BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009325
(537 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
Length = 668
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/510 (51%), Positives = 327/510 (64%), Gaps = 93/510 (18%)
Query: 72 QKLVFRPPTPPEQPTTPPFVAQRVASPRVPSQRITSPRVAS---------------PRVA 116
Q + +PP+P +P T R SPR S R PR+ + PR+
Sbjct: 208 QAISSKPPSPRAEPPT--LDTPRPPSPRAASLRADPPRLDAARPTTPRPPSPLADAPRLD 265
Query: 117 SPRPVS---------------PRAASPRAASPRAASPRIVQHRRE---RPEPTLRYRHAS 158
+PRP + PR +P+ SPR+ SPR VQ RRE RPEPTL +HAS
Sbjct: 266 APRPTTPKPPSPRSDPPRLDAPRPTTPKPPSPRSVSPRAVQ-RREIVYRPEPTLPVQHAS 324
Query: 159 ATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRR 218
ATKIQ A+RGYMAR+SFRALKGLVRLQGVVRG +VKRQT NAMKYMQ +VRVQSQIQSRR
Sbjct: 325 ATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSRR 384
Query: 219 IQMLENQARRQAQHKNDKEAESTLGKWTFGSEAGNHEDWDASLLTKEEMEARMQRKVEAI 278
I+MLENQA + E KW SEAGN ++WD S+LTKEE ++R QRK +AI
Sbjct: 385 IKMLENQA----------QVEKDEAKWA-ASEAGN-DNWDDSVLTKEERDSRSQRKTDAI 432
Query: 279 IKRERAMAYAYSHQLWKSTPKSAQTSLADIRSGGFPWWWNWLERQLPGAN-TPETS-AMK 336
IKRER+MAYAYS +LWK++PKS Q D RS FP WWNW++RQ P A+ P S +
Sbjct: 433 IKRERSMAYAYSRKLWKNSPKSTQ----DNRS--FPQWWNWVDRQNPLASPAPSYSQPQR 486
Query: 337 NFQLTPPRPNSEIKPSPRVQASTHKQHNFEFSN-MDTPTPKSAKSTILTATRPVRSPSSS 395
+F+LTP S + PSP Q+S KQH+ N DT TP+S++ST T +RP+ +
Sbjct: 487 DFRLTP----SRLCPSPLSQSS--KQHHIRLDNHFDTSTPRSSRSTFHTPSRPIHT---- 536
Query: 396 KIPQGSPSLSKYSRARVSGAASPFDVPLRDDDSLMSCPPFSVPNYMTPTVSAKAKVRPNS 455
S+YSR R+ G SPF +DDDSL SCPPF P+YM PTVSAKAKVRPNS
Sbjct: 537 -------GTSRYSRGRLRGQDSPF----KDDDSLTSCPPF--PSYMAPTVSAKAKVRPNS 583
Query: 456 NPKERFPGTPSSESQRRLSFPLTQGIGSFKWKKGSLLSTSKDSSSQR--------VLDKN 507
NPKER GTP SE +RR+S+P TQ +F+W KGSL+ + +SSS R VL+K+
Sbjct: 584 NPKERVMGTPVSE-KRRMSYPPTQ--DTFRWNKGSLVMS--NSSSHRGPGSPGGVVLEKH 638
Query: 508 QSLQSIGNLSVDSTVSMPATVGRKPFNRFV 537
++L+S+GNLS+ ST SM TVGRK FNRFV
Sbjct: 639 KTLKSVGNLSIGSTASMATTVGRKEFNRFV 668
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 120/173 (69%), Gaps = 16/173 (9%)
Query: 1 MGKKGSWFSAIKRVFTPHSKEKLANESDKKSTKEKKKKGLGKLRHGETNSFIPLFRGPSS 60
M KKGSWFSAIKRVFTPHSKEKLANE ++KS KEKKKKG GKLRHGETNSF+P+FR PSS
Sbjct: 1 MVKKGSWFSAIKRVFTPHSKEKLANEPERKSGKEKKKKGFGKLRHGETNSFLPIFREPSS 60
Query: 61 IEKILGEAEREQKLVFRPPTPPEQPTTPPF-------------VAQRVASPRVPSQRITS 107
IEKILGEAER+ LVFRPPT P++P P+ + R SPRV S R+ S
Sbjct: 61 IEKILGEAERDHNLVFRPPT-PDRPN--PYSASPPPRPASPRVASPRPTSPRVASPRVPS 117
Query: 108 PRVASPRVASPRPVSPRAASPRAASPRAASPRIVQHRRERPEPTLRYRHASAT 160
PR PR SP+P SPRA PR+ SP+ SPR R P+P R + +SA+
Sbjct: 118 PRAEVPRTLSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPFDRSKPSSAS 170
>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1
Length = 454
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 15/174 (8%)
Query: 156 HASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQ 215
A+A IQ+ +RG++ARR + ++G RL+ ++ G V+RQ +K MQ L RVQSQI+
Sbjct: 108 EAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIR 167
Query: 216 SRRIQML-ENQAR-RQAQHKNDKEAESTLGKWTFGSEAGNHEDWDASLLTKEEMEARMQR 273
SRRI+M ENQAR +Q K+ KE LG G GN W+ S +KE++EA M
Sbjct: 168 SRRIRMSEENQARHKQLLQKHAKE----LGGLKNG---GN---WNYSNQSKEQVEAGMLH 217
Query: 274 KVEAIIKRERAMAYAYSHQL-WKSTPKSAQTSLADIRSGGFPWWWNWLERQLPG 326
K EA ++RERA+AYA++HQ KS K+A D W W+WLER + G
Sbjct: 218 KYEATMRRERALAYAFTHQQNLKSFSKTANPMFMD--PSNPTWGWSWLERWMAG 269
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 155 RHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQI 214
R +AT +QAA+RGY+ARR+F ALKG++RLQ ++RG V+RQ + + +VR+Q+
Sbjct: 112 REIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFA 171
Query: 215 QSRRI 219
+ R I
Sbjct: 172 RGREI 176
>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
Length = 794
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 162 IQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSR 217
IQAA RG++ARR K +++LQ VRG V+ Q +++ +Q +V++Q+ +++R
Sbjct: 221 IQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRAR 276
>sp|Q6PIF6|MYO7B_HUMAN Unconventional myosin-VIIb OS=Homo sapiens GN=MYO7B PE=2 SV=2
Length = 2116
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 139 RIVQHRRERPEPTLRYRHASATKIQAAYRGYMARRSFR-ALKGLVRLQGVVRGQNVKRQT 197
++++ R R E LR R A+ T +QA +RGY RR+F+ L G RLQ + R Q + RQ
Sbjct: 772 KVLRGYRYRKE-FLRQRRAAVT-LQAWWRGYCNRRNFKLILVGFERLQAIARSQPLARQ- 828
Query: 198 TNAM--KYMQL-------LVRVQSQIQSRRIQMLENQARRQAQHKN 234
AM + +QL LVR Q Q + R + +++ AR A +N
Sbjct: 829 YQAMRQRTVQLQALCRGYLVRQQVQAKRRAVVVIQAHARGMAARRN 874
>sp|Q99MZ6|MYO7B_MOUSE Unconventional myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 SV=3
Length = 2113
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 139 RIVQHRRERPEPTLRYRHASATKIQAAYRGYMARRSFR-ALKGLVRLQGVVRGQNVKRQT 197
R+++ + R E LR R A+ T +QA +RGY R++F+ L G RLQ + R + RQ
Sbjct: 772 RVLRGHKYRKE-FLRQRRAAVT-LQAGWRGYSQRKNFKLILVGFERLQAIARSHLLMRQ- 828
Query: 198 TNAM--KYMQL-------LVRVQSQIQSRRIQMLENQARRQAQHKNDKEAEST 241
AM + +QL LVR Q Q + R + +++ AR K+ + +ST
Sbjct: 829 FQAMRQRIVQLQARCRGYLVRQQVQAKRRAVVIIQAHARGMVVRKSYWQQKST 881
>sp|Q8C170|MYO9A_MOUSE Unconventional myosin-IXa OS=Mus musculus GN=Myo9a PE=1 SV=2
Length = 2542
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 129 RAASPRAASPRIVQHRRERPEPTLRYRHASATKIQAAYRGYMARRSFRALKG-LVRLQGV 187
R RAA+ I Q RE R RH +AT IQ+ +RGY R+ ++ + ++ LQ +
Sbjct: 1094 RYLELRAAAVIIQQRWRE----LYRCRHKAATCIQSRWRGYRQRKKYKEQRNKIILLQSI 1149
Query: 188 VRGQNVKRQTTNAMKYMQL 206
RG RQ NA+K +L
Sbjct: 1150 YRGFRA-RQRCNALKEEKL 1167
>sp|P62285|ASPM_BOVIN Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Bos taurus GN=ASPM PE=2 SV=1
Length = 3371
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 158 SATKIQAAYRGYMARRSF-RALKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQS 216
S KIQ+ YR Y +RR F R K V+LQ +VR + ++Q Y+ L Q + +
Sbjct: 1590 SIVKIQSYYRAYASRRKFLRLKKATVKLQSIVRMKLARKQ------YLHLRAIAQQREEH 1643
Query: 217 RRIQMLENQA 226
RR ++ QA
Sbjct: 1644 RRASCIKLQA 1653
>sp|P62297|ASPM_SHEEP Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Ovis aries GN=ASPM PE=2 SV=1
Length = 3374
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 158 SATKIQAAYRGYMARRSF-RALKGLVRLQGVVRGQNVKRQ 196
+ KIQ+ YR Y +RR F R K V+LQ +VR + ++Q
Sbjct: 1593 AVVKIQSYYRAYASRRKFLRLKKATVKLQSIVRMKQARKQ 1632
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.126 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,162,295
Number of Sequences: 539616
Number of extensions: 8595922
Number of successful extensions: 39430
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 616
Number of HSP's that attempted gapping in prelim test: 34508
Number of HSP's gapped (non-prelim): 4378
length of query: 537
length of database: 191,569,459
effective HSP length: 122
effective length of query: 415
effective length of database: 125,736,307
effective search space: 52180567405
effective search space used: 52180567405
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)