Your job contains 1 sequence.
>009327
MSKLLFLHTPHFTPKKLHTKTFSAIVTQSLTPLHCKCRLLSFSLNTTTTRSNSHLLSQIH
YYHRSFSVRSFDDSSSETKIQEPQQQAVVNEDYESRGKSKDEDEYPSGEFEYEKFSAWKI
FTVKLRMLVAFPWERVRKGSVLTMKLRGQIADQLKSRFSSGLSLPQICENFVKAAYDPRI
VGIYLHIEPLSCGWGKVEEIRRHVVDFKKSGKFIIGYVPVCGEKEYYLACACEELYAPPS
AYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLDN
IYGNWLDKVSSTKGKRKEDIERFINDGVYKVERLKEEGFITNVLYDDEVISMLKERLGVQ
KDKNLPMVDYRKYSGVRRWTLGLTGGGDQIAVIRASGSISRVRSPLSLSSSGIIGEQLIE
KIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSESKPVIASMSDVAASGGYYMA
MAAGTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRPFR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009327
(537 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031526 - symbol:SPPA "signal peptide peptidas... 1723 1.9e-177 1
DICTYBASE|DDB_G0278333 - symbol:DDB_G0278333 "Protease 4"... 328 3.8e-27 1
UNIPROTKB|P95072 - symbol:sppA "Possible protease IV SppA... 186 5.2e-25 2
UNIPROTKB|Q9KQK4 - symbol:VC_1994 "Protease IV" species:2... 295 2.4e-23 1
TIGR_CMR|VC_1994 - symbol:VC_1994 "protease IV" species:6... 295 2.4e-23 1
TIGR_CMR|CPS_2585 - symbol:CPS_2585 "signal peptide pepti... 274 6.5e-21 1
TIGR_CMR|SO_2420 - symbol:SO_2420 "signal peptide peptida... 273 7.7e-21 1
UNIPROTKB|P08395 - symbol:sppA species:83333 "Escherichia... 264 8.2e-20 1
TIGR_CMR|GSU_0820 - symbol:GSU_0820 "signal peptide pepti... 186 7.0e-12 1
TIGR_CMR|APH_0272 - symbol:APH_0272 "signal peptide pepti... 173 1.7e-10 1
TIGR_CMR|ECH_0401 - symbol:ECH_0401 "signal peptide pepti... 167 7.2e-10 1
TIGR_CMR|SPO_3640 - symbol:SPO_3640 "peptidase, family S4... 145 2.4e-07 1
TIGR_CMR|GSU_1234 - symbol:GSU_1234 "signal peptide pepti... 141 7.7e-07 1
TIGR_CMR|NSE_0409 - symbol:NSE_0409 "signal peptide pepti... 134 5.5e-06 1
TIGR_CMR|CJE_0065 - symbol:CJE_0065 "signal peptide pepti... 123 8.7e-05 1
TIGR_CMR|CBU_1986 - symbol:CBU_1986 "peptidase, U7 family... 118 0.00035 1
>TAIR|locus:2031526 [details] [associations]
symbol:SPPA "signal peptide peptidase" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006465 "signal peptide processing" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009642 "response to light intensity" evidence=IEP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR002142 InterPro:IPR004634 InterPro:IPR004635
Pfam:PF01343 PIRSF:PIRSF001217 GO:GO:0016021 EMBL:CP002684
GO:GO:0006508 GO:GO:0009941 GO:GO:0004252 GO:GO:0006465
GO:GO:0009535 EMBL:AC016662 KO:K04773 TIGRFAMs:TIGR00706
IPI:IPI00538755 PIR:F96767 RefSeq:NP_565077.2 UniGene:At.20800
ProteinModelPortal:Q9C9C0 SMR:Q9C9C0 STRING:Q9C9C0 MEROPS:S49.004
PRIDE:Q9C9C0 EnsemblPlants:AT1G73990.1 GeneID:843737
KEGG:ath:AT1G73990 TAIR:At1g73990 InParanoid:Q9C9C0 OMA:FVKAAYD
PhylomeDB:Q9C9C0 ProtClustDB:CLSN2680801 Genevestigator:Q9C9C0
Uniprot:Q9C9C0
Length = 677
Score = 1723 (611.6 bits), Expect = 1.9e-177, P = 1.9e-177
Identities = 345/539 (64%), Positives = 406/539 (75%)
Query: 1 MSKLLFLHTPHFTPKKLHTKTFSAIVTQSLTPLHCKCRLLSFSLNTTTTRSNSHLLSQIH 60
M+KLL LH PH P+ FS+ ++SL R +N SH+ ++H
Sbjct: 1 MAKLLLLHAPHVIPR------FSSSSSRSLVSAAALYRR-PLLVNPQF----SHIGPRLH 49
Query: 61 --YYHXXXXXXXXXXXXXETKIQEPQQQAVVNEDYESRGKSKDEDEYPSGEFEYEKFSAW 118
Y ++++ +Q+ ++ D S GK KDED YP+GE EYE +AW
Sbjct: 50 SPYNRRFSARAFDDSPASSAEMEKEKQEQLL--DGVS-GK-KDED-YPTGEMEYENRNAW 104
Query: 119 KIFTVKLRMLVAFPWERVRKGSVLTMKLRGQIADQLKSRFSSGLSLPQICENFVKAAYDP 178
+IF VK RML A+PW+RVRKGSVLTM LRGQI+DQLKSRF+SGLSLPQ+ ENFVKAAYDP
Sbjct: 105 EIFVVKFRMLFAYPWQRVRKGSVLTMTLRGQISDQLKSRFNSGLSLPQLSENFVKAAYDP 164
Query: 179 RIVGIYLHIEPLSCGWGKVEEIRRHVVDFKKSGKFIIGYVPVCGEKEYYLACACEELYAP 238
RI G+YLHI+PLSCGWGKVEEIRRH+++FKKSGKFI+GY+ +CG KEYYL CAC EL+AP
Sbjct: 165 RIAGVYLHIDPLSCGWGKVEEIRRHILNFKKSGKFIVGYISICGLKEYYLGCACNELFAP 224
Query: 239 PSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALL 298
PSAY LYGLTVQASFLGGV EKVGIEPQVQRIGKYKSAGDQL+RK++SEEN EML+ LL
Sbjct: 225 PSAYSFLYGLTVQASFLGGVFEKVGIEPQVQRIGKYKSAGDQLSRKSISEENYEMLSVLL 284
Query: 299 DNIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERLKEEGFITNVLYDDEVISMLKERLG 358
DNIY NWLD VS GK++ED+E FIN GVY++E+LKE G I ++ YDDEVI+MLKERLG
Sbjct: 285 DNIYSNWLDGVSDATGKKREDVENFINQGVYEIEKLKEAGLIKDIRYDDEVITMLKERLG 344
Query: 359 VQKDKNLPMVDYRKYSGVRRWTLGLTGGGDQIAVIRASGXXXXXXXXXXXXXXXXXXEQL 418
V+KDK LP VDY+KYSGV++WTLGLTGG DQIA+IRA G EQL
Sbjct: 345 VEKDKKLPTVDYKKYSGVKKWTLGLTGGRDQIAIIRAGGSISRVKGPLSTPGSAIIAEQL 404
Query: 419 IEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSESKPVIASMSDVXXXXXXX 478
IEKIR VRESK+YKAAIIRIDSPGGDALASDLMWREI+LL+E+KPVIASMSDV
Sbjct: 405 IEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIKLLAETKPVIASMSDVAASGGYY 464
Query: 479 XXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRPFR 537
I+AENLTLTGSIGVVT +F L KLYEKIGFNKE ISRGKYAE+L AE+RP +
Sbjct: 465 MAMAANAIVAENLTLTGSIGVVTARFTLAKLYEKIGFNKETISRGKYAELLGAEERPLK 523
>DICTYBASE|DDB_G0278333 [details] [associations]
symbol:DDB_G0278333 "Protease 4" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006465 "signal peptide processing"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002142 InterPro:IPR004634 Pfam:PF01343
PIRSF:PIRSF001217 dictyBase:DDB_G0278333 GO:GO:0016021
EMBL:AAFI02000023 GO:GO:0006508 GO:GO:0030587 GO:GO:0006465
GO:GO:0008233 eggNOG:COG0616 KO:K04773 OMA:WISSTAD
RefSeq:XP_642296.1 ProteinModelPortal:Q54YA6 STRING:Q54YA6
EnsemblProtists:DDB0205381 GeneID:8621503 KEGG:ddi:DDB_G0278333
InParanoid:Q54YA6 ProtClustDB:CLSZ2729114 Uniprot:Q54YA6
Length = 649
Score = 328 (120.5 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 94/362 (25%), Positives = 159/362 (43%)
Query: 162 LSLPQICENFVKAAYDPRIVGIYLHIEPLS-CGWGKVEEIRRHVVDFKKSGKFIIGYVP- 219
+S + + KAA D R++G+ + + + ++E R + FK GK + +
Sbjct: 88 ISFRSLLDAIEKAANDKRVIGLIVRLSGENQFSLANIQEFRNAISFFKSKGKRTVAFTDS 147
Query: 220 VC----GEKEYYLACACEELYAPPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYK 275
C G YY+A ++Y PS +L +F+ LEK+ I P +YK
Sbjct: 148 FCEAGSGIGRYYMASIFHDVYMAPSGTLNLINTQYDFAFIKKTLEKLNIVPDTITRKEYK 207
Query: 276 SAGDQLTRKTMSEENCEMLTALLDNIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERLK 335
+A L + ++E E + A+ ++Y ++ ++ + KE + G + ++
Sbjct: 208 NALSGLVNEHLTEPEKESMNAIFKSLYEQIIEDIAKDRSLTKERVNELFESGPFSSDKAL 267
Query: 336 EEGFITNVLYDDEVISMLKERLGVQKDKNLPMVDYRKYSGVRRWTLGLTGGGDQ---IAV 392
+ + LY DEV + E+L K KN ++ KY+ + G G Q IA+
Sbjct: 268 VNKLVDSTLYGDEVYTTTYEKLETTK-KNSNLLYAHKYNAKTKPLYGKKFGRSQQGVIAL 326
Query: 393 IRASGXXXXXXXXXXXXXX-XXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLM 451
I A G + L+ IR K KA +IR++S GG +ASD++
Sbjct: 327 INAEGTIHQGTSANKYNGGPSIGSDSLVLAIRSATLDKDVKAIVIRVNSGGGSYIASDMV 386
Query: 452 WREIRLLSES-KPVIASMSDVXXXXXXXXXXXXXTILAENLTLTGSIGVVTGKFNLGKLY 510
EI ++ K ++ SM I+A TLTGSIGV+T KFNL ++
Sbjct: 387 HHEIEASKKAGKKIVISMGTYCASGGYFFACNADKIVALGATLTGSIGVLTAKFNLKGMW 446
Query: 511 EK 512
E+
Sbjct: 447 EE 448
>UNIPROTKB|P95072 [details] [associations]
symbol:sppA "Possible protease IV SppA (Endopeptidase IV)
(Signal peptide peptidase)" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR002142
InterPro:IPR004634 InterPro:IPR004635 Pfam:PF01343
PIRSF:PIRSF001217 GO:GO:0016021 GO:GO:0005886 GO:GO:0005618
GenomeReviews:AL123456_GR GO:GO:0006508 EMBL:BX842574 GO:GO:0006465
GO:GO:0008233 KO:K04773 OMA:WISSTAD TIGRFAMs:TIGR00705
TIGRFAMs:TIGR00706 EMBL:AL123456 PIR:G70644 RefSeq:NP_215238.1
RefSeq:YP_006514068.1 ProteinModelPortal:P95072 SMR:P95072
PRIDE:P95072 EnsemblBacteria:EBMYCT00000003227 GeneID:13318613
GeneID:888535 KEGG:mtu:Rv0724 KEGG:mtv:RVBD_0724 PATRIC:18150118
TubercuList:Rv0724 HOGENOM:HOG000043718 ProtClustDB:CLSK790694
Uniprot:P95072
Length = 623
Score = 186 (70.5 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 173 KAAYDPRIVGIYLHIEPLSCGWGKVEEIRRHVVDFKKSGKFIIGYVPVCGEKEYYLACAC 232
+AA DPR+ G+ ++ G V+E+R + F + G YYLA A
Sbjct: 96 RAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTLSYYLASAF 155
Query: 233 EELYAPPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCE 292
E++ PS L G A+FL L K GIE Q G+YKSA + T ++ + E
Sbjct: 156 GEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTEDGFTDAHRE 215
Query: 293 MLTALLDNIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERLKEEGFITNVLYDDEVISM 352
+T +LD++ V+ ++ + ++ + + G I + + D+ +
Sbjct: 216 AVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLIDRIGFRDQAYAR 275
Query: 353 LKERLGVQK 361
+ E +GV+K
Sbjct: 276 MAELVGVEK 284
Score = 178 (67.7 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 422 IRKVRESKRYKAAIIRIDSPGGDALASDLMWREI-RLLSESKPVIASMSDVXXXXXXXXX 480
+R+V A ++R+DSPGG AS+ +WRE+ R KPV+ASM V
Sbjct: 367 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 426
Query: 481 XXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRPF 536
I+A T+TGSIGV+TGK + L +++G + + A+ + + PF
Sbjct: 427 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDA-PF 481
Score = 40 (19.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 418 LIEKIRKVRESKRYKAAIIRIDSPGGDALAS---DLMWREIRLLSESKPVIASMSD 470
L++++ +R + R + +D + S +W +R S+P AS+ D
Sbjct: 534 LVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPGSSLWDMVRPRPSSRPAAASLPD 589
>UNIPROTKB|Q9KQK4 [details] [associations]
symbol:VC_1994 "Protease IV" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR002142 InterPro:IPR004634 InterPro:IPR004635
Pfam:PF01343 PIRSF:PIRSF001217 GO:GO:0016021 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006508 GO:GO:0006465 GO:GO:0008233
KO:K04773 OMA:WISSTAD TIGRFAMs:TIGR00705 TIGRFAMs:TIGR00706
PIR:H82130 RefSeq:NP_231628.1 ProteinModelPortal:Q9KQK4 SMR:Q9KQK4
DNASU:2613498 GeneID:2613498 KEGG:vch:VC1994 PATRIC:20083022
ProtClustDB:CLSK874630 Uniprot:Q9KQK4
Length = 616
Score = 295 (108.9 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 106/409 (25%), Positives = 177/409 (43%)
Query: 132 PWERVRKGSVLTMKLRGQIADQ------LKSRFSS--GLSLPQ------ICENFVKAAYD 177
P + K S L + L G I +Q + S S G LP+ I E A D
Sbjct: 48 PLPTMDKSSALVLNLSGPIVEQSTHINPMDSFTGSVFGEELPRENVLFDIVETLRHAKND 107
Query: 178 PRIVGIYLHIEPL-SCGWGKVEEIRRHVVDFKKSGKFIIGYVPVCGEKEYYLACACEELY 236
+ G+ L + + K+ I + + +FK SGK + + +YYLA +++Y
Sbjct: 108 NNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQSQYYLASYADKIY 167
Query: 237 APPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTA 296
P L G + + + +LEK+ + V R+G YKSA + R MS+ E +
Sbjct: 168 LAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVRDDMSDAARESASR 227
Query: 297 LLDNIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERL--------KEEGFITNVLYDDE 348
L ++ ++D V++ + + + + V +++ + K+ G + + +
Sbjct: 228 WLTQLWSAYVDDVAANRQIEIKTLTPSMEQFVAQLKEVNGDLAALSKKVGLVDELATRQQ 287
Query: 349 VISMLKERLGVQKDKNLPMVDYRKYSGVRRWTLGLTGGGDQIAVIRASGXXXXXXXXXXX 408
V L E G + + Y +Y + T LT D IAV+ ASG
Sbjct: 288 VRQTLAETFGSDGKDSYNAIGYYEYKTTIKPTT-LTDAND-IAVVVASGAIMDGSQPRGT 345
Query: 409 XXXXXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSES-KPVIAS 467
+ + +R+ R KA ++R+DSPGG A AS+++ EI L + KPV+ S
Sbjct: 346 VGG----DTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVS 401
Query: 468 MSDVXXXXXXXXXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFN 516
MS + I+A+ TLTGSIG+ F++ +EK G N
Sbjct: 402 MSSLAASGGYWISMSADKIVAQPTTLTGSIGI----FSVITTFEK-GLN 445
>TIGR_CMR|VC_1994 [details] [associations]
symbol:VC_1994 "protease IV" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=ISS] InterPro:IPR002142
InterPro:IPR004634 InterPro:IPR004635 Pfam:PF01343
PIRSF:PIRSF001217 GO:GO:0016021 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006508 GO:GO:0006465 GO:GO:0008233
KO:K04773 OMA:WISSTAD TIGRFAMs:TIGR00705 TIGRFAMs:TIGR00706
PIR:H82130 RefSeq:NP_231628.1 ProteinModelPortal:Q9KQK4 SMR:Q9KQK4
DNASU:2613498 GeneID:2613498 KEGG:vch:VC1994 PATRIC:20083022
ProtClustDB:CLSK874630 Uniprot:Q9KQK4
Length = 616
Score = 295 (108.9 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 106/409 (25%), Positives = 177/409 (43%)
Query: 132 PWERVRKGSVLTMKLRGQIADQ------LKSRFSS--GLSLPQ------ICENFVKAAYD 177
P + K S L + L G I +Q + S S G LP+ I E A D
Sbjct: 48 PLPTMDKSSALVLNLSGPIVEQSTHINPMDSFTGSVFGEELPRENVLFDIVETLRHAKND 107
Query: 178 PRIVGIYLHIEPL-SCGWGKVEEIRRHVVDFKKSGKFIIGYVPVCGEKEYYLACACEELY 236
+ G+ L + + K+ I + + +FK SGK + + +YYLA +++Y
Sbjct: 108 NNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQSQYYLASYADKIY 167
Query: 237 APPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTA 296
P L G + + + +LEK+ + V R+G YKSA + R MS+ E +
Sbjct: 168 LAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVRDDMSDAARESASR 227
Query: 297 LLDNIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERL--------KEEGFITNVLYDDE 348
L ++ ++D V++ + + + + V +++ + K+ G + + +
Sbjct: 228 WLTQLWSAYVDDVAANRQIEIKTLTPSMEQFVAQLKEVNGDLAALSKKVGLVDELATRQQ 287
Query: 349 VISMLKERLGVQKDKNLPMVDYRKYSGVRRWTLGLTGGGDQIAVIRASGXXXXXXXXXXX 408
V L E G + + Y +Y + T LT D IAV+ ASG
Sbjct: 288 VRQTLAETFGSDGKDSYNAIGYYEYKTTIKPTT-LTDAND-IAVVVASGAIMDGSQPRGT 345
Query: 409 XXXXXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSES-KPVIAS 467
+ + +R+ R KA ++R+DSPGG A AS+++ EI L + KPV+ S
Sbjct: 346 VGG----DTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVS 401
Query: 468 MSDVXXXXXXXXXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFN 516
MS + I+A+ TLTGSIG+ F++ +EK G N
Sbjct: 402 MSSLAASGGYWISMSADKIVAQPTTLTGSIGI----FSVITTFEK-GLN 445
>TIGR_CMR|CPS_2585 [details] [associations]
symbol:CPS_2585 "signal peptide peptidase SppA, 67K type"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR002142 InterPro:IPR004634
InterPro:IPR004635 Pfam:PF01343 PIRSF:PIRSF001217 GO:GO:0016021
GO:GO:0006508 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006465
GO:GO:0008233 eggNOG:COG0616 KO:K04773 OMA:WISSTAD
TIGRFAMs:TIGR00705 TIGRFAMs:TIGR00706 RefSeq:YP_269300.1
ProteinModelPortal:Q481G9 STRING:Q481G9 GeneID:3518571
KEGG:cps:CPS_2585 PATRIC:21468233 HOGENOM:HOG000281969
ProtClustDB:CLSK757249 BioCyc:CPSY167879:GI48-2648-MONOMER
Uniprot:Q481G9
Length = 637
Score = 274 (101.5 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 90/352 (25%), Positives = 157/352 (44%)
Query: 164 LPQICENFVKAAYDPRIVGIYLHIEPLS-CGWGKVEEIRRHVVDFKKSGKFIIGYVPVCG 222
L I + KA D R+ + L ++ L+ G K+++I + DFK SGK II
Sbjct: 95 LTDIIDVISKAKKDDRVEILVLQLQGLNRAGLTKLQDIAAALEDFKSSGKQIIALGDQFS 154
Query: 223 EKEYYLACACEELYAPPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLT 282
+ +YYLA +++ P + L G + LEK+ I + R+G +KSA +
Sbjct: 155 QDQYYLASTANDIWLNPQGFMLLDGYGRYNMYFKSALEKLAINQHIFRVGTFKSAVEPFI 214
Query: 283 RKTMSEENCEMLTALLDNIYGNWLDKVSSTKGKRKEDIERFINDGVYK--------VERL 334
R MS+ + L +++ + + V++ +G ++ + I++ V K +
Sbjct: 215 RDDMSDAAKKANKLWLADLWMQYKEDVAARRGFGVDNFDENIDNLVAKFSAADSSFAQYA 274
Query: 335 KEEGFITNVLYDDEVISMLKERLGV-QKDKNLPMVDYRKY-----SGVRRWTLGLTGGGD 388
+ ++ + E+ S L E +G +K + + Y+ Y S + D
Sbjct: 275 LKNNWVDQLKSRQEMRSELIELVGENKKGDSYNHIGYKNYIAATSSSIEESAELAEKSHD 334
Query: 389 QIAVIRASGXXXXXXXXXXXXXXXXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALAS 448
++A+I A G + L RK R + KA ++R+DSPGG A AS
Sbjct: 335 KVAIIVAKGTILDGTQKPGTIGGDSTAKLL----RKARNNDDVKAVVLRVDSPGGSAYAS 390
Query: 449 DLMWREIRLLSES-KPVIASMSDVXXXXXXXXXXXXXTILAENLTLTGSIGV 499
+++ +E+ LL ++ KPV+ASM I A T+TGSIG+
Sbjct: 391 EIIRQEVELLKKAGKPVVASMGTYAASGGYWISAPADKIYAAPSTITGSIGI 442
>TIGR_CMR|SO_2420 [details] [associations]
symbol:SO_2420 "signal peptide peptidase SppA, 67K type"
species:211586 "Shewanella oneidensis MR-1" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] InterPro:IPR002142 InterPro:IPR004634
InterPro:IPR004635 Pfam:PF01343 PIRSF:PIRSF001217 GO:GO:0016021
GO:GO:0006508 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006465
GO:GO:0008233 KO:K04773 OMA:WISSTAD TIGRFAMs:TIGR00705
TIGRFAMs:TIGR00706 HOGENOM:HOG000281969 RefSeq:NP_718010.1
ProteinModelPortal:Q8EEG2 GeneID:1170135 KEGG:son:SO_2420
PATRIC:23524457 ProtClustDB:CLSK906723 Uniprot:Q8EEG2
Length = 614
Score = 273 (101.2 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 109/420 (25%), Positives = 178/420 (42%)
Query: 135 RVRKGSVLTMKLRGQIADQ----------LK---SRFSSG-LSLPQICENFVKAAYDPRI 180
+V S L + L G I DQ LK + S G + L I A +D RI
Sbjct: 49 KVEDNSALVLNLAGSIVDQKQQVDPIEAALKQGNNGSSDGEILLADIIYVIDNATHDNRI 108
Query: 181 VGIYLHIEPLS-CGWGKVEEIRRHVVDFKKSGKFIIGYVPVCGEKEYYLACACEELYAPP 239
I L + L G K++ I + FK+SGK ++ + +Y+LA +Y P
Sbjct: 109 STIVLDLAELKRAGISKLQSIGDALNRFKESGKKVVAIGNYYEQNQYFLASFATTIYLNP 168
Query: 240 SAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLD 299
SL GL++ + LEK+ I+ + R+G +KSA + R MS+ E +ALL
Sbjct: 169 QGSVSLDGLSMYNQYFKSALEKLKIKAHIFRVGTFKSAVEPYMRDDMSDAAREASSALLA 228
Query: 300 NIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERL-KEEG----------FITNVLYDDE 348
+I+ ++ V+ R+ D + D + +L K EG ++ + D+E
Sbjct: 229 DIWQSYTQTVAKN---RQIDANALVLDSPSYLAQLDKAEGDSATMALNMKWVDTLATDEE 285
Query: 349 VISMLKERLGVQKD-KNLPMVDYRKYSGVRRWTLGLTGGGDQIAVIRASGXXXXXXXXXX 407
++ + +G + + + V + Y + L D + +I ASG
Sbjct: 286 FRKIMLDAVGKENNGDSFKQVSFYDYLTLVT-PLPSFIEQDSVGIIVASGTILNGSQPAG 344
Query: 408 XXXXXXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSES-KPVIA 466
+ L RK R K KA ++R+DSPGG A AS+ + +E+ L + KPV+
Sbjct: 345 QIGGDSTADLL----RKARFDKHIKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVV 400
Query: 467 SMSDVXXXXXXXXXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYA 526
SM + I A TLTGSIG+ +G + + +S ++A
Sbjct: 401 SMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDSLASLGIHTDGVSTSEWA 460
>UNIPROTKB|P08395 [details] [associations]
symbol:sppA species:83333 "Escherichia coli K-12"
[GO:0006465 "signal peptide processing" evidence=IEA;IMP]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0008236 "serine-type
peptidase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR002142 InterPro:IPR004634 InterPro:IPR004635
Pfam:PF01343 PIRSF:PIRSF001217 GO:GO:0005887 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006508 GO:GO:0008236 GO:GO:0004175 GO:GO:0006465
eggNOG:COG0616 EMBL:M13359 EMBL:U13772 EMBL:U13773 EMBL:U13774
EMBL:U13775 EMBL:U13776 EMBL:U13777 EMBL:U13778 EMBL:U13779
EMBL:U13780 EMBL:U13782 EMBL:U13833 EMBL:U13834 PIR:F64936
PIR:I81191 RefSeq:NP_416280.1 RefSeq:YP_490027.1 PDB:3BEZ PDB:3BF0
PDBsum:3BEZ PDBsum:3BF0 ProteinModelPortal:P08395 SMR:P08395
IntAct:P08395 MEROPS:S49.001 PRIDE:P08395
EnsemblBacteria:EBESCT00000000010 EnsemblBacteria:EBESCT00000018069
GeneID:12930146 GeneID:946281 KEGG:ecj:Y75_p1741 KEGG:eco:b1766
PATRIC:32118843 EchoBASE:EB0961 EcoGene:EG10968 KO:K04773
OMA:WISSTAD ProtClustDB:PRK10949 BioCyc:EcoCyc:EG10968-MONOMER
BioCyc:ECOL316407:JW1755-MONOMER BioCyc:MetaCyc:EG10968-MONOMER
EvolutionaryTrace:P08395 Genevestigator:P08395 TIGRFAMs:TIGR00705
TIGRFAMs:TIGR00706 Uniprot:P08395
Length = 618
Score = 264 (98.0 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 100/407 (24%), Positives = 174/407 (42%)
Query: 140 SVLTMKLRGQIADQLKSRFSSGLSLPQICENFVKAAYDPRIVGIYLHIEPLSCG-WGKVE 198
S L+ +L G +D+L+ SL I +A D I GI + ++ + G ++
Sbjct: 78 SKLSRQLLGASSDRLQEN-----SLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQ 132
Query: 199 EIRRHVVDFKKSGKFIIGYVPVCGEKEYYLACACEELYAPPSAYFSLYGLTVQASFLGGV 258
I + + +F+ SGK + + +YYLA +++ P L+G + +
Sbjct: 133 YIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSL 192
Query: 259 LEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLDNIYGNWLDKVSSTKGKRKE 318
L+K+ + V R+G YKSA + R MS E + + ++ N+L+ V++ + E
Sbjct: 193 LDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAE 252
Query: 319 DI---ERFINDGVYKVERLKEEGFITNVLYDD-----EVISMLKERLGVQK-DKNLPMVD 369
+ + + +G+ K + + N L D E+ L + G K DKN +
Sbjct: 253 QVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAIS 312
Query: 370 YRKYSGVRRWTLGLTGGGDQIAVIRASGXXXXXXXXXXXXXXXXXXEQLIEKIRKVRESK 429
Y Y+ ++ T TG D I V+ A+G Q IR R
Sbjct: 313 YYDYA-LK--TPADTG--DSIGVVFANGAIMDGEETQGNVGGDTTAAQ----IRDARLDP 363
Query: 430 RYKAAIIRIDSPGGDALASDLMWREIRLL-SESKPVIASMSDVXXXXXXXXXXXXXTILA 488
+ KA ++R++SPGG AS+++ E+ + KPV+ SM + I+A
Sbjct: 364 KVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVA 423
Query: 489 ENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRP 535
TLTGSIG+ + + IG + + +S A+V P
Sbjct: 424 NPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALP 470
>TIGR_CMR|GSU_0820 [details] [associations]
symbol:GSU_0820 "signal peptide peptidase SppA, 36K type"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006465 "signal
peptide processing" evidence=ISS] InterPro:IPR002142
InterPro:IPR004635 Pfam:PF01343 GO:GO:0006508 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008233 KO:K04773
TIGRFAMs:TIGR00706 HOGENOM:HOG000022573 RefSeq:NP_951877.1
ProteinModelPortal:Q74EY9 MEROPS:S49.007 GeneID:2687229
KEGG:gsu:GSU0820 PATRIC:22024403 OMA:MERTEVI ProtClustDB:CLSK828042
BioCyc:GSUL243231:GH27-785-MONOMER Uniprot:Q74EY9
Length = 321
Score = 186 (70.5 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 61/239 (25%), Positives = 110/239 (46%)
Query: 141 VLTMKLRGQIADQLKSR--FSSGL--SLPQICENFVKAAYDPRIVGIYLHIEPLSCGWGK 196
+L + + G I DQ K S G ++ + E +KA DP++ G+ L I G
Sbjct: 47 ILIVDISGAIGDQAKGGGLLSRGTPSTVSLVREVLLKAERDPKVAGLILRINSPG-GTVT 105
Query: 197 VEEIRRH-VVDFKKSGKFIIG--YVPVCGEKEYYLACACEELYAPPSAYFSLYGLTVQAS 253
+I RH ++ FK+ + + + YY+A A + + A P+A G+ +
Sbjct: 106 ASDIIRHDLLAFKERRNLPVSACIMGIGASGGYYVATAADGITAHPTALTGSIGVLLMTF 165
Query: 254 FLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLDNIYGNWLDKVSSTK 313
+ G+L KVG+E + + G K R T EE ++ ++D +G ++D V +
Sbjct: 166 NVEGLLGKVGVEEKTIKSGGKKDLLSPFRRATPEEER--LVQGVIDQFHGRFVDVVQARP 223
Query: 314 GKR--KEDIERFINDGVYKVERLKEEGFITNVLYDDEVISMLKERLGVQKDKNLPMVDY 370
G R + D+ + ++ G I + Y D+VI+ L++R+G D + +V Y
Sbjct: 224 GNRLSRHDLLTLADGRIFSAADALAAGLIDRIGYLDDVIASLRDRIG---DPDARVVTY 279
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 420 EKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSESK--PVIASMSDVXXXXXX 477
E + K + I+RI+SPGG ASD++ ++ E + PV A + +
Sbjct: 79 EVLLKAERDPKVAGLILRINSPGGTVTASDIIRHDLLAFKERRNLPVSACIMGIGASGGY 138
Query: 478 XXXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRPFR 537
I A LTGSIGV+ FN+ L K+G ++ I G ++L+ PFR
Sbjct: 139 YVATAADGITAHPTALTGSIGVLLMTFNVEGLLGKVGVEEKTIKSGGKKDLLS----PFR 194
>TIGR_CMR|APH_0272 [details] [associations]
symbol:APH_0272 "signal peptide peptidase SppA, 36K type"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006465 "signal
peptide processing" evidence=ISS] InterPro:IPR002142
InterPro:IPR004635 Pfam:PF01343 GO:GO:0006508 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0008233 eggNOG:COG0616 KO:K04773
TIGRFAMs:TIGR00706 OMA:AEPSPFH HOGENOM:HOG000022573
ProtClustDB:CLSK749382 RefSeq:YP_504886.1 ProteinModelPortal:Q2GL65
STRING:Q2GL65 GeneID:3931322 KEGG:aph:APH_0272 PATRIC:20949118
BioCyc:APHA212042:GHPM-304-MONOMER Uniprot:Q2GL65
Length = 298
Score = 173 (66.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 34/99 (34%), Positives = 57/99 (57%)
Query: 422 IRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSESKPVIASMSDVXXXXXXXXXX 481
+ +V + KA ++RIDSPGG S+ ++R+IR ++E KPV+A M +V
Sbjct: 73 LSRVEDDSSIKAVVLRIDSPGGTVGDSEELYRQIRAIAEKKPVVAVMGNVAASGGYMTAL 132
Query: 482 XXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEII 520
++A N T+TGSIGV+T + ++ E++G + I
Sbjct: 133 AADHVIANNGTITGSIGVLTQYVGVARIAERLGITLKTI 171
>TIGR_CMR|ECH_0401 [details] [associations]
symbol:ECH_0401 "signal peptide peptidase SppA"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006465
"signal peptide processing" evidence=ISS] InterPro:IPR002142
InterPro:IPR004635 Pfam:PF01343 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006508 GO:GO:0008233
eggNOG:COG0616 KO:K04773 TIGRFAMs:TIGR00706 RefSeq:YP_507221.1
ProteinModelPortal:Q2GH62 STRING:Q2GH62 GeneID:3927845
KEGG:ech:ECH_0401 PATRIC:20576279 HOGENOM:HOG000022573 OMA:YASIWAD
ProtClustDB:CLSK749382 BioCyc:ECHA205920:GJNR-402-MONOMER
Uniprot:Q2GH62
Length = 288
Score = 167 (63.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 416 EQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSESKPVIASMSDVXXXX 475
E++ ++K+ E I+ I+SPGG S+++++ IR +S++KPV+A ++D
Sbjct: 63 EEMDALLKKIAEDNHVTGLILNINSPGGSVTGSEILYQNIRNVSKNKPVVALLNDFAASG 122
Query: 476 XXXXXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRP 535
I+A + T+TGSIGV+ + L EK+G + + I L AE P
Sbjct: 123 GYMTAIAADYIIARHTTITGSIGVLMQYIGINPLAEKMGISLKSIKSSN----LKAETSP 178
Query: 536 F 536
F
Sbjct: 179 F 179
>TIGR_CMR|SPO_3640 [details] [associations]
symbol:SPO_3640 "peptidase, family S49" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=ISS] InterPro:IPR002142
Pfam:PF01343 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006508
GO:GO:0008233 KO:K04774 RefSeq:YP_168834.1
ProteinModelPortal:Q5LMC4 GeneID:3195166 KEGG:sil:SPO3640
PATRIC:23380761 HOGENOM:HOG000022572 OMA:LDPFRPE
ProtClustDB:CLSK934239 Uniprot:Q5LMC4
Length = 281
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 53/172 (30%), Positives = 85/172 (49%)
Query: 226 YYLACACEELYAPPSAYFSLYGLTVQASFLGGV-LEKVGIEPQVQRIGKYKSAGDQLTRK 284
Y+LACA +E++A S+ G+ + ASF V L + G E +V GK KS D + +
Sbjct: 113 YWLACAADEIWADDSSVLGSIGV-ISASFGAHVFLARQGFERRVHTAGKSKSMLDPFSPE 171
Query: 285 TMSEENCEMLTALLDNIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERLKEEGFITNVL 344
+E+ L LL +I+ N++ V +G R + E V+ R ++ G I +
Sbjct: 172 --KKEDVTRLKGLLGDIHQNFISHVKERRGDRLDATEDLFTGEVWLGARARDLGLIDGIA 229
Query: 345 YDDEVISMLKERLGVQKDKNLPMVDYRKYSGVRR--WT-LGLTGGGDQIAVI 393
+ + ++ER G DK V +R+Y GVRR W+ G+ D +A I
Sbjct: 230 H---LKPKMQERFG---DK----VRFRRY-GVRRPFWSRFGVHLAEDALAGI 270
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 40/142 (28%), Positives = 62/142 (43%)
Query: 390 IAVIRASGXXXXXXXXXXXXXXXXXXEQLIEKIRKVRESKRYKAAIIRIDSPGGDALASD 449
+AV+R SG ++E R R+ K A + I+SPGG + S
Sbjct: 30 VAVVRLSGAIGLAGRGALNDTTLA---PMLE--RAFRKGKP-AAVALEINSPGGSPVQSS 83
Query: 450 LMWREIR-LLSESK-PVIASMSDVXXXXXXXXXXXXXTILAENLTLTGSIGVVTGKFNLG 507
L+ IR L +E K PV A + DV I A++ ++ GSIGV++ F
Sbjct: 84 LIGARIRRLAAEHKVPVYAFVEDVAASGGYWLACAADEIWADDSSVLGSIGVISASFGAH 143
Query: 508 KLYEKIGFNKEIISRGKYAEVL 529
+ GF + + + GK +L
Sbjct: 144 VFLARQGFERRVHTAGKSKSML 165
>TIGR_CMR|GSU_1234 [details] [associations]
symbol:GSU_1234 "signal peptide peptidase SppA, 36K type"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006465 "signal
peptide processing" evidence=ISS] InterPro:IPR002142
InterPro:IPR004635 Pfam:PF01343 GO:GO:0006508 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008233 KO:K04773
TIGRFAMs:TIGR00706 HOGENOM:HOG000022573 RefSeq:NP_952287.2
GeneID:2686661 KEGG:gsu:GSU1234 PATRIC:22025237
ProtClustDB:CLSK828257 BioCyc:GSUL243231:GH27-1246-MONOMER
Uniprot:Q74DT1
Length = 293
Score = 141 (54.7 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 416 EQLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSESKPVIASMSDVXXXX 475
++ ++++ +R+ KA ++R++SPGG S ++ ++ L+ +K V+ SM V
Sbjct: 56 QETVKQLDDLRKKSSVKAVVLRVESPGGVIGPSQEIYAAVKRLAATKKVVVSMGSVAASG 115
Query: 476 XXXXXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAE 527
I A T+TGSIGV+ N+ L +K+G + GK+ +
Sbjct: 116 GYHVAVPAAVIYANPGTITGSIGVLMKLSNIEGLMDKVGLKAFTLKSGKFKD 167
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 36/154 (23%), Positives = 74/154 (48%)
Query: 180 IVGIYLHIEPLSCGWGKVEEIRRHVVDFKKSGKFIIGYVPVCGEKEYYLACACEELYAPP 239
+ + L +E G +EI V + K ++ V Y++A +YA P
Sbjct: 71 VKAVVLRVESPGGVIGPSQEIYAAVKRLAATKKVVVSMGSVAASGGYHVAVPAAVIYANP 130
Query: 240 SAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLD 299
G+ ++ S + G+++KVG++ + GK+K +G + RK ++EE +L ++D
Sbjct: 131 GTITGSIGVLMKLSNIEGLMDKVGLKAFTLKSGKFKDSGSPV-RK-LTEEERAVLQGVID 188
Query: 300 NIYGNWLDKVSSTKGKRKEDIERFINDGVYKVER 333
N++ ++ V+ + E++ R + VY E+
Sbjct: 189 NLHDQFVRAVAEGRQLPVEEVRRLADGRVYTGEQ 222
>TIGR_CMR|NSE_0409 [details] [associations]
symbol:NSE_0409 "signal peptide peptidase SppA, 36K type"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006465
"signal peptide processing" evidence=ISS] InterPro:IPR002142
InterPro:IPR004635 Pfam:PF01343 GO:GO:0006508 GO:GO:0008233
EMBL:CP000237 GenomeReviews:CP000237_GR eggNOG:COG0616 KO:K04773
TIGRFAMs:TIGR00706 RefSeq:YP_506296.1 STRING:Q2GE00 GeneID:3931385
KEGG:nse:NSE_0409 PATRIC:22680875 HOGENOM:HOG000127294 OMA:AEPSPFH
ProtClustDB:CLSK2527924 BioCyc:NSEN222891:GHFU-432-MONOMER
Uniprot:Q2GE00
Length = 308
Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 26/98 (26%), Positives = 53/98 (54%)
Query: 427 ESKRYKAAIIRIDSPGGDALASDLMWREIRLLSESKPVIASMSDVXXXXXXXXXXXXXTI 486
++ + KA I+ +DS GG A AS+ ++ +R +S+ KPV+ + + I
Sbjct: 77 DNPKIKAIILHVDSGGGGAAASEALYNVVRSVSQVKPVVIVANGIMASGAYMVAMAAEHI 136
Query: 487 LAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGK 524
+A N ++ GSIG++ N ++ +K+G +++ G+
Sbjct: 137 VAYNTSIVGSIGMILQAPNFYEIGKKVGVKMDVVRSGR 174
>TIGR_CMR|CJE_0065 [details] [associations]
symbol:CJE_0065 "signal peptide peptidase SppA, 36K type"
species:195099 "Campylobacter jejuni RM1221" [GO:0006465 "signal
peptide processing" evidence=ISS] InterPro:IPR002142
InterPro:IPR004635 Pfam:PF01343 GO:GO:0006508 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0008233 eggNOG:COG0616 KO:K04773
TIGRFAMs:TIGR00706 HOGENOM:HOG000022573 RefSeq:YP_178090.1
ProteinModelPortal:Q5HX95 STRING:Q5HX95 GeneID:3230828
KEGG:cjr:CJE0065 PATRIC:20041835 OMA:IASSKHT ProtClustDB:CLSK872554
BioCyc:CJEJ195099:GJC0-69-MONOMER Uniprot:Q5HX95
Length = 298
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 38/174 (21%), Positives = 70/174 (40%)
Query: 167 ICENFVKAAYDPRIVGIYLHIEPLSCGWGKVEEIRRHVVDFKKSGKFIIGYVPVCGEKEY 226
+ E + A D I G+ I+ + E+ + D K ++ Y
Sbjct: 63 VLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSY 122
Query: 227 YLACACEELYAPPSAYFSLYGLTVQASFLGGVLEKVGIEPQVQRIGKYKSAGDQLTRKTM 286
++ A P+++ G+ +Q + L G+ K+GI+ Q + G++KSAG
Sbjct: 123 LAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNE 182
Query: 287 SEENCEMLTALLDNIYGNWLDKVSSTKGKRKEDIERFINDGVYKVERLKEEGFI 340
+E N L L+D Y + V + +++ N V+ + KE G I
Sbjct: 183 NERN--FLQGLIDQSYDLFTGFVVKERALDLNKKDQWANARVFLAAKAKELGLI 234
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 31/108 (28%), Positives = 46/108 (42%)
Query: 418 LIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSESKPVIASMSDVXXXXXX 477
++EKI + K + IDSPGG S + I+ L KPV+ S
Sbjct: 63 VLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSY 122
Query: 478 XXXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKY 525
ILA + GSIGV+ +L L K+G ++ I G++
Sbjct: 123 LAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEF 170
>TIGR_CMR|CBU_1986 [details] [associations]
symbol:CBU_1986 "peptidase, U7 family" species:227377
"Coxiella burnetii RSA 493" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=ISS] InterPro:IPR002142
Pfam:PF01343 GO:GO:0006508 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0008233 KO:K04773 RefSeq:NP_820961.1
ProteinModelPortal:Q83AB8 PRIDE:Q83AB8 GeneID:1209899
KEGG:cbu:CBU_1986 PATRIC:17932713 HOGENOM:HOG000022574 OMA:TNASAEN
ProtClustDB:CLSK915172 BioCyc:CBUR227377:GJ7S-1959-MONOMER
Uniprot:Q83AB8
Length = 313
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 417 QLIEKIRKVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLSES--KPVIASMSDVXXX 474
+++ ++RK K K ++ I+SPGG + + ++ +I L + K V+ D
Sbjct: 80 RVVPELRKAFADKNSKGVVLLINSPGGSPVQASIIRDKIIELKKQYHKKVVVVGEDELAS 139
Query: 475 XXXXXXXXXXTILAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAEVL 529
I N TLTGSIGV+ G F +K+G + + G + + L
Sbjct: 140 GAYLVSTGADKIYVNNDTLTGSIGVIMGGFGFVDTLKKVGVTRRLFVAGDHKDRL 194
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 537 493 0.00083 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 620 (66 KB)
Total size of DFA: 284 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.75u 0.12s 39.87t Elapsed: 00:00:01
Total cpu time: 39.75u 0.12s 39.87t Elapsed: 00:00:01
Start: Mon May 20 21:00:10 2013 End: Mon May 20 21:00:11 2013