------------------------LK 51 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT-TS--CGGG--------------------------TT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC-ch--HHHH--------------------------hh
Confidence 457899999887 6789999999999999999644 11 1100 01
Q ss_pred HcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHH----
Q 009323 141 SRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK---- 215 (537)
Q Consensus 141 ~~~~d~V~p~~-g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~---- 215 (537)
...+|+|++.. +...|+..++..++.+|++++||+++++..+.||..++++|+++|||+|++ ..+.+. ++.+
T Consensus 52 ~~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gi~~p~~--~~~~~~-~~~~~~~~ 128 (306)
T 1iow_A 52 SMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPW--VALTRA-EFEKGLSD 128 (306)
T ss_dssp TTTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCE--EEEEHH-HHHHCCCT
T ss_pred ccCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCe--EEEchh-hhhccchh
Confidence 24678888763 333366667788999999999999999999999999999999999999998 556666 6666
Q ss_pred ----HHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEE
Q 009323 216 ----LADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVV 291 (537)
Q Consensus 216 ----~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~ 291 (537)
++++++||+||||..|+||+|++++++.+|+.++++.+... +..+++|+||+| +|+++.++ + |+++
T Consensus 129 ~~~~~~~~~~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~g-~e~~v~~~-~--g~~~ 198 (306)
T 1iow_A 129 KQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQH------DEEVLIEKWLSG-PEFTVAIL-G--EEIL 198 (306)
T ss_dssp HHHHHHHTTCSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTTT------CSEEEEEECCCC-CEEEEEEE-T--TEEC
T ss_pred hhhhHHhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh------CCCEEEEeCcCC-EEEEEEEE-C--CCcc
Confidence 77889999999999999999999999999999998876421 478999999998 99999998 3 3443
Q ss_pred EEeeeec-----ccccc--cceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCC
Q 009323 292 HFGERDC-----SIQRR--NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV 364 (537)
Q Consensus 292 ~~~~r~~-----~~~~~--~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g 364 (537)
...+... .+... ........|+. ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||||+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~~iEiN~rpg~ 277 (306)
T 1iow_A 199 PSIRIQPSGTFYDYEAKFLSDETQYFCPAG-LEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGM 277 (306)
T ss_dssp CCEEEECSSSSSCHHHHHTCSCCEEESSCC-CCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTSCEEEEEEESSCCC
T ss_pred ceEEEEeCCCeEchhheecCCCeeEEcCCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEcCCCCEEEEEecCCCCC
Confidence 3332211 11000 11234567775 8999999999999999999999999999999998899999999999977
Q ss_pred cc----ccchhhcCCCHHHHHHHHHc
Q 009323 365 EH----PVTEMISSVDLIEEQIHVAM 386 (537)
Q Consensus 365 ~~----~~~~~~~Gidl~~~~i~~a~ 386 (537)
.. +.....+|+|+.+.++++..
T Consensus 278 ~~~s~~p~~~~~~G~~~~~~~~~~~~ 303 (306)
T 1iow_A 278 TSHSLVPMAARQAGMSFSQLVVRILE 303 (306)
T ss_dssp STTCHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHcCCCHHHHHHHHHH
Confidence 53 23456789999999988753
No 47
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=100.00 E-value=3e-33 Score=289.48 Aligned_cols=300 Identities=16% Similarity=0.192 Sum_probs=214.7
Q ss_pred cEEEEEcCcHH---------HHHHHHHHHHcCCCEEEEecCCCCCChhh-------------h-cc--CEEEEcCCCCCC
Q 009323 72 EKILVANRGEI---------AVRVIRTAHEMGIPCVAVYSTIDKDALHV-------------K-LA--DESVCIGEAPSS 126 (537)
Q Consensus 72 ~kvLi~g~g~~---------a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-------------~-~a--d~~~~i~~~~~~ 126 (537)
+||.|+-+|.+ |..+++++++.||+++.++.+.+...... . .. +..+.+.+....
T Consensus 5 ~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 84 (372)
T 3tqt_A 5 LHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISVIFIDHVGRWYLIDQPEMFLAHSPDHLVKEGSARPITIAFGDAA 84 (372)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECCHHHHHHSCHHHHHHHTCSEEEEECTTCSS
T ss_pred CEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEEEEEECCCCCEEeccchhhhhccccccccccccccceeecccccc
Confidence 46776665543 78899999999999999976544211100 0 00 111112100000
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCc
Q 009323 127 QSYLLIPNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDG 205 (537)
Q Consensus 127 ~~~~~~~~i~~~a~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~ 205 (537)
....... ......++|+|+|. +|...|+..++.+++.+|++++|+++.++..+.||..+|++|+++|||+|++ .
T Consensus 85 ~~~~~~~---~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~--~ 159 (372)
T 3tqt_A 85 KPWQSLN---GDGRRYSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDW--H 159 (372)
T ss_dssp CCEEEC-------CEECCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCC--E
T ss_pred cceeecc---ccccccCCCEEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCE--E
Confidence 0000000 00001469999998 5777799899999999999999999999999999999999999999999998 4
Q ss_pred cCCCHHH----HHHHHHHhCCc-EEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEE
Q 009323 206 LLQSTEE----AVKLADELGFP-VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEF 280 (537)
Q Consensus 206 ~~~s~~~----~~~~~~~ig~P-vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v 280 (537)
.+.+.++ +.++.+++||| +||||..|++|.||.+|++.+|+.++++.+... +..++||+||+| +|++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~lg~P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~~------~~~vlVEe~I~G-~E~~v 232 (372)
T 3tqt_A 160 TLSPRDATEGVYQRLLDRWGTSELFVKAVSLGSSVATLPVKTETEFTKAVKEVFRY------DDRLMVEPRIRG-REIEC 232 (372)
T ss_dssp EECTTSCCTTHHHHHHHHC---CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTTT------CSCEEEEECCCS-EEEEE
T ss_pred EEechhhhhhHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhc------CCCEEEECCCCC-EEEEE
Confidence 5555442 55677889999 999999999999999999999999999876432 478999999999 99999
Q ss_pred EEEEeCCCcEEEEeeee-----ccccccc--ce-eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCC
Q 009323 281 QVLADKYGNVVHFGERD-----CSIQRRN--QK-LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGS 352 (537)
Q Consensus 281 ~v~~d~~g~v~~~~~r~-----~~~~~~~--~~-~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~ 352 (537)
.++.++...+...++.. +.+...+ .. .....|+. ++++..+++.+++.++++++|+.|++++||+++++|+
T Consensus 233 ~vl~~~~~~~~~~~ei~~~~~~~d~~~ky~~g~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~~dg~ 311 (372)
T 3tqt_A 233 AVLGNGAPKASLPGEIIPHHDYYSYDAKYLDPNGATTTTSVD-LSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTPNNK 311 (372)
T ss_dssp EEEESSSCEECCCEEEECC---------------CEEESCCC-CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCC
T ss_pred EEEeCCCceEeeeEEEecCCCccchhhcccCCCceEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEeCCCc
Confidence 99987532222222211 1111111 11 44567886 9999999999999999999999999999999998899
Q ss_pred EEEEEEecCCCCc----cccchhhcCCCHHHHHHHH
Q 009323 353 FYFMEMNTRIQVE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 353 ~~~lEiNpR~~g~----~~~~~~~~Gidl~~~~i~~ 384 (537)
+||+|||||++-+ .|....++|+|+.+...++
T Consensus 312 ~~vlEINt~PG~t~~S~~p~~~~~~G~~~~~li~~l 347 (372)
T 3tqt_A 312 VLVNEINTIPGFTNISMYPKMWEASGLPCPNLLDQL 347 (372)
T ss_dssp EEEEEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEEEECCCCcCccCHHHHHHHHhCCCHHHHHHHH
Confidence 9999999999744 3445567899987765444
No 48
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=100.00 E-value=2.5e-33 Score=283.31 Aligned_cols=271 Identities=20% Similarity=0.262 Sum_probs=207.4
Q ss_pred cEEEEEcCc---------HHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009323 72 EKILVANRG---------EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 72 ~kvLi~g~g---------~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~ 142 (537)
+||+|+.+| ..+..+++++++.|++++.++.+... . + +.+..
T Consensus 4 m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~-~--------------------------~--~~~~~ 54 (307)
T 3r5x_A 4 MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKM-D--------------------------L--IEKAK 54 (307)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGG-G--------------------------H--HHHTT
T ss_pred cEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCch-h--------------------------H--HHhcc
Confidence 578888766 34788999999999999998542110 0 0 11225
Q ss_pred CCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHH-HHHHh
Q 009323 143 GCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK-LADEL 220 (537)
Q Consensus 143 ~~d~V~p~~-g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~-~~~~i 220 (537)
++|+|++.. |...|+..++..++.+|++++||+++++..+.||..++++|+++|||+|++ ..+.+.+++.. +++++
T Consensus 55 ~~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~--~~~~~~~~~~~~~~~~~ 132 (307)
T 3r5x_A 55 DIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDW--IELTKMEDLNFDELDKL 132 (307)
T ss_dssp TCSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEESSSCCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEeChhhhhHHHHHhc
Confidence 799999984 333467778889999999999999999999999999999999999999998 55666555543 67889
Q ss_pred CCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEeeeeccc
Q 009323 221 GFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFGERDCSI 300 (537)
Q Consensus 221 g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~~r~~~~ 300 (537)
+||+||||..|+||+|++++++.+|+.++++.+... +..+++|+||+| +|+++.++ + |+++.+.......
T Consensus 133 ~~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~G-~e~~v~v~-~--g~~~~~~~~~~~~ 202 (307)
T 3r5x_A 133 GFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEW------DSEVVIEKYIKG-EEITCSIF-D--GKQLPIISIRHAA 202 (307)
T ss_dssp CSSEEEEECC----CCCEEECSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEE-T--TEECCCEEEEEEE
T ss_pred CCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEECCcCC-EEEEEEEE-C--CEEeeEEEEEcCC
Confidence 999999999999999999999999999999887654 479999999999 99999986 2 3443332221111
Q ss_pred c--ccccee----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCc----cccch
Q 009323 301 Q--RRNQKL----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVE----HPVTE 370 (537)
Q Consensus 301 ~--~~~~~~----~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~----~~~~~ 370 (537)
. ....+. ....|.. ++++..+++.+++.++++++|+.|++++||+++ +|++||+|||||++.. .+...
T Consensus 203 ~~~~~~~~~~~~g~~~~p~~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~-~g~~~vlEiN~rpg~~~~s~~~~~~ 280 (307)
T 3r5x_A 203 EFFDYNAKYDDASTIEEVIE-LPAELKERVNKASLACYKALKCSVYARVDMMVK-DGIPYVMEVNTLPGMTQASLLPKSA 280 (307)
T ss_dssp EEETTEEEEEEEEEEEEECC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEE-TTEEEEEEEESSCCCSTTSHHHHHH
T ss_pred cccChhhcCCCCCCeEecCC-CCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEE-CCeEEEEEEcCCCCCCccCHHHHHH
Confidence 1 222222 2233665 899999999999999999999999999999999 5779999999999754 23445
Q ss_pred hhcCCCHHHHHHHHH
Q 009323 371 MISSVDLIEEQIHVA 385 (537)
Q Consensus 371 ~~~Gidl~~~~i~~a 385 (537)
..+|+|+.+...++.
T Consensus 281 ~~~G~~~~~li~~ll 295 (307)
T 3r5x_A 281 DAAGIHYSKLLDMII 295 (307)
T ss_dssp HHTTCCHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHH
Confidence 678999987665553
No 49
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=100.00 E-value=1.6e-33 Score=289.46 Aligned_cols=297 Identities=18% Similarity=0.206 Sum_probs=219.7
Q ss_pred CcEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhh-----hcc--C-EEEEcCCCCCCCCCCCHH
Q 009323 71 QEKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KLA--D-ESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 71 ~~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-----~~a--d-~~~~i~~~~~~~~~~~~~ 133 (537)
.+||+|+.+|. ++..+++++++.||+++.++.+.+...... .+. + ..+.+.+.+....
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 77 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCYSAVLSPDKKMHG----- 77 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCCCTTCCCTTCEEEEECSCTTTCE-----
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcCCCCEEecccchhhcccccccceeccccccccc-----
Confidence 46788887664 478899999999999999976554321100 111 0 1122222111000
Q ss_pred HH-HHH--HHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCC
Q 009323 134 NV-LSA--AISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQS 209 (537)
Q Consensus 134 ~i-~~~--a~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s 209 (537)
.+ ... .+..++|+|+|. .|...|+..++.+++.+|++++|++++++..+.||..++++|+++|||+|++ ..+.+
T Consensus 78 ~~~~~~~~~~~~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~ 155 (343)
T 1e4e_A 78 LLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAF--WVINK 155 (343)
T ss_dssp EEEEETTEEEEEECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCE--EEECT
T ss_pred ceeecccccccccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCE--EEEec
Confidence 01 000 123569999998 4555678778899999999999999999999999999999999999999998 55665
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCc
Q 009323 210 TEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGN 289 (537)
Q Consensus 210 ~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~ 289 (537)
.+++.. ++++||+||||..|++|+|+.+|++.+|+.++++.+... +..++||+||+| +|+++.++.++.+
T Consensus 156 ~~~~~~--~~~~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~~lvEe~I~G-~E~~v~vl~~~~~- 225 (343)
T 1e4e_A 156 DDRPVA--ATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQY------DSKILIEQAVSG-CEVGCAVLGNSAA- 225 (343)
T ss_dssp TCCCCG--GGSCSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTTT------CSSEEEEECCCS-EEEEEEEEEETTC-
T ss_pred hhhhhh--hccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCcEEEEeCcCC-eEEEEEEEeCCCC-
Confidence 544321 578999999999999999999999999999998876432 478999999999 9999999988654
Q ss_pred EEEE--eeeec--ccccc---------cceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEE
Q 009323 290 VVHF--GERDC--SIQRR---------NQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFM 356 (537)
Q Consensus 290 v~~~--~~r~~--~~~~~---------~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~l 356 (537)
+..+ .+... .+... ........|+. ++++..+++.+++.++++++|+.|++++||+++++|++||+
T Consensus 226 ~~~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~g~~~vi 304 (343)
T 1e4e_A 226 LVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPAD-LSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVLN 304 (343)
T ss_dssp CEECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSCS-SCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTCCEEEE
T ss_pred eEEeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEeCCCCEEEE
Confidence 3222 22211 01111 11233456776 89999999999999999999999999999999988999999
Q ss_pred EEecCCCCcc----ccchhhcCCCHHHHHHHHH
Q 009323 357 EMNTRIQVEH----PVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 357 EiNpR~~g~~----~~~~~~~Gidl~~~~i~~a 385 (537)
|||+|++++. +....++|+|+.+...++.
T Consensus 305 EiN~rpg~t~~s~~p~~~~~~G~~~~~l~~~li 337 (343)
T 1e4e_A 305 EVNTLPGFTSYSRYPRMMAAAGISLPELIDRLI 337 (343)
T ss_dssp EEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred EeeCCCCCCcccHHHHHHHHhCCCHHHHHHHHH
Confidence 9999998752 3344567999988876653
No 50
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-33 Score=292.53 Aligned_cols=233 Identities=21% Similarity=0.316 Sum_probs=190.5
Q ss_pred CCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHH--HHHHHHH
Q 009323 143 GCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEE--AVKLADE 219 (537)
Q Consensus 143 ~~d~V~p~~-g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~--~~~~~~~ 219 (537)
++|+|+|.. |...|+..++.+++.+|++++|++..++..+.||..+|++|+++|||+|++ ..+.+.++ ..+..++
T Consensus 109 ~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~k~~l~~~GIp~p~~--~~~~~~~~~~~~~~~~~ 186 (373)
T 3lwb_A 109 SVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAY--AVLRPPRSTLHRQECER 186 (373)
T ss_dssp TCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHHHHHHHHTTCCBCCE--EEECTTCCCCCHHHHHH
T ss_pred CccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHHHHHHHHcCcCCCCE--EEEECcccchhHHHHHh
Confidence 699999995 888899999999999999999999999999999999999999999999998 45555443 1334678
Q ss_pred hCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCC--cEEEEeeee
Q 009323 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYG--NVVHFGERD 297 (537)
Q Consensus 220 ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g--~v~~~~~r~ 297 (537)
+|||+||||..|++|.||++|++.+|+.++++.+... +..++||+||+| +|+++.++.++.+ .+...++..
T Consensus 187 lg~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~~------~~~vlVEe~I~G-~E~~v~vl~~~~~~~~~~~~~ei~ 259 (373)
T 3lwb_A 187 LGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRH------DPKVIVEAAISG-RELECGVLEMPDGTLEASTLGEIR 259 (373)
T ss_dssp HCSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHTT------CSSEEEEECCEE-EEEEEEEEECTTSCEEECCCEEEE
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEeCCCCC-eEEEEEEEECCCCceEEeeeeEEE
Confidence 9999999999999999999999999999999887643 478999999999 9999999998766 333333333
Q ss_pred cc--------cccccc-----eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCC
Q 009323 298 CS--------IQRRNQ-----KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV 364 (537)
Q Consensus 298 ~~--------~~~~~~-----~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g 364 (537)
+. +.+... ......|+. +++++.+++.+.+.++++++|+.|++++||+++++|+ ||+|||||++.
T Consensus 260 ~~~~~~~~~~~~d~~~ky~~~~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~dg~-~vlEIN~~PG~ 337 (373)
T 3lwb_A 260 VAGVRGREDSFYDFATKYLDDAAELDVPAK-VDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTDDGP-VINEINTMPGF 337 (373)
T ss_dssp CCSTTCSEESSSCHHHHHTCTTCEEESSCC-CCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEETTEE-EEEEEESSCCC
T ss_pred ccCCCCccccccchhhcccCCCceEEeCCC-CCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEECCCC-EEEEecCCCCC
Confidence 22 222111 123456886 9999999999999999999999999999999998897 99999999975
Q ss_pred c----cccchhhcCCCHHHH---HHHHHc
Q 009323 365 E----HPVTEMISSVDLIEE---QIHVAM 386 (537)
Q Consensus 365 ~----~~~~~~~~Gidl~~~---~i~~a~ 386 (537)
+ .+....++|+|+.+. ++..++
T Consensus 338 t~~S~~p~~~~a~Gi~~~~li~~li~~a~ 366 (373)
T 3lwb_A 338 TTISMYPRMWAASGVDYPTLLATMIETTL 366 (373)
T ss_dssp STTSHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 4 233445799997654 455554
No 51
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=100.00 E-value=2.5e-33 Score=288.31 Aligned_cols=298 Identities=18% Similarity=0.187 Sum_probs=215.8
Q ss_pred cEEEEEcCcH---------HHHHHHHHHHHcCCCEEEEecCCCCCChhh-----hccC-E--EEEcCCCCCCCCCCCHHH
Q 009323 72 EKILVANRGE---------IAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KLAD-E--SVCIGEAPSSQSYLLIPN 134 (537)
Q Consensus 72 ~kvLi~g~g~---------~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-----~~ad-~--~~~i~~~~~~~~~~~~~~ 134 (537)
+||.|+-+|. +|..+++++++.||+++.++.+.+...... .+.. . .-.+.+............
T Consensus 4 ~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (346)
T 3se7_A 4 MKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSPDRSVHGLLVLEQ 83 (346)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCSSSSSSSSCCEEEEECCCTTTCEEEEEET
T ss_pred CEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEECCCCCEEeccchhhhhcccccccceeccCccCccceeccc
Confidence 4666665444 478899999999999999976544211000 0000 0 000100000000000000
Q ss_pred HHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHH
Q 009323 135 VLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA 213 (537)
Q Consensus 135 i~~~a~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~ 213 (537)
...++.++|+|+|. +|...|+..++.+++.+|++++|+++.++..+.||..++++|+++|||+|++ ..+.+.+
T Consensus 84 --~~~~~~~~D~v~~~lhG~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~-- 157 (346)
T 3se7_A 84 --GKYETIRLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNF--WTVTADE-- 157 (346)
T ss_dssp --TEEEEEECSEEEECCCSTTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCE--EEEETTS--
T ss_pred --ccccccCCCEEEEccCCCCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCE--EEEcCcH--
Confidence 00123579999999 4888899899999999999999999999999999999999999999999998 4555443
Q ss_pred HHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEE
Q 009323 214 VKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHF 293 (537)
Q Consensus 214 ~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~ 293 (537)
..+.++++||+||||..|++|.|++++++.+|+.++++.+... +..++||+||+| +|+++.++.++.+ ...+
T Consensus 158 ~~~~~~lg~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~~------~~~vlvEe~I~G-~E~~v~vl~~~~~-~~~~ 229 (346)
T 3se7_A 158 KIPTDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREY------DSKVLIEEAVIG-TEIGCAVMGNGPE-LITG 229 (346)
T ss_dssp CCCTTTCCSSEEEEESSCCTTTTCEEECSHHHHHHHHHHHTTT------CSEEEEEECCCS-EEEEEEEEEETTE-EEEC
T ss_pred HHHHHhcCCCEEEEeCCCCCCcCEEEECCHHHHHHHHHHHHhC------CCcEEEEeCcCC-EEEEEEEEecCCC-eEEE
Confidence 3345678999999999999999999999999999999876432 478999999999 9999999998543 2222
Q ss_pred --eeeecc--cccc----cc-----eeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEec
Q 009323 294 --GERDCS--IQRR----NQ-----KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNT 360 (537)
Q Consensus 294 --~~r~~~--~~~~----~~-----~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNp 360 (537)
.+.... +... .. ......|+. ++++..+++.+.+.++++++|+.|++++||+++++|++||+|||+
T Consensus 230 ~~~e~~~~~~~~d~~q~~~~ky~~~~~~~~~pa~-l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~ 308 (346)
T 3se7_A 230 EVDQITLSHGFFKIHQESTPESGSDNSAVTVPAD-ISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTEDGKVVLNEVNT 308 (346)
T ss_dssp CCEEECCC--------------CGGGSCEESSCC-CCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTTSCEEEEEEES
T ss_pred eeEEEecCCCCcCcccchhccccCCCeeEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEeCCCCEEEEEEeC
Confidence 222111 0000 11 123456776 999999999999999999999999999999999889999999999
Q ss_pred CCCCc----cccchhhcCCCHHHHHHHH
Q 009323 361 RIQVE----HPVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 361 R~~g~----~~~~~~~~Gidl~~~~i~~ 384 (537)
|++.+ .+....++|+|+.+...++
T Consensus 309 rPG~t~~s~~p~~~~~~G~~~~~l~~~l 336 (346)
T 3se7_A 309 FPGMTSYSRYPRMMTAAGLSRADVIDRL 336 (346)
T ss_dssp SCCCSTTCHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 99754 2334457999998866554
No 52
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=100.00 E-value=9.6e-33 Score=281.06 Aligned_cols=289 Identities=21% Similarity=0.270 Sum_probs=214.2
Q ss_pred CCcEEEEEcCcHH---------HHHHHHHHHHcCCCEEEEecCCCCCChh-----hhccCEEEEcCCCCCCCCCCCHHHH
Q 009323 70 RQEKILVANRGEI---------AVRVIRTAHEMGIPCVAVYSTIDKDALH-----VKLADESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 70 ~~~kvLi~g~g~~---------a~~ii~aa~~~G~~vv~v~~~~d~~~~~-----~~~ad~~~~i~~~~~~~~~~~~~~i 135 (537)
|.+||+|+.+|.. +..+++++++ +++.++-+.+..... ..+++....+...+. ... +
T Consensus 2 ~~~~v~vl~gg~s~E~~vSl~s~~~v~~al~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~ 72 (322)
T 2fb9_A 2 EFMRVLLIAGGVSPEHEVSLLSAEGVLRHIPF---PTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPF---PPP---L 72 (322)
T ss_dssp CCCCEEEEEECSSTTHHHHHHHHHHHHHHCSS---CEEEEEECTTSCEECHHHHHHHTTSSCCCCCCBCS---SCC---C
T ss_pred CCcEEEEEeCCCchhHHHHHHHHHHHHHHhcc---CeEEEEEcCCCCEEecccchhhhccccccceeccc---ccc---c
Confidence 4457888875543 5778888877 777776444322110 122221100100000 000 1
Q ss_pred HHHHHHcCCCEEEeCC-CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHH
Q 009323 136 LSAAISRGCTMLHPGY-GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAV 214 (537)
Q Consensus 136 ~~~a~~~~~d~V~p~~-g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~ 214 (537)
+..++|+|+|.. |...|+..++.+++.+|++++|++.+++..+.||..++++|+++|||+|++ ..+.+.++
T Consensus 73 ----~~~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~--~~~~~~~~-- 144 (322)
T 2fb9_A 73 ----SWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPW--VAVRKGEP-- 144 (322)
T ss_dssp ----CCTTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCE--EEEETTSC--
T ss_pred ----cccCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCE--EEEECchh--
Confidence 146799999985 777888888899999999999999999999999999999999999999998 44544433
Q ss_pred HHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEEEEe
Q 009323 215 KLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVVHFG 294 (537)
Q Consensus 215 ~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~~~~ 294 (537)
+.. ++|||+||||..|++|+|+.++++.+|+.++++.+... +..++||+||+|.+|+++.++.++.+.++..+
T Consensus 145 ~~~-~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~~------~~~vlvEe~I~G~~E~~v~vl~~~~~~~~~~~ 217 (322)
T 2fb9_A 145 PVV-PFDPPFFVKPANTGSSVGISRVERFQDLEAALALAFRY------DEKAVVEKALSPVRELEVGVLGNVFGEASPVG 217 (322)
T ss_dssp CCC-CSCSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTTT------CSEEEEEECCSSCEEEEEEEESSSSCEEEEEE
T ss_pred hhh-ccCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhc------CCeEEEEeCCCCCeeEEEEEEeCCCceEeeeE
Confidence 122 68999999999999999999999999999999876432 47899999999988999999987655555555
Q ss_pred eeec--ccccccce-----eEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCcc-
Q 009323 295 ERDC--SIQRRNQK-----LLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEH- 366 (537)
Q Consensus 295 ~r~~--~~~~~~~~-----~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~- 366 (537)
+... .+.+...+ .....|+. ++++..+++.+.+.++++++|+.|++++||+++ +|++||+|||+|++++.
T Consensus 218 ei~~~~~~~~~~~k~~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~-~g~~~vlEiN~rpg~t~~ 295 (322)
T 2fb9_A 218 EVRYEAPFYDYETKYTPGRAELLIPAP-LDPGTQETVQELALKAYKVLGVRGMARVDFFLA-EGELYLNELNTIPGFTPT 295 (322)
T ss_dssp EEEEECCEEETTTEEECCEEEEESSCC-CCTTHHHHHHHHHHHHHHHHTCCSEEEEEEEEE-TTEEEEEEEESSCCCSSS
T ss_pred EEeeCCCccCHHHcccCCCeEEEeCCC-CCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEE-CCcEEEEEEECCCCCCcc
Confidence 4431 12222222 23357876 899999999999999999999999999999999 88899999999998752
Q ss_pred ---ccchhhcCCCHHHHHHHH
Q 009323 367 ---PVTEMISSVDLIEEQIHV 384 (537)
Q Consensus 367 ---~~~~~~~Gidl~~~~i~~ 384 (537)
+....++|+|+.+...++
T Consensus 296 s~~p~~~~~~G~~~~~l~~~l 316 (322)
T 2fb9_A 296 SMYPRLFEAGGVAYPELLRRL 316 (322)
T ss_dssp CHHHHHHHHTTCCHHHHHHHH
T ss_pred cHHHHHHHHhCCCHHHHHHHH
Confidence 223456899988776654
No 53
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=99.97 E-value=2.2e-31 Score=275.33 Aligned_cols=231 Identities=16% Similarity=0.168 Sum_probs=182.8
Q ss_pred CCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHH--HHHHHHHH
Q 009323 143 GCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE--EAVKLADE 219 (537)
Q Consensus 143 ~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~--~~~~~~~~ 219 (537)
++|+|+|. .|...|+..++.+++.+|++++|++.+++..+.||..++++|+++|||+|++ ..+.+.+ ++.+ +++
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~--~~~~~~~~~~~~~-~~~ 183 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDY--VLLNEKNRANALD-LMN 183 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCC--EEECTTTGGGHHH-HCC
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCE--EEEeCCchHHHHH-Hhc
Confidence 69999998 5666788888999999999999999999999999999999999999999998 5566655 5655 678
Q ss_pred hCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEE-EEEEEeCCCcEEEEee-ee
Q 009323 220 LGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIE-FQVLADKYGNVVHFGE-RD 297 (537)
Q Consensus 220 ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~-v~v~~d~~g~v~~~~~-r~ 297 (537)
+|||+||||..|++|.|+.++++.+|+.++++.+... +..++||+||+|.+|++ +.+.. +|+++.... ..
T Consensus 184 lg~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~~------~~~vlVEe~I~G~~E~svi~v~v--~g~~~~~~~ei~ 255 (367)
T 2pvp_A 184 FNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEY------SKEVLIEPFIQGVKEYNLAGCKI--KKDFCFSYIEEP 255 (367)
T ss_dssp SCSCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTTT------CSCEEEEECCTTCEEEEEEEEEE--TTEEEEEEEEET
T ss_pred cCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhc------CCcEEEEeCCCCCceeeEEEEEE--CCEEEEEEEEEe
Confidence 9999999999999999999999999999999876432 47899999999978966 44444 455443332 11
Q ss_pred c--cccccccee-----EEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccch
Q 009323 298 C--SIQRRNQKL-----LEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTE 370 (537)
Q Consensus 298 ~--~~~~~~~~~-----~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~ 370 (537)
. .+.....+. ...+|+. ++++..+++.+++.++++++|+.|++++||+++ +|++||+|||||++++.. .
T Consensus 256 ~~~~~~d~~~ky~~g~~~~~~Pa~-l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~-~g~~~vlEiN~rpg~t~~--s 331 (367)
T 2pvp_A 256 NKQEFLDFKQKYLDFSRNKAPKAS-LSNALEEQLKENFKKLYSDLFDGAIIRCDFFVI-ENEVYLNEINPIPGSLAN--Y 331 (367)
T ss_dssp TTTEEECCCCSSCCSCCCSCCCCC-CCHHHHHHHHHHHHHHHTTTSTTCCEEEEEEEE-TTEEEEEEEESSCGGGGG--G
T ss_pred cCCceEcccccccCCCeeEEecCC-CCHHHHHHHHHHHHHHHHHcCCCCEEEEEEEEE-CCeEEEEEEeCCCCCCcc--c
Confidence 0 011111111 1245775 899999999999999999999999999999999 788999999999965421 1
Q ss_pred hhcCCCHHHHHHHHHcCCCC
Q 009323 371 MISSVDLIEEQIHVAMGGKL 390 (537)
Q Consensus 371 ~~~Gidl~~~~i~~a~G~~l 390 (537)
... |+.++..++..+..+
T Consensus 332 ~~p--~~~~l~~~li~~~~~ 349 (367)
T 2pvp_A 332 LFD--DFKTTLENLAQSLPK 349 (367)
T ss_dssp GSS--SHHHHHHHHHHHCC-
T ss_pred ccC--CHHHHHHHHHhCccc
Confidence 111 888888888877654
No 54
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.97 E-value=1e-30 Score=259.97 Aligned_cols=272 Identities=21% Similarity=0.313 Sum_probs=199.3
Q ss_pred EEEEcC--cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC-EEEeC
Q 009323 74 ILVANR--GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT-MLHPG 150 (537)
Q Consensus 74 vLi~g~--g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d-~V~p~ 150 (537)
|+|++. +..+..++++++++|+++++++.+.+. ..+++. + .....+| ++++.
T Consensus 2 I~il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~~----~~~~~~------------~---------~~~~~~d~~~~~~ 56 (280)
T 1uc8_A 2 LAILYDRIRPDERMLFERAEALGLPYKKVYVPALP----MVLGER------------P---------KELEGVTVALERC 56 (280)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCC----EETTBC------------C---------GGGTTCCEEEECC
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCcEEEEehhhce----eeccCC------------C---------cccCCCCEEEECC
Confidence 778874 667899999999999999999754432 112211 1 1124689 88887
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecC
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATA 230 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~ 230 (537)
++. .++..++..++..|+++++ +++++..+.||..++++|+++|+|+|++ ..+.+.+++.+++++++||+|+||..
T Consensus 57 ~~~-~~~~~~~~~l~~~g~~~~~-~~~~~~~~~dK~~~~~~l~~~gi~~p~~--~~~~~~~~~~~~~~~~~~p~vvKp~~ 132 (280)
T 1uc8_A 57 VSQ-SRGLAAARYLTALGIPVVN-RPEVIEACGDKWATSVALAKAGLPQPKT--ALATDREEALRLMEAFGYPVVLKPVI 132 (280)
T ss_dssp SSH-HHHHHHHHHHHHTTCCEES-CHHHHHHHHBHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSEEEECSB
T ss_pred ccc-hhhHHHHHHHHHCCCceeC-CHHHHHHhCCHHHHHHHHHHcCcCCCCe--EeeCCHHHHHHHHHHhCCCEEEEECC
Confidence 653 2566788889999999884 6999999999999999999999999998 67889999999999999999999999
Q ss_pred CCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCC-CcEEEEEEEEeCCCcEEEEeeeecc-cccccceeE
Q 009323 231 GGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-PRHIEFQVLADKYGNVVHFGERDCS-IQRRNQKLL 308 (537)
Q Consensus 231 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g-~~e~~v~v~~d~~g~v~~~~~r~~~-~~~~~~~~~ 308 (537)
|+||+|++++++.+|+.++++.+.. ...+.+..+++|+||+| ..|+++.++ .|+++....+... +........
T Consensus 133 g~~~~gv~~v~~~~el~~~~~~~~~--~~~~~~~~~lvqe~i~~~~~e~~v~v~---~~~~~~~~~~~~~~~~~~~~~g~ 207 (280)
T 1uc8_A 133 GSWGRLLAXXXXXXXXXXXXXXKEV--LGGFQHQLFYIQEYVEKPGRDIRVFVV---GERAIAAIYRRSAHWITNTARGG 207 (280)
T ss_dssp CCBCSHHHHHHHHHC--------------CTTTTCEEEEECCCCSSCCEEEEEE---TTEEEEEEEC-------------
T ss_pred CCCcccceecccccccchhhhhHhh--hcccCCCcEEEEeccCCCCceEEEEEE---CCEEEEEEEEecCCccccccCCc
Confidence 9999999999999999988876521 11112478999999997 577777776 2355443332110 100000111
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCC
Q 009323 309 EEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGG 388 (537)
Q Consensus 309 ~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~ 388 (537)
...|.. +++ ++.+.+.++++++|+ |.+++||+++++| +||+|||||+++.. ++..+|+|+.+.+++.++|.
T Consensus 208 ~~~p~~-l~~----~~~~~~~~~~~~lg~-g~~~vD~~~~~~g-~~~iEiN~r~g~~~--~~~~~G~~~~~~~~~~~~~~ 278 (280)
T 1uc8_A 208 QAENCP-LTE----EVARLSVKAAEAVGG-GVVAVDLFESERG-LLVNEVNHTMEFKN--SVHTTGVDIPGEILKYAWSL 278 (280)
T ss_dssp -CEECC-CCH----HHHHHHHHHHHHTTC-SEEEEEEEEETTE-EEEEEEETTCCCTT--HHHHHCCCHHHHHHHHHHHT
T ss_pred cccCCC-CCH----HHHHHHHHHHHHhCC-CeEEEEEEEeCCC-eEEEEEeCCCCccc--hheeeccCHHHHHHHHHHhh
Confidence 123443 444 788999999999999 9999999999888 99999999996554 57889999999999998875
No 55
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.97 E-value=5.8e-29 Score=253.84 Aligned_cols=264 Identities=18% Similarity=0.214 Sum_probs=185.5
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCC-ChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~-~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
.+||+|+|+| .+..++++++++|+++++++.+.+.. .....++|+.+.++ .+.+ +. +++ .+|+|+|
T Consensus 2 ~m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d-~~---l~~--~~d~i~~ 68 (334)
T 2r85_A 2 KVRIATYASH-SALQILKGAKDEGFETIAFGSSKVKPLYTKYFPVADYFIEE------KYPE-EE---LLN--LNAVVVP 68 (334)
T ss_dssp CSEEEEESST-THHHHHHHHHHTTCCEEEESCGGGHHHHHTTSCCCSEEECS------SCCH-HH---HHH--TTEEECC
T ss_pred ceEEEEECCh-hHHHHHHHHHhCCCEEEEEECCCCCcccccccccCceEecC------CcCh-HH---hcc--cCCEEEE
Confidence 4589999999 99999999999999999996443211 11345677776542 1322 22 232 3588887
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEec
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKAT 229 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~ 229 (537)
..++. .......++..|++++ |+++++..+.||..++++|+++|||+|++ +.+.++ ++||+||||.
T Consensus 69 ~~e~~--~~~~~~~le~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gip~p~~----~~~~~~-------l~~P~vvKP~ 134 (334)
T 2r85_A 69 TGSFV--AHLGIELVENMKVPYF-GNKRVLRWESDRNLERKWLKKAGIRVPEV----YEDPDD-------IEKPVIVKPH 134 (334)
T ss_dssp CTTHH--HHHCHHHHHTCCSCBB-SCTTHHHHHHSHHHHHHHHHHTTCCCCCB----CSCGGG-------CCSCEEEEEC
T ss_pred Ccchh--hhhHHHHHHHcCCCcc-CCHHHHHHHHhHHHHHHHHHHcCCCCCCc----cCChHH-------cCCCEEEEeC
Confidence 64321 1122345578999976 56799999999999999999999999986 345443 5799999999
Q ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhc-CCCcEEEEeccCCCcEEEEEEEEeCCCc-EEEEe--eeecc----cc
Q 009323 230 AGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAF-GNDGVYLEKYVQNPRHIEFQVLADKYGN-VVHFG--ERDCS----IQ 301 (537)
Q Consensus 230 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~-~~~~~lvEe~I~g~~e~~v~v~~d~~g~-v~~~~--~r~~~----~~ 301 (537)
.|+||+||+++++.+|+..+++.+.... .+ ....+++|+||+| .++++.++.+..+. +-.+. .+... +.
T Consensus 135 ~g~~s~Gv~~v~~~~el~~~~~~~~~~~--~~~~~~~~lvee~i~G-~e~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~ 211 (334)
T 2r85_A 135 GAKGGKGYFLAKDPEDFWRKAEKFLGIK--RKEDLKNIQIQEYVLG-VPVYPHYFYSKVREELELMSIDRRYESNVDAIG 211 (334)
T ss_dssp C----TTCEEESSHHHHHHHHHHHHCCC--SGGGCCSEEEEECCCC-EEEEEEEEEETTTTEEEEEEEEEEEEEEGGGGG
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHhhc--ccCCCCcEEEEeccCC-ceeEEEEeecCcCceeeeeeeccEEEeccCccc
Confidence 9999999999999999999887764320 01 1368999999999 88887666553222 21111 11000 00
Q ss_pred c-----c--c--ceeEEEc---CCCCCCHHHHHHHHHHHHHHHHHc-----CCcceeEEEEEEeCCCCEEEEEEecCCCC
Q 009323 302 R-----R--N--QKLLEEA---PSPALTPELRKAMGDAAVAAAASI-----GYIGVGTVEFLLDERGSFYFMEMNTRIQV 364 (537)
Q Consensus 302 ~-----~--~--~~~~~~~---p~~~l~~~~~~~i~~~a~~i~~al-----g~~G~~~vEf~~~~~g~~~~lEiNpR~~g 364 (537)
+ . . ....... |+. ++++..+++.+++.++++++ ++.|++|+||+++++|++||+|||||+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~p~~-l~~~~~~~i~~~a~~~~~~l~~~~~~~~G~~~vd~~~~~~g~~~viEiN~R~g~ 290 (334)
T 2r85_A 212 RIPAKDQLEFDMDITYTVIGNIPIV-LRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFTPDLEFVVFEISARIVA 290 (334)
T ss_dssp GSCHHHHTTSCCCCCEEEEEEEECC-CCGGGHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEECTTSCEEEEEEECSCCG
T ss_pred ccccccccccccCCceeeeCCCCcc-cCHHHHHHHHHHHHHHHHHHHhhcccccccEEEEEEECCCCCEEEEEEeCCcCC
Confidence 0 0 0 0011122 665 88888899999999999999 88899999999998888999999999998
Q ss_pred c
Q 009323 365 E 365 (537)
Q Consensus 365 ~ 365 (537)
+
T Consensus 291 ~ 291 (334)
T 2r85_A 291 G 291 (334)
T ss_dssp G
T ss_pred C
Confidence 5
No 56
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=99.97 E-value=1e-28 Score=253.51 Aligned_cols=267 Identities=17% Similarity=0.204 Sum_probs=192.9
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCCh---hhhccCEEEEcCCCCCCCCCCCH--HHHHHHHHHcCCCE
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL---HVKLADESVCIGEAPSSQSYLLI--PNVLSAAISRGCTM 146 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~---~~~~ad~~~~i~~~~~~~~~~~~--~~i~~~a~~~~~d~ 146 (537)
.+|+++|+| .+..++++|+++|++|++++.+.+ .+ ..+++|+.+.++ .|.|. +++++.+++.+ +.
T Consensus 19 ~~I~ilGs~-l~~~l~~aAk~lG~~vi~vd~~~~--~p~~~~~~~ad~~~~~d------~~~d~~~~~~l~~l~~~~-~v 88 (361)
T 2r7k_A 19 ITIATLGSH-TSLHILKGAKLEGFSTVCITMKGR--DVPYKRFKVADKFIYVD------NFSDIKNEEIQEKLRELN-SI 88 (361)
T ss_dssp CEEEEESST-THHHHHHHHHHTTCCEEEEECTTS--CHHHHHTTCCSEEEECS------SGGGGGSHHHHHHHHHTT-EE
T ss_pred CEEEEECcH-HHHHHHHHHHHCCCEEEEEECCCC--CCcccccccCceEEECC------CcccccHHHHHHHHHHcC-CE
Confidence 579999999 999999999999999999976544 33 667899988763 35452 45555555554 66
Q ss_pred EEeCCCcccccH---HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCc
Q 009323 147 LHPGYGFLAENA---VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFP 223 (537)
Q Consensus 147 V~p~~g~~se~~---~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~P 223 (537)
|.|-. +.. .+..+.++.|++++| +..++....||...|++|+++|||+|++ +.+.+++ +||
T Consensus 89 V~pe~----~~v~~~gl~~l~~~~g~~v~g-~~~a~~~e~~k~~~k~~l~~~GIptp~~----~~~~~e~-------~~P 152 (361)
T 2r7k_A 89 VVPHG----SFIAYCGLDNVENSFLVPMFG-NRRILRWESERSLEGKLLREAGLRVPKK----YESPEDI-------DGT 152 (361)
T ss_dssp ECCBH----HHHHHHCHHHHHHTCCSCBBS-CGGGGGTTTCHHHHHHHHHHTTCCCCCE----ESSGGGC-------CSC
T ss_pred EEeCc----hhhhHHHHHHHHHHcCCCcCC-CHHHHHHhhhHHHHHHHHHHcCcCCCCE----eCCHHHc-------CCC
Confidence 55421 222 122334489999886 8899999999999999999999999975 3455443 699
Q ss_pred EEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcC---CCcEEEEeccCCCcEEEEEEEEeC-CCcE--EEEeeee
Q 009323 224 VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFG---NDGVYLEKYVQNPRHIEFQVLADK-YGNV--VHFGERD 297 (537)
Q Consensus 224 vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~---~~~~lvEe~I~g~~e~~v~v~~d~-~g~v--~~~~~r~ 297 (537)
+||||..+++|+|++++++.+|+.++++.+.... .|+ +.+++|||||+| .++++..+..- .+++ +.+..|.
T Consensus 153 vVVK~~~~a~GkGv~v~~s~ee~~~a~~~~~~~~--~~~~~~~~~viIEEfl~G-~e~s~~~f~~~~~~~~e~~~id~r~ 229 (361)
T 2r7k_A 153 VIVKFPGARGGRGYFIASSTEEFYKKAEDLKKRG--ILTDEDIANAHIEEYVVG-TNFCIHYFYSPLKDEVELLGMDKRY 229 (361)
T ss_dssp EEEECSCCCC---EEEESSHHHHHHHHHHHHHTT--SCCHHHHHHCEEEECCCS-EEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred EEEeeCCCCCCCCEEEECCHHHHHHHHHHHHhcc--ccccCCCCeEEEEeccce-EEeeEEEEecccCCeeEEEEecceE
Confidence 9999999999999999999999999998775321 111 147999999999 77775555432 2222 2222221
Q ss_pred cc-------c----------ccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc------CCcceeEEEEEEeCCCCEE
Q 009323 298 CS-------I----------QRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI------GYIGVGTVEFLLDERGSFY 354 (537)
Q Consensus 298 ~~-------~----------~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~al------g~~G~~~vEf~~~~~g~~~ 354 (537)
.. + ........+ .|+. +++.+.+++.+++.++++++ ++.|++++||+++++|++|
T Consensus 230 ~~~~dgi~~~~~~~~~~~~~~p~~v~~G~-~Pa~-l~~~~~~~a~~~a~~v~~al~~~~~~~~~G~~~vE~fvt~dg~i~ 307 (361)
T 2r7k_A 230 ESNIDGLVRIPAKDQLEMNINPSYVITGN-IPVV-IRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNENLELV 307 (361)
T ss_dssp EEEHHHHTTSCHHHHHTCCCCCCEEEEEE-EECC-CCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECTTSCEE
T ss_pred EeecccceecchhhhhcccCCCceEEecC-cCCc-CCHHHHHHHHHHHHHHHHHHHhhccCCccceEEEEEEEcCCCCEE
Confidence 00 0 000111111 2876 88999999999999999999 8889999999999888899
Q ss_pred EEEEecCCCCccccc
Q 009323 355 FMEMNTRIQVEHPVT 369 (537)
Q Consensus 355 ~lEiNpR~~g~~~~~ 369 (537)
|+|||||++|+..+.
T Consensus 308 V~EIapR~gGg~~~~ 322 (361)
T 2r7k_A 308 VFEMSARVDGGTNSF 322 (361)
T ss_dssp EEEEESSBCGGGGGG
T ss_pred EEEEcCCCCCCcccc
Confidence 999999999884444
No 57
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=99.95 E-value=3.4e-28 Score=245.02 Aligned_cols=251 Identities=14% Similarity=0.171 Sum_probs=172.3
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCCh---hhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL---HVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~---~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..+|.++|+| .++.++++|+++|++|++++... +.+ ..++||+.+.++ .|.| ++ ...|.|
T Consensus 2 ~~~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~~--~~p~~~a~~~ad~~~~~~------~~~d------l~--~~~dvi 64 (320)
T 2pbz_A 2 SLIVSTIASH-SSLQILLGAKKEGFKTRLYVSPK--RRPFYSSLPIVDDLVVAE------EMTS------IL--NDDGIV 64 (320)
T ss_dssp --CEEEESST-THHHHHHHHHHTTCCEEEEECTT--THHHHHTCTTCSEEEECS------CSCC------TT--CCSSBC
T ss_pred ceEEEEEcCH-hHHHHHHHHHHCCCEEEEEECCC--CCccchhhhcCCeEEECC------cHHH------HH--hcCCEE
Confidence 3469999999 99999999999999999996543 334 678899999763 2444 22 345887
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEE
Q 009323 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIK 227 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvK 227 (537)
.|-.++. .......+++.|++++ |+.+++....||...+++|+++|||+|+++ . .+++ +++||||||
T Consensus 65 tpe~e~v--~~~~l~~le~~~~p~~-p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~--~---~ee~-----~i~~PviVK 131 (320)
T 2pbz_A 65 VPHGSFV--AYLGIEAIEKAKARFF-GNRRFLKWETTFELQDKALEGAGIPRVEVV--E---PEDA-----KPDELYFVR 131 (320)
T ss_dssp CCBTTHH--HHSCHHHHHTCCSCCB-SCSSGGGGGSCHHHHHHHHHHHTCCBCCBC--C---SCCC-----CSSCCEEEE
T ss_pred Eecccch--hHHHHHHHHHcCCCcC-CCHHHHHHHHhHHHHHHHHHHCCcCCCCee--C---HhHc-----CcCCcEEEE
Confidence 7644321 1112234578899977 688999999999999999999999999984 1 2222 489999999
Q ss_pred ecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEe-CCCcEEEEeeeecccccccc-
Q 009323 228 ATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLAD-KYGNVVHFGERDCSIQRRNQ- 305 (537)
Q Consensus 228 p~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d-~~g~v~~~~~r~~~~~~~~~- 305 (537)
|..|+||+|++++++ +|+..+++.+ . .+++|||||+| .++++.++.+ -.|++..++.++.-......
T Consensus 132 p~~g~ggkG~~~v~~-eel~~~~~~~--------~-~~~IiEEfI~g-~~~~~~~f~~~~~g~~e~~~~~~r~e~~~g~~ 200 (320)
T 2pbz_A 132 IEGPRGGSGHFIVEG-SELEERLSTL--------E-EPYRVERFIPG-VYLYVHFFYSPILERLELLGVDERVLIADGNA 200 (320)
T ss_dssp CC------------C-EECSCCCC-------------CCEEEECCCS-CEEEEEEEEETTTTEEEEEEEEEEEETTCSSS
T ss_pred ECCCCCCCCEEEECh-HHHHHHHHhc--------C-CCEEEEeeece-EecceeEEeccccCceeEEEecceEEEECCee
Confidence 999999999999999 9998766543 1 47999999999 5556555554 34555544433211001111
Q ss_pred ---------eeEEEcCCCCCCHHHHHHHHHHHHHHHHHc------CCcceeEEEEEEeCCCCEEEEEEecCCCCc
Q 009323 306 ---------KLLEEAPSPALTPELRKAMGDAAVAAAASI------GYIGVGTVEFLLDERGSFYFMEMNTRIQVE 365 (537)
Q Consensus 306 ---------~~~~~~p~~~l~~~~~~~i~~~a~~i~~al------g~~G~~~vEf~~~~~g~~~~lEiNpR~~g~ 365 (537)
-.....|+. +++.+.+++.+++.++++++ |+.|++++| ++++|++||+|||||++|+
T Consensus 201 ~~p~~~~~~~~~G~~P~~-~~~~~~~~a~~~a~~i~~~L~~l~~~g~~G~~~vE--~~~dg~~~v~EIapR~~GG 272 (320)
T 2pbz_A 201 RWPVKPLPYTIVGNRAIA-LRESLLPQLYDYGLAFVRTMRELEPPGVIGPFALH--FAYDGSFKAIGIASRIDGG 272 (320)
T ss_dssp SSCCSCCCCCEEEEEECE-ECGGGHHHHHHHHHHHHHHHHHHSTTCCCSEEEEE--EECSSSCEEEEEESSBCSG
T ss_pred ecccCCCceeeecCCCCc-cCHHHHHHHHHHHHHHHHHHHhhccCCceeeEEEE--EcCCCcEEEEEecCCCCCC
Confidence 111112665 78888899999999999999 999999999 5777789999999999887
No 58
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.94 E-value=8.2e-26 Score=227.95 Aligned_cols=209 Identities=14% Similarity=0.153 Sum_probs=162.4
Q ss_pred HHHHHHHHHcCCCEEEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHH
Q 009323 133 PNVLSAAISRGCTMLHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTE 211 (537)
Q Consensus 133 ~~i~~~a~~~~~d~V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~ 211 (537)
+.+.++++ .+|.+++. +|.......+.+.++..| +++|++++++..++||..+++++++ |||+|++. .
T Consensus 61 ~~l~~~~~--~~D~~~~i~~~ed~~l~~~~~~l~~~g-~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~--~----- 129 (305)
T 3df7_A 61 DSMEKYLE--KSDAFLIIAPEDDFLLYTLTKKAEKYC-ENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTS--L----- 129 (305)
T ss_dssp GGHHHHHT--TCSEEEEECCCGGGHHHHHHHHHHTTS-EESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEE--S-----
T ss_pred HHHHHHHH--hcCEEEEEccCCcHHHHHHHHHHHhcC-CccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEe--c-----
Confidence 46666664 57877764 332112245556666667 6899999999999999999999999 99999983 2
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcEE
Q 009323 212 EAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNVV 291 (537)
Q Consensus 212 ~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v~ 291 (537)
++++||+|+||..|+||+|++++++ .+..+++|+||+| +|+++.++.+ . .+.
T Consensus 130 ------~~~~~P~vvKP~~g~gs~Gv~~v~~-------------------~~~~~lvEe~I~G-~e~sv~v~~g-~-~~~ 181 (305)
T 3df7_A 130 ------RPLDCKFIIKPRTACAGEGIGFSDE-------------------VPDGHIAQEFIEG-INLSVSLAVG-E-DVK 181 (305)
T ss_dssp ------SCCSSSEEEEESSCC----CBCCSS-------------------CCTTEEEEECCCS-EEEEEEEEES-S-SEE
T ss_pred ------ccCCCCEEEEeCCCCCCCCEEEEec-------------------CCCCEEEEeccCC-cEEEEEEEeC-C-eEE
Confidence 2579999999999999999999998 1478999999999 9999999974 2 454
Q ss_pred EEeeeecccccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCEEEEEEecCCCCccccch
Q 009323 292 HFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTE 370 (537)
Q Consensus 292 ~~~~r~~~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~al-g~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~ 370 (537)
.+..... ............|+. ++++..+++.+++.++++++ |+.|++++||+++ |++||+|||||++++....+
T Consensus 182 ~~~~~~~-~~~~~~~~g~~~p~~-l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD~~~~--~~~~viEiNpR~~~~~~~~~ 257 (305)
T 3df7_A 182 CLSVNEQ-IINNFRYAGAVVPAR-ISDEVKREVVEEAVRAVECVEGLNGYVGVDIVYS--DQPYVIEINARLTTPVVAFS 257 (305)
T ss_dssp EEEEEEE-EEETTEEEEEEESCC-CCHHHHHHHHHHHHHHHTTSTTCCEEEEEEEEES--SSEEEEEEESSCCGGGGGHH
T ss_pred EEEEeeE-eccCceeccccccCC-CCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEC--CCEEEEEEcCCCCCCHHHHH
Confidence 4443211 111122334456775 89999999999999999999 9999999999996 56999999999999877778
Q ss_pred hhcCCCHHHHHHHH
Q 009323 371 MISSVDLIEEQIHV 384 (537)
Q Consensus 371 ~~~Gidl~~~~i~~ 384 (537)
.++|+|+.++++++
T Consensus 258 ~~~G~~~~~~~~~~ 271 (305)
T 3df7_A 258 RAYGASVADLLAGG 271 (305)
T ss_dssp HHHSCCHHHHHTTC
T ss_pred HHHCCCHHHHHHhc
Confidence 89999999999988
No 59
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.90 E-value=3.9e-23 Score=208.61 Aligned_cols=287 Identities=12% Similarity=0.039 Sum_probs=185.0
Q ss_pred cEEEEEcCc--------HHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCE-EEEcCCCCCCCCCCC--HHHHHHHHH
Q 009323 72 EKILVANRG--------EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADE-SVCIGEAPSSQSYLL--IPNVLSAAI 140 (537)
Q Consensus 72 ~kvLi~g~g--------~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~-~~~i~~~~~~~~~~~--~~~i~~~a~ 140 (537)
+||+|+..+ ..+..++++++++|+++++++.+..........++. .+.+.. ..+.+.. .+.+..
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 76 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQ--NYEEWFSFVGEQDLP--- 76 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGEEEETTEEEEEEEEEEECS--CSSCCEEEEEEEEEE---
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhHeEEECCeEEEEEeeeEecc--CcccceeccCccccc---
Confidence 478888766 357889999999999999996432111110111211 111211 0011111 000011
Q ss_pred HcCCCEEEeCCCccc--cc---HHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHH
Q 009323 141 SRGCTMLHPGYGFLA--EN---AVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVK 215 (537)
Q Consensus 141 ~~~~d~V~p~~g~~s--e~---~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~ 215 (537)
..++|+|++..+... |. ..+.+.++..|++++ ++++++..+.||..++++++ |+|++ ..+.+.+++.+
T Consensus 77 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~----~~P~t--~~~~~~~~~~~ 149 (316)
T 1gsa_A 77 LADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIV-NKPQSLRDCNEKLFTAWFSD----LTPET--LVTRNKAQLKA 149 (316)
T ss_dssp GGGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEE-SCHHHHHHCCTTGGGGGGTT----TSCCE--EEESCHHHHHH
T ss_pred cccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEe-cCHHHHHhhhhHHHHHhhhh----cCCCe--EEeCCHHHHHH
Confidence 135899998753211 11 245566778999876 68999999999999999887 99998 67889999999
Q ss_pred HHHHhCCcEEEEecCCCCCccEEEeC-CHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCC--CcEEEEEEEEeCCCcEEE
Q 009323 216 LADELGFPVMIKATAGGGGRGMRLAK-EPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN--PRHIEFQVLADKYGNVVH 292 (537)
Q Consensus 216 ~~~~ig~PvvvKp~~g~gg~Gv~~v~-~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g--~~e~~v~v~~d~~g~v~~ 292 (537)
+++++| |+|+||..|++|+||++++ +.+++..+++.+.. .+...+++|+||+| ..++++.++ +|+++.
T Consensus 150 ~~~~~~-p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~~-----~~~~~~lvqe~i~~~~~~~~~v~~~---~g~~~~ 220 (316)
T 1gsa_A 150 FWEKHS-DIILKPLDGMGGASIFRVKEGDPNLGVIAETLTE-----HGTRYCMAQNYLPAIKDGDKRVLVV---DGEPVP 220 (316)
T ss_dssp HHHHHS-SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHTT-----TTTSCEEEEECCGGGGGCEEEEEEE---TTEECS
T ss_pred HHHHcC-CEEEEECCCCCcccEEEecCChHHHHHHHHHHHh-----cCCceEEEecccCCCCCCCEEEEEE---CCEEee
Confidence 998999 9999999999999999998 88899887765421 12368999999998 355555544 345554
Q ss_pred -Eeeeec---ccccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeCCCCEEEEEEecCCCCcccc
Q 009323 293 -FGERDC---SIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPV 368 (537)
Q Consensus 293 -~~~r~~---~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~ 368 (537)
...+.. .+......-....|.. ++++.. ++...+.+.++++|+ +.+.+||+ | .||+|||+|.+++...
T Consensus 221 ~~~~r~~~~~~~~~~~~~gg~~~~~~-~~~~~~-~~a~~~~~~l~~~g~-~~~~vD~~----g-~~~iEvN~r~~~~~~~ 292 (316)
T 1gsa_A 221 YCLARIPQGGETRGNLAAGGRGEPRP-LTESDW-KIARQIGPTLKEKGL-IFVGLDII----G-DRLTEINVTSPTCIRE 292 (316)
T ss_dssp EEEEEECCSSCSCCCGGGTCEEEEEE-CCHHHH-HHHHHHHHHHHHTTC-CEEEEEEE----T-TEEEEEECSSCCCHHH
T ss_pred eEEEEeCCCCCceeEEccCCccccCC-CCHHHH-HHHHHHHHHHHhCCC-cEEEEEec----C-CEEEEEcCCCCcchHH
Confidence 222211 0111100011122333 454332 333333334445677 67789998 6 4899999997656666
Q ss_pred chhhcCCCHHHHHHHHHcC
Q 009323 369 TEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 369 ~~~~~Gidl~~~~i~~a~G 387 (537)
.+..+|+|+.+.+++...+
T Consensus 293 ~~~~~g~~~~~~~~~~~~~ 311 (316)
T 1gsa_A 293 IEAEFPVSITGMLMDAIEA 311 (316)
T ss_dssp HHHHSSCCHHHHHHHHHHH
T ss_pred HHHhhCcCHHHHHHHHHHH
Confidence 6778999999999887754
No 60
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.87 E-value=1.1e-21 Score=199.29 Aligned_cols=240 Identities=12% Similarity=0.173 Sum_probs=167.0
Q ss_pred CcEEEEEcCc-HHHHHHHHHHHHcCCCE--EEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 71 QEKILVANRG-EIAVRVIRTAHEMGIPC--VAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~kvLi~g~g-~~a~~ii~aa~~~G~~v--v~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
+++|+|+... .....++++++++|+++ +.++.+. .+. +.. ..+|+|
T Consensus 11 ~m~i~il~~~~~~s~~l~~al~~~G~~v~~~~~d~~~--------------~~~-------~~~----------~~~d~v 59 (324)
T 1z2n_X 11 TVSLFIWLPESKQKTLFISTKNHTQFELNNIIFDVTL--------------STE-------LPD----------KEPNAI 59 (324)
T ss_dssp EEEEEEECCHHHHHHHBSSCCSEEEEEETTEEEEEEE--------------ESS-------CCS----------SCCSEE
T ss_pred cEEEEEEEchhhhhhhHHHHHHhcCcEEEEEEecCCC--------------Ccc-------ccC----------CCceEE
Confidence 3578888752 22337888999999999 8885421 010 000 157888
Q ss_pred EeCCCcccccHHHHHHHH---H--CCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhC-
Q 009323 148 HPGYGFLAENAVFVEMCR---E--HGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELG- 221 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e---~--~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig- 221 (537)
++.... +...+...++ . .|++++ ++++++..+.||..++++|+++|||+|++ ..+.+.+++.+++++.+
T Consensus 60 ~~~~~~--~~~~~~~~l~~~~~~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~P~~--~~~~~~~~~~~~~~~~~~ 134 (324)
T 1z2n_X 60 ITKRTH--PVGKMADEMRKYEKDHPKVLFL-ESSAIHDMMSSREEINALLIKNNIPIPNS--FSVKSKEEVIQLLQSKQL 134 (324)
T ss_dssp EECCSC--SSSHHHHHHHHHHHHCTTSEEE-TCHHHHHHHTBHHHHHHHHHHTTCCCSCE--EEESSHHHHHHHHHTTCS
T ss_pred EEeccc--hHHHHHHHHHHHHHhCCCCeEe-CCHHHHHHHhCHHHHHHHHHHCCCCCCCE--EEeCCHHHHHHHHHHcCC
Confidence 876432 2212333333 3 788865 89999999999999999999999999998 67889999888888754
Q ss_pred -CcEEEEecCCCCC---ccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCC-CcEEEEEEEEeCCCcEEEEeee
Q 009323 222 -FPVMIKATAGGGG---RGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-PRHIEFQVLADKYGNVVHFGER 296 (537)
Q Consensus 222 -~PvvvKp~~g~gg---~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g-~~e~~v~v~~d~~g~v~~~~~r 296 (537)
||+|+||..|.|| +|+.++++.+++.. . +..+++|+||++ .+++++.++. |+++....+
T Consensus 135 ~~P~vvKP~~g~g~~~s~gv~~v~~~~~l~~------------~-~~~~lvqe~i~~~g~~~~v~v~g---~~~~~~~~~ 198 (324)
T 1z2n_X 135 ILPFIVKPENAQGTFNAHQMKIVLEQEGIDD------------I-HFPCLCQHYINHNNKIVKVFCIG---NTLKWQTRT 198 (324)
T ss_dssp CSSEEEEESBCSSSSGGGEEEEECSGGGGTT------------C-CSSEEEEECCCCTTCEEEEEEET---TEEEEEEEC
T ss_pred CCCEEEeeCCCCCCccceeeEEEeCHHHHhh------------c-CCCEEEEEccCCCCcEEEEEEEC---CEEEEEEec
Confidence 9999999999999 99999999888652 1 478999999986 3677777662 355444221
Q ss_pred ecc-cc----------c-------------------------ccceeEEEcCCCCCCHHHH-HHHHHHHHHHHHHcCCcc
Q 009323 297 DCS-IQ----------R-------------------------RNQKLLEEAPSPALTPELR-KAMGDAAVAAAASIGYIG 339 (537)
Q Consensus 297 ~~~-~~----------~-------------------------~~~~~~~~~p~~~l~~~~~-~~i~~~a~~i~~alg~~G 339 (537)
... +. . .........+. ...... +++.+.+.++++++|+.
T Consensus 199 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~a~~~~~~lg~~- 275 (324)
T 1z2n_X 199 SLPNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPI--LLNLTSEAEMRDLAYKVRCALGVQ- 275 (324)
T ss_dssp CCCCCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCSCTT--TTTSCCHHHHHHHHHHHHHHHTCS-
T ss_pred CcccccCCCccceeeccccchhhhccccccccccccccccccchhhccccCCc--cccCCCHHHHHHHHHHHHHHhCCc-
Confidence 110 00 0 00000000111 111222 68899999999999996
Q ss_pred eeEEEEEEe-CCCCEEEEEEecCCCCc
Q 009323 340 VGTVEFLLD-ERGSFYFMEMNTRIQVE 365 (537)
Q Consensus 340 ~~~vEf~~~-~~g~~~~lEiNpR~~g~ 365 (537)
.+++||+++ ++|++||+|||+|++..
T Consensus 276 ~~~vD~~~~~~~g~~~vlEvN~~Pg~~ 302 (324)
T 1z2n_X 276 LCGIDFIKENEQGNPLVVDVNVFPSYG 302 (324)
T ss_dssp EEEEEEECGGGCSSCEEEEEEESCCTT
T ss_pred EEeeEEEEEcCCCCEEEEEEcCCCCcC
Confidence 889999998 56899999999998544
No 61
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.85 E-value=1.1e-21 Score=217.74 Aligned_cols=240 Identities=21% Similarity=0.186 Sum_probs=179.3
Q ss_pred CCHHHHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHC-------CCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCC
Q 009323 130 LLIPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREH-------GINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 130 ~~~~~i~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~-------gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~ 202 (537)
.+.+.|+++|++.++|+++.+. +..+++++... |+...||+..++..++||..+|++|+++|||+|++
T Consensus 433 ~st~~Iv~~A~~~gid~~vlg~-----e~~l~~lg~~~~~~~ig~~~~t~~~s~~aa~~~~DK~~tk~lL~~~GIPvP~~ 507 (757)
T 3ln7_A 433 LSTQALLFDVIQKGIHTEILDE-----NDQFLCLKYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQS 507 (757)
T ss_dssp HHHHHHHHHHHHHTCEEEEEET-----TTTEEEEEETTEEEEEETTTBCSSSBSHHHHHHHHSHHHHHHHHHHTCCCCCE
T ss_pred CCHHHHHHHHHHhCCCEEEECC-----CHHHHHhcccccceeeccCccCCCCHHHHHHHhcCHHHHHHHHHHCCcCCCCE
Confidence 4578999999999999998543 22222222222 34445677899999999999999999999999999
Q ss_pred cCccCCCHHHHHHHH-HHhCCcEEEEecCCCCCccEEEe----CCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcE
Q 009323 203 SDGLLQSTEEAVKLA-DELGFPVMIKATAGGGGRGMRLA----KEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRH 277 (537)
Q Consensus 203 ~~~~~~s~~~~~~~~-~~ig~PvvvKp~~g~gg~Gv~~v----~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e 277 (537)
..+.+.+++.+++ +.+|||+||||..|++|+||+++ ++.+++.++++.+... +..++||+||+| +|
T Consensus 508 --~~~~~~~ea~~~~~~~~g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~~------~~~vlVEefI~G-~E 578 (757)
T 3ln7_A 508 --VEFTSLEKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFRE------DKEVMVEDYLVG-TE 578 (757)
T ss_dssp --EEESCHHHHHHGGGGSSSSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHHH------CSSEEEEECCCS-EE
T ss_pred --EEECCHHHHHHHHHHhcCCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHhc------CCcEEEEEcCCC-cE
Confidence 6789999987776 78999999999999999999999 8999999999887643 478999999999 99
Q ss_pred EEEEEEEeCCCcEEEEeeeeccc----------------c---cc---cc------------------------------
Q 009323 278 IEFQVLADKYGNVVHFGERDCSI----------------Q---RR---NQ------------------------------ 305 (537)
Q Consensus 278 ~~v~v~~d~~g~v~~~~~r~~~~----------------~---~~---~~------------------------------ 305 (537)
++|.++. |+++....|.... . ++ +.
T Consensus 579 i~v~Vlg---gkvvaai~R~p~~VvGDG~~ti~eLi~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~G 655 (757)
T 3ln7_A 579 YRFFVLG---DETLAVLLRVPANVVGDSVHSVAELVAMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKD 655 (757)
T ss_dssp EEEEEET---TEEEEEEEECCSEEEGGGCCCHHHHHHHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSS
T ss_pred EEEEEEC---CEEEEEEEEecccccCCCcccHHHHHHhhcccccccccccCccccccccHHHHHHHHHcCCCccccCCCC
Confidence 9999983 4777776654210 0 00 00
Q ss_pred -eeEE--------EcCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC--------CCCEEEEEEecCCCCc-cc
Q 009323 306 -KLLE--------EAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE--------RGSFYFMEMNTRIQVE-HP 367 (537)
Q Consensus 306 -~~~~--------~~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~--------~g~~~~lEiNpR~~g~-~~ 367 (537)
.+.- ...+...++.+.+++.+.|.++++++|+ .++.||++.++ .+.+.|||||++++-. |.
T Consensus 656 e~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa~~lGl-~~~GvDli~~di~~p~~~~~~~~~iiEvN~~P~~~~h~ 734 (757)
T 3ln7_A 656 QLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGITKAMGA-AVCGVDLIIPDLKQPATPNLTSWGVIEANFNPMMMMHI 734 (757)
T ss_dssp CEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHHHHHTC-SEEEEEEEESCSSSCCCSSTTTCEEEEEESSCCHHHHH
T ss_pred CEEEeecccccccCccceeccccCCHHHHHHHHHHHHHhCC-CEEEEEEEecCccccccccCCCeEEEEEcCCcchhhhh
Confidence 0000 0001113345566788999999999999 58889999873 2458999999999533 43
Q ss_pred cchhhcCCCHHHHHHHHHcC
Q 009323 368 VTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 368 ~~~~~~Gidl~~~~i~~a~G 387 (537)
.....+|.|+.+.+++....
T Consensus 735 ~p~~g~~~~v~~~ii~~lfp 754 (757)
T 3ln7_A 735 FPYAGKSRRLTQNVIKMLFP 754 (757)
T ss_dssp SCSSSCCCCCHHHHHHHHCT
T ss_pred ccccCCCCchHHHHHHHhcC
Confidence 34456899999999987653
No 62
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.82 E-value=6.3e-20 Score=178.23 Aligned_cols=177 Identities=20% Similarity=0.265 Sum_probs=138.6
Q ss_pred hcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecCC-----CCCccEEE-eCCHHHHHHHHHHHHH
Q 009323 182 MGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAG-----GGGRGMRL-AKEPDEFVKLLQQAKS 255 (537)
Q Consensus 182 ~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~g-----~gg~Gv~~-v~~~~el~~~~~~~~~ 255 (537)
..||..+|++|+++|||+|++ ..+.+.+++.++++++|||+||||..+ +++.|+.+ +++.+|+.++++.+..
T Consensus 19 ~l~k~~~k~ll~~~GIp~p~~--~~~~~~~ea~~~a~~lg~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~ 96 (238)
T 1wr2_A 19 AMVEYEAKQVLKAYGLPVPEE--KLAKTLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHE 96 (238)
T ss_dssp EECHHHHHHHHHTTTCCCCCC--EEESSHHHHHHHHHHHCSSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCcCCCCe--EEeCCHHHHHHHHHHhCCCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHH
Confidence 359999999999999999999 678999999999999999999999999 77888998 7999999999999887
Q ss_pred HHHHhcC---CCcEEEEeccCCCcEEEEEEEEeC-CCcEEEEeeeecccccccceeEEEcCCCCCCHHHHHHHHHHHHHH
Q 009323 256 EAAAAFG---NDGVYLEKYVQNPRHIEFQVLADK-YGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAA 331 (537)
Q Consensus 256 ~~~~~~~---~~~~lvEe~I~g~~e~~v~v~~d~-~g~v~~~~~r~~~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i 331 (537)
.....++ ...++||+||++.+|+.+.++.|+ .|.++.++.....+...........| ++++..++|.+.+.++
T Consensus 97 ~~~~~~~~~~~~~vlVEe~i~~g~E~~v~v~~d~~~g~v~~~~~Gg~~iE~~~d~~~~~~P---l~~~~~~~~~~~~~~~ 173 (238)
T 1wr2_A 97 NAKKYRPDAEILGVLVAPMLKPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVP---ITEKDARKMIQEIKAY 173 (238)
T ss_dssp HHHHHCTTCCCCEEEEEECCCCCEEEEEEEEEETTTEEEEEEEECSTTHHHHCCCEEEESS---CCHHHHHHHHHTSTTH
T ss_pred hhhhhCCCCccceEEEEECCCCCeEEEEEEEeCCCCCcEEEEecCCceeeeecceeeecCC---CCHHHHHHHHHHHHHH
Confidence 6554443 368999999996699999999997 67777776422222111112222333 8999999999999999
Q ss_pred HHHcCCcceeEEEE-------------EEeCCCCEEEEEEecCCC
Q 009323 332 AASIGYIGVGTVEF-------------LLDERGSFYFMEMNTRIQ 363 (537)
Q Consensus 332 ~~alg~~G~~~vEf-------------~~~~~g~~~~lEiNpR~~ 363 (537)
...+||+|...+++ +.+.+++++++||||++-
T Consensus 174 ~~~~g~~G~~~~d~~~l~~~l~~l~~~~~~~~~~~~~lEINPl~~ 218 (238)
T 1wr2_A 174 PILAGARGEEPADIDAIVDMLLKVSKLVDDLKDYIKEMDLNPVFV 218 (238)
T ss_dssp HHHHCC--CCCBCHHHHHHHHHHHHHHHHHTTTTEEEEEEEEEEE
T ss_pred HHhcCCCCCChhhHHHHHHHHHHHHHHHHcCCCCeEEEeccCeEE
Confidence 99999999765552 223333399999999983
No 63
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.81 E-value=5.5e-20 Score=204.70 Aligned_cols=242 Identities=17% Similarity=0.207 Sum_probs=173.1
Q ss_pred CHHHHHHHHHHcCCCEEEeC--CCcccccHHHHHHHHHCCCceeCCC-HHHHHHhcCHHHHHHHHHHCCCCCCCCcCccC
Q 009323 131 LIPNVLSAAISRGCTMLHPG--YGFLAENAVFVEMCREHGINFIGPN-PDSIRIMGDKSTARETMKNAGVPTVPGSDGLL 207 (537)
Q Consensus 131 ~~~~i~~~a~~~~~d~V~p~--~g~~se~~~~a~~~e~~gi~~~Gp~-~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~ 207 (537)
+.+.|+++|++.++++++.+ .+++.............|. +.|++ ..++..++||..+|++|+++|||+|++ ..+
T Consensus 429 S~~~l~~aA~~~Gi~v~vidp~~~l~~l~~~~~~~~~~~g~-itg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~--~~~ 505 (750)
T 3ln6_A 429 STQLLLFDVIQKGVNFEVLDEQDQFLKLWHNSHIEYVKNGN-MTSKDNYIVPLAMANKVVTKKILDEKHFPTPFG--DEF 505 (750)
T ss_dssp HHHHHHHHHHHHTCEEEESCSSSCEEEEEETTEEEEEETTT-BCTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCC--CCE
T ss_pred cHHHHHHHHHhCCCCEEEECCCchHhhhccCCCcEEEecCC-eeCCCHHHHHHHHhCHHHHHHHHHHCCcCCCCE--EEE
Confidence 56889999999999997754 3333222110000000121 13444 456777789999999999999999999 678
Q ss_pred CCHHHHHHHH-HHhCCcEEEEecCCCCCccEEEeC---CHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEE
Q 009323 208 QSTEEAVKLA-DELGFPVMIKATAGGGGRGMRLAK---EPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVL 283 (537)
Q Consensus 208 ~s~~~~~~~~-~~ig~PvvvKp~~g~gg~Gv~~v~---~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~ 283 (537)
.+.+++.+++ +.+|||+||||..|++|+||.+++ +.+++.++++.+... +..++||+||+| +|++|.++
T Consensus 506 ~~~~ea~~~~~~~~g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~~~~~~------~~~vlVEefI~G-~E~~v~Vv 578 (750)
T 3ln6_A 506 TDRKEALNYFSQIQDKPIVVKPKSTNFGLGISIFKTSANLASYEKAIDIAFTE------DSAILVEEYIEG-TEYRFFVL 578 (750)
T ss_dssp ETTTTHHHHHHHSSSSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEE
T ss_pred CCHHHHHHHHHHhcCCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHHHHHhh------CCcEEEEeccCC-CEEEEEEE
Confidence 8888887777 678999999999999999999998 999999999887643 478999999999 99999998
Q ss_pred EeCCCcEEEEeeeeccc----------------c----c--ccceeEE--------------------EcC---------
Q 009323 284 ADKYGNVVHFGERDCSI----------------Q----R--RNQKLLE--------------------EAP--------- 312 (537)
Q Consensus 284 ~d~~g~v~~~~~r~~~~----------------~----~--~~~~~~~--------------------~~p--------- 312 (537)
. |+++....+.... . + .+.+... .-|
T Consensus 579 g---g~vvaa~~r~p~~v~GdG~~tI~eLI~~~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L~ 655 (750)
T 3ln6_A 579 E---GDCIAVLLRVAANVVGDGIHTISQLVKLKNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIELR 655 (750)
T ss_dssp T---TEEEEEEEEECCEEECCTTCCHHHHHHHHTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEESC
T ss_pred C---CEEEEEEEEecceEecCCccCHHHHHHhhccCccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEEe
Confidence 3 4676665543211 0 0 0000000 000
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC--------CCCEEEEEEecCCCCc-cccchhhc
Q 009323 313 ----------SPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE--------RGSFYFMEMNTRIQVE-HPVTEMIS 373 (537)
Q Consensus 313 ----------~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~--------~g~~~~lEiNpR~~g~-~~~~~~~~ 373 (537)
+...++.+.+++.+.|.++++++|+. ++.||++.++ .|.+++||||++++-. |......+
T Consensus 656 ~~~Nls~Gg~~~d~td~i~p~~~~~a~~aa~~igl~-~~GvDli~~di~~~~~~~~~~~~iiEvN~~pg~~~h~~p~~g~ 734 (750)
T 3ln6_A 656 RNSNISTGGDSIDVTNTMDPTYKQLAAEMAEAMGAW-VCGVDLIIPNATQAYSKDKKNATCIELNFNPLMYMHTYCQEGP 734 (750)
T ss_dssp SSCCTTTTCEEEECTTTSCHHHHHHHHHHHHHHTCS-SCEEEEEESCSSSCCCTTTTCCEEEEEESSCCCHHHHSCSBSC
T ss_pred ecccccCCCceeeccccCCHHHHHHHHHHHHHhCCC-eEEEEEEecCccccccccCCCeEEEEEcCCcchhhhcCcccCC
Confidence 00123445567889999999999985 8899999884 4568999999999554 44445678
Q ss_pred CCCHHHHHHHHHc
Q 009323 374 SVDLIEEQIHVAM 386 (537)
Q Consensus 374 Gidl~~~~i~~a~ 386 (537)
|.|+.+.+++...
T Consensus 735 ~~~v~~~ii~~lf 747 (750)
T 3ln6_A 735 GQSITPRILAKLF 747 (750)
T ss_dssp CCCCHHHHHHHHC
T ss_pred CCcHHHHHHHHhC
Confidence 9999999888754
No 64
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.80 E-value=1.8e-18 Score=172.78 Aligned_cols=219 Identities=15% Similarity=0.124 Sum_probs=157.5
Q ss_pred CCCEEEeCCCccc--cc---HHHHHHHHHCCCceeCCCHHHHHHhcCH----HHHHHHHHHCCC---CCCCCcCccCCCH
Q 009323 143 GCTMLHPGYGFLA--EN---AVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (537)
Q Consensus 143 ~~d~V~p~~g~~s--e~---~~~a~~~e~~gi~~~Gp~~~~i~~~~dK----~~~r~~l~~~Gi---pvp~~~~~~~~s~ 210 (537)
.+|+|++..+... +. -.+...++..|++++ ++++++..++|| ..+.++++++|+ |.++.. ...+.
T Consensus 68 ~~D~vi~R~~~~~~~~~~~~r~vl~~le~~Gvpvi-N~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~--~~~~~ 144 (309)
T 1i7n_A 68 RPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSI-NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQT--YYPNH 144 (309)
T ss_dssp CCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCE--EESSG
T ss_pred cCCEEEEecccccccccchHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEE--eeCCh
Confidence 5799998865433 11 345677999999998 799999999999 567778889998 866652 23343
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcE
Q 009323 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (537)
Q Consensus 211 ~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v 290 (537)
.+ +.+..|||+|+||..|+.|+||.++++.+++++.++..... +..+++||||+..+++.+.++++ ++
T Consensus 145 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VvGg---~v 212 (309)
T 1i7n_A 145 RE---MLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALT------QTYATAEPFIDAKYDIRVQKIGN---NY 212 (309)
T ss_dssp GG---GSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeecCCCceEEEEEECC---EE
Confidence 33 34568999999999999999999999999999888765433 36789999999768899988843 66
Q ss_pred EEEeeee--cccccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCEEEEEEec--CCCCc
Q 009323 291 VHFGERD--CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVE 365 (537)
Q Consensus 291 ~~~~~r~--~~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~al-g~~G~~~vEf~~~~~g~~~~lEiNp--R~~g~ 365 (537)
+.+..+. ..+.. +.......+.+ +++ ++.+.|.++.+++ |+ +++.||++.+++|.+|++|||. -++-
T Consensus 213 ~a~~Rr~~~g~wrt-N~~~~~~e~~~-l~~----e~~~la~~A~~a~gGl-di~GVDll~~~~g~~~V~EVN~~~~P~~- 284 (309)
T 1i7n_A 213 KAYMRTSISGNWKT-NTGSAMLEQIA-MSD----RYKLWVDACSEMFGGL-DICAVKAVHGKDGKDYIFEVMDCSMPLI- 284 (309)
T ss_dssp EEEEEESSCTTTSC-SCCCSSEEEEC-CCH----HHHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCCCC-
T ss_pred EEEEEEcCCCCCee-cCCcceeeecC-CCH----HHHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEECCCCCCCc-
Confidence 6544332 12222 21111111222 455 3568888999999 56 9999999999889899999999 6633
Q ss_pred cccchhhcCCCHHHHHHHHH
Q 009323 366 HPVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 366 ~~~~~~~~Gidl~~~~i~~a 385 (537)
.-.+..++.++.+..+...
T Consensus 285 -~~~~~~~~~~ia~~ii~~~ 303 (309)
T 1i7n_A 285 -GEHQVEDRQLITDLVISKM 303 (309)
T ss_dssp -SSCHHHHHHHHHHHHHHHH
T ss_pred -cchhhhhHHHHHHHHHHHH
Confidence 2444556777777766543
No 65
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.80 E-value=2.5e-18 Score=173.76 Aligned_cols=221 Identities=12% Similarity=0.076 Sum_probs=162.3
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHCCCceeCCCHHHHHHhcCH----HHHHHHHHHCCC---CCCCCcCccCCCH
Q 009323 143 GCTMLHPGYGFLA--E---NAVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (537)
Q Consensus 143 ~~d~V~p~~g~~s--e---~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK----~~~r~~l~~~Gi---pvp~~~~~~~~s~ 210 (537)
..|+|++..+... + .-.+...++..|++++ ++++++..++|| ..+.++++++|+ |.++.. ...+.
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~Gvpvi-N~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t--~~~~~ 161 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAV-NSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQT--FFPNH 161 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEE-SCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCE--EESSS
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceec-CCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEE--ecCch
Confidence 6899999865422 1 1345677899999998 799999999999 667778889988 865542 22333
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcE
Q 009323 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (537)
Q Consensus 211 ~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v 290 (537)
.+ +.+..|||+|+||..|+.|+||.++++.++++..++..... +..+++||||+..+++.+.++++ ++
T Consensus 162 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VVGg---~v 229 (344)
T 2p0a_A 162 KP---MVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMA------KTYATTEAFIDSKYDIRIQKIGS---NY 229 (344)
T ss_dssp TT---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeccCCCccEEEEEECC---EE
Confidence 22 34568999999999999999999999999999888755432 36789999999768899988843 66
Q ss_pred EEEeeee--cccccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCEEEEEEec--CCCCc
Q 009323 291 VHFGERD--CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVE 365 (537)
Q Consensus 291 ~~~~~r~--~~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~al-g~~G~~~vEf~~~~~g~~~~lEiNp--R~~g~ 365 (537)
+.+..+. ..+.. +.......+.+ ++++ +.+.+.++.+++ |+ +++.||++.+++|.+|++|||. .+ +
T Consensus 230 va~~R~~~~g~wrt-N~~~~~~e~~~-l~~e----~~~la~~Aa~a~gGl-di~GVDll~~~~G~~~VlEVN~~~~P--~ 300 (344)
T 2p0a_A 230 KAYMRTSISGNWKA-NTGSAMLEQVA-MTER----YRLWVDSCSEMFGGL-DICAVKAVHSKDGRDYIIEVMDSSMP--L 300 (344)
T ss_dssp EEEEEEESSSCSST-TSSSEEEEEEC-CCHH----HHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCC--C
T ss_pred EEEEEecCCCCCee-cCCceEEEeeC-CCHH----HHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEEcCCCCC--c
Confidence 6543332 12222 22122222333 5554 568888899999 56 8999999999989899999999 55 3
Q ss_pred cccchhhcCCCHHHHHHHHHcC
Q 009323 366 HPVTEMISSVDLIEEQIHVAMG 387 (537)
Q Consensus 366 ~~~~~~~~Gidl~~~~i~~a~G 387 (537)
..-++..++.++.+..++...-
T Consensus 301 ~~~~~~~~~~~Ia~~ii~~i~~ 322 (344)
T 2p0a_A 301 IGEHVEEDRQLMADLVVSKMSQ 322 (344)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHT
T ss_pred ccchhhhHHHHHHHHHHHHHHH
Confidence 4456667888999998887653
No 66
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.79 E-value=3.5e-18 Score=175.49 Aligned_cols=219 Identities=12% Similarity=0.098 Sum_probs=159.8
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHCCCceeCCCHHHHHHhcCH----HHHHHHHHHCCC---CCCCCcCccCCCH
Q 009323 143 GCTMLHPGYGFLA--E---NAVFVEMCREHGINFIGPNPDSIRIMGDK----STARETMKNAGV---PTVPGSDGLLQST 210 (537)
Q Consensus 143 ~~d~V~p~~g~~s--e---~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK----~~~r~~l~~~Gi---pvp~~~~~~~~s~ 210 (537)
..|+|++..+... + .-.+...++..|++++ ++++++..++|| ..+-++++++|+ |.++.. ...+.
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~Gvpvi-Ns~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t--~~~~~ 256 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSV-NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQT--FYPNH 256 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCE--EESSG
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceE--ecCch
Confidence 5799998865433 1 1345677999999998 799999999999 556777888988 755542 23333
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCCcEEEEEEEEeCCCcE
Q 009323 211 EEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKYGNV 290 (537)
Q Consensus 211 ~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~~e~~v~v~~d~~g~v 290 (537)
.+ +++..|||+|+||..|+.|+||.++++.++++..++..... +..+++||||+..+++.+.|+++ ++
T Consensus 257 ~~---~i~~~g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~~------~~~~~vQEfI~~g~DIRv~VVGg---~v 324 (422)
T 1pk8_A 257 KE---MLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALT------KTYATAEPFIDAKYDVRVQKIGQ---NY 324 (422)
T ss_dssp GG---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TSCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhcc------CceEEEEeecCCCceEEEEEECC---EE
Confidence 22 34568999999999999999999999999999888765443 36789999999768899988843 66
Q ss_pred EEEeeee--cccccccceeEEEcCCCCCCHHHHHHHHHHHHHHHHHc-CCcceeEEEEEEeCCCCEEEEEEec--CCCCc
Q 009323 291 VHFGERD--CSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASI-GYIGVGTVEFLLDERGSFYFMEMNT--RIQVE 365 (537)
Q Consensus 291 ~~~~~r~--~~~~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~i~~al-g~~G~~~vEf~~~~~g~~~~lEiNp--R~~g~ 365 (537)
+.+..+. ..+.. +.......+.+ ++++ +.+++.++.+++ |+ +++.||++.+++|.+||+|||. .+ .
T Consensus 325 va~~Rr~~~g~Wrt-Nvg~g~~e~i~-lt~e----~~elA~kAaka~gGl-diaGVDlL~s~dG~~~VlEVN~s~~P--~ 395 (422)
T 1pk8_A 325 KAYMRTSVSGNWKT-NTGSAMLEQIA-MSDR----YKLWVDTCSEIFGGL-DICAVEALHGKDGRDHIIEVVGSSMP--L 395 (422)
T ss_dssp EEEEEEESSSCSST-TSSCEEEEEEC-CCHH----HHHHHHHHTTGGGCC-SEEEEEEEEETTSCEEEEEEECTTCC--C
T ss_pred EEEEEEcCCCCcee-ccCceeeeeeC-CCHH----HHHHHHHHHHHhCCC-CEEEEEEEEcCCCCEEEEEECCCCCC--C
Confidence 6544332 12322 22222222332 5554 568889999999 66 8999999999989899999999 55 3
Q ss_pred cccchhhcCCCHHHHHHHHH
Q 009323 366 HPVTEMISSVDLIEEQIHVA 385 (537)
Q Consensus 366 ~~~~~~~~Gidl~~~~i~~a 385 (537)
..-++..++.++.+..+...
T Consensus 396 ~~g~~~~~~~~IA~~ii~~i 415 (422)
T 1pk8_A 396 IGDHQDEDKQLIVELVVNKM 415 (422)
T ss_dssp CTTCHHHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHHHH
Confidence 33555667888888887765
No 67
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.72 E-value=7.3e-17 Score=164.69 Aligned_cols=227 Identities=11% Similarity=0.141 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCCc-ccc----
Q 009323 82 IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYGF-LAE---- 156 (537)
Q Consensus 82 ~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~g~-~se---- 156 (537)
+..++++++++.|++++.++. +..... + ..+|+|++..+. ..|
T Consensus 34 ~~~~l~~al~~~G~~~~~iD~--~~~~~~------------------~------------~~~Dvvi~~l~~~~~ea~~~ 81 (346)
T 2q7d_A 34 NFQAFAELCRKRGMEVVQLNL--SRPIEE------------------Q------------GPLDVIIHKLTDVILEADQN 81 (346)
T ss_dssp THHHHHHHHHTTTCEEEECCT--TSCSGG------------------G------------CCCSEEEECCHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCcEEEEccc--ccchhh------------------c------------CCCCEEEeCCcccccccccC
Confidence 357899999999999998842 211100 0 257778876421 111
Q ss_pred ----cHH---HHHHHH-HCCCceeCCCHHHHHHhcCHHHHHHHHHHC-------CCCCCCCcCccCCC--HHHHHHHHH-
Q 009323 157 ----NAV---FVEMCR-EHGINFIGPNPDSIRIMGDKSTARETMKNA-------GVPTVPGSDGLLQS--TEEAVKLAD- 218 (537)
Q Consensus 157 ----~~~---~a~~~e-~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~-------Gipvp~~~~~~~~s--~~~~~~~~~- 218 (537)
... +.+... ..|++++ ++++++..+.||..+.++|+++ |||+|++ ..+.+ .+++.+..+
T Consensus 82 d~~~~~~~~~l~~~~~~~~gv~vi-np~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t--~~~~~~~~~~~~~~~~~ 158 (346)
T 2q7d_A 82 DSQSLELVHRFQEYIDAHPETIVL-DPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPF--MELTSLCGDDTMRLLEK 158 (346)
T ss_dssp CHHHHHHHHHHHHHHHHCTTSEEE-SCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCE--EEECSCCCTTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCeEEc-CCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCE--EEEeCCCHHHHHHHHHh
Confidence 111 112211 2478877 7999999999999999999997 9999998 44544 244544443
Q ss_pred -HhCCcEEEEecCCCC--CccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCC-CcEEEEEEEEeCCCcEEEEe
Q 009323 219 -ELGFPVMIKATAGGG--GRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-PRHIEFQVLADKYGNVVHFG 294 (537)
Q Consensus 219 -~ig~PvvvKp~~g~g--g~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g-~~e~~v~v~~d~~g~v~~~~ 294 (537)
.++||+|+||..|.| +.|+.++.+.++|... +..+++||||+. ++++.|.|+++ +++...
T Consensus 159 ~~lg~P~VvKP~~g~Gs~s~~v~~v~~~~~l~~~-------------~~~~lvQefI~~~G~dirv~VvG~---~v~~~~ 222 (346)
T 2q7d_A 159 NGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAI-------------QPPCVVQNFINHNAVLYKVFVVGE---SYTVVQ 222 (346)
T ss_dssp TTCCSSEEEECSBCSSTTCCEEEEECSGGGTTC---------------CCEEEEECCCCTTEEEEEEEETT---EEEEEE
T ss_pred cCCCCCEEEEecCCCcceeeeeEEecCHHHHHhc-------------CCCEEEEEeeCCCCeEEEEEEECC---EEEEEE
Confidence 578999999997643 6799999999988752 267999999982 38899888743 555442
Q ss_pred eeeccccccc-----------ce---eEE---EcC------CCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEEeC-C
Q 009323 295 ERDCSIQRRN-----------QK---LLE---EAP------SPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDE-R 350 (537)
Q Consensus 295 ~r~~~~~~~~-----------~~---~~~---~~p------~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~~~~-~ 350 (537)
.+.....+.. .+ ... .+| ...+++ .+++.+.|.++.++||+..+ .+|+++++ +
T Consensus 223 r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~~~~--~~el~~lA~~a~~alGl~~~-gvDii~~~~~ 299 (346)
T 2q7d_A 223 RPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPS--DEVIRELSRALRQALGVSLF-GIDIIINNQT 299 (346)
T ss_dssp EECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCCCCC--HHHHHHHHHHHHHHHCCCEE-EEEEEECTTT
T ss_pred EecCCCcCcCccccccccccceeeccCCccccccccccccccccCCC--hHHHHHHHHHHHHHhCCceE-eeEEEeecCC
Confidence 2211000000 00 000 011 011222 46889999999999999855 59999995 6
Q ss_pred CCEEEEEEecCC
Q 009323 351 GSFYFMEMNTRI 362 (537)
Q Consensus 351 g~~~~lEiNpR~ 362 (537)
|++||||||+-+
T Consensus 300 g~~~VlEVN~~P 311 (346)
T 2q7d_A 300 GQHAVIDINAFP 311 (346)
T ss_dssp CCEEEEEEEESC
T ss_pred CCEEEEEEeCCc
Confidence 789999999965
No 68
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=6.2e-18 Score=142.98 Aligned_cols=104 Identities=45% Similarity=0.756 Sum_probs=90.6
Q ss_pred HHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHH
Q 009323 180 RIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAA 259 (537)
Q Consensus 180 ~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~ 259 (537)
..++||..++++|+++|||+|+++...+.+.+++.+++++++||+|+||..|+||+|+.++++.+|+.++++.+......
T Consensus 4 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~~ 83 (108)
T 2cqy_A 4 GSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAAS 83 (108)
T ss_dssp CCCCCCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHCSSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHh
Confidence 46789999999999999999998312678999999999999999999999999999999999999999999988765444
Q ss_pred hcCCCcEEEEeccCCCcEEEEEEE
Q 009323 260 AFGNDGVYLEKYVQNPRHIEFQVL 283 (537)
Q Consensus 260 ~~~~~~~lvEe~I~g~~e~~v~v~ 283 (537)
.+++..++||+||+|.+|+++.++
T Consensus 84 ~~~~~~~lvee~i~g~~E~~v~v~ 107 (108)
T 2cqy_A 84 SFGDDRLLIEKFIDNPRHISGPSS 107 (108)
T ss_dssp HTSSCCEEEEECCSSSSCCCSCCC
T ss_pred hcCCCcEEEeeccCCCcEEEEEec
Confidence 455678999999999669888764
No 69
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=99.51 E-value=2.2e-14 Score=148.31 Aligned_cols=169 Identities=20% Similarity=0.285 Sum_probs=121.1
Q ss_pred CHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCC-cEEEEec--CCCCCcc---------EEEeCCHHHHHHHHH
Q 009323 184 DKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGF-PVMIKAT--AGGGGRG---------MRLAKEPDEFVKLLQ 251 (537)
Q Consensus 184 dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~-PvvvKp~--~g~gg~G---------v~~v~~~~el~~~~~ 251 (537)
+++.+|++|+++|||+|++ ..+.+.+++.++++++|| |+||||. .|+.|+| |+++++.+|+.++++
T Consensus 4 ~E~~aK~lL~~~GIpvp~~--~~~~s~~ea~~~a~~lg~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a~~ 81 (395)
T 2fp4_B 4 QEYQSKKLMSDNGVKVQRF--FVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAK 81 (395)
T ss_dssp CHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcCCCCe--EEECCHHHHHHHHHHcCCCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHHHH
Confidence 6789999999999999999 788999999999999999 8999994 5565555 999999999999998
Q ss_pred HHHHHHH--Hhc---C--CCcEEEEeccCCCcEEEEEEEEeCCC--cEEEEe-eeeccccc----ccceeEEEc--CCCC
Q 009323 252 QAKSEAA--AAF---G--NDGVYLEKYVQNPRHIEFQVLADKYG--NVVHFG-ERDCSIQR----RNQKLLEEA--PSPA 315 (537)
Q Consensus 252 ~~~~~~~--~~~---~--~~~~lvEe~I~g~~e~~v~v~~d~~g--~v~~~~-~r~~~~~~----~~~~~~~~~--p~~~ 315 (537)
++..... ... + ...++||+|++..+|+.+.++.|+.. .++.++ ...+.+.. ...++.... |...
T Consensus 82 ~~l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~~~~pvi~~s~~GG~~iE~va~~~~d~i~~~~idp~~~ 161 (395)
T 2fp4_B 82 QMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEG 161 (395)
T ss_dssp TTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECCTTTC
T ss_pred HHhhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccccCceEEEEECCCCccceeccccCCceEEEEecCCCCC
Confidence 8754320 001 1 24799999999669999999999862 566665 33333321 123344333 4434
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCcceeEEE----------EEEeCCCCEEEEEEecCCC
Q 009323 316 LTPELRKAMGDAAVAAAASIGYIGVGTVE----------FLLDERGSFYFMEMNTRIQ 363 (537)
Q Consensus 316 l~~~~~~~i~~~a~~i~~alg~~G~~~vE----------f~~~~~g~~~~lEiNpR~~ 363 (537)
+++ ..++++++.+|+.+...-. ++.+ . +++++||||++-
T Consensus 162 l~~-------~~a~~l~~~lg~~~~~~~~~~~~l~~l~~l~~~-~-d~~~lEINPl~~ 210 (395)
T 2fp4_B 162 IKD-------SQAQRMAENLGFLGPLQNQAADQIKKLYNLFLK-I-DATQVEVNPFGE 210 (395)
T ss_dssp CCH-------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH-T-TEEEEEEEEEEE
T ss_pred CCH-------HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhhh-C-CeEEEEeeeEEE
Confidence 666 4467777888887542111 2222 3 499999999983
No 70
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=99.51 E-value=9.4e-15 Score=142.23 Aligned_cols=199 Identities=14% Similarity=0.104 Sum_probs=135.3
Q ss_pred CCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCH------------H
Q 009323 144 CTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQST------------E 211 (537)
Q Consensus 144 ~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~------------~ 211 (537)
+|.+++.|+.---...+.+.++..+..++ ++..++..+.||....++|+++|||+|++. .+... +
T Consensus 58 ~d~lisf~s~gfpl~kai~y~~lr~p~~I-Nd~~~q~~~~DK~~~~~iL~~~gIPtP~t~--~~~rd~~~~~~~~~~e~~ 134 (330)
T 3t7a_A 58 CDCLISFHSKGFPLDKAVAYAKLRNPFVI-NDLNMQYLIQDRREVYSILQAEGILLPRYA--ILNRDPNNPKECNLIEGE 134 (330)
T ss_dssp CSEEEECCCTTCCHHHHHHHHHHHCCEES-BCSTHHHHHTBHHHHHHHHHHTTCCCCCEE--EECCBTTBGGGSSEEECS
T ss_pred CCEEEEeccCCCcHHHHHHHHHHhCCcee-CCHHHHHHHHHHHHHHHHHHHcCCCCCCEE--EEeCCCCCccccceeccc
Confidence 78888765321122345566777665555 899999999999999999999999999984 33321 1
Q ss_pred HHHH-HHHHhCCcEEEEecCCC-----------CC----ccEEEeCCHHHH---HHHHHHHHHHHHHhcCCCcEEEEecc
Q 009323 212 EAVK-LADELGFPVMIKATAGG-----------GG----RGMRLAKEPDEF---VKLLQQAKSEAAAAFGNDGVYLEKYV 272 (537)
Q Consensus 212 ~~~~-~~~~ig~PvvvKp~~g~-----------gg----~Gv~~v~~~~el---~~~~~~~~~~~~~~~~~~~~lvEe~I 272 (537)
+..+ ..+.+++|+|+||..|. .| +-++++.|.+.. ...+ ..+..+++||||
T Consensus 135 d~i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~v----------r~~~~~i~QEFI 204 (330)
T 3t7a_A 135 DHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNV----------RKTGSYIYEEFM 204 (330)
T ss_dssp SEEEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSC----------CSSSCEEEEECC
T ss_pred hhhhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhh----------ccCCcEEEEecc
Confidence 1111 23456799999999995 22 334455544321 1111 114789999999
Q ss_pred CC-CcEEEEEEEEeCCCcEEEEeeeecc----cccccceeEEE-cCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEE
Q 009323 273 QN-PRHIEFQVLADKYGNVVHFGERDCS----IQRRNQKLLEE-APSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFL 346 (537)
Q Consensus 273 ~g-~~e~~v~v~~d~~g~v~~~~~r~~~----~~~~~~~~~~~-~p~~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~ 346 (537)
+. ++++.+-++++ ++++...|... ..+++..-.+. .|.. ++++. .++|.++++++|. +++.||++
T Consensus 205 ~~~G~DIRv~vVG~---~vv~Am~R~sp~~~G~~r~N~~gG~~~~~v~-Lt~ee----k~iA~kaa~a~G~-~v~GVDlL 275 (330)
T 3t7a_A 205 PTDGTDVKVYTVGP---DYAHAEARKSPALDGKVERDSEGKEVRYPVI-LNARE----KLIAWKVCLAFKQ-TVCGFDLL 275 (330)
T ss_dssp CCSSEEEEEEEEST---TCEEEEEEECTTSSCBCCBCTTSCBCCEECC-CCHHH----HHHHHHHHHHTTB-SEEEEEEE
T ss_pred CCCCceEEEEEECC---EEEEEEEEeCCCCCCcEEEcCCCCceeeeec-CCHHH----HHHHHHHHHHhCC-ceEEEEEE
Confidence 73 48888888743 77877777542 23333332222 2443 67654 4889999999998 88899999
Q ss_pred EeCCCCEEEEEEecCCCCc
Q 009323 347 LDERGSFYFMEMNTRIQVE 365 (537)
Q Consensus 347 ~~~~g~~~~lEiNpR~~g~ 365 (537)
.+++| +|++|+|.+..+-
T Consensus 276 rs~~~-~~V~EVNg~~fvk 293 (330)
T 3t7a_A 276 RANGQ-SYVCDVNGFSFVK 293 (330)
T ss_dssp EETTE-EEEEEEEESCCCS
T ss_pred EECCc-cEEEEeCCCcccc
Confidence 99766 9999999999765
No 71
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=99.49 E-value=3.5e-14 Score=146.70 Aligned_cols=169 Identities=15% Similarity=0.239 Sum_probs=119.9
Q ss_pred CHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCc-EEEEecCCCCCc----cEEEeCCHHHHHHHHHHHHHHHH
Q 009323 184 DKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFP-VMIKATAGGGGR----GMRLAKEPDEFVKLLQQAKSEAA 258 (537)
Q Consensus 184 dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~P-vvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~ 258 (537)
+++.+|++|+++|||+|++ ..+.+.+++.++++++||| +||||..+.||+ ||+++++.+|+.++++++.....
T Consensus 4 ~E~~aK~lL~~~GIpvp~~--~~~~s~eea~~aa~~lG~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~~~ 81 (388)
T 2nu8_B 4 HEYQAKQLFARYGLPAPVG--YACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRL 81 (388)
T ss_dssp CHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSEE
T ss_pred CHHHHHHHHHHCCcCCCCe--eEECCHHHHHHHHHHhCCCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhhhh
Confidence 7899999999999999999 7889999999999999999 999999875544 99999999999999988754210
Q ss_pred -------HhcCCCcEEEEeccCCCcEEEEEEEEeCC-C-cEEEEe-ee--ecc-ccccc-ceeEE--EcCCCCCCHHHHH
Q 009323 259 -------AAFGNDGVYLEKYVQNPRHIEFQVLADKY-G-NVVHFG-ER--DCS-IQRRN-QKLLE--EAPSPALTPELRK 322 (537)
Q Consensus 259 -------~~~~~~~~lvEe~I~g~~e~~v~v~~d~~-g-~v~~~~-~r--~~~-~~~~~-~~~~~--~~p~~~l~~~~~~ 322 (537)
.......++||+|+++.+|+.+.++.|+. | .++.++ .. +.. +..++ .++.. ..|...+++..
T Consensus 82 ~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~~g~pvi~~~~~GGv~iE~v~~~~pd~i~~~~i~P~~gl~~~~-- 159 (388)
T 2nu8_B 82 VTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQ-- 159 (388)
T ss_dssp CCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECBTTTBCCHHH--
T ss_pred hccccCCCCcccceEEEEEccccCCcEEEEEEEecccCCcEEEEeCCCCcchhhccccCCceEEEEecCCCCCCCHHH--
Confidence 00113579999999965999999999986 3 566665 21 111 12211 33343 45655577754
Q ss_pred HHHHHHHHHHHHcCCcceeE---E-------EEEEeCCCCEEEEEEecCCC
Q 009323 323 AMGDAAVAAAASIGYIGVGT---V-------EFLLDERGSFYFMEMNTRIQ 363 (537)
Q Consensus 323 ~i~~~a~~i~~alg~~G~~~---v-------Ef~~~~~g~~~~lEiNpR~~ 363 (537)
++++++.+|+.+... . +++.+. +++++||||++-
T Consensus 160 -----a~~~~~~lG~~~~~~~~~~~~l~~l~~~~~~~--d~~~lEINPl~~ 203 (388)
T 2nu8_B 160 -----GRELAFKLGLEGKLVQQFTKIFMGLATIFLER--DLALIEINPLVI 203 (388)
T ss_dssp -----HHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHT--TEEEEEEEEEEE
T ss_pred -----HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhC--CEEEEEecceEE
Confidence 445555567764210 1 122233 499999999984
No 72
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=99.32 E-value=6.1e-12 Score=130.18 Aligned_cols=109 Identities=28% Similarity=0.385 Sum_probs=89.0
Q ss_pred CHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecCCCCCc----cEEEeCCHHHHHHHHHHHHHHHHH
Q 009323 184 DKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGR----GMRLAKEPDEFVKLLQQAKSEAAA 259 (537)
Q Consensus 184 dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~~~~~~~~~~ 259 (537)
+-+.+|++|+++|||+|++ ..+.+.+++.++++++|||+|+||....||+ ||+++++.+|+.++++++......
T Consensus 4 ~E~~aK~lL~~~GIpvp~~--~~~~s~eea~~aa~~lG~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~~~ 81 (397)
T 3ufx_B 4 HEYQAKEILARYGVPVPPG--KVAYTPEEAKRIAEEFGKRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMNIK 81 (397)
T ss_dssp CHHHHHHHHHHTTCCCCCE--EEESSHHHHHHHHHHHTSCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCEET
T ss_pred CHHHHHHHHHHCCCCCCCe--EEECCHHHHHHHHHHcCCCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhhcc
Confidence 4578899999999999999 7899999999999999999999998855554 999999999999999887542111
Q ss_pred hcCCCcEEEEeccCCCcEEEEEEEEeCCC--cEEEEe
Q 009323 260 AFGNDGVYLEKYVQNPRHIEFQVLADKYG--NVVHFG 294 (537)
Q Consensus 260 ~~~~~~~lvEe~I~g~~e~~v~v~~d~~g--~v~~~~ 294 (537)
.+....+++|+|++..+|+.+.++.|+.. .++.++
T Consensus 82 g~~~~~vlVEe~v~~g~El~vgv~~D~~~g~pvi~~s 118 (397)
T 3ufx_B 82 GLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLMLS 118 (397)
T ss_dssp TEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEE
T ss_pred CCccceEEEEEeecCCeeEEEEEEecCCCCCcEEEEe
Confidence 11236899999999559999999999864 344443
No 73
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=98.01 E-value=0.00015 Score=73.84 Aligned_cols=157 Identities=18% Similarity=0.314 Sum_probs=91.1
Q ss_pred CCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCC-------Cc--EEEEEEEEeCCCcEE
Q 009323 221 GFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQN-------PR--HIEFQVLADKYGNVV 291 (537)
Q Consensus 221 g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g-------~~--e~~v~v~~d~~g~v~ 291 (537)
+.++|+||..|+.|+|++++++.+++.+.++.. ...++||+||+. .+ ++.+-|+....-++.
T Consensus 147 ~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~---------~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvts~l~vy 217 (380)
T 3tig_A 147 GNVWIAKSSSGAKGEGILISSDATELLDFIDNQ---------GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDNQYNIY 217 (380)
T ss_dssp CCCEEEEESCC----CCBCCSCSHHHHHHHHHH---------TSCEEEEECCSSBCCBTTTTBCEEEEEEEEECTTCCEE
T ss_pred CCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc---------CCcEEEEecccCceeecCCCceeEEEEEEEEcCCCEEE
Confidence 578999999999999999999999998877531 368999999963 23 566666654322222
Q ss_pred EEe---eeecc-------------------cccccce-eE---EEcC-----------C--C-CCCHHHHHHHHHHHHHH
Q 009323 292 HFG---ERDCS-------------------IQRRNQK-LL---EEAP-----------S--P-ALTPELRKAMGDAAVAA 331 (537)
Q Consensus 292 ~~~---~r~~~-------------------~~~~~~~-~~---~~~p-----------~--~-~l~~~~~~~i~~~a~~i 331 (537)
.+- .|-|+ +|..+.. .. +..- . . .....+..+|.+++...
T Consensus 218 ~y~~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~~~~g~~~~~~~f~~yL~~~~~~~~~~~i~~~I~~ii~~~ 297 (380)
T 3tig_A 218 LYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEGNEMFFEEFNQYLVTSLNINLENSILCQIKEIIRVC 297 (380)
T ss_dssp ECSCCEEEECC----------------------------------CCBCHHHHHHHHSTTSSCCHHHHTHHHHHHHHHHH
T ss_pred EEcCCEEEecCCCcCccchhhhhhhccccccccccccccccccCCCcCcHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 110 01110 1110000 00 0000 0 0 01134556677766665
Q ss_pred HHH----c-----CCc--ceeEEEEEEeCCCCEEEEEEecCCCCccccchhhcCCCHHHHHHHHHcCCCCC
Q 009323 332 AAS----I-----GYI--GVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIHVAMGGKLR 391 (537)
Q Consensus 332 ~~a----l-----g~~--G~~~vEf~~~~~g~~~~lEiNpR~~g~~~~~~~~~Gidl~~~~i~~a~G~~l~ 391 (537)
+.+ + .+. ..+++||++|++.++++||||..++-...++ -++++..++++..--++
T Consensus 298 l~a~~~~i~~~~~~~~~FEl~G~D~lid~~l~~wllEVN~~P~~~q~~i-----~~l~~~~~~iavdp~f~ 363 (380)
T 3tig_A 298 LSCLEPAISTKYLPYHSFQLFGFDFMVDKNLKVWLIEVNGAPACAQKLY-----AELCKGIVDLAISSVFP 363 (380)
T ss_dssp HHHHHHHHCCTTSSSEECEEEEEEEEEBTTCCEEEEEEESSCCCCTTTH-----HHHHHHHHHHTTTTTSC
T ss_pred HHHHHHHhhhcccCCceEEEEeEEEEEcCCCcEEEEEEeCCCCccHHhH-----HHHHHHHHHHhcccccC
Confidence 554 2 122 5788999999999999999999996443221 23678888888765443
No 74
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=97.38 E-value=0.00016 Score=74.83 Aligned_cols=108 Identities=12% Similarity=0.004 Sum_probs=78.1
Q ss_pred HHHHHHHHHHCCC---C-CCC--CcCccC---CCHHHHHHHHHHhC-CcEEEEecCCCC----CccEEEeCCHHHHHHHH
Q 009323 185 KSTARETMKNAGV---P-TVP--GSDGLL---QSTEEAVKLADELG-FPVMIKATAGGG----GRGMRLAKEPDEFVKLL 250 (537)
Q Consensus 185 K~~~r~~l~~~Gi---p-vp~--~~~~~~---~s~~~~~~~~~~ig-~PvvvKp~~g~g----g~Gv~~v~~~~el~~~~ 250 (537)
-+..|++|.++++ | +.+ + ..+ .|.+++.+.++.+| ||+|+|+..-.| +-||.+..+++|+.+++
T Consensus 8 Ey~~K~ll~~~~~~~~~~~~~~~~--~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa 85 (425)
T 3mwd_A 8 EQTGKELLYKFICTTSAIQNRFKY--ARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWL 85 (425)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCC--EEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhccccCCccCCcce--EEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHH
Confidence 3678889999999 4 222 2 233 45688888888999 999999966322 23799999999999988
Q ss_pred HHHHHHHHHh----cCCCcEEEEeccCC--CcEEEEEEEEeCCCcEEEEe
Q 009323 251 QQAKSEAAAA----FGNDGVYLEKYVQN--PRHIEFQVLADKYGNVVHFG 294 (537)
Q Consensus 251 ~~~~~~~~~~----~~~~~~lvEe~I~g--~~e~~v~v~~d~~g~v~~~~ 294 (537)
+++....... ..-..++||++++. .+|+-+.+..|+.|.++.++
T Consensus 86 ~~ml~~~~~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~gpvI~~s 135 (425)
T 3mwd_A 86 KPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (425)
T ss_dssp TTTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHHhhhhhccCCCceEEEEEEEecccCCCCceEEEEEEecCCCCEEEEE
Confidence 8765322100 00236999999975 48999999999988877665
No 75
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=97.17 E-value=0.0003 Score=78.34 Aligned_cols=108 Identities=13% Similarity=0.046 Sum_probs=79.1
Q ss_pred HHHHHHHHHHCCCC------CCCCcCccCC---CHHHHHHHHHHhC-CcEEEEecCCCCCc----cEEEeCCHHHHHHHH
Q 009323 185 KSTARETMKNAGVP------TVPGSDGLLQ---STEEAVKLADELG-FPVMIKATAGGGGR----GMRLAKEPDEFVKLL 250 (537)
Q Consensus 185 K~~~r~~l~~~Gip------vp~~~~~~~~---s~~~~~~~~~~ig-~PvvvKp~~g~gg~----Gv~~v~~~~el~~~~ 250 (537)
-+..|++|.++++| .+++ ..++ +.+++.+.++.+| +|+|+|+..-.||| ||.+..|++|+++++
T Consensus 8 Ey~aK~ll~~~~~~~~~~~~~~~~--~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~aa 85 (829)
T 3pff_A 8 EQTGKELLYKFICTTSAIQNRFKY--ARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWL 85 (829)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCC--EEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhCccccccccCCce--EEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHHH
Confidence 36788999999998 3344 3444 4577777777888 99999996655443 588999999999998
Q ss_pred HHHHHHHHH-hc---CCCcEEEEeccCC--CcEEEEEEEEeCCCcEEEEe
Q 009323 251 QQAKSEAAA-AF---GNDGVYLEKYVQN--PRHIEFQVLADKYGNVVHFG 294 (537)
Q Consensus 251 ~~~~~~~~~-~~---~~~~~lvEe~I~g--~~e~~v~v~~d~~g~v~~~~ 294 (537)
+++...... .. .-..++||++++. .+|+-+.+..|+.|.++.++
T Consensus 86 ~~iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~gpvIm~s 135 (829)
T 3pff_A 86 KPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (829)
T ss_dssp TTTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCCCCEEEEE
Confidence 876532211 00 0146999999975 48999999999988877765
No 76
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.57 E-value=0.0076 Score=49.89 Aligned_cols=94 Identities=10% Similarity=0.104 Sum_probs=61.1
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcC-CCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G-~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|+++|+|+|.|.++..+++.+.+.| +++++++.+.+.........-..+.. +..+.+.+.+.. .++|.|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-------d~~~~~~~~~~~--~~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQV-------DAKDEAGLAKAL--GGFDAVI 74 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEEC-------CTTCHHHHHHHT--TTCSEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEe-------cCCCHHHHHHHH--cCCCEEE
Confidence 4679999999999999999999999 88888854332111111111123333 245666666665 3699999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~G 173 (537)
-..+.. ....+...+.+.|+.++-
T Consensus 75 ~~~~~~-~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 75 SAAPFF-LTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp ECSCGG-GHHHHHHHHHHTTCEEEC
T ss_pred ECCCch-hhHHHHHHHHHhCCCEEE
Confidence 776542 234566777777877653
No 77
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.44 E-value=0.042 Score=54.99 Aligned_cols=93 Identities=13% Similarity=0.047 Sum_probs=64.1
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-------ccCEEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-------LADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-------~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~ 142 (537)
+++|||+|+ |.+|..+++.+.+.|++|+++..+.+....... .--+.+.. ++.|.+.+.++.++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~-------Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYG-------LINEQEAMEKILKEH 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEe-------ecCCHHHHHHHHhhC
Confidence 468999996 999999999999999999998765432211111 11233433 467888999999878
Q ss_pred CCCEEEeCCCcccc--cHHHHHHHHHCC-Cc
Q 009323 143 GCTMLHPGYGFLAE--NAVFVEMCREHG-IN 170 (537)
Q Consensus 143 ~~d~V~p~~g~~se--~~~~a~~~e~~g-i~ 170 (537)
++|.|+...+...- ...+.+++.+.| +.
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~ 113 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAVGTIK 113 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHHCCCS
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHcCCce
Confidence 99999987664211 135666777777 64
No 78
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.20 E-value=0.0059 Score=52.78 Aligned_cols=91 Identities=14% Similarity=-0.013 Sum_probs=54.2
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
++++|+|+|.|.++..+++.+.+.|+++++++.+++.........-..+. + +..+.+.+.++ .-.++|.|+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~-g------d~~~~~~l~~~-~~~~~d~vi~ 76 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVI-A------DPTDESFYRSL-DLEGVSAVLI 76 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-C------CTTCHHHHHHS-CCTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEE-C------CCCCHHHHHhC-CcccCCEEEE
Confidence 35789999999999999999999999999996544321111111122332 2 23344444332 2246898887
Q ss_pred CCCcccccHHHHHHHHHCC
Q 009323 150 GYGFLAENAVFVEMCREHG 168 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~g 168 (537)
..+....+......+.+.+
T Consensus 77 ~~~~~~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 77 TGSDDEFNLKILKALRSVS 95 (141)
T ss_dssp CCSCHHHHHHHHHHHHHHC
T ss_pred ecCCHHHHHHHHHHHHHhC
Confidence 6653323344445555544
No 79
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.07 E-value=0.0056 Score=53.11 Aligned_cols=117 Identities=12% Similarity=0.016 Sum_probs=66.2
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
.+.++|+|+|.|.++..+++.+++.|+++++++.+++........ +..+..+ +..+.+.+. .+.-.++|+|+
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-g~~~i~g------d~~~~~~l~-~a~i~~ad~vi 76 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-GVRAVLG------NAANEEIMQ-LAHLECAKWLI 76 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEES------CTTSHHHHH-HTTGGGCSEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-CCCEEEC------CCCCHHHHH-hcCcccCCEEE
Confidence 446789999999999999999999999999997654422211222 2222233 233334333 33335689888
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
...+...++......+...+ |....+....|.... +.|+++|+..
T Consensus 77 ~~~~~~~~n~~~~~~a~~~~-----~~~~iiar~~~~~~~-~~l~~~G~d~ 121 (140)
T 3fwz_A 77 LTIPNGYEAGEIVASARAKN-----PDIEIIARAHYDDEV-AYITERGANQ 121 (140)
T ss_dssp ECCSCHHHHHHHHHHHHHHC-----SSSEEEEEESSHHHH-HHHHHTTCSE
T ss_pred EECCChHHHHHHHHHHHHHC-----CCCeEEEEECCHHHH-HHHHHCCCCE
Confidence 66553333333333333321 222233344455444 4567777763
No 80
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.72 E-value=0.019 Score=49.18 Aligned_cols=76 Identities=18% Similarity=0.168 Sum_probs=46.3
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
++++|+|+|.|.++..+++.+.+.|+++++++.+.+............+.. +..+.+.+.++ .-.++|.|+-
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~-------d~~~~~~l~~~-~~~~~d~vi~ 76 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIA-------NATEENELLSL-GIRNFEYVIV 76 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEEC-------CTTCHHHHHTT-TGGGCSEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEe-------CCCCHHHHHhc-CCCCCCEEEE
Confidence 357899999999999999999999999998865432111111111223321 23344444332 1246899887
Q ss_pred CCCc
Q 009323 150 GYGF 153 (537)
Q Consensus 150 ~~g~ 153 (537)
..+.
T Consensus 77 ~~~~ 80 (144)
T 2hmt_A 77 AIGA 80 (144)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 6553
No 81
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.54 E-value=0.15 Score=46.19 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=48.7
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
|+|||.|+ |.++..+++.+.+.|++|+++..+.+.........-+.+.. +..+.+.+.++.+ ++|.|+-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~--~~d~vi~~ 74 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVG-------DVLQAADVDKTVA--GQDAVIVL 74 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEES-------CTTSHHHHHHHHT--TCSEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEe-------cCCCHHHHHHHHc--CCCEEEEC
Confidence 68999996 99999999999999999999875543221100001122332 3566777777764 58988866
Q ss_pred CCc
Q 009323 151 YGF 153 (537)
Q Consensus 151 ~g~ 153 (537)
-+.
T Consensus 75 a~~ 77 (206)
T 1hdo_A 75 LGT 77 (206)
T ss_dssp CCC
T ss_pred ccC
Confidence 543
No 82
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.35 E-value=0.14 Score=50.32 Aligned_cols=121 Identities=17% Similarity=0.227 Sum_probs=74.9
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh----hccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV----KLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~----~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 144 (537)
|+++|||+| .|.++..+++.+.+.|++|+++..+.+...... ..--+.+.. ++.|.+.+.++.+ ++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~-------Dl~d~~~l~~a~~--~~ 80 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKG-------ELDEHEKLVELMK--KV 80 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHT--TC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEe-------cCCCHHHHHHHHc--CC
Confidence 456899999 489999999999999999999876543111100 011133433 3677788887774 69
Q ss_pred CEEEeCCCccc-c-cHHHHHHHHHCC-Cc-ee----CCC-------HHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 145 TMLHPGYGFLA-E-NAVFVEMCREHG-IN-FI----GPN-------PDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 145 d~V~p~~g~~s-e-~~~~a~~~e~~g-i~-~~----Gp~-------~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
|+|+-..+... + ...+.+++.+.| +. ++ |.. .........|....+++++.|+++
T Consensus 81 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 150 (318)
T 2r6j_A 81 DVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPY 150 (318)
T ss_dssp SEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred CEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCe
Confidence 99987655321 1 134556666666 53 33 211 001112256777777888877765
No 83
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.32 E-value=0.095 Score=48.60 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=57.7
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHH-HcCCCEEEEecCCC-CCChhh-hccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAH-EMGIPCVAVYSTID-KDALHV-KLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~-~~G~~vv~v~~~~d-~~~~~~-~~ad-~~~~i~~~~~~~~~~~~~~i~~~a~~~~ 143 (537)
+|+|+|||.| .|.++..+++.+. +.|++|+++..+.+ ...... .... ..+.. +..|.+.+.++.+ +
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~ 73 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEG-------SFQNPGXLEQAVT--N 73 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEEC-------CTTCHHHHHHHHT--T
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEEC-------CCCCHHHHHHHHc--C
Confidence 4567899999 5899999999999 89999999865543 221110 1111 22322 3567777777774 6
Q ss_pred CCEEEeCCCccc-ccHHHHHHHHHCCC
Q 009323 144 CTMLHPGYGFLA-ENAVFVEMCREHGI 169 (537)
Q Consensus 144 ~d~V~p~~g~~s-e~~~~a~~~e~~gi 169 (537)
+|.|+-.-|... +...+.+.+.+.|.
T Consensus 74 ~d~vv~~ag~~n~~~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 74 AEVVFVGAMESGSDMASIVKALSRXNI 100 (221)
T ss_dssp CSEEEESCCCCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCChhHHHHHHHHHhcCC
Confidence 899997655310 12234455556664
No 84
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=95.07 E-value=0.17 Score=44.00 Aligned_cols=102 Identities=17% Similarity=0.132 Sum_probs=65.3
Q ss_pred CcEEEEEcC----cHHHHHHHHHHHHcCCCEEEEecCC--CCC--C-h---hhh---ccCEEEEcCCCCCCCCCCCHHHH
Q 009323 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTI--DKD--A-L---HVK---LADESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 71 ~~kvLi~g~----g~~a~~ii~aa~~~G~~vv~v~~~~--d~~--~-~---~~~---~ad~~~~i~~~~~~~~~~~~~~i 135 (537)
.++|.|+|. |..+..+++.+++.|++++.++... +.. . . ... -+|-.+..- | ......+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~v--p----~~~v~~v 86 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFR--N----SEAAWGV 86 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCS--C----STHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEe--C----HHHHHHH
Confidence 357999998 6789999999999999988885443 100 0 0 011 123333221 1 1334555
Q ss_pred HHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHH
Q 009323 136 LSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIR 180 (537)
Q Consensus 136 ~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~ 180 (537)
++.+.+.++..|+...+. ....+.+.+++.|+.++||+.--+.
T Consensus 87 ~~~~~~~g~~~i~i~~~~--~~~~l~~~a~~~Gi~~igpnc~g~~ 129 (145)
T 2duw_A 87 AQEAIAIGAKTLWLQLGV--INEQAAVLAREAGLSVVMDRCPAIE 129 (145)
T ss_dssp HHHHHHHTCCEEECCTTC--CCHHHHHHHHTTTCEEECSCCHHHH
T ss_pred HHHHHHcCCCEEEEcCCh--HHHHHHHHHHHcCCEEEcCCeeeEE
Confidence 555555788888865443 3567888899999999998754443
No 85
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.05 E-value=0.17 Score=42.74 Aligned_cols=98 Identities=14% Similarity=-0.009 Sum_probs=65.4
Q ss_pred CcEEEEEcCcH----HHHHHHHHHHHcCCCEEEEecCCCCCC---hhhhc-----cCEEEEcCCCCCCCCCCCHHHHHHH
Q 009323 71 QEKILVANRGE----IAVRVIRTAHEMGIPCVAVYSTIDKDA---LHVKL-----ADESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 71 ~~kvLi~g~g~----~a~~ii~aa~~~G~~vv~v~~~~d~~~---~~~~~-----ad~~~~i~~~~~~~~~~~~~~i~~~ 138 (537)
.++|.|+|.+. .+..+++.+++.|++++.|+...+... .+..+ .|-.+..- .......+++-
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~------p~~~v~~~v~e 77 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYI------NPQNQLSEYNY 77 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECS------CHHHHGGGHHH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEe------CHHHHHHHHHH
Confidence 47899999654 589999999999999999965433110 01111 34333221 01223445566
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCH
Q 009323 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNP 176 (537)
Q Consensus 139 a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~ 176 (537)
+.+.++.+|+-..|+ ++.++.+.+++.|++++|+..
T Consensus 78 ~~~~g~k~v~~~~G~--~~~e~~~~a~~~Girvv~nC~ 113 (122)
T 3ff4_A 78 ILSLKPKRVIFNPGT--ENEELEEILSENGIEPVIGCT 113 (122)
T ss_dssp HHHHCCSEEEECTTC--CCHHHHHHHHHTTCEEEESCH
T ss_pred HHhcCCCEEEECCCC--ChHHHHHHHHHcCCeEECCcC
Confidence 666788899887887 567888999999999997443
No 86
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=94.91 E-value=0.11 Score=44.61 Aligned_cols=95 Identities=12% Similarity=0.133 Sum_probs=61.3
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
.++++|+|.|..+..+++.+++. |++++.+.. .++......+....+ +. .+.+.++++++++|.|+-
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d-~~~~~~g~~i~g~pV----------~g-~~~l~~~~~~~~id~vii 71 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFID-DDRKKHKTTMQGITI----------YR-PKYLERLIKKHCISTVLL 71 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEC-SCGGGTTCEETTEEE----------EC-GGGHHHHHHHHTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEE-CCcccCCCEecCeEE----------EC-HHHHHHHHHHCCCCEEEE
Confidence 46899999999999999999886 888887653 222211112223222 12 446777888889998886
Q ss_pred CCCcccc--cHHHHHHHHHCCCce-eCCCHH
Q 009323 150 GYGFLAE--NAVFVEMCREHGINF-IGPNPD 177 (537)
Q Consensus 150 ~~g~~se--~~~~a~~~e~~gi~~-~Gp~~~ 177 (537)
..+.... ...+...|+..|+.+ +-|+..
T Consensus 72 a~~~~~~~~~~~i~~~l~~~gv~v~~vP~~~ 102 (141)
T 3nkl_A 72 AVPSASQVQKKVIIESLAKLHVEVLTIPNLD 102 (141)
T ss_dssp CCTTSCHHHHHHHHHHHHTTTCEEEECCCHH
T ss_pred eCCCCCHHHHHHHHHHHHHcCCeEEECCCHH
Confidence 6543221 145667788888875 445543
No 87
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.79 E-value=0.14 Score=44.91 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=30.9
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
.++|+|+|.|.++..+++.+++.|++|++++.+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999965543
No 88
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=94.75 E-value=0.22 Score=42.95 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=65.4
Q ss_pred CcEEEEEcC----cHHHHHHHHHHHHcCCCEEEEecCCCCCC---h---hhh---ccCEEEEcCCCCCCCCCCCHHHHHH
Q 009323 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTIDKDA---L---HVK---LADESVCIGEAPSSQSYLLIPNVLS 137 (537)
Q Consensus 71 ~~kvLi~g~----g~~a~~ii~aa~~~G~~vv~v~~~~d~~~---~---~~~---~ad~~~~i~~~~~~~~~~~~~~i~~ 137 (537)
.++|.|+|. |..+..+++.+++.|++++.++...+... . ... -+|-.+..- | .....++++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~v--p----~~~v~~v~~ 87 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVV--P----PKVGLQVAK 87 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECS--C----HHHHHHHHH
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEe--C----HHHHHHHHH
Confidence 468999998 88999999999999999887754322100 0 001 134333221 0 123344554
Q ss_pred HHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHH
Q 009323 138 AAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIR 180 (537)
Q Consensus 138 ~a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~ 180 (537)
.+.+.++..++...+. +..++.+.+++.|++++||+--.+.
T Consensus 88 ~~~~~g~~~i~~~~~~--~~~~l~~~a~~~Gi~~igpnc~g~~ 128 (138)
T 1y81_A 88 EAVEAGFKKLWFQPGA--ESEEIRRFLEKAGVEYSFGRCIMVE 128 (138)
T ss_dssp HHHHTTCCEEEECTTS--CCHHHHHHHHHHTCEEECSCCHHHH
T ss_pred HHHHcCCCEEEEcCcc--HHHHHHHHHHHCCCEEEcCCcceEE
Confidence 4555788888865543 4567888888999999997754443
No 89
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=94.68 E-value=0.24 Score=42.96 Aligned_cols=101 Identities=15% Similarity=0.069 Sum_probs=65.5
Q ss_pred cEEEEEcC----cHHHHHHHHHHHHcCCCEEEEecCCCCCC---h---hhh---ccCEEEEcCCCCCCCCCCCHHHHHHH
Q 009323 72 EKILVANR----GEIAVRVIRTAHEMGIPCVAVYSTIDKDA---L---HVK---LADESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 72 ~kvLi~g~----g~~a~~ii~aa~~~G~~vv~v~~~~d~~~---~---~~~---~ad~~~~i~~~~~~~~~~~~~~i~~~ 138 (537)
++|.|+|. |..+..+++.+++.|++++.+++..+... . ... -.|-.+..- .......+++.
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~v------p~~~~~~vv~~ 96 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFV------KPKLTMEYVEQ 96 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECS------CHHHHHHHHHH
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEe------CHHHHHHHHHH
Confidence 68999998 56899999999999999877754321100 0 011 123333221 01234555666
Q ss_pred HHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHH
Q 009323 139 AISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIR 180 (537)
Q Consensus 139 a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~ 180 (537)
+.+.++.+++-..|+ +..++.+.+++.|++++||+--.+.
T Consensus 97 ~~~~gi~~i~~~~g~--~~~~l~~~a~~~Gi~vvGpnc~gv~ 136 (144)
T 2d59_A 97 AIKKGAKVVWFQYNT--YNREASKKADEAGLIIVANRCMMRE 136 (144)
T ss_dssp HHHHTCSEEEECTTC--CCHHHHHHHHHTTCEEEESCCHHHH
T ss_pred HHHcCCCEEEECCCc--hHHHHHHHHHHcCCEEEcCCchhhc
Confidence 666788888866655 3567888999999999998755443
No 90
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.64 E-value=0.11 Score=48.75 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=49.8
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcC-CCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G-~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~ 143 (537)
...+|||+|||.| .|.++..+++.+.+.| ++|+++..+.+.........-+.+.. +..|.+.+.++.+ +
T Consensus 18 ~~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~ 88 (236)
T 3qvo_A 18 YFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMG-------DVLNHAALKQAMQ--G 88 (236)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEEC-------CTTCHHHHHHHHT--T
T ss_pred eecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEe-------cCCCHHHHHHHhc--C
Confidence 3345678999999 6899999999999999 89988865543221111101122332 3567777777774 6
Q ss_pred CCEEEeCCC
Q 009323 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~p~~g 152 (537)
+|.|+-..+
T Consensus 89 ~D~vv~~a~ 97 (236)
T 3qvo_A 89 QDIVYANLT 97 (236)
T ss_dssp CSEEEEECC
T ss_pred CCEEEEcCC
Confidence 899885443
No 91
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.43 E-value=0.13 Score=51.67 Aligned_cols=76 Identities=14% Similarity=0.051 Sum_probs=49.6
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccC-EEEEcCCCCCCCCCC-CHHHHHHHHHH
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYL-LIPNVLSAAIS 141 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad-~~~~i~~~~~~~~~~-~~~~i~~~a~~ 141 (537)
|..+++|+|||.| .|-+|..+++.+.+. |++|+++....+.......... +.+.. +.. +.+.+.++.+
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~-------Dl~~d~~~~~~~~~- 90 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEG-------DITINKEWVEYHVK- 90 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEEC-------CTTTCHHHHHHHHH-
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeC-------ccCCCHHHHHHHhc-
Confidence 4556678999999 599999999999998 9999999765443222111112 22322 344 6777777775
Q ss_pred cCCCEEEeC
Q 009323 142 RGCTMLHPG 150 (537)
Q Consensus 142 ~~~d~V~p~ 150 (537)
++|.|+-.
T Consensus 91 -~~d~Vih~ 98 (372)
T 3slg_A 91 -KCDVILPL 98 (372)
T ss_dssp -HCSEEEEC
T ss_pred -cCCEEEEc
Confidence 59998854
No 92
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.24 E-value=0.28 Score=47.69 Aligned_cols=91 Identities=15% Similarity=0.215 Sum_probs=58.8
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCC-Chh-h----hc---cCEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALH-V----KL---ADESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~-~~~-~----~~---ad~~~~i~~~~~~~~~~~~~~i~~~a~ 140 (537)
+++|||+|+ |.+|..+++.+.+.|++|+++..+.... .+. . .+ --+.+.. ++.|.+.+.++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~-------D~~d~~~l~~~~~ 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG-------SIDDHASLVEAVK 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECC-------CTTCHHHHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEe-------ccCCHHHHHHHHc
Confidence 468999995 9999999999999999999886543321 011 0 01 1122322 4667788877775
Q ss_pred HcCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc
Q 009323 141 SRGCTMLHPGYGFLA--ENAVFVEMCREHG-IN 170 (537)
Q Consensus 141 ~~~~d~V~p~~g~~s--e~~~~a~~~e~~g-i~ 170 (537)
++|+|+-..+... ....+.+++.+.| +.
T Consensus 77 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 77 --NVDVVISTVGSLQIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp --TCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred --CCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence 5999987655421 1245666777766 53
No 93
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.23 E-value=0.73 Score=45.04 Aligned_cols=119 Identities=15% Similarity=0.224 Sum_probs=74.9
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCC-CCCChh-h-------hccCEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI-DKDALH-V-------KLADESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~-d~~~~~-~-------~~ad~~~~i~~~~~~~~~~~~~~i~~~a~ 140 (537)
+++|||.|+ |.++..+++.+.+.|++|+++..+. +...+. . ..--+.+.. ++.|.+.+.++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~-------D~~d~~~l~~a~~ 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEG-------EMEEHEKMVSVLK 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEe-------cCCCHHHHHHHHc
Confidence 568999994 9999999999999999999987554 211111 0 001133333 4677788877774
Q ss_pred HcCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc-eeCCCH------------HHHHHhcCHHHHHHHHHHCCCCC
Q 009323 141 SRGCTMLHPGYGFLA--ENAVFVEMCREHG-IN-FIGPNP------------DSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 141 ~~~~d~V~p~~g~~s--e~~~~a~~~e~~g-i~-~~Gp~~------------~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
++|+|+-..+... ....+.+++.+.| +. ++ ++. ........|....+++++.|+++
T Consensus 77 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v-~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 148 (321)
T 3c1o_A 77 --QVDIVISALPFPMISSQIHIINAIKAAGNIKRFL-PSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPY 148 (321)
T ss_dssp --TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE-CSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred --CCCEEEECCCccchhhHHHHHHHHHHhCCccEEe-ccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCe
Confidence 5999987655321 1245667777777 53 33 221 00112256788888888888775
No 94
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.22 E-value=0.023 Score=58.76 Aligned_cols=114 Identities=19% Similarity=0.157 Sum_probs=65.2
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~ 151 (537)
++|+|+|.|..+..+++.+++.|+++++++.+++........-...+ .+ +..+.+. ++.+.-.++|+|+...
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi-~G------Dat~~~~-L~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVF-YG------DATRMDL-LESAGAAKAEVLINAI 76 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCE-ES------CTTCHHH-HHHTTTTTCSEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEE-Ec------CCCCHHH-HHhcCCCccCEEEECC
Confidence 57999999999999999999999999999766543222222222223 33 2333333 3333334578877665
Q ss_pred CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 152 GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 152 g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
+-...+......+.+++ |....+....|..... .|.++|+..
T Consensus 77 ~~~~~n~~i~~~ar~~~-----p~~~Iiara~~~~~~~-~L~~~Gad~ 118 (413)
T 3l9w_A 77 DDPQTNLQLTEMVKEHF-----PHLQIIARARDVDHYI-RLRQAGVEK 118 (413)
T ss_dssp SSHHHHHHHHHHHHHHC-----TTCEEEEEESSHHHHH-HHHHTTCSS
T ss_pred CChHHHHHHHHHHHHhC-----CCCeEEEEECCHHHHH-HHHHCCCCE
Confidence 43222333444444432 3333344555555444 345677664
No 95
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=94.08 E-value=0.16 Score=44.03 Aligned_cols=103 Identities=15% Similarity=0.072 Sum_probs=65.2
Q ss_pred CcEEEEEcC----cHHHHHHHHHHHHcCCCEEEEecC--CCCC---Chhh---h---ccCEEEEcCCCCCCCCCCCHHHH
Q 009323 71 QEKILVANR----GEIAVRVIRTAHEMGIPCVAVYST--IDKD---ALHV---K---LADESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 71 ~~kvLi~g~----g~~a~~ii~aa~~~G~~vv~v~~~--~d~~---~~~~---~---~ad~~~~i~~~~~~~~~~~~~~i 135 (537)
.++|.|+|. |..+..+++.+++.|++++.++.. .+.. ..+. . -.|-.+..-+ ......+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp------~~~~~~v 86 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRP------PSALMDH 86 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSC------HHHHTTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeC------HHHHHHH
Confidence 468999997 578999999999999998888554 2210 0000 1 1233332211 1122334
Q ss_pred HHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHH
Q 009323 136 LSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRI 181 (537)
Q Consensus 136 ~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~ 181 (537)
++.+.+.++..|+...|+ +..++.+.+++.|++++||+--.+..
T Consensus 87 ~~~~~~~gi~~i~~~~g~--~~~~~~~~a~~~Gir~vgpnc~g~~~ 130 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGI--RHPEFEKALKEAGIPVVADRCLMVEH 130 (140)
T ss_dssp HHHHHHHCCSCEEECTTC--CCHHHHHHHHHTTCCEEESCCHHHHH
T ss_pred HHHHHHcCCCEEEEcCCc--CHHHHHHHHHHcCCEEEcCCccceEC
Confidence 444555678878776666 35678889999999999987554443
No 96
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=93.86 E-value=0.25 Score=49.79 Aligned_cols=83 Identities=7% Similarity=-0.131 Sum_probs=51.3
Q ss_pred CCCcCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCC--hhhhcc---------C-EEEEcCCCCCCCCC
Q 009323 63 GALKVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDA--LHVKLA---------D-ESVCIGEAPSSQSY 129 (537)
Q Consensus 63 ~~~~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~--~~~~~a---------d-~~~~i~~~~~~~~~ 129 (537)
...+...|+|+|||.| .|.++..+++.+.+.|++|++++...+... ....+. . +.+.. +.
T Consensus 16 ~~~~~~~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------Dl 88 (375)
T 1t2a_A 16 NKYFQGHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG-------DL 88 (375)
T ss_dssp --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEEC-------CT
T ss_pred chhhHhhcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEc-------cC
Confidence 3456666668999999 589999999999999999999875543210 011110 1 12222 35
Q ss_pred CCHHHHHHHHHHcCCCEEEeCCC
Q 009323 130 LLIPNVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 130 ~~~~~i~~~a~~~~~d~V~p~~g 152 (537)
.+.+.+.++++..++|.|+-.-+
T Consensus 89 ~d~~~~~~~~~~~~~d~vih~A~ 111 (375)
T 1t2a_A 89 TDSTCLVKIINEVKPTEIYNLGA 111 (375)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCS
T ss_pred CCHHHHHHHHHhcCCCEEEECCC
Confidence 67778888877767899886544
No 97
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.79 E-value=0.47 Score=46.29 Aligned_cols=70 Identities=14% Similarity=0.146 Sum_probs=46.4
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|+|+|||.| .|-+|..+++.+.+.|++|+++........ .. .-+.+.. +.. .+.+.++.+ ++|.|+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-~~~~~~~-------Dl~-~~~~~~~~~--~~d~Vi 67 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-DYEYRVS-------DYT-LEDLINQLN--DVDAVV 67 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEEC-------CCC-HHHHHHHTT--TCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-ceEEEEc-------ccc-HHHHHHhhc--CCCEEE
Confidence 568999999 699999999999999999999876522211 11 1123332 244 566666664 799988
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-+
T Consensus 68 h~a~ 71 (311)
T 3m2p_A 68 HLAA 71 (311)
T ss_dssp ECCC
T ss_pred Eccc
Confidence 6543
No 98
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.76 E-value=0.15 Score=44.52 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=53.5
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCC--Chhhhcc-CEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD--ALHVKLA-DESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~--~~~~~~a-d~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
.++|+|+|.|..+..+++.+.+.|+++++++.++... ....... +..+..+ +..+.+.+.+. .-.++|+|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~g------d~~~~~~l~~a-~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPG------DSNDSSVLKKA-GIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEES------CTTSHHHHHHH-TTTTCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEc------CCCCHHHHHHc-ChhhCCEE
Confidence 4689999999999999999999999999996542100 0111111 2223233 23454544443 23578999
Q ss_pred EeCCCcccccHHHHHHHHHC
Q 009323 148 HPGYGFLAENAVFVEMCREH 167 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~ 167 (537)
+...+....+......+.+.
T Consensus 76 i~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 76 LALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EECSSCHHHHHHHHHHHHHH
T ss_pred EEecCChHHHHHHHHHHHHH
Confidence 97765433344444444443
No 99
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.71 E-value=0.097 Score=48.70 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=64.7
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~ 151 (537)
+||+|+|.|..+..+++.+.+.|+++++++.+++.........+..+..+ +..+.+.+.++ .-.++|.|+...
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~g------d~~~~~~l~~a-~i~~ad~vi~~~ 73 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHG------DGSHKEILRDA-EVSKNDVVVILT 73 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEES------CTTSHHHHHHH-TCCTTCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEc------CCCCHHHHHhc-CcccCCEEEEec
Confidence 37999999999999999999999999999654432211111122233333 23444444433 335789999776
Q ss_pred CcccccHHHHHHHHH-CCCceeCCCHHHHHHhcCHHHHHHHHHHCCCC
Q 009323 152 GFLAENAVFVEMCRE-HGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 152 g~~se~~~~a~~~e~-~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gip 198 (537)
+....+......+.. .+.. ..+....|... .+.++++|+.
T Consensus 74 ~~d~~n~~~~~~a~~~~~~~------~iia~~~~~~~-~~~l~~~G~d 114 (218)
T 3l4b_C 74 PRDEVNLFIAQLVMKDFGVK------RVVSLVNDPGN-MEIFKKMGIT 114 (218)
T ss_dssp SCHHHHHHHHHHHHHTSCCC------EEEECCCSGGG-HHHHHHHTCE
T ss_pred CCcHHHHHHHHHHHHHcCCC------eEEEEEeCcch-HHHHHHCCCC
Confidence 544344444444444 3322 11223333333 2356777765
No 100
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.69 E-value=0.4 Score=46.53 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=58.4
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCC-CCCCh-h-h----h---ccCEEEEcCCCCCCCCCCCHHHHHHHH
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI-DKDAL-H-V----K---LADESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~-d~~~~-~-~----~---~ad~~~~i~~~~~~~~~~~~~~i~~~a 139 (537)
+++|||.|+ |.+|..+++++.+.|++|+++..+. ....+ . . . .--+.+.. ++.|.+.+.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~-------D~~d~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEG-------DINDHETLVKAI 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEEC-------CTTCHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEe-------CCCCHHHHHHHH
Confidence 468999995 9999999999999999999886554 11111 0 0 0 11133333 366777887777
Q ss_pred HHcCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc
Q 009323 140 ISRGCTMLHPGYGFLA--ENAVFVEMCREHG-IN 170 (537)
Q Consensus 140 ~~~~~d~V~p~~g~~s--e~~~~a~~~e~~g-i~ 170 (537)
+ ++|+|+-..+... ....+.+++.+.| +.
T Consensus 75 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 106 (307)
T 2gas_A 75 K--QVDIVICAAGRLLIEDQVKIIKAIKEAGNVK 106 (307)
T ss_dssp T--TCSEEEECSSSSCGGGHHHHHHHHHHHCCCS
T ss_pred h--CCCEEEECCcccccccHHHHHHHHHhcCCce
Confidence 4 6999987654321 1134566666666 53
No 101
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.41 E-value=0.59 Score=45.47 Aligned_cols=91 Identities=14% Similarity=0.188 Sum_probs=59.0
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-----hc--cC-EEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-----KL--AD-ESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-----~~--ad-~~~~i~~~~~~~~~~~~~~i~~~a~~ 141 (537)
+++|||.| .|.++..+++.+.+.|++|+++..+.....+.. .+ .. +.+.. ++.|.+.+.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~l~~~~~- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA-------SLDDHQRLVDALK- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECC-------CSSCHHHHHHHHT-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeC-------CCCCHHHHHHHHh-
Confidence 46899999 599999999999999999999865433211110 01 11 22222 4677788877774
Q ss_pred cCCCEEEeCCCccc-----c-cHHHHHHHHHCC-Cc
Q 009323 142 RGCTMLHPGYGFLA-----E-NAVFVEMCREHG-IN 170 (537)
Q Consensus 142 ~~~d~V~p~~g~~s-----e-~~~~a~~~e~~g-i~ 170 (537)
++|+|+-..+... . ...+.+++.+.| +.
T Consensus 76 -~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 76 -QVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp -TCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred -CCCEEEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 6999987654331 1 135667777777 53
No 102
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=92.85 E-value=0.36 Score=47.43 Aligned_cols=73 Identities=10% Similarity=0.016 Sum_probs=50.4
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA--DESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~a--d~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
||+|||.| .|-++..+++.+.+.|++|++++....... ..+. -+.+.. +..+.+.+.++.++.++|.|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~d~v 71 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYNG-------DLRDKAFLRDVFTQENIEAV 71 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEEC-------CTTCHHHHHHHHHHSCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEEC-------CCCCHHHHHHHHhhcCCCEE
Confidence 36899998 599999999999999999999864433211 1111 123332 35677778777776689998
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-.-+
T Consensus 72 ih~a~ 76 (330)
T 2c20_A 72 MHFAA 76 (330)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 86544
No 103
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=92.79 E-value=0.93 Score=43.07 Aligned_cols=92 Identities=14% Similarity=0.114 Sum_probs=55.3
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc-CCCEEEEecCCCCCChhh-hccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 73 KILVANR-GEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 73 kvLi~g~-g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~-~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
||+|+|. |.++..+++.+.+. |++++.+....+...... .-+|-.+.+. ........+..|.+.+.+.|+-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT------~p~a~~~~~~~a~~~g~~~Vig 75 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFT------HPDVVMGNLEFLIDNGIHAVVG 75 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECS------CTTTHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEcc------ChHHHHHHHHHHHHcCCCEEEc
Confidence 8999995 99999999999876 899887653222111111 1356444332 1233456667777788888886
Q ss_pred CCCccccc-HHHHHHHHHC-CCc
Q 009323 150 GYGFLAEN-AVFVEMCREH-GIN 170 (537)
Q Consensus 150 ~~g~~se~-~~~a~~~e~~-gi~ 170 (537)
..|+..|. ..+.+++++. +++
T Consensus 76 TTG~~~e~~~~l~~aa~~~~~~~ 98 (245)
T 1p9l_A 76 TTGFTAERFQQVESWLVAKPNTS 98 (245)
T ss_dssp CCCCCHHHHHHHHHHHHTSTTCE
T ss_pred CCCCCHHHHHHHHHHHHhCCCCC
Confidence 66654442 2333444433 554
No 104
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=92.69 E-value=0.94 Score=44.74 Aligned_cols=76 Identities=12% Similarity=-0.026 Sum_probs=50.1
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEecCCCCCCh-hh-hc---cC-EEEEcCCCCCCCCCCCHHHHHHHHH
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMG--IPCVAVYSTIDKDAL-HV-KL---AD-ESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G--~~vv~v~~~~d~~~~-~~-~~---ad-~~~~i~~~~~~~~~~~~~~i~~~a~ 140 (537)
++|+|||.|+ |-+|..+++.+.+.| +++++++........ .. .+ .. +.+.. +..+.+.+.++++
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~ 95 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKG-------EIQNGELLEHVIK 95 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHHH
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEc-------CCCCHHHHHHHHh
Confidence 3578999995 999999999999999 666666543211111 00 01 11 22322 3677888888888
Q ss_pred HcCCCEEEeCCC
Q 009323 141 SRGCTMLHPGYG 152 (537)
Q Consensus 141 ~~~~d~V~p~~g 152 (537)
..++|.|+-.-+
T Consensus 96 ~~~~d~Vih~A~ 107 (346)
T 4egb_A 96 ERDVQVIVNFAA 107 (346)
T ss_dssp HHTCCEEEECCC
T ss_pred hcCCCEEEECCc
Confidence 878999986543
No 105
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=92.65 E-value=0.29 Score=47.70 Aligned_cols=74 Identities=12% Similarity=0.054 Sum_probs=51.9
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHc--CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
|.|+|||.|+ |-++..+++.+.+. |++|++++........ .. .-+.+.. +..+.+.+.++.++.++|+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~-~~~~~~~-------D~~d~~~~~~~~~~~~~d~ 71 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV-VN-SGPFEVV-------NALDFNQIEHLVEVHKITD 71 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHH-HH-SSCEEEC-------CTTCHHHHHHHHHHTTCCE
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccc-cC-CCceEEe-------cCCCHHHHHHHHhhcCCCE
Confidence 4578999995 99999999999998 8999998754433111 11 1123333 3567788888887778999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-.-+
T Consensus 72 vih~a~ 77 (312)
T 2yy7_A 72 IYLMAA 77 (312)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886543
No 106
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.34 E-value=0.8 Score=44.29 Aligned_cols=73 Identities=19% Similarity=0.006 Sum_probs=49.7
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcC-CCEEEEecCCCCCC-hhhh-ccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTIDKDA-LHVK-LADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G-~~vv~v~~~~d~~~-~~~~-~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
.|+|||.|+ |.++..+++.+.+.| ++|+++..+++... .... ..-+.+.. ++.|.+.+.++.+ ++|.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~-------D~~d~~~l~~~~~--~~d~ 75 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQG-------DQDDQVIMELALN--GAYA 75 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEEC-------CTTCHHHHHHHHT--TCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEe-------cCCCHHHHHHHHh--cCCE
Confidence 478999995 999999999999999 99999875543211 0001 11133333 3667778777764 6999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..+
T Consensus 76 vi~~a~ 81 (299)
T 2wm3_A 76 TFIVTN 81 (299)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 986654
No 107
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.32 E-value=0.35 Score=44.74 Aligned_cols=72 Identities=15% Similarity=0.190 Sum_probs=48.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
||+|||.| .|.+|..+++.+.+.|++|+++..+.+..... . ..-.+.. -+..|.+.+.++.+ ++|+|+-
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~-~~~~~~~------~Dl~d~~~~~~~~~--~~d~vi~ 73 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-N-EHLKVKK------ADVSSLDEVCEVCK--GADAVIS 73 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-C-TTEEEEC------CCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-c-CceEEEE------ecCCCHHHHHHHhc--CCCEEEE
Confidence 47999999 58899999999999999999996543322111 0 1111211 14567788877775 6999885
Q ss_pred CCC
Q 009323 150 GYG 152 (537)
Q Consensus 150 ~~g 152 (537)
..|
T Consensus 74 ~a~ 76 (227)
T 3dhn_A 74 AFN 76 (227)
T ss_dssp CCC
T ss_pred eCc
Confidence 443
No 108
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.16 E-value=0.16 Score=45.73 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=30.3
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~ 104 (537)
.++|+|+|.|.++..+++.+++. |++|++++.++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45899999999999999999999 99999996544
No 109
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=92.04 E-value=0.61 Score=46.91 Aligned_cols=76 Identities=4% Similarity=-0.188 Sum_probs=50.9
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCC--hhhhcc---------C-EEEEcCCCCCCCCCCCHHHHH
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDA--LHVKLA---------D-ESVCIGEAPSSQSYLLIPNVL 136 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~--~~~~~a---------d-~~~~i~~~~~~~~~~~~~~i~ 136 (537)
|+|+|||.|+ |.+|..+++.+.+.|++|+++........ ....+. . +.+.. +..+.+.+.
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~ 99 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYA-------DLTDASSLR 99 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEEC-------CTTCHHHHH
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEEC-------CCCCHHHHH
Confidence 4589999995 99999999999999999999875443210 001111 1 12222 356777788
Q ss_pred HHHHHcCCCEEEeCCC
Q 009323 137 SAAISRGCTMLHPGYG 152 (537)
Q Consensus 137 ~~a~~~~~d~V~p~~g 152 (537)
++++..++|.|+-.-+
T Consensus 100 ~~~~~~~~d~Vih~A~ 115 (381)
T 1n7h_A 100 RWIDVIKPDEVYNLAA 115 (381)
T ss_dssp HHHHHHCCSEEEECCS
T ss_pred HHHHhcCCCEEEECCc
Confidence 8777767899886544
No 110
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=92.03 E-value=0.35 Score=46.49 Aligned_cols=59 Identities=7% Similarity=0.048 Sum_probs=46.7
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
+||||.| .|-+|..+++.+.+.|++|+++... .-+..+.+.+.++.+..++|.|+-.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~vi~~ 63 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHIIIHC 63 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEEEEC
Confidence 3999999 5999999999999999999998530 0135577788888887789999865
Q ss_pred CC
Q 009323 151 YG 152 (537)
Q Consensus 151 ~g 152 (537)
-+
T Consensus 64 a~ 65 (287)
T 3sc6_A 64 AA 65 (287)
T ss_dssp CC
T ss_pred Cc
Confidence 44
No 111
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.01 E-value=0.65 Score=46.85 Aligned_cols=73 Identities=18% Similarity=0.144 Sum_probs=49.3
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
+|+|||.|+ |.++..+++.+.+.|++|+++..............-+.+.. +..+.+.+.++++ ++|+|+-
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~-------Dl~d~~~~~~~~~--~~d~Vih 99 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLV-------DLRVMENCLKVTE--GVDHVFN 99 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEEC-------CTTSHHHHHHHHT--TCSEEEE
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEEC-------CCCCHHHHHHHhC--CCCEEEE
Confidence 579999995 89999999999999999999875543322111111133333 3556677777663 7998886
Q ss_pred CCC
Q 009323 150 GYG 152 (537)
Q Consensus 150 ~~g 152 (537)
.-+
T Consensus 100 ~A~ 102 (379)
T 2c5a_A 100 LAA 102 (379)
T ss_dssp CCC
T ss_pred Cce
Confidence 544
No 112
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.00 E-value=0.25 Score=47.51 Aligned_cols=36 Identities=14% Similarity=0.079 Sum_probs=30.8
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||||.|.|-+|..+++.+.+.|++|+++..+.
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 356899999999999999999999999999986543
No 113
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=91.91 E-value=0.61 Score=45.83 Aligned_cols=78 Identities=14% Similarity=0.033 Sum_probs=50.7
Q ss_pred CCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCC-hhh-hc---cC-EEEEcCCCCCCCCCCCHHHHHHHHH
Q 009323 68 TCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDA-LHV-KL---AD-ESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 68 ~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~-~~~-~~---ad-~~~~i~~~~~~~~~~~~~~i~~~a~ 140 (537)
..+.++|||.| .|.+|..+++.+.+.|++|+++........ ... .+ .. +.+.. +..+.+.+.++++
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~ 83 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDG-------DMADACSVQRAVI 83 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEEC-------CTTCHHHHHHHHH
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEEC-------CCCCHHHHHHHHH
Confidence 34578999999 588999999999999999999875443211 001 11 11 22322 3567778888877
Q ss_pred HcCCCEEEeCCC
Q 009323 141 SRGCTMLHPGYG 152 (537)
Q Consensus 141 ~~~~d~V~p~~g 152 (537)
..++|+|+-.-+
T Consensus 84 ~~~~d~Vih~A~ 95 (335)
T 1rpn_A 84 KAQPQEVYNLAA 95 (335)
T ss_dssp HHCCSEEEECCS
T ss_pred HcCCCEEEECcc
Confidence 768899886543
No 114
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.89 E-value=0.19 Score=47.11 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=29.5
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.++|||+|+|+.|.+.++.+.+.|.+++++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 47899999999999999999999999999953
No 115
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.80 E-value=0.26 Score=41.64 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=29.1
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
++|+|+|.|.++..+++.+.+.|+++++++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 58999999999999999999999999988644
No 116
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=91.79 E-value=0.66 Score=46.72 Aligned_cols=101 Identities=12% Similarity=-0.006 Sum_probs=54.3
Q ss_pred CCcEEEEEcCcHH-----HHHHHHHHHHcCCCEEEEecCCCCCChhhhccC-EEEEcCCCCC-----CCCCCC-------
Q 009323 70 RQEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPS-----SQSYLL------- 131 (537)
Q Consensus 70 ~~~kvLi~g~g~~-----a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad-~~~~i~~~~~-----~~~~~~------- 131 (537)
|.+||||+++|.- +..+++++++.|++|..+.+...........+. +...++.... .+....
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 6689999998753 678999999999999988643321111111111 1222321110 000111
Q ss_pred HHHHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCcee
Q 009323 132 IPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 132 ~~~i~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
.....++.++.++|+|+...|+.+-- ..-++...|+|++
T Consensus 81 ~~~~~~~l~~~~PDvVi~~g~~~s~p--~~laA~~~~iP~v 119 (365)
T 3s2u_A 81 LFQALRVIRQLRPVCVLGLGGYVTGP--GGLAARLNGVPLV 119 (365)
T ss_dssp HHHHHHHHHHHCCSEEEECSSSTHHH--HHHHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCcchHH--HHHHHHHcCCCEE
Confidence 12334567889999999765553322 2223456788765
No 117
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.77 E-value=0.17 Score=48.91 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=31.3
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
+|||||.|.|-+|..+++.+.+.|++|+++....+
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 57899999999999999999999999999976544
No 118
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=91.76 E-value=0.4 Score=51.84 Aligned_cols=120 Identities=15% Similarity=0.121 Sum_probs=73.9
Q ss_pred HHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCC-CC-CCCCcCccCCCHHHHHHHHHHhCCcEEEEecCCCCCcc
Q 009323 159 VFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAG-VP-TVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRG 236 (537)
Q Consensus 159 ~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~G-ip-vp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~G 236 (537)
.+.+++++.++.++.|....+ +.||..+.-+.+..- -| .++++ ...+.+ + ..- .+|+||..|..|.|
T Consensus 474 ~ll~~l~~~~v~iieP~~~~l--lsNKailalLw~l~p~hp~LLpT~--f~~~~~-l----~~~--~yV~KPi~gReG~n 542 (619)
T 2io8_A 474 RLIDVLLRPEVLVFEPLWTVI--PGNKAILPILWSLFPHHRYLLDTD--FTVNDE-L----VKT--GYAVKPIAGRCGSN 542 (619)
T ss_dssp CHHHHHTCTTCEEESCGGGGT--TTSTTHHHHHHHHSTTCTTCCCEE--SSCCHH-H----HHH--CEEEEETTCCTTTT
T ss_pred HHHHHHHhCCCEEECHHHHHH--hhhHHHHHHHHHhCCCCCCCCCee--ecCCcc-c----ccC--CEEEccCCCCCCCC
Confidence 467778788899997665544 999999997777541 11 22542 223332 2 222 48999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHHHHHhcCCCcEEEEeccCCC----cEEEEEEEEeCCCcEEEEeeee
Q 009323 237 MRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNP----RHIEFQVLADKYGNVVHFGERD 297 (537)
Q Consensus 237 v~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I~g~----~e~~v~v~~d~~g~v~~~~~r~ 297 (537)
|.+++..++. ++ .....++...++.|+|++=+ .+..+-++.- .|+...++.|.
T Consensus 543 V~i~~~~~~~---~~----~~~~~y~~~~~IyQe~~~lp~~d~~~~~iG~f~v-gg~~aG~~~R~ 599 (619)
T 2io8_A 543 IDLVSHHEEV---LD----KTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTV-GGNYGGTCLRG 599 (619)
T ss_dssp CEEECTTSCE---EE----ECCCTTTTSCEEEEECCCCCEETTEEEEEEEEEE-TTEEEEEEEEE
T ss_pred EEEEeCCChh---Hh----hccccccCCCeEEEEecCCCCcCCcceEEEEEEE-CCEEEEEEEec
Confidence 9999762221 00 11122445789999999863 2233444443 34666666664
No 119
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=91.71 E-value=0.45 Score=48.88 Aligned_cols=124 Identities=12% Similarity=0.084 Sum_probs=75.0
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCC---CEEEEecCCCCCCh-hhhcc------CEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGI---PCVAVYSTIDKDAL-HVKLA------DESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~---~vv~v~~~~d~~~~-~~~~a------d~~~~i~~~~~~~~~~~~~~i~~~a~ 140 (537)
|+||+|+|.|.++..+++.+.+.|. .+++++.+.+.... ...+. -..+.+ +..+.+.+.++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~-------D~~d~~~l~~~l~ 73 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTV-------DADSIEELVALIN 73 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEEC-------CTTCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEe-------cCCCHHHHHHHHH
Confidence 3689999999999999999999983 66666543321110 01111 122333 2456778888887
Q ss_pred HcCCCEEEeCCCcccccHHHHHHHHHCCCceeCC-CHHHH--HH--hcCHHHHHHHHHHCCCCCCCC
Q 009323 141 SRGCTMLHPGYGFLAENAVFVEMCREHGINFIGP-NPDSI--RI--MGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 141 ~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp-~~~~i--~~--~~dK~~~r~~l~~~Gipvp~~ 202 (537)
+.++|+|+...+.. ....+.+.+.+.|..++-. +.... .. ......+.+.++++|+.....
T Consensus 74 ~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g 139 (405)
T 4ina_A 74 EVKPQIVLNIALPY-QDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLG 139 (405)
T ss_dssp HHCCSEEEECSCGG-GHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEEC
T ss_pred hhCCCEEEECCCcc-cChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEc
Confidence 77899999776543 2456777788888887611 11000 00 001125666778888886554
No 120
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=91.51 E-value=1 Score=43.23 Aligned_cols=72 Identities=10% Similarity=-0.012 Sum_probs=49.7
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
|||||.| .|.+|..+++.+.+. |++|+++..+.+.........-+.+.. ++.|.+.+.++.+ ++|.|+-
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~-------D~~d~~~l~~~~~--~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQL-------DYFNQESMVEAFK--GMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEEC-------CTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEc-------CCCCHHHHHHHHh--CCCEEEE
Confidence 3699999 589999999999998 999999976544322111112233433 3677777777764 6999986
Q ss_pred CCC
Q 009323 150 GYG 152 (537)
Q Consensus 150 ~~g 152 (537)
..+
T Consensus 72 ~a~ 74 (289)
T 3e48_A 72 IPS 74 (289)
T ss_dssp CCC
T ss_pred eCC
Confidence 644
No 121
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=91.50 E-value=0.73 Score=45.42 Aligned_cols=75 Identities=11% Similarity=-0.046 Sum_probs=52.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-c------cCEEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L------ADESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-~------ad~~~~i~~~~~~~~~~~~~~i~~~a~~~ 142 (537)
.|+|||.| .|-++..+++.+.+.|++|++++........... + .-+.+.. +..+.+.+.++++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~ 77 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHET-------DVSDERALARIFDAH 77 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECC-------CTTCHHHHHHHHHHS
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEe-------ecCCHHHHHHHHhcc
Confidence 46899999 5889999999999999999998654433221111 0 1122222 356788888888877
Q ss_pred CCCEEEeCCC
Q 009323 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~p~~g 152 (537)
++|.|+-.-+
T Consensus 78 ~~d~vih~A~ 87 (341)
T 3enk_A 78 PITAAIHFAA 87 (341)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECcc
Confidence 8999886544
No 122
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=91.44 E-value=1.5 Score=43.08 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=61.4
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHH-----HHcCC
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAA-----ISRGC 144 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a-----~~~~~ 144 (537)
|.||.|+|. |.++...++++++.+.+++++.. .+... ...+.. + +...-|.+.+++++.+ ....+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d-~~~~~--~~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLD-PATNV--GLVDSF-F-----PEAEFFTEPEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEEC-SSCCC--GGGGGT-C-----TTCEEESCHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEc-CCHHH--HHHHhh-C-----CCCceeCCHHHHHHHhhhhcccCCCC
Confidence 469999998 67999999999999999888763 33222 111111 1 1223367788887655 35679
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCceeC
Q 009323 145 TMLHPGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 145 d~V~p~~g~~se~~~~a~~~e~~gi~~~G 173 (537)
|+|+-..-. ......+..+.+.|..++.
T Consensus 74 D~V~I~tP~-~~H~~~~~~al~aGkhVl~ 101 (312)
T 3o9z_A 74 DYLSIASPN-HLHYPQIRMALRLGANALS 101 (312)
T ss_dssp SEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred cEEEECCCc-hhhHHHHHHHHHCCCeEEE
Confidence 999865421 2346677777788887763
No 123
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=91.43 E-value=0.44 Score=47.17 Aligned_cols=76 Identities=16% Similarity=0.046 Sum_probs=51.0
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCC------CChhh-hc----cC--EEEEcCCCCCCCCCCCHHHH
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDK------DALHV-KL----AD--ESVCIGEAPSSQSYLLIPNV 135 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~------~~~~~-~~----ad--~~~~i~~~~~~~~~~~~~~i 135 (537)
|.|+|||.| .|-++..+++.+.+.|++|++++..... ..... .+ .. +.+.. +..+.+.+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-------D~~~~~~~ 73 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEM-------DILDQGAL 73 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEEC-------CTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEEC-------CCCCHHHH
Confidence 467999999 5999999999999999999998643321 11100 01 11 23332 35667777
Q ss_pred HHHHHHcCCCEEEeCCC
Q 009323 136 LSAAISRGCTMLHPGYG 152 (537)
Q Consensus 136 ~~~a~~~~~d~V~p~~g 152 (537)
.++++..++|.|+-.-+
T Consensus 74 ~~~~~~~~~d~vih~A~ 90 (348)
T 1ek6_A 74 QRLFKKYSFMAVIHFAG 90 (348)
T ss_dssp HHHHHHCCEEEEEECCS
T ss_pred HHHHHhcCCCEEEECCC
Confidence 77777668998886544
No 124
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=91.39 E-value=0.41 Score=45.93 Aligned_cols=72 Identities=18% Similarity=0.112 Sum_probs=48.1
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHc--CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 72 EKILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|+|||.|+ |.++..+++.+.+. |++|+++..+.+.........-+.+.. +..|.+.+.++.+ ++|.|+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~-------D~~d~~~l~~~~~--~~d~vi 71 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHG-------DYNQPESLQKAFA--GVSKLL 71 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEEC-------CTTCHHHHHHHTT--TCSEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEe-------ccCCHHHHHHHHh--cCCEEE
Confidence 47999995 99999999999998 999999875543221101111133332 3667777777764 689888
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-+
T Consensus 72 ~~a~ 75 (287)
T 2jl1_A 72 FISG 75 (287)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 5543
No 125
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=91.14 E-value=0.99 Score=44.47 Aligned_cols=75 Identities=15% Similarity=0.011 Sum_probs=50.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-ccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-~ad-~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
+|+|||.| .|.+|..+++.+.+.|++|+++............ +.. +.+.. +..+.+.+.++++..++|+|
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEG-------SIADHALVNQLIGDLQPDAV 93 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEEC-------CTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEE-------eCCCHHHHHHHHhccCCcEE
Confidence 57899999 6899999999999999999998654332111111 111 12322 35677777777776679999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-.-+
T Consensus 94 ih~A~ 98 (333)
T 2q1w_A 94 VHTAA 98 (333)
T ss_dssp EECCC
T ss_pred EECce
Confidence 86544
No 126
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=90.80 E-value=0.81 Score=45.04 Aligned_cols=71 Identities=15% Similarity=0.014 Sum_probs=47.1
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
++|||.| .|.+|..+++.+.+.|++|+++..+.+.........-+.+.. +..+.+.+.++.+ ++|.|+-.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~-------Dl~d~~~~~~~~~--~~d~vih~ 84 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVA-------EMLDHAGLERALR--GLDGVIFS 84 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEEC-------CTTCHHHHHHHTT--TCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEe-------cCCCHHHHHHHHc--CCCEEEEC
Confidence 4899999 599999999999999999999875543221101001123332 3566777777664 69988854
Q ss_pred C
Q 009323 151 Y 151 (537)
Q Consensus 151 ~ 151 (537)
-
T Consensus 85 a 85 (342)
T 2x4g_A 85 A 85 (342)
T ss_dssp -
T ss_pred C
Confidence 3
No 127
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.76 E-value=0.64 Score=46.00 Aligned_cols=67 Identities=16% Similarity=0.070 Sum_probs=47.1
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
..|+|||.|+ |-+|..+++.+.+.|++|++++..... . .-+.+.. +..+.+.+.++++ ++|+|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~-~~~~~~~-------Dl~d~~~~~~~~~--~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----T-GGEEVVG-------SLEDGQALSDAIM--GVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----S-CCSEEES-------CTTCHHHHHHHHT--TCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----C-CccEEec-------CcCCHHHHHHHHh--CCCEEE
Confidence 3678999995 999999999999999999999755433 0 1122332 3567777777775 799988
Q ss_pred eCC
Q 009323 149 PGY 151 (537)
Q Consensus 149 p~~ 151 (537)
-.-
T Consensus 83 h~A 85 (347)
T 4id9_A 83 HLG 85 (347)
T ss_dssp ECC
T ss_pred ECC
Confidence 553
No 128
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.48 E-value=0.57 Score=46.46 Aligned_cols=73 Identities=5% Similarity=0.019 Sum_probs=50.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-c---------cC-EEEEcCCCCCCCCCCCHHHHHHH
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L---------AD-ESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-~---------ad-~~~~i~~~~~~~~~~~~~~i~~~ 138 (537)
+|+|||.| .|-+|..+++.+.+.|++|+++............ + .. +.+.. +..+.+.+.++
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 97 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG-------DIRDLTTCEQV 97 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEEC-------CTTCHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEc-------cCCCHHHHHHH
Confidence 57999999 5899999999999999999998754432221111 0 11 23332 35677777777
Q ss_pred HHHcCCCEEEeCCC
Q 009323 139 AISRGCTMLHPGYG 152 (537)
Q Consensus 139 a~~~~~d~V~p~~g 152 (537)
++ ++|.|+-.-+
T Consensus 98 ~~--~~d~Vih~A~ 109 (351)
T 3ruf_A 98 MK--GVDHVLHQAA 109 (351)
T ss_dssp TT--TCSEEEECCC
T ss_pred hc--CCCEEEECCc
Confidence 65 7999886544
No 129
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=90.44 E-value=0.32 Score=47.52 Aligned_cols=68 Identities=10% Similarity=-0.011 Sum_probs=39.8
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|.|+|||.|+ |.+|..+++.+.+.|++|+++....+. .. .+.. +..+.+.+.++.+..++|.|+
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~-~~~~-------Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------PK-FEQV-------NLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------CC-eEEe-------cCCCHHHHHHHHHhhCCCEEE
Confidence 4579999995 999999999999999999988533221 01 2222 233445555666555799888
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-+
T Consensus 66 h~A~ 69 (315)
T 2ydy_A 66 HCAA 69 (315)
T ss_dssp ECC-
T ss_pred ECCc
Confidence 5443
No 130
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=90.35 E-value=0.47 Score=45.35 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=49.9
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
++|+|||.| .|.++..+++.+.+.|++|++++.+..... ...-+.+.. +..+.+.+.++++ ++|.|+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~-------Dl~d~~~~~~~~~--~~D~vi 69 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQC-------DLADANAVNAMVA--GCDGIV 69 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEEC-------CTTCHHHHHHHHT--TCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEc-------CCCCHHHHHHHHc--CCCEEE
Confidence 357899999 688999999999999999999875544322 111123333 2557777777775 699988
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-|
T Consensus 70 ~~Ag 73 (267)
T 3rft_A 70 HLGG 73 (267)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 6544
No 131
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=90.33 E-value=0.29 Score=51.04 Aligned_cols=71 Identities=20% Similarity=0.295 Sum_probs=49.4
Q ss_pred CCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecCCCCCccEEE--eCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecc
Q 009323 195 AGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRL--AKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYV 272 (537)
Q Consensus 195 ~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~--v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~I 272 (537)
.=++..|+| .+.+.++...+.++.. -+||||+.|.||.|+.+ --+.++.++..+++... ...+++|+++
T Consensus 339 ~il~~VpT~--~c~~~~~~~~vl~~l~-~lViKp~~g~gg~gv~iG~~~s~~e~~~~~~~i~~~------p~~yIaQe~v 409 (474)
T 3n6x_A 339 PILSNVPTY--QLSKADDLKYVLDNLA-ELVVKEVQGSGGYGMLVGPAASKQELEDFRQRILAN------PANYIAQPTL 409 (474)
T ss_dssp CSSEECCCE--ETTSHHHHHHHHHSGG-GEEEEECCCE-----EEGGGCCHHHHHHHHHHHHHS------GGGEEEEECC
T ss_pred hhccCCCce--ecCCHHHHHHHHhchh-heEEEecCCCCCCceEECCcCCHHHHHHHHHHHHhC------CCCEEEeecc
Confidence 445556663 5678888877777665 69999999999999988 45678888887777542 2569999999
Q ss_pred CC
Q 009323 273 QN 274 (537)
Q Consensus 273 ~g 274 (537)
+-
T Consensus 410 ~l 411 (474)
T 3n6x_A 410 AL 411 (474)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 132
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=90.29 E-value=1.3 Score=41.89 Aligned_cols=73 Identities=15% Similarity=0.095 Sum_probs=47.7
Q ss_pred CCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009323 67 VTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (537)
Q Consensus 67 ~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~--- 142 (537)
...|.|++||.| .+.++..+++.+.+.|++|++++.+.+... ...+.++ ..|.+.+.+++++.
T Consensus 18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d-------~~d~~~v~~~~~~~~~~ 84 (251)
T 3orf_A 18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIK-------DSGEEEIKSVIEKINSK 84 (251)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECS-------CSSHHHHHHHHHHHHTT
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEE-------eCCHHHHHHHHHHHHHH
Confidence 345678999999 577999999999999999999876544322 2334442 34555555554442
Q ss_pred --CCCEEEeCCC
Q 009323 143 --GCTMLHPGYG 152 (537)
Q Consensus 143 --~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 85 ~g~iD~li~~Ag 96 (251)
T 3orf_A 85 SIKVDTFVCAAG 96 (251)
T ss_dssp TCCEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 5788886554
No 133
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=90.23 E-value=0.91 Score=41.68 Aligned_cols=69 Identities=10% Similarity=0.112 Sum_probs=48.5
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccC-EEEEcCCCCCCCCCCC-HHHHHHHHHHcCCCEEEe
Q 009323 73 KILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLL-IPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 73 kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad-~~~~i~~~~~~~~~~~-~~~i~~~a~~~~~d~V~p 149 (537)
||||.| .|.++..+++.+.+.|++|+++..+.+..... .. +.+.. +..+ .+.+.++.+ ++|+|+-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~-------D~~d~~~~~~~~~~--~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHF-------DVDWTPEEMAKQLH--GMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEEC-------CTTSCHHHHHTTTT--TCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEe-------cccCCHHHHHHHHc--CCCEEEE
Confidence 899999 68999999999999999999997554322211 11 22332 3556 677776664 6999997
Q ss_pred CCCc
Q 009323 150 GYGF 153 (537)
Q Consensus 150 ~~g~ 153 (537)
.-|.
T Consensus 70 ~ag~ 73 (219)
T 3dqp_A 70 VSGS 73 (219)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 6654
No 134
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.18 E-value=0.51 Score=49.38 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=70.2
Q ss_pred CcCCCCCcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccC----EEEEcCCCCCCCCCCCHHHHHHHH
Q 009323 65 LKVTCRQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 65 ~~~~~~~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad----~~~~i~~~~~~~~~~~~~~i~~~a 139 (537)
-....++++|||+|.|.++..+++.+.+. |+++++++.+.+. ...+++ ..+.+ +..+.+.+.+++
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~k---a~~la~~~~~~~~~~-------D~~d~~~l~~~l 86 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLAN---AQALAKPSGSKAISL-------DVTDDSALDKVL 86 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHH---HHHHHGGGTCEEEEC-------CTTCHHHHHHHH
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHH---HHHHHHhcCCcEEEE-------ecCCHHHHHHHH
Confidence 34444568999999999999999999998 7887777543221 111221 22333 245566666665
Q ss_pred HHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCC
Q 009323 140 ISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 140 ~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~ 202 (537)
. ++|+|+...+... ...+...+.+.|..++-.+... .+...+.+.++++|+.+..+
T Consensus 87 ~--~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd~~~~~----p~~~~Ll~~Ak~aGv~~i~g 142 (467)
T 2axq_A 87 A--DNDVVISLIPYTF-HPNVVKSAIRTKTDVVTSSYIS----PALRELEPEIVKAGITVMNE 142 (467)
T ss_dssp H--TSSEEEECSCGGG-HHHHHHHHHHHTCEEEECSCCC----HHHHHHHHHHHHHTCEEECS
T ss_pred c--CCCEEEECCchhh-hHHHHHHHHhcCCEEEEeecCC----HHHHHHHHHHHHcCCEEEec
Confidence 4 6999998765421 2345555556677665443200 01134445677888876655
No 135
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=90.12 E-value=1 Score=42.60 Aligned_cols=77 Identities=6% Similarity=-0.040 Sum_probs=48.2
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----c
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----R 142 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~-----~ 142 (537)
...|++||.| .+.++..+++.+.+.|++|++++.+.+.......+....+..+ ..+.+.+.+++++ .
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D-------~~~~~~~~~~~~~~~~~~g 76 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVD-------LEDERERVRFVEEAAYALG 76 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECC-------TTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhCCEEEee-------CCCHHHHHHHHHHHHHHcC
Confidence 3357899999 5789999999999999999998755433111111112344432 4455555444433 2
Q ss_pred CCCEEEeCCC
Q 009323 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 77 ~iD~lv~~Ag 86 (256)
T 2d1y_A 77 RVDVLVNNAA 86 (256)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898886544
No 136
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.05 E-value=1.1 Score=43.59 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=29.9
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999 57799999999999999999886543
No 137
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=90.00 E-value=1.2 Score=41.22 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
+.+|++||+|+|..+..+++.+++.||+++.+-
T Consensus 10 ~~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfi 42 (220)
T 4ea9_A 10 LAIGGVVIIGGGGHAKVVIESLRACGETVAAIV 42 (220)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEE
Confidence 346789999999999999999999999988764
No 138
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=89.83 E-value=1.2 Score=43.32 Aligned_cols=72 Identities=8% Similarity=0.022 Sum_probs=50.6
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
.+++|||.| .|.+|..+++.+.+.|++|+++...... .. +.-+.+.. +..+.+.+.++.+..++|.|+
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~-------Dl~d~~~~~~~~~~~~~d~vi 79 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISL-------DIMDSQRVKKVISDIKPDYIF 79 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEEC-------CTTCHHHHHHHHHHHCCSEEE
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEEC-------CCCCHHHHHHHHHhcCCCEEE
Confidence 357899999 5889999999999999999998755443 11 11122322 356777888877766799988
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-+
T Consensus 80 h~A~ 83 (321)
T 2pk3_A 80 HLAA 83 (321)
T ss_dssp ECCS
T ss_pred EcCc
Confidence 6544
No 139
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=89.72 E-value=1.3 Score=41.13 Aligned_cols=70 Identities=13% Similarity=-0.004 Sum_probs=46.9
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc----CC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR----GC 144 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~----~~ 144 (537)
|.|++||.| .|.++..+++.+.+.|++|++++.+.+ . ..+ ..+..+ ..+.+.+.+++++. ++
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--~--~~~--~~~~~D-------~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--G--EDL--IYVEGD-------VTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--S--SSS--EEEECC-------TTCHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--c--cce--EEEeCC-------CCCHHHHHHHHHHHHhhCCc
Confidence 357899999 578999999999999999999875543 1 111 334332 44555555555432 68
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.++-.-|
T Consensus 68 d~li~~ag 75 (242)
T 1uay_A 68 FAVVSAAG 75 (242)
T ss_dssp EEEEECCC
T ss_pred eEEEEccc
Confidence 88886544
No 140
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=89.42 E-value=1.3 Score=43.83 Aligned_cols=75 Identities=11% Similarity=-0.073 Sum_probs=51.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc---c--CEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL---A--DESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~---a--d~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 144 (537)
.|+|||.| .|.+|..+++.+.+.|++|+++............. . -+.+.. +..+.+.+.++++..++
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 81 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG-------DIRDQNKLLESIREFQP 81 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEEC-------CTTCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEc-------cccCHHHHHHHHHhcCC
Confidence 46899999 59999999999999999999987554332211110 1 123332 35677788887777689
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|+|+-.-+
T Consensus 82 d~vih~A~ 89 (357)
T 1rkx_A 82 EIVFHMAA 89 (357)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99886544
No 141
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=89.36 E-value=0.62 Score=46.98 Aligned_cols=115 Identities=8% Similarity=0.023 Sum_probs=73.9
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~ 151 (537)
+||||+|+|.++..+++.+.+ .+++.+++.+..........+ ..+.++ ..|.+.+.++++ ++|+|+...
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~-~~~~~d-------~~d~~~l~~~~~--~~DvVi~~~ 85 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFA-TPLKVD-------ASNFDKLVEVMK--EFELVIGAL 85 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTS-EEEECC-------TTCHHHHHHHHT--TCSEEEECC
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccC-CcEEEe-------cCCHHHHHHHHh--CCCEEEEec
Confidence 479999999999999999976 467777643322111111122 234443 567888888875 589999876
Q ss_pred CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCC
Q 009323 152 GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 152 g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~ 202 (537)
+.. -...++++|.+.|..++-.+.+. ..-..+.+.++++|+...+.
T Consensus 86 p~~-~~~~v~~~~~~~g~~yvD~s~~~----~~~~~l~~~a~~~g~~~i~~ 131 (365)
T 3abi_A 86 PGF-LGFKSIKAAIKSKVDMVDVSFMP----ENPLELRDEAEKAQVTIVFD 131 (365)
T ss_dssp CGG-GHHHHHHHHHHHTCEEEECCCCS----SCGGGGHHHHHHTTCEEECC
T ss_pred CCc-ccchHHHHHHhcCcceEeeeccc----hhhhhhhhhhccCCceeeec
Confidence 542 34678899999999887433211 11123456778888876654
No 142
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.08 E-value=1.5 Score=43.14 Aligned_cols=75 Identities=13% Similarity=-0.039 Sum_probs=50.3
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCCh-hhhccC-EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~-~~~~ad-~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
.|+|||.|+ |.+|..+++.+.+.|++|+++......... ...+.. +.+.. +..+.+.+.+++++.++|+|
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~-------Dl~d~~~~~~~~~~~~~D~v 92 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEG-------SVTDAGLLERAFDSFKPTHV 92 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEEC-------CTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEe-------eCCCHHHHHHHHhhcCCCEE
Confidence 368999995 899999999999999999998754322110 011111 12322 35667777777766689998
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-.-+
T Consensus 93 ih~A~ 97 (330)
T 2pzm_A 93 VHSAA 97 (330)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 86544
No 143
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.05 E-value=0.77 Score=44.50 Aligned_cols=35 Identities=9% Similarity=0.069 Sum_probs=31.1
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|.++|+|+|+|..+..++..+++.|++|++++..
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 34579999999999999999999999999999644
No 144
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.04 E-value=0.24 Score=51.90 Aligned_cols=75 Identities=17% Similarity=0.038 Sum_probs=50.9
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~ 151 (537)
|||+|+|.|..|..+++.+.+.|+++++++.+++........-|-.+..| +..+. .+++-|.-..+|+++...
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~G------d~~~~-~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNG------HASHP-DVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEES------CTTCH-HHHHHHTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEE------cCCCH-HHHHhcCCCcCCEEEEEc
Confidence 58999999999999999999999999999765543222122235444444 23333 444555556799998765
Q ss_pred Cc
Q 009323 152 GF 153 (537)
Q Consensus 152 g~ 153 (537)
+.
T Consensus 77 ~~ 78 (461)
T 4g65_A 77 NT 78 (461)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 145
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=88.99 E-value=2.2 Score=43.02 Aligned_cols=78 Identities=17% Similarity=0.150 Sum_probs=52.7
Q ss_pred CCcEEEEE--cCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 70 RQEKILVA--NRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~--g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
..++|||. |.|.++..+++.|+.+|.+|+++..+.+......++ +|+.+... +....+.+.++....++|.
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~------~~~~~~~v~~~t~~~g~d~ 243 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAA------SPTFMQDLTEALVSTGATI 243 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETT------STTHHHHHHHHHHHHCCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCC------ChHHHHHHHHHhcCCCceE
Confidence 35689998 789999999999999999999886443322222222 45555321 1122456677776678999
Q ss_pred EEeCCCc
Q 009323 147 LHPGYGF 153 (537)
Q Consensus 147 V~p~~g~ 153 (537)
|+-..|.
T Consensus 244 v~d~~g~ 250 (379)
T 3iup_A 244 AFDATGG 250 (379)
T ss_dssp EEESCEE
T ss_pred EEECCCc
Confidence 9977653
No 146
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=88.91 E-value=1.4 Score=43.43 Aligned_cols=75 Identities=17% Similarity=-0.008 Sum_probs=49.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCCh--hhhcc----CEEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDAL--HVKLA----DESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~--~~~~a----d~~~~i~~~~~~~~~~~~~~i~~~a~~~~ 143 (537)
||+|||.| .|-+|..+++.+.+.|++|++++........ ...+. -+.+.. +..+.+.+.++.+..+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~ 73 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHG-------DIRNKNDVTRLITKYM 73 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEEC-------CTTCHHHHHHHHHHHC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEc-------CCCCHHHHHHHHhccC
Confidence 36899999 6899999999999999999998643211110 01111 123332 3567777777777667
Q ss_pred CCEEEeCCC
Q 009323 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~p~~g 152 (537)
+|.|+-.-+
T Consensus 74 ~d~vih~A~ 82 (347)
T 1orr_A 74 PDSCFHLAG 82 (347)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 999886544
No 147
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=88.87 E-value=1.3 Score=46.29 Aligned_cols=85 Identities=13% Similarity=0.089 Sum_probs=58.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
.||+.|.+.+..+..+++.++++|.+++.+.+............++.+ + .|...+.+++++.++|.++.+
T Consensus 313 Gkrv~i~~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~v~-~---------~D~~~le~~i~~~~pDllig~ 382 (458)
T 3pdi_B 313 SARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVR-V---------GDLEDLEHAARAGQAQLVIGN 382 (458)
T ss_dssp TCEEEEECCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSCEE-E---------SHHHHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCcEE-e---------CCHHHHHHHHHhcCCCEEEEC
Confidence 589999999999999999999999999877654322111111123322 2 356678888888999999954
Q ss_pred CCcccccHHHHHHHHHCCCcee
Q 009323 151 YGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~ 172 (537)
.- -..+++++|++++
T Consensus 383 ~~-------~~~~a~k~gip~~ 397 (458)
T 3pdi_B 383 SH-------ALASARRLGVPLL 397 (458)
T ss_dssp TT-------HHHHHHHTTCCEE
T ss_pred hh-------HHHHHHHcCCCEE
Confidence 31 2245667888876
No 148
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=88.68 E-value=0.6 Score=46.93 Aligned_cols=150 Identities=13% Similarity=0.103 Sum_probs=82.7
Q ss_pred CCCCCcEEEEEcCcHHHHHHHHHHH-H-cCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009323 67 VTCRQEKILVANRGEIAVRVIRTAH-E-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 67 ~~~~~~kvLi~g~g~~a~~ii~aa~-~-~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 144 (537)
..||+.||.|+|.|.++...++++. + -|+++++++ +.+... ...+++++ + .....|.+.++++ ....+
T Consensus 19 ~~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~-d~~~~~-~~~~a~~~---g--~~~~~~~~~~~ll---~~~~~ 88 (357)
T 3ec7_A 19 FQGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVC-DIVAGR-AQAALDKY---A--IEAKDYNDYHDLI---NDKDV 88 (357)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEE-CSSTTH-HHHHHHHH---T--CCCEEESSHHHHH---HCTTC
T ss_pred cCCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEE-eCCHHH-HHHHHHHh---C--CCCeeeCCHHHHh---cCCCC
Confidence 3445569999999999999999998 4 478888765 333221 12222211 0 0011255666654 34579
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCC--CCCcCccCCCHHHHHHHHHH--h
Q 009323 145 TMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT--VPGSDGLLQSTEEAVKLADE--L 220 (537)
Q Consensus 145 d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipv--p~~~~~~~~s~~~~~~~~~~--i 220 (537)
|+|+-.... ......+..+.+.|..++.-.|-+. ...+=..+.+.+++.|+.. ..+..+.......+++.++. +
T Consensus 89 D~V~i~tp~-~~h~~~~~~al~aGk~Vl~EKPla~-~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~g~i 166 (357)
T 3ec7_A 89 EVVIITASN-EAHADVAVAALNANKYVFCEKPLAV-TAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEI 166 (357)
T ss_dssp CEEEECSCG-GGHHHHHHHHHHTTCEEEEESSSCS-SHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHHTTT
T ss_pred CEEEEcCCc-HHHHHHHHHHHHCCCCEEeecCccC-CHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhcCCC
Confidence 999865421 2345666777788887653111111 1111223445667888865 23322333345566666654 7
Q ss_pred CCcEEEEe
Q 009323 221 GFPVMIKA 228 (537)
Q Consensus 221 g~PvvvKp 228 (537)
|-+..+..
T Consensus 167 G~i~~v~~ 174 (357)
T 3ec7_A 167 GQPLMVHG 174 (357)
T ss_dssp CSEEEEEE
T ss_pred CCeEEEEE
Confidence 77776654
No 149
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=88.55 E-value=2.3 Score=40.16 Aligned_cols=71 Identities=15% Similarity=0.078 Sum_probs=46.4
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~-----~~ 143 (537)
+.|++||.| .+.++..+++.+.+.|++|++++.+.+.... -..+..+ ..+.+.+.+++++ .+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~D-------l~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----FLAVKCD-------ITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEECC-------TTSHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----ceEEEec-------CCCHHHHHHHHHHHHHHcCC
Confidence 357899999 5789999999999999999998755432211 1233332 3455555444433 25
Q ss_pred CCEEEeCCC
Q 009323 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~p~~g 152 (537)
+|.++-.-|
T Consensus 88 iD~lv~nAg 96 (253)
T 2nm0_A 88 VEVLIANAG 96 (253)
T ss_dssp CSEEEEECS
T ss_pred CCEEEECCC
Confidence 898886544
No 150
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.28 E-value=1.9 Score=42.90 Aligned_cols=75 Identities=11% Similarity=0.015 Sum_probs=48.9
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHH--cCCCEEEEecCCCCC----------Chhhhcc---CEEEEcCCCCCCCCCCCHH
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHE--MGIPCVAVYSTIDKD----------ALHVKLA---DESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~--~G~~vv~v~~~~d~~----------~~~~~~a---d~~~~i~~~~~~~~~~~~~ 133 (537)
++|+|||.| .|-+|..+++.+.+ .|++|++++...... ....... -+.+.. +..+.+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~ 81 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA-------DINNPL 81 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC-------CTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEEC-------CCCCHH
Confidence 357999998 58999999999999 999999997543310 0011111 133333 355666
Q ss_pred HHHHHHHHcCCCEEEeCCC
Q 009323 134 NVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 134 ~i~~~a~~~~~d~V~p~~g 152 (537)
.+.++ ...++|.|+-.-+
T Consensus 82 ~~~~~-~~~~~D~vih~A~ 99 (362)
T 3sxp_A 82 DLRRL-EKLHFDYLFHQAA 99 (362)
T ss_dssp HHHHH-TTSCCSEEEECCC
T ss_pred HHHHh-hccCCCEEEECCc
Confidence 66665 3467999986544
No 151
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=88.24 E-value=0.82 Score=44.60 Aligned_cols=62 Identities=13% Similarity=0.114 Sum_probs=46.5
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+.|+|||.| .|.++..+++.+.+.|++|+++..... -+..+.+.+.++++..++|+|+
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~---------------------~D~~d~~~~~~~~~~~~~d~vi 60 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------LNLLDSRAVHDFFASERIDQVY 60 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------CCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc---------------------CCccCHHHHHHHHHhcCCCEEE
Confidence 347899999 599999999999999999887642210 1345677787777766899988
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-+
T Consensus 61 h~a~ 64 (321)
T 1e6u_A 61 LAAA 64 (321)
T ss_dssp ECCC
T ss_pred EcCe
Confidence 6544
No 152
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.18 E-value=0.99 Score=43.91 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=29.1
Q ss_pred CcEEEEEcCc---HHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVANRG---EIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~g---~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.|++ .++..+++.+.+.|++|++++.+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999975 79999999999999999988654
No 153
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=88.09 E-value=3.8 Score=40.29 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=60.6
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHH------HcC
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAI------SRG 143 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~------~~~ 143 (537)
|.||.|+|. |.++...++++++.|.+++++.. .+... ...+.. + +...-|.+.+++++... ...
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d-~~~~~--~~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~~ 73 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYD-INDSV--GIIDSI-S-----PQSEFFTEFEFFLDHASNLKRDSATA 73 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEEC-SSCCC--GGGGGT-C-----TTCEEESSHHHHHHHHHHHTTSTTTS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEc-CCHHH--HHHHhh-C-----CCCcEECCHHHHHHhhhhhhhccCCC
Confidence 469999998 78999999999999999888863 33222 112211 1 12234677888876432 457
Q ss_pred CCEEEeCCCcccccHHHHHHHHHCCCceeC
Q 009323 144 CTMLHPGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 144 ~d~V~p~~g~~se~~~~a~~~e~~gi~~~G 173 (537)
+|+|+-..-. ......+..+.+.|..++.
T Consensus 74 vD~V~I~tP~-~~H~~~~~~al~aGkhVl~ 102 (318)
T 3oa2_A 74 LDYVSICSPN-YLHYPHIAAGLRLGCDVIC 102 (318)
T ss_dssp CCEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred CcEEEECCCc-HHHHHHHHHHHHCCCeEEE
Confidence 9999865421 2335667777788887763
No 154
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=87.99 E-value=1.9 Score=42.26 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=50.9
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCCh-hh-hcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDAL-HV-KLA--DESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~-~~-~~a--d~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d 145 (537)
.|+|||.|+ |.+|..+++.+.+.|++|++++.+.+.... .. .+. .....+. -+..|.+.+.++++..++|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~~~~~~~d 77 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIH-----MDLLEFSNIIRTIEKVQPD 77 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECC-----CCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEE-----CCCCCHHHHHHHHHhcCCC
Confidence 468999995 999999999999999999998654432211 11 110 1111111 1356777888877776889
Q ss_pred EEEeCCC
Q 009323 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~p~~g 152 (537)
.|+-.-+
T Consensus 78 ~vih~A~ 84 (345)
T 2z1m_A 78 EVYNLAA 84 (345)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9886544
No 155
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=87.94 E-value=2.1 Score=40.53 Aligned_cols=31 Identities=39% Similarity=0.446 Sum_probs=26.4
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
|+||.|+|.|.++..+++++.+.+.+++.+.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~ 33 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVI 33 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEE
Confidence 5699999999999999999999877666544
No 156
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=87.58 E-value=1.6 Score=42.34 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=47.5
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|||||.|+ |-++..+++.+.+.|++|++++....... ..+.+ +.+.. +..+.+.+.++.++.++|.|+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~-------Dl~~~~~~~~~~~~~~~d~vi 71 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR--ENVPKGVPFFRV-------DLRDKEGVERAFREFRPTHVS 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG--GGSCTTCCEECC-------CTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch--hhcccCeEEEEC-------CCCCHHHHHHHHHhcCCCEEE
Confidence 37999994 89999999999999999998853221111 11111 12221 355677777777666899888
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-+
T Consensus 72 ~~a~ 75 (311)
T 2p5y_A 72 HQAA 75 (311)
T ss_dssp ECCS
T ss_pred ECcc
Confidence 5543
No 157
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=87.49 E-value=3.5 Score=41.82 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=32.3
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
+..+++|.|.|..+..+++-++.+||+|+++++.++
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 346999999999999999999999999999986654
No 158
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.45 E-value=0.3 Score=45.76 Aligned_cols=112 Identities=12% Similarity=0.097 Sum_probs=62.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
.++|+|+|.|..+..+++.+.+.|+ +++++.+++... ... .+..+..+ +..+.+.+.+. .-.++|.|+..
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~g------d~~~~~~l~~a-~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHG------DPTRVSDLEKA-NVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHH-HHH-TTCEEEES------CTTCHHHHHHT-TCTTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHH-HHh-cCCeEEEc------CCCCHHHHHhc-CcchhcEEEEc
Confidence 4689999999999999999999999 888854332111 111 22223232 24454444433 23468999876
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCC
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gip 198 (537)
.+....+......+.+.+. ....+..+.|.... +.++++|+.
T Consensus 79 ~~~d~~n~~~~~~a~~~~~-----~~~iia~~~~~~~~-~~l~~~G~~ 120 (234)
T 2aef_A 79 LESDSETIHCILGIRKIDE-----SVRIIAEAERYENI-EQLRMAGAD 120 (234)
T ss_dssp CSCHHHHHHHHHHHHHHCS-----SSEEEEECSSGGGH-HHHHHHTCS
T ss_pred CCCcHHHHHHHHHHHHHCC-----CCeEEEEECCHhHH-HHHHHCCCC
Confidence 5533233444455555432 21222233343333 355667765
No 159
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=87.35 E-value=0.91 Score=43.45 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=29.5
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 457899999 5789999999999999999998654
No 160
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=87.34 E-value=1.7 Score=43.01 Aligned_cols=73 Identities=10% Similarity=0.086 Sum_probs=48.4
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-c---------cC-EEEEcCCCCCCCCCCCHHHHHHH
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L---------AD-ESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-~---------ad-~~~~i~~~~~~~~~~~~~~i~~~ 138 (537)
+++|||.|+ |-+|..+++.+.+.|++|+++............ + .. +.+.. +..+.+.+.++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 99 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG-------DIRNLDDCNNA 99 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEEC-------CTTSHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEEC-------CCCCHHHHHHH
Confidence 578999995 999999999999999999998654322111110 0 11 22322 35566777776
Q ss_pred HHHcCCCEEEeCCC
Q 009323 139 AISRGCTMLHPGYG 152 (537)
Q Consensus 139 a~~~~~d~V~p~~g 152 (537)
++ ++|.|+-.-+
T Consensus 100 ~~--~~d~vih~A~ 111 (352)
T 1sb8_A 100 CA--GVDYVLHQAA 111 (352)
T ss_dssp HT--TCSEEEECCS
T ss_pred hc--CCCEEEECCc
Confidence 64 7999886544
No 161
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=87.17 E-value=1.2 Score=42.47 Aligned_cols=75 Identities=8% Similarity=0.077 Sum_probs=46.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-ccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-~ad~~~~i~~~~~~~~~~~~~~i~~~a~~-----~~ 143 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+....... ..-..+..+ ..+.+.+.+++++ -+
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D-------v~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGD-------FSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECC-------TTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECC-------CCCHHHHHHHHHHHHHhcCC
Confidence 47899999 5789999999999999999998755432111111 112333332 3444555444433 26
Q ss_pred CCEEEeCCC
Q 009323 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~p~~g 152 (537)
+|.++-.-|
T Consensus 100 iD~lv~nAg 108 (260)
T 3gem_A 100 LRAVVHNAS 108 (260)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899886654
No 162
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=87.11 E-value=3.6 Score=40.60 Aligned_cols=93 Identities=13% Similarity=0.077 Sum_probs=58.1
Q ss_pred CcEEEEEcCcHHHHH-HHHHHHHcCCCEEEEecCCCCCC-hhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVR-VIRTAHEMGIPCVAVYSTIDKDA-LHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~-ii~aa~~~G~~vv~v~~~~d~~~-~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+|||+|+|.|.++.. +++.++++|++|.+.+....... ...+...-.+..+. +.+.+.. .++|.|+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--------~~~~l~~----~~~d~vV 71 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--------DAAQLDE----FKADVYV 71 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--------CGGGGGS----CCCSEEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--------CHHHcCC----CCCCEEE
Confidence 579999999999996 88999999999999865433211 11111222333331 1111100 3589999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHH
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPD 177 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~ 177 (537)
...|.-.+++.+. .+.+.|+++++ ..+
T Consensus 72 ~Spgi~~~~p~~~-~a~~~gi~v~~-~~e 98 (326)
T 3eag_A 72 IGNVAKRGMDVVE-AILNLGLPYIS-GPQ 98 (326)
T ss_dssp ECTTCCTTCHHHH-HHHHTTCCEEE-HHH
T ss_pred ECCCcCCCCHHHH-HHHHcCCcEEe-HHH
Confidence 7776655666654 45678999884 344
No 163
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=87.08 E-value=0.53 Score=44.80 Aligned_cols=71 Identities=13% Similarity=0.017 Sum_probs=47.9
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|+|+|||.|+ |.++..+++.+.+.|++|+++......... .. -+.+. -+..+.+.+.++++ ++|.|+
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~--~~~~~-------~Dl~d~~~~~~~~~--~~d~vi 68 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE-AH--EEIVA-------CDLADAQAVHDLVK--DCDGII 68 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC-TT--EEECC-------CCTTCHHHHHHHHT--TCSEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC-CC--ccEEE-------ccCCCHHHHHHHHc--CCCEEE
Confidence 4689999995 999999999999999999988654432111 00 01221 13556677777664 599888
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-+
T Consensus 69 ~~a~ 72 (267)
T 3ay3_A 69 HLGG 72 (267)
T ss_dssp ECCS
T ss_pred ECCc
Confidence 6544
No 164
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.04 E-value=1.2 Score=42.23 Aligned_cols=31 Identities=10% Similarity=0.231 Sum_probs=27.0
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGI-PCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~ 101 (537)
.++|||+|.|.++..+++.+.+.|+ ++++++
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD 62 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLD 62 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEc
Confidence 3689999999999999999999999 555663
No 165
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=86.80 E-value=3.9 Score=38.83 Aligned_cols=70 Identities=9% Similarity=0.028 Sum_probs=46.5
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RGC 144 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~-----~~~ 144 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+.. . .-..+..+ ..+.+.+.+++++ -++
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~--~~~~~~~D-------l~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE---A--KYDHIECD-------VTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS---C--SSEEEECC-------TTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC---C--ceEEEEec-------CCCHHHHHHHHHHHHHHcCCC
Confidence 57899999 57899999999999999999987554431 0 11233332 4455555544433 269
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.++-.-|
T Consensus 76 D~lv~~Ag 83 (264)
T 2dtx_A 76 SVLVNNAG 83 (264)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886654
No 166
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=86.72 E-value=0.78 Score=43.66 Aligned_cols=35 Identities=11% Similarity=0.040 Sum_probs=29.8
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
|.|+|||.| ++.++..+++.+.+.|.+|++++.+.
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~ 36 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE 36 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 568999999 57799999999999999999987543
No 167
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=86.42 E-value=4.7 Score=37.75 Aligned_cols=71 Identities=10% Similarity=0.033 Sum_probs=47.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~~ 144 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+... ..-..+.. +..+.+.+.+++++. ++
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~-------D~~d~~~~~~~~~~~~~~~g~i 75 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ----YPFATEVM-------DVADAAQVAQVCQRLLAETERL 75 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC----CSSEEEEC-------CTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc----CCceEEEc-------CCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999 578999999999999999999876543211 11223333 244555555554432 68
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.++-.-|
T Consensus 76 d~lv~~Ag 83 (250)
T 2fwm_X 76 DALVNAAG 83 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886654
No 168
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=86.18 E-value=0.85 Score=43.00 Aligned_cols=76 Identities=8% Similarity=-0.101 Sum_probs=46.3
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhccCE-EEEcCCCCCCCCCCCHHHHHHHHHH-----
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLADE-SVCIGEAPSSQSYLLIPNVLSAAIS----- 141 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~ad~-~~~i~~~~~~~~~~~~~~i~~~a~~----- 141 (537)
|.|++||.| .+.++..+++.+.+.|++|++++.+.+..... ....+. .+.. +..+.+.+.+++++
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 73 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHG-------DVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEEC-------CTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEe-------eCCCHHHHHHHHHHHHHHc
Confidence 457899999 57799999999999999999986443211110 111111 3332 23445555444433
Q ss_pred cCCCEEEeCCC
Q 009323 142 RGCTMLHPGYG 152 (537)
Q Consensus 142 ~~~d~V~p~~g 152 (537)
.++|.++-.-|
T Consensus 74 g~id~lv~nAg 84 (247)
T 3dii_A 74 QRIDVLVNNAC 84 (247)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 27999886654
No 169
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.02 E-value=2 Score=39.90 Aligned_cols=76 Identities=9% Similarity=0.095 Sum_probs=47.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcC--CCEEEEecCCCCCChhhhc--cC-EEEEcCCCCCCCCCCCHHHHHHHHHHc--
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMG--IPCVAVYSTIDKDALHVKL--AD-ESVCIGEAPSSQSYLLIPNVLSAAISR-- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G--~~vv~v~~~~d~~~~~~~~--ad-~~~~i~~~~~~~~~~~~~~i~~~a~~~-- 142 (537)
.|++||.| .|.++..+++.+.+.| ++|++++.+.+........ .. ..+.. +..+.+.+.+++++.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL-------TVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEEC-------CTTCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEe-------ecCCHHHHHHHHHHHHH
Confidence 57899999 5789999999999999 9999987544322111111 11 22322 234455554444432
Q ss_pred -----CCCEEEeCCCc
Q 009323 143 -----GCTMLHPGYGF 153 (537)
Q Consensus 143 -----~~d~V~p~~g~ 153 (537)
++|.|+-.-|.
T Consensus 76 ~~g~~~id~li~~Ag~ 91 (250)
T 1yo6_A 76 IVGSDGLSLLINNAGV 91 (250)
T ss_dssp HHGGGCCCEEEECCCC
T ss_pred hcCCCCCcEEEECCcc
Confidence 79998866543
No 170
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=85.73 E-value=2.3 Score=39.88 Aligned_cols=76 Identities=12% Similarity=-0.013 Sum_probs=48.9
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccC-EEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-ESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad-~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~d~ 146 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+.+.......+.. ..+.. +..+.+.+.++.++. ++|.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 77 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL-------DVTKKKQIDQFANEVERLDV 77 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEEC-------CTTCHHHHHHHHHHCSCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEe-------eCCCHHHHHHHHHHhCCCCE
Confidence 357899999 5789999999999999999988654321111011111 22332 245666666666654 6898
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
++-.-|
T Consensus 78 lv~~Ag 83 (246)
T 2ag5_A 78 LFNVAG 83 (246)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886544
No 171
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=85.67 E-value=1.4 Score=41.07 Aligned_cols=69 Identities=13% Similarity=-0.026 Sum_probs=46.4
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc--CCCEE
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR--GCTML 147 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~--~~d~V 147 (537)
||+|||.|+ |.++..+++.+.+.|++|++++.+.+... .+ + .-+..+.+.+.+++++. ++|.|
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~----~-----~~D~~~~~~~~~~~~~~~~~~d~v 66 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----AD----L-----STPGGRETAVAAVLDRCGGVLDGL 66 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CC----T-----TSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----cc----c-----cCCcccHHHHHHHHHHcCCCccEE
Confidence 468999995 88999999999999999999865433211 00 1 11233445666666654 79999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-.-|.
T Consensus 67 i~~Ag~ 72 (255)
T 2dkn_A 67 VCCAGV 72 (255)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 866543
No 172
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=85.64 E-value=2 Score=41.10 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=31.2
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.....|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4334457899999 5789999999999999999988644
No 173
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=85.50 E-value=1.1 Score=44.92 Aligned_cols=143 Identities=12% Similarity=0.092 Sum_probs=80.3
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHc--CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+|.|.++...++.+++. ++++++++ +.+... ...+++++- + ..|.+.++++ ....+|+|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~-d~~~~~-~~~~~~~~~-~------~~~~~~~~ll---~~~~~D~V~ 80 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVC-DIDPAA-LKAAVERTG-A------RGHASLTDML---AQTDADIVI 80 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEE-CSSHHH-HHHHHHHHC-C------EEESCHHHHH---HHCCCSEEE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEE-cCCHHH-HHHHHHHcC-C------ceeCCHHHHh---cCCCCCEEE
Confidence 46899999999999999999998 78888765 322211 112222110 0 1256666654 346799998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCc-CccCCCHHHHHHHHH--HhCCcEE
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGS-DGLLQSTEEAVKLAD--ELGFPVM 225 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~-~~~~~s~~~~~~~~~--~ig~Pvv 225 (537)
-..-. ......+..+.+.|..++.-.|-+.. ..+=..+.+.+++.|+..--.+ .+.......+++..+ .+|-+..
T Consensus 81 i~tp~-~~h~~~~~~al~~gk~v~~EKP~a~~-~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 158 (354)
T 3q2i_A 81 LTTPS-GLHPTQSIECSEAGFHVMTEKPMATR-WEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYM 158 (354)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECSSSCSS-HHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTCSEEE
T ss_pred ECCCc-HHHHHHHHHHHHCCCCEEEeCCCcCC-HHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCCCceEE
Confidence 65421 12355666667788876642221111 1112234456677787663222 122234455666665 4676665
Q ss_pred EE
Q 009323 226 IK 227 (537)
Q Consensus 226 vK 227 (537)
+.
T Consensus 159 v~ 160 (354)
T 3q2i_A 159 VN 160 (354)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 174
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=85.47 E-value=0.85 Score=42.05 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=29.1
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
|...|+|+|+|+.+..++..|.+.|++|+++..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 334699999999999999999999999999953
No 175
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=85.39 E-value=2.6 Score=44.36 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=57.6
Q ss_pred CcEEEEEcCcHHHHH-HHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANRGEIAVR-VIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~-ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
+|+|+|+|-|.++.. +++.++++|++|.+.+....+.....+...-.+.++. +.+.+ .++|.|+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--------~~~~~------~~~d~vV~ 87 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHH--------RPENV------LDASVVVV 87 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSC--------CGGGG------TTCSEEEE
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCC--------CHHHc------CCCCEEEE
Confidence 589999999999986 8999999999999885332211111111222333331 11111 35899997
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHH
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDS 178 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~ 178 (537)
..|.-..++.+.. +.+.|+++++ ..+.
T Consensus 88 Spgi~~~~p~~~~-a~~~gi~v~~-~~e~ 114 (494)
T 4hv4_A 88 STAISADNPEIVA-AREARIPVIR-RAEM 114 (494)
T ss_dssp CTTSCTTCHHHHH-HHHTTCCEEE-HHHH
T ss_pred CCCCCCCCHHHHH-HHHCCCCEEc-HHHH
Confidence 7776556666544 5578999884 4443
No 176
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=85.35 E-value=0.65 Score=43.06 Aligned_cols=89 Identities=12% Similarity=0.137 Sum_probs=56.2
Q ss_pred CcEEEEEcCcHHHHHHHHH--HHHcCCCEEEEecCCCCC-Chhh-hccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 71 QEKILVANRGEIAVRVIRT--AHEMGIPCVAVYSTIDKD-ALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~a--a~~~G~~vv~v~~~~d~~-~~~~-~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
.++|+|+|.|..|..+++. .++.|++++.+. |.|+. .... ....-.+ + ..+.+.++++++++|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~-D~dp~~kiG~~~i~GvpV----------~-~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAF-DLDSNDLVGKTTEDGIPV----------Y-GISTINDHLIDSDIET 151 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEE-ECTTSTTTTCBCTTCCBE----------E-EGGGHHHHC-CCSCCE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEE-eCCchhccCceeECCeEE----------e-CHHHHHHHHHHcCCCE
Confidence 4689999999999999988 456788888765 33433 3222 2222222 1 2456788888889998
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcee
Q 009323 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 147 V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
++-..-.. .....++.+.+.|++-+
T Consensus 152 vIIAvPs~-~aq~v~d~lv~~GIk~I 176 (212)
T 3keo_A 152 AILTVPST-EAQEVADILVKAGIKGI 176 (212)
T ss_dssp EEECSCGG-GHHHHHHHHHHHTCCEE
T ss_pred EEEecCch-hHHHHHHHHHHcCCCEE
Confidence 88553221 12356677777777644
No 177
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.30 E-value=1.5 Score=45.67 Aligned_cols=86 Identities=15% Similarity=0.100 Sum_probs=52.7
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccC---EEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD---ESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad---~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
.++|||+|.|..|.+.++.+.+.|.+|+++..+.. .....+++ -.+... .|.. +.+ .++|.|
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~--~~~~~l~~~~~i~~~~~------~~~~-~~l------~~~~lV 76 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFI--PQFTVWANEGMLTLVEG------PFDE-TLL------DSCWLA 76 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCC--HHHHHHHTTTSCEEEES------SCCG-GGG------TTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCC--HHHHHHHhcCCEEEEEC------CCCc-ccc------CCccEE
Confidence 47899999999999999999999999999964322 11122221 111111 1111 111 257888
Q ss_pred EeCCCcccccHHHHHHHHHCCCce
Q 009323 148 HPGYGFLAENAVFVEMCREHGINF 171 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~ 171 (537)
+...|-...+..+.+.+++.|+++
T Consensus 77 i~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 77 IAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCEE
T ss_pred EEcCCCHHHHHHHHHHHHHcCCEE
Confidence 766654322455666777777764
No 178
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=85.27 E-value=3.6 Score=41.30 Aligned_cols=74 Identities=15% Similarity=0.048 Sum_probs=49.8
Q ss_pred cEEEEEc-CcHHHHHHHHHHH-HcCCCEEEEecCCCCC--------Chhhh-----c-------c---CEEEEcCCCCCC
Q 009323 72 EKILVAN-RGEIAVRVIRTAH-EMGIPCVAVYSTIDKD--------ALHVK-----L-------A---DESVCIGEAPSS 126 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~-~~G~~vv~v~~~~d~~--------~~~~~-----~-------a---d~~~~i~~~~~~ 126 (537)
|+|||.| .|.++..+++.+. +.|++|++++...... ..... + . -+.+..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 76 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVG------ 76 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEES------
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEEC------
Confidence 4899999 5899999999999 9999999986543321 00110 0 0 123332
Q ss_pred CCCCCHHHHHHHHHHcC-CCEEEeCCC
Q 009323 127 QSYLLIPNVLSAAISRG-CTMLHPGYG 152 (537)
Q Consensus 127 ~~~~~~~~i~~~a~~~~-~d~V~p~~g 152 (537)
+..+.+.+.++.++.+ +|.|+-.-+
T Consensus 77 -Dl~d~~~~~~~~~~~~~~d~vih~A~ 102 (397)
T 1gy8_A 77 -DVRNEDFLNGVFTRHGPIDAVVHMCA 102 (397)
T ss_dssp -CTTCHHHHHHHHHHSCCCCEEEECCC
T ss_pred -CCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3566777877777667 999886644
No 179
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=85.26 E-value=1.2 Score=41.52 Aligned_cols=73 Identities=11% Similarity=0.096 Sum_probs=45.5
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCC--CEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGI--PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~--~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
.|+|||.| .|.++..+++.+.+.|+ +|+++..+.+.........-..+..+ ..+.+.+.++. .++|.|
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D-------~~d~~~~~~~~--~~~d~v 88 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVD-------FEKLDDYASAF--QGHDVG 88 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECC-------GGGGGGGGGGG--SSCSEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecC-------cCCHHHHHHHh--cCCCEE
Confidence 47899999 68999999999999999 99988765443221110011223221 23333444333 269998
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-.-|
T Consensus 89 i~~ag 93 (242)
T 2bka_A 89 FCCLG 93 (242)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86655
No 180
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=85.15 E-value=1.5 Score=40.67 Aligned_cols=76 Identities=12% Similarity=0.005 Sum_probs=46.5
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hc-cCEEEEcCCCCCCCCCCCHHHHHHHHHH-----
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL-ADESVCIGEAPSSQSYLLIPNVLSAAIS----- 141 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~----- 141 (537)
|.|++||.| .|.++..+++.+.+.|++|++++.+.+...... .+ .-..+.. +..+.+.+.++++.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~ 76 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPG-------DVREEGDWARAVAAMEEAF 76 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 357899999 678999999999999999998865432111000 11 1123333 24455555444433
Q ss_pred cCCCEEEeCCC
Q 009323 142 RGCTMLHPGYG 152 (537)
Q Consensus 142 ~~~d~V~p~~g 152 (537)
.++|.++-.-|
T Consensus 77 ~~id~li~~Ag 87 (234)
T 2ehd_A 77 GELSALVNNAG 87 (234)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 26898886654
No 181
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=85.14 E-value=1.5 Score=40.90 Aligned_cols=34 Identities=9% Similarity=0.009 Sum_probs=29.3
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999988644
No 182
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=85.12 E-value=5 Score=37.87 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=49.5
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcC-CCEEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRG-CTMLH 148 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~-~d~V~ 148 (537)
.|++||.| .+.++..+++.+.+.|.+|++++.+.+.........-..+.. +..+.+.+.++.++.+ +|.++
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREEL-------DITDSQRLQRLFEALPRLDVLV 83 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEEC-------CTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEe-------cCCCHHHHHHHHHhcCCCCEEE
Confidence 57999999 567999999999999999999976654332111111122222 2445666666666654 88888
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
..-|
T Consensus 84 NNAG 87 (242)
T 4b79_A 84 NNAG 87 (242)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6544
No 183
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=85.10 E-value=4.6 Score=38.46 Aligned_cols=71 Identities=17% Similarity=0.155 Sum_probs=47.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~~ 144 (537)
.|+|||.| .+.++..+++.+.+.|++|++++.+.+... . .-..+.++ ..+.+.+.+++++. ++
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---~-~~~~~~~D-------v~~~~~v~~~~~~~~~~~g~i 82 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---N-VSDHFKID-------VTNEEEVKEAVEKTTKKYGRI 82 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---T-SSEEEECC-------TTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---C-ceeEEEec-------CCCHHHHHHHHHHHHHHcCCC
Confidence 58999999 577999999999999999999875544321 1 12334432 44555555544432 79
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.++-.-|
T Consensus 83 D~lv~nAg 90 (269)
T 3vtz_A 83 DILVNNAG 90 (269)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886654
No 184
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=85.09 E-value=1.5 Score=40.83 Aligned_cols=73 Identities=11% Similarity=0.009 Sum_probs=48.1
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHc--CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
++|+|||.| .|.++..+++.+.+. |++|+++..+.+... .....-+.+.. +..+.+.+.++.+ ++|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~-------D~~d~~~~~~~~~--~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KIGGEADVFIG-------DITDADSINPAFQ--GIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-HTTCCTTEEEC-------CTTSHHHHHHHHT--TCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-hcCCCeeEEEe-------cCCCHHHHHHHHc--CCCE
Confidence 467999999 689999999999999 899998865432110 00000122332 3566777777764 5898
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-.-+
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 886544
No 185
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=85.09 E-value=1.5 Score=42.10 Aligned_cols=62 Identities=8% Similarity=0.064 Sum_probs=46.3
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..-++|||.| .|-+|..+++.+.+.|++|+++... . . +..+.+.+.++.+..++|.|
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------~------~-------Dl~d~~~~~~~~~~~~~d~v 67 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------D------L-------DITNVLAVNKFFNEKKPNVV 67 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------T------C-------CTTCHHHHHHHHHHHCCSEE
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------c------C-------CCCCHHHHHHHHHhcCCCEE
Confidence 3368999999 5889999999999999999988432 0 1 24566777777766689999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-.-+
T Consensus 68 ih~A~ 72 (292)
T 1vl0_A 68 INCAA 72 (292)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 86544
No 186
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=85.08 E-value=3.6 Score=38.51 Aligned_cols=71 Identities=14% Similarity=0.041 Sum_probs=46.4
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~-----~~ 143 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+.+.... .. .+.++ ..+.+.+.+++++ .+
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~--~~~~D-------~~~~~~~~~~~~~~~~~~g~ 81 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LF--GVEVD-------VTDSDAVDRAFTAVEEHQGP 81 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---SE--EEECC-------TTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---hc--Ceecc-------CCCHHHHHHHHHHHHHHcCC
Confidence 357899999 5789999999999999999998755432211 11 13332 3445555444433 26
Q ss_pred CCEEEeCCC
Q 009323 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~p~~g 152 (537)
+|.++..-|
T Consensus 82 id~lv~~Ag 90 (247)
T 1uzm_A 82 VEVLVSNAG 90 (247)
T ss_dssp CSEEEEECS
T ss_pred CCEEEECCC
Confidence 898886544
No 187
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=85.06 E-value=2.1 Score=42.95 Aligned_cols=75 Identities=11% Similarity=0.036 Sum_probs=47.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcC-CCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G-~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+|+|||.| .|.++..+++.+.+.| ++|+++...................+. -+..+.+.+.++++ ++|.|+
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~-----~Dl~d~~~l~~~~~--~~d~Vi 104 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSE-----TSITDDALLASLQD--EYDYVF 104 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEEC-----SCTTCHHHHHHCCS--CCSEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEE-----CCCCCHHHHHHHhh--CCCEEE
Confidence 46899999 5899999999999999 999998644332111111011111111 13556666666553 799988
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-+
T Consensus 105 h~A~ 108 (377)
T 2q1s_A 105 HLAT 108 (377)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6544
No 188
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=85.03 E-value=1.5 Score=46.80 Aligned_cols=110 Identities=13% Similarity=0.094 Sum_probs=69.5
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~ 151 (537)
++++|+|.|..+..+++.+.+.|+++++++.+++..... . ..+ .++ ..+. .+++.+.-.++|+++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---~-~~i-~gD------~t~~-~~L~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCND---H-VVV-YGD------ATVG-QTLRQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---S-CEE-ESC------SSSS-THHHHHTTTSCSEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---C-CEE-EeC------CCCH-HHHHhcCccccCEEEEEC
Confidence 789999999999999999999999999998776643322 2 334 331 2233 334445556799999877
Q ss_pred CcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 152 GFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 152 g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
+-..++......+.++| |....+....|.... +.++++|+..
T Consensus 417 ~~d~~ni~~~~~ak~l~-----~~~~iiar~~~~~~~-~~l~~~G~d~ 458 (565)
T 4gx0_A 417 NDDSTNIFLTLACRHLH-----SHIRIVARANGEENV-DQLYAAGADF 458 (565)
T ss_dssp SCHHHHHHHHHHHHHHC-----SSSEEEEEESSTTSH-HHHHHHTCSE
T ss_pred CCchHHHHHHHHHHHHC-----CCCEEEEEECCHHHH-HHHHHcCCCE
Confidence 64433444444555544 333334444454433 3466777663
No 189
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=85.01 E-value=3 Score=39.57 Aligned_cols=72 Identities=14% Similarity=0.061 Sum_probs=47.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-----CC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-----GC 144 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~-----~~ 144 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+..... .-..+.. +..+.+.+.+++++. ++
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DIHTVAG-------DISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TEEEEES-------CTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ceEEEEc-------cCCCHHHHHHHHHHHHHHCCCC
Confidence 57899999 57799999999999999999987654432211 1122332 244555555544432 79
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.++-.-|
T Consensus 98 D~lv~nAg 105 (260)
T 3un1_A 98 DSLVNNAG 105 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886654
No 190
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=84.92 E-value=0.16 Score=50.75 Aligned_cols=112 Identities=13% Similarity=0.093 Sum_probs=64.7
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
.++++|+|.|..+..+++.+.+.|+ +++++.+++... .+..+..+..+ +..+.+.+.++ .-.++|+|+..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~~~~~~~i~g------d~~~~~~L~~a-~i~~a~~vi~~ 184 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK--VLRSGANFVHG------DPTRVSDLEKA-NVRGARAVIVD 184 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HHHTTCEEEES------CTTSHHHHHHT-CSTTEEEEEEC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HHhCCcEEEEe------CCCCHHHHHhc-ChhhccEEEEc
Confidence 3589999999999999999999999 888854443222 11122333333 23454444433 33568888876
Q ss_pred CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCC
Q 009323 151 YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gip 198 (537)
.+-...+......+.+.+ |+...+....|.... +.++++|+.
T Consensus 185 ~~~d~~n~~~~~~ar~~~-----~~~~iiar~~~~~~~-~~l~~~G~d 226 (336)
T 1lnq_A 185 LESDSETIHCILGIRKID-----ESVRIIAEAERYENI-EQLRMAGAD 226 (336)
T ss_dssp CSSHHHHHHHHHHHHTTC-----TTSEEEEECSSGGGH-HHHHHTTCS
T ss_pred CCccHHHHHHHHHHHHHC-----CCCeEEEEECCHHHH-HHHHHcCCC
Confidence 543223334444455543 333333444555444 356677765
No 191
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=84.91 E-value=4.5 Score=39.55 Aligned_cols=73 Identities=10% Similarity=-0.012 Sum_probs=48.2
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hc----cC--EEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009323 73 KILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL----AD--ESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 73 kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~----ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 144 (537)
+|||.| .|-++..+++.+.+.|++|++++.......... .+ .. +.+.. +..+.+.+.++.+..++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~~~~~~~~~~~~~~~ 74 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEG-------DIRNEALMTEILHDHAI 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEEC-------CTTCHHHHHHHHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEc-------cCCCHHHHHHHhhccCC
Confidence 799999 588999999999999999998864322111111 00 11 23332 35567777777776689
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.|+-.-+
T Consensus 75 D~vih~A~ 82 (338)
T 1udb_A 75 DTVIHFAG 82 (338)
T ss_dssp SEEEECCS
T ss_pred CEEEECCc
Confidence 99886544
No 192
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=84.80 E-value=1.4 Score=41.16 Aligned_cols=34 Identities=12% Similarity=0.043 Sum_probs=29.4
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
+|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~ 37 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY 37 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 57899999 57899999999999999999986543
No 193
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=84.59 E-value=1.6 Score=43.52 Aligned_cols=79 Identities=13% Similarity=0.067 Sum_probs=51.5
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHH---HcCCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAI---SRGCT 145 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~---~~~~d 145 (537)
..++|||.|.|.++..+++.|+.+|.+|+++..+.+......++ +|..+... +.....+.+.+... ..++|
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~-----~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVD-----PAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECC-----TTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCc-----ccccHHHHHHHHhccccCCCCC
Confidence 45799999999999999999999999987775433322222222 46554321 01233556666554 35799
Q ss_pred EEEeCCCc
Q 009323 146 MLHPGYGF 153 (537)
Q Consensus 146 ~V~p~~g~ 153 (537)
.|+-..|.
T Consensus 243 ~vid~~g~ 250 (352)
T 1e3j_A 243 VTIDCSGN 250 (352)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99976653
No 194
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=84.32 E-value=1.8 Score=41.38 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=30.1
Q ss_pred CCcEEEEEcC---cHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g~---g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
..|++||.|+ +.++..+++.+.+.|++|++++.+.
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3578999996 5899999999999999999987554
No 195
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=84.30 E-value=2 Score=40.84 Aligned_cols=35 Identities=23% Similarity=0.186 Sum_probs=29.8
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
...|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457899999 5789999999999999999998654
No 196
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=84.27 E-value=6.3 Score=36.96 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=47.6
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCC
Q 009323 73 KILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGY 151 (537)
Q Consensus 73 kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~ 151 (537)
+|||.| .|.+|..+++.+.+ |++|+++..+.... .. +.. +..+.+.+.++.+..++|.|+-.-
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------~~-~~~-------Dl~~~~~~~~~~~~~~~d~vi~~a 65 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------GG-YKL-------DLTDFPRLEDFIIKKRPDVIINAA 65 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------TC-EEC-------CTTSHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------CC-cee-------ccCCHHHHHHHHHhcCCCEEEECC
Confidence 799999 58999999999995 99999987554321 11 333 356777788777766899998765
Q ss_pred Cc
Q 009323 152 GF 153 (537)
Q Consensus 152 g~ 153 (537)
+.
T Consensus 66 ~~ 67 (273)
T 2ggs_A 66 AM 67 (273)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 197
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.15 E-value=2.8 Score=40.62 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=32.3
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
|.....|++||.| .+.++..+++.+.+.|++|++++.+.+
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 76 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR 76 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4444567899999 577999999999999999999875543
No 198
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=84.13 E-value=1.3 Score=42.06 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=29.2
Q ss_pred CcEEEEEcC---cHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g~---g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.|+ +.++..+++.+.+.|++|++++.+.
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 378999996 5899999999999999999986544
No 199
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=84.05 E-value=2.5 Score=43.77 Aligned_cols=148 Identities=15% Similarity=0.076 Sum_probs=85.4
Q ss_pred cEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCE-------EEEcCC---------CCCCCCCCCHHH
Q 009323 72 EKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADE-------SVCIGE---------APSSQSYLLIPN 134 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~-------~~~i~~---------~~~~~~~~~~~~ 134 (537)
-||.|+|.|.++..+++.+.+. |++++++. +.+.... ...+.+ ...++. .....-|.|.++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~-D~~~era-~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ee 101 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALS-ARRLPNT-FKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDL 101 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEE-CSSTHHH-HHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEE-eCCHHHH-HHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHH
Confidence 5899999999999999888775 77888876 3332211 111110 000000 000112556555
Q ss_pred HHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHH
Q 009323 135 VLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAV 214 (537)
Q Consensus 135 i~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~ 214 (537)
++ ....+|+|+-..+...-....+..+.+.|..++.-+.+. ....-..+.++++++|+..-..+.......-++.
T Consensus 102 LL---~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l--~~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~eLv 176 (446)
T 3upl_A 102 IL---SNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEA--DVTIGPYLKAQADKQGVIYSLGAGDEPSSCMELI 176 (446)
T ss_dssp HH---TCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHH--HHHHHHHHHHHHHHHTCCEEECTTSHHHHHHHHH
T ss_pred Hh---cCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCccc--CHHHHHHHHHHHHHhCCeeeecCCcchHHHHHHH
Confidence 54 345799999554321112456677778899887434432 2233457777888999875332111112245778
Q ss_pred HHHHHhCCcEEE
Q 009323 215 KLADELGFPVMI 226 (537)
Q Consensus 215 ~~~~~ig~Pvvv 226 (537)
++++..|+.+|.
T Consensus 177 ~~a~~~G~~~v~ 188 (446)
T 3upl_A 177 EFVSALGYEVVS 188 (446)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHhCCCeEEE
Confidence 888999997654
No 200
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=83.97 E-value=10 Score=38.96 Aligned_cols=88 Identities=13% Similarity=0.195 Sum_probs=56.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
.|||+|+|.|..+...++.+++.|++|++.++....... ..+ ....+.++ ..+.+.+ . ++|.|+.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~-~~l~~G~~~~~g-------~~~~~~~----~--~~d~vV~ 70 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL-DKLPEAVERHTG-------SLNDEWL----M--AADLIVA 70 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTG-GGSCTTSCEEES-------SCCHHHH----H--TCSEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchh-HHhhCCCEEEEC-------CCcHHHh----c--cCCEEEe
Confidence 468999999999999999999999999998764433211 122 22233333 1122222 2 6899887
Q ss_pred CCCcccccHHHHHHHHHCCCceeC
Q 009323 150 GYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~G 173 (537)
..|....++.+ ..+.+.|+++++
T Consensus 71 s~gi~~~~p~~-~~a~~~~~~v~~ 93 (439)
T 2x5o_A 71 SPGIALAHPSL-SAAADAGIEIVG 93 (439)
T ss_dssp CTTSCTTCHHH-HHHHHTTCEEEC
T ss_pred CCCCCCCCHHH-HHHHHCCCcEEE
Confidence 77654445544 334567888874
No 201
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=83.94 E-value=5.3 Score=39.06 Aligned_cols=39 Identities=8% Similarity=-0.074 Sum_probs=31.4
Q ss_pred CcCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 65 LKVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 65 ~~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|.....|++||.| .+.++..+++.+.+.|++|++++..
T Consensus 40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 45555568899999 5779999999999999999998644
No 202
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=83.91 E-value=3.3 Score=41.08 Aligned_cols=77 Identities=6% Similarity=-0.139 Sum_probs=47.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCC--Chhhhcc-------CEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKD--ALHVKLA-------DESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~--~~~~~~a-------d~~~~i~~~~~~~~~~~~~~i~~~a~ 140 (537)
||+|||.| .|.+|..+++.+.+.|++|++++...+.. .....+. .....+ .-+..+.+.+.++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~ 75 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH-----YGDLSDTSNLTRILR 75 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEEC-----CCCSSCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEE-----ECCCCCHHHHHHHHH
Confidence 36899999 58999999999999999999886443221 0001110 111111 124567778888877
Q ss_pred HcCCCEEEeCCC
Q 009323 141 SRGCTMLHPGYG 152 (537)
Q Consensus 141 ~~~~d~V~p~~g 152 (537)
..++|.|+-.-+
T Consensus 76 ~~~~d~vih~A~ 87 (372)
T 1db3_A 76 EVQPDEVYNLGA 87 (372)
T ss_dssp HHCCSEEEECCC
T ss_pred hcCCCEEEECCc
Confidence 767898886543
No 203
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=83.66 E-value=1.5 Score=43.86 Aligned_cols=90 Identities=13% Similarity=0.148 Sum_probs=55.6
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
++.||.|+|.|.++...++++++. |+++++++ +.+.. ....+++++ + ...|.+.++++ ....+|+|+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~-d~~~~-~~~~~~~~~---g----~~~~~~~~~~l---~~~~~D~V~ 71 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCY-SRTED-KREKFGKRY---N----CAGDATMEALL---AREDVEMVI 71 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEE-CSSHH-HHHHHHHHH---T----CCCCSSHHHHH---HCSSCCEEE
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEE-CCCHH-HHHHHHHHc---C----CCCcCCHHHHh---cCCCCCEEE
Confidence 346899999999999999999998 88888775 32221 112222221 1 01266666655 346799988
Q ss_pred eCCCcccccHHHHHHHHHCCCcee
Q 009323 149 PGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
-.... ......+..+.+.|..++
T Consensus 72 i~tp~-~~h~~~~~~al~~gk~vl 94 (354)
T 3db2_A 72 ITVPN-DKHAEVIEQCARSGKHIY 94 (354)
T ss_dssp ECSCT-TSHHHHHHHHHHTTCEEE
T ss_pred EeCCh-HHHHHHHHHHHHcCCEEE
Confidence 65321 123555666667787655
No 204
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=83.58 E-value=4.3 Score=38.11 Aligned_cols=75 Identities=9% Similarity=-0.013 Sum_probs=47.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+.+...... .+.. ..+.. +..+.+.+.+++++.
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA-------DVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEc-------CCCCHHHHHHHHHHHHHHC
Confidence 47899999 578999999999999999999865543211111 1111 22332 244555555544432
Q ss_pred -CCCEEEeCCC
Q 009323 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~p~~g 152 (537)
++|.|+-.-|
T Consensus 85 g~id~li~~Ag 95 (265)
T 2o23_A 85 GRVDVAVNCAG 95 (265)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 7999886654
No 205
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=83.54 E-value=0.49 Score=47.58 Aligned_cols=78 Identities=13% Similarity=0.041 Sum_probs=49.9
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCC-EEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHH----HHHHHcCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIP-CVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVL----SAAISRGC 144 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~-vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~----~~a~~~~~ 144 (537)
..++|||.|.|.++..+++.|+.+|.+ |++++.+.+......+++|..+.... + ..+.+.+. ++....++
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~----~-~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKV----E-RLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEEC----C-SCCHHHHHHHHHHHTSSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccc----c-ccchHHHHHHHHHHhCCCCC
Confidence 357899999999999999999999998 77776554433344445655443210 0 11223333 33323479
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.|+-..|
T Consensus 254 Dvvid~~g 261 (363)
T 3m6i_A 254 AVALECTG 261 (363)
T ss_dssp SEEEECSC
T ss_pred CEEEECCC
Confidence 99997665
No 206
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=83.38 E-value=1.8 Score=41.04 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=31.8
Q ss_pred CcCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 65 LKVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 65 ~~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|.....|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 23 ~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 35555568999999 57899999999999999999886543
No 207
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=83.35 E-value=2.2 Score=42.08 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=32.7
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD 107 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~ 107 (537)
|.+||++.|..+.++..++++.+.|+++++|.+.+|..
T Consensus 1 ~~mrivf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~ 38 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRP 38 (314)
T ss_dssp CCCEEEEEECSGGGHHHHHHHHHSSSEEEEEECCCC--
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCCCc
Confidence 45699999999999999999999999999998876643
No 208
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=83.33 E-value=4.3 Score=38.91 Aligned_cols=66 Identities=9% Similarity=0.004 Sum_probs=45.8
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
+++|+|||.| .|-+|..+++.+.+.|+ .. . .....+. ...-+..|.+.+.++.+..++|.|
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~-~---------~~~~~~~--~~~~D~~d~~~~~~~~~~~~~d~V 65 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LP-G---------EDWVFVS--SKDADLTDTAQTRALFEKVQPTHV 65 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CT-T---------CEEEECC--TTTCCTTSHHHHHHHHHHSCCSEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------cc-c---------ccccccC--ceecccCCHHHHHHHHhhcCCCEE
Confidence 4578999999 58999999999999998 00 0 0111111 122346678888888888889998
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-.-+
T Consensus 66 ih~A~ 70 (319)
T 4b8w_A 66 IHLAA 70 (319)
T ss_dssp EECCC
T ss_pred EECce
Confidence 86543
No 209
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=83.30 E-value=3.4 Score=39.58 Aligned_cols=80 Identities=15% Similarity=0.109 Sum_probs=48.5
Q ss_pred cCCCCCcEEEEEcC-cH--HHHHHHHHHHHcCCCEEEEecCCCCCChhhhc----c-CEEEEcCCCCCCCCCCCHHHHHH
Q 009323 66 KVTCRQEKILVANR-GE--IAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL----A-DESVCIGEAPSSQSYLLIPNVLS 137 (537)
Q Consensus 66 ~~~~~~~kvLi~g~-g~--~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~----a-d~~~~i~~~~~~~~~~~~~~i~~ 137 (537)
|.....|++||.|+ |. ++..+++.+.+.|++|++++.+. .......+ . -..+.++ ..+.+.+.+
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~D-------l~~~~~v~~ 92 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCD-------VISDQEIKD 92 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECC-------TTCHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEee-------cCCHHHHHH
Confidence 55555689999994 34 99999999999999999986544 11111111 1 1233332 345555554
Q ss_pred HHHHc-----CCCEEEeCCCc
Q 009323 138 AAISR-----GCTMLHPGYGF 153 (537)
Q Consensus 138 ~a~~~-----~~d~V~p~~g~ 153 (537)
++++. ++|.++-.-|.
T Consensus 93 ~~~~~~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 93 LFVELGKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHHHHHHCSSCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCcc
Confidence 44432 68998866553
No 210
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=83.27 E-value=2.3 Score=44.10 Aligned_cols=115 Identities=10% Similarity=0.111 Sum_probs=67.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccC-----EEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLAD-----ESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad-----~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d 145 (537)
+++|||+|.|.++..+++.+.+.|+++++++.+.+. ...+++ ..+.+ +..+.+.+.+++. ++|
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~---a~~la~~~~~~~~~~~-------Dv~d~~~l~~~l~--~~D 70 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLES---AKKLSAGVQHSTPISL-------DVNDDAALDAEVA--KHD 70 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHH---HHHTTTTCTTEEEEEC-------CTTCHHHHHHHHT--TSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHH---HHHHHHhcCCceEEEe-------ecCCHHHHHHHHc--CCc
Confidence 578999999999999999999999998777543221 111221 12222 2445566666553 699
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCC
Q 009323 146 MLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 146 ~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~ 202 (537)
+|+...+.. -...+...+.+.|..++..... ......+.+.++++|+.+..+
T Consensus 71 vVIn~a~~~-~~~~i~~a~l~~g~~vvd~~~~----~~~~~~l~~aA~~aGv~~i~g 122 (450)
T 1ff9_A 71 LVISLIPYT-FHATVIKSAIRQKKHVVTTSYV----SPAMMELDQAAKDAGITVMNE 122 (450)
T ss_dssp EEEECCC---CHHHHHHHHHHHTCEEEESSCC----CHHHHHTHHHHHHTTCEEECS
T ss_pred EEEECCccc-cchHHHHHHHhCCCeEEEeecc----cHHHHHHHHHHHHCCCeEEeC
Confidence 999775532 1223444444556666532210 001224455677888876554
No 211
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=83.26 E-value=7.1 Score=36.63 Aligned_cols=76 Identities=11% Similarity=-0.006 Sum_probs=45.6
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+...... .+.. ..+.. +..+.+.+.+++++.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNA-------DVTNEADATAALAFAKQEF 79 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEc-------cCCCHHHHHHHHHHHHHHc
Confidence 47899999 578999999999999999999876544322111 1111 12222 234445554444332
Q ss_pred -CCCEEEeCCCc
Q 009323 143 -GCTMLHPGYGF 153 (537)
Q Consensus 143 -~~d~V~p~~g~ 153 (537)
++|.++-.-|.
T Consensus 80 g~id~lv~nAg~ 91 (257)
T 3tpc_A 80 GHVHGLVNCAGT 91 (257)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 79999876553
No 212
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=83.24 E-value=1 Score=43.59 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=30.8
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.++|||+|+|..|.+.++.+.+.|.+|+++..+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4799999999999999999999999999996543
No 213
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=83.23 E-value=4.1 Score=42.97 Aligned_cols=86 Identities=19% Similarity=0.037 Sum_probs=57.4
Q ss_pred CcEEEEEcCcHHHHHHHHHH-HHcCCCEEEEecCCCCCCh-----hhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009323 71 QEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDAL-----HVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa-~~~G~~vv~v~~~~d~~~~-----~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 144 (537)
.||++|.+.+..+..+++.+ +++|.+++.+.+....... ...+.++.+ + ..|...+.+++++.++
T Consensus 303 Gkrv~i~gd~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~~~~~v~-~--------~~D~~el~~~i~~~~p 373 (511)
T 2xdq_B 303 GKKAVVFGDNTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVL-I--------TDDHTVVGDAIARVEP 373 (511)
T ss_dssp TCEEEEEECHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTSSEEE-E--------CCCHHHHHHHHHHHCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHhcCCcEE-E--------eCCHHHHHHHHHhcCC
Confidence 58999999889999999999 8999999887544322111 112334433 3 2357788888888899
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcee
Q 009323 145 TMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 145 d~V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
|.++.+ ..-...+++.|++++
T Consensus 374 Dl~ig~-------~~~r~~a~k~gip~~ 394 (511)
T 2xdq_B 374 AAIFGT-------QMERHVGKRLNIPCG 394 (511)
T ss_dssp SEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CEEEec-------cchHHHHHhcCCCeE
Confidence 988832 222334456677653
No 214
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=83.15 E-value=1.6 Score=41.91 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=46.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLA--DESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~a--d~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+..... ..+. -..+.++ ..+.+.+.+++++.
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-------v~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVD-------VSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECC-------TTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEec-------CCCHHHHHHHHHHHHHHc
Confidence 57899999 57799999999999999999986543211110 1111 1233332 44555554444332
Q ss_pred -CCCEEEeCCC
Q 009323 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 102 g~iD~lvnnAg 112 (277)
T 3gvc_A 102 GGVDKLVANAG 112 (277)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6999886654
No 215
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=83.11 E-value=3 Score=39.83 Aligned_cols=75 Identities=13% Similarity=0.071 Sum_probs=47.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+.+...... .+.+ ..+.+ +..+.+.+.+++++.
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL-------DVTDGERIDVVAADVLARY 77 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEe-------eCCCHHHHHHHHHHHHHhC
Confidence 57899999 578999999999999999998865433211111 1111 22333 244555555555443
Q ss_pred -CCCEEEeCCC
Q 009323 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~p~~g 152 (537)
++|.|+-.-|
T Consensus 78 g~id~lv~~Ag 88 (281)
T 3m1a_A 78 GRVDVLVNNAG 88 (281)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7999886644
No 216
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=83.03 E-value=4.2 Score=39.44 Aligned_cols=108 Identities=18% Similarity=0.094 Sum_probs=58.8
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEE-EEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCV-AVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv-~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
.+||+|+|. |..+..+++.+++.|++++ .+ ++... ........+ |.+++++. ++..+|+++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~V--nP~~~--g~~i~G~~v----------y~sl~el~---~~~~~Dv~I 69 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGV--TPGKG--GMEVLGVPV----------YDTVKEAV---AHHEVDASI 69 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE--CTTCT--TCEETTEEE----------ESSHHHHH---HHSCCSEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEE--CCCCC--CceECCEEe----------eCCHHHHh---hcCCCCEEE
Confidence 368999996 8889999999999999854 44 33221 011112111 44544443 345688776
Q ss_pred eCCCcccccHHHHHHHHHCCCc-e-eCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 149 PGYGFLAENAVFVEMCREHGIN-F-IGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~-~-~Gp~~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
-..-. .......+.+.+.|++ + +... . + ...+....++.+++.|+.+
T Consensus 70 i~vp~-~~~~~~~~ea~~~Gi~~vVi~t~-G-~-~~~~~~~l~~~a~~~gi~v 118 (288)
T 1oi7_A 70 IFVPA-PAAADAALEAAHAGIPLIVLITE-G-I-PTLDMVRAVEEIKALGSRL 118 (288)
T ss_dssp ECCCH-HHHHHHHHHHHHTTCSEEEECCS-C-C-CHHHHHHHHHHHHHHTCEE
T ss_pred EecCH-HHHHHHHHHHHHCCCCEEEEECC-C-C-CHHHHHHHHHHHHHcCCEE
Confidence 42211 0124455566667776 2 2221 0 0 0012455666777777743
No 217
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=83.02 E-value=3.1 Score=38.86 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=29.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCC
Confidence 47899999 5889999999999999999998654
No 218
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=82.97 E-value=4.4 Score=37.76 Aligned_cols=103 Identities=15% Similarity=0.116 Sum_probs=60.7
Q ss_pred EEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeCCC
Q 009323 73 KILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 73 kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~~g 152 (537)
||.|+|.|.++..+++.+.+.|++++.++. .+... +. . |.+.+++++ .++|+|+-...
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d-~~~~~------~~-~----------~~~~~~l~~----~~~DvVv~~~~ 59 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILD-VRGEH------EK-M----------VRGIDEFLQ----REMDVAVEAAS 59 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEEC-SSCCC------TT-E----------ESSHHHHTT----SCCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEe-cCcch------hh-h----------cCCHHHHhc----CCCCEEEECCC
Confidence 799999999999999999989999876652 22211 11 1 445555543 57999996543
Q ss_pred cccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCC
Q 009323 153 FLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 153 ~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gip 198 (537)
.. ........+.+.|..++--++-......-...+.+.+++.|+.
T Consensus 60 ~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 60 QQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 11 1233444555678776654432211100013455566677765
No 219
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=82.96 E-value=7.3 Score=38.39 Aligned_cols=87 Identities=11% Similarity=0.023 Sum_probs=55.5
Q ss_pred CCCCcEEEEEcCcHHHH-HHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009323 68 TCRQEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 68 ~~~~~kvLi~g~g~~a~-~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d 145 (537)
.|.+.||.|+|.|.++. ..++++++. +++++++. +.+.... . ...|.+.+++++- ...+|
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~-d~~~~~~-----g----------~~~~~~~~~ll~~--~~~vD 83 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATA-SRHGTVE-----G----------VNSYTTIEAMLDA--EPSID 83 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEE-CSSCCCT-----T----------SEEESSHHHHHHH--CTTCC
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEE-eCChhhc-----C----------CCccCCHHHHHhC--CCCCC
Confidence 33345899999999998 689999886 77888776 3332211 1 1125666666542 15799
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCceeC
Q 009323 146 MLHPGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 146 ~V~p~~g~~se~~~~a~~~e~~gi~~~G 173 (537)
+|+-... .......+..+.+.|+.++.
T Consensus 84 ~V~i~tp-~~~H~~~~~~al~aGkhVl~ 110 (330)
T 4ew6_A 84 AVSLCMP-PQYRYEAAYKALVAGKHVFL 110 (330)
T ss_dssp EEEECSC-HHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCC-cHHHHHHHHHHHHcCCcEEE
Confidence 9986542 11235666667778887663
No 220
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=82.92 E-value=4.2 Score=39.79 Aligned_cols=73 Identities=4% Similarity=-0.057 Sum_probs=45.5
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcC-------CCEEEEecCCCCCChhhhccCE--EEEcCCCCCCCCCCCHHHHHHHH
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMG-------IPCVAVYSTIDKDALHVKLADE--SVCIGEAPSSQSYLLIPNVLSAA 139 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G-------~~vv~v~~~~d~~~~~~~~ad~--~~~i~~~~~~~~~~~~~~i~~~a 139 (537)
+.|+|||.| .|-++..+++.+.+.| ++|++++........ ..... .+.. +..+.+.+.++.
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~~-------Dl~d~~~~~~~~ 83 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARAA-------DLSAPGEAEKLV 83 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEEC-------CTTSTTHHHHHH
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEEc-------CCCCHHHHHHHH
Confidence 356899999 6899999999999999 788888654332111 01112 2222 233344454444
Q ss_pred HHcCCCEEEeCCC
Q 009323 140 ISRGCTMLHPGYG 152 (537)
Q Consensus 140 ~~~~~d~V~p~~g 152 (537)
. .++|.|+-.-+
T Consensus 84 ~-~~~d~vih~A~ 95 (342)
T 2hrz_A 84 E-ARPDVIFHLAA 95 (342)
T ss_dssp H-TCCSEEEECCC
T ss_pred h-cCCCEEEECCc
Confidence 3 47999886544
No 221
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=82.91 E-value=3 Score=37.45 Aligned_cols=61 Identities=13% Similarity=0.109 Sum_probs=44.4
Q ss_pred EEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEEEeC
Q 009323 73 KILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTMLHPG 150 (537)
Q Consensus 73 kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~d~V~p~ 150 (537)
|+||.| .|.++..+++.+. .|++|++++.+.+ .+.. +..+.+.+.++.++. ++|.|+-.
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~-------D~~~~~~~~~~~~~~~~~d~vi~~ 65 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTV-------DITNIDSIKKMYEQVGKVDAIVSA 65 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEEC-------CTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceee-------ecCCHHHHHHHHHHhCCCCEEEEC
Confidence 799999 5789999999999 9999999865432 2333 255666777666654 58988865
Q ss_pred CC
Q 009323 151 YG 152 (537)
Q Consensus 151 ~g 152 (537)
-|
T Consensus 66 ag 67 (202)
T 3d7l_A 66 TG 67 (202)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 222
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.75 E-value=8.8 Score=36.47 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=31.5
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.....|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 3344468999999 5779999999999999999998654
No 223
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.74 E-value=1.7 Score=41.47 Aligned_cols=35 Identities=6% Similarity=-0.014 Sum_probs=29.8
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.+.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457899999 5789999999999999999998654
No 224
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=82.62 E-value=1.3 Score=43.93 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=49.2
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCC-HHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLL-IPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~-~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|. +|+++..+.+......+++|..+.. . + .+ .+.+.++. ..++|.|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~----~--~-~~~~~~~~~~~-~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNP----L--E-EDLLEVVRRVT-GSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECT----T--T-SCHHHHHHHHH-SSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCc----C--c-cCHHHHHHHhc-CCCCCEE
Confidence 45789999999999999999999999 8998864433222222235655421 1 1 12 33444444 4579999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-..|
T Consensus 236 id~~g 240 (343)
T 2dq4_A 236 LEFSG 240 (343)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 97665
No 225
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=82.59 E-value=1.2 Score=40.79 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=28.5
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecC
Q 009323 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|||||.|+ |.++..+++.+.+.|++|+++..+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 37999995 999999999999999999998654
No 226
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=82.49 E-value=1.5 Score=41.77 Aligned_cols=33 Identities=3% Similarity=-0.054 Sum_probs=30.2
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
|+.+|+|+|+|..+..++..+++.|++++++..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 457899999999999999999999999999964
No 227
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=82.47 E-value=2.2 Score=40.28 Aligned_cols=34 Identities=12% Similarity=0.045 Sum_probs=28.9
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999988644
No 228
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=82.38 E-value=3.1 Score=40.21 Aligned_cols=68 Identities=13% Similarity=0.055 Sum_probs=48.4
Q ss_pred EEEEEc-CcHHHHHHHHHHHHc--CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 73 KILVAN-RGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 73 kvLi~g-~g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
||||.| .|.++..+++.+.+. |++|++++....... .-+.+.. +..+.+.+.+++++.++|.|+-
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~-------D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITL-------DVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEEC-------CTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEe-------cCCCHHHHHHHHhhcCCcEEEE
Confidence 589999 588999999999998 899998864432211 1123332 3567778888887778999986
Q ss_pred CCC
Q 009323 150 GYG 152 (537)
Q Consensus 150 ~~g 152 (537)
.-+
T Consensus 69 ~a~ 71 (317)
T 3ajr_A 69 LAG 71 (317)
T ss_dssp CCC
T ss_pred CCc
Confidence 544
No 229
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=82.29 E-value=2.7 Score=39.67 Aligned_cols=75 Identities=11% Similarity=0.081 Sum_probs=46.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+..... ..+.. ..+.. +..+.+.+.+++++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQM-------DVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-------CTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEe-------eCCCHHHHHHHHHHHHHHc
Confidence 47899999 57899999999999999999886443211110 11111 22332 244555555444432
Q ss_pred -CCCEEEeCCC
Q 009323 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 81 g~id~lv~~Ag 91 (259)
T 4e6p_A 81 GGLDILVNNAA 91 (259)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6998886644
No 230
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=82.12 E-value=1.9 Score=42.70 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=51.3
Q ss_pred CCCcEEEEEcCc-HHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVANRG-EIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g~g-~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.| .++..+++.|+.+|.+|++++.+.+......++ +|..+... +....+.+.++....++|.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~------~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTS------TAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCC------cccHHHHHHHHhCCCCCcE
Confidence 346799999976 899999999999999999887555433333333 45544321 1122345555544457999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 217 vid~~g 222 (340)
T 3gms_A 217 AIDSIG 222 (340)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 996655
No 231
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.08 E-value=2.6 Score=39.10 Aligned_cols=35 Identities=11% Similarity=0.298 Sum_probs=30.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 38 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN 38 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 47899999 578999999999999999999876544
No 232
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=81.94 E-value=5.2 Score=38.25 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=29.6
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 66 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHS 66 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999 57899999999999999999987544
No 233
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=81.91 E-value=1.3 Score=44.44 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=49.6
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|.+|+++....+...... ++ +|..+. +.+.+.+.++. .++|.|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~---------~~~~~~~~~~~--~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLV---------SRDQEQMQAAA--GTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEE---------TTCHHHHHHTT--TCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEe---------ccCHHHHHHhh--CCCCEE
Confidence 467999999999999999999999999888865443322222 22 455443 33444454443 379999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-..|.
T Consensus 256 id~~g~ 261 (366)
T 1yqd_A 256 IDTVSA 261 (366)
T ss_dssp EECCSS
T ss_pred EECCCc
Confidence 977664
No 234
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=81.88 E-value=1.6 Score=43.88 Aligned_cols=78 Identities=18% Similarity=0.198 Sum_probs=52.2
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
...++|||.|.|.++..+++.|+.+|.+|+++..+.+......++ +|..+. . +.....+.+.++....++|.|
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~-----~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGIN-R-----LEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEE-T-----TTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEc-C-----CcccHHHHHHHHhCCCCceEE
Confidence 346799999999999999999999999999886543322222223 455553 1 111224556666555689999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-..|
T Consensus 262 id~~g 266 (363)
T 3uog_A 262 LEIAG 266 (363)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 97666
No 235
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=81.86 E-value=2.7 Score=44.13 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=60.6
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc----cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL----ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~----ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
.||+.|.+.+.....+++.++++|.+++.+.+.........++ .+..+.++ ..|...+.+.+++.++|.
T Consensus 348 GKrv~i~g~~~~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~~~~~~~i~~-------~~d~~el~~~i~~~~pDL 420 (492)
T 3u7q_A 348 GKRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYD-------DVTGYEFEEFVKRIKPDL 420 (492)
T ss_dssp TCEEEECBSSSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTTSCTTCEEEE-------SCBHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHhCCCCcEEEc-------CCCHHHHHHHHHhcCCcE
Confidence 5899999888889999999999999999876543211111111 12222221 246788999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcee
Q 009323 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 147 V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
++.+. .-...++++|+|++
T Consensus 421 ~ig~~-------~~~~ia~k~gIP~~ 439 (492)
T 3u7q_A 421 IGSGI-------KEKFIFQKMGIPFR 439 (492)
T ss_dssp EEECH-------HHHHHHHHTTCCEE
T ss_pred EEeCc-------chhHHHHHcCCCEE
Confidence 99532 23456778899886
No 236
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=81.79 E-value=1.8 Score=43.61 Aligned_cols=132 Identities=9% Similarity=0.064 Sum_probs=79.8
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCE--EEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADE--SVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~--~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
.+||+|+|.|.++..+++.+.+. +++.+.+.+.+. ...+++. .+.++ ..+.+.+.++++ ++|+|+
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~---a~~la~~~~~~~~d-------~~~~~~l~~ll~--~~DvVI 82 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNEN---LEKVKEFATPLKVD-------ASNFDKLVEVMK--EFELVI 82 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHH---HHHHTTTSEEEECC-------TTCHHHHHHHHT--TCSCEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHH---HHHHHhhCCeEEEe-------cCCHHHHHHHHh--CCCEEE
Confidence 47999999999999999999888 777766433221 1223322 22232 345667777764 589998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHH--HHHHHHhC
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEA--VKLADELG 221 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~--~~~~~~ig 221 (537)
....+. ....+...+.+.|..++-.+.. ..+-..+.+.++++|+...+.. ...-....+ ...+++++
T Consensus 83 n~~P~~-~~~~v~~a~l~~G~~~vD~s~~----~~~~~~l~~~Ak~aG~~~l~g~-G~dPG~~~~~a~~~~~~~~ 151 (365)
T 2z2v_A 83 GALPGF-LGFKSIKAAIKSKVDMVDVSFM----PENPLELRDEAEKAQVTIVFDA-GFAPGLSNILMGRIFQELD 151 (365)
T ss_dssp ECCCHH-HHHHHHHHHHHTTCCEEECCCC----SSCGGGGHHHHHHTTCEEECSC-BTTTBHHHHHHHHHHHHSC
T ss_pred ECCChh-hhHHHHHHHHHhCCeEEEccCC----cHHHHHHHHHHHHcCCEEEECC-CCcchHHHHHHHHHHHhcC
Confidence 764321 2345667777888887643321 1111345667889999876653 233333333 33455666
No 237
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=81.75 E-value=0.55 Score=46.72 Aligned_cols=148 Identities=13% Similarity=0.021 Sum_probs=82.9
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCC-CCC-hhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID-KDA-LHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d-~~~-~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
|+.||.|+|.|.++...++++ ..+++++++..... ... .....+.+ + + .....|.+.+++++ ...+|+|
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~-~--~--~~~~~~~~~~~ll~---~~~vD~V 71 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISE-M--N--IKPKKYNNWWEMLE---KEKPDIL 71 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHT-T--T--CCCEECSSHHHHHH---HHCCSEE
T ss_pred CceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHH-c--C--CCCcccCCHHHHhc---CCCCCEE
Confidence 457999999888877888887 67888888763221 121 11111111 0 0 00123677777765 3579999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCC--CCC-CcCccCCCHHHHHHHHH--HhCC
Q 009323 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP--TVP-GSDGLLQSTEEAVKLAD--ELGF 222 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gip--vp~-~~~~~~~s~~~~~~~~~--~ig~ 222 (537)
+-..- .......+..+.+.|+.++.-.|-+. ...+=..+.+++++.|+. .-. +..+.......+++.++ .+|-
T Consensus 72 ~I~tp-~~~H~~~~~~al~aGkhVl~EKPla~-~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~ 149 (337)
T 3ip3_A 72 VINTV-FSLNGKILLEALERKIHAFVEKPIAT-TFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVSEGAVGE 149 (337)
T ss_dssp EECSS-HHHHHHHHHHHHHTTCEEEECSSSCS-SHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHHHHTTTSS
T ss_pred EEeCC-cchHHHHHHHHHHCCCcEEEeCCCCC-CHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHHhcCCccc
Confidence 86532 11235666777788987764332222 112233455567788877 212 21123334556666666 5777
Q ss_pred cEEEEe
Q 009323 223 PVMIKA 228 (537)
Q Consensus 223 PvvvKp 228 (537)
+..+..
T Consensus 150 i~~i~~ 155 (337)
T 3ip3_A 150 IRLVNT 155 (337)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 776664
No 238
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=81.73 E-value=1.3 Score=45.64 Aligned_cols=35 Identities=6% Similarity=0.061 Sum_probs=29.7
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|.++|+|+|+|..+..++..|.+.|++|+++...
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCC
Confidence 35679999999999999999999999999999643
No 239
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=81.71 E-value=2.6 Score=39.96 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=28.1
Q ss_pred CCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEe
Q 009323 67 VTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 67 ~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
...|.|++||.| .+.++..+++.+.+.|++++++.
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~ 57 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHY 57 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 344568899999 57799999999999999997765
No 240
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=81.70 E-value=5.7 Score=39.15 Aligned_cols=73 Identities=11% Similarity=-0.024 Sum_probs=48.3
Q ss_pred EEEEEc-CcHHHHHHHHHHHHc-CCCEEEEecCCCCCC-hhh-hcc---C-EEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009323 73 KILVAN-RGEIAVRVIRTAHEM-GIPCVAVYSTIDKDA-LHV-KLA---D-ESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 73 kvLi~g-~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~-~~~-~~a---d-~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 144 (537)
||||.| .|.+|..+++.+.+. |++|++++....... ... .+. . +.+.. +..+.+.+.+++++.++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 74 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHA-------DICDSAEITRIFEQYQP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHHHHHCC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEEC-------CCCCHHHHHHHHhhcCC
Confidence 799999 589999999999998 799998864331111 111 110 1 22222 35677788888776689
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.|+-.-+
T Consensus 75 d~vih~A~ 82 (361)
T 1kew_A 75 DAVMHLAA 82 (361)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99886544
No 241
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=81.60 E-value=2.3 Score=41.01 Aligned_cols=77 Identities=14% Similarity=0.145 Sum_probs=51.1
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc-C
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR-G 143 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~-~ 143 (537)
...|++||.| .+.++..+++.+.+.|++|++++.+.+..... ..+.. ..+.+ +..+.+.+.+++++. +
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~v~~~~~~~~~ 86 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVREL-------DLQDLSSVRRFADGVSG 86 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEEC-------CTTCHHHHHHHHHTCCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEc-------CCCCHHHHHHHHHhcCC
Confidence 3357899999 57899999999999999999986543211111 11111 22332 356777888887765 6
Q ss_pred CCEEEeCCC
Q 009323 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~p~~g 152 (537)
+|.++-.-|
T Consensus 87 iD~lv~nAg 95 (291)
T 3rd5_A 87 ADVLINNAG 95 (291)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCc
Confidence 888886644
No 242
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=81.44 E-value=15 Score=34.50 Aligned_cols=116 Identities=8% Similarity=0.052 Sum_probs=62.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEE----cCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVC----IGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~----i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
.++|+|+|.|..+..+++.+.+.|+..+.+. |.|.... ..+..+.+. ++ ....+.+.+.+++.+.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lv-D~d~v~~-sNL~Rq~l~~~~diG-------~~Ka~~~~~~l~~~np~~ 98 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLA-DDDDVHL-SNLQRQILFTTEDID-------RPKSQVSQQRLTQLNPDI 98 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEE-CCCBCCG-GGTTTCTTCCGGGTT-------SBHHHHHHHHHHHHCTTS
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEE-eCCCccc-ccCCCCccCChhhCC-------CHHHHHHHHHHHHHCCCC
Confidence 4689999999999999999999999765443 3343221 111111110 11 123455556666655442
Q ss_pred EEeC-CCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCC
Q 009323 147 LHPG-YGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVP 201 (537)
Q Consensus 147 V~p~-~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~ 201 (537)
-+-. ...+.+ ..+.+.+....+.+-..+. .. .|....+.+.+.++|...
T Consensus 99 ~v~~~~~~~~~-~~~~~~~~~~DvVi~~~d~--~~---~r~~l~~~~~~~~~p~i~ 148 (251)
T 1zud_1 99 QLTALQQRLTG-EALKDAVARADVVLDCTDN--MA---TRQEINAACVALNTPLIT 148 (251)
T ss_dssp EEEEECSCCCH-HHHHHHHHHCSEEEECCSS--HH---HHHHHHHHHHHTTCCEEE
T ss_pred EEEEEeccCCH-HHHHHHHhcCCEEEECCCC--HH---HHHHHHHHHHHhCCCEEE
Confidence 2211 111211 2344555666655433221 11 255666677788887654
No 243
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=81.41 E-value=1.5 Score=44.83 Aligned_cols=79 Identities=14% Similarity=0.203 Sum_probs=51.4
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.|.++..+++.|+.+|. +|++++...+......++ +|..+.. . +....+.+.++....++|.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~----~--~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP----T--KENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT----T--TSCHHHHHHHHTTTCCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcC----C--CCCHHHHHHHHhCCCCCCE
Confidence 446799999999999999999999999 677774333322222233 5554421 1 1122455555555568999
Q ss_pred EEeCCCc
Q 009323 147 LHPGYGF 153 (537)
Q Consensus 147 V~p~~g~ 153 (537)
|+-..|.
T Consensus 286 vid~~g~ 292 (404)
T 3ip1_A 286 FLEATGV 292 (404)
T ss_dssp EEECSSC
T ss_pred EEECCCC
Confidence 9977664
No 244
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=81.24 E-value=3.2 Score=39.75 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=45.7
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
|||||.|+ |.+|..+++.+. .|++|+++..... .+. -+..+.+.+.++.+..++|+|+-.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~-------~D~~d~~~~~~~~~~~~~d~vih~ 61 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFC-------GDFSNPKGVAETVRKLRPDVIVNA 61 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSC-------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------ccc-------ccCCCHHHHHHHHHhcCCCEEEEC
Confidence 37999995 999999999999 8999999853321 111 135567778777776689998865
Q ss_pred CC
Q 009323 151 YG 152 (537)
Q Consensus 151 ~g 152 (537)
-+
T Consensus 62 a~ 63 (299)
T 1n2s_A 62 AA 63 (299)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 245
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=81.18 E-value=3.7 Score=38.39 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=47.7
Q ss_pred CcEEEEE--cCcHHHHHHHHHHHHc--CCCEEEEecCCCCCChhhhccC----EEEEcCCCCCCCCCCC----HHHHHHH
Q 009323 71 QEKILVA--NRGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLAD----ESVCIGEAPSSQSYLL----IPNVLSA 138 (537)
Q Consensus 71 ~~kvLi~--g~g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~~~~~~ad----~~~~i~~~~~~~~~~~----~~~i~~~ 138 (537)
++||+|+ |.|..+..+++++.+. ++++++|.++.+ .......|. ..+.+.+ .++.+ -+++++.
T Consensus 22 ~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~-~~~~~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~ 96 (229)
T 3auf_A 22 MIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRA-DAYGLERARRAGVDALHMDP----AAYPSRTAFDAALAER 96 (229)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESST-TCHHHHHHHHTTCEEEECCG----GGSSSHHHHHHHHHHH
T ss_pred CcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCC-chHHHHHHHHcCCCEEEECc----ccccchhhccHHHHHH
Confidence 3688888 8999999999999876 668877766533 222233332 1222221 22332 3567888
Q ss_pred HHHcCCCEEEeC
Q 009323 139 AISRGCTMLHPG 150 (537)
Q Consensus 139 a~~~~~d~V~p~ 150 (537)
+++.++|.|+..
T Consensus 97 l~~~~~Dliv~a 108 (229)
T 3auf_A 97 LQAYGVDLVCLA 108 (229)
T ss_dssp HHHTTCSEEEES
T ss_pred HHhcCCCEEEEc
Confidence 888999987753
No 246
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=81.17 E-value=2.6 Score=40.29 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=28.5
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 61 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATT 61 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5779999999999999999988654
No 247
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=81.17 E-value=1.6 Score=43.81 Aligned_cols=32 Identities=9% Similarity=0.030 Sum_probs=29.2
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
+||+|+|+|..+.-++..|++.|++|+++..+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecC
Confidence 58999999999999999999999999999543
No 248
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=81.09 E-value=4 Score=38.52 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=46.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLA--DESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~a--d~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+.+..... ..+. -..+.. +..+.+.+.+++++.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEV-------DVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEE-------eCCCHHHHHHHHHHHHHHc
Confidence 47899999 57899999999999999999886443211100 0111 122333 244555555444432
Q ss_pred -CCCEEEeCCC
Q 009323 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 85 g~iD~lv~~Ag 95 (263)
T 3ak4_A 85 GGFDLLCANAG 95 (263)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6999886654
No 249
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=81.08 E-value=2.7 Score=42.21 Aligned_cols=143 Identities=9% Similarity=0.026 Sum_probs=82.5
Q ss_pred CcEEEEEcCcHHHHH-HHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~-ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+|.|.++.. .++.+++. +++++++. +.+.......+. ....|.+.+++++ ...+|+|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~~~~~~~~----------~~~~~~~~~~ll~---~~~~D~V~ 72 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVA-SRDEEKVKRDLP----------DVTVIASPEAAVQ---HPDVDLVV 72 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEE-CSCHHHHHHHCT----------TSEEESCHHHHHT---CTTCSEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEE-cCCHHHHHhhCC----------CCcEECCHHHHhc---CCCCCEEE
Confidence 358999999999986 77888876 78888775 333211111111 1123566666653 45799998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC-ccCCCHHHHHHHHH--HhCCcEE
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--ELGFPVM 225 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~-~~~~s~~~~~~~~~--~ig~Pvv 225 (537)
-.... ......+..+.+.|+.++.-.|-+. ...+=..+.+.+++.|+..--++. +.......+++.++ .+|-+..
T Consensus 73 i~tp~-~~H~~~~~~al~aGk~Vl~EKPla~-~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 150 (364)
T 3e82_A 73 IASPN-ATHAPLARLALNAGKHVVVDKPFTL-DMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAVKH 150 (364)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHTTTCSEEE
T ss_pred EeCCh-HHHHHHHHHHHHCCCcEEEeCCCcC-CHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcCCCcceEE
Confidence 65421 2335666777788987764322111 111223455567888887643321 12223455666665 5777777
Q ss_pred EEec
Q 009323 226 IKAT 229 (537)
Q Consensus 226 vKp~ 229 (537)
+...
T Consensus 151 ~~~~ 154 (364)
T 3e82_A 151 FESH 154 (364)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 250
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=81.06 E-value=6.5 Score=36.44 Aligned_cols=75 Identities=12% Similarity=0.070 Sum_probs=47.0
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH--cCCCEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS--RGCTML 147 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~--~~~d~V 147 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+. ....+.-..+..+ ..+ .+.+.+++.+.+ .++|.+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~D----~~~-~~~~~~~~~~~~~~g~id~l 74 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGAVPLPTD----LEK-DDPKGLVKRALEALGGLHVL 74 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTCEEEECC----TTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCcEEEecC----Cch-HHHHHHHHHHHHHcCCCCEE
Confidence 47899999 5789999999999999999998654432 1111111223322 122 455555554432 269988
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+..-|
T Consensus 75 v~~Ag 79 (239)
T 2ekp_A 75 VHAAA 79 (239)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86544
No 251
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=81.05 E-value=2.6 Score=40.50 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=29.3
Q ss_pred CcEEEEEcC---cHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g~---g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.|+ +.++..+++.+.+.|++|++++.+.
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 478999996 5899999999999999999986543
No 252
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=81.05 E-value=1.7 Score=42.04 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=30.3
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
|+++|||.|+ |.+|..+++.+.+.|++|+++....
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 4689999996 9999999999999999999986543
No 253
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.04 E-value=2.3 Score=40.71 Aligned_cols=35 Identities=6% Similarity=0.061 Sum_probs=29.7
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.+.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457899999 5789999999999999999998654
No 254
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=81.02 E-value=7.1 Score=38.17 Aligned_cols=73 Identities=11% Similarity=-0.028 Sum_probs=47.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHc--CCCEEEEecCCCCCC-hh-hhcc--C-EEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEM--GIPCVAVYSTIDKDA-LH-VKLA--D-ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~-~~-~~~a--d-~~~~i~~~~~~~~~~~~~~i~~~a~~~ 142 (537)
||+|||.| .|.+|..+++.+.+. |++|++++....... .. ..+. . +.+.. +..+.+.+.++++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~-- 74 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVG-------DIADAELVDKLAA-- 74 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEEC-------CTTCHHHHHHHHT--
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEEC-------CCCCHHHHHHHhh--
Confidence 47999999 589999999999998 899998865432111 11 1111 1 12222 3556677777764
Q ss_pred CCCEEEeCCC
Q 009323 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~p~~g 152 (537)
++|.|+-.-+
T Consensus 75 ~~d~vih~A~ 84 (348)
T 1oc2_A 75 KADAIVHYAA 84 (348)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEECCc
Confidence 4798886544
No 255
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=81.01 E-value=3 Score=39.80 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=29.2
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999988644
No 256
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=80.99 E-value=11 Score=35.83 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=31.0
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.....|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 3334468999999 5779999999999999999998754
No 257
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=80.99 E-value=2.7 Score=41.51 Aligned_cols=73 Identities=8% Similarity=-0.165 Sum_probs=49.1
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHcC-----CCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcC-C
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEMG-----IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRG-C 144 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~G-----~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~-~ 144 (537)
|+|||.| .|-+|..+++.+.+.| ++|+++......... ....-+.+.. +..+.+.+.++.+..+ +
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~-~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~~ 73 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH-EDNPINYVQC-------DISDPDDSQAKLSPLTDV 73 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCC-CSSCCEEEEC-------CTTSHHHHHHHHTTCTTC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcccc-ccCceEEEEe-------ecCCHHHHHHHHhcCCCC
Confidence 5899999 5999999999999999 999988755433220 0001123332 3566777777776554 8
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.|+-.-+
T Consensus 74 d~vih~a~ 81 (364)
T 2v6g_A 74 THVFYVTW 81 (364)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98886544
No 258
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=80.97 E-value=1.9 Score=41.64 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=29.3
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
|||||.|+ |-+|..+++.+.+.|++|+++..++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 58999996 9999999999999999999986543
No 259
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=80.90 E-value=5.7 Score=43.50 Aligned_cols=75 Identities=15% Similarity=0.064 Sum_probs=51.0
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hc----cC--EEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL----AD--ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~----ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~ 142 (537)
.|+|||.| .|-++..+++.+.+.|++|+++........... .+ .. +.+.. +..+.+.+.++++..
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~-------Dl~d~~~l~~~~~~~ 83 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEV-------DLCDRKGLEKVFKEY 83 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEEC-------CTTCHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEc-------CCCCHHHHHHHHHhC
Confidence 57999999 589999999999999999999865433221110 00 01 22322 356677787777766
Q ss_pred CCCEEEeCCC
Q 009323 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~p~~g 152 (537)
++|+|+-.-+
T Consensus 84 ~~D~Vih~A~ 93 (699)
T 1z45_A 84 KIDSVIHFAG 93 (699)
T ss_dssp CCCEEEECCS
T ss_pred CCCEEEECCc
Confidence 8999886644
No 260
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=80.88 E-value=5.3 Score=39.73 Aligned_cols=71 Identities=17% Similarity=0.186 Sum_probs=46.5
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhcc---CEEEEcCCCCCCCC-CCCHHHHHHHHHHcCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLA---DESVCIGEAPSSQS-YLLIPNVLSAAISRGCT 145 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~a---d~~~~i~~~~~~~~-~~~~~~i~~~a~~~~~d 145 (537)
.|+|||.| .|.++..+++.+.+.|++|+++..+.+... ...+. .-.+..+ + ..|.+.+.++.+ ++|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~l~~~~~v~~v~~------D~l~d~~~l~~~~~--~~d 75 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-AEELQAIPNVTLFQG------PLLNNVPLMDTLFE--GAH 75 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-HHHHHTSTTEEEEES------CCTTCHHHHHHHHT--TCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-HHHHhhcCCcEEEEC------CccCCHHHHHHHHh--cCC
Confidence 46899999 599999999999999999999865443210 01111 1112111 3 456777777663 589
Q ss_pred EEEeC
Q 009323 146 MLHPG 150 (537)
Q Consensus 146 ~V~p~ 150 (537)
.|+-.
T Consensus 76 ~Vi~~ 80 (352)
T 1xgk_A 76 LAFIN 80 (352)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88844
No 261
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=80.81 E-value=3 Score=38.72 Aligned_cols=75 Identities=20% Similarity=0.123 Sum_probs=48.8
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL-ADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~d~ 146 (537)
.|++||.|+ |.++..+++.+.+.|++|+++..+.+..... ..+ ..+.+.. +..+.+.+.++.++. ++|.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV-------DLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHTTCCCCCE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEE-------eCCCHHHHHHHHHHcCCCCE
Confidence 478999995 8899999999999999999886443211100 011 1233333 355677777776654 5898
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-.-|
T Consensus 80 vi~~Ag 85 (244)
T 3d3w_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886544
No 262
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=80.75 E-value=3.1 Score=39.54 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999988654
No 263
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=80.74 E-value=9.3 Score=37.40 Aligned_cols=99 Identities=11% Similarity=-0.025 Sum_probs=52.7
Q ss_pred cEEEEEcCcHH-----HHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCC------------CCCHH
Q 009323 72 EKILVANRGEI-----AVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQS------------YLLIP 133 (537)
Q Consensus 72 ~kvLi~g~g~~-----a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~------------~~~~~ 133 (537)
+|||++..+.. ...+++++++.|++|.++............. --..+.+........ .....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWR 86 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHHHH
Confidence 68998865432 3478899999999999887543211111111 112333321111000 00234
Q ss_pred HHHHHHHHcCCCEEEeCCCcccccHHHHHHHHHCCCcee
Q 009323 134 NVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 134 ~i~~~a~~~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
.+.+++++.++|.||....+. ......++...|++++
T Consensus 87 ~l~~~l~~~~pDvv~~~~~~~--~~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 87 QARAIMKAYKPDVVLGMGGYV--SGPGGLAAWSLGIPVV 123 (364)
T ss_dssp HHHHHHHHHCCSEEEECSSTT--HHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhcCCCEEEEeCCcC--chHHHHHHHHcCCCEE
Confidence 566777888999999753321 1122334455677765
No 264
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=80.64 E-value=3.1 Score=39.49 Aligned_cols=70 Identities=17% Similarity=0.043 Sum_probs=46.5
Q ss_pred EEEEEcC-cHHHHHHHHHHHHc--CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 73 KILVANR-GEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 73 kvLi~g~-g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
+|||.|+ |.+|..+++.+.+. |++|+++..+.+.........-+.+.. +..|.+.+.++.+ ++|.|+-
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQA-------DYGDEAALTSALQ--GVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEEC-------CTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEc-------CCCCHHHHHHHHh--CCCEEEE
Confidence 5899995 99999999999998 999999875543221111111123332 3667777777664 5898885
Q ss_pred CC
Q 009323 150 GY 151 (537)
Q Consensus 150 ~~ 151 (537)
.-
T Consensus 72 ~a 73 (286)
T 2zcu_A 72 IS 73 (286)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 265
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=80.62 E-value=4.1 Score=39.08 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=30.6
Q ss_pred CcCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 65 LKVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 65 ~~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.+...+.|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 45666678999999 578999999999999999998853
No 266
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=80.54 E-value=2 Score=40.40 Aligned_cols=88 Identities=7% Similarity=0.002 Sum_probs=54.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH-cCCCEEE-
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS-RGCTMLH- 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~-~~~d~V~- 148 (537)
.+||.|+|.|.++..+++.+++.|++|+.++... ...-+| .+.++ ...+..+++-+.. .+.+.++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~-----~~~~aD-ilavP-------~~ai~~vl~~l~~~l~~g~ivv 72 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE-----DIRDFE-LVVID-------AHGVEGYVEKLSAFARRGQMFL 72 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG-----GGGGCS-EEEEC-------SSCHHHHHHHHHTTCCTTCEEE
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH-----HhccCC-EEEEc-------HHHHHHHHHHHHHhcCCCCEEE
Confidence 4689999999999999999999999988875421 245678 77774 2245555544432 2344333
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~G 173 (537)
-..|.... ...+.+...|..|++
T Consensus 73 d~sgs~~~--~vl~~~~~~g~~fvg 95 (232)
T 3dfu_A 73 HTSLTHGI--TVMDPLETSGGIVMS 95 (232)
T ss_dssp ECCSSCCG--GGGHHHHHTTCEEEE
T ss_pred EECCcCHH--HHHHHHHhCCCcEEE
Confidence 22343221 223334466776664
No 267
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=80.46 E-value=3.1 Score=39.36 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=30.4
Q ss_pred CCCcEEEEEcC-c-HHHHHHHHHHHHcCCCEEEEecCC
Q 009323 69 CRQEKILVANR-G-EIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 69 ~~~~kvLi~g~-g-~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
...|++||.|+ | .++..+++.+.+.|++|++++.+.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 44678999998 6 599999999999999999986543
No 268
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=80.43 E-value=2.9 Score=38.79 Aligned_cols=73 Identities=16% Similarity=0.122 Sum_probs=47.1
Q ss_pred cEEEEE--cCcHHHHHHHHHHHHcCC--CEEEEecCCCCCChhhhccCE----EEEcCCCCCCCCCCC----HHHHHHHH
Q 009323 72 EKILVA--NRGEIAVRVIRTAHEMGI--PCVAVYSTIDKDALHVKLADE----SVCIGEAPSSQSYLL----IPNVLSAA 139 (537)
Q Consensus 72 ~kvLi~--g~g~~a~~ii~aa~~~G~--~vv~v~~~~d~~~~~~~~ad~----~~~i~~~~~~~~~~~----~~~i~~~a 139 (537)
+||+|+ |.|..+..+++++.+.++ ++++|-++.+. ......|.+ .+.+.+ .++.+ -+++++.+
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~-~~~~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~l 76 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPK-AYAIERCKKHNVECKVIQR----KEFPSKKEFEERMALEL 76 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTT-CHHHHHHHHHTCCEEECCG----GGSSSHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCC-hHHHHHHHHcCCCEEEeCc----ccccchhhhhHHHHHHH
Confidence 688888 899999999999998877 77777666432 222333321 222221 22332 35677888
Q ss_pred HHcCCCEEEe
Q 009323 140 ISRGCTMLHP 149 (537)
Q Consensus 140 ~~~~~d~V~p 149 (537)
++.++|.|+.
T Consensus 77 ~~~~~Dliv~ 86 (216)
T 2ywr_A 77 KKKGVELVVL 86 (216)
T ss_dssp HHTTCCEEEE
T ss_pred HhcCCCEEEE
Confidence 8889997775
No 269
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=80.36 E-value=6.6 Score=38.18 Aligned_cols=72 Identities=17% Similarity=-0.033 Sum_probs=46.0
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHcC--CCEEEEecCCCCCC-hh-hhcc---C-EEEEcCCCCCCCCCCCHHHHHHHHHHc
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEMG--IPCVAVYSTIDKDA-LH-VKLA---D-ESVCIGEAPSSQSYLLIPNVLSAAISR 142 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~G--~~vv~v~~~~d~~~-~~-~~~a---d-~~~~i~~~~~~~~~~~~~~i~~~a~~~ 142 (537)
|||||.| .|.+|..+++.+.+.| ++|++++....... .. ..+. . +.+.. +..+.+.+.++. .
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~--~ 74 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKG-------DVADYELVKELV--R 74 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHH--H
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEc-------CCCCHHHHHHHh--h
Confidence 5899999 5999999999999987 88888864321111 11 1111 1 12222 355666776666 5
Q ss_pred CCCEEEeCCC
Q 009323 143 GCTMLHPGYG 152 (537)
Q Consensus 143 ~~d~V~p~~g 152 (537)
++|.|+-.-+
T Consensus 75 ~~d~vih~A~ 84 (336)
T 2hun_A 75 KVDGVVHLAA 84 (336)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999886544
No 270
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=80.31 E-value=3.7 Score=38.71 Aligned_cols=35 Identities=6% Similarity=0.175 Sum_probs=30.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcC---CCEEEEecCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMG---IPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G---~~vv~v~~~~d 105 (537)
+|++||.| .|.++..+++.+.+.| ++|++++.+.+
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~ 59 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE 59 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChh
Confidence 57899999 5889999999999999 99999876544
No 271
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=80.30 E-value=3.1 Score=41.43 Aligned_cols=80 Identities=18% Similarity=0.105 Sum_probs=47.7
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|. +|++++.+.+......++ +|..+... . .+.....+.+.+... .++|.|
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~--~-~~~~~~~~~i~~~~~-~g~D~v 246 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS--K-ESPQEIARKVEGQLG-CKPEVT 246 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECS--S-CCHHHHHHHHHHHHT-SCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCc--c-cccchHHHHHHHHhC-CCCCEE
Confidence 45799999999999999999999999 777775443322222222 45544311 0 000011223333332 579999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-..|.
T Consensus 247 id~~g~ 252 (356)
T 1pl8_A 247 IECTGA 252 (356)
T ss_dssp EECSCC
T ss_pred EECCCC
Confidence 976653
No 272
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=80.15 E-value=4.6 Score=39.76 Aligned_cols=145 Identities=10% Similarity=0.092 Sum_probs=82.0
Q ss_pred CcEEEEEcCcHHHH-HHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANRGEIAV-RVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~g~~a~-~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
+.||.|+|.|.++. ..++.++..|++++++.. .+... ...+++++ + ....|.+.++++ ....+|+|+-
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d-~~~~~-~~~~a~~~---~---~~~~~~~~~~ll---~~~~~D~V~i 72 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFE-SDSDN-RAKFTSLF---P---SVPFAASAEQLI---TDASIDLIAC 72 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEEC-SCTTS-CHHHHHHS---T---TCCBCSCHHHHH---TCTTCCEEEE
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeC-CCHHH-HHHHHHhc---C---CCcccCCHHHHh---hCCCCCEEEE
Confidence 45899999988774 677888778999887763 33221 12222221 0 112366766654 3456999996
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCC-C-HHHHHHHHH--HhCCcEE
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQ-S-TEEAVKLAD--ELGFPVM 225 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~-s-~~~~~~~~~--~ig~Pvv 225 (537)
... .......+..+.+.|..++.-.|-+. ...+=..+.+.+++.|+..--.+..... . ...+++.++ .+|-+..
T Consensus 73 ~tp-~~~h~~~~~~al~aGkhVl~EKP~a~-~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i~~g~iG~i~~ 150 (336)
T 2p2s_A 73 AVI-PCDRAELALRTLDAGKDFFTAKPPLT-TLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQRGEIGRVIQ 150 (336)
T ss_dssp CSC-GGGHHHHHHHHHHTTCEEEECSSCCS-CHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHHHTTTTSSEEE
T ss_pred eCC-hhhHHHHHHHHHHCCCcEEEeCCCCC-CHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHHhCCCCCceEE
Confidence 542 11335666667778887654322111 1112234455677788876443322233 3 566777776 5677766
Q ss_pred EEe
Q 009323 226 IKA 228 (537)
Q Consensus 226 vKp 228 (537)
+..
T Consensus 151 v~~ 153 (336)
T 2p2s_A 151 TMG 153 (336)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 273
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=80.12 E-value=2.6 Score=40.39 Aligned_cols=80 Identities=11% Similarity=0.022 Sum_probs=46.4
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~ 141 (537)
|...+.|++||.| .+.++..+++.+.+.|++|++++.+.+..... ..+.. ..+.. +..+.+.+.+++++
T Consensus 23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~ 95 (272)
T 4dyv_A 23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPT-------DVTDPDSVRALFTA 95 (272)
T ss_dssp -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEEC-------CTTSHHHHHHHHHH
T ss_pred hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEe-------cCCCHHHHHHHHHH
Confidence 3334457899999 57899999999999999999886543211100 11111 22332 24455555554443
Q ss_pred c-----CCCEEEeCCC
Q 009323 142 R-----GCTMLHPGYG 152 (537)
Q Consensus 142 ~-----~~d~V~p~~g 152 (537)
. ++|.++-.-|
T Consensus 96 ~~~~~g~iD~lVnnAg 111 (272)
T 4dyv_A 96 TVEKFGRVDVLFNNAG 111 (272)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 2 7999886654
No 274
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=80.09 E-value=3 Score=41.84 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=36.9
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCC-ChhhhccCEEEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKD-ALHVKLADESVC 119 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~-~~~~~~ad~~~~ 119 (537)
..+++|.|+|..+..+++-++.+|++|+++++.++.. ...+.-+++.+.
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~~~~fp~a~~v~~ 248 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHFFPDADEIIV 248 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGCGGGCTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccccccCCCceEEec
Confidence 4689999999999999999999999999997654422 122334555553
No 275
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=80.09 E-value=2.5 Score=41.06 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=26.3
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHH-cCCCEEEEe
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHE-MGIPCVAVY 101 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~-~G~~vv~v~ 101 (537)
++.||.|+| .|.++..+++++.+ -+++++.+.
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~v 53 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVL 53 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEB
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 346999999 89999999999876 478888775
No 276
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=80.07 E-value=3.1 Score=39.29 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=29.2
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
++|++||.| .+.++..+++.+.+.|++|++++..
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 358899999 5779999999999999999988543
No 277
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=80.04 E-value=1.9 Score=43.58 Aligned_cols=40 Identities=8% Similarity=0.112 Sum_probs=32.3
Q ss_pred CcCCCCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 65 LKVTCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 65 ~~~~~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|..++..+|+|+|+|..+..++..+++.|++|+++....
T Consensus 20 ~M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 20 HMNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp ---CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred cccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3555556799999999999999999999999999996543
No 278
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=80.01 E-value=4.2 Score=40.27 Aligned_cols=91 Identities=10% Similarity=0.086 Sum_probs=56.5
Q ss_pred CcEEEEEcCcHHHHH-HHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~-ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|.||.|+|.|.++.. .+.++++. +.++++|. +.+.. ....+++++= + ...|.+.++++ ....+|+|+
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~-d~~~~-~a~~~a~~~g-~-----~~~y~d~~ell---~~~~iDaV~ 91 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIA-SRDLT-RAREMADRFS-V-----PHAFGSYEEML---ASDVIDAVY 91 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEE-CSSHH-HHHHHHHHHT-C-----SEEESSHHHHH---HCSSCSEEE
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEE-CCCHH-HHHHHHHHcC-C-----CeeeCCHHHHh---cCCCCCEEE
Confidence 569999999999965 67888886 67888776 33321 1223333210 0 01366666665 346799998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~G 173 (537)
-..- .......+..+.+.|..++.
T Consensus 92 I~tP-~~~H~~~~~~al~aGkhVl~ 115 (350)
T 4had_A 92 IPLP-TSQHIEWSIKAADAGKHVVC 115 (350)
T ss_dssp ECSC-GGGHHHHHHHHHHTTCEEEE
T ss_pred EeCC-CchhHHHHHHHHhcCCEEEE
Confidence 6542 12335677777788887764
No 279
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=80.01 E-value=4.1 Score=37.88 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=30.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 57899999 578999999999999999999876544
No 280
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=80.01 E-value=1.5 Score=42.53 Aligned_cols=30 Identities=23% Similarity=0.259 Sum_probs=24.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
||+|||.| .|-+|..+++.+.+.| .++++.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~ 31 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVID 31 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEE
Confidence 36899999 5899999999999999 666654
No 281
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=79.99 E-value=3.9 Score=39.01 Aligned_cols=34 Identities=29% Similarity=0.387 Sum_probs=29.3
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .|.++..+++.+.+.|++|+++..+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCART 65 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 357899999 5789999999999999999988654
No 282
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=79.99 E-value=2.1 Score=42.56 Aligned_cols=147 Identities=15% Similarity=0.059 Sum_probs=81.9
Q ss_pred CCcEEEEEcCcHHHHHHHHHHH-H-cCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAH-E-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~-~-~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
|+.||.|+|.|.++...++.++ + -|++++++. +.+.. ....+++++ + .....|.+.++++ ....+|+|
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~-d~~~~-~~~~~~~~~---g--~~~~~~~~~~~ll---~~~~~D~V 70 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVT-DVNQE-AAQKVVEQY---Q--LNATVYPNDDSLL---ADENVDAV 70 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEE-CSSHH-HHHHHHHHT---T--CCCEEESSHHHHH---HCTTCCEE
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEE-cCCHH-HHHHHHHHh---C--CCCeeeCCHHHHh---cCCCCCEE
Confidence 4569999999999999999998 5 478888765 32211 111222211 0 0011255655554 34569999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCC--CCCcCccCCCHHHHHHHHH--HhCCc
Q 009323 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT--VPGSDGLLQSTEEAVKLAD--ELGFP 223 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipv--p~~~~~~~~s~~~~~~~~~--~ig~P 223 (537)
+-..- .......+..+.+.|.+++.-.|-+. ...+=..+.+++++.|+.. ..+..+.......+++..+ .+|-+
T Consensus 71 ~i~tp-~~~h~~~~~~al~~Gk~vl~EKP~a~-~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 148 (344)
T 3mz0_A 71 LVTSW-GPAHESSVLKAIKAQKYVFCEKPLAT-TAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEP 148 (344)
T ss_dssp EECSC-GGGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHTTTTSSE
T ss_pred EECCC-chhHHHHHHHHHHCCCcEEEcCCCCC-CHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHcCCCCCc
Confidence 86542 12335666677788887653222111 1112234555677888866 2222233334556666665 37777
Q ss_pred EEEEe
Q 009323 224 VMIKA 228 (537)
Q Consensus 224 vvvKp 228 (537)
..+..
T Consensus 149 ~~v~~ 153 (344)
T 3mz0_A 149 LMIHC 153 (344)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 283
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=79.99 E-value=1.2 Score=44.45 Aligned_cols=146 Identities=11% Similarity=0.026 Sum_probs=83.8
Q ss_pred CcEEEEEcCcHHHH-HHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~-~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+|.|.++. ..++++++. |+++++++. .+.. ....+++++ -+ ..|.+.++++ ....+|+|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~a~~~-g~------~~~~~~~~ll---~~~~~D~V~ 94 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIAS-RRWD-RAKRFTERF-GG------EPVEGYPALL---ERDDVDAVY 94 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEE-SSHH-HHHHHHHHH-CS------EEEESHHHHH---TCTTCSEEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEc-CCHH-HHHHHHHHc-CC------CCcCCHHHHh---cCCCCCEEE
Confidence 46899999999998 689999988 788887753 2211 112222221 01 1134545544 345799999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC-ccCCCHHHHHHHHH--HhCCcEE
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--ELGFPVM 225 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~-~~~~s~~~~~~~~~--~ig~Pvv 225 (537)
-..- .......+..+.+.|..++.-.|-+. ...+=..+.+++++.|+..-..+. +.......+++.++ .+|-+..
T Consensus 95 i~tp-~~~h~~~~~~al~aGk~Vl~EKP~a~-~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~ 172 (350)
T 3rc1_A 95 VPLP-AVLHAEWIDRALRAGKHVLAEKPLTT-DRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRS 172 (350)
T ss_dssp ECCC-GGGHHHHHHHHHHTTCEEEEESSSCS-SHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTTCSEEE
T ss_pred ECCC-cHHHHHHHHHHHHCCCcEEEeCCCCC-CHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCCCCeEE
Confidence 6542 11335666777788887653111111 111222345567888887644322 23344566777776 6787777
Q ss_pred EEecC
Q 009323 226 IKATA 230 (537)
Q Consensus 226 vKp~~ 230 (537)
+....
T Consensus 173 v~~~~ 177 (350)
T 3rc1_A 173 FAASF 177 (350)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66543
No 284
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=79.94 E-value=3.8 Score=38.76 Aligned_cols=75 Identities=17% Similarity=0.101 Sum_probs=46.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+.+..... ..+.. ..+.. +..+.+.+.+++++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHL-------DVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 57899999 57899999999999999999886543211100 11111 22332 244555555444322
Q ss_pred -CCCEEEeCCC
Q 009323 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 80 g~iD~lv~~Ag 90 (260)
T 1nff_A 80 GGLHVLVNNAG 90 (260)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6999886644
No 285
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=79.93 E-value=8.2 Score=36.61 Aligned_cols=75 Identities=9% Similarity=-0.007 Sum_probs=47.0
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hcc--CEEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLA--DESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~a--d~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+...... .+. -..+.. +..+.+.+.+++++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV-------DLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEEC-------CCCCHHHHHHHHHHHHHHc
Confidence 57899999 578999999999999999999875543221111 111 122332 244555555444432
Q ss_pred -CCCEEEeCCC
Q 009323 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 84 g~id~lv~nAg 94 (271)
T 3tzq_B 84 GRLDIVDNNAA 94 (271)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6998886544
No 286
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=79.81 E-value=4 Score=38.10 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=46.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhcc-C--EEEEcCCCCCCCCCCCHHHHHHHHHH----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLA-D--ESVCIGEAPSSQSYLLIPNVLSAAIS---- 141 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~a-d--~~~~i~~~~~~~~~~~~~~i~~~a~~---- 141 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+.+..... ..+. + ..+.. +..+.+.+.+++++
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVA-------DVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEE-------ecCCHHHHHHHHHHHHhh
Confidence 47899999 58899999999999999999986543211100 0111 1 22333 24455555555443
Q ss_pred cCCCEEEeCCC
Q 009323 142 RGCTMLHPGYG 152 (537)
Q Consensus 142 ~~~d~V~p~~g 152 (537)
.++|.|+-.-|
T Consensus 84 ~~id~li~~Ag 94 (254)
T 2wsb_A 84 APVSILVNSAG 94 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCc
Confidence 47898886644
No 287
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=79.78 E-value=2.4 Score=44.49 Aligned_cols=88 Identities=13% Similarity=0.150 Sum_probs=58.4
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh----hccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV----KLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~----~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
.||+.|.+.+.....+++.++++|.+++.+.+......... .+.+..+.+ +..|...+.+.+++.++|.
T Consensus 332 GKrv~i~~~~~~~~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~l~~~~~i~-------~d~d~~el~~~i~~~~pDL 404 (483)
T 3pdi_A 332 GKRVLLYTGGVKSWSVVSALQDLGMKVVATGTKKSTEEDKARIRELMGDDVKML-------DEGNARVLLKTVDEYQADI 404 (483)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHHSCSSCCBC-------CSCSHHHHHHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHhcCCCCEEE-------eCCCHHHHHHHHHhcCCCE
Confidence 58999999888889999999999999998754322111000 112222222 1246888999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcee
Q 009323 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 147 V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
++.+. . -...++++|+|++
T Consensus 405 ~ig~~-----~--~~~~a~k~gIP~~ 423 (483)
T 3pdi_A 405 LIAGG-----R--NMYTALKGRVPFL 423 (483)
T ss_dssp EECCG-----G--GHHHHHHTTCCBC
T ss_pred EEECC-----c--hhHHHHHcCCCEE
Confidence 99542 1 1244667888875
No 288
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=79.71 E-value=12 Score=36.15 Aligned_cols=109 Identities=15% Similarity=0.045 Sum_probs=59.7
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
..||+|+|. |.++..+++.+++.|++++..- ++.... ....... -|.+++++.+ +..+|+++-
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V-~p~~~g--~~~~G~~----------vy~sl~el~~---~~~~D~viI 70 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV-TPGKGG--TTHLGLP----------VFNTVREAVA---ATGATASVI 70 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTT--CEETTEE----------EESSHHHHHH---HHCCCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-CCCccc--ceeCCee----------ccCCHHHHhh---cCCCCEEEE
Confidence 368999997 9999999999999999855322 332110 0111111 1555555433 346887774
Q ss_pred CCCcccccHHHHHHHHHCCCce--eCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 150 GYGFLAENAVFVEMCREHGINF--IGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~--~Gp~~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
..-. .........+.+.|++. +.+.--. ..+...+.+.+++.|+.+
T Consensus 71 ~tP~-~~~~~~~~ea~~~Gi~~iVi~t~G~~---~~~~~~l~~~A~~~gv~l 118 (288)
T 2nu8_A 71 YVPA-PFCKDSILEAIDAGIKLIITITEGIP---TLDMLTVKVKLDEAGVRM 118 (288)
T ss_dssp CCCG-GGHHHHHHHHHHTTCSEEEECCCCCC---HHHHHHHHHHHHHHTCEE
T ss_pred ecCH-HHHHHHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHHHcCCEE
Confidence 3211 12245566666777763 1222000 012345666777777743
No 289
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=79.61 E-value=4 Score=39.62 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=29.7
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~ 65 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQ 65 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 357899999 57799999999999999999886543
No 290
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=79.60 E-value=1.5 Score=42.81 Aligned_cols=117 Identities=12% Similarity=0.141 Sum_probs=67.6
Q ss_pred CCcEEEEEcCcHHHHH-HHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~-ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
++.||.|+|.|.++.. .++.+++. |+++++++ +.+.. ....+++++ + . ..|.+.+++++ .+|+|
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~a~~~---~--~--~~~~~~~~ll~-----~~D~V 70 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAF-TPNKV-KREKICSDY---R--I--MPFDSIESLAK-----KCDCI 70 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEE-CSCHH-HHHHHHHHH---T--C--CBCSCHHHHHT-----TCSEE
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEE-CCCHH-HHHHHHHHc---C--C--CCcCCHHHHHh-----cCCEE
Confidence 3569999999999986 88888874 77888665 22211 112222221 1 0 12677777765 69999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCC
Q 009323 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPG 202 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~ 202 (537)
+-.... ......+..+.+.|.+++.-.|-+. ...+=..+.+.+++.|+..--.
T Consensus 71 ~i~tp~-~~h~~~~~~al~~gk~vl~EKP~~~-~~~~~~~l~~~a~~~g~~~~v~ 123 (308)
T 3uuw_A 71 FLHSST-ETHYEIIKILLNLGVHVYVDKPLAS-TVSQGEELIELSTKKNLNLMVG 123 (308)
T ss_dssp EECCCG-GGHHHHHHHHHHTTCEEEECSSSSS-SHHHHHHHHHHHHHHTCCEEEC
T ss_pred EEeCCc-HhHHHHHHHHHHCCCcEEEcCCCCC-CHHHHHHHHHHHHHcCCEEEEe
Confidence 865421 1335666667778887664212111 1112223445667788776444
No 291
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=79.57 E-value=3.8 Score=37.99 Aligned_cols=75 Identities=20% Similarity=0.108 Sum_probs=48.7
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-cc-CEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCE
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-LA-DESVCIGEAPSSQSYLLIPNVLSAAISR-GCTM 146 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-~a-d~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~d~ 146 (537)
.|++||.|+ |.++..+++.+.+.|++|++++.+.+....... .. -+.+.. +..+.+.+.+++++. ++|.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCV-------DLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHTTCCCCSE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEe-------cCCCHHHHHHHHHHcCCCCE
Confidence 478999994 889999999999999999988644321110000 11 123332 355677777777654 4898
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-.-|
T Consensus 80 vi~~Ag 85 (244)
T 1cyd_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886544
No 292
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=79.53 E-value=1.4 Score=44.08 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=49.1
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+ |.+|++++.+.+......++ +|+.+... +. ..+.+.++....++|.|
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~--~~~~v~~~~~g~g~Dvv 258 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-----RD--PVKQVMELTRGRGVNVA 258 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT-----SC--HHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEecc-----ch--HHHHHHHHhCCCCCcEE
Confidence 457999999999999999999999 99988886443322222233 56655321 11 22344444333479999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-..|
T Consensus 259 id~~G 263 (359)
T 1h2b_A 259 MDFVG 263 (359)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 97655
No 293
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=79.43 E-value=2.4 Score=37.34 Aligned_cols=32 Identities=9% Similarity=0.138 Sum_probs=29.4
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.+|+|+|+|..+..++..+.+.|.+|+++...
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 47999999999999999999999999999644
No 294
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=79.32 E-value=1.6 Score=39.31 Aligned_cols=76 Identities=13% Similarity=0.169 Sum_probs=45.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
.++|||.| .|.++..+++.++..|.+|++++.+.+.......+ ++..+... +....+.+.+.....++|.++
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~------~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSR------SVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETT------CSTHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCC------cHHHHHHHHHHhCCCCCeEEE
Confidence 57899999 69999999999999999988886443221111111 23333221 111233444443334689888
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-..|
T Consensus 113 ~~~g 116 (198)
T 1pqw_A 113 NSLA 116 (198)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 6554
No 295
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=79.31 E-value=2.2 Score=42.32 Aligned_cols=77 Identities=23% Similarity=0.216 Sum_probs=49.9
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|. |.++..+++.|+.+|.+|+++..+.+......++ +|..+.. .....+.+.++....++|.|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~-------~~~~~~~v~~~~~~~g~Dvv 231 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPL-------EEGWAKAVREATGGAGVDMV 231 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEES-------STTHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecC-------chhHHHHHHHHhCCCCceEE
Confidence 4679999997 9999999999999999999887544433322333 4544431 11123344444434479999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-..|.
T Consensus 232 id~~g~ 237 (342)
T 4eye_A 232 VDPIGG 237 (342)
T ss_dssp EESCC-
T ss_pred EECCch
Confidence 976653
No 296
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=79.24 E-value=6.6 Score=39.18 Aligned_cols=143 Identities=10% Similarity=-0.023 Sum_probs=76.7
Q ss_pred CcEEEEEcCcHHHHH-HHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~-ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+|.|.++.. .++.+++. +++++++. +.+......++.. ...|.+.+++++ ...+|+|+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~~~~~~~~~----------~~~~~~~~~ll~---~~~vD~V~ 70 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIV-ERSKELSKERYPQ----------ASIVRSFKELTE---DPEIDLIV 70 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEE-CSSCCGGGTTCTT----------SEEESCSHHHHT---CTTCCEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEE-cCCHHHHHHhCCC----------CceECCHHHHhc---CCCCCEEE
Confidence 358999999999987 77888776 78888776 3333221111111 122556556553 35699999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC-ccCCCHHHHHHHHHH--hCCcEE
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLADE--LGFPVM 225 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~-~~~~s~~~~~~~~~~--ig~Pvv 225 (537)
-..-. ......+..+.+.|+.++.-.|-+. ...+=..+.+.+++.|+..--.+. +.......+++.+++ +|-+..
T Consensus 71 i~tp~-~~H~~~~~~al~aGkhVl~EKP~a~-~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~ 148 (362)
T 3fhl_A 71 VNTPD-NTHYEYAGMALEAGKNVVVEKPFTS-TTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLLGRLVE 148 (362)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEEESSCCS-SHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTTTSSEEE
T ss_pred EeCCh-HHHHHHHHHHHHCCCeEEEecCCCC-CHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHcCCCCCeEE
Confidence 65421 2335667777778887653111110 011112344456666766533221 112233445555543 565655
Q ss_pred EEec
Q 009323 226 IKAT 229 (537)
Q Consensus 226 vKp~ 229 (537)
+...
T Consensus 149 v~~~ 152 (362)
T 3fhl_A 149 YEST 152 (362)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 297
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=79.23 E-value=4.4 Score=38.52 Aligned_cols=33 Identities=12% Similarity=-0.023 Sum_probs=29.0
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 57899999 5789999999999999999988644
No 298
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=79.13 E-value=1.1 Score=44.66 Aligned_cols=78 Identities=15% Similarity=0.162 Sum_probs=50.4
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.|.++..+++.|+.+|. +|++++++.+......++ +|..+... +....+.+.++....++|.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~------~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK------NGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGG------GSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCC------CcCHHHHHHHHcCCCCCCE
Confidence 346789999999999999999999999 788885443322222333 45444211 1122345555554557999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 239 v~d~~g 244 (352)
T 3fpc_A 239 VVIAGG 244 (352)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 996655
No 299
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=79.08 E-value=11 Score=35.85 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=30.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 41 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAV 41 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCS
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccch
Confidence 57899999 577999999999999999999876544
No 300
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=79.08 E-value=3.6 Score=40.51 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=32.8
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~ 106 (537)
|+||++.|..+.++..++++.+.|+++++|.+.+|.
T Consensus 4 mmrIvf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~ 39 (317)
T 3rfo_A 4 MIKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDR 39 (317)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred ceEEEEEeCCHHHHHHHHHHHHCCCcEEEEEeCCCc
Confidence 479999999999999999999999999999887765
No 301
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=79.06 E-value=3.3 Score=38.57 Aligned_cols=34 Identities=9% Similarity=0.057 Sum_probs=29.3
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999988654
No 302
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=79.04 E-value=2.3 Score=38.59 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=29.0
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
|||||.| .|.++..+++.+.+.|++|+++..+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4799999 58999999999999999999986543
No 303
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=79.02 E-value=5.9 Score=41.98 Aligned_cols=32 Identities=6% Similarity=0.047 Sum_probs=28.4
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.||+.|.+.+..+..+++.++++|.+++.+.+
T Consensus 335 GKrv~i~~~~~~~~~l~~~l~ElGm~vv~~~t 366 (533)
T 1mio_A 335 GKTACLYVGGSRSHTYMNMLKSFGVDSLVAGF 366 (533)
T ss_dssp TCEEEEEESSSHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHCCCEEEEEEe
Confidence 57999999888999999999999999998754
No 304
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=79.00 E-value=9 Score=39.55 Aligned_cols=94 Identities=15% Similarity=0.131 Sum_probs=58.7
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhc--cCEEEEcCCCCCCCCCCCHHHHHHHHHHcC-CCE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL--ADESVCIGEAPSSQSYLLIPNVLSAAISRG-CTM 146 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~--ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~-~d~ 146 (537)
.|||+|+|.|.++..+++.+++.|++|.+.+.......+. ..+ ..-.+.++..+ +.++ .+ +|.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~--------~~~~-----~~~~d~ 75 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP--------LELL-----DEDFCY 75 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCC--------GGGG-----GSCEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCCh--------HHhh-----cCCCCE
Confidence 5799999999999999999999999999986533211111 111 12233343111 0111 23 788
Q ss_pred EEeCCCcccccHHHHHHHHHCCCceeCCCHHHH
Q 009323 147 LHPGYGFLAENAVFVEMCREHGINFIGPNPDSI 179 (537)
Q Consensus 147 V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i 179 (537)
|+...|.-..++.+ ..+.+.|+++++ ..+..
T Consensus 76 vv~spgi~~~~p~~-~~a~~~gi~v~~-~~e~~ 106 (451)
T 3lk7_A 76 MIKNPGIPYNNPMV-KKALEKQIPVLT-EVELA 106 (451)
T ss_dssp EEECTTSCTTSHHH-HHHHHTTCCEEC-HHHHH
T ss_pred EEECCcCCCCChhH-HHHHHCCCcEEe-HHHHH
Confidence 88777765566665 445678999884 44443
No 305
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=78.74 E-value=4.1 Score=38.58 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=28.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 49 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA 49 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 57899999 5789999999999999999988643
No 306
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=78.73 E-value=1.5 Score=43.08 Aligned_cols=79 Identities=22% Similarity=0.209 Sum_probs=51.6
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.| .|.++..+++.|+.+|.+++++..+.+......++ +|..+... +....+.+.++....++|.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~------~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYS------HEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCC------CccHHHHHHHHhCCCCceE
Confidence 3467999999 79999999999999999998886443322222222 45555321 1122345555554457999
Q ss_pred EEeCCCc
Q 009323 147 LHPGYGF 153 (537)
Q Consensus 147 V~p~~g~ 153 (537)
|+-..|.
T Consensus 213 vid~~g~ 219 (325)
T 3jyn_A 213 VYDGVGQ 219 (325)
T ss_dssp EEESSCG
T ss_pred EEECCCh
Confidence 9977664
No 307
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=78.49 E-value=2.4 Score=42.31 Aligned_cols=73 Identities=15% Similarity=0.046 Sum_probs=49.3
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|.+|+++....+...... ++ +|..+. |.+.+.+.++. .++|.|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~---------~~~~~~~~~~~--~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVI---------GSDQAKMSELA--DSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEE---------TTCHHHHHHST--TTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeec---------cccHHHHHHhc--CCCCEE
Confidence 467999999999999999999999999888865444322222 22 455443 33444444332 378999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-..|.
T Consensus 249 id~~g~ 254 (357)
T 2cf5_A 249 IDTVPV 254 (357)
T ss_dssp EECCCS
T ss_pred EECCCC
Confidence 977663
No 308
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=78.34 E-value=5 Score=42.51 Aligned_cols=86 Identities=13% Similarity=0.104 Sum_probs=55.6
Q ss_pred CcEEEEEcCcHHHHHHHHHH-HHcCCCEEEEecCCCCCChh-----hhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCC
Q 009323 71 QEKILVANRGEIAVRVIRTA-HEMGIPCVAVYSTIDKDALH-----VKLADESVCIGEAPSSQSYLLIPNVLSAAISRGC 144 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa-~~~G~~vv~v~~~~d~~~~~-----~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~ 144 (537)
.||++|.+.+..+..+++.+ +++|.+++.+.+........ ..+.++.+. ..|...+.+.+++.++
T Consensus 280 GKrv~i~gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~~~~v~i---------~~D~~el~~~i~~~~p 350 (525)
T 3aek_B 280 GKRVFIFGDGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEYGLEALI---------TDDYLEVEKAIEAAAP 350 (525)
T ss_dssp TCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHTTCCCEE---------CSCHHHHHHHHHHHCC
T ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHHHhcCCcEEE---------eCCHHHHHHHHhhcCC
Confidence 58999999888999999999 89999998875432211111 112232222 2356778888888889
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcee
Q 009323 145 TMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 145 d~V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
|.++.+ ..-...+++.|++++
T Consensus 351 DL~ig~-------~~~~~~a~~~giP~~ 371 (525)
T 3aek_B 351 ELILGT-------QMERNIAKKLGLPCA 371 (525)
T ss_dssp SEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CEEEec-------chhHHHHHHcCCCEE
Confidence 988842 122334556677653
No 309
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=78.28 E-value=1.4 Score=42.68 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=29.4
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 72 EKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
|||||.|+ |-++..+++.+.+.|++|++++....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 35 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSS 35 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 48999996 99999999999999999999864433
No 310
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=78.25 E-value=2.3 Score=43.27 Aligned_cols=35 Identities=6% Similarity=0.036 Sum_probs=29.6
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCC--EEEEecCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIP--CVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~--vv~v~~~~ 104 (537)
|+++|+|+|+|..+...+..+++.|++ ++++..++
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 457999999999999999999999998 88886544
No 311
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=78.16 E-value=8.3 Score=38.42 Aligned_cols=90 Identities=12% Similarity=0.037 Sum_probs=54.7
Q ss_pred cEEEEEcCcHHHHH-HHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 72 EKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~kvLi~g~g~~a~~-ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
.||.|+|.|.++.. .++++++. ++++++++ +.+.. ....+++++ .....|.+.+++++ ...+|+|+-
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~a~~~------~~~~~~~~~~~ll~---~~~vD~V~i 74 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAAC-DSDLE-RARRVHRFI------SDIPVLDNVPAMLN---QVPLDAVVM 74 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEE-CSSHH-HHGGGGGTS------CSCCEESSHHHHHH---HSCCSEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEE-cCCHH-HHHHHHHhc------CCCcccCCHHHHhc---CCCCCEEEE
Confidence 58999999999985 88999887 78888775 32221 112233321 01123566666654 467999996
Q ss_pred CCCcccccHHHHHHHHHCCCceeC
Q 009323 150 GYGFLAENAVFVEMCREHGINFIG 173 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~G 173 (537)
... .......+..+.+.|+.++.
T Consensus 75 ~tp-~~~H~~~~~~al~aGkhVl~ 97 (359)
T 3m2t_A 75 AGP-PQLHFEMGLLAMSKGVNVFV 97 (359)
T ss_dssp CSC-HHHHHHHHHHHHHTTCEEEE
T ss_pred cCC-cHHHHHHHHHHHHCCCeEEE
Confidence 532 11234556666677877653
No 312
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=78.13 E-value=3.3 Score=39.13 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=29.2
Q ss_pred CcEEEEEcC---cHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g~---g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.|+ +.++..+++.+.+.|++|++++.+.
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 478999996 5899999999999999999886543
No 313
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=78.11 E-value=2.7 Score=40.67 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=29.1
Q ss_pred CCCcEEEEEcC-cH--HHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVANR-GE--IAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g~-g~--~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
...|++||.|+ |. ++..+++.+.+.|++|++++.+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 34578999996 34 9999999999999999988644
No 314
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=78.03 E-value=2.3 Score=39.20 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=28.3
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
++||+|+|.|.++..+++.+.+.|+++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeC
Confidence 46899999999999999999999999888754
No 315
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=77.95 E-value=2.8 Score=42.19 Aligned_cols=73 Identities=22% Similarity=0.173 Sum_probs=48.1
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
..++|||.|.|.++..+++.|+.+|.+|+++...++......++ +|..+. |.+.+.+.++. .++|.|+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~---------~~~~~~~~~~~--~g~Dvvi 262 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVN---------SRNADEMAAHL--KSFDFIL 262 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEE---------TTCHHHHHTTT--TCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEec---------cccHHHHHHhh--cCCCEEE
Confidence 46799999999999999999999999988876444332222222 455543 33333332222 4799999
Q ss_pred eCCCc
Q 009323 149 PGYGF 153 (537)
Q Consensus 149 p~~g~ 153 (537)
-..|.
T Consensus 263 d~~g~ 267 (369)
T 1uuf_A 263 NTVAA 267 (369)
T ss_dssp ECCSS
T ss_pred ECCCC
Confidence 76653
No 316
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=77.90 E-value=3.5 Score=38.63 Aligned_cols=69 Identities=13% Similarity=0.048 Sum_probs=46.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc--CCCEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR--GCTML 147 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~--~~d~V 147 (537)
||++||.| .|.++..+++.+.+.|++|++++.+.+... .+ +. -+..+.+.+.+++++. ++|.+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~--~~-------~Dl~~~~~v~~~~~~~~~~id~l 66 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----AD--LS-------TAEGRKQAIADVLAKCSKGMDGL 66 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CC--TT-------SHHHHHHHHHHHHTTCTTCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----cc--cc-------cCCCCHHHHHHHHHHhCCCCCEE
Confidence 47899999 578999999999999999998865433211 00 11 1234455666666554 67998
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-.-|.
T Consensus 67 v~~Ag~ 72 (257)
T 1fjh_A 67 VLCAGL 72 (257)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 866554
No 317
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=77.79 E-value=3.2 Score=40.71 Aligned_cols=35 Identities=9% Similarity=0.128 Sum_probs=29.7
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
..|++||.| .|.++..+++.+.+.|++|+++..+.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~ 42 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ 42 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCH
Confidence 357899999 57899999999999999999886543
No 318
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=77.78 E-value=1.5 Score=43.32 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=51.6
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.| .|.++..+++.|+.+|.+++++..+.+......++ +|..+... +....+.+.++....++|.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~------~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINAS------KEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETT------TSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCC------CchHHHHHHHHhCCCCceE
Confidence 3467999999 79999999999999999999886543322222222 45544321 1122345555544557999
Q ss_pred EEeCCCc
Q 009323 147 LHPGYGF 153 (537)
Q Consensus 147 V~p~~g~ 153 (537)
|+-..|.
T Consensus 221 vid~~g~ 227 (334)
T 3qwb_A 221 SFDSVGK 227 (334)
T ss_dssp EEECCGG
T ss_pred EEECCCh
Confidence 9976653
No 319
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=77.72 E-value=2.6 Score=40.11 Aligned_cols=35 Identities=29% Similarity=0.298 Sum_probs=29.6
Q ss_pred CCcEEEEEcC---cHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVANR---GEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g~---g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
..|++||.|+ +.++..+++.+.+.|++|++++.+.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 3578999994 7899999999999999999886443
No 320
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=77.70 E-value=13 Score=36.76 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=31.3
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~ 106 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+.+.
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~ 81 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 357899999 5789999999999999999998765543
No 321
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=77.67 E-value=2.3 Score=41.55 Aligned_cols=34 Identities=9% Similarity=0.055 Sum_probs=29.8
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.+.|+|+|+|..+..++..+++.|++|+++...
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECC
Confidence 3467999999999999999999999999999543
No 322
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=77.67 E-value=2.4 Score=41.87 Aligned_cols=90 Identities=13% Similarity=0.119 Sum_probs=53.6
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
+.||.|+|.|.++...++++++. +.++++++. .+... ...+++++- + ...|.+.+++++ ...+|+|+-
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d-~~~~~-~~~~a~~~~-~-----~~~~~~~~~ll~---~~~~D~V~i 73 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSS-RTLES-AQAFANKYH-L-----PKAYDKLEDMLA---DESIDVIYV 73 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEEC-SCSST-TCC---CCC-C-----SCEESCHHHHHT---CTTCCEEEE
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEc-CCHHH-HHHHHHHcC-C-----CcccCCHHHHhc---CCCCCEEEE
Confidence 45899999999999999999887 556776652 22211 122232210 1 123566666653 357999986
Q ss_pred CCCcccccHHHHHHHHHCCCcee
Q 009323 150 GYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
..-. ......+..+.+.|..++
T Consensus 74 ~tp~-~~h~~~~~~al~aGk~Vl 95 (329)
T 3evn_A 74 ATIN-QDHYKVAKAALLAGKHVL 95 (329)
T ss_dssp CSCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCCc-HHHHHHHHHHHHCCCeEE
Confidence 5321 133566666777887765
No 323
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=77.64 E-value=4.4 Score=37.91 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=29.0
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 57899999 5789999999999999999998654
No 324
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.57 E-value=2.2 Score=39.44 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCCCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 68 ~~~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
..+.|+|||.|+ |.++..+++.+.+.|++|+++..+.+
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 344679999995 89999999999999999999975443
No 325
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=77.48 E-value=5.4 Score=37.48 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=29.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 42 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGE 42 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999 577999999999999999999875443
No 326
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=77.48 E-value=3.7 Score=40.46 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=32.0
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~ 106 (537)
.+||+++|..+.++..++++.+.|+++++|.+.+|.
T Consensus 7 ~mrivf~Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~ 42 (318)
T 3q0i_A 7 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPER 42 (318)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTSSSEEEEEECCCC-
T ss_pred CCEEEEEecCHHHHHHHHHHHHCCCcEEEEEcCCCC
Confidence 469999999999999999999999999999887664
No 327
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=77.46 E-value=1.4 Score=43.68 Aligned_cols=37 Identities=24% Similarity=0.273 Sum_probs=31.3
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~ 106 (537)
|.+||+++|....+..+++++.+.|+++++|.+.+|.
T Consensus 21 ~~mrIvf~G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 57 (329)
T 2bw0_A 21 QSMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDK 57 (329)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEEeCCCc
Confidence 3469999999889999999999999999988876553
No 328
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=77.42 E-value=5.8 Score=37.04 Aligned_cols=75 Identities=11% Similarity=-0.024 Sum_probs=46.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhh-hccCEEEEcCCCCCCCCCCCHHHHHHHHHH-----cC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHV-KLADESVCIGEAPSSQSYLLIPNVLSAAIS-----RG 143 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~-~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~-----~~ 143 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+...... .+.-..+..+ ..+.+.+.+++++ .+
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D-------~~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMD-------VADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECC-------TTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEec-------CCCHHHHHHHHHHHHHHcCC
Confidence 47899999 578999999999999999999864432111000 0112233332 3455555444433 25
Q ss_pred CCEEEeCCC
Q 009323 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~p~~g 152 (537)
+|.++-.-|
T Consensus 78 id~lvn~Ag 86 (245)
T 1uls_A 78 LDGVVHYAG 86 (245)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898886655
No 329
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=77.42 E-value=3.8 Score=40.34 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=28.1
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGI-PCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~ 103 (537)
.|++||+|.|..+..++.++.++|. +++++..+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 5799999999999999999999999 56666433
No 330
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=77.38 E-value=4.3 Score=39.05 Aligned_cols=92 Identities=15% Similarity=0.136 Sum_probs=50.4
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+| .|.++..+++.+.+. +++++.+..............+ . .+-.+...-+.+.+++++ ++|+|+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~ge-l--~g~~~gv~v~~dl~~ll~-----~~DVVI 78 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGA-F--LGKQTGVALTDDIERVCA-----EADYLI 78 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTT-T--TTCCCSCBCBCCHHHHHH-----HCSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHH-H--hCCCCCceecCCHHHHhc-----CCCEEE
Confidence 56999999 899999999998775 7777776432211111110000 0 000011122566666654 388887
Q ss_pred eCCCcccc-cHHHHHHHHHCCCcee
Q 009323 149 PGYGFLAE-NAVFVEMCREHGINFI 172 (537)
Q Consensus 149 p~~g~~se-~~~~a~~~e~~gi~~~ 172 (537)
-... .+ .......+.+.|++++
T Consensus 79 DfT~--p~a~~~~~~~al~~G~~vV 101 (272)
T 4f3y_A 79 DFTL--PEGTLVHLDAALRHDVKLV 101 (272)
T ss_dssp ECSC--HHHHHHHHHHHHHHTCEEE
T ss_pred EcCC--HHHHHHHHHHHHHcCCCEE
Confidence 4221 11 1345566777888753
No 331
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.33 E-value=4.9 Score=39.94 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=27.4
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
.+||||+|.|..|..+++.+.+.|+..+.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~Itlv 64 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFV 64 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEe
Confidence 4689999999999999999999999876543
No 332
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=77.13 E-value=7 Score=40.36 Aligned_cols=112 Identities=13% Similarity=0.022 Sum_probs=67.7
Q ss_pred cEEEEEcCcHHHHHHHHHHHH----------cCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009323 72 EKILVANRGEIAVRVIRTAHE----------MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~----------~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~ 141 (537)
-||.|+|-|.++..+++.+++ .+++++.+. +.+... ...+++. ..-|.|.++++ ..
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~-d~~~~~-~~~~~~~---------~~~~~d~~ell---~d 76 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAA-VRNLDK-AEALAGG---------LPLTTNPFDVV---DD 76 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEE-CSCHHH-HHHHHTT---------CCEESCTHHHH---TC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEE-ECCHHH-hhhhccc---------CcccCCHHHHh---cC
Confidence 389999999999888877653 356667665 222111 1111111 11244555554 34
Q ss_pred cCCCEEEeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 142 RGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 142 ~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
..+|+|+-..+.......+...+.+.|..++..++.. ...+=..+.+++++.|+..
T Consensus 77 ~diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal--~a~~~~eL~~~A~~~gv~l 132 (444)
T 3mtj_A 77 PEIDIVVELIGGLEPARELVMQAIANGKHVVTANKHL--VAKYGNEIFAAAQAKGVMV 132 (444)
T ss_dssp TTCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHH--HHHHHHHHHHHHHHHTCCE
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCccc--CHHHHHHHHHHHHHhCCeE
Confidence 5799998654321123456667778999988777732 2334456677888888876
No 333
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=77.10 E-value=4.3 Score=38.61 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=31.0
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.....|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3334467899999 5779999999999999999988654
No 334
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=77.04 E-value=5.1 Score=40.21 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=49.9
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCC-HHHHHHHHHHcCCCE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLL-IPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~-~~~i~~~a~~~~~d~ 146 (537)
..++|||.|.|.++..+++.|+.+|. +|++++.+++......++ +|+.+... +...+ .+.+.++... ++|.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-----~~~~~~~~~i~~~~~g-g~D~ 266 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPK-----DHDKPIQEVIVDLTDG-GVDY 266 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGG-----GCSSCHHHHHHHHTTS-CBSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccc-----cCchhHHHHHHHhcCC-CCCE
Confidence 46789999999999999999999999 788885444433333333 45544211 10123 3344444433 8999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 267 vid~~g 272 (378)
T 3uko_A 267 SFECIG 272 (378)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 997665
No 335
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=77.03 E-value=5.6 Score=37.36 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999988654
No 336
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=77.00 E-value=6.4 Score=36.87 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5779999999999999999988654
No 337
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=76.91 E-value=5.3 Score=39.27 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=31.6
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~ 106 (537)
+||+++|.++.+...++++.+.|+++++|.+.+|.
T Consensus 4 mrIvf~Gt~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 38 (314)
T 1fmt_A 4 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDR 38 (314)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCCCB
T ss_pred CEEEEEecCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 68999999999999999999999999988887664
No 338
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=76.84 E-value=1.1 Score=44.67 Aligned_cols=147 Identities=10% Similarity=-0.005 Sum_probs=79.5
Q ss_pred CCcEEEEEcCcHHHH-HHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAV-RVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~-~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
|+.||.|+|.|.++. ..++.+++. +++++++.+ .+ ....+++++- + +....|.+.+++++ ...+|+|
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~---~~~~~a~~~~-~---~~~~~~~~~~~ll~---~~~~D~V 69 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFD-LH---VNEKAAAPFK-E---KGVNFTADLNELLT---DPEIELI 69 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEEC-TT---CCHHHHHHHH-T---TTCEEESCTHHHHS---CTTCCEE
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEEC-CC---HHHHHHHhhC-C---CCCeEECCHHHHhc---CCCCCEE
Confidence 456999999999998 577777775 788887763 33 1223322210 0 01112556566553 3569999
Q ss_pred EeCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC-ccCCCHHHHHHHHH--HhCCcE
Q 009323 148 HPGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--ELGFPV 224 (537)
Q Consensus 148 ~p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~-~~~~s~~~~~~~~~--~ig~Pv 224 (537)
+-.... ......+..+.+.|+.++.-.|-+. ...+=..+.+++++.|+..--.+. +.......+++.++ .+|-+.
T Consensus 70 ~i~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~-~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~ 147 (349)
T 3i23_A 70 TICTPA-HTHYDLAKQAILAGKSVIVEKPFCD-TLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEIN 147 (349)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEE
T ss_pred EEeCCc-HHHHHHHHHHHHcCCEEEEECCCcC-CHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCEE
Confidence 865422 2335666677778887764222111 111222344566777776543321 11222345555554 456666
Q ss_pred EEEec
Q 009323 225 MIKAT 229 (537)
Q Consensus 225 vvKp~ 229 (537)
.+...
T Consensus 148 ~~~~~ 152 (349)
T 3i23_A 148 EVETH 152 (349)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66554
No 339
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=76.83 E-value=5.9 Score=37.16 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=29.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 38 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD 38 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999 47899999999999999999885443
No 340
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=76.82 E-value=2 Score=42.38 Aligned_cols=143 Identities=12% Similarity=0.045 Sum_probs=76.2
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|+.||.|+|.|.++...++.+++. +++++.++ +.+.. ....+++++ + .. |.+.++++ ....+|+|+
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~~~~~---~----~~-~~~~~~~l---~~~~~D~V~ 68 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVA-DAFPA-AAEAIAGAY---G----CE-VRTIDAIE---AAADIDAVV 68 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEE-CSSHH-HHHHHHHHT---T----CE-ECCHHHHH---HCTTCCEEE
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEE-CCCHH-HHHHHHHHh---C----CC-cCCHHHHh---cCCCCCEEE
Confidence 457999999999999999999986 78888765 32221 112222221 1 01 55555554 345799998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC-ccCCCHHHHHHHHHH--hCCcEE
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLADE--LGFPVM 225 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~-~~~~s~~~~~~~~~~--ig~Pvv 225 (537)
-.... ......+..+.+.|..++.-.|-+. ...+-..+.+.+++.|+..--.+. +.......+++..++ +|-+..
T Consensus 69 i~tp~-~~h~~~~~~al~~gk~v~~EKP~~~-~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 146 (331)
T 4hkt_A 69 ICTPT-DTHADLIERFARAGKAIFCEKPIDL-DAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGEVEM 146 (331)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECSCSCS-SHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTCSEEE
T ss_pred EeCCc-hhHHHHHHHHHHcCCcEEEecCCCC-CHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCCceEE
Confidence 65421 1235566666677876653221111 111122344456677766533321 112223445555543 566655
Q ss_pred EE
Q 009323 226 IK 227 (537)
Q Consensus 226 vK 227 (537)
+.
T Consensus 147 ~~ 148 (331)
T 4hkt_A 147 VT 148 (331)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 341
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=76.78 E-value=1.6 Score=42.79 Aligned_cols=111 Identities=8% Similarity=-0.002 Sum_probs=58.5
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
++.||.|+|.|.++..+++++++. ++++++++ +.++... .. .+. + ..++.+ +.+. .++|+|+
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~-d~~~~~~-----~~---~g~-~-~~~~~~---l~~~---~~~DvVi 70 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIV-RRNPAEV-----PF---ELQ-P-FRVVSD---IEQL---ESVDVAL 70 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEE-CC---------------CCT-T-SCEESS---GGGS---SSCCEEE
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEE-cCCHHHH-----HH---cCC-C-cCCHHH---HHhC---CCCCEEE
Confidence 346899999999999999999884 67877654 3332211 11 110 1 112333 2222 4699999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCC
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVP 198 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gip 198 (537)
-.... ......+..+.+.|++++.-.+-......+-..+.+.+++.|+.
T Consensus 71 iatp~-~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~ 119 (304)
T 3bio_A 71 VCSPS-REVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAA 119 (304)
T ss_dssp ECSCH-HHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCE
T ss_pred ECCCc-hhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCE
Confidence 65421 12345555666778877643221111222333444455566643
No 342
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=76.77 E-value=3.2 Score=42.32 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=30.0
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
..||+|+|.|.++..+++.|+.+|.+|++++.++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4699999999999999999999999988885444
No 343
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=76.76 E-value=17 Score=35.33 Aligned_cols=105 Identities=16% Similarity=0.088 Sum_probs=56.8
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCCEE-EEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcC-CCEEE
Q 009323 72 EKILVANR-GEIAVRVIRTAHEMGIPCV-AVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRG-CTMLH 148 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~G~~vv-~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~-~d~V~ 148 (537)
.+++|+|. |..+..+++.+++.|++++ .+ ++... ........ -|.+++++. .+.+ +|+++
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~V--nP~~~--g~~i~G~~----------vy~sl~el~---~~~~~~DvaI 76 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGV--TPGKG--GSEVHGVP----------VYDSVKEAL---AEHPEINTSI 76 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEE--CTTCT--TCEETTEE----------EESSHHHHH---HHCTTCCEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEEEe--CCCCC--CceECCEe----------eeCCHHHHh---hcCCCCCEEE
Confidence 47888895 7889999999999999843 34 33321 01111111 145555443 2334 77766
Q ss_pred eCCCcccccHHHHHHHHHCCCc-ee-CCC--HHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 149 PGYGFLAENAVFVEMCREHGIN-FI-GPN--PDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~-~~-Gp~--~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
-..-. .......+.+.+.|++ ++ ..+ ++ .+....++.+++.|+.+
T Consensus 77 i~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~-----~~~~~l~~~A~~~gi~v 125 (297)
T 2yv2_A 77 VFVPA-PFAPDAVYEAVDAGIRLVVVITEGIPV-----HDTMRFVNYARQKGATI 125 (297)
T ss_dssp ECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCH-----HHHHHHHHHHHHHTCEE
T ss_pred EecCH-HHHHHHHHHHHHCCCCEEEEECCCCCH-----HHHHHHHHHHHHcCCEE
Confidence 43211 1124555666677776 22 221 11 12455666777777743
No 344
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=76.72 E-value=5.4 Score=37.47 Aligned_cols=76 Identities=13% Similarity=0.059 Sum_probs=46.6
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+..... ..+.. ..+.+ +..+.+.+.+++++.
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAA-------DISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-------CTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEe-------cCCCHHHHHHHHHHHHHhc
Confidence 47899999 57799999999999999999986543211110 11111 22222 234445554444432
Q ss_pred -CCCEEEeCCCc
Q 009323 143 -GCTMLHPGYGF 153 (537)
Q Consensus 143 -~~d~V~p~~g~ 153 (537)
++|.++-.-|.
T Consensus 82 g~id~li~~Ag~ 93 (261)
T 3n74_A 82 GKVDILVNNAGI 93 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 78998876553
No 345
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=76.70 E-value=2.8 Score=41.58 Aligned_cols=77 Identities=19% Similarity=0.120 Sum_probs=52.6
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|.|.++..+++.|+.+ |.+|++++.+.+......++ +|..+... ....+.+.++....++|.
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~-------~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG-------AGAADAIRELTGGQGATA 242 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECS-------TTHHHHHHHHHGGGCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCC-------CcHHHHHHHHhCCCCCeE
Confidence 3467999999999999999999999 78888886544333333333 56555321 123456666665568999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 243 v~d~~G 248 (345)
T 3jv7_A 243 VFDFVG 248 (345)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 997665
No 346
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=76.69 E-value=2.5 Score=40.44 Aligned_cols=74 Identities=11% Similarity=0.005 Sum_probs=47.3
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhcc---C-EEEEcCCCCCCCCCCCHHHHHHHHHHc---
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLA---D-ESVCIGEAPSSQSYLLIPNVLSAAISR--- 142 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~a---d-~~~~i~~~~~~~~~~~~~~i~~~a~~~--- 142 (537)
|++||.| .+.++..+++.+.+.|++|++++.+.+..... ..+. . ..+.. +..+.+.+.+++++.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTL-------DVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEEC-------CTTCHHHHHHHHHTCCGG
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEc-------CCCCHHHHHHHHHHHHHH
Confidence 7899999 46789999999999999999986543211100 0111 1 12222 355667777766553
Q ss_pred --CCCEEEeCCC
Q 009323 143 --GCTMLHPGYG 152 (537)
Q Consensus 143 --~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 95 ~g~iD~lvnnAG 106 (272)
T 2nwq_A 95 FATLRGLINNAG 106 (272)
T ss_dssp GSSCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 5798886654
No 347
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=76.67 E-value=3.6 Score=38.61 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=29.1
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 39 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN 39 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999988543
No 348
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=76.57 E-value=7.8 Score=37.72 Aligned_cols=33 Identities=9% Similarity=0.018 Sum_probs=28.6
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHc-CCCEEEEecCC
Q 009323 72 EKILVANR-GEIAVRVIRTAHEM-GIPCVAVYSTI 104 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~-G~~vv~v~~~~ 104 (537)
|+|||.|+ |-+|..+++.+.+. |++|+++....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 35 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS 35 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 48999995 99999999999998 89999986543
No 349
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=76.50 E-value=2.7 Score=42.28 Aligned_cols=33 Identities=12% Similarity=0.256 Sum_probs=29.7
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.++|+|+|.|.++..+++.++.+|.+|++++.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 479999999999999999999999998888544
No 350
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=76.49 E-value=3.4 Score=38.90 Aligned_cols=32 Identities=9% Similarity=0.160 Sum_probs=27.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999 578999999999999999999865
No 351
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=76.49 E-value=4 Score=40.49 Aligned_cols=75 Identities=9% Similarity=0.050 Sum_probs=50.0
Q ss_pred cEEEEE-cCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 72 EKILVA-NRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~kvLi~-g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
++|||. |.|.++..+++.|+.+|.+|++++.+.+......++ +|..+... +....+.+.++....++|.|+-
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~------~~~~~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEK------APDFEATLREVMKAEQPRIFLD 239 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETT------STTHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECC------cHHHHHHHHHHhcCCCCcEEEE
Confidence 577776 689999999999999999999886544332222223 55555421 1223455666665578999997
Q ss_pred CCC
Q 009323 150 GYG 152 (537)
Q Consensus 150 ~~g 152 (537)
..|
T Consensus 240 ~~g 242 (349)
T 3pi7_A 240 AVT 242 (349)
T ss_dssp SSC
T ss_pred CCC
Confidence 665
No 352
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=76.39 E-value=5 Score=37.51 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5889999999999999999998644
No 353
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=76.30 E-value=6 Score=41.09 Aligned_cols=87 Identities=14% Similarity=0.073 Sum_probs=54.7
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-------c--cCEEEEcCCCCCCCCCCCHHHHHHHHHH
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-------L--ADESVCIGEAPSSQSYLLIPNVLSAAIS 141 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-------~--ad~~~~i~~~~~~~~~~~~~~i~~~a~~ 141 (537)
.||++|.+.+..+..+++.++++|.+++.+.+.......... . .+-.+.. -.|...+.+++++
T Consensus 312 gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~--------~~d~~~l~~~i~~ 383 (458)
T 1mio_B 312 GKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKV--------EGDFFDVHQWIKN 383 (458)
T ss_dssp TCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEE--------SCBHHHHHHHHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEE--------CCCHHHHHHHHHh
Confidence 589999999999999999999999999887654321110000 1 1112222 2366777777888
Q ss_pred cCCCEEEeCCCcccccHHHHHHHHHCCCcee
Q 009323 142 RGCTMLHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 142 ~~~d~V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
.++|.++.+.. + ...+++.|++++
T Consensus 384 ~~pDl~ig~~~---~----~~~a~k~gip~~ 407 (458)
T 1mio_B 384 EGVDLLISNTY---G----KFIAREENIPFV 407 (458)
T ss_dssp SCCSEEEESGG---G----HHHHHHHTCCEE
T ss_pred cCCCEEEeCcc---h----HHHHHHcCCCEE
Confidence 88888884421 1 233445666654
No 354
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=76.27 E-value=2.9 Score=40.14 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=28.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 67 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRP 67 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 57899999 57799999999999999999986543
No 355
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=76.26 E-value=1.2 Score=43.27 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=49.3
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
||.|-=||+|.|..-..+++++++.|+.++++.-....+.....+++..+.+ ..+..+++..++.+++-++
T Consensus 3 mM~kigIIAG~G~LP~~iak~a~~~G~~~~ii~l~g~~d~~l~~~~~~~i~i---------g~~G~ii~~lk~~~v~~vv 73 (283)
T 4ggi_A 3 MMRKLGLIAGGGALPVELASHCEAAGRAFAVMRLRSFADPSLDRYPGADVGI---------GEFGKIFKALRAEGCDVVC 73 (283)
T ss_dssp -CCCCEEEECSSSTTTTTTTHHHHTTCCCCEEEETTTCCSTTTTSSEEEECT---------TCTTHHHHHHHHHTCCCEE
T ss_pred CCccEEEEEcCCccHHHHHHHHHHCCCCeEEEEeCCCCchhhhhCCceEEcH---------HHHHHHHHHHHHhchhhee
Confidence 4444467889999999999999999998877654433333334455554443 3456899999999987444
No 356
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=76.25 E-value=4 Score=40.58 Aligned_cols=141 Identities=13% Similarity=0.062 Sum_probs=75.6
Q ss_pred cEEEEEcCcHHHHH-HHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 72 EKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~kvLi~g~g~~a~~-ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
.||.|+|.|.++.. .++.+++. +++++++. +.+... .. +. + +....|.+.++++ ....+|+|+-
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~-d~~~~~--~~-~~--~-----~~~~~~~~~~~ll---~~~~vD~V~i 73 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVS-SSDASK--VH-AD--W-----PAIPVVSDPQMLF---NDPSIDLIVI 73 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEE-CSCHHH--HH-TT--C-----SSCCEESCHHHHH---HCSSCCEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEE-CCCHHH--HH-hh--C-----CCCceECCHHHHh---cCCCCCEEEE
Confidence 58999999999987 78888887 78888776 332211 11 11 0 1122366766665 3457999986
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC-ccCCCHHHHHHHHH--HhCCcEEE
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--ELGFPVMI 226 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~-~~~~s~~~~~~~~~--~ig~Pvvv 226 (537)
... .......+..+.+.|+.++.-.|-+. ...+=..+.+.+++.|+..--.+. +.......+++.++ .+|-+..+
T Consensus 74 ~tp-~~~H~~~~~~al~aGkhV~~EKPla~-~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~ 151 (352)
T 3kux_A 74 PTP-NDTHFPLAQSALAAGKHVVVDKPFTV-TLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVYF 151 (352)
T ss_dssp CSC-TTTHHHHHHHHHHTTCEEEECSSCCS-CHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEEEE
T ss_pred eCC-hHHHHHHHHHHHHCCCcEEEECCCcC-CHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhcCCCCceEEE
Confidence 542 11235666677788887653222111 111112344556667765433221 11122344555444 45555554
Q ss_pred Ee
Q 009323 227 KA 228 (537)
Q Consensus 227 Kp 228 (537)
..
T Consensus 152 ~~ 153 (352)
T 3kux_A 152 ES 153 (352)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 357
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.21 E-value=3.8 Score=39.70 Aligned_cols=34 Identities=6% Similarity=0.058 Sum_probs=29.2
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 59 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN 59 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999998654
No 358
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=76.19 E-value=11 Score=37.52 Aligned_cols=32 Identities=9% Similarity=0.164 Sum_probs=25.0
Q ss_pred CcEEEEEcCcHH-----HHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~-----a~~ii~aa~~~G~~vv~v~~ 102 (537)
++|||++..+.. ...+++++++.|++|.++..
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 458888864332 47899999999999999875
No 359
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=76.09 E-value=6.6 Score=36.98 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=28.2
Q ss_pred CcEEEEEcC-cH--HHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVANR-GE--IAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~-g~--~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.|+ |. ++..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 578999995 44 9999999999999999988654
No 360
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=76.04 E-value=8.2 Score=36.00 Aligned_cols=34 Identities=6% Similarity=-0.023 Sum_probs=29.4
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 47899999 57899999999999999999986543
No 361
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=76.00 E-value=4 Score=38.48 Aligned_cols=34 Identities=9% Similarity=0.111 Sum_probs=29.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 40 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTK 40 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999 57899999999999999999886543
No 362
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=75.92 E-value=4 Score=38.88 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=29.1
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
+.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 357899999 5779999999999999999988644
No 363
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=75.86 E-value=6.8 Score=37.19 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=29.4
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
...|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~ 61 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA 61 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457899999 5779999999999999999988543
No 364
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=75.77 E-value=4.4 Score=38.20 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=29.8
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
...|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457899999 5779999999999999999998654
No 365
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=75.74 E-value=6 Score=37.37 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999998654
No 366
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=75.71 E-value=5 Score=37.90 Aligned_cols=33 Identities=15% Similarity=0.008 Sum_probs=28.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC
Confidence 46899999 5789999999999999999988644
No 367
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=75.60 E-value=5.4 Score=38.06 Aligned_cols=33 Identities=18% Similarity=0.135 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999988644
No 368
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=75.55 E-value=2.8 Score=38.80 Aligned_cols=33 Identities=9% Similarity=0.063 Sum_probs=28.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
+|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5779999999999999999888654
No 369
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=75.53 E-value=3.2 Score=40.81 Aligned_cols=34 Identities=9% Similarity=0.154 Sum_probs=29.8
Q ss_pred CCCCcEEEEEcCcHHHHHHHHHHHHcCC--CEEEEe
Q 009323 68 TCRQEKILVANRGEIAVRVIRTAHEMGI--PCVAVY 101 (537)
Q Consensus 68 ~~~~~kvLi~g~g~~a~~ii~aa~~~G~--~vv~v~ 101 (537)
.+|++||.|+|.|.+|..+++.+++.|+ +|++++
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~d 65 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYD 65 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEE
Confidence 4567899999999999999999999999 777763
No 370
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=75.37 E-value=2.4 Score=43.53 Aligned_cols=33 Identities=6% Similarity=0.094 Sum_probs=28.3
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcC--CCEEEEec
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMG--IPCVAVYS 102 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G--~~vv~v~~ 102 (537)
|.|||+|+|+|.-+..+++.+++++ ++|++++.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 5689999999999999999999977 78888853
No 371
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=75.32 E-value=2.2 Score=41.45 Aligned_cols=33 Identities=12% Similarity=0.041 Sum_probs=30.2
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
|.++|+|+|+|..+..++..+++.|++|+++..
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence 467999999999999999999999999999954
No 372
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=75.21 E-value=5.2 Score=37.81 Aligned_cols=35 Identities=9% Similarity=0.092 Sum_probs=29.8
Q ss_pred CCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 69 CRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 69 ~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
...|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3357899999 5779999999999999999998654
No 373
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=75.20 E-value=1.4 Score=43.59 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=54.6
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcC---CCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMG---IPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G---~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
|+.||.|+|.|.++...++++++++ ++++++++ .+.. ....+++++- + ...|.+.++++ ....+|+
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d-~~~~-~a~~~a~~~~-~-----~~~~~~~~~ll---~~~~vD~ 69 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAA-RDLS-RAKEFAQKHD-I-----PKAYGSYEELA---KDPNVEV 69 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEEC-SSHH-HHHHHHHHHT-C-----SCEESSHHHHH---HCTTCCE
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEc-CCHH-HHHHHHHHcC-C-----CcccCCHHHHh---cCCCCCE
Confidence 4579999999999999999998875 46777753 2211 1122222210 0 01255666554 3457999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcee
Q 009323 147 LHPGYGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 147 V~p~~g~~se~~~~a~~~e~~gi~~~ 172 (537)
|+-..- .......+..+.+.|.+++
T Consensus 70 V~i~tp-~~~H~~~~~~al~~GkhVl 94 (334)
T 3ohs_X 70 AYVGTQ-HPQHKAAVMLCLAAGKAVL 94 (334)
T ss_dssp EEECCC-GGGHHHHHHHHHHTTCEEE
T ss_pred EEECCC-cHHHHHHHHHHHhcCCEEE
Confidence 986542 1123566666777887765
No 374
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=75.09 E-value=5.8 Score=37.07 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57899999 5789999999999999999988654
No 375
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=75.04 E-value=3.3 Score=40.69 Aligned_cols=88 Identities=16% Similarity=0.137 Sum_probs=52.1
Q ss_pred cEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
.||.|+|.|.++...++.+++. +++++++. +.+.. ....+++++ + ....|.+.++++ ...+|+|+-.
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~-d~~~~-~~~~~~~~~---~---~~~~~~~~~~~l----~~~~D~V~i~ 69 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIY-SRKLE-TAATFASRY---Q---NIQLFDQLEVFF----KSSFDLVYIA 69 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEE-CSSHH-HHHHHGGGS---S---SCEEESCHHHHH----TSSCSEEEEC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEE-eCCHH-HHHHHHHHc---C---CCeEeCCHHHHh----CCCCCEEEEe
Confidence 4899999999999999999887 57777665 22211 112233221 0 001255655554 4579999865
Q ss_pred CCcccccHHHHHHHHHCCCcee
Q 009323 151 YGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~ 172 (537)
... ......+..+.+.|.+++
T Consensus 70 tp~-~~h~~~~~~al~~gk~V~ 90 (325)
T 2ho3_A 70 SPN-SLHFAQAKAALSAGKHVI 90 (325)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCh-HHHHHHHHHHHHcCCcEE
Confidence 421 123455555666777654
No 376
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=74.92 E-value=2.3 Score=39.50 Aligned_cols=74 Identities=12% Similarity=0.097 Sum_probs=47.4
Q ss_pred CCcEEEEE--cCcHHHHHHHHHHHH-cCCCEEEEecCCCCCChhhhccCE----EEEcCCCCCCCCCCC----HHHHHHH
Q 009323 70 RQEKILVA--NRGEIAVRVIRTAHE-MGIPCVAVYSTIDKDALHVKLADE----SVCIGEAPSSQSYLL----IPNVLSA 138 (537)
Q Consensus 70 ~~~kvLi~--g~g~~a~~ii~aa~~-~G~~vv~v~~~~d~~~~~~~~ad~----~~~i~~~~~~~~~~~----~~~i~~~ 138 (537)
+++||.|+ |+|.....+++++++ +++++++|.++.+ .+....|.+ .+.+ ...+|.+ -+++++.
T Consensus 11 ~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~--a~~~~~A~~~gIp~~~~----~~~~~~~r~~~d~~~~~~ 84 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRE--CRAAEIAAEASVPVFTV----RLADHPSRDAWDVAITAA 84 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSC--CHHHHHHHHTTCCEEEC----CGGGSSSHHHHHHHHHHH
T ss_pred CCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCc--hHHHHHHHHcCCCEEEe----CcccccchhhhhHHHHHH
Confidence 35688888 888998999988765 4458888877776 333333322 2222 1122322 3467888
Q ss_pred HHHcCCCEEEe
Q 009323 139 AISRGCTMLHP 149 (537)
Q Consensus 139 a~~~~~d~V~p 149 (537)
.++.++|.|+.
T Consensus 85 l~~~~~Dlivl 95 (215)
T 3da8_A 85 TAAHEPDLVVS 95 (215)
T ss_dssp HHTTCCSEEEE
T ss_pred HHhhCCCEEEE
Confidence 88899998775
No 377
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=74.88 E-value=2.3 Score=44.29 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=30.1
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
||+|+|+|+|..++..+..|.+.|++|.++...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~ 33 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQR 33 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccC
Confidence 689999999999999999999999999999543
No 378
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=74.82 E-value=7.1 Score=36.20 Aligned_cols=33 Identities=24% Similarity=0.209 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 57899999 5789999999999999999988654
No 379
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=74.80 E-value=4.9 Score=39.33 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=30.9
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK 106 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~ 106 (537)
+||+++|.++.+...++++.+.|+++++|.++++.
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~~~~i~~Vvt~~d~ 35 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDN 35 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred CEEEEEEcCHHHHHHHHHHHHCCCcEEEEEcCCCC
Confidence 48999999999999999999999999999887664
No 380
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=74.77 E-value=2 Score=42.72 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=47.9
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|. +|+++..+.+......++ +|..+.. . +....+.+.++....++|.|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~----~--~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINP----F--EEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECT----T--TSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC----C--CcCHHHHHHHHcCCCCCCEE
Confidence 45789999999999999999999999 888885433222222222 4544421 1 11112344444333479999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-..|
T Consensus 241 id~~g 245 (348)
T 2d8a_A 241 LEFSG 245 (348)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 97665
No 381
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=74.76 E-value=6.3 Score=37.09 Aligned_cols=33 Identities=12% Similarity=0.135 Sum_probs=28.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 47899999 5789999999999999999988644
No 382
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=74.55 E-value=7.2 Score=39.19 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=25.4
Q ss_pred CcEEEEEcCcHH-----HHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~-----a~~ii~aa~~~G~~vv~v~~ 102 (537)
|+|||++..+.. ...+++++++.|++|.++.+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~ 56 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTA 56 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeC
Confidence 468888875543 47899999999999998863
No 383
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=74.47 E-value=2.8 Score=43.72 Aligned_cols=115 Identities=8% Similarity=0.102 Sum_probs=67.3
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCC-hhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDA-LHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~-~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
..++|+|+|+|.++..+++.+.+ ++.+.++..+.+... ....+.+..+..+ +..|.+-|. -+.-..+|+++
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~~r~~~la~~l~~~~Vi~G------D~td~~~L~-ee~i~~~D~~i 305 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNLQRAEKLSEELENTIVFCG------DAADQELLT-EENIDQVDVFI 305 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHCTTSEEEES------CTTCHHHHH-HTTGGGCSEEE
T ss_pred cccEEEEEcchHHHHHHHHHhhh-cCceEEEecCHHHHHHHHHHCCCceEEec------cccchhhHh-hcCchhhcEEE
Confidence 46899999999999999999865 688988865443221 1122333334333 344444333 33335689999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
...+-.-.|....-++.++|.+-+ +.... +.....++++.|+.+
T Consensus 306 a~T~~De~Ni~~~llAk~~gv~kv------Ia~vn-~~~~~~l~~~~gid~ 349 (461)
T 4g65_A 306 ALTNEDETNIMSAMLAKRMGAKKV------MVLIQ-RGAYVDLVQGGVIDV 349 (461)
T ss_dssp ECCSCHHHHHHHHHHHHHTTCSEE------EEECS-CHHHHHHHCSSSSCE
T ss_pred EcccCcHHHHHHHHHHHHcCCccc------ccccc-ccchhhhhhccccce
Confidence 877644334555556666665422 22222 333344566677664
No 384
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=74.41 E-value=5.8 Score=38.05 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=29.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47899999 57799999999999999999986543
No 385
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=74.39 E-value=6.7 Score=37.65 Aligned_cols=34 Identities=9% Similarity=0.217 Sum_probs=29.4
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999988654
No 386
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=74.36 E-value=2.8 Score=38.72 Aligned_cols=85 Identities=6% Similarity=0.010 Sum_probs=49.3
Q ss_pred CcEEEEEcCcHHHHHHHHH--HHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVRVIRT--AHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~a--a~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
.++|+|+|.|..|..+++. ... |++++.+. |.|+...........+. .+ +.+.+++++ ++|.|+
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~-D~dp~k~g~~i~gv~V~--------~~---~dl~ell~~-~ID~Vi 145 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFF-DVDPEKVGRPVRGGVIE--------HV---DLLPQRVPG-RIEIAL 145 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEE-ESCTTTTTCEETTEEEE--------EG---GGHHHHSTT-TCCEEE
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEE-eCCHHHHhhhhcCCeee--------cH---HhHHHHHHc-CCCEEE
Confidence 3689999999999999985 334 88888765 33333322223332221 12 345666666 899888
Q ss_pred eCCCcccccHHHHHHHHHCCCc
Q 009323 149 PGYGFLAENAVFVEMCREHGIN 170 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~ 170 (537)
-..... .....+..+.+.|+.
T Consensus 146 IA~Ps~-~~~ei~~~l~~aGi~ 166 (211)
T 2dt5_A 146 LTVPRE-AAQKAADLLVAAGIK 166 (211)
T ss_dssp ECSCHH-HHHHHHHHHHHHTCC
T ss_pred EeCCch-hHHHHHHHHHHcCCC
Confidence 543211 112455555556654
No 387
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=74.36 E-value=3.5 Score=40.65 Aligned_cols=147 Identities=10% Similarity=0.058 Sum_probs=83.9
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
+.||.|+|.|.++...++.+++. +++++++. +.+.. ....+++++ + ....|.+.++++ ....+|+|+-
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~~~~~---~---~~~~~~~~~~ll---~~~~~D~V~i 73 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIA-SRRLE-NAQKMAKEL---A---IPVAYGSYEELC---KDETIDIIYI 73 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEB-CSSSH-HHHHHHHHT---T---CCCCBSSHHHHH---HCTTCSEEEE
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEE-eCCHH-HHHHHHHHc---C---CCceeCCHHHHh---cCCCCCEEEE
Confidence 46899999999999999999996 67777665 32221 112233221 1 012366666654 3457999986
Q ss_pred CCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC-ccCCCHHHHHHHHH--HhCCcEEE
Q 009323 150 GYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--ELGFPVMI 226 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~-~~~~s~~~~~~~~~--~ig~Pvvv 226 (537)
..-. ......+..+.+.|..++.-.|-+. ...+=..+.+.+++.|+..-..+. +.......+++.++ .+|-+..+
T Consensus 74 ~tp~-~~h~~~~~~al~~gk~vl~EKP~~~-~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~i 151 (330)
T 3e9m_A 74 PTYN-QGHYSAAKLALSQGKPVLLEKPFTL-NAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGLGEILWV 151 (330)
T ss_dssp CCCG-GGHHHHHHHHHHTTCCEEECSSCCS-SHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTTCSEEEE
T ss_pred cCCC-HHHHHHHHHHHHCCCeEEEeCCCCC-CHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCCCCeEEE
Confidence 5421 1335666667778876653222111 011112345567888887644321 22233456667666 57777766
Q ss_pred EecC
Q 009323 227 KATA 230 (537)
Q Consensus 227 Kp~~ 230 (537)
....
T Consensus 152 ~~~~ 155 (330)
T 3e9m_A 152 QSVT 155 (330)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
No 388
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=74.05 E-value=10 Score=35.16 Aligned_cols=71 Identities=10% Similarity=0.005 Sum_probs=45.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHH-cCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHH---cCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHE-MGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAIS---RGCT 145 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~-~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~---~~~d 145 (537)
+|++||.| .+.++..+++.+.+ .|+.+++++.+....... . ..+..+ ..+.+.+.++++. .++|
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~--~--~~~~~D-------v~~~~~v~~~~~~~~~~~id 72 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAEN--L--KFIKAD-------LTKQQDITNVLDIIKNVSFD 72 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTT--E--EEEECC-------TTCHHHHHHHHHHTTTCCEE
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccccc--c--eEEecC-------cCCHHHHHHHHHHHHhCCCC
Confidence 57899999 57799999999988 788888876544312111 1 333332 4455555555533 3688
Q ss_pred EEEeCCC
Q 009323 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~p~~g 152 (537)
.++-.-|
T Consensus 73 ~lv~nAg 79 (244)
T 4e4y_A 73 GIFLNAG 79 (244)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 8886544
No 389
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=74.05 E-value=4.3 Score=40.20 Aligned_cols=77 Identities=14% Similarity=0.104 Sum_probs=47.5
Q ss_pred CCCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHH-HHHHHHHHcCCC
Q 009323 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIP-NVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~-~i~~~a~~~~~d 145 (537)
.+.++|||.|. |.++..+++.++.+|.+|++++.+.+......++ ++..+.+. +..+.. .+.++... ++|
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~------~~~~~~~~~~~~~~~-~~D 240 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFT------KEKDIVGAVLKATDG-GAH 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETT------TCSCHHHHHHHHHTS-CEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecC------ccHhHHHHHHHHhCC-CCC
Confidence 34679999997 8999999999999999988886443322222222 34333221 112333 33333333 799
Q ss_pred EEEeCCC
Q 009323 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~p~~g 152 (537)
.|+-..|
T Consensus 241 ~vi~~~g 247 (347)
T 2hcy_A 241 GVINVSV 247 (347)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 9997655
No 390
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=74.05 E-value=8.1 Score=36.13 Aligned_cols=33 Identities=18% Similarity=0.046 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999998644
No 391
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=74.02 E-value=3.2 Score=41.35 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=48.4
Q ss_pred CCCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
...++|||.|. |.++..+++.|+.+|.+++++..+.+......++ ++..+... +....+.+.+.....++|.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~------~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHR------EVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETT------STTHHHHHHHHHCTTCEEE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCC------CchHHHHHHHHcCCCCcEE
Confidence 34679999996 9999999999999999988886443322222222 34444321 1112344444443347899
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 243 vi~~~G 248 (351)
T 1yb5_A 243 IIEMLA 248 (351)
T ss_dssp EEESCH
T ss_pred EEECCC
Confidence 986654
No 392
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=74.02 E-value=6.3 Score=37.21 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=28.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 57899999 4679999999999999999988654
No 393
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=73.97 E-value=3 Score=41.85 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=47.7
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCC-EEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIP-CVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~-vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|.. |++++.+.+......++ +|..+... +....+.+.++... ++|.|
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~------~~~~~~~~~~~~~g-g~D~v 262 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK------TQDPVAAIKEITDG-GVNFA 262 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTS-CEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCC------ccCHHHHHHHhcCC-CCcEE
Confidence 467999999999999999999999995 77775443322222222 56555321 11113344444333 78999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-..|
T Consensus 263 id~~g 267 (371)
T 1f8f_A 263 LESTG 267 (371)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 96655
No 394
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=73.92 E-value=6.5 Score=37.04 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999988644
No 395
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=73.91 E-value=2.2 Score=41.47 Aligned_cols=33 Identities=9% Similarity=-0.039 Sum_probs=29.8
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
+++|+|+|+|..+..++..+++.|++++++...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 468999999999999999999999999999543
No 396
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=73.87 E-value=6 Score=38.05 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=29.3
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999988644
No 397
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=73.86 E-value=2.1 Score=42.07 Aligned_cols=77 Identities=14% Similarity=0.150 Sum_probs=48.8
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.| .|.++..+++.++.+|.+++++..+.+.......+ ++..+... +....+.+.+.....++|.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYR------EEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECC------CccHHHHHHHHhCCCCceEE
Confidence 467999999 69999999999999999988886443221111122 34444321 11223445444444579999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-..|
T Consensus 214 i~~~g 218 (327)
T 1qor_A 214 YDSVG 218 (327)
T ss_dssp EECSC
T ss_pred EECCc
Confidence 97766
No 398
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=73.78 E-value=3.4 Score=40.71 Aligned_cols=35 Identities=9% Similarity=-0.014 Sum_probs=28.8
Q ss_pred CCCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 68 ~~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.+.++||.|+|.|.++..++..+.+.|++|++++.
T Consensus 3 ~~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 3 SPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34478999999999999999999999999998843
No 399
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=73.74 E-value=8.8 Score=36.52 Aligned_cols=31 Identities=13% Similarity=0.069 Sum_probs=28.0
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
.|++||.| .+.++..+++.+.+.|++|++++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 57899999 57799999999999999999886
No 400
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=73.72 E-value=5.1 Score=40.19 Aligned_cols=32 Identities=9% Similarity=0.061 Sum_probs=28.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
+++|||.| .|-+|..+++.+.+.|++|++++.
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence 57899999 588999999999999999999853
No 401
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=73.71 E-value=9.9 Score=36.20 Aligned_cols=80 Identities=9% Similarity=-0.008 Sum_probs=47.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhh-c---cCEEEEcCCCCCCCCCCCHHHHHHHHHH-cCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVK-L---ADESVCIGEAPSSQSYLLIPNVLSAAIS-RGC 144 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~-~---ad~~~~i~~~~~~~~~~~~~~i~~~a~~-~~~ 144 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+....... + ......+. .+..+....+.+++.+.+ .++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELA--GDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEE--CCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEE--ecCCCHHHHHHHHHHHHHhCCC
Confidence 47899999 5779999999999999999998765543221111 1 11122111 111223344555554433 368
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.++-.-|
T Consensus 111 D~lvnnAg 118 (275)
T 4imr_A 111 DILVINAS 118 (275)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98886544
No 402
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=73.67 E-value=7.2 Score=36.67 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999988644
No 403
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=73.59 E-value=7.1 Score=36.70 Aligned_cols=33 Identities=6% Similarity=-0.001 Sum_probs=28.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999999988654
No 404
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=73.58 E-value=1.9 Score=39.90 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
++++||.|+|.|.++..+++.+.+.|+++++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIAN 53 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEE
Confidence 345799999999999999999999999998843
No 405
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=73.55 E-value=24 Score=33.24 Aligned_cols=33 Identities=9% Similarity=-0.049 Sum_probs=29.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence 57899999 5789999999999999999998644
No 406
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=73.44 E-value=2.7 Score=39.59 Aligned_cols=75 Identities=11% Similarity=-0.028 Sum_probs=45.4
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc---cCEEEEcCCCCCCCCCCCHHHHHHHHHHc--CC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL---ADESVCIGEAPSSQSYLLIPNVLSAAISR--GC 144 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~---ad~~~~i~~~~~~~~~~~~~~i~~~a~~~--~~ 144 (537)
||++||.| .+.++..+++.+.+.|++|++++.+.+.......+ ..+...+ +..+++.+++.+.+. ++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-------d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-------SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-------CCCSHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-------CHHHHHHHHHHHHHHhCCC
Confidence 47899999 57799999999999999999885443221111001 0111211 345566666554432 68
Q ss_pred CEEEeCCC
Q 009323 145 TMLHPGYG 152 (537)
Q Consensus 145 d~V~p~~g 152 (537)
|.++-.-|
T Consensus 74 D~lv~nAg 81 (254)
T 1zmt_A 74 DVLVSNDI 81 (254)
T ss_dssp CEEEEECC
T ss_pred CEEEECCC
Confidence 98886544
No 407
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=73.41 E-value=4.6 Score=37.83 Aligned_cols=32 Identities=6% Similarity=0.067 Sum_probs=28.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.|++||.| .|.++..+++.+.+.|++|++++.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 47899999 578999999999999999998864
No 408
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=73.32 E-value=5.3 Score=37.01 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=28.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|+++..+
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999999998654
No 409
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=73.31 E-value=3.7 Score=41.67 Aligned_cols=76 Identities=11% Similarity=-0.045 Sum_probs=47.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcC-CCEEEEecCCCCCChh-hhc-------cCEEEEcCCCCCCCCCCCHHHHHHHHH
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMG-IPCVAVYSTIDKDALH-VKL-------ADESVCIGEAPSSQSYLLIPNVLSAAI 140 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G-~~vv~v~~~~d~~~~~-~~~-------ad~~~~i~~~~~~~~~~~~~~i~~~a~ 140 (537)
.|+|||.| .|.+|..+++.+.+.| ++++++.......... ..+ ......+. -+..|.+.+..+..
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~-----~Dl~d~~~~~~~~~ 109 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFA-----LDIGSIEYDAFIKA 109 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEEC-----CCTTSHHHHHHHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEE-----EeCCCHHHHHHHHH
Confidence 57899999 6889999999999999 6888874322111000 000 01222221 13556666666666
Q ss_pred HcCCCEEEeCC
Q 009323 141 SRGCTMLHPGY 151 (537)
Q Consensus 141 ~~~~d~V~p~~ 151 (537)
..++|.|+-.-
T Consensus 110 ~~~~D~Vih~A 120 (399)
T 3nzo_A 110 DGQYDYVLNLS 120 (399)
T ss_dssp CCCCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 67899998553
No 410
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=73.28 E-value=6.3 Score=37.04 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=29.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQ 36 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999 57899999999999999999886543
No 411
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=73.27 E-value=12 Score=36.34 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=30.8
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
..++|.|+|-|.++..+++.++.+|++|++++...
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~ 155 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSS 155 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSC
T ss_pred ecchheeeccCchhHHHHHHHHhhCcEEEEEeccc
Confidence 35799999999999999999999999999885443
No 412
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=73.25 E-value=11 Score=34.75 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=27.6
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
.|++||.| .|.++..+++.+.+.|++|++++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 47899999 57899999999999999999884
No 413
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=73.24 E-value=3 Score=44.52 Aligned_cols=74 Identities=15% Similarity=0.038 Sum_probs=48.7
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
.+.++++|+|.|..+..+++.+++.|+++++++.+++........-+..+..+ +..+.+.+ +.+.-.++|+++
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~G------d~~~~~~L-~~a~i~~a~~vi 197 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYG------SPTDAHVL-AGLRVAAARSII 197 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEES------CTTCHHHH-HHTTGGGCSEEE
T ss_pred ccCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEe------CCCCHHHH-HhcCcccCCEEE
Confidence 34578999999999999999999999999999765442211111113334444 23444444 444445688888
Q ss_pred e
Q 009323 149 P 149 (537)
Q Consensus 149 p 149 (537)
.
T Consensus 198 ~ 198 (565)
T 4gx0_A 198 A 198 (565)
T ss_dssp E
T ss_pred E
Confidence 6
No 414
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=73.19 E-value=4.3 Score=37.24 Aligned_cols=61 Identities=8% Similarity=-0.048 Sum_probs=44.4
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~d~V~ 148 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+ + +..+.+.+.+++++. ++|.++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~-------D~~~~~~v~~~~~~~g~id~lv 64 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------L-------DISDEKSVYHYFETIGAFDHLI 64 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------C-------CTTCHHHHHHHHHHHCSEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------c-------CCCCHHHHHHHHHHhCCCCEEE
Confidence 47899999 577999999999999999998854332 1 244566666666654 588888
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-.-|
T Consensus 65 ~nAg 68 (223)
T 3uce_A 65 VTAG 68 (223)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6544
No 415
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=73.16 E-value=6.1 Score=36.97 Aligned_cols=75 Identities=13% Similarity=0.115 Sum_probs=46.6
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhccC--EEEEcCCCCCCCCCCCHHHHHHHHHHc----
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLAD--ESVCIGEAPSSQSYLLIPNVLSAAISR---- 142 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~ad--~~~~i~~~~~~~~~~~~~~i~~~a~~~---- 142 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+..... ..+.+ ..+.++ ..|.+.+.+++++.
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-------v~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN-------VTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECC-------TTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEe-------CCCHHHHHHHHHHHHHHc
Confidence 47899999 57799999999999999999986543211111 11111 233332 44555554444332
Q ss_pred -CCCEEEeCCC
Q 009323 143 -GCTMLHPGYG 152 (537)
Q Consensus 143 -~~d~V~p~~g 152 (537)
++|.++-.-|
T Consensus 82 g~iD~lv~nAg 92 (248)
T 3op4_A 82 GGVDILVNNAG 92 (248)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6999886654
No 416
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=73.11 E-value=3 Score=41.78 Aligned_cols=87 Identities=11% Similarity=0.117 Sum_probs=55.0
Q ss_pred cEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEeC
Q 009323 72 EKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHPG 150 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p~ 150 (537)
.||.|+|.|.++...++.+++. ++++++++ +.+... ...+.+ .....|.+.+++++ ...+|+|+-.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~-d~~~~~--~~~a~~-------~g~~~~~~~~~ll~---~~~~D~V~i~ 72 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVF-DILAEK--REAAAQ-------KGLKIYESYEAVLA---DEKVDAVLIA 72 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEE-CSSHHH--HHHHHT-------TTCCBCSCHHHHHH---CTTCCEEEEC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEE-cCCHHH--HHHHHh-------cCCceeCCHHHHhc---CCCCCEEEEc
Confidence 5899999999999999999987 78888775 222211 122211 11124667666653 4579999865
Q ss_pred CCcccccHHHHHHHHHCCCcee
Q 009323 151 YGFLAENAVFVEMCREHGINFI 172 (537)
Q Consensus 151 ~g~~se~~~~a~~~e~~gi~~~ 172 (537)
... ......+..+.+.|..++
T Consensus 73 tp~-~~h~~~~~~al~aGkhVl 93 (359)
T 3e18_A 73 TPN-DSHKELAISALEAGKHVV 93 (359)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCc-HHHHHHHHHHHHCCCCEE
Confidence 421 123556666667887665
No 417
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=73.08 E-value=3.6 Score=40.71 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=28.2
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcC-CCEEEEecCC
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMG-IPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G-~~vv~v~~~~ 104 (537)
.|+|||.|+ |.+|..+++.+.+.| ++|+++....
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 468999995 999999999999999 8999886543
No 418
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=72.95 E-value=3.8 Score=39.47 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=28.9
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
++||.|+|.|.++..+++.+.+.|++|++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 6799999999999999999999999998874
No 419
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=72.93 E-value=8 Score=36.85 Aligned_cols=33 Identities=15% Similarity=0.088 Sum_probs=28.6
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999988543
No 420
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=72.93 E-value=3.4 Score=40.01 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=27.9
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
++||+|+|.|.++..++..+.+.|++|++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLID 33 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEE
Confidence 4689999999999999999999999988874
No 421
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=72.92 E-value=21 Score=33.96 Aligned_cols=35 Identities=9% Similarity=0.218 Sum_probs=30.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.+
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 44 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAE 44 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChh
Confidence 47899999 577999999999999999999876554
No 422
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=72.91 E-value=3.9 Score=40.34 Aligned_cols=76 Identities=20% Similarity=0.230 Sum_probs=48.9
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEE-EEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHH-HHHHcCCCE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCV-AVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLS-AAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv-~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~-~a~~~~~d~ 146 (537)
..++|||.|.|.++...++.|+.+|..++ +++..++......++ +|+.+... ..+..+.++ +....++|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~-------~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSS-------EMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETT-------TSCHHHHHHHHGGGCSSEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCC-------CCCHHHHHHhhcccCCccc
Confidence 46799999999999999999999999875 444333322233333 56666421 223334433 334466888
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 233 v~d~~G 238 (346)
T 4a2c_A 233 ILETAG 238 (346)
T ss_dssp EEECSC
T ss_pred cccccc
Confidence 886665
No 423
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=72.84 E-value=3.8 Score=40.81 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=50.5
Q ss_pred CCCcEEEEE-cCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVA-NRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~-g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
...++|||. |.|.++..+++.|+.+|.+|++++.+.+......++ +|..+... +....+.+.++. ..++|.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~------~~~~~~~~~~~~-~~g~Dv 238 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYR------SEDFAAVIKAET-GQGVDI 238 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHH-SSCEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCC------chHHHHHHHHHh-CCCceE
Confidence 346799999 579999999999999999998886443322222222 45554321 112234455554 567999
Q ss_pred EEeCCCc
Q 009323 147 LHPGYGF 153 (537)
Q Consensus 147 V~p~~g~ 153 (537)
|+-..|.
T Consensus 239 vid~~g~ 245 (353)
T 4dup_A 239 ILDMIGA 245 (353)
T ss_dssp EEESCCG
T ss_pred EEECCCH
Confidence 9977663
No 424
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=72.82 E-value=5.9 Score=37.21 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5789999999999999999998654
No 425
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=72.81 E-value=12 Score=37.81 Aligned_cols=33 Identities=15% Similarity=0.112 Sum_probs=24.8
Q ss_pred CcEEEEEcCcHH-----HHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~g~~-----a~~ii~aa~~~G~~vv~v~~~ 103 (537)
++|||++..+.. ...+++++++.|++|.++.+.
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~ 44 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPP 44 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCH
Confidence 468988764332 468999999999999998654
No 426
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=72.80 E-value=7.2 Score=37.23 Aligned_cols=33 Identities=15% Similarity=0.055 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999999998644
No 427
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=72.80 E-value=4.1 Score=39.00 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=28.9
Q ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.|+ |.+|..+++.+.+.|++|+++..+
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 578999994 789999999999999999988654
No 428
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=72.69 E-value=11 Score=35.77 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=29.2
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5679999999999999999988654
No 429
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.68 E-value=25 Score=33.20 Aligned_cols=37 Identities=5% Similarity=-0.081 Sum_probs=30.4
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
|.....|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 3344468899999 577999999999999999999864
No 430
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=72.63 E-value=8.4 Score=36.78 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=28.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 47899999 577999999999999999998863
No 431
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=72.59 E-value=6.6 Score=39.27 Aligned_cols=77 Identities=17% Similarity=0.081 Sum_probs=47.7
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCH-HHHHHHHHHcCCCE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLI-PNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~-~~i~~~a~~~~~d~ 146 (537)
..++|||.|.|.++..+++.|+.+|. +|+++..+++......++ +|+.+... +...+. +.+.++.. .++|.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~~~~~~~~~~~~~~-~g~D~ 265 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN-----DHSEPISQVLSKMTN-GGVDF 265 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG-----GCSSCHHHHHHHHHT-SCBSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEecc-----ccchhHHHHHHHHhC-CCCCE
Confidence 46799999999999999999999999 677775433322222222 45544211 101223 33444333 37999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 266 vid~~g 271 (374)
T 1cdo_A 266 SLECVG 271 (374)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 997665
No 432
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=72.59 E-value=5 Score=38.07 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=27.5
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
.|++||.| .+.++..+++.+.+.|++|++++
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~ 56 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSH 56 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 56789999 57899999999999999999886
No 433
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=72.56 E-value=6.5 Score=39.38 Aligned_cols=77 Identities=13% Similarity=0.024 Sum_probs=48.1
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCH-HHHHHHHHHcCCCE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLI-PNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~-~~i~~~a~~~~~d~ 146 (537)
..++|||.|.|.++..+++.|+.+|. +|+++..+.+......++ +|..+... +...+. +.+.++.. .++|.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-----~~~~~~~~~v~~~~~-~g~Dv 268 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR-----ELDKPVQDVITELTA-GGVDY 268 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG-----GCSSCHHHHHHHHHT-SCBSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccc-----cccchHHHHHHHHhC-CCccE
Confidence 45799999999999999999999999 677775443332222233 45544211 000123 34444443 38999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 269 vid~~G 274 (376)
T 1e3i_A 269 SLDCAG 274 (376)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 997665
No 434
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=72.53 E-value=12 Score=37.19 Aligned_cols=82 Identities=11% Similarity=0.009 Sum_probs=43.3
Q ss_pred CCcEEEEEcC------cH---HHHHHHHHHHHcCCCEEEEecCCCCCC-hhh-hccCEEEEcCCCCC-CCCCC---CHHH
Q 009323 70 RQEKILVANR------GE---IAVRVIRTAHEMGIPCVAVYSTIDKDA-LHV-KLADESVCIGEAPS-SQSYL---LIPN 134 (537)
Q Consensus 70 ~~~kvLi~g~------g~---~a~~ii~aa~~~G~~vv~v~~~~d~~~-~~~-~~ad~~~~i~~~~~-~~~~~---~~~~ 134 (537)
+++|||++.. |. ....+++++++.|++|.++........ ... ......+.+..... ..-.. ....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHRK 98 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHHHH
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHHHH
Confidence 3468888873 21 356889999999999998876544321 000 00001111110000 00011 1256
Q ss_pred HHHHHHHcCCCEEEeCC
Q 009323 135 VLSAAISRGCTMLHPGY 151 (537)
Q Consensus 135 i~~~a~~~~~d~V~p~~ 151 (537)
+.+++++.++|.|+...
T Consensus 99 l~~~l~~~~~Dii~~~~ 115 (406)
T 2gek_A 99 VKKWIAEGDFDVLHIHE 115 (406)
T ss_dssp HHHHHHHHCCSEEEEEC
T ss_pred HHHHHHhcCCCEEEECC
Confidence 77888888999999654
No 435
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=72.44 E-value=5.1 Score=37.30 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=28.9
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 47899999 5889999999999999999988654
No 436
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=72.30 E-value=1.9 Score=42.76 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=46.3
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHc--CCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCC-HHHHHHHHHHcCCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEM--GIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLL-IPNVLSAAISRGCT 145 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~--G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~-~~~i~~~a~~~~~d 145 (537)
..++|||.|.|.++..+++.|+.+ |.+|+++..+.+......++ +|+.+. |.+ .+.+.++....++|
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~---------~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSE---------MKDAESLINKLTDGLGAS 240 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEEC---------HHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEec---------cccchHHHHHhhcCCCcc
Confidence 467999999999999999999999 99988875333222222222 454442 222 22232222223789
Q ss_pred EEEeCCC
Q 009323 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~p~~g 152 (537)
.|+-..|
T Consensus 241 ~vid~~g 247 (344)
T 2h6e_A 241 IAIDLVG 247 (344)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9997665
No 437
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=72.22 E-value=5.8 Score=37.71 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=28.0
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999 577999999999999999998764
No 438
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=72.09 E-value=21 Score=33.34 Aligned_cols=143 Identities=11% Similarity=0.056 Sum_probs=75.9
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE-e
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH-P 149 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~-p 149 (537)
+|++++= +|--+.-.+.-|++.|++|+.+...-.... |.+.+ ...+.+.+...|+..++.... .
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~------~s~~~--------h~~~~e~a~~~A~~LGIpl~~v~ 70 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENE------ESYMY--------HTINANLTDLQARALGIPLVKGF 70 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC----------------------CCSSSHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCC------Ccccc--------CCccHHHHHHHHHHcCCCEEEEE
Confidence 3555554 444444455567889999987643211110 11100 012234556667777776543 2
Q ss_pred CCCc-ccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEe
Q 009323 150 GYGF-LAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKA 228 (537)
Q Consensus 150 ~~g~-~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp 228 (537)
..|. ..|...+.+++...|+..+ ...++..-..|.+....|.++|+...-. ..-.+.+++.+-.-..||-.+|--
T Consensus 71 ~~g~~~~e~e~l~~~l~~~~i~~v--v~Gdi~s~yqr~r~e~vc~~~gl~~~~P--LW~~d~~~Ll~e~i~~G~~aiiv~ 146 (237)
T 3rjz_A 71 TQGEKEKEVEDLKRVLSGLKIQGI--VAGALASKYQRKRIEKVAKELGLEVYTP--AWGRDAKEYMRELLNLGFKIMVVG 146 (237)
T ss_dssp C------CHHHHHHHHTTSCCSEE--ECC---CCSHHHHHHHHHHHTTCEEECS--SSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCchHHHHHHHHHHHhcCCcEE--EECCcchHHHHHHHHHHHHHcCCEEEcc--ccCCCHHHHHHHHHHCCCEEEEEE
Confidence 2221 1123455566666666432 2344555566788888899999886554 334567776665567899876665
Q ss_pred cCCC
Q 009323 229 TAGG 232 (537)
Q Consensus 229 ~~g~ 232 (537)
++..
T Consensus 147 v~~~ 150 (237)
T 3rjz_A 147 VSAY 150 (237)
T ss_dssp EEST
T ss_pred EecC
Confidence 5433
No 439
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=72.05 E-value=6.8 Score=37.13 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=29.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+.+
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 69 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHP 69 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57899999 577999999999999999999875443
No 440
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=72.05 E-value=3.7 Score=42.27 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=30.2
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC--CEEEEecC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI--PCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~--~vv~v~~~ 103 (537)
+.++|+|+|+|..+..++..|++.|+ +|+++...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecC
Confidence 45789999999999999999999999 99988543
No 441
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=72.04 E-value=6.7 Score=39.24 Aligned_cols=77 Identities=19% Similarity=0.114 Sum_probs=47.2
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCH-HHHHHHHHHcCCCE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLI-PNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~-~~i~~~a~~~~~d~ 146 (537)
..++|||.|.|.++..+++.|+.+|. +|+++..+.+......++ +|+.+... +...+. +.+.++.. .++|.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~~~~~~~~~~~~~~-~g~D~ 264 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ-----DYKKPIQEVLTEMSN-GGVDF 264 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG-----GCSSCHHHHHHHHTT-SCBSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEeccc-----ccchhHHHHHHHHhC-CCCcE
Confidence 46799999999999999999999999 677775433322222222 45544211 001223 33333332 37999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 265 vid~~g 270 (374)
T 2jhf_A 265 SFEVIG 270 (374)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 997665
No 442
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=71.96 E-value=6.4 Score=36.70 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=28.6
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
|.|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 357899999 578999999999999999988764
No 443
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=71.88 E-value=3.3 Score=38.66 Aligned_cols=77 Identities=14% Similarity=0.057 Sum_probs=49.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhccCEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCCEE
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKLADESVCIGEAPSSQSYLLIPNVLSAAISR-GCTML 147 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~-~~d~V 147 (537)
.|+|||.| .+.++..+++.+.+.|++|++++.+.+..... ..+.+....+. -+..+.+.+.++.++. ++|.+
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEV-----CNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEE-----CCTTSHHHHHHHHHTCSCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEE-----cCCCCHHHHHHHHHhcCCCCEE
Confidence 57899999 57899999999999999999986543211111 11112111110 1345667777777665 58988
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-.-|
T Consensus 89 i~~Ag 93 (249)
T 3f9i_A 89 VCNAG 93 (249)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86554
No 444
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=71.87 E-value=6.3 Score=38.54 Aligned_cols=38 Identities=13% Similarity=0.009 Sum_probs=31.2
Q ss_pred cCCCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 66 KVTCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 66 ~~~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
|.....|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 4444467899999 5789999999999999999998643
No 445
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=71.68 E-value=3 Score=41.04 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=49.9
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|. |.++..+++.++.+|.++++++.+.+......++ ++..+... +....+.+.+.....++|.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~------~~~~~~~i~~~~~~~~~d~v 218 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYS------TQDFAEVVREITGGKGVDVV 218 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECC------CHHHHHHHHHHhCCCCCeEE
Confidence 4679999994 9999999999999999998886543221111122 34444321 11223455555544579999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-..|.
T Consensus 219 i~~~g~ 224 (333)
T 1wly_A 219 YDSIGK 224 (333)
T ss_dssp EECSCT
T ss_pred EECCcH
Confidence 977664
No 446
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=71.62 E-value=8.4 Score=38.28 Aligned_cols=32 Identities=22% Similarity=0.194 Sum_probs=25.0
Q ss_pred CcEEEEEcCcHH-----HHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEI-----AVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~-----a~~ii~aa~~~G~~vv~v~~ 102 (537)
|+|||++..+.. ...+++++++.|++|.++.+
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcC
Confidence 458998865433 46789999999999999864
No 447
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=71.56 E-value=21 Score=34.50 Aligned_cols=107 Identities=15% Similarity=0.065 Sum_probs=57.2
Q ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCCEE-EEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEEe
Q 009323 72 EKILVANR-GEIAVRVIRTAHEMGIPCV-AVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLHP 149 (537)
Q Consensus 72 ~kvLi~g~-g~~a~~ii~aa~~~G~~vv-~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~p 149 (537)
.+++|+|. |..+..+++.+++.|++.+ .+ ++.... ....... -|.+++++.+ +..+|+++-
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~V--nP~~~g--~~i~G~~----------vy~sl~el~~---~~~~Dv~ii 76 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGV--TPGKGG--QNVHGVP----------VFDTVKEAVK---ETDANASVI 76 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEE--CTTCTT--CEETTEE----------EESSHHHHHH---HHCCCEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEe--CCCCCC--ceECCEe----------eeCCHHHHhh---cCCCCEEEE
Confidence 46888896 8889999999999999844 34 333210 1111111 1555555443 346787764
Q ss_pred CCCcccccHHHHHHHHHCCCc-e-eCCCHHHHHHhcCHHHHHHHHHHCCCCC
Q 009323 150 GYGFLAENAVFVEMCREHGIN-F-IGPNPDSIRIMGDKSTARETMKNAGVPT 199 (537)
Q Consensus 150 ~~g~~se~~~~a~~~e~~gi~-~-~Gp~~~~i~~~~dK~~~r~~l~~~Gipv 199 (537)
..-. .......+.+.+.|++ + +.+.- + ...+...+.+.+++.|+.+
T Consensus 77 ~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G--~-~~~~~~~l~~~A~~~gi~v 124 (294)
T 2yv1_A 77 FVPA-PFAKDAVFEAIDAGIELIVVITEH--I-PVHDTMEFVNYAEDVGVKI 124 (294)
T ss_dssp CCCH-HHHHHHHHHHHHTTCSEEEECCSC--C-CHHHHHHHHHHHHHHTCEE
T ss_pred ccCH-HHHHHHHHHHHHCCCCEEEEECCC--C-CHHHHHHHHHHHHHcCCEE
Confidence 3211 0124455566667776 2 22210 0 0012455666777777743
No 448
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=71.47 E-value=5.4 Score=37.51 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=28.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+.|++|+++..+
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999999988644
No 449
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=71.27 E-value=4.6 Score=38.27 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=29.4
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5789999999999999999988654
No 450
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=71.14 E-value=6.9 Score=36.68 Aligned_cols=34 Identities=9% Similarity=0.082 Sum_probs=29.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+.
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSK 41 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 57899999 57899999999999999999886543
No 451
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=71.13 E-value=4.8 Score=40.79 Aligned_cols=78 Identities=10% Similarity=0.026 Sum_probs=49.4
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCC-HHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLL-IPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~-~~~i~~~a~~~~~d~V 147 (537)
..++|||.|.|.++..+++.|+.+|. +|++++.+.+......++--..+.. . +... .+.+.++....++|.|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~----~--~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDL----R--NSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEET----T--SSSCHHHHHHHHHSSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcC----C--CcchHHHHHHHHhCCCCCCEE
Confidence 46799999999999999999999999 7888864433222222222123321 1 1122 4555555444479999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-..|.
T Consensus 259 id~~g~ 264 (398)
T 2dph_A 259 VDAVGF 264 (398)
T ss_dssp EECSCT
T ss_pred EECCCC
Confidence 977664
No 452
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=71.12 E-value=4.6 Score=40.71 Aligned_cols=32 Identities=9% Similarity=0.098 Sum_probs=29.2
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
..+|+|+|+|..+..++..+++.|++|+++..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 46899999999999999999999999999953
No 453
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=71.08 E-value=4.4 Score=39.94 Aligned_cols=33 Identities=9% Similarity=-0.012 Sum_probs=28.6
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
...+||.|+|.|.++..++..+...|++|++++
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D 36 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEE
Confidence 346799999999999999999999999999984
No 454
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=71.04 E-value=3.5 Score=41.04 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=49.2
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.| .|.++..+++.|+.+|.++++++.+.+......++ +|..+... +....+.+.+.....++|.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~d~v 235 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYK------KEDFSEATLKFTKGAGVNLI 235 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETT------TSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecC------ChHHHHHHHHHhcCCCceEE
Confidence 467999999 69999999999999999988886443221111222 44444321 11223444444433479999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+-..|.
T Consensus 236 i~~~G~ 241 (354)
T 2j8z_A 236 LDCIGG 241 (354)
T ss_dssp EESSCG
T ss_pred EECCCc
Confidence 977664
No 455
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=71.02 E-value=14 Score=34.93 Aligned_cols=29 Identities=14% Similarity=0.358 Sum_probs=25.6
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
-+||.++|-|.++..+++. . +++.+.++.
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~ 40 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD 40 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe
Confidence 3699999999999999998 4 999988875
No 456
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=70.82 E-value=4.1 Score=39.94 Aligned_cols=33 Identities=21% Similarity=0.073 Sum_probs=28.6
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
|++||+|+|.|.++..++..+.+.|++|.++..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 457999999999999999999999999998853
No 457
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=70.81 E-value=13 Score=34.98 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=27.7
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
.|++||.| .+.++..+++.+.+.|++|++++
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~ 39 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTY 39 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 57899999 57799999999999999999884
No 458
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=70.79 E-value=6.6 Score=36.94 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=28.9
Q ss_pred CcEEEEEcC---cHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVANR---GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~---g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|+|||.|+ +.++..+++.+.+.|++|++++.+
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecc
Confidence 589999995 579999999999999999988654
No 459
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=70.76 E-value=4.8 Score=39.07 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=28.7
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
++||.|+|.|.++..++..+.+.|++|++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d 45 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVD 45 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 5799999999999999999999999998884
No 460
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=70.65 E-value=18 Score=33.82 Aligned_cols=70 Identities=13% Similarity=0.041 Sum_probs=43.9
Q ss_pred CcEEEEEcC-----------------cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHH
Q 009323 71 QEKILVANR-----------------GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIP 133 (537)
Q Consensus 71 ~~kvLi~g~-----------------g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~ 133 (537)
.|+|||.|+ |.+|..+++++.+.|++|++++............. ..+. ....+
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~-~~~~---------v~s~~ 72 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNL-SIRE---------ITNTK 72 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTE-EEEE---------CCSHH
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCe-EEEE---------HhHHH
Confidence 468888887 46899999999999999999986543221100011 1222 33555
Q ss_pred HHHHHHHH--cCCCEEEeC
Q 009323 134 NVLSAAIS--RGCTMLHPG 150 (537)
Q Consensus 134 ~i~~~a~~--~~~d~V~p~ 150 (537)
++.+.+.+ .++|.++-.
T Consensus 73 em~~~v~~~~~~~Dili~a 91 (232)
T 2gk4_A 73 DLLIEMQERVQDYQVLIHS 91 (232)
T ss_dssp HHHHHHHHHGGGCSEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEc
Confidence 55555543 358887744
No 461
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=70.51 E-value=5 Score=37.67 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=28.6
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHH-cCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHE-MGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~-~G~~vv~v~~~ 103 (537)
.|++||.| .|.++..+++.+.+ .|++|+++..+
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 47899999 58899999999999 99999988644
No 462
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=70.48 E-value=4 Score=41.73 Aligned_cols=34 Identities=6% Similarity=0.074 Sum_probs=29.6
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHH--cCCCEEEEecC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHE--MGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~--~G~~vv~v~~~ 103 (537)
|+++|+|+|+|..+...+..+++ .|++|++++..
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 45799999999999999999999 78999999644
No 463
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=70.48 E-value=7 Score=36.28 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=28.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|+++++++.+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5779999999999999999988654
No 464
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=70.22 E-value=4.9 Score=37.23 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=29.2
Q ss_pred cEEEEEcCcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 72 EKILVANRGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 72 ~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|+|+|+|..+..++..+.++|++|+++...
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 47999999999999999999999999999643
No 465
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=70.22 E-value=3.7 Score=40.62 Aligned_cols=77 Identities=18% Similarity=0.126 Sum_probs=48.6
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTM 146 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~ 146 (537)
.+.++|||.|.|.++..++..|+.+ |.+|+++++..+......++ +|..+... +....+.+.++....++|.
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~------~~~~~~~v~~~t~g~g~d~ 235 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG------DVNPVDEIKKITGGLGVQS 235 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-------CCCHHHHHHHHTTSSCEEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC------CCCHHHHhhhhcCCCCceE
Confidence 3467999999999998888888876 78888886554433333233 56655421 1223455666555556777
Q ss_pred EEeCC
Q 009323 147 LHPGY 151 (537)
Q Consensus 147 V~p~~ 151 (537)
++-..
T Consensus 236 ~~~~~ 240 (348)
T 4eez_A 236 AIVCA 240 (348)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 77443
No 466
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=70.20 E-value=5 Score=39.45 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=48.3
Q ss_pred CCCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChh-hhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCC
Q 009323 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALH-VKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCT 145 (537)
Q Consensus 69 ~~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~-~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d 145 (537)
.+.++|||.|. |.++..+++.|+.+|.+|++++.+.+..... .++ +|..+... +....+.+.++. ..++|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~-~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYK------NEDLAAGLKREC-PKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETT------TSCHHHHHHHHC-TTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECC------CHHHHHHHHHhc-CCCce
Confidence 34679999997 9999999999999999998886443322222 222 35444321 111233344433 34699
Q ss_pred EEEeCCC
Q 009323 146 MLHPGYG 152 (537)
Q Consensus 146 ~V~p~~g 152 (537)
.|+-..|
T Consensus 221 ~vi~~~g 227 (336)
T 4b7c_A 221 VFFDNVG 227 (336)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9996655
No 467
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=70.16 E-value=3.8 Score=39.35 Aligned_cols=34 Identities=12% Similarity=0.043 Sum_probs=28.7
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
..|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 357899999 5779999999999999998887543
No 468
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=70.15 E-value=8.1 Score=36.56 Aligned_cols=32 Identities=19% Similarity=0.375 Sum_probs=28.4
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999 578999999999999999998865
No 469
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=70.14 E-value=4.9 Score=39.73 Aligned_cols=73 Identities=10% Similarity=0.053 Sum_probs=46.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHc-CC-CEEEEecCCCCCCh-hhhc--cC-EEEEcCCCCCCCCCCCHHHHHHHHHHcC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEM-GI-PCVAVYSTIDKDAL-HVKL--AD-ESVCIGEAPSSQSYLLIPNVLSAAISRG 143 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~-G~-~vv~v~~~~d~~~~-~~~~--ad-~~~~i~~~~~~~~~~~~~~i~~~a~~~~ 143 (537)
.|+|||.| .|.+|..+++.+.+. |+ +|+++..+...... ...+ .. +.+.. +..|.+.+.++.+ +
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~-------Dl~d~~~l~~~~~--~ 91 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIG-------DVRDLERLNYALE--G 91 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEEC-------CTTCHHHHHHHTT--T
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEEC-------CCCCHHHHHHHHh--c
Confidence 57999999 589999999999999 98 88887543221100 0011 11 22222 3566777777664 6
Q ss_pred CCEEEeCCC
Q 009323 144 CTMLHPGYG 152 (537)
Q Consensus 144 ~d~V~p~~g 152 (537)
+|.|+-.-+
T Consensus 92 ~D~Vih~Aa 100 (344)
T 2gn4_A 92 VDICIHAAA 100 (344)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999886544
No 470
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=70.01 E-value=11 Score=35.24 Aligned_cols=34 Identities=18% Similarity=0.367 Sum_probs=29.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
.|++||.| .|.++..+++.+.+.|++|++++.+.
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 48 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA 48 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcc
Confidence 47899999 57899999999999999999986533
No 471
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=69.84 E-value=9.7 Score=36.94 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=28.6
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
..||||+|.|..+..+++.+.+.|+-.+.+. |.|
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lv-D~D 69 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLF-DYD 69 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEE-CCC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEE-CCC
Confidence 4689999999999999999999999766554 444
No 472
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=69.82 E-value=4.1 Score=40.63 Aligned_cols=74 Identities=12% Similarity=0.001 Sum_probs=47.4
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
..++|||.|.|.++..+++.|+.+|.+|+++..+.+......++ +|..+... + ..+. .+.+. .++|.|+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~-----~-~~~~---~~~~~-~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATL-----E-EGDW---GEKYF-DTFDLIV 248 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGG-----G-TSCH---HHHSC-SCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCc-----C-chHH---HHHhh-cCCCEEE
Confidence 45799999999999999999999999988886544433222222 56555321 0 0021 11111 4799998
Q ss_pred eCCCc
Q 009323 149 PGYGF 153 (537)
Q Consensus 149 p~~g~ 153 (537)
-..|.
T Consensus 249 d~~g~ 253 (360)
T 1piw_A 249 VCASS 253 (360)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 76653
No 473
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=69.80 E-value=15 Score=33.29 Aligned_cols=45 Identities=11% Similarity=0.066 Sum_probs=34.1
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhccCEEEE
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVC 119 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~ad~~~~ 119 (537)
++||.|+|.|.++..+++.+.+.|++|++++.+.+ ...-+|-.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----~~~~aD~vi~ 63 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----ATTLGEIVIM 63 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----CSSCCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----HhccCCEEEE
Confidence 56899999999999999999999999888854332 2344565443
No 474
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=69.76 E-value=5 Score=38.51 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=28.5
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEe
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
|++||.|+|. |.++..+++.+.+.|++|++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~ 42 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIE 42 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEE
Confidence 3579999999 9999999999999999888763
No 475
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=69.74 E-value=4.1 Score=43.60 Aligned_cols=37 Identities=14% Similarity=0.004 Sum_probs=31.4
Q ss_pred CCCCcEEEEEcCcHHHHHHHHHHHHc--CCCEEEEecCC
Q 009323 68 TCRQEKILVANRGEIAVRVIRTAHEM--GIPCVAVYSTI 104 (537)
Q Consensus 68 ~~~~~kvLi~g~g~~a~~ii~aa~~~--G~~vv~v~~~~ 104 (537)
.+++++|+|+|+|..+...+..+++. |++|+++....
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 44568999999999999999999998 89999995443
No 476
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=69.63 E-value=4.5 Score=38.94 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=28.3
Q ss_pred CCCCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEe
Q 009323 68 TCRQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 68 ~~~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
....|++||.| .+.++..+++.+.+.|++|++++
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEc
Confidence 33457899999 57799999999999999999986
No 477
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=69.57 E-value=4 Score=41.30 Aligned_cols=33 Identities=15% Similarity=0.032 Sum_probs=29.3
Q ss_pred CcEEEEEcCcHHHHHHHHHHHH---cCCCEEEEecC
Q 009323 71 QEKILVANRGEIAVRVIRTAHE---MGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~---~G~~vv~v~~~ 103 (537)
|++|+|+|+|..+..++..+++ .|++|++++..
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~ 36 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKS 36 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCC
Confidence 4789999999999999999999 89999999644
No 478
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=69.56 E-value=6.3 Score=39.40 Aligned_cols=77 Identities=17% Similarity=0.088 Sum_probs=47.5
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-CEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCH-HHHHHHHHHcCCCE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGI-PCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLI-PNVLSAAISRGCTM 146 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~-~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~-~~i~~~a~~~~~d~ 146 (537)
..++|||.|.|.++..+++.|+.+|. +|+++..+.+......++ +|+.+... +...+. +.+.++.. .++|.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-----~~~~~~~~~i~~~t~-gg~Dv 264 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK-----DYDKPIYEVICEKTN-GGVDY 264 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG-----GCSSCHHHHHHHHTT-SCBSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecc-----cccchHHHHHHHHhC-CCCCE
Confidence 46799999999999999999999999 577775443332222233 45544211 000122 33433333 37999
Q ss_pred EEeCCC
Q 009323 147 LHPGYG 152 (537)
Q Consensus 147 V~p~~g 152 (537)
|+-..|
T Consensus 265 vid~~g 270 (373)
T 1p0f_A 265 AVECAG 270 (373)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 997665
No 479
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=69.55 E-value=6.5 Score=38.00 Aligned_cols=72 Identities=28% Similarity=0.361 Sum_probs=47.3
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|. |.++..+++.|+.+|.+|+++..+.+......++ +|..+. +.+.+.+.+.. .++|.|
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~---------~~~~~~~~~~~--~~~d~v 193 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAAT---------YAEVPERAKAW--GGLDLV 193 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEE---------GGGHHHHHHHT--TSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEE---------CCcchhHHHHh--cCceEE
Confidence 4679999997 9999999999999999998887654433322222 454442 22212232222 579999
Q ss_pred EeCCCc
Q 009323 148 HPGYGF 153 (537)
Q Consensus 148 ~p~~g~ 153 (537)
+- .|.
T Consensus 194 id-~g~ 198 (302)
T 1iz0_A 194 LE-VRG 198 (302)
T ss_dssp EE-CSC
T ss_pred EE-CCH
Confidence 97 664
No 480
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=69.47 E-value=8.2 Score=36.82 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=28.3
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999999988654
No 481
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=69.44 E-value=23 Score=35.66 Aligned_cols=124 Identities=14% Similarity=0.201 Sum_probs=75.9
Q ss_pred CCCCCHHHHHHHHHHcCCCEEEeC----------CC--c------------------cc-cc-HHHHHHHHHCCCceeCC
Q 009323 127 QSYLLIPNVLSAAISRGCTMLHPG----------YG--F------------------LA-EN-AVFVEMCREHGINFIGP 174 (537)
Q Consensus 127 ~~~~~~~~i~~~a~~~~~d~V~p~----------~g--~------------------~s-e~-~~~a~~~e~~gi~~~Gp 174 (537)
.+..-..++++.+++.++|+|=-+ +. | ++ |. ..+.+++++.|+.|+-.
T Consensus 41 Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~st 120 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLST 120 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECB
T ss_pred ccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEc
Confidence 344445667788888888887522 11 1 11 11 46778888899988732
Q ss_pred CHHHHHHhcCHHHHHHHHHHCCCCCCCCcCccCCCHHHHHHHHHHhCCcEEEEecCCCCCccEEEeCCHHHHHHHHHHHH
Q 009323 175 NPDSIRIMGDKSTARETMKNAGVPTVPGSDGLLQSTEEAVKLADELGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAK 254 (537)
Q Consensus 175 ~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~~~~~s~~~~~~~~~~ig~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~ 254 (537)
. .|.... +++.+.|++.-+--....+|..-++.. .+.|-|+++| +|+. +.+|+..+++.+.
T Consensus 121 p-------fD~~sv-d~l~~~~vd~~KIgS~~~~N~pLL~~v-a~~gKPViLS-------tGma---Tl~Ei~~Ave~i~ 181 (385)
T 1vli_A 121 V-------CDEGSA-DLLQSTSPSAFKIASYEINHLPLLKYV-ARLNRPMIFS-------TAGA---EISDVHEAWRTIR 181 (385)
T ss_dssp C-------CSHHHH-HHHHTTCCSCEEECGGGTTCHHHHHHH-HTTCSCEEEE-------CTTC---CHHHHHHHHHHHH
T ss_pred c-------CCHHHH-HHHHhcCCCEEEECcccccCHHHHHHH-HhcCCeEEEE-------CCCC---CHHHHHHHHHHHH
Confidence 2 233333 356777776533211456676655544 4579999999 4652 8899999998876
Q ss_pred HHHHHhcCCCcEEEEeccCC
Q 009323 255 SEAAAAFGNDGVYLEKYVQN 274 (537)
Q Consensus 255 ~~~~~~~~~~~~lvEe~I~g 274 (537)
.. |+.++++-+.+..
T Consensus 182 ~~-----Gn~~iiLlhc~s~ 196 (385)
T 1vli_A 182 AE-----GNNQIAIMHCVAK 196 (385)
T ss_dssp TT-----TCCCEEEEEECSS
T ss_pred HC-----CCCcEEEEeccCC
Confidence 43 3445555554444
No 482
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=69.44 E-value=8.9 Score=41.10 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=27.4
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEe
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVY 101 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~ 101 (537)
..||||+|.|..|..+++.+.+.|+..+.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLv 356 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFV 356 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 4689999999999999999999999766553
No 483
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=69.27 E-value=5.1 Score=39.51 Aligned_cols=75 Identities=20% Similarity=0.053 Sum_probs=46.8
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
..++|||.|.|.++..+++.|+.+|.+|+++..+.+......++ +|..+.. . +....+.+.++. .++|.|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~----~--~~~~~~~~~~~~--~~~d~vi 235 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNP----L--KEDAAKFMKEKV--GGVHAAV 235 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECT----T--TSCHHHHHHHHH--SSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecC----C--CccHHHHHHHHh--CCCCEEE
Confidence 45799999999999999999999999988885333221212222 3443321 1 111123444443 5799999
Q ss_pred eCCC
Q 009323 149 PGYG 152 (537)
Q Consensus 149 p~~g 152 (537)
-..|
T Consensus 236 d~~g 239 (339)
T 1rjw_A 236 VTAV 239 (339)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 7665
No 484
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=69.22 E-value=4.6 Score=39.42 Aligned_cols=32 Identities=6% Similarity=-0.039 Sum_probs=29.1
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
++||.|+|.|.++..+++.+.+.|++|++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeC
Confidence 57999999999999999999999999888743
No 485
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=69.19 E-value=3.3 Score=42.86 Aligned_cols=80 Identities=13% Similarity=0.117 Sum_probs=50.0
Q ss_pred CCCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCC--------CC-------
Q 009323 69 CRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSY--------LL------- 131 (537)
Q Consensus 69 ~~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~--------~~------- 131 (537)
...++|||.|. |.++..+++.|+.+|.+++++....+......++ +|..+... ..++ .+
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~----~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRN----AEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETT----TTTCCSEEETTEECHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecC----cCcccccccccccchHHHHHH
Confidence 44679999997 9999999999999999998886433322222223 56555421 1111 11
Q ss_pred HHHHHHHHHHcCCCEEEeCCC
Q 009323 132 IPNVLSAAISRGCTMLHPGYG 152 (537)
Q Consensus 132 ~~~i~~~a~~~~~d~V~p~~g 152 (537)
.+.+.++....++|.|+-..|
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC
T ss_pred HHHHHHHhCCCCCcEEEEcCC
Confidence 133444433357999997665
No 486
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=69.15 E-value=22 Score=34.35 Aligned_cols=72 Identities=13% Similarity=0.018 Sum_probs=45.9
Q ss_pred cEEEEEc-CcHHHHHHHHHHHHc---C---CCEEEEecCCCCCC-hhh-hc---cC-EEEEcCCCCCCCCCCCHHHHHHH
Q 009323 72 EKILVAN-RGEIAVRVIRTAHEM---G---IPCVAVYSTIDKDA-LHV-KL---AD-ESVCIGEAPSSQSYLLIPNVLSA 138 (537)
Q Consensus 72 ~kvLi~g-~g~~a~~ii~aa~~~---G---~~vv~v~~~~d~~~-~~~-~~---ad-~~~~i~~~~~~~~~~~~~~i~~~ 138 (537)
|||||.| .|.+|..+++.+.+. | ++|++++....... ... .+ .. +.+.. +..+.+.+.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 73 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG-------DIRDAGLLARE 73 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEEC-------CTTCHHHHHHH
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEc-------CCCCHHHHHHH
Confidence 3799999 599999999999996 8 89998864332111 111 11 11 22222 35566677666
Q ss_pred HHHcCCCEEEeCCC
Q 009323 139 AISRGCTMLHPGYG 152 (537)
Q Consensus 139 a~~~~~d~V~p~~g 152 (537)
+ .++|.|+-.-+
T Consensus 74 ~--~~~d~Vih~A~ 85 (337)
T 1r6d_A 74 L--RGVDAIVHFAA 85 (337)
T ss_dssp T--TTCCEEEECCS
T ss_pred h--cCCCEEEECCC
Confidence 6 57999886544
No 487
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=69.14 E-value=3.9 Score=42.21 Aligned_cols=34 Identities=6% Similarity=0.008 Sum_probs=29.7
Q ss_pred CcEEEEEcCcHHHHHHHHHHHHc--CCCEEEEecCC
Q 009323 71 QEKILVANRGEIAVRVIRTAHEM--GIPCVAVYSTI 104 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~ii~aa~~~--G~~vv~v~~~~ 104 (537)
.++|+|+|+|..+...+..+++. |++|+++....
T Consensus 2 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 2 SLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 46999999999999999999998 99999995443
No 488
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=69.07 E-value=8.9 Score=36.58 Aligned_cols=33 Identities=9% Similarity=0.092 Sum_probs=28.5
Q ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 70 RQEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 70 ~~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
..|++||.| .|.++..+++.+.+.|++|+++..
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r 76 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISR 76 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcC
Confidence 357899999 578999999999999999998753
No 489
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=69.04 E-value=5.9 Score=37.15 Aligned_cols=32 Identities=13% Similarity=0.110 Sum_probs=28.1
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 38 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI 38 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 57899999 578999999999999999998854
No 490
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=69.02 E-value=19 Score=37.67 Aligned_cols=35 Identities=9% Similarity=0.132 Sum_probs=30.4
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecCCC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYSTID 105 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~~d 105 (537)
+|||||.| .|-+|..+++.+.+.|++|+++.....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~ 182 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP 182 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46899999 699999999999999999999875543
No 491
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=69.01 E-value=5.4 Score=39.12 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=29.7
Q ss_pred CCCCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecC
Q 009323 68 TCRQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 68 ~~~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.+.+++|||.|+ |.+|..+++.+.+.|++|+++...
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344679999995 999999999999999999998654
No 492
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=68.99 E-value=4.2 Score=39.74 Aligned_cols=114 Identities=11% Similarity=0.096 Sum_probs=61.5
Q ss_pred CcEEEEEcCcHHHHH-HHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 71 QEKILVANRGEIAVR-VIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 71 ~~kvLi~g~g~~a~~-ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
+.||.|+|.|.++.. +++.+++. |++++++. +.+... ...+++++ +. + .|.+.+.+ ...+|+|+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~-d~~~~~-~~~~~~~~---g~-~---~~~~~~~l-----~~~~D~V~ 70 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAW-SPTRAK-ALPICESW---RI-P---YADSLSSL-----AASCDAVF 70 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEE-CSSCTT-HHHHHHHH---TC-C---BCSSHHHH-----HTTCSEEE
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEE-CCCHHH-HHHHHHHc---CC-C---ccCcHHHh-----hcCCCEEE
Confidence 358999999999986 88888774 77887665 333222 11222211 10 1 25555544 35799999
Q ss_pred eCCCcccccHHHHHHHHHCCCceeCCCHHHHHHhcCHHHHHHHHHHCCCCCC
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIGPNPDSIRIMGDKSTARETMKNAGVPTV 200 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~Gp~~~~i~~~~dK~~~r~~l~~~Gipvp 200 (537)
-.... ......+..+.+.|..++.-.+-+. ...+-..+.+.+++.|+..-
T Consensus 71 i~tp~-~~h~~~~~~al~~G~~v~~eKP~~~-~~~~~~~l~~~a~~~g~~~~ 120 (319)
T 1tlt_A 71 VHSST-ASHFDVVSTLLNAGVHVCVDKPLAE-NLRDAERLVELAARKKLTLM 120 (319)
T ss_dssp ECSCT-THHHHHHHHHHHTTCEEEEESSSCS-SHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCc-hhHHHHHHHHHHcCCeEEEeCCCCC-CHHHHHHHHHHHHHcCCeEE
Confidence 65321 1224555556667876553111111 01122334555667776653
No 493
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=68.93 E-value=9.6 Score=37.65 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=30.5
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCC
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 104 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~ 104 (537)
..++|.|+|-|.+|..+++.++.+|++|++++...
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~ 179 (331)
T 1xdw_A 145 RNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFE 179 (331)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 36799999999999999999999999988875433
No 494
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=68.93 E-value=7.4 Score=38.12 Aligned_cols=77 Identities=19% Similarity=0.182 Sum_probs=46.4
Q ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 70 RQEKILVANR-GEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 70 ~~~kvLi~g~-g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
..++|||.|. |.++..+++.++..|.++++++.+.+......++ ++..+... +..+..+.+..+...++|.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~------~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYK------TVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETT------SCSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecC------CHHHHHHHHHHHhCCCCeEE
Confidence 4679999996 9999999999999999988886433221111122 34333321 11233332222222468999
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-..|
T Consensus 219 i~~~g 223 (333)
T 1v3u_A 219 FDNVG 223 (333)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 97665
No 495
>3k1t_A Glutamate--cysteine ligase GSHA; putative gamma-glutamylcysteine synthetase; HET: MSE; 1.90A {Methylobacillus flagellatus KT}
Probab=68.91 E-value=4.1 Score=40.85 Aligned_cols=51 Identities=25% Similarity=0.361 Sum_probs=37.4
Q ss_pred EEEEecCCCCCccEEEeCCHHHHHHHHHHHHHHHH---HhcCCCcEEEEeccCC
Q 009323 224 VMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAA---AAFGNDGVYLEKYVQN 274 (537)
Q Consensus 224 vvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~---~~~~~~~~lvEe~I~g 274 (537)
|+||+..|+-|.||..|++.+|+...=++.+..-. ....-.+++|||=|.-
T Consensus 280 V~VKADaGTYGMGImtV~s~~ev~~LNrK~RnKM~~~Keg~~v~~VIIQEGV~T 333 (432)
T 3k1t_A 280 VIVKADAGTYGMGIMTVKSADDVRDLNRKQRNKMSVVKEGLKVSEVILQEGVYT 333 (432)
T ss_dssp EEEEEECGGGCEEEEEESSGGGGSSCCHHHHHHHHCSSSSSCCCEEEEEECCCC
T ss_pred EEEEcCCCCCCceEEEecCHHHHHHHhHHhhhhhhhccCCCccceEEEecCcch
Confidence 89999999999999999999998765444332211 1112358999997775
No 496
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=68.87 E-value=6.8 Score=38.55 Aligned_cols=76 Identities=16% Similarity=0.062 Sum_probs=48.2
Q ss_pred CCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEecCCCCCChhhhc-cCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEE
Q 009323 69 CRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKL-ADESVCIGEAPSSQSYLLIPNVLSAAISRGCTML 147 (537)
Q Consensus 69 ~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~~~d~~~~~~~~-ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V 147 (537)
...++|||.|.|.++..+++.|+.+|.+|++++.+.+......++ +|..+... +....+.+.+ . ..++|.|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~------~~~~~~~~~~-~-~g~~d~v 236 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNAR------DTDPAAWLQK-E-IGGAHGV 236 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETT------TSCHHHHHHH-H-HSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCC------CcCHHHHHHH-h-CCCCCEE
Confidence 346799999999999999999999999998886544332222333 45555321 1112334444 2 2378888
Q ss_pred EeCCC
Q 009323 148 HPGYG 152 (537)
Q Consensus 148 ~p~~g 152 (537)
+-..|
T Consensus 237 id~~g 241 (340)
T 3s2e_A 237 LVTAV 241 (340)
T ss_dssp EESSC
T ss_pred EEeCC
Confidence 85543
No 497
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=68.85 E-value=4.6 Score=42.09 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=29.0
Q ss_pred CCCCcEEEEEcCcHHHHHHHHHHHHcCCCEEEEec
Q 009323 68 TCRQEKILVANRGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 68 ~~~~~kvLi~g~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.+|..+|+|+|+|..+..++..|.+.|++|+++..
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk 56 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEK 56 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 34446799999999999999999999999999964
No 498
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=68.83 E-value=4.1 Score=40.35 Aligned_cols=141 Identities=13% Similarity=0.132 Sum_probs=73.7
Q ss_pred CCcEEEEEcCcHHHHHHHHHHHHc-CCCEEEEecCCCCCChhhhccCEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCEEE
Q 009323 70 RQEKILVANRGEIAVRVIRTAHEM-GIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLLIPNVLSAAISRGCTMLH 148 (537)
Q Consensus 70 ~~~kvLi~g~g~~a~~ii~aa~~~-G~~vv~v~~~~d~~~~~~~~ad~~~~i~~~~~~~~~~~~~~i~~~a~~~~~d~V~ 148 (537)
|+.||.|+|.|.++...++++++. +++++.++ +.+.. ....+++.+ + ....|.+.++++ ....+|+|+
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~-d~~~~-~~~~~~~~~---~---~~~~~~~~~~ll---~~~~~D~V~ 69 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAIS-DVRED-RLREMKEKL---G---VEKAYKDPHELI---EDPNVDAVL 69 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEE-CSCHH-HHHHHHHHH---T---CSEEESSHHHHH---HCTTCCEEE
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEE-CCCHH-HHHHHHHHh---C---CCceeCCHHHHh---cCCCCCEEE
Confidence 456999999999999999999886 67777665 22211 111222211 0 001255655554 345799998
Q ss_pred eCCCcccccHHHHHHHHHCCCceeC-----CCHHHHHHhcCHHHHHHHHHHCCCCCCCCcC-ccCCCHHHHHHHHH--Hh
Q 009323 149 PGYGFLAENAVFVEMCREHGINFIG-----PNPDSIRIMGDKSTARETMKNAGVPTVPGSD-GLLQSTEEAVKLAD--EL 220 (537)
Q Consensus 149 p~~g~~se~~~~a~~~e~~gi~~~G-----p~~~~i~~~~dK~~~r~~l~~~Gipvp~~~~-~~~~s~~~~~~~~~--~i 220 (537)
-.... ......+..+.+.|..++. .+.+.. ..+.+++++.|+..-..+. +.......+++..+ .+
T Consensus 70 i~tp~-~~h~~~~~~al~~gk~v~~EKP~~~~~~e~------~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i 142 (344)
T 3ezy_A 70 VCSST-NTHSELVIACAKAKKHVFCEKPLSLNLADV------DRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI 142 (344)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEEESCSCSCHHHH------HHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred EcCCC-cchHHHHHHHHhcCCeEEEECCCCCCHHHH------HHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence 65421 1234555666677876552 222222 2234455666665433221 11222344444444 35
Q ss_pred CCcEEEEe
Q 009323 221 GFPVMIKA 228 (537)
Q Consensus 221 g~PvvvKp 228 (537)
|-+..+..
T Consensus 143 G~i~~~~~ 150 (344)
T 3ezy_A 143 GKPHVLRI 150 (344)
T ss_dssp SSEEEEEE
T ss_pred CCeEEEEE
Confidence 55555554
No 499
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=68.75 E-value=9.5 Score=35.98 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=28.8
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEecC
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYST 103 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~~ 103 (537)
.|++||.| .+.++..+++.+.+.|++|++++.+
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999 5779999999999999999988654
No 500
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=68.74 E-value=7.2 Score=36.31 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=28.2
Q ss_pred CcEEEEEc-CcHHHHHHHHHHHHcCCCEEEEec
Q 009323 71 QEKILVAN-RGEIAVRVIRTAHEMGIPCVAVYS 102 (537)
Q Consensus 71 ~~kvLi~g-~g~~a~~ii~aa~~~G~~vv~v~~ 102 (537)
.|++||.| .+.++..+++.+.+.|++|++++.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999 578999999999999999998864
Done!