Your job contains 1 sequence.
>009328
MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE
NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIIS
LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE
PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL
AQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLF
QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT
SSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSC
LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE
GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAEK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009328
(537 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 904 3.0e-142 2
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 780 4.5e-119 3
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 792 5.7e-117 3
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 741 8.0e-110 2
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 676 6.4e-106 3
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 729 3.2e-104 2
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 643 1.7e-101 3
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 636 7.1e-101 3
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 625 1.2e-100 3
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 637 2.4e-100 3
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 531 4.2e-78 3
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 334 1.7e-77 3
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 525 5.7e-73 3
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 544 4.8e-72 3
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 545 4.5e-69 2
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 536 1.1e-68 2
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 508 3.7e-52 2
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 251 4.3e-41 3
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 250 3.2e-40 3
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 218 3.0e-25 3
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 214 9.4e-17 1
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 163 3.2e-11 1
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 157 1.4e-10 1
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 153 3.8e-10 1
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 151 6.3e-10 1
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 147 1.7e-09 1
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 139 1.2e-08 1
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 136 2.6e-08 1
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 137 6.2e-08 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 146 9.0e-08 1
UNIPROTKB|Q652A1 - symbol:IAA26 "Auxin-responsive protein... 127 2.5e-07 1
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 142 3.2e-07 1
TAIR|locus:2094578 - symbol:IAA2 "indole-3-acetic acid in... 126 9.5e-07 1
UNIPROTKB|Q6Z5M0 - symbol:IAA8 "Auxin-responsive protein ... 132 1.9e-06 1
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 128 4.4e-06 1
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 126 5.7e-06 1
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 127 2.1e-05 1
UNIPROTKB|Q6H543 - symbol:IAA7 "Auxin-responsive protein ... 100 4.5e-05 3
TAIR|locus:2195820 - symbol:IAA18 "indole-3-acetic acid i... 106 5.3e-05 2
TAIR|locus:2139890 - symbol:IAA11 "indole-3-acetic acid i... 85 5.3e-05 2
TAIR|locus:2088324 - symbol:PAP1 "phytochrome-associated ... 105 5.6e-05 2
TAIR|locus:2011461 - symbol:IAA6 "indole-3-acetic acid 6"... 117 8.8e-05 1
TAIR|locus:2129910 - symbol:IAA1 "indole-3-acetic acid in... 113 0.00011 1
TAIR|locus:2034200 - symbol:IAA15 "indole-3-acetic acid i... 114 0.00015 1
UNIPROTKB|Q75GK1 - symbol:IAA12 "Auxin-responsive protein... 118 0.00015 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 111 0.00028 2
TAIR|locus:2196184 - symbol:IAA34 "indole-3-acetic acid i... 112 0.00034 1
UNIPROTKB|Q8LQ74 - symbol:IAA6 "Auxin-responsive protein ... 95 0.00040 2
TAIR|locus:2038701 - symbol:IAA32 "indole-3-acetic acid i... 111 0.00052 1
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 111 0.00057 1
TAIR|locus:2018374 - symbol:AXR3 "AT1G04250" species:3702... 90 0.00072 3
UNIPROTKB|Q5NB25 - symbol:IAA3 "Auxin-responsive protein ... 113 0.00086 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 115 0.00091 1
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 904 (323.3 bits), Expect = 3.0e-142, Sum P(2) = 3.0e-142
Identities = 177/287 (61%), Positives = 205/287 (71%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE
Sbjct: 147 MTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 206
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQFIIS 120
NGEL VGVR MHLGVLATA HA T+TMF+VYYKPRTSQFIIS
Sbjct: 207 NGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTSQFIIS 266
Query: 121 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE 180
LNKYLEA++NKF+VGMR+KMRFEGEDSPERR+SGTV+GV+D SPHWKDSKWR L+V WDE
Sbjct: 267 LNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDE 326
Query: 181 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVXXXXXXXXXXXXXXXXX 240
PASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV
Sbjct: 327 PASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSVL 384
Query: 241 XQSHNLTQLSVTAE---DKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 284
Q H Q +T++ ++ K SD+ +NS +S D
Sbjct: 385 TQPHEFAQSCITSQWSSPQQCHRDANEDAKKSDWLNNSYSVSNVAKD 431
Score = 508 (183.9 bits), Expect = 3.0e-142, Sum P(2) = 3.0e-142
Identities = 116/243 (47%), Positives = 160/243 (65%)
Query: 297 QQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIE 354
QQ ++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI+
Sbjct: 403 QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGID 459
Query: 355 LINHATSSAPSEKV-PVSSLTTEGHIISTISAAADSDGKSDIAXXXXXXXXXXXXXSPKE 413
L++ ++ + P EK P+ + IS + + SD KS+I+ SPKE
Sbjct: 460 LMS-SSLAVPEEKTAPMRPIN-----ISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKE 513
Query: 414 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 473
QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +R +WE
Sbjct: 514 VQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWE 571
Query: 474 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 533
IV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E L ++
Sbjct: 572 IVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVETTLTTTS 631
Query: 534 SAE 536
+
Sbjct: 632 KTD 634
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 780 (279.6 bits), Expect = 4.5e-119, Sum P(3) = 4.5e-119
Identities = 147/221 (66%), Positives = 174/221 (78%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGE
Sbjct: 159 MTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGE 218
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQFIIS 120
NG+L VGVR LAR MHLGVLATASHAV T T+FVV+YKPR SQFI+
Sbjct: 219 NGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQFIVG 278
Query: 121 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE 180
+NKY+EA+ + F++G R++MRFEGE+SPER F+GT+VG D S W SKWRSL+VQWDE
Sbjct: 279 VNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSLQVQWDE 338
Query: 181 PASITRPDRVSPWEIEPFVASA---TPNLVQPVLAKNKRPR 218
P ++ RPD+VSPWEIEPF+A++ TP Q +K KR R
Sbjct: 339 PTTVQRPDKVSPWEIEPFLATSPISTP--AQQPQSKCKRSR 377
Score = 373 (136.4 bits), Expect = 4.5e-119, Sum P(3) = 4.5e-119
Identities = 73/114 (64%), Positives = 89/114 (78%)
Query: 414 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 473
S S+Q ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+GQL R KW
Sbjct: 478 SMSEQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDKWI 537
Query: 474 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 527
+V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+ S+E E+
Sbjct: 538 VVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISS-SLENEE 590
Score = 54 (24.1 bits), Expect = 4.5e-119, Sum P(3) = 4.5e-119
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 344 TGTSCRLFGIELINHATSSAPSEKVPVSS 372
T S RLFG +L +++ + P +K P+ +
Sbjct: 436 TNCSYRLFGFDLTSNSPAPIPQDKQPMDT 464
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 792 (283.9 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 152/224 (67%), Positives = 175/224 (78%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M Q TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE
Sbjct: 176 MTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGE 235
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQFIIS 120
G+L VGVR LA+ M LGVLATASHAV T T+FVV+YKPR SQFIIS
Sbjct: 236 TGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIIS 295
Query: 121 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE 180
+NKY+ A+ N F++GMRY+MRFEGE+SPER F+GT++G D S W SKWRSL++QWDE
Sbjct: 296 VNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDE 355
Query: 181 PASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 223
P+SI RP++VSPWEIEPF SA TP Q +K+KR R E+
Sbjct: 356 PSSIQRPNKVSPWEIEPFSPSALTPTPTQQQ-SKSKRSRPISEI 398
Score = 343 (125.8 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 74/124 (59%), Positives = 88/124 (70%)
Query: 410 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 469
SPKE Q +Q TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G+L +
Sbjct: 500 SPKE-QKQQ---TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPK 555
Query: 470 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDIL 529
KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L +G +
Sbjct: 556 DKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL---GDKGTIVN 612
Query: 530 LSSD 533
L SD
Sbjct: 613 LESD 616
Score = 52 (23.4 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 346 TSCRLFGIELINH-ATSSAPSEKVPVS 371
+SCRLFG +L + A+++ P +K +S
Sbjct: 454 SSCRLFGFDLTSKPASATIPHDKQLIS 480
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 741 (265.9 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 140/221 (63%), Positives = 170/221 (76%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGE
Sbjct: 155 MSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGE 214
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTS--QFI 118
N EL VGVR R MH+GVLATA+HA+ T T+F V+YKPRTS +FI
Sbjct: 215 NEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFI 274
Query: 119 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHWKDSKWRSLKVQ 177
+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W DS+WRSLKVQ
Sbjct: 275 VSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQ 334
Query: 178 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 218
WDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR
Sbjct: 335 WDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR 375
Score = 364 (133.2 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 90/214 (42%), Positives = 122/214 (57%)
Query: 313 WPAHSGHSTPH-PSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA------TSSAPS 365
WP ++ + S NN++ T +K G CRLFG EL+ + ++++ S
Sbjct: 435 WPTNADSAAESFASAFNNES------TEKKQTNGNVCRLFGFELVENVNVDECFSAASVS 488
Query: 366 EKVPVSSLTTEGHIISTISAAADSDGKSDIAXXXXXXXXXXXXXSPKESQSKQSCLTSNR 425
V V S + + +SDI SP+ESQS+Q R
Sbjct: 489 GAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI-----R 542
Query: 426 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMM 484
S TKV MQG AVGRA+DLT Y+ L +LEEMFDIKG+L TK W++VYTDDE DMM
Sbjct: 543 SCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMM 602
Query: 485 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 518
+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 603 MVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 636
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 676 (243.0 bits), Expect = 6.4e-106, Sum P(3) = 6.4e-106
Identities = 127/223 (56%), Positives = 160/223 (71%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M+Q PTQEL+A DLHG +WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE
Sbjct: 155 MSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGE 214
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQFIIS 120
GEL VG+R M GV+A+A HA Q MF+V YKPR+SQFI+S
Sbjct: 215 TGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQCMFIVVYKPRSSQFIVS 274
Query: 121 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE 180
+K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WR+L+VQWDE
Sbjct: 275 YDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHWKCSEWRNLEVQWDE 334
Query: 181 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 223
AS +RP++VSPWEIE + + N+ +P L KNKR R E+
Sbjct: 335 FASFSRPNKVSPWEIEHLMPAL--NVPRPSLLKNKRLREVNEI 375
Score = 317 (116.6 bits), Expect = 6.4e-106, Sum P(3) = 6.4e-106
Identities = 62/94 (65%), Positives = 73/94 (77%)
Query: 410 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 469
SP E QSKQ +S R+ TKVQMQGV + RA+DL+ L GYD LI ELEE+FD+KGQL TR
Sbjct: 496 SPTEIQSKQ--FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTR 553
Query: 470 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 503
+WEI +TD + D MLVGDDPW EFCNMVK+I I
Sbjct: 554 NQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 587
Score = 89 (36.4 bits), Expect = 6.4e-106, Sum P(3) = 6.4e-106
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 322 PHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV--PVSSLTTEG 377
P P N+ ++ Q+E T+TGT+ RLFG+ L+ + P E++ +S LT EG
Sbjct: 429 PMPKLNYNNQMVTQIEENITTKTGTNFRLFGVSLVTPSVIKDPIEEIGSEISKLT-EG 485
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 729 (261.7 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 137/222 (61%), Positives = 170/222 (76%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGE
Sbjct: 195 MSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE 254
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTS--QFI 118
NGEL VGVR R MHLGVLATA HA++T TMF VYYKPRTS +FI
Sbjct: 255 NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFI 314
Query: 119 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 177
+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+ P W SKWRSLKV+
Sbjct: 315 VPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVR 374
Query: 178 WDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 218
WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 375 WDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 323 (118.8 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 92/256 (35%), Positives = 136/256 (53%)
Query: 267 KHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSK 326
K+S++ N +S + G W PR + ++E + N A T P
Sbjct: 590 KYSEYPV-LNGLSTENAGGNWPIRPR---ALNYYEEVV----NAQAQAQAREQVTKQPF- 640
Query: 327 PNNDTLLEQVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIST-I 383
T+ E ET + E G +CRLFGI L N+ T S S++ ++ I S +
Sbjct: 641 ----TIQE--ETAKSRE-G-NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKV 692
Query: 384 SAAAD-SDG-KSDIAXXXXXXXXXXXXXSPKESQSKQSCLTSNRSRTKVQMQGVAVGRAL 441
+D S G KS PK++Q+K + S+RS TKV QG+A+GR++
Sbjct: 693 QDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSV 749
Query: 442 DLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKR 500
DL+ Y+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++
Sbjct: 750 DLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRK 809
Query: 501 IFICSSQDVKKMSPGS 516
IFI + ++V+KM+PG+
Sbjct: 810 IFIYTKEEVRKMNPGT 825
Score = 323 (118.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 83/235 (35%), Positives = 117/235 (49%)
Query: 115 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRS 173
S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+ P W SKWRS
Sbjct: 311 SEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRS 370
Query: 174 LKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR------------LSM 221
LKV+WDE +SI RPDRVSPW++EP A A P L + + KRPR L+
Sbjct: 371 LKVRWDETSSIPRPDRVSPWKVEP--ALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTR 428
Query: 222 EVXXXXXXXXXXXXXXXXXXQSHNLTQLSVT-AEDKRID---NHVAWHHKHSDFSSNSNF 277
E Q + L E D N V W D +
Sbjct: 429 EGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQSSADDDKVDVVS 488
Query: 278 MSRTQSDGEWLTSPRVKFSQQLFQEAIDD-NKNISAWPAHSGHSTP---HPSKPN 328
SR W++S R + + + + NI P+H G P H S P+
Sbjct: 489 GSRRYGSENWMSSAR---HEPTYTDLLSGFGTNID--PSH-GQRIPFYDHSSSPS 537
Score = 39 (18.8 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 314 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 347
PA S P P +P ++ ++ T GT+
Sbjct: 399 PALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTT 432
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 643 (231.4 bits), Expect = 1.7e-101, Sum P(3) = 1.7e-101
Identities = 121/218 (55%), Positives = 155/218 (71%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+TSK+LV GD VF+RGE
Sbjct: 157 MSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGE 216
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQFIIS 120
GEL VG+R M GV+A+A HA Q +F+V YKPR+SQFI+S
Sbjct: 217 TGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFIVVYKPRSSQFIVS 276
Query: 121 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE 180
+K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WRSL+VQWDE
Sbjct: 277 YDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHWKCSEWRSLEVQWDE 336
Query: 181 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 218
AS +RP++VSPWEIE V + N+ + L KNKR R
Sbjct: 337 FASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKNKRLR 372
Score = 329 (120.9 bits), Expect = 1.7e-101, Sum P(3) = 1.7e-101
Identities = 65/109 (59%), Positives = 81/109 (74%)
Query: 410 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 469
SP E QSKQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR
Sbjct: 498 SPIEIQSKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTR 555
Query: 470 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 518
+W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK + L
Sbjct: 556 NQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSL 604
Score = 68 (29.0 bits), Expect = 1.7e-101, Sum P(3) = 1.7e-101
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 322 PHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV--PVSSLT 374
P P N+ ++ Q+E T+ GT+ RLFG+ L P +++ +S LT
Sbjct: 431 PMPKLNYNNQMVTQIEENITTKAGTNFRLFGVTLDTPPMIKDPIKQIGSDISKLT 485
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 636 (228.9 bits), Expect = 7.1e-101, Sum P(3) = 7.1e-101
Identities = 120/223 (53%), Positives = 153/223 (68%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M+Q PTQE++A DLHG +WRF+HI+RG +RHLLT GW+ F TSK+LV GD VF+RGE
Sbjct: 157 MSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGE 216
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQFIIS 120
GEL VG+R M G++A+A HA Q MF+V YKPR+SQFI+S
Sbjct: 217 TGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRSSQFIVS 276
Query: 121 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE 180
+K+L+ VNNKF VG R+ MRFEG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE
Sbjct: 277 YDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSPHWKCSEWRSLEVQWDE 336
Query: 181 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 223
AS RP++VSPW+IE + N+ + KNKR R E+
Sbjct: 337 FASFPRPNQVSPWDIEHLTPWS--NVSRSSFLKNKRSREVNEI 377
Score = 334 (122.6 bits), Expect = 7.1e-101, Sum P(3) = 7.1e-101
Identities = 65/109 (59%), Positives = 82/109 (75%)
Query: 410 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 469
SP E QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQL R
Sbjct: 497 SPTEIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQAR 554
Query: 470 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 518
+WEI +T++E D MLVG+DPW EFCNMVK+IFI S ++VK + L
Sbjct: 555 NQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSL 603
Score = 64 (27.6 bits), Expect = 7.1e-101, Sum P(3) = 7.1e-101
Identities = 34/136 (25%), Positives = 56/136 (41%)
Query: 258 IDNHVAWHH-KHSDFSSN--SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA-- 312
I++ W + S F N S ++ S L P + Q++ Q+++ NIS
Sbjct: 351 IEHLTPWSNVSRSSFLKNKRSREVNEIGSSSSHLLPPTLTQGQEIGQQSMATPMNISLRY 410
Query: 313 --------WPAHSGHSTP-HP-SKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSS 362
P+ S P P +K N + ++ +E T S RLFG+ L +
Sbjct: 411 RDITEDAMTPSRLLMSYPVQPMAKLNYNNVVTPIEENITTNAVASFRLFGVSLATPSVIK 470
Query: 363 APSEKV--PVSSLTTE 376
P E++ +S LT E
Sbjct: 471 DPVEQIGLEISRLTQE 486
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 625 (225.1 bits), Expect = 1.2e-100, Sum P(3) = 1.2e-100
Identities = 121/223 (54%), Positives = 151/223 (67%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M+Q P QEL+A DLHG +WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE
Sbjct: 157 MSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGE 216
Query: 61 NGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQFIIS 120
GEL VG+R M GV+A+A HA Q MF V YKPR+S+FI+S
Sbjct: 217 TGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRSSKFIVS 276
Query: 121 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE 180
+K+L+AVNNKF VG R+ MR EG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE
Sbjct: 277 YDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSPHWKCSEWRSLEVQWDE 336
Query: 181 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 223
S P +VSPW+IE + + N+ + L KNKR R E+
Sbjct: 337 FTSFPGPKKVSPWDIEHLMPAI--NVPRSFLLKNKRLREVNEI 377
Score = 326 (119.8 bits), Expect = 1.2e-100, Sum P(3) = 1.2e-100
Identities = 63/94 (67%), Positives = 76/94 (80%)
Query: 410 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 469
SP E Q+KQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR
Sbjct: 498 SPTEIQNKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTR 555
Query: 470 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 503
+WEI +TD + D MLVGDDPW EFCNMVK+IFI
Sbjct: 556 NQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
Score = 81 (33.6 bits), Expect = 1.2e-100, Sum P(3) = 1.2e-100
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 301 QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT 360
++A++ +K + ++P P P N+ ++ ++E T+TGT+ RLFG+ L
Sbjct: 415 EDAMNPSKLLMSYPVQ-----PMPKLNYNNQMVTEMEENITTKTGTNFRLFGVTLDTPPV 469
Query: 361 SSAPSEKV--PVSSLTTEG 377
P E++ +S LT EG
Sbjct: 470 IKDPIEEIGSEISKLT-EG 487
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 637 (229.3 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 120/215 (55%), Positives = 155/215 (72%)
Query: 6 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 65
P QEL+AKDLHG +WRF+H +RG P+RH LTTGW+ F TSK+LV GD VF+RGE GEL
Sbjct: 158 PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELR 217
Query: 66 VGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKP--RTSQFIISLNK 123
VG+R M GV+A+A HA+ Q +F+V YKP R+SQFI+S +K
Sbjct: 218 VGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDK 277
Query: 124 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 183
+L+A+NNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WRSL+VQWDE AS
Sbjct: 278 FLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVNDFSPHWKCSEWRSLEVQWDEFAS 337
Query: 184 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 218
+RP++VSPWEIE +++ N+ + L KNKR R
Sbjct: 338 FSRPNKVSPWEIEHLMSAL--NVPRSSLLKNKRLR 370
Score = 323 (118.8 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 64/109 (58%), Positives = 79/109 (72%)
Query: 410 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 469
SP E QSKQ S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQL TR
Sbjct: 482 SPIEIQSKQ--FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTR 539
Query: 470 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 518
+W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK + L
Sbjct: 540 NQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSL 588
Score = 69 (29.3 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 301 QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT 360
++A++ ++ + ++P P P N+ ++ Q+E T+ T+ RLFG+ L
Sbjct: 399 EDAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENITTKAVTNFRLFGVSLAIPLV 453
Query: 361 SSAPSEKV--PVSSLTTEG 377
P E++ +S LT EG
Sbjct: 454 IKDPIEEIGSDISKLT-EG 471
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 531 (192.0 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 104/218 (47%), Positives = 142/218 (65%)
Query: 3 QSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENG 62
Q P+QEL+AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLR E G
Sbjct: 210 QQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGG 269
Query: 63 ELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTS--QFIIS 120
EL +G+R AR +L+ ++AV+T++MF V+Y PR + +F+I
Sbjct: 270 ELRLGIRRAARPRNGLPDSIIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIP 328
Query: 121 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWD 179
KY+ ++ + +G R++MRFE +DSPERR +G V GV D P+ W +SKWR L V+WD
Sbjct: 329 YEKYITSIRSPVCIGTRFRMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWD 388
Query: 180 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 217
E +RVSPWEI+P V+ P+L + KRP
Sbjct: 389 ESFVSDHQERVSPWEIDPSVS--LPHLSIQSSPRPKRP 424
Score = 258 (95.9 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 50/108 (46%), Positives = 73/108 (67%)
Query: 411 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 470
P E+ + + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 651 PVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPE 710
Query: 471 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 517
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 711 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 758
Score = 37 (18.1 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 330 DTLLEQVETGRKTETGTSCRLFGIELINHATSSAP 364
D + +Q + + C+LFG L +S P
Sbjct: 625 DMMGKQKGSELNMNASSGCKLFGFSLPVETPASKP 659
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 334 (122.6 bits), Expect = 1.7e-77, Sum P(3) = 1.7e-77
Identities = 66/120 (55%), Positives = 86/120 (71%)
Query: 414 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 473
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 422 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 481
Query: 474 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 533
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K F E + L SSD
Sbjct: 482 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF--FQPESK-ALTSSD 538
Score = 292 (107.8 bits), Expect = 1.7e-77, Sum P(3) = 1.7e-77
Identities = 60/119 (50%), Positives = 73/119 (61%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTFVTSKRLVAGDTFVFLR 58
M+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F T+KRL+ GD FV LR
Sbjct: 155 MSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLR 214
Query: 59 GENGELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQF 117
GENGEL G+R M GV+A+ +A T+ MF V YKPR QF
Sbjct: 215 GENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKPRM-QF 272
Score = 243 (90.6 bits), Expect = 1.7e-77, Sum P(3) = 1.7e-77
Identities = 44/84 (52%), Positives = 61/84 (72%)
Query: 132 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 191
F V + +M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VS
Sbjct: 262 FNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS 321
Query: 192 PWEIEPFVASATPNLVQPVLAKNK 215
PW+IE + S+ ++ Q L K K
Sbjct: 322 PWDIEHLIPSS--DISQSSLKKKK 343
Score = 83 (34.3 bits), Expect = 1.9e-49, Sum P(3) = 1.9e-49
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 288 LTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGT 346
+ SP + + + AI+D+K +S HS + P+ + N+D +++ + TE T
Sbjct: 369 MNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATT 426
Query: 347 SCRLFGIELIN-HATSSAPSEKVPVSSLTTEGHIISTISAAAD 388
SC LFG++L H A S V ++++ +I + D
Sbjct: 427 SCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFD 469
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 525 (189.9 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 101/217 (46%), Positives = 139/217 (64%)
Query: 6 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 65
P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L
Sbjct: 162 PAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLM 221
Query: 66 VGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNK 123
+G+R R MH+G+LA A+HA A + F +++ PR S +F++ L K
Sbjct: 222 LGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAK 281
Query: 124 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 182
Y +A+ + ++GMR++M FE ED RR+ GTV G+ D P WK S+WR+L+V WDE
Sbjct: 282 YNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDEST 341
Query: 183 SITRPDRVSPWEIEPFVASATPNLV-QPVLAKNKRPR 218
+ RP RVS WEIEP + TP + P + K PR
Sbjct: 342 AGDRPSRVSIWEIEPVI---TPFYICPPPFFRPKYPR 375
Score = 228 (85.3 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 47/91 (51%), Positives = 64/91 (70%)
Query: 425 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 482
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 483 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 513
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1047
Score = 45 (20.9 bits), Expect = 5.7e-73, Sum P(3) = 5.7e-73
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 270 DFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEA 303
D S +NF+SR Q G+ + V S +F+ A
Sbjct: 760 DNVSPTNFLSRNQQQGQ---AASVSASDSVFERA 790
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 544 (196.6 bits), Expect = 4.8e-72, Sum P(3) = 4.8e-72
Identities = 102/195 (52%), Positives = 134/195 (68%)
Query: 6 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 65
PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L
Sbjct: 194 PTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLM 253
Query: 66 VGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNK 123
VGVR R MH+GVLA A+HA A +T F+++Y PR ++F+I L K
Sbjct: 254 VGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAK 313
Query: 124 YLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 181
Y +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP
Sbjct: 314 YRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEP 373
Query: 182 ASITRPDRVSPWEIE 196
+P RVSPW+IE
Sbjct: 374 GCNDKPTRVSPWDIE 388
Score = 196 (74.1 bits), Expect = 4.8e-72, Sum P(3) = 4.8e-72
Identities = 44/97 (45%), Positives = 64/97 (65%)
Query: 425 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 482
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 483 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP-GSKL 518
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
Score = 39 (18.8 bits), Expect = 4.8e-72, Sum P(3) = 4.8e-72
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 309 NISAWPAHSGHSTPHPSKPNNDTL 332
N S + S P+KP N TL
Sbjct: 514 NTSGQEQNLSQSMSAPAKPENSTL 537
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 545 (196.9 bits), Expect = 4.5e-69, Sum P(2) = 4.5e-69
Identities = 107/217 (49%), Positives = 145/217 (66%)
Query: 6 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 65
P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+R E +L
Sbjct: 162 PAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLF 221
Query: 66 VGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNK 123
+G+R R MH+G+LA A+HA AT + F V++ PR SQ F+I L+K
Sbjct: 222 LGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSK 281
Query: 124 YLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEP 181
Y++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE
Sbjct: 282 YIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDES 341
Query: 182 ASITRPDRVSPWEIEPFVASAT-PNLVQPVLAKNKRP 217
+ R RVS WEIEP P+L P+ + KRP
Sbjct: 342 TAGERQPRVSLWEIEPLTTFPMYPSLF-PL--RLKRP 375
Score = 180 (68.4 bits), Expect = 4.5e-69, Sum P(2) = 4.5e-69
Identities = 40/95 (42%), Positives = 60/95 (63%)
Query: 422 TSNRSRT--KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYT 477
+SN+++ KV G +VGR+LD++ Y L +EL +MF I+G L R+ W++V+
Sbjct: 700 SSNQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFV 758
Query: 478 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 512
D E D++L+GDDPW F N V I I S +DV +M
Sbjct: 759 DKENDILLLGDDPWESFVNNVWYIKILSPEDVHQM 793
Score = 44 (20.5 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 356 INHATSSAPSEKVPVSSLTTEGHIISTISAAA 387
I HAT P VP S L+++ I ++AAA
Sbjct: 224 IRHATR--PQTIVPSSVLSSDSMHIGLLAAAA 253
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 536 (193.7 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 105/220 (47%), Positives = 143/220 (65%)
Query: 2 NQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEN 61
+Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +
Sbjct: 161 SQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDK 220
Query: 62 GELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTS--QFII 119
+L +G+R R MHLG+LA A+HA AT + F ++Y PR S +F+I
Sbjct: 221 NQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVI 280
Query: 120 SLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 177
L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV
Sbjct: 281 PLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVG 340
Query: 178 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 217
WDE + R RVS WEIEP + P P + KRP
Sbjct: 341 WDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 194 (73.4 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 79/270 (29%), Positives = 122/270 (45%)
Query: 261 HVAWHHKHSDFSSNSNFMSRTQS---DGEWLTS-PRVKFSQQLFQEAIDDNKNISAWPAH 316
H + D SS ++RT S W + P V S FQ + N N +
Sbjct: 623 HTLLSNFSQDESSQLLHLTRTNSAMTSSGWPSKRPAVDSS---FQHSGAGNNNTQSVLEQ 679
Query: 317 SGHSTPHPSK-PNNDTLLEQVETGRKT---ETGT-----SCRLFGIELINHATSSAPSEK 367
G S H S P N L GR+ + G+ S LFG+ I+ ++ P+
Sbjct: 680 LGQS--HTSNVPPNAVSLPPFPGGRECSIEQEGSASDPHSHLLFGVN-IDSSSLLMPNGM 736
Query: 368 VPVSSLTTEGHIISTISAAADSDGKSDIAXXXXXXXXXXXXXSPKESQSKQSCLTSN-RS 426
+ S+ EG +T+ + S+ +D + QS ++ + N +S
Sbjct: 737 SNLRSIGIEGGDSTTLPFTS-SNFNNDFSGNLAMTTPSSCIDESGFLQSSENLGSENPQS 795
Query: 427 RT--KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 482
T KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 796 NTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDREND 854
Query: 483 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 512
++L+GDDPW EF + V I I S Q+V++M
Sbjct: 855 VLLLGDDPWPEFVSSVWCIKILSPQEVQQM 884
Score = 51 (23.0 bits), Expect = 3.1e-56, Sum P(3) = 3.1e-56
Identities = 26/110 (23%), Positives = 42/110 (38%)
Query: 208 QPVLAKNKRPRLSMEVXXXXXXXXXXXXXXXXXXQSHNLTQLSVTAEDKRIDNHVAWHHK 267
Q L++ ++ +LS + QS + LS + + +DNH
Sbjct: 518 QQQLSQQQQQQLSQQQQQQAYLGVPETHQPQSQAQSQSNNHLS-QQQQQVVDNHNPSASS 576
Query: 268 HSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS 317
+ S+ S F S +Q + L S QQ F + N IS P H+
Sbjct: 577 AAVVSAMSQFGSASQPNTSPLQSMTSLCHQQSFSDTNGGNNPIS--PLHT 624
Score = 44 (20.5 bits), Expect = 3.1e-56, Sum P(3) = 3.1e-56
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 352 GIELINHATSSAPSEKVP 369
G+EL+N A SS +K+P
Sbjct: 888 GLELLNSAPSSNNVDKLP 905
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 508 (183.9 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 99/221 (44%), Positives = 137/221 (61%)
Query: 2 NQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEN 61
+Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++
Sbjct: 191 SQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDD 250
Query: 62 GELHVGVRCLARXXXXXXXXXXXXXXMHLGVLATASHAVATQTMFVVYYKPRTS--QFII 119
G+L +GVR ++ M+ + +HA++T ++F + Y P+ S FII
Sbjct: 251 GKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFII 310
Query: 120 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQW 178
K+L+ V+ F +GMR+K R E ED+ ERR G + G+ D P W SKWR L V+W
Sbjct: 311 PAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRW 370
Query: 179 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 219
D+ + RVSPWEIEP + + N V KR R+
Sbjct: 371 DDIVANGHQQRVSPWEIEP--SGSISNSGSFVTTGPKRSRI 409
Score = 50 (22.7 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 348 CRLFGIELINHATSSAPSEKVP 369
CRLFG L + T+ A + VP
Sbjct: 550 CRLFGFPLTDETTAVASATAVP 571
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 251 (93.4 bits), Expect = 4.3e-41, Sum P(3) = 4.3e-41
Identities = 42/64 (65%), Positives = 54/64 (84%)
Query: 6 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 65
P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L
Sbjct: 151 PVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLC 210
Query: 66 VGVR 69
VG+R
Sbjct: 211 VGIR 214
Score = 184 (69.8 bits), Expect = 4.3e-41, Sum P(3) = 4.3e-41
Identities = 48/132 (36%), Positives = 65/132 (49%)
Query: 92 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 149
V + A Q VVYY PR S +F + A+ ++ GMR+KM FE EDS
Sbjct: 274 VAEAVARAACGQAFEVVYY-PRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSR 332
Query: 150 RR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 207
F GTV V+ P W +S WR L+V WDEP + RVSPW +E + S P +
Sbjct: 333 ISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPTIH 390
Query: 208 QPVLAKNKRPRL 219
+ K+ R+
Sbjct: 391 LSPFSPRKKIRI 402
Score = 119 (46.9 bits), Expect = 4.3e-41, Sum P(3) = 4.3e-41
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 488
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGVIKRIGD 641
Query: 489 DPWHEFCNMVKRIFI 503
+P+ +F KR+ I
Sbjct: 642 EPFSDFMKATKRLTI 656
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 250 (93.1 bits), Expect = 3.2e-40, Sum P(3) = 3.2e-40
Identities = 43/68 (63%), Positives = 54/68 (79%)
Query: 2 NQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEN 61
N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV K+LVAGD+ VF+R EN
Sbjct: 152 NAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAEN 211
Query: 62 GELHVGVR 69
G+L VG+R
Sbjct: 212 GDLCVGIR 219
Score = 182 (69.1 bits), Expect = 3.2e-40, Sum P(3) = 3.2e-40
Identities = 49/132 (37%), Positives = 68/132 (51%)
Query: 92 VLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 149
V+ A+ A++ + VVYY PR TS+F + A+ + GMR+KM FE EDS
Sbjct: 276 VIEAATLAISGRPFEVVYY-PRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSR 334
Query: 150 RR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 207
F GTV V P W +S WR L+V WDEP + RV+PW +E V++ P +
Sbjct: 335 ISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVE-LVSNVHPIPL 393
Query: 208 QPVLAKNKRPRL 219
K+ RL
Sbjct: 394 TSFSPPRKKMRL 405
Score = 113 (44.8 bits), Expect = 3.2e-40, Sum P(3) = 3.2e-40
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 488
KV M+ VGR LDL+ L Y+ L +L +MF IK + ++Y D G + G+
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSVLYRDASGAIKYAGN 644
Query: 489 DPWHEFCNMVKRIFICSSQ 507
+P+ EF +R+ I + Q
Sbjct: 645 EPFSEFLKTARRLTILTEQ 663
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 218 (81.8 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 38/64 (59%), Positives = 48/64 (75%)
Query: 6 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 65
P Q+L D+HG W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+
Sbjct: 155 PVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMF 214
Query: 66 VGVR 69
+GVR
Sbjct: 215 IGVR 218
Score = 140 (54.3 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 107 VVYYKPRT-SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP 164
VV+Y S+F++ +++ + G R KM E EDS F G V +
Sbjct: 286 VVFYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETG 345
Query: 165 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 203
W+ S W+ L++ WDEP + RV+PW++E A AT
Sbjct: 346 PWRGSPWKQLQITWDEPEILQNVKRVNPWQVE-IAAHAT 383
Score = 44 (20.5 bits), Expect = 3.0e-25, Sum P(3) = 3.0e-25
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 270 DFSSNSNFMSRTQSDGEWLTSPRVKFSQ-----QLFQEAIDDNKNISAWPAHSGHSTPHP 324
+ S NSN + S G L R S+ QLF + I ++ + PA SG
Sbjct: 494 NLSPNSN--TTNLSSGNDLVGNRGPLSKKVNSIQLFGKIITVEEHSESGPAESGLCEEDG 551
Query: 325 SKPNND 330
SK ++D
Sbjct: 552 SKESSD 557
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 214 (80.4 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 42/69 (60%), Positives = 49/69 (71%)
Query: 1 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 60
M+Q P QEL+A DLHG +WRFKH +R PR TTGW+ F TSK+LV GD VF RGE
Sbjct: 157 MSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGE 213
Query: 61 NGELHVGVR 69
GEL VG+R
Sbjct: 214 TGELRVGIR 222
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 163 (62.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 412 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 471
KE K+ K+ M+GV +GR ++L+ Y L ++++F K +
Sbjct: 67 KEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ 126
Query: 472 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 514
+ +VY D EGD +LVGD PW F + VKR+ + + +SP
Sbjct: 127 YTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSP 169
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 157 (60.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTK---WEIVYTDDEGDM 483
KV+M+G+A+GR LDL+ L Y L+D L MF Q H R + + + Y D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 484 MLVGDDPWHEFCNMVKRIFI 503
M VGD PW F VKR+ I
Sbjct: 162 MQVGDVPWEAFAKSVKRLKI 181
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIVYTDDEGDMML 485
KV M+GV +GR LDL GY+ L++ L MFD I G R + Y D +GD M+
Sbjct: 76 KVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRKHHVLTYEDKDGDWMM 134
Query: 486 VGDDPWHEFCNMVKRIFI 503
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 151 (58.2 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 34/97 (35%), Positives = 51/97 (52%)
Query: 413 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQL 466
E + + C + KV M+GV +GR +DL +L GY LI L+ MF+ + +
Sbjct: 70 EEEEQNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDM 129
Query: 467 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 503
+ + Y D EGD M+VGD PW F + V+R+ I
Sbjct: 130 CSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 147 (56.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 413 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQL 466
E + + C + KV M+GV +GR +DL +L GY LI L+ MF+ + +
Sbjct: 72 EEEEENECNSVGSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDM 131
Query: 467 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 503
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 132 CNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKI 168
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 54/176 (30%), Positives = 70/176 (39%)
Query: 346 TSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAXXXXXXXXX 405
T RL G+ S S K V TE I ST S K+ I
Sbjct: 16 TELRL-GLPGTEETVSCGKSNK-RVLPEATEKEIESTGKTETASPPKAQIVGWPPVRSYR 73
Query: 406 XXXXSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-G 464
K+S+S+ + KV M G R +DLT Y L+ LE MF G
Sbjct: 74 KNNVQTKKSESE-----GQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVG 128
Query: 465 QLHTRTKW---EIV--YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 515
+ R + + V Y D +GD MLVGD PW F + KR+ I +VK + G
Sbjct: 129 EYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCG 184
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 136 (52.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 411 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF---DIKGQL- 466
P S ++++C +N KV+ +G A+GR +DL YD L L MF D +G+
Sbjct: 80 PPVSSARRACGGANY--VKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKK 137
Query: 467 -----HTRTKWEIV-YTDDEGDMMLVGDDPWHEFCNMVKRIFI 503
H +V Y D +GD MLVGD PW +F VKR+ I
Sbjct: 138 MANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKI 180
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 137 (53.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 47/158 (29%), Positives = 66/158 (41%)
Query: 366 EKVPVSSLTTEGHIISTISAAADSDGKSDIAXXXXXXXXXXXXXSPKESQSKQSCLTSNR 425
E V +S +T + HI+ + SAA + K P S K S ++
Sbjct: 44 ESVSISKVTNDEHIVESSSAAPPAKAK-------------IVGWPPIRSYRKNSLHEADV 90
Query: 426 SR--TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTR-----TKWEIVYT 477
KV M G R +DL GY L+ LE MF + G+ R +++ Y
Sbjct: 91 GGIFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYE 150
Query: 478 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 515
D +GD MLVGD PW F KR+ I + K + G
Sbjct: 151 DKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGLGCG 188
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 146 (56.5 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 36/98 (36%), Positives = 50/98 (51%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIVY 476
KV M GV +GR +D+ Y++L LEEMF + G L + + + Y
Sbjct: 128 KVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTY 187
Query: 477 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 514
D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 188 EDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAP 225
>UNIPROTKB|Q652A1 [details] [associations]
symbol:IAA26 "Auxin-responsive protein IAA26" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AP005681 EMBL:AK111128 RefSeq:NP_001063732.1 UniGene:Os.57199
EnsemblPlants:LOC_Os09g35870.1 GeneID:4347643
KEGG:dosa:Os09t0527700-01 KEGG:osa:4347643 Gramene:Q652A1
eggNOG:NOG296772 OMA:WEHAVVY ProtClustDB:CLSN2697868 Uniprot:Q652A1
Length = 140
Score = 127 (49.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK--GQLHTRTKWE--IVYTDDEGDMM 484
KV M G R +D+ Y L++ L +MF G + +WE +VY D +GD M
Sbjct: 49 KVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEWEHAVVYEDGDGDWM 108
Query: 485 LVGDDPWHEFCNMVKRIFICSSQDVKKMS 513
LVGD PW F + KR+ + + + + +S
Sbjct: 109 LVGDVPWEMFVSSCKRMRVMRACEARGLS 137
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 142 (55.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 473
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 474 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 519
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 238
>TAIR|locus:2094578 [details] [associations]
symbol:IAA2 "indole-3-acetic acid inducible 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AB026655 HOGENOM:HOG000238261
ProtClustDB:CLSN2681778 EMBL:L15449 EMBL:AF027157 EMBL:AF332392
IPI:IPI00527263 RefSeq:NP_188943.1 UniGene:At.23539 IntAct:P49678
STRING:P49678 EnsemblPlants:AT3G23030.1 GeneID:821877
KEGG:ath:AT3G23030 GeneFarm:3142 TAIR:At3g23030 eggNOG:NOG239673
InParanoid:P49678 OMA:CEREGYK PhylomeDB:P49678
Genevestigator:P49678 GermOnline:AT3G23030 Uniprot:P49678
Length = 174
Score = 126 (49.4 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 34/89 (38%), Positives = 43/89 (48%)
Query: 426 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTRTKWE---IV--YTDD 479
S KV M G R +DL T Y L+ LE MF + G+ R ++ V Y D
Sbjct: 78 SYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDK 137
Query: 480 EGDMMLVGDDPWHEFCNMVKRIFICSSQD 508
+GD MLVGD PW F + KR+ I D
Sbjct: 138 DGDWMLVGDVPWDMFSSSCKRLRIMKGSD 166
>UNIPROTKB|Q6Z5M0 [details] [associations]
symbol:IAA8 "Auxin-responsive protein IAA8" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000005696
eggNOG:NOG267119 EMBL:AP005113 EMBL:AK066518 EMBL:AK108275
RefSeq:NP_001047972.1 UniGene:Os.55536
EnsemblPlants:LOC_Os02g49160.1 GeneID:4330571
KEGG:dosa:Os02t0723400-02 KEGG:osa:4330571 Gramene:Q6Z5M0
Uniprot:Q6Z5M0
Length = 205
Score = 132 (51.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/93 (36%), Positives = 43/93 (46%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------IKGQLHTRTKWEIV 475
KV M+GV +GR LDL L GY L+ L MF + G + +
Sbjct: 107 KVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKVHHVLT 166
Query: 476 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 508
Y D EGD M+ GD PW F VKR+ I + D
Sbjct: 167 YEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 128 (50.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 36/103 (34%), Positives = 48/103 (46%)
Query: 412 KESQSKQSCLTS-NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG---QLH 467
K++ K++ T KV M GV R +DL + GYD L L+++F +G L
Sbjct: 82 KKNSCKEASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALK 141
Query: 468 TRTKWEIV--YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 508
E V Y D +GD ML GD PW F KR+ I D
Sbjct: 142 DGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSD 184
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 126 (49.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/93 (35%), Positives = 44/93 (47%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTRTKW---EIV--YTDDEGD 482
KV M G R +DL+ GY L+ LE MF G+ R + + V Y D +GD
Sbjct: 96 KVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGD 155
Query: 483 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 515
ML+GD PW F KR+ I + K + G
Sbjct: 156 WMLIGDVPWEMFICTCKRLRIMKGSEAKGLGCG 188
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 35/93 (37%), Positives = 43/93 (46%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQLHTRTKWEIV--YTDDEG 481
KV M G R +DL T Y L LE+MF G +R E V Y D +G
Sbjct: 155 KVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDKDG 214
Query: 482 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 514
D MLVGD PW F N +R+ I D ++P
Sbjct: 215 DWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAP 247
>UNIPROTKB|Q6H543 [details] [associations]
symbol:IAA7 "Auxin-responsive protein IAA7" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG303951 EMBL:AP005394 EMBL:AP005756 EMBL:AK121870
RefSeq:NP_001046357.1 UniGene:Os.7355
EnsemblPlants:LOC_Os02g13520.1 GeneID:4328796
KEGG:dosa:Os02t0228900-01 KEGG:osa:4328796 Gramene:Q6H543
OMA:QEDVAIS ProtClustDB:CLSN2692586 Uniprot:Q6H543
Length = 300
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 457 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 509
+E I G L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 232 QEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDL 284
Score = 61 (26.5 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 460
K+ M GV +GR +DL Y+ L ++++F
Sbjct: 181 KINMDGVPIGRKIDLNAFDSYEKLSLAVDKLF 212
Score = 43 (20.2 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 374 TTEGHIISTISAAADSDG-KSDI 395
TT H I+ +AA D DG KS +
Sbjct: 61 TTTKHSIAAAAAADDDDGDKSSM 83
>TAIR|locus:2195820 [details] [associations]
symbol:IAA18 "indole-3-acetic acid inducible 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
KO:K14484 EMBL:AC015448 EMBL:AF367263 EMBL:AY056062 EMBL:AY088406
EMBL:U49074 IPI:IPI00534235 PIR:H96558 RefSeq:NP_175607.1
UniGene:At.16067 IntAct:O24408 STRING:O24408
EnsemblPlants:AT1G51950.1 GeneID:841623 KEGG:ath:AT1G51950
GeneFarm:3181 TAIR:At1g51950 eggNOG:NOG285609 InParanoid:O24408
OMA:MIPQERR PhylomeDB:O24408 ProtClustDB:CLSN2679451
Genevestigator:O24408 GermOnline:AT1G51950 Uniprot:O24408
Length = 267
Score = 106 (42.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 456 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 509
+E+ I G L ++ + Y D+EGD MLVGD PW F + VKR+ + + ++
Sbjct: 198 IEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
Score = 59 (25.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 460
K+ M GV +GR +DL+ Y+ L ++++F
Sbjct: 153 KINMYGVPIGRKVDLSAHNSYEQLSFTVDKLF 184
>TAIR|locus:2139890 [details] [associations]
symbol:IAA11 "indole-3-acetic acid inducible 11"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0009506
GO:GO:0005634 EMBL:CP002687 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AL161573 HOGENOM:HOG000238261
IPI:IPI00846427 RefSeq:NP_001078460.1 UniGene:At.25401
STRING:A8MR39 EnsemblPlants:AT4G28640.2 GeneID:828982
KEGG:ath:AT4G28640 OMA:RTADSMA ProtClustDB:CLSN2685745
Genevestigator:A8MR39 Uniprot:A8MR39
Length = 302
Score = 85 (35.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 474 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 508
+ Y D EGD MLVGD PW F V+R+ I + +
Sbjct: 203 LTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
Score = 84 (34.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 424 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 470
N KV M G+ +GR +DL Y+ L + LEEMF +K +L +RT
Sbjct: 135 NSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMF-LKPKLGSRT 180
>TAIR|locus:2088324 [details] [associations]
symbol:PAP1 "phytochrome-associated protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0006995 "cellular response to
nitrogen starvation" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AP000373 HOGENOM:HOG000238261
UniGene:At.16067 ProtClustDB:CLSN2679451 EMBL:AF088281
EMBL:AF332394 EMBL:AF332401 EMBL:AF386948 EMBL:AY072502
EMBL:AY087745 IPI:IPI00539954 RefSeq:NP_188271.1 UniGene:At.20072
UniGene:At.47260 IntAct:Q8LAL2 EnsemblPlants:AT3G16500.1
GeneID:820898 KEGG:ath:AT3G16500 GeneFarm:3185 TAIR:At3g16500
eggNOG:NOG303951 InParanoid:Q8LAL2 OMA:DEEDHSA PhylomeDB:Q8LAL2
Genevestigator:Q8LAL2 GermOnline:AT3G16500 Uniprot:Q8LAL2
Length = 269
Score = 105 (42.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 462 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 509
I G L + ++ + Y D+EGD MLVGD PW F + VKR+ + S ++
Sbjct: 206 IIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
Score = 60 (26.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 460
K+ M GV +GR +DL Y+ L ++++F
Sbjct: 155 KINMDGVPIGRKVDLNAYNSYEQLSFVVDKLF 186
>TAIR|locus:2011461 [details] [associations]
symbol:IAA6 "indole-3-acetic acid 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;IMP] [GO:0009704 "de-etiolation"
evidence=IMP] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AC019018 GO:GO:0009704 HOGENOM:HOG000238261
KO:K14484 ProtClustDB:CLSN2679755 EMBL:U18408 EMBL:AF336915
EMBL:AY085353 IPI:IPI00524882 PIR:E96569 PIR:S58493
RefSeq:NP_175692.1 UniGene:At.10795 IntAct:Q38824 STRING:Q38824
EnsemblPlants:AT1G52830.1 GeneID:841717 KEGG:ath:AT1G52830
GeneFarm:3152 TAIR:At1g52830 eggNOG:NOG305797 InParanoid:Q38824
OMA:MFKESCK PhylomeDB:Q38824 Genevestigator:Q38824
GermOnline:AT1G52830 Uniprot:Q38824
Length = 189
Score = 117 (46.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG----QLHTRTKWEIVYTDDEGDMM 484
KV M GV R +DL + Y +L+ LE +F G + + ++ I+Y D + D M
Sbjct: 97 KVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYIIIYEDKDRDWM 156
Query: 485 LVGDDPWHEFCNMVKRIFICSSQD 508
LVGD PW F KR+ I D
Sbjct: 157 LVGDVPWQMFKESCKRLRIVKRSD 180
>TAIR|locus:2129910 [details] [associations]
symbol:IAA1 "indole-3-acetic acid inducible" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:Z97336
EMBL:AL161539 HOGENOM:HOG000238261 EMBL:L15448 EMBL:AY133714
IPI:IPI00539077 PIR:A71408 RefSeq:NP_193192.1 UniGene:At.43941
IntAct:P49677 STRING:P49677 DNASU:827103 EnsemblPlants:AT4G14560.1
GeneID:827103 KEGG:ath:AT4G14560 GeneFarm:3140 TAIR:At4g14560
eggNOG:NOG329801 InParanoid:P49677 OMA:CQKLRIM PhylomeDB:P49677
ProtClustDB:CLSN2681778 Genevestigator:P49677 GermOnline:AT4G14560
Uniprot:P49677
Length = 168
Score = 113 (44.8 bits), Expect = 0.00011, P = 0.00011
Identities = 34/104 (32%), Positives = 46/104 (44%)
Query: 411 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTR 469
P S K + N S KV M G R +DL Y L+ LE MF G+ R
Sbjct: 61 PVRSNRKNNN-NKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSER 119
Query: 470 TKWE---IV--YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 508
++ V Y D +GD MLVGD PW F + +++ I +
Sbjct: 120 EGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163
>TAIR|locus:2034200 [details] [associations]
symbol:IAA15 "indole-3-acetic acid inducible 15"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC018848 HOGENOM:HOG000238261
EMBL:AJ441300 IPI:IPI00525123 PIR:F96835 PIR:S58502
RefSeq:NP_178155.1 UniGene:At.33908 IntAct:Q9C966
EnsemblPlants:AT1G80390.1 GeneID:844379 KEGG:ath:AT1G80390
GeneFarm:3170 TAIR:At1g80390 eggNOG:NOG283386 InParanoid:Q9C966
OMA:FTALENM PhylomeDB:Q9C966 ProtClustDB:CLSN2914430
Genevestigator:Q9C966 Uniprot:Q9C966
Length = 179
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 34/93 (36%), Positives = 41/93 (44%)
Query: 422 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----IKGQLHTRTKWEIV-- 475
T R KV + G A R +DL Y L LE MF I K E V
Sbjct: 83 TVRRKYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICRVTELERKGEFVAT 142
Query: 476 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 508
Y D +GD+MLVGD PW F KR+ + + D
Sbjct: 143 YEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGD 175
>UNIPROTKB|Q75GK1 [details] [associations]
symbol:IAA12 "Auxin-responsive protein IAA12" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145379 EMBL:AK073044 RefSeq:NP_001050714.1 UniGene:Os.9945
STRING:Q75GK1 EnsemblPlants:LOC_Os03g43410.1 GeneID:4333512
KEGG:dosa:Os03t0633800-01 KEGG:osa:4333512 Gramene:Q75GK1
eggNOG:NOG272839 OMA:TCKKLRI ProtClustDB:CLSN2694101 Uniprot:Q75GK1
Length = 226
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 38/134 (28%), Positives = 58/134 (43%)
Query: 385 AAADSDGKSDIAXXXXXXXXXXXXXSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 444
+AA S K+ ++ +P + S + S KV M G R +DL
Sbjct: 89 SAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGG-SLVKVSMDGAPYLRKIDLR 147
Query: 445 TLVGYDHLIDELEEMFD-IKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRI 501
GY L + LE MF G +++ I Y D +GD+MLVGD P+ F + K++
Sbjct: 148 MYKGYRELREALEAMFVCFSGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKL 207
Query: 502 FICSSQDVKKM-SP 514
I + + SP
Sbjct: 208 RIMKRSEATGLGSP 221
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 111 (44.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 2 NQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEN 61
N S L +D++G WRF++ + + ++LT GWS FV KRL AGD F R +
Sbjct: 217 NVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSND 276
Score = 50 (22.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 337 ETGRKTETGTSCRLFGIEL-INHATSSAPSEKVPVSSL 373
++G ETG RLFG+++ +N + +V +SSL
Sbjct: 288 KSGLDLETGRVMRLFGVDISLNAVVVVKETTEVLMSSL 325
>TAIR|locus:2196184 [details] [associations]
symbol:IAA34 "indole-3-acetic acid inducible 34"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC012189 EMBL:AJ458327
EMBL:AF334713 IPI:IPI00539053 PIR:B86284 RefSeq:NP_172959.2
UniGene:At.17166 IntAct:Q9C5X0 DNASU:838070
EnsemblPlants:AT1G15050.1 GeneID:838070 KEGG:ath:AT1G15050
GeneFarm:3196 TAIR:At1g15050 eggNOG:NOG305135 HOGENOM:HOG000090886
OMA:RITRRND PhylomeDB:Q9C5X0 ProtClustDB:CLSN2915091
ArrayExpress:Q9C5X0 Genevestigator:Q9C5X0 GermOnline:AT1G15050
Uniprot:Q9C5X0
Length = 185
Score = 112 (44.5 bits), Expect = 0.00034, P = 0.00034
Identities = 29/85 (34%), Positives = 44/85 (51%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR-----TKWEIVYTDDEGDM 483
KV M G+ VGR + + Y L +LE+MF ++ R +++ +VY D+EG
Sbjct: 96 KVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEEGLW 155
Query: 484 MLVGDDPWHEFCNMVKRIFICSSQD 508
GD PW+EF V+R+ I D
Sbjct: 156 RNAGDVPWNEFIESVERLRITRRND 180
>UNIPROTKB|Q8LQ74 [details] [associations]
symbol:IAA6 "Auxin-responsive protein IAA6" species:39947
"Oryza sativa Japonica Group" [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=IC] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733 GO:GO:0006417
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2691827 eggNOG:NOG303951 EMBL:AP003768
EMBL:AK068600 RefSeq:NP_001044208.1 UniGene:Os.75606 STRING:Q8LQ74
DNASU:4326541 EnsemblPlants:LOC_Os01g53880.2
EnsemblPlants:LOC_Os01g53880.3 EnsemblPlants:LOC_Os01g53880.4
EnsemblPlants:LOC_Os01g53880.5 EnsemblPlants:LOC_Os01g53880.6
GeneID:4326541 KEGG:dosa:Os01t0741900-01 KEGG:osa:4326541
Gramene:Q8LQ74 Uniprot:Q8LQ74
Length = 335
Score = 95 (38.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 471 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 509
++ +VY D EGD MLVGD PW F + KR+ + S ++
Sbjct: 286 EYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSEL 324
Score = 66 (28.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 460
K+ M G+ +GR +DL YD L ++++F
Sbjct: 221 KINMDGIPIGRKIDLAAYNSYDGLSSAVKQLF 252
>TAIR|locus:2038701 [details] [associations]
symbol:IAA32 "indole-3-acetic acid inducible 32"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 EMBL:CP002685
GO:GO:0009733 GO:GO:0009734 GO:GO:0009555 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 EMBL:AC006200 EMBL:AJ458329
IPI:IPI00519467 PIR:G84421 RefSeq:NP_973390.1 UniGene:At.42513
IntAct:Q8RYC6 PRIDE:Q8RYC6 EnsemblPlants:AT2G01200.2 GeneID:814648
KEGG:ath:AT2G01200 GeneFarm:3190 TAIR:At2g01200 eggNOG:NOG327040
InParanoid:Q8RYC6 OMA:DVPWKEF PhylomeDB:Q8RYC6
ProtClustDB:CLSN2681132 Genevestigator:Q8RYC6 Uniprot:Q8RYC6
Length = 191
Score = 111 (44.1 bits), Expect = 0.00052, P = 0.00052
Identities = 30/85 (35%), Positives = 41/85 (48%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---IKGQ--LHTRTKWEIVYTDDEGDM 483
KV + G+ VGR + L Y L +L +MF + G T +++ +VY D EG
Sbjct: 102 KVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREGIW 161
Query: 484 MLVGDDPWHEFCNMVKRIFICSSQD 508
VGD PW EF V R+ I D
Sbjct: 162 RNVGDVPWKEFVESVDRMRIARRND 186
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 111 (44.1 bits), Expect = 0.00057, P = 0.00057
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI--KGQLHTRTKWEIVYTDDEGDMMLV 486
KV M G R +DL GY L D L+ +F + + + Y D +GD+ML
Sbjct: 112 KVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASASAAHFAVAYEDKDGDLMLA 171
Query: 487 GDDPWHEFCNMVKRIFICSSQDVK 510
GD PW F + K++ I + +
Sbjct: 172 GDVPWDMFISSCKKLRIMRGSEAR 195
>TAIR|locus:2018374 [details] [associations]
symbol:AXR3 "AT1G04250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009734 "auxin mediated signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009733 "response to auxin stimulus" evidence=IEP;IMP;TAS]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
EMBL:U49073 EMBL:AF040631 EMBL:AF040632 EMBL:AF336916 EMBL:AY070094
EMBL:AY117183 EMBL:AY087284 IPI:IPI00548274 PIR:H86173
RefSeq:NP_171921.1 UniGene:At.20252 IntAct:P93830 STRING:P93830
DNASU:839568 EnsemblPlants:AT1G04250.1 GeneID:839568
KEGG:ath:AT1G04250 GeneFarm:3180 TAIR:At1g04250 eggNOG:NOG250798
InParanoid:P93830 OMA:KEGSTTH PhylomeDB:P93830
ProtClustDB:CLSN2914376 Genevestigator:P93830 GermOnline:AT1G04250
Uniprot:P93830
Length = 229
Score = 90 (36.7 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 472 WEIV--YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 514
W+ V Y D +GD MLVGD PW F + KR+ + D ++P
Sbjct: 175 WDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAP 219
Score = 55 (24.4 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 460
KV M G R +DL YD L + L MF
Sbjct: 114 KVSMDGAPYLRKIDLRMYKSYDELSNALSNMF 145
Score = 42 (19.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 300 FQEAIDDNKNISAWPAHSGHSTPH 323
F E +D N++ PA+ ST H
Sbjct: 34 FSETVDLKLNLNNEPANKEGSTTH 57
>UNIPROTKB|Q5NB25 [details] [associations]
symbol:IAA3 "Auxin-responsive protein IAA3" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AP001550 EMBL:AP001859 EMBL:AK104654
RefSeq:NP_001042495.1 UniGene:Os.12733
EnsemblPlants:LOC_Os01g13030.1 EnsemblPlants:LOC_Os01g13030.2
GeneID:4325890 KEGG:dosa:Os01t0231000-01 KEGG:osa:4325890
Gramene:Q5NB25 OMA:CHIVFRS Uniprot:Q5NB25
Length = 263
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 429 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQLHTRT-KWEIVYTDDEGD 482
KV M G R +DL T Y + LE+MF +G + + ++ + Y D +GD
Sbjct: 162 KVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGD 221
Query: 483 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 514
MLVGD PW F + +R+ I D ++P
Sbjct: 222 WMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAP 253
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 115 (45.5 bits), Expect = 0.00091, P = 0.00091
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 13 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVG 67
+D++G WRF++ + + ++LT GWS FV K L AGD F R G++ +L++G
Sbjct: 231 EDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 537 492 0.00082 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 624 (66 KB)
Total size of DFA: 315 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.85u 0.13s 38.98t Elapsed: 00:00:02
Total cpu time: 38.86u 0.13s 38.99t Elapsed: 00:00:02
Start: Mon May 20 21:00:40 2013 End: Mon May 20 21:00:42 2013