BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009329
(537 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359475690|ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/505 (79%), Positives = 452/505 (89%), Gaps = 1/505 (0%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++YN+MTQQKE+F P+V GKV MYVCGVTAYDLSHLGHARAAV FD+LYRYL+HL EV
Sbjct: 7 LRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLGYEV 66
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKIIRRAN+LGENPL+LS+R+CQEYL DM DLQCL PT QPRVSDHM+QI
Sbjct: 67 TYVRNFTDVDDKIIRRANELGENPLTLSSRFCQEYLDDMTDLQCLTPTQQPRVSDHMDQI 126
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQIINNDCAY+++GDV+FAV+KSPNYGRLSG++LE+NRAGERVAVDSRKRNPADFA
Sbjct: 127 KDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDSRKRNPADFA 186
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK EPSWDSPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 187 LWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQS 246
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAACQ+SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT+ YHPLALR+FL+ HYRSP+
Sbjct: 247 CAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTHYRSPV 306
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE-HGKTARINPAAEDCINKLRDEFHARM 377
NYS+ QL+ AS+AVFYIYQTL+DCE LSPFQE +G+ I PAA+DCI+KL+ +F +M
Sbjct: 307 NYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVCITPAAKDCISKLQTDFQTKM 366
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
SDDL+T HIL + Q+AL+FINS LNMLKKKQ KQQQLS ++SL ++E EVK VL +LGL
Sbjct: 367 SDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVLSVLGL 426
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L AYSEVLQQLK KAL+RA + E+DVL LIEERA ARKNK+FS+ DQIRADL KGIA
Sbjct: 427 LSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALARKNKNFSRGDQIRADLASKGIA 486
Query: 498 LMDMGKETIWRPCVLVEQEQEAPPA 522
LMD+GKETIWRPCV VEQE +AP A
Sbjct: 487 LMDVGKETIWRPCVPVEQEPQAPAA 511
>gi|359496172|ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/505 (78%), Positives = 446/505 (88%), Gaps = 1/505 (0%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++YN+MTQQKE+ P+V GKV MYVCGVTAYDLSHLGH RAAVSFD+LYRYL+HL EV
Sbjct: 7 LRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGYEV 66
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKIIRRAN+LGENPL+LS+ +CQEYL DM DL CL PT+QPRVSDHM+QI
Sbjct: 67 TYVRNFTDVDDKIIRRANELGENPLTLSSHFCQEYLDDMTDLHCLSPTHQPRVSDHMDQI 126
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQIINNDCAY ++GDV+FAV+KSPNYGRLSG++LENNRAGERVAVDSRKRNPADFA
Sbjct: 127 KDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVDSRKRNPADFA 186
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 187 LWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQS 246
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAACQ+SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT+ YHPLALR+FL+ HYRSP+
Sbjct: 247 CAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTHYRSPV 306
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE-HGKTARINPAAEDCINKLRDEFHARM 377
NYS+ QL+ AS+AVFYIYQTL+DCE LS FQE +G+ I PAA+DCI L+ +F +M
Sbjct: 307 NYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVCIAPAAQDCIRTLQTDFQTKM 366
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
SDDL+T HIL + Q+AL+FINS LNMLKKKQ KQQQLS +ESL K+ EVK VL +LGL
Sbjct: 367 SDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVESLTKLGKEVKGVLSVLGL 426
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L AYSEVLQQLK KALKRA + E+DVL LIEERA ARKNKDFSK DQIRADL KGIA
Sbjct: 427 LSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKDFSKGDQIRADLASKGIA 486
Query: 498 LMDMGKETIWRPCVLVEQEQEAPPA 522
LMD+GKETIWRPCV V+QE +AP +
Sbjct: 487 LMDVGKETIWRPCVPVQQEPQAPAS 511
>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/519 (76%), Positives = 453/519 (87%), Gaps = 9/519 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNSMTQQKE+F +PGKV MYVCGVT+YD SHLGHARAAV+FD+L+RYL+HL EV
Sbjct: 7 LKLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYLQHLGYEV 66
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTD+DDKIIRRAN++GE+PLSLS+R+C+EYLVDM DLQCL PT+QPRV+DH+EQI
Sbjct: 67 TYVRNFTDIDDKIIRRANEIGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQPRVTDHVEQI 126
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQII DCAY VEGDVFFAV KSPNYG+LSGQRLENNRAGERVAVDSRKRNPADFA
Sbjct: 127 KDMITQIIEKDCAYAVEGDVFFAVNKSPNYGQLSGQRLENNRAGERVAVDSRKRNPADFA 186
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 187 LWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGIDLIFPHHENEIAQS 246
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC++S+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL
Sbjct: 247 CAACEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 306
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH------GKTAR---INPAAEDCINKL 369
NYSV QL+S+SDAVFYIYQTLQDCE AL PFQE G+ A I A+ CI++L
Sbjct: 307 NYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAGQNANLVAITADAQKCISRL 366
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
++F +MSDDLNTS +LTGAFQ+ALK +N SL MLKKKQ K+QQLSLI S+ +++ EV
Sbjct: 367 HEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQKKQQLSLIRSVTEVKKEVT 426
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
EVLRILGL PP +EVLQQLK KALKRA LTE+DV+ LIE+RA ARK++DF KSDQIR
Sbjct: 427 EVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIEDRAVARKSQDFKKSDQIRT 486
Query: 490 DLTRKGIALMDMGKETIWRPCVLVEQEQEAPPAEKEKKP 528
DL+ +GIALMD+GKET+WRPCV VE E++A +E P
Sbjct: 487 DLSARGIALMDVGKETVWRPCVPVENEEKAKTVVEEPTP 525
>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 530
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/524 (74%), Positives = 449/524 (85%), Gaps = 10/524 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ K+YN+M +Q E F P VPGKVGMYVCGVTAY SH+GHARAAV FD+L+RYL+HL
Sbjct: 5 VEFKLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHLGY 64
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTY RNFTD+DDKII+RAN+ GE+P SLS+R+C+EYLVDM LQCL PT+QPRV+DH+E
Sbjct: 65 EVTYARNFTDIDDKIIKRANESGEDPFSLSSRFCEEYLVDMDSLQCLRPTHQPRVTDHIE 124
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QIKDMITQIINN AY EGDVFFAV+K PNYG+LSGQ+LEN+RAGER D+RKRNPAD
Sbjct: 125 QIKDMITQIINNGFAYPSEGDVFFAVDKFPNYGQLSGQKLENHRAGERNP-DTRKRNPAD 183
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSW+SPWGPGRPGWHIECSAMSA YL+ KFDIHGGG DLIFPHHENEI
Sbjct: 184 FALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSDLIFPHHENEIT 243
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AACQ+SNVSYW+HNGHVTNNNEKMSKSLGN+FTIR++TERYHPLA+RHFLISAHYRS
Sbjct: 244 QSAAACQESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTERYHPLAVRHFLISAHYRS 303
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ---------EHGKTARINPAAEDCIN 367
PLNY+V QL+SASDA+FYIYQTLQDCE ALS FQ ++ K I A+ CIN
Sbjct: 304 PLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKEGAAQNSKVVGITADAKKCIN 363
Query: 368 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
KLRDEF +MSDDL+TSHILTGAFQDALKFINSS++MLKKK K QQLSLI+SL +IE E
Sbjct: 364 KLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKKKLQKPQQLSLIQSLTEIERE 423
Query: 428 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
+K VL ILGLLPPG Y+E+LQQLKDKALKRA +TE+DVL+ IEERA ARKNK+FS+SDQ+
Sbjct: 424 IKLVLNILGLLPPGTYAEILQQLKDKALKRAGVTEDDVLRSIEERAQARKNKEFSRSDQV 483
Query: 488 RADLTRKGIALMDMGKETIWRPCVLVEQEQEAPPAEKEKKPAAT 531
RA+L KGIALMD+GKET+WRPCV VEQEQEA K++ P T
Sbjct: 484 RANLAAKGIALMDVGKETVWRPCVPVEQEQEAVSVVKDQNPPPT 527
>gi|449464950|ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/527 (75%), Positives = 449/527 (85%), Gaps = 13/527 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++YNSMTQQKE+FT PGKVGMYVCG+TAYD SH+GHARAAV+FD+LYRYL+HL EV
Sbjct: 6 FRVYNSMTQQKEVFTTKEPGKVGMYVCGITAYDFSHIGHARAAVNFDVLYRYLKHLGYEV 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKIIRRAN+ GENP +LS+R+CQEYL DMADLQCL PT+QPRVSDH+EQI
Sbjct: 66 TYVRNFTDVDDKIIRRANESGENPFALSDRFCQEYLSDMADLQCLSPTHQPRVSDHLEQI 125
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQII N Y V+GDVFF+V+K PNYG+LSGQ+LEN+RAGERVAVDSRK NPADFA
Sbjct: 126 KDMITQIIKNGYGYAVDGDVFFSVDKFPNYGQLSGQKLENHRAGERVAVDSRKNNPADFA 185
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENE+AQS
Sbjct: 186 LWKAAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEVAQS 245
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAACQ+S +SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL LRHFLISAHYRSPL
Sbjct: 246 CAACQESKISYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLVLRHFLISAHYRSPL 305
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH------GKTARINP---AAEDCINKL 369
NY+V QLDSASD V+YIYQT+QDCE ALS Q GKT + +P AAE+CI L
Sbjct: 306 NYTVSQLDSASDTVYYIYQTMQDCEDALSQHQGENLSDGLGKTGKKDPVSSAAEECIINL 365
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
R EF RM+DDLNT+HILTGAFQ+ALKFINS+L LKKKQPK+QQLS+I+SL ++ E++
Sbjct: 366 RSEFQTRMADDLNTAHILTGAFQEALKFINSTLTSLKKKQPKKQQLSMIQSLVNVKKELR 425
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
EVL +LGLL YSEVLQQLKDKALKRA + E+D+L LIEER ARK+K+F KSD IRA
Sbjct: 426 EVLDVLGLLSTSTYSEVLQQLKDKALKRAGMVEDDILHLIEERTQARKDKNFGKSDNIRA 485
Query: 490 DLTRKGIALMDMGKETIWRPCVLVEQEQEAPPAEKEKKPAATGEEQK 536
L+ GIALMD+G+ETIWRPCV VE PP E++ AT EQK
Sbjct: 486 KLSSLGIALMDVGRETIWRPCVPVEPAVLVPPGEQK----ATQAEQK 528
>gi|356575566|ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 553
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/529 (70%), Positives = 441/529 (83%), Gaps = 13/529 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+IYNSM+QQKE+F VPGKV MYVCGVTAYD SHLGHARAAVSFD+L+RYL+HL E+
Sbjct: 8 FRIYNSMSQQKEIFKTKVPGKVSMYVCGVTAYDFSHLGHARAAVSFDILFRYLKHLDYEI 67
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKII+RAN+ GE+PL LSNR+C EY DMADLQC P+ +PRVS+H+ +I
Sbjct: 68 TYVRNFTDVDDKIIKRANETGEDPLMLSNRFCDEYNADMADLQCKTPSKEPRVSEHLNEI 127
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQII+N AY V+GDVF+AV+K PNYG LSGQRLE+NRAGERVAVDSRKR+PADFA
Sbjct: 128 KDMITQIISNGYAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKRHPADFA 187
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 188 LWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHKFDIHGGGIDLIFPHHENEIAQS 247
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL
Sbjct: 248 WAADHESHVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 307
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRDEF 373
NYS+ QL+++SDA++YI+QTLQDC+ A+SP +++ K +IN AA++CI KL EF
Sbjct: 308 NYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQINEAAKECIKKLNVEF 367
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+MSDDL T ILTGA Q+ALKF+N+SL MLKKK K+ QL LI+SL ++E EV +VL
Sbjct: 368 QTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQSLLEVEKEVGKVLD 427
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGLL +Y+EVL QLKDKAL RA LTE++VL LIEER AR NKDF+KSD++RADL
Sbjct: 428 VLGLLSSKSYAEVLHQLKDKALNRAGLTEDEVLHLIEERTQARINKDFAKSDKMRADLAT 487
Query: 494 KGIALMDMGKETIWRPCV--------LVEQEQEAPPAEKEKKPAATGEE 534
KGIALMD+G E IWRPC+ +V ++Q AP E+++ ++ ++
Sbjct: 488 KGIALMDVGNEIIWRPCIPSEPLVAEVVHRDQRAPTVEEKQSSSSVNQK 536
>gi|356536300|ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 548
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/524 (71%), Positives = 434/524 (82%), Gaps = 18/524 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+IYNSMTQQKE+F VPGKV MYVCGVTAYD SHLGHARAAVSFD+L+RYL+HL E+
Sbjct: 8 FRIYNSMTQQKEIFKTKVPGKVSMYVCGVTAYDFSHLGHARAAVSFDILFRYLKHLGYEI 67
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRNFTDVDDKII+RAN+ GE+PL LSNR+C EY DMADLQC P+ +PRVS+H+ +I
Sbjct: 68 TYVRNFTDVDDKIIKRANETGEDPLMLSNRFCDEYNADMADLQCETPSREPRVSEHLNEI 127
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
KDMITQIINN AY V+GDVF+AV+K PNYG LSGQRLE+NRAGERVAVDSRKR+PADFA
Sbjct: 128 KDMITQIINNGYAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKRHPADFA 187
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQS
Sbjct: 188 LWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHKFDIHGGGIDLIFPHHENEIAQS 247
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA DS+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH LALRHFLISAHYRSPL
Sbjct: 248 WAADHDSHVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHSLALRHFLISAHYRSPL 307
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRDEF 373
NYS+ QL+++SDA++YI+QTLQDC+ A+SP +++ K +IN AA++CI KL EF
Sbjct: 308 NYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQINEAAKECIKKLNVEF 367
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+MSDDL T ILTGA Q+ALKF+N+SL MLKKK K+ QL LI+SL ++E V +VL
Sbjct: 368 QTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQSLLEVEKVVGKVLD 427
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGLL +Y+EVLQQLKDKALKRA LTE++VL LI+ER AR NKDF+KSD++RADL
Sbjct: 428 VLGLLSSKSYAEVLQQLKDKALKRAGLTEDEVLHLIDERTQARINKDFAKSDKMRADLAT 487
Query: 494 KGIALMDMGKETIWRPCV-------------LVEQEQEAPPAEK 524
KGIALMD+G E WRPC+ +VE++Q P +K
Sbjct: 488 KGIALMDVGNEITWRPCIPSEPLVAEVVQRPIVEEKQSTPVNQK 531
>gi|357444709|ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355481680|gb|AES62883.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 552
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/500 (73%), Positives = 422/500 (84%), Gaps = 5/500 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YNSM +KE+F P V GKV MYVCGVTAYDLSHLGHARAAVSFD+L+RYL+HL
Sbjct: 14 VELKLYNSMNNEKEIFNPKVAGKVSMYVCGVTAYDLSHLGHARAAVSFDILFRYLKHLDY 73
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII RAN+ G +P LS +C EY VDM+DL C PT +PRVSDH++
Sbjct: 74 EVTYVRNFTDVDDKIINRANEKGVDPFELSRHFCDEYNVDMSDLLCERPTKEPRVSDHID 133
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QIKDMITQIINND AY V GDVF++VEK PNYG LSGQRLE+NRAGERVAVDSRK +PAD
Sbjct: 134 QIKDMITQIINNDYAYEVNGDVFYSVEKCPNYGALSGQRLEHNRAGERVAVDSRKHHPAD 193
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YLS KFDIHGGGIDLIFPHHENEIA
Sbjct: 194 FALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGIDLIFPHHENEIA 253
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA ++S++SYW+HNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS
Sbjct: 254 QSWAADKESHISYWLHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 313
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRD 371
PLNYS+ QL+++SDA++YI+QTL+DC LS F ++ K IN AA++CI KL+D
Sbjct: 314 PLNYSITQLETSSDAIYYIFQTLEDCRDTLSSFLQEDTEKKEKVPPINDAAKECIKKLKD 373
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
EF +MSDDL T ILTGA Q+ALKF+N SL MLKKK K+ QL L++SL ++E E +E+
Sbjct: 374 EFQTKMSDDLQTPVILTGALQEALKFMNGSLKMLKKKMQKRAQLQLVQSLLEVEKEAREI 433
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
L++LGLL +Y+EVLQQLKDKALKRA LTE +VL+ IEER AR NKDF+KSD +R DL
Sbjct: 434 LKVLGLLSSLSYAEVLQQLKDKALKRAGLTEVEVLKSIEERRQARINKDFAKSDNVRTDL 493
Query: 492 TRKGIALMDMGKETIWRPCV 511
T KGIALMD+G ETIWRPC+
Sbjct: 494 TAKGIALMDVGNETIWRPCI 513
>gi|15241557|ref|NP_198699.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 511
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/498 (69%), Positives = 416/498 (83%), Gaps = 5/498 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MTQQKE+ PI PGK+G+YVCG+TAYD SH+GHARAAVSFD+LYRYL+HL
Sbjct: 6 MELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLDY 65
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTDVDDKII RAN GE+PL LSNR+C EYLVDM LQCLPPT+QPRVS+HM+
Sbjct: 66 DVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMD 125
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDSRKRNPAD
Sbjct: 126 NIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPAD 185
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK EPSW+SPWGPGRPGWHIECSAMS HYLS KFDIHGGG DL FPHHENEIA
Sbjct: 186 FALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIA 245
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL+SA YRS
Sbjct: 246 QTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRS 305
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDCINKLRDE 372
PL+++ QL+S+S+A++Y+YQTLQD + LSP+Q E G + +D I KL+ E
Sbjct: 306 PLSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSEDGGKSEQTAEGKDIIKKLKTE 365
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F ++M DDLNT+HILTGA+QDALKFIN+SL+ LKK Q K+Q++S++ SL +IE +EVL
Sbjct: 366 FESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQ-KKQRMSMLVSLVEIEKAAREVL 424
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGLL +Y+E+L+++K K L RAE+ EE + QLIEER ARKNKDF+KSD+IR LT
Sbjct: 425 DVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLT 484
Query: 493 RKGIALMDMGKETIWRPC 510
RKGIALMD+GKET+WRPC
Sbjct: 485 RKGIALMDIGKETVWRPC 502
>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/498 (69%), Positives = 416/498 (83%), Gaps = 5/498 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MTQQKE+ PI PGK+G+YVCG+TAYD SH+GHARAAVSFD+LYRYL+HL
Sbjct: 6 MELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLGY 65
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +VRNFTDVDDKII RAN+ GE+PL LSNR+C+EYLVDM LQCL PT+QPRVS+HM+
Sbjct: 66 EVNFVRNFTDVDDKIIIRANENGEDPLDLSNRFCEEYLVDMGALQCLLPTHQPRVSEHMD 125
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDSRKRNPAD
Sbjct: 126 HIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPAD 185
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK EPSW+SPWGPGRPGWHIECSAMSAHYLS KFDIHGGG DL FPHHENEIA
Sbjct: 186 FALWKAAKPEEPSWESPWGPGRPGWHIECSAMSAHYLSPKFDIHGGGADLKFPHHENEIA 245
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL+SA YRS
Sbjct: 246 QTCAACEDSGVNYWLHNGHVTINNEKMAKSKKNFKTIREITASYHPLALRHFLMSAQYRS 305
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDCINKLRDE 372
PL++S QL+S+SDA++Y+YQTLQD + LSP++ E G A P +D I KL+ E
Sbjct: 306 PLSFSASQLESSSDALYYVYQTLQDLDEDLSPYREALSEDGGKAEQTPEGKDIIKKLKSE 365
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F ++M DDLNT+HILTGA+QDALKFIN++ + LKK Q K+Q++S++ SL +IE +EVL
Sbjct: 366 FESKMLDDLNTAHILTGAYQDALKFINANRSKLKKMQ-KKQRMSMLVSLVEIEKAAREVL 424
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGLL +Y+EVL+++K K L RAE+ EED+L+ IE+R AR NKDF+KSD+IR LT
Sbjct: 425 DVLGLLTTLSYAEVLKEMKLKTLIRAEMGEEDILREIEDRITARNNKDFAKSDEIREKLT 484
Query: 493 RKGIALMDMGKETIWRPC 510
RKGIALMD GKET+WRPC
Sbjct: 485 RKGIALMDFGKETVWRPC 502
>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
Length = 500
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/498 (68%), Positives = 407/498 (81%), Gaps = 16/498 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MTQQKE+ PI PGK+G+YVCG+TAYD SH+GHARAAVSFD+LYRYL+HL
Sbjct: 6 MELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLDY 65
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTDVDDKII RAN GE+PL LSNR+C EYLVDM LQCLPPT+QPRVS+HM+
Sbjct: 66 DVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMD 125
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDSRKRNPAD
Sbjct: 126 NIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPAD 185
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK EPSW+SPWGPGRPGWHIECSAMS HYLS KFDIHGGG DL FPHHENEIA
Sbjct: 186 FALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIA 245
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL+SA YRS
Sbjct: 246 QTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRS 305
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDCINKLRDE 372
PL+++ QL+S+S+A++ LSP+Q E G + +D I KL+ E
Sbjct: 306 PLSFTASQLESSSEALY-----------CLSPYQDALSEDGGKSEQTAEGKDIIKKLKTE 354
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F ++M DDLNT+HILTGA+QDALKFIN+SL+ LKK Q K+Q++S++ SL +IE +EVL
Sbjct: 355 FESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQ-KKQRMSMLVSLVEIEKAAREVL 413
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGLL +Y+E+L+++K K L RAE+ EE + QLIEER ARKNKDF+KSD+IR LT
Sbjct: 414 DVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLT 473
Query: 493 RKGIALMDMGKETIWRPC 510
RKGIALMD+GKET+WRPC
Sbjct: 474 RKGIALMDIGKETVWRPC 491
>gi|359476173|ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
Length = 571
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/516 (64%), Positives = 401/516 (77%), Gaps = 8/516 (1%)
Query: 5 KETGTVAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSF 64
K +G L +YN+M++QKE+F P V G+VGMYVCGVTAYDLSH+GHAR VSF
Sbjct: 61 KNSGGEGVENRRAELWLYNTMSRQKEVFKPKVDGRVGMYVCGVTAYDLSHIGHARVYVSF 120
Query: 65 DLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP 124
D+LYRYL HL+ EV YVRNFTDVDDKII RAN++GE+P++LS RYCQE+ VDM L CLP
Sbjct: 121 DVLYRYLRHLEYEVNYVRNFTDVDDKIIARANEMGEDPINLSRRYCQEFHVDMTYLHCLP 180
Query: 125 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 184
P+ +P VSDHM QI DMI QII+NDCAY VEGDV+F+V+K P YGRLSG+++E+NRAGER
Sbjct: 181 PSVEPCVSDHMPQIIDMIKQIIDNDCAYRVEGDVYFSVDKFPEYGRLSGRKVEDNRAGER 240
Query: 185 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 244
VAVDSRK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL FDIHGGG+
Sbjct: 241 VAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGM 300
Query: 245 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
DL+FPHHENEIAQSCAAC+ SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLA
Sbjct: 301 DLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQVIDIYHPLA 360
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
LR FLI HYRSP+NYS +QL+SASD VFYIYQTL DC+ A+ + K + P D
Sbjct: 361 LRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHDCQNAMDQ-DDMTKKDSVPPHILD 419
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
CINK ++F MSDDL+T +L A D LK IN ++L ++ K+Q+L L ESL +
Sbjct: 420 CINKFYNDFLTSMSDDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKQELRL-ESLAAL 474
Query: 425 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
E +++VL ILGL+ P +YSE L QL++KALKR++LTE+ +LQ IEER ARKNK++ KS
Sbjct: 475 EKVIRDVLTILGLM-PASYSEALLQLREKALKRSKLTEDHILQKIEERTMARKNKEYEKS 533
Query: 485 DQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEA 519
D IR DL GIALMD T WRP + L QEQ A
Sbjct: 534 DAIRKDLAAVGIALMDSPDGTTWRPAIPLALQEQVA 569
>gi|357499285|ref|XP_003619931.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355494946|gb|AES76149.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 584
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/514 (64%), Positives = 393/514 (76%), Gaps = 49/514 (9%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L++YNS + E+F P V GKV MYVCGVT+YD SHLGHARAA+SFD+L RYL+HLK E
Sbjct: 50 SLQLYNSKNNEMEVFEPEVKGKVSMYVCGVTSYDYSHLGHARAAISFDILVRYLKHLKYE 109
Query: 78 VTYVRNFTDVDDK------------IIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPP 125
VTYVRNFTD+ II+RAN+ G +PL LS +C EY VDM+DL C P
Sbjct: 110 VTYVRNFTDIIIIYLFIYFFEEAKLIIKRANEKGVDPLELSRHFCDEYNVDMSDLLCERP 169
Query: 126 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 185
T +PRVSDH++QIKDMIT+IINND AY V+GDVF++VEK PNYG LSGQR
Sbjct: 170 TKEPRVSDHIDQIKDMITKIINNDFAYEVDGDVFYSVEKFPNYGALSGQR---------- 219
Query: 186 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 245
KR+PADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YLS KFDIHGGGID
Sbjct: 220 -----KRHPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGID 274
Query: 246 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
LIFPHHENEIAQ+ AA ++S + YW+HNGHVTNNNEKMSKSLGNFFT+R+ITERYHPLAL
Sbjct: 275 LIFPHHENEIAQNRAADKESRIKYWLHNGHVTNNNEKMSKSLGNFFTVREITERYHPLAL 334
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQ------TLQDCEVALSPF--QEHGKTAR 357
RHFLISAHYR+PLNYS+ QL+++SDA++YI+Q TL+DC ALS F ++ K +
Sbjct: 335 RHFLISAHYRAPLNYSIAQLETSSDAIYYIFQTSSSLKTLEDCRDALSSFLQEDSEKKDQ 394
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
IN AAE CINKL++EF M+DDL T IL GA +ALKF+N SL Q KQ
Sbjct: 395 IN-AAEKCINKLKEEFQTEMNDDLQTHVILKGALLEALKFMNRSL------QFKQ----- 442
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 477
SL K+E EV+EVL++LGLL +Y+EVLQQLKDKALKRA LTE++VL+LIEER AR
Sbjct: 443 --SLLKVEQEVREVLKVLGLLSSLSYAEVLQQLKDKALKRAGLTEKEVLKLIEERKQARI 500
Query: 478 NKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 511
NKDF+KSD IR DLT KGIAL D+ E IWRPC+
Sbjct: 501 NKDFAKSDNIRTDLTAKGIALEDVDNEMIWRPCI 534
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/502 (62%), Positives = 386/502 (76%), Gaps = 13/502 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+M++ K+LF P V GKVGMYVCGVTAYDLSH+GHAR V+FD+LYRYL+HL +V
Sbjct: 71 LYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLKHLGYDV 130
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN+LGE+P+SLS RYC+E+ DM L CLPP+ +P VSDHM QI
Sbjct: 131 CYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHNDMVYLHCLPPSIEPCVSDHMPQI 190
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI QI++N CAY ++GDV+F+++ P YG+LSG++LE+NRAGERVAVDSRK+NPADFA
Sbjct: 191 INMIKQILDNGCAYRIDGDVYFSIDGYPEYGKLSGRKLEDNRAGERVAVDSRKKNPADFA 250
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 251 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQS 310
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC+ SN+SYW+HNG VT N+EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 311 CAACRGSNISYWVHNGFVTINSEKMSKSLGNFFTIRQVIDLYHPLALRFFLLGTHYRSPV 370
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS +QL+SAS+ +FYIYQTL DCE +S + + + D INK D F MS
Sbjct: 371 NYSDVQLESASERIFYIYQTLHDCETVISQHETAFEKDSVPSDTLDGINKFSDVFVTSMS 430
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL+T +L A D LK IN L+ K+ I+SL +E V++ L +LGL+
Sbjct: 431 DDLHTP-VLLAALSDPLKIINDMLHTRKR----------IQSLAALEKIVRDALSVLGLM 479
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P YSEVLQQL++KAL+RA+LTEE VLQ IEER ARKN+D+ +SD IR DL GIAL
Sbjct: 480 -PTTYSEVLQQLREKALRRAKLTEEQVLQRIEERTVARKNRDYERSDAIRKDLATHGIAL 538
Query: 499 MDMGKETIWRPCV-LVEQEQEA 519
MD T WRP + L QEQ+A
Sbjct: 539 MDSPDGTSWRPAIPLAMQEQQA 560
>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/496 (64%), Positives = 383/496 (77%), Gaps = 7/496 (1%)
Query: 25 MTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M+++KELF P V GKVGMYVCGVTAYDLSH+GHAR V+FD+L RYL+HL +V YVRNF
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGFDVHYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TDVDDKII RAN+LGE+P+SLS RYC+E+L DM L CLPP+ +PRVSDHM QI DMI +
Sbjct: 61 TDVDDKIIARANELGEDPISLSKRYCEEFLHDMVYLHCLPPSVEPRVSDHMPQIIDMIER 120
Query: 145 IINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAK 204
I+ N AY ++GDV+F+V+K P YGRLSG++LE+NRAGERVAVDSRK+NPADFALWK+AK
Sbjct: 121 ILENGYAYRIDGDVYFSVDKLPEYGRLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAK 180
Query: 205 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD 264
GEP WDSPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+D
Sbjct: 181 EGEPFWDSPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACRD 240
Query: 265 SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 324
SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ YHPLALR FL+ HYRSP+NYS +Q
Sbjct: 241 SNISYWVHNGFVTIDSEKMSKSLGNFFTIRQVINLYHPLALRLFLLGTHYRSPVNYSDVQ 300
Query: 325 LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 384
L+SAS+ +FYIYQTL DCE LS + + I P + INK D MSDDL+T
Sbjct: 301 LESASERIFYIYQTLHDCENILSQHRVAFEKDAIPPDTINDINKFHDTLVTSMSDDLHTP 360
Query: 385 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 444
+L A D LK IN L+ K K +Q+ IES+ +E V+ L +LGL+PP Y+
Sbjct: 361 -VLLSALSDPLKIINDMLHTRKGK----KQIKRIESIAALEKMVRNALMVLGLMPP-TYN 414
Query: 445 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 504
E LQQL++KAL+RA+LTE+ +LQ IEER ARK+KD+ KSD IR DL GIALMD
Sbjct: 415 EALQQLREKALRRAKLTEDQILQKIEERTVARKDKDYEKSDAIRKDLAALGIALMDSPDG 474
Query: 505 TIWRPCV-LVEQEQEA 519
T WRP + L QEQ+
Sbjct: 475 TSWRPAIPLALQEQQV 490
>gi|449437168|ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/502 (63%), Positives = 387/502 (77%), Gaps = 7/502 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+M+++KE+F P V GKVGMYVCGVTAYDLSH+GHAR V+FD+LYRYL HL EV
Sbjct: 78 LWLHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHLGYEV 137
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN+LGE+PL+LS RYC+E+ DM L CLPP+ +P+VSDHM QI
Sbjct: 138 LYVRNFTDVDDKIIARANELGEDPLNLSRRYCEEFRRDMMYLHCLPPSVEPQVSDHMPQI 197
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI QI++N AY V+GDV+F V+K P YG+LSG++LE+NRAGERV+VDSRK+NPADFA
Sbjct: 198 IDMIKQILDNGYAYSVDGDVYFNVDKFPEYGQLSGRKLEDNRAGERVSVDSRKKNPADFA 257
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 258 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQS 317
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC+ SNVSYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 318 CAACRTSNVSYWVHNGFVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYRSPI 377
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS L L+SASD +FYIYQTL DC +S E I P+ + INK + F MS
Sbjct: 378 NYSDLLLESASDRIFYIYQTLDDCRTVISQEDESSFKGPIAPSLVEEINKFSNVFLTSMS 437
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD++T +L A D LK IN ++L ++ K+Q+ + ESL +E + VL ILGL+
Sbjct: 438 DDIHTPVVL-AALSDPLKIIN---DLLHTRKGKKQEFRM-ESLAALEKIIGNVLSILGLM 492
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P +YSE LQQLK+KAL RA++T + VLQ IEER AARKNK++ KSD IR DL GI+L
Sbjct: 493 -PASYSEALQQLKEKALTRAKMTNDQVLQKIEERNAARKNKEYEKSDSIRTDLAAVGISL 551
Query: 499 MDMGKETIWRPCV-LVEQEQEA 519
MD T WRP V L QE +A
Sbjct: 552 MDGPNGTTWRPTVPLALQEHQA 573
>gi|449517190|ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/502 (63%), Positives = 386/502 (76%), Gaps = 7/502 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+M+++KE+F P V GKVGMYVCGVTAYDLSH+GHAR V+FD+LYRYL HL EV
Sbjct: 78 LWLHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHLGYEV 137
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN+LGE+PL+LS RYC+E+ DM L CLPP+ +P+VSDHM QI
Sbjct: 138 LYVRNFTDVDDKIIARANELGEDPLNLSRRYCEEFRRDMMYLHCLPPSVEPQVSDHMPQI 197
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI QI++N AY V+GDV+F V+K P YG+LSG++LE+NRAGERV+VDSRK+NPADFA
Sbjct: 198 IDMIKQILDNGYAYCVDGDVYFNVDKFPEYGQLSGRKLEDNRAGERVSVDSRKKNPADFA 257
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 258 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQS 317
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CA C+ SNVSYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 318 CATCRTSNVSYWVHNGFVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYRSPI 377
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS L L+SASD +FYIYQTL DC +S E I P+ + INK + F MS
Sbjct: 378 NYSDLLLESASDRIFYIYQTLDDCRTVVSQEDESSFKGSIAPSLVEEINKFSNVFLTSMS 437
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD++T +L A D LK IN ++L ++ K+Q+ + ESL +E + VL ILGL+
Sbjct: 438 DDIHTPVVL-AALSDPLKIIN---DLLHTRKGKKQEFRM-ESLAALEKIIGNVLSILGLM 492
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P +YSE LQQLK+KAL RA++T + VLQ IEER AARKNK++ KSD IR DL GI+L
Sbjct: 493 -PASYSEALQQLKEKALTRAKMTNDQVLQKIEERNAARKNKEYEKSDSIRTDLAAVGISL 551
Query: 499 MDMGKETIWRPCV-LVEQEQEA 519
MD T WRP V L QE +A
Sbjct: 552 MDGPNGTTWRPTVPLALQEHQA 573
>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/479 (66%), Positives = 379/479 (79%), Gaps = 8/479 (1%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCGVTAYDLSH+GHAR VSFD+LYRYL HL+ EV YVRNFTDVDDKII RAN++GE+
Sbjct: 1 MYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHLEYEVNYVRNFTDVDDKIIARANEMGED 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFA 161
P++LS RYCQE+ VDM L CLPP+ +P VSDHM QI DMI QII+NDCAY VEGDV+F+
Sbjct: 61 PINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYRVEGDVYFS 120
Query: 162 VEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGW 221
V+K P YGRLSG+++E+NRAGERVAVDSRK+NPADFALWKAAK GEP WDSPWGPGRPGW
Sbjct: 121 VDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGW 180
Query: 222 HIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNE 281
HIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+ SN+SYW+HNG VT ++E
Sbjct: 181 HIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSE 240
Query: 282 KMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD 341
KMSKSLGNFFTIRQ+ + YHPLALR FLI HYRSP+NYS +QL+SASD VFYIYQTL D
Sbjct: 241 KMSKSLGNFFTIRQVIDIYHPLALRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHD 300
Query: 342 CEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 401
C+ A+ + K + P DCINK ++F MSDDL+T +L A D LK IN
Sbjct: 301 CQNAMDQ-DDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVL-AALSDPLKTIN-- 356
Query: 402 LNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELT 461
++L ++ K+Q+L L ESL +E +++VL ILGL+ P +YSE L QL++KALKR++LT
Sbjct: 357 -DLLHTRKGKKQELRL-ESLAALEKVIRDVLTILGLM-PASYSEALLQLREKALKRSKLT 413
Query: 462 EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEA 519
E+ +LQ IEER ARKNK++ KSD IR DL GIALMD T WRP + L QEQ A
Sbjct: 414 EDHILQKIEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQEQVA 472
>gi|356515262|ref|XP_003526320.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 561
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/494 (64%), Positives = 384/494 (77%), Gaps = 12/494 (2%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
++N+M++ KELF P V KVGMYVCGVTAYDLSH+GHAR V+FDLLYRY +HL +V Y
Sbjct: 69 LHNTMSKTKELFKPKVDSKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFQVCY 128
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII RA +LGE+P+SLS RYC+E+ DM L CL P+ +P+VS+HM QI D
Sbjct: 129 VRNFTDVDDKIIARAKELGEDPISLSRRYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIID 188
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
MI +I+NN AY+V+GDV+F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALW
Sbjct: 189 MIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDLEDNRAGERVAVDSRKKNPADFALW 248
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
K+AK GEP W+S WGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCA
Sbjct: 249 KSAKPGEPFWESRWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCA 308
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
AC+ S++S WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NY
Sbjct: 309 ACKKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQVIDIYHPLALRYFLMSAHYRSPINY 368
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAEDCINKLRDEFHARM 377
S +QL+SASD VFYIY+TL +CE L+ +H +T R I P D I+K D F M
Sbjct: 369 SNIQLESASDRVFYIYETLHECESFLN---QHDQTIRKDSIPPDTLDIIDKFHDVFLTSM 425
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
SDDL+T +L G D LK IN ++L ++ K+QQ IESL +E V++VL +LGL
Sbjct: 426 SDDLHTPVVLAG-MSDPLKSIN---DLLHTRKGKKQQFR-IESLSALEKSVRDVLTVLGL 480
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ P +Y EVLQQLK+KALKRA LTE+DVLQ IEERAAAR K+++KSD IR DL GI
Sbjct: 481 M-PASYFEVLQQLKEKALKRANLTEDDVLQKIEERAAARIQKEYAKSDAIRKDLAVVGIT 539
Query: 498 LMDMGKETIWRPCV 511
LMD T WRP +
Sbjct: 540 LMDSPNGTTWRPAI 553
>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/499 (64%), Positives = 383/499 (76%), Gaps = 34/499 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+MTQ KE+F PI PGK+GMYVCG+TAYD SH+GHARAAVSFDLLYRYL HL EV
Sbjct: 8 LTLYNTMTQLKEVFKPINPGKIGMYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLGYEV 67
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDK A GE PL LSNR+C+EYL+DM LQCL PT QPRVSDHME I
Sbjct: 68 HYVRNFTDVDDK----AKKCGEKPLDLSNRFCEEYLLDMTALQCLIPTRQPRVSDHMEHI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +II N C Y V GDVFF+V+KSP+YG+LSGQRL++ +AG+RVAVDSRKRNPADFA
Sbjct: 124 IKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LW AAK+GEPSW+SPWGPGRPGWHIECSAMSAHYLS +FDIHGGG DL FPHHENEIAQ+
Sbjct: 184 LWNAAKSGEPSWESPWGPGRPGWHIECSAMSAHYLSPRFDIHGGGADLKFPHHENEIAQT 243
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC+DS V+YW+HNGHVTNNN KM KSL NFFTIR+IT +YHPLALRHFL+SA YRSPL
Sbjct: 244 CAACEDSGVNYWLHNGHVTNNNVKMGKSLDNFFTIREITAKYHPLALRHFLMSAQYRSPL 303
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-----GKTARINPAAEDCINKLRDEF 373
NYSV QL+S+SDA++ YQTL+D LSP++E GKT + A E
Sbjct: 304 NYSVSQLESSSDALYCAYQTLEDLVKYLSPYREEMSGDVGKTQQTAEAKE---------- 353
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ ++ALKFIN S++ LKK Q K+Q++SLI SL ++E V+EVL
Sbjct: 354 -------------MIKKVKNALKFINVSISKLKKIQ-KKQRMSLIVSLVEVEKAVREVLD 399
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGLL +Y E L+++K KAL RA + EE+VL+ I+ER ARKNKDF +SDQIR L
Sbjct: 400 VLGLLTTLSYDEFLKEMKQKALTRAGIGEEEVLRRIDERKLARKNKDFKRSDQIRELLAA 459
Query: 494 KGIALMDM-GKETIWRPCV 511
KGIAL D+ GK+T+WRPC
Sbjct: 460 KGIALEDIPGKDTVWRPCT 478
>gi|356509902|ref|XP_003523681.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 557
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/491 (64%), Positives = 379/491 (77%), Gaps = 8/491 (1%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
++N+M++ KELF P V KVGMYVCGVTAYDLSH+GHAR V+FDLLYRY +HL EV Y
Sbjct: 67 LHNTMSRTKELFKPKVESKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFEVCY 126
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII RA +LGE+P+SLS RYC+E+ DM L CL P+ +P+VS+HM QI D
Sbjct: 127 VRNFTDVDDKIIARAKELGEDPISLSWRYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIID 186
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
MI +I+NN AY+V+GDV+F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALW
Sbjct: 187 MIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDLEDNRAGERVAVDSRKKNPADFALW 246
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
K+AK GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCA
Sbjct: 247 KSAKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCA 306
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
AC+ S++S WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NY
Sbjct: 307 ACKKSDISIWMHNGFVTIDSVKMSKSLGNFFTIRQVIDVYHPLALRYFLMSAHYRSPINY 366
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDD 380
S +QL+SASD VFYIY+TL +CE L+ Q + P D I+K D F MSDD
Sbjct: 367 SNIQLESASDRVFYIYETLHECESFLN--QHDQRKDSTPPDTLDIIDKFHDVFLTSMSDD 424
Query: 381 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 440
L+T +L G D LK IN ++L ++ K+QQ IESL +E V++VL +LGL+ P
Sbjct: 425 LHTPVVLAG-MSDPLKSIN---DLLHARKGKKQQFR-IESLSALEKSVRDVLTVLGLM-P 478
Query: 441 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 500
+YSEVLQQLK KALKRA TEE+VLQ IEERA AR K+++KSD IR DL GI LMD
Sbjct: 479 ASYSEVLQQLKVKALKRANFTEEEVLQKIEERATARMQKEYAKSDAIRKDLAVLGITLMD 538
Query: 501 MGKETIWRPCV 511
T WRP +
Sbjct: 539 SPNGTTWRPAI 549
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/500 (62%), Positives = 385/500 (77%), Gaps = 6/500 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+M+++KE+F P V GKVGMYVCGVTAYD SH+GHARA V+FD+LYRYL++L +V
Sbjct: 84 LWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYLGYDV 143
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN++GENP+SLS R+C E+ DM+ L CLPP+ +PRVSDHM QI
Sbjct: 144 CYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVEPRVSDHMPQI 203
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI QI++N AY V+GDV+F+VEK P+YGRLSG++LE+NRAGERVA+DSRKRNPADFA
Sbjct: 204 IDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVAIDSRKRNPADFA 263
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMS+ YL FDIHGGG+DL+FPHHENEI QS
Sbjct: 264 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDLMFPHHENEIVQS 323
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC +SN+ YW+HNG VT N+EKMSKSLGNFFTIRQ+ E YHPLALR FL+ HYRSP+
Sbjct: 324 CAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIELYHPLALRLFLMGTHYRSPI 383
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS + L+SAS+ +FYIYQTLQD + LS + I CIN L++ F MS
Sbjct: 384 NYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSIPQDIVSCINDLQNSFVISMS 443
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL+T +L A D LK IN ++L ++ K+++L +ESL +E +K VL LGL+
Sbjct: 444 DDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKRELR-VESLAALEKTIKHVLTALGLM 498
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P +YSE L QL++KALKR + +E +V Q IEER ARKNK++ KSD IR +L GIAL
Sbjct: 499 -PSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKNKEYEKSDAIRKELAAVGIAL 557
Query: 499 MDMGKETIWRPCVLVEQEQE 518
MD + T WRP V +QE
Sbjct: 558 MDSPEGTTWRPVVPTALQQE 577
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/503 (62%), Positives = 389/503 (77%), Gaps = 12/503 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+M+++KE+F P V GKVGMYVCGVTAYD SH+GHARA V+FD+LYRYL++L +V
Sbjct: 84 LWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYLGYDV 143
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII RAN++GENP+SLS R+C E+ DM+ L CLPP+ +PRVSDHM QI
Sbjct: 144 CYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVEPRVSDHMPQI 203
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI QI++N AY V+GDV+F+VEK P+YGRLSG++LE+NRAGERVA+DSRKRNPADFA
Sbjct: 204 IDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVAIDSRKRNPADFA 263
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWGPGRPGWHIECSAMS+ YL FDIHGGG+DL+FPHHENEI QS
Sbjct: 264 LWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDLMFPHHENEIVQS 323
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC +SN+ YW+HNG VT N+EKMSKSLGNFFTIRQ+ E YHPLALR FL+ HYRSP+
Sbjct: 324 CAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIELYHPLALRLFLMGTHYRSPI 383
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED---CINKLRDEFHA 375
NYS + L+SAS+ +FYIYQTLQD + LS E+G+ + +D CIN L++ F
Sbjct: 384 NYSDVLLESASERIFYIYQTLQDSQALLS---EYGRANLKDSIPQDIVSCINDLQNSFVI 440
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDDL+T +L A D LK IN ++L ++ K+++L +ESL +E +K VL L
Sbjct: 441 SMSDDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKRELR-VESLAALEKTIKHVLTAL 495
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL+ P +YSE L QL++KALKR + +E +V Q IEER ARK K++ KSD IR +L G
Sbjct: 496 GLM-PSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKYKEYEKSDAIRKELAAVG 554
Query: 496 IALMDMGKETIWRPCVLVEQEQE 518
IALMD + T WRP V +QE
Sbjct: 555 IALMDSPEGTTWRPVVPTALQQE 577
>gi|42569504|ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 563
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/493 (62%), Positives = 380/493 (77%), Gaps = 6/493 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+M+++KELF P V GKVGMYVCGVTAYDLSH+GHAR V+FD+L RYL+HL EV
Sbjct: 65 LWLHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEV 124
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRNFTDVDDKII RA +L E+P+SLS R+C+E+ DM LQCL P+ QPRVSDH+ QI
Sbjct: 125 SYVRNFTDVDDKIIARAKELEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQI 184
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I QI++N AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFA
Sbjct: 185 IDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFA 244
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 245 LWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQS 304
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 305 CAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPI 364
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS L+SAS+ +FYIYQTL DCE AL + + IN R EF A MS
Sbjct: 365 NYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMS 424
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL T L A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+
Sbjct: 425 DDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARRE----ESLKALETTIRDVLTILGLM 479
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P +YSEVL+QLK+KALKRA L EEDVLQ ++ER ARKNK++ +SD IR DL + GIAL
Sbjct: 480 PT-SYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIAL 538
Query: 499 MDMGKETIWRPCV 511
MD + T WRP +
Sbjct: 539 MDSPEGTTWRPAI 551
>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
Length = 569
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/501 (62%), Positives = 385/501 (76%), Gaps = 12/501 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPG-KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L +YN+ +++KELF P VPG +VGMYVCGVT YD SH+GHARA V+FD+LYRYL +L +
Sbjct: 72 LHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYLDHK 131
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTD+DDKII RAN LGE+P SLS RY ++L DMA+L CLPP+ +PRVSDH++Q
Sbjct: 132 VRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQ 191
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +MI QII+NDCAY + GDV+F+VE P YG LSG++L++NRAGERVAVD RK+NPADF
Sbjct: 192 IINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADF 251
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQ
Sbjct: 252 ALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQ 311
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AAC DS+++YW+HNG V N++KMSKSLGNF TIR++TE YHPLALR FL+ HYRSP
Sbjct: 312 SRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHYRSP 371
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHAR 376
+NY++ QL+ ASD ++Y YQTLQDCE + Q + G +N +CI KL DEF
Sbjct: 372 INYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPVN--TTNCIQKLHDEFETS 429
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E +++ VL +L
Sbjct: 430 MSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-----LESLSAMEEKIRMVLSVL 483
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL P +Y E LQQL++KAL+RA +TEE VLQ IEER +ARK K + KSD+IR +L G
Sbjct: 484 GLL-PSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVG 542
Query: 496 IALMDMGKETIWRPCVLVEQE 516
IALMD T WRP V + ++
Sbjct: 543 IALMDGPDGTTWRPSVPLSEQ 563
>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
Length = 569
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 312/501 (62%), Positives = 385/501 (76%), Gaps = 12/501 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPG-KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L +YN+ +++KELF P VPG +VGMYVCGVT YD SH+GHARA V+FD+LYRYL +L +
Sbjct: 72 LHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYLDHK 131
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTD+DDKII RAN LGE+P SLS RY ++L DMA+L CLPP+ +PRVSDH++Q
Sbjct: 132 VRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQ 191
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +MI QII+NDCAY + GDV+F+VE P YG LSG++L++NRAGERVAVD RK+NPADF
Sbjct: 192 IINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADF 251
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQ
Sbjct: 252 ALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQ 311
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AAC DS+++YW+HNG V N++KMSKSLGNF TIR++TE YHPLALR FL+ HYRSP
Sbjct: 312 SRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHYRSP 371
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHAR 376
+NY++ QL+ ASD ++Y YQTLQDCE + Q + G +N +CI KL DEF
Sbjct: 372 INYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPVN--TTNCIQKLHDEFETS 429
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E +++ VL +L
Sbjct: 430 MSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-----LESLSAMEEKIRMVLSVL 483
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL P +Y E LQQL++KAL+RA +TEE VLQ IEER +ARK K + KSD+IR +L G
Sbjct: 484 GLL-PSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVG 542
Query: 496 IALMDMGKETIWRPCVLVEQE 516
IALMD T WRP V + ++
Sbjct: 543 IALMDGPDGTTWRPSVPLSEQ 563
>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 493
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 303/487 (62%), Positives = 375/487 (77%), Gaps = 6/487 (1%)
Query: 25 MTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M+++KELF P V GKVGMYVCGVTAYDLSH+GHAR V+FD+L RYL+HL EV+YVRNF
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEVSYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TDVDDKII RA +L E+P+SLS R+C+E+ DM LQCL P+ QPRVSDH+ QI D+I Q
Sbjct: 61 TDVDDKIIARAKELEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLIKQ 120
Query: 145 IINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAK 204
I++N AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFALWKAAK
Sbjct: 121 ILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAK 180
Query: 205 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD 264
GEP W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC
Sbjct: 181 EGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDS 240
Query: 265 SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 324
SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+NYS
Sbjct: 241 SNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDFL 300
Query: 325 LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 384
L+SAS+ +FYIYQTL DCE AL + + IN R EF A MSDDL T
Sbjct: 301 LESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTP 360
Query: 385 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 444
+ A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+P +YS
Sbjct: 361 -VTLAAMSEPLKTINDLIHTRKGKKQARRE----ESLKALETTIRDVLTILGLMPT-SYS 414
Query: 445 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 504
EVL+QLK+KALKRA L EEDVLQ ++ER ARKNK++ +SD IR DL + GIALMD +
Sbjct: 415 EVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEG 474
Query: 505 TIWRPCV 511
T WRP +
Sbjct: 475 TTWRPAI 481
>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 306/504 (60%), Positives = 380/504 (75%), Gaps = 7/504 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+M+++KELF P + GKVGMYVCGVTAYDLSH+GHAR V+FD+L RYL+HL EV
Sbjct: 65 LWLHNTMSRKKELFKPKIEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEV 124
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRNFTDVDDKII RAN+LGE+P+SLS R+C+E+ DM LQCL P+ QP VSDH+ QI
Sbjct: 125 SYVRNFTDVDDKIIARANELGEDPISLSRRFCEEFKRDMEQLQCLDPSVQPLVSDHIPQI 184
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I QI++N AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFA
Sbjct: 185 VDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFA 244
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQS
Sbjct: 245 LWKTAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQS 304
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
CAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+
Sbjct: 305 CAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPI 364
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS L+SAS+ +FYIYQTL DCE L + IN EF A MS
Sbjct: 365 NYSDFLLESASERIFYIYQTLHDCESLLGEKDSTFGNDSVPSDTLTTINTFHSEFVASMS 424
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDL T + A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+
Sbjct: 425 DDLLTP-VTLAAMSEPLKTINDIIHTRKGKKQARRE----ESLKALETTIRDVLTILGLM 479
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P +YSEVL+QLK+KALKRA L EEDVLQ ++ER ARKNK++ +SD IR DL GIAL
Sbjct: 480 PT-SYSEVLEQLKEKALKRAGLEEEDVLQRVQERTDARKNKEYERSDAIRKDLASVGIAL 538
Query: 499 MDMGKETIWRPCV-LVEQEQEAPP 521
MD + T WRP + L QE P
Sbjct: 539 MDSPEGTTWRPAIPLALQEPVTTP 562
>gi|414873768|tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]
Length = 564
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 312/522 (59%), Positives = 389/522 (74%), Gaps = 18/522 (3%)
Query: 1 MEASKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVPGK-VGMYVCGVTAYDLSHLGHAR 59
AS G AA L++YN+ +++KE F P +PG+ VGMYVCGVT YD SH+GHAR
Sbjct: 50 FSASASNG--AATDRTRELRLYNTKSRKKEQFRPRIPGREVGMYVCGVTPYDDSHIGHAR 107
Query: 60 AAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMAD 119
A V+FD+LYRYL +L EV YVRNFTD+DDKII RAN LGE+P SLS R+ ++L DMA+
Sbjct: 108 AYVAFDVLYRYLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMAN 167
Query: 120 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 179
LQCLPP+ +PRVSDH+++I +MI QI++N CAYVV GDV+F+V+ P YG LSG++L++N
Sbjct: 168 LQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKLDDN 227
Query: 180 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 239
RAGERVAVD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL FDI
Sbjct: 228 RAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDI 287
Query: 240 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 299
HGGG DLIFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++ E
Sbjct: 288 HGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEM 347
Query: 300 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 359
YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE +H ++ N
Sbjct: 348 YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCE----EICQHQQSNTGN 403
Query: 360 PAAEDCIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQL 415
P + +N KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 404 PLPANTLNYIQKLHDEFETSMSDDLHTS-VALAAMSEPLKVMNDLLHTRKGKKQDKR--- 459
Query: 416 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 475
+ESL +E +++ VL +LGLL P +Y E LQQL+DKAL+RA +TEE V+Q IEER AA
Sbjct: 460 --LESLSALEEKIRVVLSVLGLL-PSSYHEALQQLRDKALRRASITEELVVQKIEERTAA 516
Query: 476 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQ 517
RK K + KSD+IR +L GIALMD T WRP + + +E+
Sbjct: 517 RKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSLPLPEEE 558
>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
Length = 571
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 307/502 (61%), Positives = 379/502 (75%), Gaps = 14/502 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPG-KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L +YN+ +++KE F P PG +VGMYVCGVT YD SH+GHARA V+FD+LYRYL +L E
Sbjct: 74 LHLYNTKSRKKEQFRPRDPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYLDYE 133
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTD+DDKII RAN LGE+P SLS R+ ++L DMA+LQCLPP+ +PRVSDH+ +
Sbjct: 134 VRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMANLQCLPPSVEPRVSDHIHE 193
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +MI QI++N CAYVV GDV+F+VE P YG LSG++L++NRAGERVAVD RKRNPADF
Sbjct: 194 IINMIKQILDNSCAYVVGGDVYFSVENFPEYGELSGRKLDDNRAGERVAVDERKRNPADF 253
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQ
Sbjct: 254 ALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQ 313
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AAC DS ++YW+HNG V N++KMSKSLGNF TIR++ E YHPLALR FL+ HYRSP
Sbjct: 314 SRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFLLGTHYRSP 373
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA--RINPAAEDCINKLRDEFHA 375
+NY++ QL+ ASD ++Y YQTL+DCE + Q+ G + P + I KL DEF
Sbjct: 374 INYTIEQLNVASDRLYYTYQTLRDCEESC---QQQGSNTGNSLPPNTLNYIQKLHDEFET 430
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRI 434
MSDDL+TS + A + LK +N L+ K KKQ K+ +E+L ++ +++ VL +
Sbjct: 431 SMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQDKR-----LEALSALDEKIRVVLSV 484
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LGLL P +Y E LQQL+DKAL+RA +TEE VLQ IEER AARK K + KSD+IR +L
Sbjct: 485 LGLL-PSSYHEALQQLRDKALRRASITEELVLQKIEERTAARKAKQYEKSDEIRKELAAV 543
Query: 495 GIALMDMGKETIWRPCVLVEQE 516
GIALMD T WRP + + +E
Sbjct: 544 GIALMDGPNGTTWRPSLPLSEE 565
>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
Length = 602
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 308/503 (61%), Positives = 388/503 (77%), Gaps = 13/503 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N+M+++KELF PGKVGMYVCGVTAYD SH+GHAR V+FD+LYRYL+ L EV
Sbjct: 105 LYIFNTMSKKKELFKAREPGKVGMYVCGVTAYDYSHIGHARVYVTFDILYRYLQRLGYEV 164
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII RANDLGENPLSLSNR+C+E+ VDMA+L CLPP+ +PRV+DH+ QI
Sbjct: 165 KYVRNFTDIDDKIISRANDLGENPLSLSNRFCKEFQVDMAELNCLPPSVEPRVTDHINQI 224
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI QI+ N AYVVE GDV+F+V+K P YG LSG++L++NRAGER+AVDSRK+NPADF
Sbjct: 225 IEMIQQILRNGYAYVVENGDVYFSVDKYPKYGCLSGRKLDDNRAGERIAVDSRKQNPADF 284
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK EP WDSPWGPGRPGWHIECSAMSA +L FDIHGGG+DLIFPHHENEIAQ
Sbjct: 285 ALWKSAKPSEPFWDSPWGPGRPGWHIECSAMSAAHLGYCFDIHGGGVDLIFPHHENEIAQ 344
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SCA+C DSNV YW+HNG VT + EKMSKSLGNFFTIR++ E YHPLALR FL HYRS
Sbjct: 345 SCASCNDSNVPYWIHNGFVTVDAEKMSKSLGNFFTIREVLESYHPLALRLFLSGTHYRSQ 404
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFH 374
LNYS QL++AS+ +FYIYQTL+DCE LS H + + P ED IN + + F
Sbjct: 405 LNYSKSQLENASERLFYIYQTLKDCEECLS---GHVRQSIGQPIPEDIQKRINNIHNAFS 461
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
+ MS+DL+ + L A + LK +N +++ +Q ++Q+L + E L +E + +++L
Sbjct: 462 SSMSNDLHIAMALD-ALSEPLKIMN---DLMFTRQGRKQKLRM-EFLDSLEVKTRDLLSD 516
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LGL+ P +YSEVL QLK KAL+RA +TE++VLQ IE+RA AR K++S+SD+IR L
Sbjct: 517 LGLMSP-SYSEVLLQLKSKALRRAGITEDEVLQAIEKRADARAAKNYSESDRIRRKLAVL 575
Query: 495 GIALMDMGKETIWRPCVLVEQEQ 517
GIALMD T WRP + +E+E+
Sbjct: 576 GIALMDEPSGTTWRPAIPLEEEE 598
>gi|357159997|ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 567
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 303/503 (60%), Positives = 381/503 (75%), Gaps = 10/503 (1%)
Query: 11 AAPKMDLTLKIYNSMTQQKELFTPIVPG-KVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
AA + L +YN+ ++++ELF P PG +VGMYVCGVT YD SH+GHARA V+FD+L+R
Sbjct: 61 AAAERARDLHLYNTKSRRRELFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFR 120
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL +L EV YVRNFTD+DDKII RAN LGE+P SLS RY +L DMA LQCLPP+ +P
Sbjct: 121 YLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDAFLSDMAHLQCLPPSVEP 180
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS 189
RVSDH++QI +MI QI++N CAYVV GDV+F+V+ P YG LSG++L++NRAGER+AVD
Sbjct: 181 RVSDHIDQIVNMIKQILDNGCAYVVSGDVYFSVDNFPEYGMLSGRKLDDNRAGERIAVDE 240
Query: 190 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFP 249
RK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL + FDIHGGG DLIFP
Sbjct: 241 RKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLIFP 300
Query: 250 HHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
HHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++ E+YHPLALR FL
Sbjct: 301 HHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEQYHPLALRMFL 360
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL 369
+ HYRSP+NY+V QL+ ASD ++Y YQTL+D E + Q + + A + CI KL
Sbjct: 361 LGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQKDQINSEDA-LPATTTHCIEKL 419
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEV 428
++EF MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E ++
Sbjct: 420 QNEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-----LESLFALEEKI 473
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
+ VL +LGL+ P +Y E LQQL++KAL+RA +TE+ VLQ IEER +ARK K + KSD+IR
Sbjct: 474 RTVLSVLGLM-PSSYYEALQQLREKALQRASITEDQVLQKIEERTSARKAKQYEKSDEIR 532
Query: 489 ADLTRKGIALMDMGKETIWRPCV 511
+L GIALMD T WRP V
Sbjct: 533 KELAALGIALMDGPDGTTWRPSV 555
>gi|212723404|ref|NP_001131561.1| uncharacterized protein LOC100192902 [Zea mays]
gi|194691858|gb|ACF80013.1| unknown [Zea mays]
gi|414590163|tpg|DAA40734.1| TPA: hypothetical protein ZEAMMB73_139992 [Zea mays]
Length = 573
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/501 (60%), Positives = 379/501 (75%), Gaps = 12/501 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPG-KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L +YN+ +++KE F P PG +VGMYVCG+T YD SH+GHARA V+FD++YRYL +L E
Sbjct: 76 LHLYNTKSRKKEQFRPRDPGGEVGMYVCGITPYDDSHIGHARAYVAFDVVYRYLRYLDYE 135
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTD+DDKII RAN LGE+P +LS R+ ++L+DMA+LQCLPP+ +PRVSDH+++
Sbjct: 136 VRYVRNFTDIDDKIIARANQLGEDPFNLSKRFSDDFLLDMANLQCLPPSVEPRVSDHIDE 195
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +MI QI++N CAYVV GDV+F+V+ P+YG LSG++L++NRAGERV+VD RKRNPADF
Sbjct: 196 IINMIKQILDNSCAYVVGGDVYFSVDSFPDYGELSGRKLDDNRAGERVSVDERKRNPADF 255
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQ
Sbjct: 256 ALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQ 315
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AAC DS ++YW+HNG V N++KMSKSLGNF TIR++ E YHPLALR FL+ HYRSP
Sbjct: 316 SRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFLLGTHYRSP 375
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
+NY++ QL+ SD ++Y YQTL DCE Q+ T PA + I KL +EF
Sbjct: 376 INYTIEQLNVTSDRLYYTYQTLLDCEEICQ--QQQSNTGNSLPANTLNYIQKLHEEFETS 433
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E +++ VL +L
Sbjct: 434 MSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQDKR-----LESLSALEEKIRVVLSVL 487
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL P +Y E LQQL+DKAL+RA +TEE V+Q IEER AARK K + KSD+IR +L G
Sbjct: 488 GLL-PSSYHEALQQLRDKALRRASITEELVVQKIEERTAARKAKQYEKSDEIRKELAAIG 546
Query: 496 IALMDMGKETIWRPCVLVEQE 516
IALMD T WRP + + +E
Sbjct: 547 IALMDGPDGTTWRPSLPILEE 567
>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 291/495 (58%), Positives = 378/495 (76%), Gaps = 11/495 (2%)
Query: 25 MTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M +QKE+F PIVPGKV MYVCGVT YD SH+GHAR V+FD+L+RYL+ + +VTYVRNF
Sbjct: 1 MKKQKEVFQPIVPGKVSMYVCGVTTYDYSHIGHARVYVAFDVLFRYLKSVGYDVTYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TD+DDKII+RAN++GE+PL+LS R+C E+ VDM L+CLPP +PRVSDH+ QI MI+Q
Sbjct: 61 TDIDDKIIKRANEVGEDPLNLSRRFCDEFQVDMELLRCLPPNVEPRVSDHIPQIIKMISQ 120
Query: 145 IINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAA 203
II N YV+EG DV+F V+ P YG LSG++ E NRAGERV VD+RKRNPADFALWK+A
Sbjct: 121 IIENKNGYVMEGGDVYFEVDTLPTYGCLSGRKQEENRAGERVLVDNRKRNPADFALWKSA 180
Query: 204 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 263
K GEP+WDSPWGPGRPGWHIECSAMSA +L KFDIHGGG+DLIFPHHENEIAQSCAAC
Sbjct: 181 KPGEPAWDSPWGPGRPGWHIECSAMSAEHLGHKFDIHGGGMDLIFPHHENEIAQSCAACA 240
Query: 264 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 323
DS V YW+HNG VT +NEKMSKS+GNFFTIR++ E YHPLALR FL+ HYR+P+NYS
Sbjct: 241 DSRVGYWLHNGFVTVDNEKMSKSVGNFFTIREVLELYHPLALRWFLLGTHYRAPVNYSKR 300
Query: 324 QLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDL 381
QL+ ASD VFYI+QTL DCE LS Q+ K A NP+ E + + +++ F M+DDL
Sbjct: 301 QLEVASDRVFYIFQTLVDCEQILS--QQVDKVAACNPSKEAIELVKSIKNTFRTSMADDL 358
Query: 382 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 441
NT ++ +F ++ KF+N ++ K ++ K + + SL+ + E++EV+ +LG P
Sbjct: 359 NTP-VVVASFSESFKFMNDLMHTRKGRKDKTR----LVSLQLLITEIQEVMNVLGFQIP- 412
Query: 442 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 501
+YS+VL +++ ALKRA ++ D+ ++ERA+AR+ KD+++SDQIR +L GI LMD
Sbjct: 413 SYSKVLDEIRALALKRAGMSMNDLAARLQERASAREAKDYARSDQIRLELAAAGIGLMDG 472
Query: 502 GKETIWRPCVLVEQE 516
G T+WRP V+ E++
Sbjct: 473 GDGTLWRPIVVAEEQ 487
>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 305/504 (60%), Positives = 376/504 (74%), Gaps = 12/504 (2%)
Query: 11 AAPKMDLTLKIYNSMTQQKELFTPIVPG-KVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
AAP+ + +YN+ ++++E F P PG +VGMYVCGVT YD SH+GHARA V+FD+L+R
Sbjct: 66 AAPEKARDMHLYNTRSRRREPFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFR 125
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL +L EV YVRNFTD+DDKII RAN LGE+P SLS RY ++L DMA LQCLPP+ +P
Sbjct: 126 YLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMAHLQCLPPSVEP 185
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS 189
RVSDH++QI MI QII+N CAYVV GDV+F+V+ P Y +LSG++L++NRAGERVAVD
Sbjct: 186 RVSDHIDQIVTMIKQIIDNGCAYVVSGDVYFSVDNFPEYRKLSGRKLDDNRAGERVAVDE 245
Query: 190 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFP 249
RK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL + FDIHGGG DLIFP
Sbjct: 246 RKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLIFP 305
Query: 250 HHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
HHENEIAQS AAC DS+++YW+HNG V N +KMSKSLGNF TIR++ E YHPLALR FL
Sbjct: 306 HHENEIAQSRAACCDSSINYWVHNGFVNVNGQKMSKSLGNFITIRKVIELYHPLALRMFL 365
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-AAEDCINK 368
+ HYRSP+NY+V QL+ ASD ++Y YQTL+D E + Q+ + P CI K
Sbjct: 366 LGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQ--QDQSSSGDSLPFTTTHCIEK 423
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENE 427
L ++F MSDDL+TS + A + LK +N L+ K KKQ K+ +ESL +E +
Sbjct: 424 LHEDFETSMSDDLHTS-VALAAVSEPLKVMNDLLHTRKGKKQEKR-----LESLAALEEK 477
Query: 428 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
V+ VL +LGL+ P +Y E LQQL+ KAL+RA +TEE VLQ IEER AARK K F +SD+I
Sbjct: 478 VRMVLSVLGLM-PSSYHEALQQLRGKALRRACVTEEQVLQKIEERTAARKAKQFGRSDEI 536
Query: 488 RADLTRKGIALMDMGKETIWRPCV 511
R +L GIALMD T WRP V
Sbjct: 537 RDELAALGIALMDGPDGTAWRPSV 560
>gi|357466121|ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatula]
gi|355492393|gb|AES73596.1| Cysteinyl tRNA synthetase [Medicago truncatula]
Length = 608
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 311/536 (58%), Positives = 379/536 (70%), Gaps = 45/536 (8%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
++N+M+++KELF P V KVGMYVCGVTAYDLSH+GHAR V+FDLLYRY +HL +V Y
Sbjct: 78 LHNTMSKKKELFKPKVEKKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKHLGFQVCY 137
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII R+ +LGE+P+SLS RYC+E+ DM L CLP T +P+VS+HM QI +
Sbjct: 138 VRNFTDVDDKIIARSKELGEDPISLSRRYCEEFCQDMVTLNCLPATVEPKVSEHMPQIIE 197
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
MI +I+NN AY V+GD++F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALW
Sbjct: 198 MIEKILNNGYAYDVDGDIYFNVEKFPEYGKLSSRGLEDNRAGERVAVDSRKKNPADFALW 257
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
K+ K GEP W+SPWGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCA
Sbjct: 258 KSTKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCA 317
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
AC S++S WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NY
Sbjct: 318 ACSKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQVVDVYHPLALRYFLMSAHYRSPMNY 377
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAEDCINKLRDEFHARM 377
S + L+SASD VFYIY+TL +CE L ++H +T R + P I D F M
Sbjct: 378 SNIHLESASDRVFYIYETLHECESFL---KQHDQTVRKDSVPPDTLSIIGNFYDVFRTSM 434
Query: 378 SDDLNTSHILTGAFQDALKFINSSL-------------------------------NM-- 404
SDDL+T L G D LK IN L NM
Sbjct: 435 SDDLHTPVALAG-MSDPLKLINDLLHTRKWISGRARHHSIKNTIIREKIVVHVILQNMKD 493
Query: 405 --LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 462
L+ K+QQ IESL ++ + +VL +LGL+ P +Y EVLQQLK+KAL RA LTE
Sbjct: 494 SRLRWFGGKKQQFR-IESLAALKKSIGDVLTVLGLM-PSSYYEVLQQLKEKALNRANLTE 551
Query: 463 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQ 517
+++L+ IEER AAR K+++KSD IR L GIALMD T WRP + L QEQ
Sbjct: 552 DEILKKIEERDAARIQKEYAKSDSIRKGLAVLGIALMDSPNGTTWRPTIPLPLQEQ 607
>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
Length = 528
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 299/514 (58%), Positives = 369/514 (71%), Gaps = 23/514 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++NSMT++KELF P+V GKV MYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 11 LELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYEV 70
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE SLS+R+ E+L+DMA LQCLPPT +PRV+DH+E I
Sbjct: 71 EYVRNFTDIDDKIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCEPRVTDHIEHI 130
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++IT+I+ N AY +EGDV+F+V+ P Y LSG++L++N AG RVAVD+RKRNPADFA
Sbjct: 131 IELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDTRKRNPADFA 190
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 191 LWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 250
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG V +++KMSKS NFFTIR I + YHP+ALR FL+ HYR +
Sbjct: 251 RAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFFLMRTHYRGDV 310
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ ASD V+YIYQTL DCE LS ++ + + +D +NK EF M+
Sbjct: 311 NHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISVPVPVEEQDMVNKHHSEFLESMA 370
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL----------------------S 416
DDL T+ +L G F D LK INS+LN KK Q K +Q
Sbjct: 371 DDLRTTDVLDG-FTDLLKAINSNLNDFKKLQQKLEQQKKKQQQQKQQKQKQQQAQKQPEE 429
Query: 417 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 476
I+++ +E E+K + ILGL+PP + +E L+QLKDKALKRA LTEE + + IE+R AAR
Sbjct: 430 YIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKALKRAGLTEELLQEQIEQRTAAR 489
Query: 477 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
KNK F SDQIR L KGIALMD T+WRPC
Sbjct: 490 KNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPC 523
>gi|15228880|ref|NP_191189.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 489
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 306/501 (61%), Positives = 372/501 (74%), Gaps = 58/501 (11%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
K DLTL YN+MTQ KE++ P+ PGK+G+YVCG+TAYD SH+GHARAAVSFDLLYRYL H
Sbjct: 8 KPDLTL--YNTMTQLKEVYKPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRH 65
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
L +VTYVRNFTDVDDK A + GE PL LSNR+C+EYL+DMA LQCL PT+QPRVSD
Sbjct: 66 LGYQVTYVRNFTDVDDK----AKNCGEKPLDLSNRFCEEYLLDMAALQCLLPTHQPRVSD 121
Query: 134 HMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
HMEQI MI +II N C Y V GDVFF+V+KSP+YG+LSGQRL++ +AG+RVAVDSRKRN
Sbjct: 122 HMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRN 181
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
PADFAL KAAK+GEPSW+SPWG GRPGWHIE FDIHGGG DL FPHHEN
Sbjct: 182 PADFALRKAAKSGEPSWESPWGHGRPGWHIE------------FDIHGGGADLKFPHHEN 229
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+CAAC+DS V+YW+HNGHVTNNN KM KSL NFFTIRQI YHPLALRHFL+SA
Sbjct: 230 EIAQTCAACEDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQIAANYHPLALRHFLMSAQ 289
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-----GKTARINPAAEDCINK 368
YRSPLNYSV QL+S+SDA++ +LSP++E GKT + + A++ I K
Sbjct: 290 YRSPLNYSVSQLESSSDALY-----------SLSPYREEMSGDVGKTQQ-SAEAKEMIKK 337
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
++ +ALKFIN S++ LKK Q K+Q++SL+ SL ++E V
Sbjct: 338 VK----------------------NALKFINVSISKLKKMQ-KKQRMSLVVSLVEVEKAV 374
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
+EVL +LGLL +Y E+L+ +K KAL RA + EE+VLQ IEER ARK+KDF +SD+IR
Sbjct: 375 REVLDVLGLLTTLSYGELLKDMKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIR 434
Query: 489 ADLTRKGIALMDMGKETIWRP 509
L KGI L D+ +T+WRP
Sbjct: 435 ELLAFKGIFLEDVPGDTVWRP 455
>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
gi|413945620|gb|AFW78269.1| cysteinyl-tRNA synthetase [Zea mays]
Length = 556
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 300/529 (56%), Positives = 373/529 (70%), Gaps = 22/529 (4%)
Query: 4 SKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVS 63
S + TVA L ++NS+T+++E F P V GKVGMYVCGVT YD SH+GHARA V+
Sbjct: 18 SSPSATVAQATALPQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVA 77
Query: 64 FDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCL 123
FD+LYRYL+ L EV YVRNFTD+DDKII+RAN+ GE SLS+R+ E+L+DM +LQCL
Sbjct: 78 FDVLYRYLKFLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSRFINEFLLDMTELQCL 137
Query: 124 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 183
PPT +PRV++H+E I ++IT+I+ ND AY +EGDV+F+VE P Y LSG++ + N+AG
Sbjct: 138 PPTCEPRVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGA 197
Query: 184 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 243
RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG
Sbjct: 198 RVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGG 257
Query: 244 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
DLIFPHHENE+AQS AA +S V WMHNG V +++KM+KS NFFTIR IT YHPL
Sbjct: 258 KDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITALYHPL 317
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
ALR FL+ HYRS +N+S L+ ASD V+YI+QTL DCE L+ ++E G + + +
Sbjct: 318 ALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQ 377
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS------- 416
+ I+K EF MS+DL T+ +L F + LK INSSLN LKK Q K +Q
Sbjct: 378 NLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQK 437
Query: 417 ---------------LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELT 461
I++L +E E+K L ILGL+P + +EVL+QLKDKALKRA LT
Sbjct: 438 KQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRAGLT 497
Query: 462 EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
EE + + IE+R ARKNK F SD IR +L KGIALMD T+WRPC
Sbjct: 498 EEKLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWRPC 546
>gi|413945619|gb|AFW78268.1| hypothetical protein ZEAMMB73_967684 [Zea mays]
Length = 568
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/541 (55%), Positives = 374/541 (69%), Gaps = 34/541 (6%)
Query: 4 SKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVS 63
S + TVA L ++NS+T+++E F P V GKVGMYVCGVT YD SH+GHARA V+
Sbjct: 18 SSPSATVAQATALPQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVA 77
Query: 64 FDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCL 123
FD+LYRYL+ L EV YVRNFTD+DDKII+RAN+ GE SLS+R+ E+L+DM +LQCL
Sbjct: 78 FDVLYRYLKFLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSRFINEFLLDMTELQCL 137
Query: 124 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 183
PPT +PRV++H+E I ++IT+I+ ND AY +EGDV+F+VE P Y LSG++ + N+AG
Sbjct: 138 PPTCEPRVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGA 197
Query: 184 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 243
RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG
Sbjct: 198 RVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGG 257
Query: 244 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR--------- 294
DLIFPHHENE+AQS AA +S V WMHNG V +++KM+KS NFFTIR
Sbjct: 258 KDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDLSLEVITV 317
Query: 295 ---QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE 351
QIT YHPLALR FL+ HYRS +N+S L+ ASD V+YI+QTL DCE L+ ++E
Sbjct: 318 VFVQITALYHPLALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYRE 377
Query: 352 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 411
G + + ++ I+K EF MS+DL T+ +L F + LK INSSLN LKK Q K
Sbjct: 378 EGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQK 437
Query: 412 QQQLS----------------------LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 449
+Q I++L +E E+K L ILGL+P + +EVL+Q
Sbjct: 438 IEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEVLKQ 497
Query: 450 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 509
LKDKALKRA LTEE + + IE+R ARKNK F SD IR +L KGIALMD T+WRP
Sbjct: 498 LKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWRP 557
Query: 510 C 510
C
Sbjct: 558 C 558
>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 296/514 (57%), Positives = 366/514 (71%), Gaps = 23/514 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++NSMT++KELF P V GKVGMYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 48 LQLFNSMTKKKELFVPRVEGKVGMYVCGVTPYDFSHVGHARAYVAFDVLYRYLKFLGYEV 107
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN GE SLS+R+ E+L D+A+LQCLPPT++PRV++H+E I
Sbjct: 108 DYVRNFTDIDDKIIKRANQNGETVTSLSSRFITEFLADVAELQCLPPTHEPRVTEHIENI 167
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+IT+II N AYVV+GDV+F+V+ P Y LSG+ L++NRAG RVAVD+RKRNPADFA
Sbjct: 168 IKLITEIIKNGKAYVVDGDVYFSVDNFPEYLSLSGRILDHNRAGSRVAVDTRKRNPADFA 227
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 228 LWKAAKEGEPSWESPWGNGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 287
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG + +++KMSKS+ NFFTIR I YHPLALR FL+ HY+S
Sbjct: 288 RAAYPESEVKCWMHNGFINIDDQKMSKSVNNFFTIRDIITLYHPLALRFFLMRTHYKSDA 347
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ ASD V+YI+QTL DC+ +S +E +A + + ++ F MS
Sbjct: 348 NHSDKALEIASDRVYYIFQTLYDCDEVVSLHREENTSAPVPAEEQKLVDDHHKAFLESMS 407
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL--------------------- 417
DDL T+ +L G F + LK IN +LN LKK Q K +Q
Sbjct: 408 DDLRTTDVLDG-FMELLKAINGNLNDLKKLQQKLEQQKKKQQQQKKQQQKQQRPQKQPED 466
Query: 418 -IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 476
I++L + E+K L ILGL+PP +EVL+QLK+KALKRA LTEE + + IE R AAR
Sbjct: 467 HIQALNALGAEIKHKLSILGLMPPSPLAEVLKQLKEKALKRAGLTEESLSEQIEHRIAAR 526
Query: 477 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
NK F SDQIR +L KGIALMD T+WRPC
Sbjct: 527 NNKQFEVSDQIRKELASKGIALMDEPTGTVWRPC 560
>gi|357114089|ref|XP_003558833.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 1 [Brachypodium
distachyon]
Length = 562
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 296/513 (57%), Positives = 359/513 (69%), Gaps = 23/513 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++NSMT++KE F P V GKVGMYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 49 LHLFNSMTKKKEPFVPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYEV 108
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII RAN GE SLS R+ E+L+DMA LQCLPPT +PRV++H+E I
Sbjct: 109 EYVRNFTDIDDKIIDRANKAGETVTSLSTRFINEFLIDMAKLQCLPPTCEPRVTEHIEHI 168
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I +II ND AYV +GDVFF+++ P Y LSG+ L++NR G RVAVD RKRN DFA
Sbjct: 169 IDLIAEIIKNDKAYV-DGDVFFSIDSFPEYNSLSGRNLDDNRPGSRVAVDPRKRNRNDFA 227
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 228 LWKAAKEGEPFWESPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 287
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA DS V WMHNG V ++EKMSKSL NFF+IR+I YHPLALR FL+ HY+S +
Sbjct: 288 RAAYPDSEVKCWMHNGFVNKDDEKMSKSLNNFFSIREIITLYHPLALRFFLMRTHYKSDV 347
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ ASD V+YIYQTL DC+ LS ++E + + + +++ F MS
Sbjct: 348 NHSDKALEIASDRVYYIYQTLHDCDEVLSLYREENISVPVPDEEQKLVDEHHTAFLDSMS 407
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL--------------------- 417
DDL T+ +L G F LK INS+LN KK Q K +Q
Sbjct: 408 DDLRTTDVLDG-FMGLLKAINSNLNDFKKLQQKLEQQKKKQQQKKQQQKQQRPQKQPEDH 466
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 477
I++L +E E+K L ILGL+PP + EVL++LK+KALKRA LTEE + + IE+R AAR
Sbjct: 467 IQALISLEAEIKNKLSILGLMPPSSLVEVLKELKEKALKRAGLTEETLREQIEQRVAARN 526
Query: 478 NKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
NK F SDQIR L KGIALMD T+WRPC
Sbjct: 527 NKQFDVSDQIRKQLASKGIALMDEPTGTVWRPC 559
>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
gi|413949577|gb|AFW82226.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
gi|413949578|gb|AFW82227.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
Length = 561
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 297/535 (55%), Positives = 368/535 (68%), Gaps = 28/535 (5%)
Query: 4 SKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVS 63
S + T+A L ++NS T+++E F P V GKVGMYVCGVT YD SH+GHARA V+
Sbjct: 19 SPPSATIAEATAPPQLLLFNSFTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVA 78
Query: 64 FDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCL 123
FD+LYRYL+ L EV YVRNFTD+DDKII+RAN+ GE SLS+++ E+L+DM +LQCL
Sbjct: 79 FDVLYRYLKFLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSQFINEFLLDMTELQCL 138
Query: 124 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 183
PPT +PRV++H+E I +ITQI+ N AY +EGDV+F+VE P Y LSG++ + N+AG
Sbjct: 139 PPTCEPRVTEHIEHIIKLITQIMENGKAYAIEGDVYFSVESFPEYLSLSGRKFDQNQAGA 198
Query: 184 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 243
RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG
Sbjct: 199 RVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGG 258
Query: 244 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
DLIFPHHENE+AQS AA DS V WMHNG V +++KM+KS NFFTIR I YHP+
Sbjct: 259 KDLIFPHHENELAQSRAAYPDSEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDIIALYHPM 318
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
ALR FL+ HYRS +N+S L+ ASD V+YIYQTL DCE L+ ++E G + + +
Sbjct: 319 ALRFFLMRTHYRSDVNHSDQALEIASDRVYYIYQTLYDCEEVLATYREEGTSLPVPSEEQ 378
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS------- 416
+ I K EF MS+DL T+ +L F + LK INSSLN LKK Q K +Q
Sbjct: 379 NLIGKHHSEFLKHMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQK 438
Query: 417 ---------------------LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKAL 455
I++L +E E+K L ILGL+P + +EVL+QLKDK+L
Sbjct: 439 KQQQQKQQQQKQQQLQKQPEDYIQALIALETELKNKLSILGLMPSSSLAEVLKQLKDKSL 498
Query: 456 KRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
KRA LTEE + + IE+R ARKNK F SD IR +L KGIALMD T+WRPC
Sbjct: 499 KRAGLTEEQLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWRPC 553
>gi|357114091|ref|XP_003558834.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 2 [Brachypodium
distachyon]
Length = 548
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 287/501 (57%), Positives = 351/501 (70%), Gaps = 13/501 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++NSMT++KE F P V GKVGMYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 49 LHLFNSMTKKKEPFVPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYEV 108
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII RAN GE SLS R+ E+L+DMA LQCLPPT +PRV++H+E I
Sbjct: 109 EYVRNFTDIDDKIIDRANKAGETVTSLSTRFINEFLIDMAKLQCLPPTCEPRVTEHIEHI 168
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I +II ND AYV +GDVFF+++ P Y LSG+ L++NR G RVAVD RKRN DFA
Sbjct: 169 IDLIAEIIKNDKAYV-DGDVFFSIDSFPEYNSLSGRNLDDNRPGSRVAVDPRKRNRNDFA 227
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 228 LWKAAKEGEPFWESPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 287
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA DS V WMHNG V ++EKMSKSL NFF+IR+I YHPLALR FL+ HY+S +
Sbjct: 288 RAAYPDSEVKCWMHNGFVNKDDEKMSKSLNNFFSIREIITLYHPLALRFFLMRTHYKSDV 347
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ ASD V+YIYQTL DC+ LS ++E + + + +++ F MS
Sbjct: 348 NHSDKALEIASDRVYYIYQTLHDCDEVLSLYREENISVPVPDEEQKLVDEHHTAFLDSMS 407
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL---------IESLRKIENEVK 429
DDL T+ +L G K++Q KQQQ I++L +E E+K
Sbjct: 408 DDLRTTDVLDGFMGLLKLQQKLEQQKKKQQQKKQQQKQQRPQKQPEDHIQALISLEAEIK 467
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
L ILGL+PP S ++++LK+KALKRA LTEE + + IE+R AAR NK F SDQIR
Sbjct: 468 NKLSILGLMPP---SSLVEELKEKALKRAGLTEETLREQIEQRVAARNNKQFDVSDQIRK 524
Query: 490 DLTRKGIALMDMGKETIWRPC 510
L KGIALMD T+WRPC
Sbjct: 525 QLASKGIALMDEPTGTVWRPC 545
>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
Length = 502
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 282/507 (55%), Positives = 364/507 (71%), Gaps = 23/507 (4%)
Query: 25 MTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M+++KE+F P +PGK+ MYVCGVTAYD SH+GHAR V FD+LYRY + EVTYVRNF
Sbjct: 1 MSREKEVFRPRIPGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFPFMGYEVTYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TD+DDKII+RANDLG++P+ LSNR+C E+ DMA L+CL P+ +PRVS +++QI MI+Q
Sbjct: 61 TDIDDKIIKRANDLGDDPIELSNRFCDEFHRDMASLRCLAPSLEPRVSRNIDQIIKMISQ 120
Query: 145 IINNDCAYVVE-GDVFFAVEK-----SPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I+ N YV++ GDV+F+++K +YGRLSG++L++NRAGERVAVD RK NP DF
Sbjct: 121 ILENGYGYVLDNGDVYFSLDKFVPAFPDSYGRLSGRKLDDNRAGERVAVDDRKLNPGDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA GEPSW+SPWG GRPGWHIECSAMS L S FDIHGGG+DLIFPHHENEI QS
Sbjct: 181 LWKAN--GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQS 238
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC +SNV+YWMHNG VT ++EKMSKSLGNFFTIR++ E YHPLALR FL+ HYRSP+
Sbjct: 239 RAACHESNVTYWMHNGFVTVDSEKMSKSLGNFFTIREVFELYHPLALRWFLLCTHYRSPI 298
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS QL +AS +FY+YQTL D + + Q+ K+ ++ A + LR + ++
Sbjct: 299 NYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAEIAKALRLSLRSSLA 358
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG-- 436
DDLNT + GA + LK +N L+ K ++ K S SL + EV++ L +LG
Sbjct: 359 DDLNTP-VTIGALSEPLKLMNELLHSKKGRKDK----SRYSSLDLLRLEVEQALEVLGFS 413
Query: 437 -------LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
L+ S+VL++L+ KALKRA LTE+++L I ERAAAR +KDF KSD+IR
Sbjct: 414 VADYSQALITQLFLSQVLEELRSKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIRD 473
Query: 490 DLTRKGIALMD-MGKETIWRPCVLVEQ 515
L+ GI+LMD G ET+WRP V E+
Sbjct: 474 KLSSLGISLMDGGGDETLWRPSVTSEE 500
>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
Length = 523
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/494 (54%), Positives = 358/494 (72%), Gaps = 2/494 (0%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++++ T+ F P V GKV MYVCGVT YD SH+GHARA V+FD+L+RYL++L EV
Sbjct: 22 LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYEV 81
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI
Sbjct: 82 NYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQI 141
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+IT+I++N AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFA
Sbjct: 142 IDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFA 201
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS
Sbjct: 202 LWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQS 261
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG V + +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +
Sbjct: 262 QAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDV 321
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L AS ++YIYQTL D E +S + EH I + I + F +MS
Sbjct: 322 NHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENHSNFLEKMS 381
Query: 379 DDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DDL+T+ L Q L+ + +++Q +++ I++L ++NEV + L ILG
Sbjct: 382 DDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILG 441
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L+P + +E L+QLKDKALKRA +T E + Q+IE+R ARKNKDF++SD+IR +L+ GI
Sbjct: 442 LMPMSSLAEALKQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGI 501
Query: 497 ALMDMGKETIWRPC 510
ALMD T+WRP
Sbjct: 502 ALMDEPTGTLWRPS 515
>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
Length = 492
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/498 (55%), Positives = 358/498 (71%), Gaps = 15/498 (3%)
Query: 25 MTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
M+++KE+F P + GK+ MYVCGVTAYD SH+GHAR V FD+LYRY + EVTYVRNF
Sbjct: 1 MSREKEVFRPRIHGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFTFMGYEVTYVRNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TD+DDKII+RANDLG++P+ LSNR+C E+ DMA L+CL P+ +PRVS +++QI MI+Q
Sbjct: 61 TDIDDKIIKRANDLGDDPIELSNRFCDEFRRDMASLRCLAPSLEPRVSRNIDQIIKMISQ 120
Query: 145 IINNDCAYVVE-GDVFFAVEKS----PN-YGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I+ N YV++ GDV+F+++K P+ YGRLSG++L++NRAGERVAVD RK NP DF
Sbjct: 121 ILENGYGYVLDNGDVYFSLDKFVPAFPDCYGRLSGRKLDDNRAGERVAVDDRKLNPGDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA GEPSW+SPWG GRPGWHIECSAMS L S FDIHGGG+DLIFPHHENEI QS
Sbjct: 181 LWKAN--GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQS 238
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC +SN++YWMHNG VT ++EKMSKSLGNFFTIR++ E YHPLALR FL+ HYRSP+
Sbjct: 239 RAACHESNITYWMHNGFVTVDSEKMSKSLGNFFTIREVFELYHPLALRWFLLCTHYRSPI 298
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS QL +AS +FY+YQTL D + + Q+ K+ ++ A + LR + ++
Sbjct: 299 NYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAENAKALRLSLRSSLA 358
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT + GA + LK +N L+ + ++ K S SL + EV++ L +LG
Sbjct: 359 DDLNTP-VTIGALSEPLKLMNELLHSKRGRKDK----SRYSSLDLLRLEVEQALEVLG-F 412
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
YS+ L KALKRA LTE+++L I ERAAAR +KDF KSD+IR L+ GI+L
Sbjct: 413 SVADYSQALFLPTCKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIRDKLSSLGISL 472
Query: 499 MD-MGKETIWRPCVLVEQ 515
MD G ET+WRP V E+
Sbjct: 473 MDGGGDETLWRPSVTSEE 490
>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
Length = 520
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/494 (54%), Positives = 356/494 (72%), Gaps = 5/494 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++++ T+ F P V GKV MYVCGVT YD SH+GHARA V+FD+L+RYL++L EV
Sbjct: 22 LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYEV 81
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI
Sbjct: 82 NYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQI 141
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+IT+I++N AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFA
Sbjct: 142 IDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFA 201
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS
Sbjct: 202 LWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQS 261
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG V + +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +
Sbjct: 262 QAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDV 321
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L AS ++YIYQTL D E +S + EH I + I + R F +MS
Sbjct: 322 NHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMS 381
Query: 379 DDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DDL+T+ L Q L+ + +++Q +++ I++L ++NEV + L ILG
Sbjct: 382 DDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILG 441
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L+P S + +QLKDKALKRA +T E + Q+IE+R ARKNKDF++SD+IR +L+ GI
Sbjct: 442 LMP---MSSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGI 498
Query: 497 ALMDMGKETIWRPC 510
ALM T+WRP
Sbjct: 499 ALMGEPTGTLWRPS 512
>gi|357140592|ref|XP_003571849.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 532
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/515 (51%), Positives = 348/515 (67%), Gaps = 37/515 (7%)
Query: 28 QKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDV 87
+ E+F P+V GKV MYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV YV NFTD+
Sbjct: 15 ETEVFRPVVEGKVSMYVCGVTTYDFSHVGHARAYVAFDVLYRYLKCLGYEVQYVHNFTDI 74
Query: 88 DDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIIN 147
DDKIIRRAN+ GE +LS+R+ E+L DM LQCLPPT++PRV+DH++QI D+IT+I
Sbjct: 75 DDKIIRRANEAGETATNLSSRFIDEFLHDMVQLQCLPPTHEPRVTDHIKQIIDLITKIKG 134
Query: 148 NDCAYVVEGD-VFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAG 206
D AYV+EG+ V+F+V+ P Y LSG++LE+N G RVA+D+RKRNPADFALWK+AK G
Sbjct: 135 KDKAYVIEGEGVYFSVDNFPEYLSLSGRKLEHNLPGSRVAIDTRKRNPADFALWKSAKDG 194
Query: 207 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 266
EP W+SPWG GRPGWHIECSAMS HYL FDIHGGG DLIFPHHENE+AQS AA S
Sbjct: 195 EPFWESPWGRGRPGWHIECSAMSEHYLGQLFDIHGGGKDLIFPHHENELAQSRAANSKSE 254
Query: 267 VSY--WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 324
V WMHNG V NN +KM+K NFFTI I YHP+ALR FL+ HYRS +N S
Sbjct: 255 VKLECWMHNGFVNNNGQKMAKPDKNFFTI-DIISLYHPMALRLFLMRTHYRSDVNQSDTA 313
Query: 325 LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 384
L+ AS V+YIYQTLQD + +S + + + + ++K +EF M++DL+T
Sbjct: 314 LEFASGRVYYIYQTLQDSQEVISLYCDDKLDFPVPTGDQAVVDKNHEEFLKHMANDLHTK 373
Query: 385 HILTGAFQDALK---FINSSLNMLKKKQPK--------------------------QQQL 415
GA + +K IN++L+ LKK Q K +Q
Sbjct: 374 ----GALDELMKPIXAINNNLSDLKKLQQKLEQEKKKQAVKKQQQQQTEEGKQQAQKQTG 429
Query: 416 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 475
+++L + EV L ILGL+P + +E +++LKDKALKRA ++EE++ Q+I +R
Sbjct: 430 HYVQALVALHGEVTSKLSILGLMPXPSLAEAVKELKDKALKRAGMSEEELHQVIXQRTVT 489
Query: 476 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
RKNKDF++SD+IR L+ +GIALMD T+W+P
Sbjct: 490 RKNKDFAESDRIRTVLSARGIALMDEPTGTVWKPA 524
>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
Length = 561
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/535 (48%), Positives = 350/535 (65%), Gaps = 46/535 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++++ T+ F P V GKV MYVCGVT YD SH+GHARA V+FD+L+RYL++L E+
Sbjct: 22 LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGFEI 81
Query: 79 T-----------------------------------------YVRNFTDVDDKIIRRAND 97
++ D+ KII+RAN+
Sbjct: 82 IKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIIKRANE 141
Query: 98 LGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGD 157
GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI D+IT+I++N AY +EGD
Sbjct: 142 AGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGD 201
Query: 158 VFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPG 217
V+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFALWK+AK GEPSW+SPWG G
Sbjct: 202 VYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRG 261
Query: 218 RPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVT 277
RPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V
Sbjct: 262 RPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESEVKCWMHNGFVN 321
Query: 278 NNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQ 337
+ +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +N+S L AS ++YIYQ
Sbjct: 322 KDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQ 381
Query: 338 TLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDAL 395
TL D E +S + EH I + I + R F +MSDDL+T+ L Q L
Sbjct: 382 TLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKL 441
Query: 396 KFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKAL 455
+ + +++Q +++ I++L ++NEV + L ILGL+P S + +QLKDKAL
Sbjct: 442 EHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMP---MSSLAEQLKDKAL 498
Query: 456 KRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
KRA +T E + Q+IE+R ARKNKDF++SD+IR +L+ GIALM T+WRP
Sbjct: 499 KRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMGEPTGTLWRPS 553
>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/402 (62%), Positives = 305/402 (75%), Gaps = 12/402 (2%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
MA+L CLPP+ +PRVSDH++QI +MI QII+NDCAY + GDV+F+VE P YG LSG++L
Sbjct: 1 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
++NRAGERVAVD RK+NPADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 61 DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG DLIFPHHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKT 355
TE YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTLQDCE + Q + G
Sbjct: 181 TELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 240
Query: 356 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQ 414
+N +CI KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 241 LPVN--TTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-- 295
Query: 415 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 474
+ESL +E +++ VL +LGLL P +Y E LQQL++KAL+RA +TEE VLQ IEER +
Sbjct: 296 ---LESLSAMEEKIRMVLSVLGLL-PSSYYEALQQLREKALRRASMTEEQVLQKIEERTS 351
Query: 475 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQ 515
ARK K + KSD+IR +L GIALMD T WRP V L EQ
Sbjct: 352 ARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 393
>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 491
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/494 (51%), Positives = 337/494 (68%), Gaps = 34/494 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++++ T+ F P V GKV MYVCGVT YD SH+GHARA V+FD+L+RYL++L EV
Sbjct: 22 LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYEV 81
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI
Sbjct: 82 NYVRNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQI 141
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+IT+I++N AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFA
Sbjct: 142 IDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFA 201
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS
Sbjct: 202 LWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQS 261
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S +I YHP+ALR FL+ HYRS +
Sbjct: 262 QAAYPES-----------------------------EIISLYHPMALRLFLMRTHYRSDV 292
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L AS ++YIYQTL D E +S + EH I + I + R F +MS
Sbjct: 293 NHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMS 352
Query: 379 DDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DDL+T+ L Q L+ + +++Q +++ I++L ++NEV + L ILG
Sbjct: 353 DDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILG 412
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L+P S + +QLKDKALKRA +T E + Q+IE+R ARKNKDF++SD+IR +L+ GI
Sbjct: 413 LMP---MSSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGI 469
Query: 497 ALMDMGKETIWRPC 510
ALM T+WRP
Sbjct: 470 ALMGEPTGTLWRPS 483
>gi|145330001|ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 401
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/395 (60%), Positives = 297/395 (75%), Gaps = 6/395 (1%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
M LQCL P+ QPRVSDH+ QI D+I QI++N AY V+GD++F+V+K P YG+LSG++L
Sbjct: 1 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
E+NRAGERVAVD+RK++PADFALWKAAK GEP W+SPWG GRPGWHIECSAMSA YL
Sbjct: 61 EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG+DL+FPHHENEIAQSCAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 121 FDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQV 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 356
+ YHPLALR FL+ HYRSP+NYS L+SAS+ +FYIYQTL DCE AL +
Sbjct: 181 IDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENG 240
Query: 357 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 416
+ IN R EF A MSDDL T L A + LK IN ++ K K+ +++
Sbjct: 241 SVPSDTLTSINTFRTEFVASMSDDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARRE-- 297
Query: 417 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 476
ESL+ +E +++VL ILGL+P +YSEVL+QLK+KALKRA L EEDVLQ ++ER AR
Sbjct: 298 --ESLKALETTIRDVLTILGLMPT-SYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDAR 354
Query: 477 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 511
KNK++ +SD IR DL + GIALMD + T WRP +
Sbjct: 355 KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAI 389
>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
Length = 400
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/405 (60%), Positives = 304/405 (75%), Gaps = 15/405 (3%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
MA+LQCLPP+ +PRVSDH+++I +MI QI++N CAYVV GDV+F+V+ P YG LSG++L
Sbjct: 1 MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
++NRAGERVAVD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 61 DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG DLIFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 356
E YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE +H ++
Sbjct: 181 IEMYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCE----EICQHQQSN 236
Query: 357 RINPAAEDCIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQ 412
NP + +N KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 237 TGNPLPANTLNYIQKLHDEFETSMSDDLHTS-VALAAMSEPLKVMNDLLHTRKGKKQDKR 295
Query: 413 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 472
+ESL +E +++ VL +LGLL P +Y E LQQL+DKAL+RA +TEE V+Q IEER
Sbjct: 296 -----LESLSALEEKIRVVLSVLGLL-PSSYHEALQQLRDKALRRASITEELVVQKIEER 349
Query: 473 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQ 517
AARK K + KSD+IR +L GIALMD T WRP + + +E+
Sbjct: 350 TAARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSLPLPEEE 394
>gi|343172442|gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/405 (62%), Positives = 314/405 (77%), Gaps = 7/405 (1%)
Query: 112 EYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGR 170
E+L DM DLQCLPP++QP VSDH+++I +MI ++IN D AY ++ GDV+F+V+K YG
Sbjct: 1 EFLKDMDDLQCLPPSHQPCVSDHIKEIIEMIEELINKDSAYSLDDGDVYFSVDKFERYGL 60
Query: 171 LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSA 230
LS ++LE+NRAGERV+VD RKRNPADFALWK+AK GE SW SPWG GRPGWHIECSAMSA
Sbjct: 61 LSNRKLEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSA 120
Query: 231 HYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNF 290
YL+ FDIHGGGIDLIFPHHENE+AQSCAAC ++NV YW+HNG V N EKMSKS GN+
Sbjct: 121 KYLTYAFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNY 180
Query: 291 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 350
FTIRQ+T+RYHPLA+R+FL+S +Y SP+N+S+ Q D ASDA++ IYQTL DC AL PFQ
Sbjct: 181 FTIRQVTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAIYRIYQTLLDCSDALKPFQ 240
Query: 351 ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 406
E+ K + P +L RMSDDL+ + IL G+ Q+ALK IN LN LK
Sbjct: 241 ENVNENAKASSKKP-VNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINIELNGLK 299
Query: 407 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 466
KKQ +Q+ L+ ++SL ++E E++ VL +LGLL P YSEVL QLK+KAL RAE+TE+DV
Sbjct: 300 KKQKQQKLLA-VQSLTELEAEIRYVLEVLGLLSPAPYSEVLDQLKEKALLRAEMTEDDVS 358
Query: 467 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 511
QLIEERA ARKNK+F KSD+IR LT KGI+LMD+ T WRPCV
Sbjct: 359 QLIEERAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCV 403
>gi|343172444|gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/405 (62%), Positives = 313/405 (77%), Gaps = 7/405 (1%)
Query: 112 EYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGR 170
E+L DM DLQCLPP++QP VSDH+ +I +MI ++I D AY ++ GDV+F+V+K YG
Sbjct: 1 EFLKDMDDLQCLPPSHQPCVSDHIREIIEMIEELIKKDSAYSLDDGDVYFSVDKFERYGL 60
Query: 171 LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSA 230
LS ++LE+NRAGERV+VD RKRNPADFALWK+AK GE SW SPWG GRPGWHIECSAMSA
Sbjct: 61 LSNRKLEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSA 120
Query: 231 HYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNF 290
YL+ FDIHGGGIDLIFPHHENE+AQSCAAC ++NV YW+HNG V N EKMSKS GN+
Sbjct: 121 KYLTYSFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNY 180
Query: 291 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 350
FTIRQ+T+RYHPLA+R+FL+S +Y SP+N+S+ Q D ASDAV+ IYQTL DC AL PFQ
Sbjct: 181 FTIRQVTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAVYRIYQTLLDCSDALKPFQ 240
Query: 351 ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 406
E+ K + P +L RMSDDL+ + IL G+ Q+ALK IN+ LN LK
Sbjct: 241 ENVNENAKASSKKP-VNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINNELNGLK 299
Query: 407 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 466
KKQ +Q+ L+ ++SL ++E E++ VL +LGLL P YSEVL QLK+KAL RAE+TE+DV
Sbjct: 300 KKQKQQKLLA-VQSLTELEAEIRYVLEVLGLLSPAPYSEVLHQLKEKALLRAEMTEDDVS 358
Query: 467 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 511
QLIEERA ARKNK+F KSD+IR LT KGI+LMD+ T WRPCV
Sbjct: 359 QLIEERAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCV 403
>gi|384251815|gb|EIE25292.1| tRNA synthetase class I (C) family protein [Coccomyxa
subellipsoidea C-169]
Length = 536
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/506 (49%), Positives = 326/506 (64%), Gaps = 20/506 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPG---KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
L ++N+M+ +KELF P PG KV MY CGVT YD SH+GHAR +FD+L+RYL HL
Sbjct: 32 LWLHNTMSGRKELFQP-RPGQGNKVSMYCCGVTVYDYSHVGHARVYCAFDVLFRYLRHLG 90
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
EV YVRNFTD+DDKII+RA++ GE+PL LS R+ E+ DM L CL PT +P+ +D +
Sbjct: 91 YEVDYVRNFTDIDDKIIKRASETGEDPLQLSQRFIHEFHTDMDALNCLAPTSEPKATDFI 150
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
Q+ DMI +I+ Y +G V+F+VE P YGRLSG+ L++NRAGERVAV++ KRNPA
Sbjct: 151 SQMVDMIGRIVKAGHGYEADGSVWFSVESVPGYGRLSGRSLDDNRAGERVAVNTTKRNPA 210
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKAAK GEP WDSPWGPGRPGWHIECSAM + DIHGGG DLI PHH+NE+
Sbjct: 211 DFVLWKAAKVGEPKWDSPWGPGRPGWHIECSAMIRELMGPIIDIHGGGRDLIHPHHDNEL 270
Query: 256 AQSCAA---CQDSN-------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
QS AA C N V +WMH G V ++EKMSKSLGNFFTIR + + YHP+AL
Sbjct: 271 VQSQAAACECDRENMLDHRDFVRWWMHLGFVNVDSEKMSKSLGNFFTIRDVLQMYHPMAL 330
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 365
R FLI+ YR +NY+ L ASD ++YIYQTLQD E AL+ G+ +
Sbjct: 331 RWFLINTQYRQAINYTERSLQEASDRLYYIYQTLQDAEAALTAAAAAGEQVSVATEQHSN 390
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
KL A + DDLNT A + LK +N L+ K K+ + ++++ ++
Sbjct: 391 GTKLLKSVEASLCDDLNTPQAFA-ALSEPLKTMNDLLHTKKGKKAGGR----LQTIATLQ 445
Query: 426 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 485
+ VL +LG L G VL +++ +AL RA L E+DV IE RA AR KD++ +D
Sbjct: 446 QALNSVLELLG-LGAGDIGAVLVEMRQRALHRAGLKEQDVELSIERRAVARAAKDYASAD 504
Query: 486 QIRADLTRKGIALMDMGKETIWRPCV 511
+ RA L +GI +MD + T+WRP +
Sbjct: 505 KERAFLAERGIMIMDGSEGTLWRPGI 530
>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
Length = 661
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/512 (48%), Positives = 330/512 (64%), Gaps = 20/512 (3%)
Query: 16 DLT-LKIYNSMTQQKELFTPIVPG--KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLE 72
DLT L + N+MT++KELF P P KV MYVCGVT YD SH+GHAR V+FD+LYR L
Sbjct: 156 DLTKLWLTNTMTRKKELFIPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRRLM 215
Query: 73 HLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVS 132
L +VTY RNFTD+DDKII+R+N+ GE +L+N++ + DM L CL PT +PR +
Sbjct: 216 GLGYDVTYCRNFTDIDDKIIKRSNESGETCEALTNKFIDAFHEDMTALGCLRPTLEPRAT 275
Query: 133 DHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
+ ++ I I ++I AY GDV+F+V+ P YG LSG++ ++NRAGERVAVD RK+
Sbjct: 276 ECVDDIIAFIERLIAKGNAYEASGDVYFSVDTLPAYGALSGRKQDDNRAGERVAVDERKK 335
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
NPADFALWK AK GEP+W SPWG GRPGWHIECSAM L DIHGGG DL+FPHHE
Sbjct: 336 NPADFALWKTAKPGEPTWTSPWGDGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHE 395
Query: 253 NEIAQSCAAC-----QDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
NE+AQS AAC D N V YW+HNG V ++EKMSKSLGNFFTIR++ ++YHP L
Sbjct: 396 NELAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLDKYHPFVL 455
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 365
R L+ AHYR+P+NY+ L+ ASD V+Y+YQTLQD + + P D
Sbjct: 456 RFMLLGAHYRAPINYTQRALEEASDRVYYLYQTLQDVRSVIRDAAVEEDATKPVPMVADA 515
Query: 366 I---NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 422
+ N+ + ++DDLNT ++ L S+N + ++ + + +L+
Sbjct: 516 LKLANETEKQVLESLNDDLNTPAVMA-----TLSAPLKSMNDFMTTKAGKKAVGRVRALQ 570
Query: 423 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 482
+ ++ VL +G +P G L +L+ KAL RA LTE+ +L IEER AR KDF+
Sbjct: 571 ALLTSIEGVLEAVG-MPRGEEDVFLGELRAKALHRAGLTEDALLAKIEERKKARDAKDFA 629
Query: 483 KSDQIRADLTRKGIALMDMGKETIWRPCVLVE 514
+SD++R +L+ +GI LMD G WRP +V+
Sbjct: 630 ESDRLRDELSARGIGLMD-GAAVAWRPVPVVD 660
>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/503 (47%), Positives = 329/503 (65%), Gaps = 21/503 (4%)
Query: 25 MTQQKELFTPIVPG--KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVR 82
MT++KE+FTP P KV MYVCGVT YD SH+GHAR V+FD+LYR L L +VTY R
Sbjct: 1 MTRKKEIFTPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRQLMRLGYDVTYCR 60
Query: 83 NFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMI 142
NFTD+DDKII+R+N+ GE +L++++ + + DMA L CL PT +PR ++ ++ I I
Sbjct: 61 NFTDIDDKIIKRSNESGETCEALTDKFIEAFHEDMAALGCLRPTLEPRATECVDDIIAFI 120
Query: 143 TQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKA 202
++I AY EGDV+F+V+ P YG LSG+ E+NRAGERVAVD RK+NPADFALWK
Sbjct: 121 ERLIAKGNAYETEGDVYFSVDTLPAYGALSGRNQEDNRAGERVAVDGRKKNPADFALWKT 180
Query: 203 AKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC 262
AK GEP+W SPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+AQS AAC
Sbjct: 181 AKPGEPTWTSPWGEGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHENELAQSSAAC 240
Query: 263 -----QDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
D N V YW+HNG V ++EKMSKSLGNFFTIR++ ++YHP LR L+ AHYR
Sbjct: 241 GCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLDKYHPFVLRFMLLGAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+P+NY+ L+ ASD V+Y+YQT+ D L + P D + KL E
Sbjct: 301 APINYTQRALEEASDRVYYLYQTVHDVRAILRDAAAEEPAKKPVPLVADAL-KLASEAEK 359
Query: 376 RMS----DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
++S DD+NT ++ L S+N + ++ + + +L+ + + V+ +
Sbjct: 360 QVSEALNDDMNTPGVIA-----TLSAPLKSMNDFMTTKAGKKAVGRVGALQSLLSTVEGL 414
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +G +P + +L +L+ +AL RA LTE+D+L IEER AR KDF++SD++R +L
Sbjct: 415 MEAVG-MPKDEENVILAELRARALHRAGLTEDDLLAKIEERNKARDAKDFAESDRLRDEL 473
Query: 492 TRKGIALMDMGKETIWRPCVLVE 514
+ +G+ LMD G WRP +++
Sbjct: 474 SARGVGLMD-GSAVPWRPVPVID 495
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01.1|SYC_PELPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/498 (49%), Positives = 320/498 (64%), Gaps = 15/498 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++T +K+ F P+ PGK GMYVCGVT YD H+GHARA V FD++YRYL +
Sbjct: 1 MALRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGYSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYVRNFTD+DDKII RAN G + ++S RY + + DMA L PT +P+ +DHM
Sbjct: 61 AVTYVRNFTDIDDKIINRANQEGVDYTTISERYIEAFNQDMARLGLAKPTVEPKATDHMG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I +I AY +GDV++AVE P+Y RLSG+ LE+ AG RV VD RKRNP D
Sbjct: 121 GIISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDRKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YWMHNG V N+EKMSKSLGNFFTIR++ E+Y P LR F++SAHYRS
Sbjct: 241 QSEAANGCQFVRYWMHNGFVNINSEKMSKSLGNFFTIREVLEQYDPETLRFFILSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLR-- 370
P+++S L+ A + IY L + A+ P Q + A + PA + KL+
Sbjct: 301 PIDFSDQNLNDAQAGLERIYSCLAAVDGAMEGQDVPNQPV-EGAPLPPAGAELHEKLQSL 359
Query: 371 -DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M DD NT+ L G +A++ N + + P L+L+ +R++ E
Sbjct: 360 ISRFREAMDDDFNTAQAL-GVLFEAVRATNRFMAESGDQTPA--TLALLGQVRRLFAETG 416
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+VL + P A+ E ++Q K + E++ +++ QLI ERAAAR N+DF + D+IR
Sbjct: 417 DVLGLF-TSQPAAWLESIKQAKSDQM---EISPQEIEQLIAERAAARTNRDFKRGDEIRD 472
Query: 490 DLTRKGIALMDMGKETIW 507
L +KGI L+D + T W
Sbjct: 473 LLLQKGIQLLDSPQGTTW 490
>gi|337286143|ref|YP_004625616.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358971|gb|AEH44652.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 498
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/496 (47%), Positives = 328/496 (66%), Gaps = 12/496 (2%)
Query: 16 DLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
D+ +K N++T++KE+F P+ P +V MY CGVTAYD SHLGHARAAV FD+L+R+L+ L
Sbjct: 3 DIEIKFQNTLTRKKEVFEPLSPPRVTMYACGVTAYDESHLGHARAAVVFDVLFRFLKFLG 62
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
EV YVRN+TD+DDKII+RA ++G +P L+ RY + Y DM L+ L PTY+P+ ++H+
Sbjct: 63 FEVIYVRNYTDIDDKIIKRAYEVGVSPKELAERYIKSYDEDMKALKVLRPTYEPKATEHI 122
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
QI +I +I AYV +GDV+F+VEK P YG+LSG+ LE +AG R+AV +KR+P
Sbjct: 123 PQIIALIETLIKKGFAYVADGDVYFSVEKFPEYGKLSGRNLEELKAGARIAVSEKKRHPL 182
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKA K GEPSWDSPWG GRPGWHIECSAM+ +YL DIHGGG+DLIFPHHENEI
Sbjct: 183 DFALWKAEKPGEPSWDSPWGRGRPGWHIECSAMAMYYLGETIDIHGGGLDLIFPHHENEI 242
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA V YW+HNG VT EKMSKSLGNF TI+Q+ R+HP A+R FL+S HYR
Sbjct: 243 AQSEAATGKPFVRYWLHNGMVTVGREKMSKSLGNFVTIKQMLSRHHPEAIRLFLLSMHYR 302
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEF 373
SPL+Y+ + A+ +Y+TL E L P E + A+ + I ++F
Sbjct: 303 SPLDYTEKVVSDHEKALEGLYETLYLIE-KLRPSSEKAPENQQKNLAKISETIKNFENDF 361
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ ++DDLNT+ + G+ K +N+ L + +K + L L + + + ++ L
Sbjct: 362 ISALADDLNTARAI-GSLFSLEKALNNLLKLCARKVA-EDHLKLAKKGKTLATKLAGSL- 418
Query: 434 ILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
LG+L P A+ +++ + +AL L +++ +LI+ER ARK K+F K+D IR DL
Sbjct: 419 -LGILEESPEAF---IERKRSQALLAKGLDRDEIERLIKEREEARKAKNFEKADAIRDDL 474
Query: 492 TRKGIALMDMGKETIW 507
+KGI + D T W
Sbjct: 475 AQKGIIIRDTPWGTFW 490
>gi|255083368|ref|XP_002504670.1| cysteine-trna ligase [Micromonas sp. RCC299]
gi|226519938|gb|ACO65928.1| cysteine-trna ligase [Micromonas sp. RCC299]
Length = 522
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/518 (48%), Positives = 338/518 (65%), Gaps = 29/518 (5%)
Query: 18 TLKIYNSMTQQKELFTP--IVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
TL ++N+M ++KE F+P KV MYVCGVT YD SH+GHAR V+FD+LYR L +
Sbjct: 9 TLMLHNTMARRKEPFSPRDSTGKKVNMYVCGVTVYDYSHIGHARVYVAFDVLYRQLTRMG 68
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
+VTY RNFTDVDDKII+RAN+ GE +L +R+ + D+ L CL PT +PR +DH+
Sbjct: 69 YDVTYCRNFTDVDDKIIKRANENGEECDALVDRFIAAFHEDIDALGCLRPTIEPRATDHI 128
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ I M ++I AY +GDV+F+V+ P YG LSG++ E+NRAGERVAVD RK+NPA
Sbjct: 129 KDIVTMCERLIEKGYAYPADGDVYFSVDALPEYGSLSGRKQEDNRAGERVAVDDRKKNPA 188
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKAAK GEP+WDSPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+
Sbjct: 189 DFALWKAAKPGEPTWDSPWGAGRPGWHIECSAMIDSILGKSIDIHGGGQDLVFPHHENEL 248
Query: 256 AQSCAAC----------QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
AQS A+C ++ V YW+HNG V ++EKMSKSLGNFFTIR++TE+YHP AL
Sbjct: 249 AQSTASCRCCATDGDEPEEPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVTEKYHPFAL 308
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP----- 360
R L+ HYR+P+NY+ L+ ASD ++Y+YQTL D VAL+ + A +
Sbjct: 309 RWMLLGTHYRAPINYTQRALEEASDRLYYLYQTLVDSRVALTEAEASATDAEVKGKPKPP 368
Query: 361 ---AAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 415
AAE + + + + ++DDLNT + + LK +N ++ K K+ + +
Sbjct: 369 TGVAAEGIELAVETKAAVASALTDDLNTP-LAMASLSSPLKTLNDLVSTKKGKKAVGRNV 427
Query: 416 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 475
+LR + V+E L +G LP +L++L+ L RA LT+ DV + + +RA A
Sbjct: 428 ----ALRDLVKTVEETLEAVG-LPHEGGEGLLEELRLLTLARAGLTQADVDEAVAKRAEA 482
Query: 476 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLV 513
R KDF++SD+IR +L KG+ALMD G + +WRP +V
Sbjct: 483 RAAKDFAESDRIRDELGAKGVALMDGGSQ-VWRPATVV 519
>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 338
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/321 (66%), Positives = 258/321 (80%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++NSMT++KELF P+V GKV MYVCGVT YD SH+GHARA V+FD+LYRYL+ L EV
Sbjct: 11 LELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYEV 70
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTD+DDKII+RAN+ GE SLS+R+ E+L+DMA LQCLPPT +PRV+DH+E I
Sbjct: 71 EYVRNFTDIDDKIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCEPRVTDHIEHI 130
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++IT+I+ N AY +EGDV+F+V+ P Y LSG++L++N AG RVAVD+RKRNPADFA
Sbjct: 131 IELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDTRKRNPADFA 190
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS
Sbjct: 191 LWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQS 250
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +S V WMHNG V +++KMSKS NFFTIR I + YHP+ALR FL+ HYR +
Sbjct: 251 RAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFFLMRTHYRGDV 310
Query: 319 NYSVLQLDSASDAVFYIYQTL 339
N+S L+ ASD V+YIYQ L
Sbjct: 311 NHSDKALEIASDRVYYIYQVL 331
>gi|412992649|emb|CCO18629.1| cysteinyl-tRNA synthetase [Bathycoccus prasinos]
Length = 657
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/521 (47%), Positives = 328/521 (62%), Gaps = 32/521 (6%)
Query: 18 TLKIYNSMTQQKELFTPIVPG--KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
TL ++N+M+++KE+F P KV MYVCGVT YD SH+GHAR V+FD+LYR L L
Sbjct: 144 TLMLHNTMSRKKEIFKPRAENGNKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRTLRQLG 203
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
+VTY RNFTD+DDKII RAN+ G + L+ ++ Q + DM L CL P +PR + H+
Sbjct: 204 YDVTYCRNFTDIDDKIINRANESGTSCEELTEKFIQAFHEDMEALGCLRPDLEPRATQHV 263
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I D+IT++I + AY V+GDV+F+V+ YG LSG+ E+NRAGERV VD RK+NPA
Sbjct: 264 GDIIDLITRLIEKNHAYAVDGDVYFSVDSLSKYGSLSGRNQEDNRAGERVVVDGRKKNPA 323
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWK AK EP W+SPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+
Sbjct: 324 DFALWKTAKPNEPVWESPWGNGRPGWHIECSAMIEKLLGPVIDIHGGGQDLVFPHHENEL 383
Query: 256 AQSCAAC-------QDSN-VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 307
AQS AAC +D V YW+HNG V ++EKMSKSLGNFFTIR++ RYHP+ LR
Sbjct: 384 AQSSAACDCEIHKSEDKKFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLARYHPMVLRF 443
Query: 308 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA------RINPA 361
L+ AHYR+P+NY+ L+ +SD ++YIYQTL D AL E + +++P
Sbjct: 444 MLLGAHYRAPINYTQKALEESSDRLYYIYQTLLDARAALELKDEEFRAELENSKLKLSPL 503
Query: 362 AEDCINKLRDEFHARMS----DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
A D KL +E ++ DDLNT + + LK N L + ++ +
Sbjct: 504 AADA-KKLAEETKVSVAQALYDDLNTP-LAIASLSGPLKTTNDFLTT----KAGKKAVGR 557
Query: 418 IESLRKIENEVKEVLRILGLLPPGAY---SEVLQQLKDKALKRAELTEEDVLQLIEERAA 474
+ +L + +E++ L ILGL P A + +L +LK ALKRA L E+D+ L+ +RA
Sbjct: 558 LSALSSLVSELENTLSILGL--PTAVDKSTSILAELKALALKRAGLEEKDLEALMAQRAN 615
Query: 475 ARKNKDFSKSDQIRADLTRK-GIALMDMGKETIWRPCVLVE 514
AR K+F +SD++R +L K + G + WRP V E
Sbjct: 616 ARAAKNFEESDRLREELASKGIGLMDGGGGDDAWRPIVPAE 656
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0.1|SYC_GEOLS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/496 (47%), Positives = 314/496 (63%), Gaps = 15/496 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN+++ +KE F P V GKVGMYVCGVT YD H+GHARA + FD++YRYL
Sbjct: 1 MALRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTY+RN+TD+DDKII RAN G + ++++RY + DM L L PT +P+ +DH+E
Sbjct: 61 DVTYIRNYTDIDDKIINRANQEGTDYRTIADRYIATFDEDMDRLGMLRPTIEPKATDHIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I ++I+N AY V+GDV+FAVE P Y +LSG+ L++ AG RV VD RKRNP D
Sbjct: 121 DIISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDERKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP W+SPWG GRPGWHIECSAMS +L FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+HNG V N+EKMSKSLGNFFTIR++ E + P LR F++ AHYRS
Sbjct: 241 QSEGANGCQFVKYWLHNGFVNINSEKMSKSLGNFFTIREVLELFDPETLRFFILQAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA----EDCINKLRDE 372
PL+YS L A + IY+ L + AL E TA PA+ + + L
Sbjct: 301 PLDYSDQNLREAQAGLSRIYEALAALDQAL----EKPATAIHLPASAAEFAEKVAGLLPR 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT+ L G D+++ +N L + + +E LR E+ VL
Sbjct: 357 FREAMDDDFNTAQAL-GTLFDSIRTLNRLLA--EGGGSSSASRADLEQLRAAVTEIGAVL 413
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+ + P S+ L + + + E++ E++ LI ERAAARKNKDF +SD+IR L
Sbjct: 414 GLFRIKP----SDWLAAREAEKARHLEISPEEIEGLIVERAAARKNKDFKRSDEIRDYLL 469
Query: 493 RKGIALMDMGKETIWR 508
+ I L+D + T W+
Sbjct: 470 SRDIQLVDTPQGTAWK 485
>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 420
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/416 (56%), Positives = 287/416 (68%), Gaps = 23/416 (5%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
MA LQCLPPT +PRV+DH+E I ++IT+I+ N AY +EGDV+F+V+ P Y LSG++L
Sbjct: 1 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
++N AG RVAVD+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 61 DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 121 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDI 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 356
+ YHP+ALR FL+ HYR +N+S L+ ASD V+YIYQTL DCE LS ++ +
Sbjct: 181 IDLYHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISV 240
Query: 357 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL- 415
+ +D +NK EF M+DDL T+ +L G F D LK INS+LN KK Q K +Q
Sbjct: 241 PVPVEEQDMVNKHHSEFLESMADDLRTTDVLDG-FTDLLKAINSNLNDFKKLQQKLEQQK 299
Query: 416 ---------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKA 454
I+++ +E E+K + ILGL+PP + +E L+QLKDKA
Sbjct: 300 KKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKA 359
Query: 455 LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
LKRA LTEE + + IE+R AARKNK F SDQIR L KGIALMD T+WRPC
Sbjct: 360 LKRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPC 415
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/496 (46%), Positives = 314/496 (63%), Gaps = 21/496 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN+++ KELF P VPGKVGMYVCGVT YD H+GHARA + FD++YRYL++
Sbjct: 1 MSLRVYNTLSGNKELFEPRVPGKVGMYVCGVTVYDYCHIGHARANIVFDIVYRYLKYSDY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN+TDVDDKII RAN+ G LS + Q + DMA L PT QP+ ++H++
Sbjct: 61 DVTYVRNYTDVDDKIINRANERGITSQQLSEEFIQAFDEDMARLGLDLPTVQPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++ ++I N AY +GDV+FAVE +Y +LS + L+ +AG R+A +KRNP D
Sbjct: 121 HIIALVERLIANGKAYASDGDVYFAVESFDSYLKLSKRNLDEMQAGARIAPGEKKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSW+SPWG GRPGWHIECSAM YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKAAKPGEPSWESPWGKGRPGWHIECSAMGMEYLGESFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N EKMSKSLGNFFTIR I + Y P +R F++SAHYRS
Sbjct: 241 QSEAATGQPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILKTYDPEVVRFFILSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN--KLRDEFH 374
P+++S L A + Y+ LQ L A P+ + + +L +F
Sbjct: 301 PIDFSDQNLKEARLGLSRFYEGLQAAAEVL---------AECPPSDVEATDGAELTAKFR 351
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ + F+ ++N L + +++ L+ S+R + + E+ ++
Sbjct: 352 EAMDDDFNTAQAIGYLFEGI-----RTMNRLMATKKFRKKADLVASVRSLYDTFLELGKV 406
Query: 435 LGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
LG+ P A+ L Q + AL ++T E++ LI ER AR++KDF++SD IR +L
Sbjct: 407 LGMFGSEPKAW---LNQQRLSALADLDITVEEIDALIAERLQARQDKDFARSDAIRDELA 463
Query: 493 RKGIALMDMGKETIWR 508
KGI L+D T W+
Sbjct: 464 EKGILLLDGAGGTDWK 479
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9.1|SYC_SYNFM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/499 (46%), Positives = 314/499 (62%), Gaps = 15/499 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+ KE F P+ PGKV YVCGVT YDLSH+GHAR+A+ FD++YRYL L
Sbjct: 1 MVLHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKIIRRAND G + S++ RY + DM L L P +P ++++
Sbjct: 61 EVTYVRNFTDVDDKIIRRANDAGTDCRSIAQRYIAAFYEDMDALGVLRPDLEPLATENVP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ ++I +++ AY DVFF +EK P YG+LSG+++E+ AG RV VD+RKRNP D
Sbjct: 121 GMIEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVDARKRNPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEPSWDSPWGPGRPGWHIECSAM + +L FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V NNEKMSKSLGNF TIR + ++ HP +R F++S HYRS
Sbjct: 241 QSEAAFGMPFVRYWLHNGFVNINNEKMSKSLGNFLTIRDVLQKVHPETVRFFVLSKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS-----PFQEHGKTARINPAAEDCINKLRD 371
P+++S + A + +Y TL + + FQE + +P D I L
Sbjct: 301 PVDFSDETIGEAEKGLERLYGTLGAVKERAAAGVEEAFQEKALRGQ-DPELFDQIAALSG 359
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M +D NT+ L F + + L+ +KQ K +L R + +++
Sbjct: 360 AFREAMDNDFNTAQALGNLFS-LQRHLQRFLDKFGRKQLKGPASALA---RAGADAIRDH 415
Query: 432 LRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+LGLL P A+ + LK +K LTE +V + IE R AR++K+F+++D++R
Sbjct: 416 ALVLGLLTREPEAFQAEQRSLK---IKSTGLTEAEVERCIELRRQARQDKNFAEADRLRE 472
Query: 490 DLTRKGIALMDMGKETIWR 508
++ +KGI L D T WR
Sbjct: 473 EIEKKGIQLEDSPAGTRWR 491
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/494 (46%), Positives = 312/494 (63%), Gaps = 18/494 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T KE F PI PGKVGMYVCGVT YD H+GHARA V FD++YRYL+
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAKGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TD+DDKII RAN G +S R+ +E+ DMA L PT+QP+ ++H+
Sbjct: 61 EVTYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFDSDMARLMLRIPTFQPKATEHVP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ ++I+ AY DVF+ V++ Y +LS + LE+ +AG R+ VD +K +P D
Sbjct: 121 EIIALVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIEVDDKKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N EKMSKSLGNFFTI+++ ERY LR FL+SAHYRS
Sbjct: 241 QSEAASGKPFVKYWLHNGFVNINAEKMSKSLGNFFTIKEVLERYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A + IY+ L + L+ +HG T E C + + F
Sbjct: 301 PIDFSDQNLKEAELGLERIYKALSGIDERLTAGPDHGATEESAELEEKC-SAIATRFIEA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F D ++ IN +L +S +E L++++ EV + LG
Sbjct: 360 MDDDFNTAMALGHIF-DLVRSINRAL-----------PVSPLELLKRVKEEVARIAATLG 407
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+ P A+ LQ++KD+ E+ E++ LI ERA AR++K+F +SD+IR L K
Sbjct: 408 VCDSVPAAF---LQRMKDRKTSEMEIPVEEIEALIAERAEARRSKNFKRSDEIRDLLLEK 464
Query: 495 GIALMDMGKETIWR 508
I L+D + T W+
Sbjct: 465 DIVLLDTPQGTTWK 478
>gi|392409460|ref|YP_006446067.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390622596|gb|AFM23803.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 480
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/495 (47%), Positives = 317/495 (64%), Gaps = 22/495 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKI+N+MT++KE F P P + GMYVCGVT YD H+GHAR+ V FD+++RYL
Sbjct: 1 MGLKIFNTMTRKKEDFKPRNPNRTGMYVCGVTVYDYCHIGHARSQVLFDIIFRYLMFKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTD+DDKII RAN+L + L+ ++ +E+ VDM L L PT +P+ ++ +
Sbjct: 61 EVTYVRNFTDIDDKIINRANELKIDWKELAEKFVREFYVDMDALGVLRPTREPKATEFIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI+ +I +++ AY V+GDV F+V P YG+LSG++++ +G RV V+ +K+NP D
Sbjct: 121 QIQALIAKLVEGKYAYTVDGDVMFSVASFPEYGKLSGKKVDELMSGARVDVNEKKKNPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSW+SPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENEIA
Sbjct: 181 FALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMFYLGQHFDIHGGGADLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA ++ V+YW+HNG V EKMSKSLGN IR I + HP ALRHFL+++HYRS
Sbjct: 241 QSEAATGETFVNYWVHNGFVNIRAEKMSKSLGNVLNIRDILKTVHPEALRHFLLTSHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS + +S A+ +Y + AL E T+ P + + + F
Sbjct: 301 PLDYSDAFVKESSTALERLYAAM----AALDELIEARGTSDDLPQE---LTGIEERFSEA 353
Query: 377 MSDDLNTSHILTGAFQDALKFIN--SSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR- 433
M DD NT L F+ A + IN S N + K E LR++++ + V R
Sbjct: 354 MDDDFNTPRALAILFE-AARTINRISGTNSVPKP----------ELLREVKDRILHVARE 402
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LG+L +E L++ + ++EE + Q I ERA ARK+K+F+++D+IR +L
Sbjct: 403 VLGILREDQ-TEFLERARKAGAPELGISEELIQQYIVERAEARKSKNFARADEIRNELAS 461
Query: 494 KGIALMDMGKETIWR 508
KGI L D K TIW+
Sbjct: 462 KGIVLEDTPKGTIWK 476
>gi|404494911|ref|YP_006719017.1| cysteinyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418067565|ref|ZP_12704904.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|109894903|sp|Q39ZL8.1|SYC_GEOMG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373558563|gb|EHP84899.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 485
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/494 (45%), Positives = 313/494 (63%), Gaps = 13/494 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN+++ KE FTP+VPG+V MYVCGVT YD H+GHARA V FD++YRYL H
Sbjct: 1 MSLRVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN+TDVDDKII RAN G ++S R+ E+ DMA L PT+QP+ ++H+
Sbjct: 61 DVTYVRNYTDVDDKIINRANQEGVPYNAISERFIAEFDRDMAALGLDLPTHQPKATEHIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+I+++I AY +GDV+F VEK Y +LS + L+ +AG R+ V +KR+P D
Sbjct: 121 EMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEKKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA YW+HNG V N+EKMSKSLGNFFTI+++ E+Y LR FL+SAHYRS
Sbjct: 241 QSEAANGKPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLEKYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A + IY TL + L+ E AE + + F
Sbjct: 301 PIDFSDQNLREAEAGLERIYGTLAGIDENLTKGAEGTAEETDRELAEKAVT-FPERFREA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F + S+ +L + + +L+ R + +++V +LG
Sbjct: 360 MDDDFNTAQALGFVFD----LVRSANRVLGEGKGGGSNRALLAEAR---DRIRKVGAVLG 412
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+ P A++E +LK++ +T E++ +LI ER AAR N+DF ++D+IR L K
Sbjct: 413 IFTSEPRAFAE---RLKNRKAAELPITAEEIERLIAERIAARANRDFKRADEIRDSLAAK 469
Query: 495 GIALMDMGKETIWR 508
GI L+D + T W+
Sbjct: 470 GIMLLDSPQGTTWK 483
>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
Length = 606
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/525 (48%), Positives = 323/525 (61%), Gaps = 40/525 (7%)
Query: 19 LKIYNSMTQQKELFTPIV--PGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
L ++N++T+QKE+F P +V MYVCGVT YD SH+GHARA V+FD++YR L HL
Sbjct: 74 LLLHNTLTRQKEVFRPRADQGNRVSMYVCGVTVYDYSHIGHARAYVAFDVIYRLLRHLGY 133
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYVRNFTDVDDKII RA GE PL+L+ R+ E+ DM L CLPP +PR ++++
Sbjct: 134 AVTYVRNFTDVDDKIIARAAAAGEEPLALARRFIAEFHADMELLGCLPPDLEPRATEYIP 193
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI +II++ AY V GDVFF V P YGRLSG+ E+NRAGERVAVD RKR AD
Sbjct: 194 HMVAMIQRIIDHGHAYAVGGDVFFDVASLPGYGRLSGRSQEDNRAGERVAVDERKRGAAD 253
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEP+W+SPWGPGRPGWHIECSAM L DIHGGG DL+FPHHENE+A
Sbjct: 254 FALWKAAKPGEPTWESPWGPGRPGWHIECSAMIREVLGEVIDIHGGGRDLVFPHHENELA 313
Query: 257 QSCAAC--------------------------QDSNVSYWMHNGHVTNNNEKMSKSLGNF 290
QS AA QD V YW+HNG V ++EKMSKSLGNF
Sbjct: 314 QSRAASGACSCGHDHGAATASASASNGSGGGGQDEFVRYWLHNGFVNVDSEKMSKSLGNF 373
Query: 291 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 350
FTIR++ +YHP ALR FL+ YR P+NY+ L+ ASD VFY+YQTL D L +
Sbjct: 374 FTIREVVAQYHPRALRWFLVGTQYRQPINYTQRALEEASDRVFYLYQTLADMGAVLDGGE 433
Query: 351 EHGKTARINPAAEDCI------NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNM 404
E + L E A ++DD+NT + AF LK N ++
Sbjct: 434 EGQAALAAARQQLAAPAAAASGSGLLAEVQAALTDDVNTP-LAIAAFSAPLKSANDLVHT 492
Query: 405 LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED 464
K K +Q +++L + ++ L++LGL +VL +L+ ALKRA L E++
Sbjct: 493 KKGK----KQAGRLQALAECYAALETCLQLLGLWAEQP-QDVLLELRQLALKRAGLGEDE 547
Query: 465 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 509
+ IEERAAAR KD++ +D +R L GI +MD + T W+P
Sbjct: 548 IAAAIEERAAARAAKDYAAADVVRLRLEAAGILIMDTPQGTTWKP 592
>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/510 (47%), Positives = 325/510 (63%), Gaps = 49/510 (9%)
Query: 25 MTQQKELFTPIVPG--KVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVR 82
MT++KE F P P KV MYVCGVT YD SH+GHAR V+FD+LYR L L +VTYVR
Sbjct: 1 MTRKKEPFAPNDPDDKKVSMYVCGVTVYDYSHIGHARVYVAFDVLYRTLTRLGYDVTYVR 60
Query: 83 NFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMI 142
NFTDVDDKII+RAN+ GE +L R+ + DM+ L CLPPT +PR + H++ I +
Sbjct: 61 NFTDVDDKIIKRANENGEECDALVERFIAAFHEDMSSLGCLPPTMEPRATRHVDDILRVT 120
Query: 143 TQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWK 201
++ AY EG DV+F+V+ P YG+LSG++LE+NRAGERVA+D RK+NPADFALWK
Sbjct: 121 EALVEKGHAYPAEGGDVYFSVDSLPTYGKLSGRKLEDNRAGERVAIDERKKNPADFALWK 180
Query: 202 AAKAGEPSWDSPWGPGRPGWHIECSAM-SAHYLSSKFDIHGGGIDLIFPHHENEIAQS-- 258
A+K GEPSW SPWG GRPGWHIECSAM A + DIHGGG DL+FPHHENE+AQS
Sbjct: 181 ASKPGEPSWASPWGEGRPGWHIECSAMIDATFGGKSIDIHGGGQDLVFPHHENELAQSTA 240
Query: 259 -CAACQDSN--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFL 309
C C D+ V YW+HNG V ++EKMSKSLGNFFTIR++T +Y ALR L
Sbjct: 241 FCGCCDDAKDAKDAPPFVKYWVHNGFVKVDSEKMSKSLGNFFTIREVTAKYDATALRWML 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL 369
+ HYR+ +NY+ L+ ASD ++Y+YQTL + + +TA
Sbjct: 301 LGTHYRAAINYTQRALEEASDRLYYLYQTLSEA-------SDETETA------------- 340
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
A +SDDLNT + + LK +N ++ K K+ + + I +++ + V
Sbjct: 341 ---VGAALSDDLNTP-LAIASLSSPLKLLNDFVSTKKGKKAQGR----IAAMKALVRAVT 392
Query: 430 EVLRILGLLPPGAYS---EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 486
E L +GL P A + +VL++L+ L RA L+ EDV + R AAR+ KDF++SD+
Sbjct: 393 ETLDAVGL--PSAKADAVDVLERLRALTLTRAGLSREDVDAAVAARKAAREAKDFAESDR 450
Query: 487 IRADLTRKGIALMDMGKETIWRPCVLVEQE 516
IR +L KG+ALMD G + +WRP +V +E
Sbjct: 451 IRDELGAKGVALMDGGSQ-VWRPSPVVAEE 479
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9.1|SYC_NITOC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/502 (47%), Positives = 308/502 (61%), Gaps = 32/502 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYNS+T++KE F PI GKV MYVCG+T YDL H+GHAR V FD++ RYL EV
Sbjct: 2 LRIYNSLTRRKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDMVVRYLRASGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ RY Q D A LQ LPP +PR ++ ME I
Sbjct: 62 IYVRNITDIDDKIIHRANERGESIHTLTARYIQALHEDEASLQILPPDREPRATESMEAI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q+++ AY E GD+++ V YG LSG+ LE+ RAGERV V+ K +P DF
Sbjct: 122 LAMVRQLLDQGYAYQGENGDIYYDVSHFEGYGALSGRHLEDLRAGERVQVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK+GEP+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKSGEPAWESPWGPGRPGWHIECSAMSIQELGTHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMHNG V N+EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSP
Sbjct: 242 SEAATGGKFVNYWMHNGFVRLNDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ QLD+A A+ +Y L+ G + + + + R+ M
Sbjct: 302 LNYTKQQLDTAKAAMTRLYTALRGIPRGEDRASAQGLSWEFTDGGDPFVLRFREA----M 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L L + +LN ++ ++ SL LR + ILGL
Sbjct: 358 DDDFNTPEALA-----LLNEVRHALNRAREAGDTEKGQSLAVLLRSLGG-------ILGL 405
Query: 438 LPPGAYSEVLQQLKDK-----------ALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 486
L E Q L+D A + A L+ + + QL+ +R ARKNKD++++D+
Sbjct: 406 LA----HEPEQFLRDSRQVAAIPDTAAAGEEAVLSHDGIEQLVAQRTVARKNKDWAEADR 461
Query: 487 IRADLTRKGIALMDMGKETIWR 508
IR L +GI L D T+WR
Sbjct: 462 IRGILKDQGITLEDTAAGTLWR 483
>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
Length = 466
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/417 (55%), Positives = 287/417 (68%), Gaps = 23/417 (5%)
Query: 117 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 176
MA LQCLPPT +PRV++H+E I ++IT+II N Y +EGDV+F+V+ P Y LSG++L
Sbjct: 1 MAALQCLPPTREPRVTEHIEHIIELITKIIQNGHGYAIEGDVYFSVDSFPEYLLLSGRKL 60
Query: 177 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 236
+ NRAGERVAVD+RKRNPADFALWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL
Sbjct: 61 DQNRAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGHV 120
Query: 237 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 296
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 121 FDIHGGGRDLIFPHHENELAQSRAAYPESEVICWMHNGFVNKDDQKMSKSENNFFTIRDI 180
Query: 297 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 356
YHP+ALR+FLI HYRS +N+S ++ ASD V+YIY+TL DCE LS + E G +
Sbjct: 181 ISLYHPMALRYFLIRTHYRSDVNHSDKAIEKASDRVYYIYKTLYDCEEMLSKYHEEGISV 240
Query: 357 RINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQ 414
+ ++ +N+ R F MSDDL T+ +L G D LK INS++N LKK Q K +Q
Sbjct: 241 PVPAEEQNLVNRHRKAFLDNMSDDLKTTDVLDGEDGLTDLLKAINSNMNDLKKLQQKLEQ 300
Query: 415 L---------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDK 453
I+ L +E E+K+ L +LGL+PP + SEVL QLKDK
Sbjct: 301 QQKKQQQKKQQQKQQQTQKQPEDYIQGLIALETEIKDKLSVLGLMPPSSLSEVLNQLKDK 360
Query: 454 ALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 510
ALKRA LTEE + + IE+R ARKNK F SD+IR L GI+LMD T WRPC
Sbjct: 361 ALKRANLTEEQLQEQIEQRTVARKNKQFEVSDEIRKHLATLGISLMDEPTGTSWRPC 417
>gi|404491639|ref|YP_006715745.1| cysteinyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9.1|SYC_PELCD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/499 (46%), Positives = 315/499 (63%), Gaps = 27/499 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN+MT +KE F P+ PGKVGMYVCGVT YD H+GHARA V FD++YRYL+ +
Sbjct: 1 MSLRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN+TDVDDKII+RAN+ G + +L+ + Q + DM L PT QP+ + H++
Sbjct: 61 DVTYVRNYTDVDDKIIKRANERGISSDTLAGEFIQAFDEDMNRLGLAEPTIQPKATCHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +++ ++I+ AY +GDV+F+VE P+Y +LS + ++ R+G R+ +KRNP D
Sbjct: 121 HIVNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPGEQKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSW+SPWGPGRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+HNG V N EKMSKSLGNFFTIR I + Y P LR F+++AHYRS
Sbjct: 241 QSEGATGKPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILQTYDPEVLRFFILTAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-------EDCINKL 369
P+++S Q LQD + LS F E A AA + L
Sbjct: 301 PIDFSD--------------QNLQDARLGLSRFYEGLHAASEVLAACPPGDVTSEAGATL 346
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
+ F M DD NT+ + G DA++ IN L K + +++++ + +L ++
Sbjct: 347 ENVFREAMDDDFNTAAAI-GHLFDAVRTIN-RLITEKGFRKNREKVAQVRALYDALLKLG 404
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
VL + + P A+ L+Q+ L TE D+ I +R ARKNKDF+++D+IR
Sbjct: 405 GVLGLF-VSDPAAW---LKQMNLAMLATTGYTESDIEDFIRQRQEARKNKDFARADEIRD 460
Query: 490 DLTRKGIALMDMGKETIWR 508
+L KGI L+D + T W+
Sbjct: 461 ELAAKGIQLLDGPQGTAWK 479
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23.1|SYC_DESPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/496 (44%), Positives = 320/496 (64%), Gaps = 18/496 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN+++ +KE PI P V +YVCG+T+YD H+GHAR+A++FD++ RYL +L
Sbjct: 1 MDIRVYNTLSGKKEPLQPIEPNHVKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYLDY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTD+DDKII RAN+ G +L+ R+ E+ DM +L L P +P+ ++H++
Sbjct: 61 KVTFVRNFTDIDDKIIARANETGVTAQALAERFIDEFHTDMDNLGTLRPDIEPKATEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+I ++++ D AY GDV++ V P YG+LSG+ +E+ +AG R++++ +KRNP D
Sbjct: 121 EMIDIIQELVDKDMAYPSAGDVYYVVNSFPEYGKLSGRNIEDMQAGARISINEQKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+K GEPSW+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKASKPGEPSWESPWGPGRPGWHIECSAMSRKYLGENFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + W+H+G VT +EKMSKSLGNF TI+ I + YHP LR F+ S YR+
Sbjct: 241 QSEGANGKPFANTWIHHGFVTIKDEKMSKSLGNFLTIKDILDHYHPEILRAFIFSTQYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA---AEDC--INKLRD 371
PL++S + + A A+ +Y+ L D Q+ K PA A+D +N +
Sbjct: 301 PLDFSEIAMQDAETALVRLYECLHD-------IQQLAKGDPTLPALISAKDAAKLNSIET 353
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M++D NT+ L G DA+K IN + L P + +++ + ++++
Sbjct: 354 RFQEAMNNDFNTALAL-GVLYDAIKIINRAQRALTDT-PSALDVKMLKGSMTL---IQKL 408
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
I+GLL A + LQQ K+K L ++TE ++ I++R AR NKD+++SD+IR L
Sbjct: 409 AGIVGLLQEDA-NLFLQQRKEKMLSGIDITEAEIESYIQQRLDARANKDWARSDEIRDIL 467
Query: 492 TRKGIALMDMGKETIW 507
KGI L D T W
Sbjct: 468 LEKGITLKDGADGTGW 483
>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|189082065|sp|A5G949.1|SYC_GEOUR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/498 (46%), Positives = 313/498 (62%), Gaps = 14/498 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T KE F PI PGKV MYVCGVT YD H+GHARA V FD++YRYL L
Sbjct: 1 MALRVYNTLTGTKEDFVPIEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYLRSLGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YVRN+TD+DDKII RAN G ++S R+ +E+ DMA L L PT QP+ ++H+
Sbjct: 61 EVNYVRNYTDIDDKIINRANREGVAYDAISERFIKEFDRDMAQLGLLLPTSQPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ +I+ AY + GDV F VEK Y +LS + LE+ +AG R+ VD RKR+P D
Sbjct: 121 EIITLVQTLIDKGFAYQMGGDVNFCVEKFDPYLKLSKRNLEDMQAGARIEVDERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK GEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FVLWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N+EKMSKSLGNFFTI+++ ++Y LR FL+SAHYRS
Sbjct: 241 QSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEVLDKYDSEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG----KTARINPAAEDCINK---L 369
PL++S L A + IY+ L + L+ G + + A + +K L
Sbjct: 301 PLDFSDQNLTEAETGMERIYKALVAIDETLASNPATGGEEIDASSLGEAERELFDKSGSL 360
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M DD NT+ + G D ++ +N L+ + K++ +L +++ +
Sbjct: 361 PLRFREAMDDDFNTA-LAMGHIFDLVRCVNRVLS-----EAKERSNTLSALCAQVKANIG 414
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
++ +LG+ S +L +LKD+ +++ E++ +LI ERAAARK KDF +SD+IR
Sbjct: 415 KIADVLGIFTSEPAS-LLTRLKDRKASELDISVEEIERLITERAAARKAKDFKRSDEIRD 473
Query: 490 DLTRKGIALMDMGKETIW 507
L K I L+D + T W
Sbjct: 474 FLLGKNIVLLDSAQGTSW 491
>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|254781681|sp|B9LZV4.1|SYC_GEOSF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/500 (46%), Positives = 313/500 (62%), Gaps = 18/500 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN+++ KE F P+ PGKV MYVCGVT YD H+GHARA V FD++YRY HL
Sbjct: 1 MGLRVYNTLSGNKEEFVPVEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYFCHLGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN+TD+DDKII RAN G +S R+ +E+ DM L PT QP+ ++H++
Sbjct: 61 DVTYVRNYTDIDDKIINRANREGVTYDLISERFIKEFDRDMERLGLKLPTCQPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ +I+ D AY GDV F VEK +Y +LSG+ LE+ +AG R+ VD RKR+P D
Sbjct: 121 EIISLVQTLIDKDFAYQAGGDVNFCVEKFDSYLKLSGRTLEDMQAGARIEVDERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS YL + FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGTTFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V+YW+HNG V N+EKMSKSLGNFFTI+++ +RY LR FL+SAHYRS
Sbjct: 241 QSEAATGKPFVNYWLHNGFVNINSEKMSKSLGNFFTIKEVLDRYDNEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT------ARINPAAEDCINK-- 368
P+++S L A + IY+ L E L+ +G T + +N A + +K
Sbjct: 301 PIDFSDQNLTEAEAGLERIYKALAAVEETLAA--GNGCTGAPVDASSLNEAEGELFDKTT 358
Query: 369 -LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
+ F M DD NT+ + F D ++ +N L+ L + I+ E
Sbjct: 359 SISARFGEAMDDDFNTALAMAHVF-DLVRCVNRVLSETAGASDNICSLCTL-----IKAE 412
Query: 428 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
V ++ +LG+ S L++LK + ++ +++ +LI ER AARK KDF +SD+I
Sbjct: 413 VAKIAGVLGIFSSKPAS-FLERLKSRKAGNLDIAVDEIERLIAERTAARKAKDFKRSDEI 471
Query: 488 RADLTRKGIALMDMGKETIW 507
R L K I L+D + T W
Sbjct: 472 RDQLAAKNIVLLDSQQGTTW 491
>gi|374621461|ref|ZP_09693993.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373940594|gb|EHQ51139.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 460
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/493 (47%), Positives = 306/493 (62%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T++K+ F + PGKV MYVCG+T YD HLGHAR V FD++YRYL+ L EV
Sbjct: 2 LHIYNTLTRRKDPFQSMEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE+ +L++R+ Q D L P+++PR + H+ I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGESIEALTDRFIQAMHEDADALGVARPSFEPRATAHIHDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++ AYV + GDV+++V YG+LSG+R+E+ RAGERVA D KR+P DF
Sbjct: 122 LHMIGTLLRRGFAYVGDNGDVYYSVSLFDGYGKLSGKRIEDLRAGERVAPDESKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+WDSPWGPGRPGWHIECSAMS HYL FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGHHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMHNG V N EKMSKSLGNFFT+RQ+ Y P +R+F++ +HYRSP
Sbjct: 242 SEAASCEHYVNYWMHNGFVRVNEEKMSKSLGNFFTVRQVLAHYRPEEVRYFILGSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L++A A+ +Y L+ ++P G+ A R F A M
Sbjct: 302 LNYSDEPLNNARAALNRLYTALR----GVAPLPSEGEGA-----------PFRSRFDAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L+ F I +N L+ QP E+ ++ ++E+ +LG+
Sbjct: 347 QDDFNTPVALSVLFD-----IAHEVNRLRDSQP--------EAAGRLAGLLREMGGVLGI 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P AY LQ + AE+ LIE R AR+ KDF+++D+IR L +G
Sbjct: 394 LGSDPDAY---LQGGAGEGPDEAEIQ-----TLIEARLEARRRKDFAEADRIRDVLKEQG 445
Query: 496 IALMDMGKETIWR 508
+ L D T WR
Sbjct: 446 VVLEDGPGGTTWR 458
>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254781696|sp|B8GNT5.1|SYC_THISH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 460
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/491 (46%), Positives = 298/491 (60%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T++KE FTP+ PG+V MYVCG+T YD HLGHAR V FD++YRYL+ L +V
Sbjct: 2 LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRA + GE+ +L++R+ D L LPP+ +PR ++H++ +
Sbjct: 62 TYIRNITDIDDKIIRRAAENGEDIRALTDRFIAAMHEDAEALGVLPPSAEPRATEHIDGM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++ AY + GDV++AV K YGRLSG+RLE+ RAGERVA D KR+P DF
Sbjct: 122 LAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+WDSPWGPGRPGWHIECSAMS HYL + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMHNG V N EKMSKSLGNFFT+R++ RY +R+F++S+HYRSP
Sbjct: 242 SEAATCEHFVNYWMHNGFVRVNEEKMSKSLGNFFTVREVLARYPAEVVRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD+A + +Y L+ + ++PA + R F A M
Sbjct: 302 LNYSDEPLDAARAGLTRLYTALRGVQA-------------VDPAGQG--EGYRRRFQAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I LN L+ + P
Sbjct: 347 DDDFNTPVAMAVLFD-----IARELNRLRDEDPAGAAPLAGLLRELGGMLGLLAGDPEAF 401
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L G + +L E + LI +R AARK KDF+++D+IR +L +G+
Sbjct: 402 LKGG--------------EAGDLDEAAIEALIAQRLAARKAKDFAEADRIRDELAGQGVV 447
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 448 LEDGPGGTTWR 458
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/501 (47%), Positives = 306/501 (61%), Gaps = 31/501 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYNS+T++KE F PI PGKV MYVCG+T YDL H+GHAR V FD++ RYL EV
Sbjct: 2 LRIYNSLTRRKEEFVPIEPGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA++ GEN L+ RY + D LQ LPP +PR ++ ME I
Sbjct: 62 TYVRNITDIDDKIIRRAHERGENIQELTARYIEALHEDAEGLQILPPDREPRATESMEAI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +++ AY E GD+++ V YG LSG++L+ RAGERV V K +P DF
Sbjct: 122 IAMVQRLLEQGYAYQGENGDIYYDVSHFEGYGALSGKQLDELRAGERVQVSEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP+WDSPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPNEPAWDSPWGPGRPGWHIECSAMSTQALGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMHNG V ++EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSP
Sbjct: 242 SEAATGCKFVNYWMHNGFVRVDDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ QL++A AV +Y L+ G + + + + F M
Sbjct: 302 LNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQELAEGDDPFVQR----FCEAM 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L L I +LN +++ K + ++ L ++ + + ILGL
Sbjct: 358 DDDFNTPEALA-----LLNEIRHALNRAREEGDKDK----VQYLARL---LPSLGAILGL 405
Query: 438 LPPGAYSEVLQQLKD----------KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
L E Q L+D A A L++ D+ QLI +R AARKNKD++ +D +
Sbjct: 406 LT----QEPEQFLRDPRQAAAPSIVSAEGEAALSDGDIEQLIAQRTAARKNKDWAAADHL 461
Query: 488 RADLTRKGIALMDMGKETIWR 508
R L ++GI L D T+WR
Sbjct: 462 RDVLKKQGITLEDTPTGTLWR 482
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0.1|SYC_GEOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/494 (46%), Positives = 305/494 (61%), Gaps = 18/494 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T KE F PI PGKVGMYVCGVT YD H+GHARA V FD++YR+L
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLLSKGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TD+DDKII RAN G +S R+ +E+ DMA L PT+QP+ ++H+
Sbjct: 61 EVTYVRNYTDIDDKIINRANRDGVAYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +++ ++I+ AY DVF+ V++ Y +LS + LE+ +AG R+ VD RK +P D
Sbjct: 121 EIINLVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N+EKMSKSLGNFFTI++I E Y LR FL+SAHYRS
Sbjct: 241 QSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A + IY+ L + L+ H N + + F
Sbjct: 301 PIDFSDQNLKEAELGLERIYKALAGIDERLAS-GAHTPADADNTEFAEKVAGFAGRFGDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L G D ++ IN L L+E K++ EV ++ +LG
Sbjct: 360 MDDDFNTALAL-GHLFDLVRVINREL--------PTASTGLLE---KVKAEVAKMAAVLG 407
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+ P A+ LQ++KD+ E++ E++ LI ERA ARK K+F + D+IR L K
Sbjct: 408 ICDSVPAAF---LQRMKDRKTSDMEMSAEEIETLIAERAEARKAKNFKRGDEIRDLLLEK 464
Query: 495 GIALMDMGKETIWR 508
I L+D + T W+
Sbjct: 465 NIVLLDSAQGTTWK 478
>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
Length = 495
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/501 (46%), Positives = 306/501 (61%), Gaps = 20/501 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYNS+T++KE F PI GKV MYVCG+T YDL H+GHAR V FD++ RYL EV
Sbjct: 2 LRIYNSLTRKKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE+ +L+ RY Q D A LQ LPP +PR ++ ME I
Sbjct: 62 MYVRNITDIDDKIIHRANEKGESIHALTARYIQALHEDEASLQILPPDREPRATESMEAI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q++ AY E GD+++ V YG LSG+ LE+ RAGERV V+ K +P DF
Sbjct: 122 LAMVRQLLEQGYAYQGENGDIYYDVSHFEGYGALSGKHLEDLRAGERVQVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP+W+SPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPAWESPWGPGRPGWHIECSAMSIQELGVHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMHNG V ++EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSP
Sbjct: 242 SEAATGSKFVNYWMHNGFVRLDDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS QLD+A A+ +Y L+ G + + I + R+ M
Sbjct: 302 LNYSKQQLDTAKAAMTRLYTALRGIPRGDDRASAQGLSWEFVDGEDPFILRFREA----M 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK-------IENEVKE 430
DD NT L L + +LN +K ++ SL LR + +E ++
Sbjct: 358 DDDFNTPEALA-----LLNEVRHALNRARKGGDTEKGQSLAVLLRALGGILGLLAHEPEQ 412
Query: 431 VL---RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
L R + ++ A + L + ++ L+ + + QL+ +R ARKNKD++++D+I
Sbjct: 413 FLRDPRQMVVVSDTAKTTSLSLTSQTSTEKVVLSHDGIEQLVAQRTVARKNKDWAEADRI 472
Query: 488 RADLTRKGIALMDMGKETIWR 508
R L +GI L D T+WR
Sbjct: 473 RGILKDQGITLEDTAAGTLWR 493
>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|109894958|sp|Q31H54.1|SYC_THICR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 456
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/493 (47%), Positives = 310/493 (62%), Gaps = 40/493 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FTPI P KVG+YVCGVT YD H+GHAR V FD + R+L L
Sbjct: 1 MALKIYNTETRQKETFTPIQPNKVGLYVCGVTVYDYCHVGHARVMVVFDTVVRHLRSLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKII+RA + E+ SL++R+ D L L P +P+ +++M+
Sbjct: 61 DVTYVRNITDIDDKIIQRALENKESIQSLTSRFIDAMHEDEKALNVLRPDMEPKATEYMD 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I+ MI+ +I D AY E GDV+F V+ +YGRLSG+ +E +G RV ++S K++P
Sbjct: 121 EIETMISTLIEKDFAYPAENGDVYFHVKADDDYGRLSGKNIEELDSGSRVEINSVKKDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+K EP+W SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKASKENEPAWQSPWGDGRPGWHIECSAMSTKCLGNHFDIHGGGLDLSFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + V+ WMH G V ++EKMSKSLGNFFTIR++ ++YHP +R+FL+++HYR
Sbjct: 241 AQSECATGEHYVNSWMHCGFVRIDDEKMSKSLGNFFTIREVLKQYHPEVIRYFLLASHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS LD A +V +Y L+ L P + AE +KL EF A
Sbjct: 301 SPVNYSEENLDVAKASVGRLYSALE-----LVPADQ----------AEPAESKLEAEFMA 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F+ L K+ KQ+ L L+K+ N++
Sbjct: 346 AMNDDFNTPQAMAVLFE------------LAKEVNKQKSPGLAALLKKLANQI------- 386
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL A S Q D ++LT+E + LI ERA ARK KDFS+SD+IR +L +G
Sbjct: 387 GLLEQTAESFFKSQPSD-----SDLTDEMIEALIVERAEARKAKDFSRSDEIRDELLAQG 441
Query: 496 IALMDMGKETIWR 508
I L+D + T WR
Sbjct: 442 IELLDSAEGTSWR 454
>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|61216254|sp|Q747A2.1|SYC_GEOSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
Length = 481
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/494 (45%), Positives = 304/494 (61%), Gaps = 17/494 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN+++ KE F + PG+V MYVCGVT YD H+GHARA V FD++YRYL H
Sbjct: 1 MALRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TDVDDKII RAN G +S R+ E+ DMA L PTYQP+ ++H+
Sbjct: 61 EVTYVRNYTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I +++ AY +GDV+F+VE Y +LS + LE +AG R+ V +KR+P D
Sbjct: 121 EMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEKKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA YW+HNG V N EKMSKSLGNFFTI+++ E Y LR FL+SAHYRS
Sbjct: 241 QSEAANGKPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A+ + IY L + A++ + RI+ + L F
Sbjct: 301 PIDFSDQNLKEAAAGLERIYNALAGIDEAVAA--DGTGAGRIDEELAEKAAGLPTRFREA 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F D ++ +N L + +++ S R+ + V +LG
Sbjct: 359 MDDDFNTAQALGYVF-DLVRAVNRVL------AEGEIDRAVLASARE---AIDRVGAVLG 408
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
L PGA+ E L+ K AL + ++ +LIEER AARK +DF ++D+IR L +
Sbjct: 409 LFTSEPGAFVERLKSRKAAALP---IEAAEIERLIEERNAARKARDFRRADEIRDTLAAQ 465
Query: 495 GIALMDMGKETIWR 508
GI L+D + T W+
Sbjct: 466 GILLLDSAQGTTWK 479
>gi|451947839|ref|YP_007468434.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451907187|gb|AGF78781.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 489
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 311/493 (63%), Gaps = 11/493 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +KIYN++T++KEL PI PG + +YVCG+T+YD H+GHAR+A++FD++ RYL +
Sbjct: 1 MPVKIYNTLTRKKELLKPIEPGHIKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYRGN 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTY+RNFTD+DDKII RA + G L+NR+ E+ VDM L PT +P+ ++H++
Sbjct: 61 KVTYIRNFTDIDDKIIARAEEQGTTTEELANRFIDEFYVDMDRLGVDRPTMEPKATEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+++++I+ AY GDV++ V YG+LSG+ L++ +AG RV+V+ K +P D
Sbjct: 121 EMIDLVSELIDKGMAYPAGGDVYYKVHSFDGYGKLSGRNLDDMQAGARVSVNENKTDPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F +WKA+K GEPSWDSPWGPGRPGWHIECSAMS YL S FDIHGGG DLIFPHHENE+A
Sbjct: 181 FVMWKASKPGEPSWDSPWGPGRPGWHIECSAMSRKYLGSTFDIHGGGQDLIFPHHENELA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+ W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S YR+
Sbjct: 241 QSEGANNKPFVNMWIHHGFVTIRDEKMSKSLGNFLTIRDILAHYHPEVLRFFIFSTQYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC--INKLRDEFH 374
PL++S + A + +Y+ + C+ + H +A I +D I L + F
Sbjct: 301 PLDFSEAAMQDAMTGLDRLYECIAACDALGTA---HSDSAEIVATPKDIKKIESLEERFQ 357
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M +D NT+ F+ +K IN + L P S L+ ++ ++ I
Sbjct: 358 KAMDNDFNTAQAQASLFE-TVKVINKIIQQL----PDVPATSDYNLLKSGSADIVKLAAI 412
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+G++ A +E L K L +++E ++L LI ER AR +K++++SD+IR +L +
Sbjct: 413 MGIVQENA-AEYLAHKKAAMLAETDISEAEILALIAERNQARTDKNWTRSDEIRDELLDR 471
Query: 495 GIALMDMGKETIW 507
GI L D + T W
Sbjct: 472 GIELKDGPEGTGW 484
>gi|409913806|ref|YP_006892271.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 481
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/494 (45%), Positives = 304/494 (61%), Gaps = 17/494 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN+++ KE F + PG+V MYVCGVT YD H+GHARA V FD++YRYL H
Sbjct: 1 MALRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TDVDDKII RAN G +S R+ E+ DMA L PTYQP+ ++H+
Sbjct: 61 EVTYVRNYTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I +++ AY +GDV+F+VE Y +LS + LE +AG R+ V +KR+P D
Sbjct: 121 EMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEKKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA YW+HNG V N EKMSKSLGNFFTI+++ E Y LR FL+SAHYRS
Sbjct: 241 QSEAANGKPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S L A+ + IY L + A++ + RI+ + L F
Sbjct: 301 PIDFSDQNLKEAAAGLERIYNALAGIDEAVAA--DGTGAGRIDEELAEKAAGLPTRFREA 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F D ++ +N L + +++ S R+ + V +LG
Sbjct: 359 MDDDFNTAQALGYVF-DLVRAVNRVL------AEGEIDRAVLASARE---AIDRVGAVLG 408
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
L PGA+ E L+ K AL + ++ +LIEER AARK +DF ++D+IR L +
Sbjct: 409 LFTSEPGAFVERLKSRKAAALP---IEAAEIERLIEERNAARKAQDFRRADEIRDTLAAQ 465
Query: 495 GIALMDMGKETIWR 508
GI L+D + T W+
Sbjct: 466 GILLLDSAQGTTWK 479
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/494 (46%), Positives = 298/494 (60%), Gaps = 39/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+NS+TQ+KE F PI PG V MYVCG+T YD HLGHARA V FD++ RYL HL V
Sbjct: 25 LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGYRV 84
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKIIRRA +LGE +++ R+ + D L LPP ++PR + H++ I
Sbjct: 85 TFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDI 144
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AYV + GDV+FAV P YG+LSG+R E+ RAG RV VD KR+P DF
Sbjct: 145 IAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRDPVDF 204
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAA+ GEP+W SPWG GRPGWHIECSAMS L FDIHGGG+DL FPHHENEIAQ
Sbjct: 205 ALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPHHENEIAQ 264
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNGHV N+EKM+KSLGNFFT+R++ + A+R FL+S+HYRSP
Sbjct: 265 SECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLFLLSSHYRSP 324
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ L A A+ +Y L+ A P E R FHA M
Sbjct: 325 LNYSLDGLRQAQGALERLYLALRGLPEA--------------PVPEADPQGFRARFHAAM 370
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + +N L++ + LR + +LGL
Sbjct: 371 DDDFNTPEALAVLFE-----LAREVNRLRQGDDDAGAAAPGALLRVLGG-------VLGL 418
Query: 438 LPPGAYSEVLQQLKDKALKRAELT---EEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LQ ++ L+ + + ++ L+ R ARKN+DF+++D+IR +L +
Sbjct: 419 ---------LQDDPERFLRGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAER 469
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 470 GIILEDGPQGTTWR 483
>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 550
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/504 (44%), Positives = 314/504 (62%), Gaps = 24/504 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN++ +KE+FTPI G+VG+YVCG+T YD+ H+GHAR+AV FD+L RYLE+
Sbjct: 57 MSLKLYNTLNNKKEVFTPIREGRVGLYVCGITVYDVCHVGHARSAVVFDVLKRYLEYRGY 116
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTY++NFTDVDDKII RAN G + ++NRY + DM L L PT PR ++H+
Sbjct: 117 EVTYIKNFTDVDDKIIARANAEGVSISEIANRYIASHDKDMDRLGVLRPTVTPRATEHIG 176
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I+++ AY V+G+V++AVE+ P YG+LSG++LE+ AG R+ V+ K NP D
Sbjct: 177 EMIELISKLQKRGLAYAVDGNVYYAVERFPGYGKLSGRKLEDMMAGARIDVNEHKNNPMD 236
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+K EP+WDSPWGPGRPGWHIECS MS YL FDIHGGG DL+FPHHENEIA
Sbjct: 237 FALWKASKPNEPAWDSPWGPGRPGWHIECSVMSQKYLGDTFDIHGGGEDLVFPHHENEIA 296
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS + W+HNG V N+EKMSKSLGN FTI+++ RYH +R F++ +HYRS
Sbjct: 297 QSEGVTGKPLANIWIHNGFVKINSEKMSKSLGNVFTIQEMLTRYHAEVIRLFMLQSHYRS 356
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVAL----------SPFQEHGKTARINPAAEDCI 366
+++S L A + Y TL+ + L SP GKTA + +
Sbjct: 357 AVDFSEESLSEARQGMDRFYGTLKAIQEVLAVAEEEASPISPETLTGKTAELYAH----V 412
Query: 367 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
L D F M DDLNT+ + G DA + IN + K + K+ L + + I
Sbjct: 413 QGLPDRFVEAMDDDLNTARAI-GYLFDAARQINGFIRDAKMAKSKEGWKVLALAGKSI-- 469
Query: 427 EVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
K++ +LGL P Y Q +++ +++ L ++ LI +R AAR +KD+ K+
Sbjct: 470 --KDLGYVLGLFQENPDVY---FLQDREREIRKRGLEPAEIELLIADRWAARNDKDWHKA 524
Query: 485 DQIRADLTRKGIALMDMGKETIWR 508
D+IR LT KGI L D T W+
Sbjct: 525 DEIRQLLTEKGIVLKDTPTGTTWK 548
>gi|187631658|sp|Q0A7N3.2|SYC_ALHEH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 462
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/494 (46%), Positives = 298/494 (60%), Gaps = 39/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+NS+TQ+KE F PI PG V MYVCG+T YD HLGHARA V FD++ RYL HL V
Sbjct: 2 LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGYRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKIIRRA +LGE +++ R+ + D L LPP ++PR + H++ I
Sbjct: 62 TFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AYV + GDV+FAV P YG+LSG+R E+ RAG RV VD KR+P DF
Sbjct: 122 IAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRDPVDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAA+ GEP+W SPWG GRPGWHIECSAMS L FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 ALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNGHV N+EKM+KSLGNFFT+R++ + A+R FL+S+HYRSP
Sbjct: 242 SECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ L A A+ +Y L+ A P E R FHA M
Sbjct: 302 LNYSLDGLRQAQGALERLYLALRGLPEA--------------PVPEADPQGFRARFHAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + +N L++ + LR + +LGL
Sbjct: 348 DDDFNTPEALAVLFE-----LAREVNRLRQGDDDAGAAAPGALLRVLGG-------VLGL 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELT---EEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LQ ++ L+ + + ++ L+ R ARKN+DF+++D+IR +L +
Sbjct: 396 ---------LQDDPERFLRGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAER 446
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 447 GIILEDGPQGTTWR 460
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/491 (46%), Positives = 310/491 (63%), Gaps = 32/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+NS+T+QK+ FTPI PGKV +YVCG+T YD H+GHAR + FD++ RYL L EV
Sbjct: 2 LTIHNSLTKQKDPFTPIEPGKVRLYVCGMTVYDYCHVGHARVMIVFDVVVRYLRSLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ GE+ L++R+ Q D L + P +PR + + +I
Sbjct: 62 TYVRNITDIDDKIIQRANENGEDINQLTDRFIQAMYEDTDALNVIRPDIEPRATQSIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ + AY+ + GDV +A+++ NYG+LSG+ L++ RAGERV V+ K++P DF
Sbjct: 122 VAMIQSLLDKNYAYLTDNGDVCYAIQRFENYGQLSGKHLDDLRAGERVEVNESKQHPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW+SPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPSWESPWGAGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A ++ V+ WMHNG V N+EKMSKSL NFFT+R++ ERY P +R+F++++HYRS
Sbjct: 242 SEGATGETFVNVWMHNGFVRINDEKMSKSLNNFFTVREVLERYQPEVVRYFILTSHYRSE 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS +L++A ++ +Y ++D P + P +D N+ F M
Sbjct: 302 LNYSEQELEAAKQSITRLYIAIRDL-----PNTDE-------PCPDDSYNQ---RFLTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L F ++ +N+L++K+ + + L E L L
Sbjct: 347 NDDFNTPEALAALFS-----LSKEINILRRKK-VSEAIPLAS-----ELRRLGNLLGLLQ 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P + + Q K+ L E+ QLI ER ARKN+DF+ +DQIRADLT KGI
Sbjct: 396 AKPETFLQGTSQEKEPGLSVTEIE-----QLIVERIDARKNRDFATADQIRADLTAKGII 450
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 451 LEDNAQGTSWR 461
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6.1|SYC_GEOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/500 (46%), Positives = 302/500 (60%), Gaps = 30/500 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L++YN++T KE F PI PGKVGMYVCGVT YD H+GHARA V FD++YR+L
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLRSKGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN+TD+DDKII RAN G +S R+ +E+ DMA L PT+QP+ ++H+
Sbjct: 61 EVTYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ +I+ AY DVF+ V++ Y +LS + LE+ +AG R+ VD RK +P D
Sbjct: 121 EIIALVQTLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG V N+EKMSKSLGNFFTI++I E Y LR FL+SAHYRS
Sbjct: 241 QSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC------INKLR 370
P+++S L A + IY+ AL+ E + PA D +
Sbjct: 301 PIDFSDQNLKEAELGLERIYK-------ALAGIYERLASGANTPAGADNAEFVEKVAGFA 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
F M DD NT+ L G D ++ IN L L+E + EV +
Sbjct: 354 GRFGDAMDDDFNTALAL-GHLFDLVRVINREL--------PTASTGLLEQAKA---EVAK 401
Query: 431 VLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
+ +LG+ P A+ LQ++KD+ E++ E++ LI ERA ARK K+F + D+IR
Sbjct: 402 MAAVLGICDSVPAAF---LQRMKDRKTSDIEMSAEEIEALIAERAEARKAKNFKRGDEIR 458
Query: 489 ADLTRKGIALMDMGKETIWR 508
L K I L+D + T W+
Sbjct: 459 DLLLEKNIVLLDSAQGTTWK 478
>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 459
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 293/493 (59%), Gaps = 37/493 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L +YN++ ++KE F PI PG +GMYVCGVT YD H+GHAR + FD++YR+L H
Sbjct: 1 MSLMLYNTIKREKEAFVPIRPGHIGMYVCGVTVYDYCHVGHARVMIVFDVIYRWLMHSGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRNFTDVDDKII+RA + G +L+N + D L CL PT++PR + HM+
Sbjct: 61 DVDYVRNFTDVDDKIIKRAAERGIAIDALTNEMIDAFHADADALGCLRPTHEPRATAHMD 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI ++ D AYV E GDV +AV +YG+LSG++++ +G RV VD KR+P
Sbjct: 121 AMISMIQALMEKDMAYVSESGDVLYAVRGFSDYGQLSGKKIDELESGSRVDVDQSKRDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AKA EP+W SPWG GRPGWHIECSAMS +L FDIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKMAKADEPAWASPWGQGRPGWHIECSAMSCGHLGDTFDIHGGGMDLKFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQ+ AA YW+HNG V N EKMSKSLGNFFTIR++TERYHP LR F++ HYR
Sbjct: 241 AQARAANGGGFARYWLHNGFVNINAEKMSKSLGNFFTIREVTERYHPEVLRMFMLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++S LD A + +Y+T + C QE G T A L F
Sbjct: 301 SPLDFSDAALDVAKSGLDRLYKTAKRC-------QESGVTGAGGQAL------LPHHFTT 347
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F D + +N LN + Q + + +L L
Sbjct: 348 AMDDDFNTPEALAVLF-DTSRALNKGLNEAQDVTALAGQFTAMSAL-------------L 393
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G ++QQ + ++ + LIEER ARKN+DF+++D IR +L+ +G
Sbjct: 394 G---------IVQQDTAIWFQSGDVDAAAIEALIEERLQARKNRDFARADAIRNELSAQG 444
Query: 496 IALMDMGKETIWR 508
I L D T W+
Sbjct: 445 IVLEDSASGTTWK 457
>gi|335043568|ref|ZP_08536595.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333790182|gb|EGL56064.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 463
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/494 (45%), Positives = 312/494 (63%), Gaps = 38/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE+F P+ GKV MYVCG+T YDL H+GHAR V FD++ RYL L +V
Sbjct: 2 LKIYNSLTRQKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE+ +L+ RY E D L L P +P+ ++ M +I
Sbjct: 62 TYVRNITDIDDKIIKRAAENGESIQALTERYIDEMHKDADALGVLRPDIEPKATESMTEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY + GDV++ V + YG+LSG+ +E+ RAGER+AV+ K +P DF
Sbjct: 122 LAMIETLISKGLAYKADNGDVYYDVSQFNGYGKLSGRNIEDLRAGERIAVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMSAH L +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGEGRPGWHIECSAMSAHCLGEQFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A +V+YWMHNG V ++EKMSKSLGNFFT+R++ E+Y A+R+F++S+HYRSP
Sbjct: 242 SEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLEQYPAEAIRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ QL+ A A+ Y TL++ + T ++N ++ + F A M
Sbjct: 302 LNYAEDQLEQAKAALTRFYTTLREVDT----------TQKVNWQDDE---EFGGRFKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ L+ D + IN + ++Q + + ++ + L + +LGL
Sbjct: 349 DDDFNTALALS-VMADVRQAINKA-----REQAQSEAVAYLAGL------LSSFGDVLGL 396
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE---DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
QQ DK L +++ D+ L+ ER AR +K+++++D+IR LT
Sbjct: 397 ---------FQQDADKFLTGDSSSDQLAVDIDSLVAERNQARADKNWARADEIRDQLTEM 447
Query: 495 GIALMDMGKETIWR 508
GI L D +T WR
Sbjct: 448 GIVLEDAAGKTSWR 461
>gi|224369425|ref|YP_002603589.1| protein CysS2 [Desulfobacterium autotrophicum HRM2]
gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
Length = 477
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/496 (44%), Positives = 308/496 (62%), Gaps = 25/496 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+ T+ KE F P+ KV MYVCG T YD SH+GHAR+ V FD+++R+L H
Sbjct: 1 MSLRIYNTQTRTKETFIPLEKNKVKMYVCGPTVYDTSHIGHARSVVVFDVVFRWLRHSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRNFTDVDDKII RAN+LG++P +S RY +E+ +M L L PT +P+ ++H++
Sbjct: 61 DVCYVRNFTDVDDKIINRANELGQDPKEISERYIKEFHNEMDALNVLRPTIEPKATEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I D I ++I+ AY V G DVFF+++ YG+LSG+ ++ G R+AVD +KR+P
Sbjct: 121 DIIDFIQRLIDKGKAYHVPGSDVFFSIQSFDEYGKLSGRNPDDMMPGSRIAVDDKKRDPK 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEI
Sbjct: 181 DFTLWKPVKPGEPSWPSPWGDGRPGWHIECSAMSYKYLGESFDIHGGGKDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + V YW+HNG V NNEKMSKSLGNF I+ + + YHP +R FL+S HYR
Sbjct: 241 AQSEAAFGKTFVRYWIHNGFVDINNEKMSKSLGNFTMIKDVLKDYHPEVMRMFLLSKHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR-INPAAEDCINKLRDEFH 374
SP++Y+ +D + +Y ++ + A G T + P E F
Sbjct: 301 SPIDYNDTSMDEVISGLDRLYAFVERAQGA-------GATVNGVEPGKEWA------SFE 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + F D +K N L+ +Q + + ++ + ++K + I
Sbjct: 348 AAMDDDFNTARAMATLF-DTVKTGNRILD----QQGETVSPETLSAVSTLCADLKRMGSI 402
Query: 435 LGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
LG+L P Y + K+ L +L + + +LI+ER AAR++K+F+++D+IRA+L
Sbjct: 403 LGILAQEPQDY---FRAKKESGLAGKDLDGDAIERLIQERVAARQSKNFARADEIRAELD 459
Query: 493 RKGIALMDMGKETIWR 508
I L D T W+
Sbjct: 460 AMNIVLEDGPDGTTWK 475
>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
Length = 483
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/499 (45%), Positives = 303/499 (60%), Gaps = 28/499 (5%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
T+++YN+MT++KE F P+ PGKVG+YVCGVT Y+ H+G+AR V +D+++R+LEH +
Sbjct: 3 TIRVYNTMTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VT+V+NFTDVDDKIIR AN G ++NRY + Y M L PRVSDH+
Sbjct: 63 VTHVQNFTDVDDKIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHIPD 122
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I + Q+I++ YVV+GDV++ VEK +YG LSG+ L++ AG RV VD RK NP DF
Sbjct: 123 IIHTVQQLIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDERKENPMDF 182
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEPSWDSPWG GRPGWHIECS MS YL S FD HGGG DLIFPHHENEIAQ
Sbjct: 183 ALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPHHENEIAQ 242
Query: 258 S-CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
S A C V YW+HNG +T N EKMSKSLGNFFT+ I + Y P LR+F++ HYRS
Sbjct: 243 SEGATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRYFILQTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-----AAEDCINKLRD 371
PL++S +L AS ++L+ A E + P A + ++ +
Sbjct: 303 PLDFSDARLKEAS-------RSLERLRTAAQNLTELKGVISVGPDEDSLALREKVSGFVE 355
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NTS ++ F + +N+L + Q + + ++ KE+
Sbjct: 356 SFLEAMRDDFNTSLAISYLFA-----LGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEM 410
Query: 432 LRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
I+G+L PGA +E A+K A+ + LI ER ARK KDF K+D IR
Sbjct: 411 TSIIGILEEDPGAKTE--------AVKDADEDAAAIESLIAERQEARKAKDFKKADAIRD 462
Query: 490 DLTRKGIALMDMGKETIWR 508
+L +KGI L D + W+
Sbjct: 463 ELAQKGILLEDTPQGVRWK 481
>gi|406912438|gb|EKD52050.1| hypothetical protein ACD_62C00126G0006 [uncultured bacterium]
Length = 530
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/489 (44%), Positives = 310/489 (63%), Gaps = 27/489 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KE F P+ GKVGMY CGVT YD HLG+ARA V+FD+L+RYL+++ +V
Sbjct: 49 LTLYNTLTRKKEEFKPLTDGKVGMYACGVTVYDYCHLGNARAMVNFDVLHRYLKYVGYDV 108
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKIIR+AN + ++++Y + D L + PT +PR +DH+ I
Sbjct: 109 TFVRNFTDVDDKIIRKANAENISCSEVTSKYIAAFYEDTNALGLVNPTIEPRATDHIPDI 168
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++++ AY + GDVF+AV P YG+LSG+ +E+ +G RV V K++P DFA
Sbjct: 169 IAIINKLVDKGLAYQIGGDVFYAVRSFPQYGKLSGKNIEDLESGARVDVSDVKKDPLDFA 228
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK EP W SPWG GRPGWHIECSAMS YL FDIH GG DLIFPHHENEIAQS
Sbjct: 229 LWKSAKPNEPKWPSPWGEGRPGWHIECSAMSTKYLGDTFDIHCGGCDLIFPHHENEIAQS 288
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +W+HNG + ++EKMSKSLGNFFT R++ +++ A+RHF++SAHYRSP+
Sbjct: 289 EGATGKPFARFWVHNGFLNIDSEKMSKSLGNFFTTREVLKKFPAEAIRHFILSAHYRSPI 348
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-------PFQEHGKTARINPAAEDCINKLRD 371
+YS + + A+ YQT E + P Q+H PA + L++
Sbjct: 349 DYSEKNISDSIKALERFYQTKSRLEKFIQQPSDPAIPSQQH------VPAK---LENLKN 399
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
EF + DDLNT+ ++ F+ ++ + ++ + + Q+ + I N++ +V
Sbjct: 400 EFIMALDDDLNTAMVMGLVFE----WVRTWNKLIDENRANQKD---AKDFLDIINDIHKV 452
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
L + G AY L +LK K + + EED+L+LIEER ARKN+DF +SD+IR L
Sbjct: 453 LGVFG-SDANAY---LDELKQKGMAGLLVLEEDILKLIEERKLARKNRDFKRSDEIRDQL 508
Query: 492 TRKGIALMD 500
++GI L D
Sbjct: 509 LKQGITLKD 517
>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|61216155|sp|Q60BG8.1|SYC_METCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 465
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/493 (48%), Positives = 298/493 (60%), Gaps = 34/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F P+ P +V MYVCG+T YD HLGHAR V FD++ RYL HL +V
Sbjct: 2 LKIYNSLTRQKEEFRPLEPRRVRMYVCGMTVYDYCHLGHARVMVVFDMVARYLRHLGLKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE +L+ R+ + D L LPP ++PR ++ ++ I
Sbjct: 62 TYVRNVTDIDDKIIRRAVENGETIGALTARFIEAMHEDERALGVLPPDHEPRATESIDDI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV GDVF+AV PNYGRLSG+ L+ RAGER+ VD KR+P DF
Sbjct: 122 LAMIGTLIERGHAYVGSNGDVFYAVASFPNYGRLSGKNLDELRAGERIEVDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP W SPWGPGRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPFWASPWGPGRPGWHIECSAMSTRCLGAHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V N EKMSKSLGNFFT+R+I RY P +R F++++HYRSP
Sbjct: 242 SEGATGEHFVNYWMHNGFVRINEEKMSKSLGNFFTVREILARYRPEVVRFFILNSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A+ A+ +Y L+ L P P ED F M
Sbjct: 302 LNYSDENLDEAAAALSRLYTALRGLAPDL-PL----------PLGEDRDEGFSSRFADAM 350
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D + IN K + +L +L+ + N +LGL
Sbjct: 351 QDDFNTPEAIAVLF-DLAREINR-----HKAAEPAKAAALGATLKSLGN-------VLGL 397
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P AY K A + L++ D+ I R ARK K++++SD+IR +L +G
Sbjct: 398 LQTDPEAY------FKSDA-GGSGLSDADIETRIRARLEARKAKNWAESDRIRDELKAQG 450
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 451 IILEDSAAGTTWR 463
>gi|386392194|ref|ZP_10076975.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
gi|385733072|gb|EIG53270.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
Length = 485
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/490 (45%), Positives = 296/490 (60%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+M + KE F +PGKV MYVCG+TAYDL H+GHAR++V FD+L RYL HL EV
Sbjct: 1 MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++AN G ++ RY + DM L L +PR ++++ ++
Sbjct: 61 TFVRNFTDVDDKIIKKANSEGATSAEIAERYIAAFYEDMDRLGILRADAEPRATEYIAEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM ++I N AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DF
Sbjct: 121 ADMAARLIENGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP WDSP+GPGRPGWH+ECS MS L DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + +W+HNG V N EKMSKSLGNF TIR I +RY P LR FL+S+HYRSP
Sbjct: 241 SEAATGNDFCRFWVHNGFVRINTEKMSKSLGNFVTIRDIYKRYLPEVLRFFLVSSHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + IY E AL+ + R+ P + KL + F A M
Sbjct: 301 LDYSDQALDEAEKGIKRIYAAKGQMEQALA--RAKWSETRLPPEIGQELAKLEEGFTAAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ + F + + +L K + + E+LR+I ++ ILG+
Sbjct: 359 DDDLNTAQAIGHVF----GLVRLAGRVLDDKTLAKSR-EAAEALRRILADLDTWSGILGV 413
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ E L +LK L R + V L+ ER ARK KDF++SD IR +L G+
Sbjct: 414 FGRDS-REFLAELKASRLARLGIDAVRVDGLVAERQEARKTKDFARSDAIRDELAGLGVT 472
Query: 498 LMDMGKETIW 507
+MD W
Sbjct: 473 VMDTPAGPQW 482
>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 469
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/498 (47%), Positives = 299/498 (60%), Gaps = 43/498 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYNS+T +KE F PI PG+V MYVCG+T YD HLGHARA V FD + RYL V
Sbjct: 2 LYIYNSLTNRKEPFRPIEPGRVRMYVCGMTVYDYCHLGHARAMVVFDTVVRYLRSAGYRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA +LGE L+ R+ D A L CL P +PR + +M+ I
Sbjct: 62 DYVRNITDVDDKIIRRAAELGEPVNVLTERFIAAMHADTAALGCLLPDAEPRATAYMDAI 121
Query: 139 KDMITQIINNDCAY--VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++++ AY V EG +++AVE+ YGRLSG+RLE RAG RV + KR+ AD
Sbjct: 122 VALIQRLLDRGYAYQAVDEGSIYYAVERFEGYGRLSGERLEALRAGARVEPGAGKRDAAD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEPSW +PWG GRPGWHIECSAM+ L FDIHGGG+DL FPHHENEIA
Sbjct: 182 FVLWKAAKPGEPSWPAPWGEGRPGWHIECSAMAGACLGQHFDIHGGGLDLKFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V++WMHNGH+ N+EKMSKSLGNFFT+R++ + Y +R+FL+S+HYRS
Sbjct: 242 QSEAAWGGRYVNFWMHNGHIRINDEKMSKSLGNFFTVREVLQVYRAEEIRYFLLSSHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNYS LD++ A+ +Y L+D PF E A+ R+ F
Sbjct: 302 PLNYSTSDLDNSRAALERLYLALRDL-----PFTE---------ASPALAAPYREAFRQA 347
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE------VKE 430
M DD NT L F D + IN ++ + + Q +L +LR++ E
Sbjct: 348 MDDDFNTPLALAVLF-DLAREINR-----RRDRFESQAAALAATLRELGGLLGLAQVAPE 401
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
V L GA S V + E V L+ ERA ARKN+DF+ +D+IR +
Sbjct: 402 V-----FLKGGAGSSVA----------VGIASERVEALLAERALARKNRDFATADRIRDE 446
Query: 491 LTRKGIALMDMGKETIWR 508
L +GIAL D + T WR
Sbjct: 447 LQAQGIALEDTPQGTAWR 464
>gi|345862869|ref|ZP_08815083.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126211|gb|EGW56077.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 461
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/493 (45%), Positives = 303/493 (61%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN + +KE F P+ G+V MYVCG+T YDL HLGHAR V FD++YRYL+ + EV
Sbjct: 2 LKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYRYLKAMGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKII RAN+ GE ++L+ R+ Q D L LPP +PR + HM++I
Sbjct: 62 TYIRNITDIDDKIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEPRATGHMKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY VE GDV++ V P+YG+LSG+ +++ +G RV VD KR+P DF
Sbjct: 122 LVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSGKSIDDLESGARVEVDEIKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP+WDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A S V YWMHNG V N+EKMSKSLGNFFT+R+I +RY +R+F++++ YRSP
Sbjct: 242 SEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYFILTSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L++A A+ Y L+ + + PA + + FHA M
Sbjct: 302 LNYDEEHLENARAALTRFYTALRGLD-------------EVEPAGGEA---FIERFHAVM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F D ++ IN + + + + E++++ +LG+
Sbjct: 346 DDDFNTPEALAVLF-DMVREIN------------RLRETGAAKAAGLGAELRQLGGVLGI 392
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P AY LK L++ D+ LI++R AR K+++++D+IR +L G
Sbjct: 393 LQDDPEAY------LKGGVGAEGGLSDADIDALIQQRLDARAEKNWAEADRIRDELQAAG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 ILLEDGPQGTSWR 459
>gi|408418553|ref|YP_006759967.1| cysteinyl-tRNA synthetase CysS [Desulfobacula toluolica Tol2]
gi|405105766|emb|CCK79263.1| CysS: cysteinyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 487
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 309/494 (62%), Gaps = 11/494 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN++ +KE F P+ GKV MYVCG T YD SH+GHAR+ V FD + R+L+ L+
Sbjct: 1 MSLKVYNTLHGRKEEFVPLNEGKVKMYVCGPTVYDTSHIGHARSVVVFDTILRWLQELEY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII+++N+ GE +++ +Y E+ +M L L PT +P+ ++H+
Sbjct: 61 EVTYVRNFTDVDDKIIKKSNETGEACSAITEKYIDEFHNEMDALNVLRPTVEPKATEHIR 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I D I +I+ AY VEG DV+F+++ YG+LSG+ ++ RAG R+AVD +K++P
Sbjct: 121 HIIDFIQMLIDKGKAYPVEGGDVYFSIDSFKEYGKLSGRNPDDMRAGARIAVDDKKKSPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF+LWK AK GEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENE+
Sbjct: 181 DFSLWKPAKPGEPCWESPWGKGRPGWHIECSAMSYEYLGEGFDIHGGGKDLIFPHHENEL 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V YW+HNG V NNEKMSKSLGNF I+++ + Y P +R FL+S HYR
Sbjct: 241 AQSEAVFGRQFVKYWIHNGFVDINNEKMSKSLGNFTMIKEVLDTYSPEVIRMFLLSNHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFH 374
SP++YS + S + IY L+ E A +S ++ +RI+ + + +L ++F
Sbjct: 301 SPIDYSEDSMREVSMGLDRIYAFLERLENAGVSLYESQLDGSRIDGSRK---GELWNDFC 357
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M+DD N++ + F+ K N L L+E+L N++ + +
Sbjct: 358 AAMNDDFNSAKAIACVFEAVKKG-----NRLLDDANDSPGADLLETLNLFYNDIHAISNV 412
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LG+ + S + K+K + + + I+ER ARKNKDF+++D+IR L
Sbjct: 413 LGIFLLDSKS-YFKAKKEKGMADMAIDPAQIEAFIQERVDARKNKDFARADEIRDHLQSI 471
Query: 495 GIALMDMGKETIWR 508
+ L D + T WR
Sbjct: 472 NVVLEDGPQGTTWR 485
>gi|345876724|ref|ZP_08828488.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226223|gb|EGV52562.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 482
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/502 (45%), Positives = 306/502 (60%), Gaps = 38/502 (7%)
Query: 10 VAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
AA + LKIYN + +KE F P+ G+V MYVCG+T YDL HLGHAR V FD++YR
Sbjct: 14 TAADVVHTMLKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYR 73
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL+ + EVTY+RN TD+DDKII RAN+ GE ++L+ R+ Q D L LPP +P
Sbjct: 74 YLKAMGYEVTYIRNITDIDDKIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEP 133
Query: 130 RVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 188
R + HM++I MI ++I+N AY VE GDV++ V P+YG+LSG+ +++ +G RV VD
Sbjct: 134 RATGHMKEILVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSGKSIDDLESGARVEVD 193
Query: 189 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 248
KR+P DFALWK+AK GEP+WDSPWG GRPGWHIECSAMS L FDIHGGG DL F
Sbjct: 194 EIKRDPLDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTF 253
Query: 249 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 308
PHHENEIAQS A S V YWMHNG V N+EKMSKSLGNFFT+R+I +RY +R+F
Sbjct: 254 PHHENEIAQSEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYF 313
Query: 309 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 368
++++ YRSPLNY L++A A+ Y L+ + + PA +
Sbjct: 314 ILTSQYRSPLNYDEEHLENARAALTRFYTALRGLD-------------EVEPAGGEA--- 357
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
+ FHA M DD NT L F D ++ IN + + + + E+
Sbjct: 358 FIERFHAVMDDDFNTPEALAVLF-DMVREIN------------RLRETGAAKAAGLGAEL 404
Query: 429 KEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 486
+++ +LG+L P AY LK L++ D+ LI++R AR K+++++D+
Sbjct: 405 RQLGGVLGILQDDPEAY------LKGGVGAEGGLSDADIDALIQQRLDARAEKNWAEADR 458
Query: 487 IRADLTRKGIALMDMGKETIWR 508
IR +L GI L D + T WR
Sbjct: 459 IRDELQAAGILLEDGPQGTSWR 480
>gi|341581496|ref|YP_004761988.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
gi|340809154|gb|AEK72311.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
Length = 476
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 301/493 (61%), Gaps = 22/493 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN++T+QKE F P+ G+V MYVCG T YD +HLGHAR V+FD++ RYLEH
Sbjct: 1 MAIRVYNTLTKQKEEFRPLRDGEVRMYVCGPTVYDYTHLGHARTYVAFDVIRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKIIRRAN+ GE+P L+ R+ + +L DM L+ P PRV++HM+
Sbjct: 61 SVLMVMNFTDIDDKIIRRANETGEDPKELAERFLRLFLEDMEALKVKPADVYPRVTEHMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + + ++ AY V+F V++ +YG+LSG +LE R G RV K+NP D
Sbjct: 121 DIIEFVRKLQEKGYAYEGSDGVYFEVQRFKDYGKLSGIKLEELRKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A V YW+H G + N EKMSKSLGNF TIR++ ERY+P +R F++ HYRS
Sbjct: 241 QTEACTGHEWVHYWLHTGFLMVNGEKMSKSLGNFVTIREMLERYNPEVIRLFILQRHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ ++ A + + +Y TL++ VA+ K A + I R++FH
Sbjct: 301 PLDYTEEGMEHAKNNLERLYNTLENIRVAMERADIAFKWGPEEFEAYEAIRNAREKFHEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F+ A +N L +++K PK+ L + E R++
Sbjct: 361 MDDDFNTAEALKAVFE-ASNAVNRYLTVVEK--PKESIL----------RKALEFFRMV- 406
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKG 495
SEV +D ++ EE ++Q LI+ RA RK K+F+ +D+IRA+L G
Sbjct: 407 -------SEVFGIFEDYFREQRAGEEEALIQLLIDVRAQLRKEKNFALADKIRAELREMG 459
Query: 496 IALMDMGKETIWR 508
I L D + T+W+
Sbjct: 460 IQLEDTPQGTVWK 472
>gi|357633334|ref|ZP_09131212.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|357581888|gb|EHJ47221.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 485
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/490 (45%), Positives = 294/490 (60%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+M + KE F +PGKV MYVCG+TAYDL H+GHAR++V FD+L RYL HL EV
Sbjct: 1 MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++AN G ++ RY + DM L L +PR ++++ ++
Sbjct: 61 TFVRNFTDVDDKIIKKANSEGATSAEIAERYIAAFYEDMDRLGILRADAEPRATEYIAEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM ++I N AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DF
Sbjct: 121 ADMAARLIENGHAYRTPSGDVYFRVRSFDGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP WDSP+GPGRPGWH+ECS MS L DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V N EKMSKSLGNF TIR I ERY P LR FL+S+HYRSP
Sbjct: 241 SEAATGSDFCRFWVHNGFVRINTEKMSKSLGNFVTIRTIYERYLPEVLRFFLVSSHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + IY E AL+ + ++ P +NKL + F M
Sbjct: 301 LDYSDQALDEAEKGIKRIYAAKGQMEQALT--RAKWSETKLPPEIGQELNKLEEGFTGAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ + F + + +L K + + E+L +I ++ ILG+
Sbjct: 359 DDDLNTAQAIGHVF----GLVRLAGRVLDDKTLAKSR-EAAEALGRILADLDTWSGILGV 413
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ E L +LK L R + V L+ ER ARK KDF++SD IR +L G+
Sbjct: 414 FGRDS-REFLAELKASRLARLGIDAARVDGLVAERQEARKTKDFARSDAIRDELAGLGVT 472
Query: 498 LMDMGKETIW 507
+MD W
Sbjct: 473 VMDTPAGPQW 482
>gi|407716366|ref|YP_006837646.1| cysteinyl-tRNA synthetase [Cycloclasticus sp. P1]
gi|407256702|gb|AFT67143.1| Cysteinyl-tRNA synthetase, class Ia [Cycloclasticus sp. P1]
Length = 463
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 304/493 (61%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+V +YVCG+T YD H+GHAR V FD++ RYL++L V
Sbjct: 4 LKIHNTLTKQKETFVPINKGEVNLYVCGMTVYDFCHIGHARVMVVFDVVSRYLKYLGYNV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII R+ + GE+ L+ R+ E D A L L P +P +D ME I
Sbjct: 64 KYVRNITDIDDKIITRSIESGEDFKQLTKRFIDEMHQDEASLNVLSPDIEPLATDSMEAI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q+I ND AYV DV++ VE NYG+LSG++L++ AGERV VDS KRNP DF
Sbjct: 124 ITMIEQLIANDNAYVGPNNDVYYCVESFENYGQLSGRKLDDMNAGERVDVDSSKRNPFDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK EPSW SPWG GRPGWHIECSAM+ L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 184 VLWKSAKPDEPSWSSPWGNGRPGWHIECSAMATCCLGNHFDIHGGGMDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+ WMHNG V ++EKMSKSLGNFFT+R + ++Y +R F++S+HYRSP
Sbjct: 244 SEAATGEKYVNTWMHNGFVRIDDEKMSKSLGNFFTVRDVLKKYRGEEIRFFVLSSHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS QL + A+ +Y L+D ++P + K+ I ++F M
Sbjct: 304 LNYSDDQLTESRSALERLYTALRD----VTPVKNEVKSTYI------------EQFENAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD N++ + F+ A + LN LK QP+Q + + L E LGL
Sbjct: 348 NDDFNSAKAIAVLFECA-----NELNKLKHTQPEQAAKTAADLLTMAEP--------LGL 394
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + LK A + A ++ E++ I +R A+ NK++ +DQIR L +G
Sbjct: 395 LSQDPDLF------LKSMAGQDASISNEEIEAQINQRLEAKANKNWGLADQIRDSLKEQG 448
Query: 496 IALMDMGKETIWR 508
+ L D G ET WR
Sbjct: 449 VILEDKGPETTWR 461
>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 481
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/490 (44%), Positives = 303/490 (61%), Gaps = 19/490 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N++T +KE F P+ KV MYVCGVT YD H+GHAR++V FD++ RYL + + +V
Sbjct: 2 LIIFNTLTGKKEEFIPLQDNKVRMYVCGVTVYDYCHIGHARSSVVFDIIRRYLIYKEYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTD+DDKII+R+N+ + L+ ++ +E+ DM L +PP + P+ ++ ++++
Sbjct: 62 TFVKNFTDIDDKIIKRSNEENIHWKELTEKFIKEHDYDMEKLNIMPPDFTPKATEFIDEM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ ++I AYVV+GDV++ VEK +YG+LS + L+ AG RV VD RK NP DFA
Sbjct: 122 IKLCEKLIEKGYAYVVDGDVYYRVEKFKDYGKLSKRNLDELLAGARVEVDERKENPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K EP W+SPWG GRPGWHIECS MSA L FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKSKENEPYWESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA + YW+HNG V N EKMSKSLGNFFTIR+I + + P LR FL++ HYRSP+
Sbjct: 242 EAAEEKMFAKYWIHNGFVNINKEKMSKSLGNFFTIREIIKEFDPEVLRFFLLTTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A ++ IY L D E + + N E+ + EF M
Sbjct: 302 DFSFDHLVEAEQSLNRIYTFLDDLEHYVVSKKGKNYLEEANKIFEN----FKKEFETSMD 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD N++ L F D +K IN LN K+ ++ L L + +KI V +VL I+
Sbjct: 358 DDFNSAKALAAIF-DYIKEINRLLNQKVVKETYEEILKLTNNFKKI---VNQVLGIINKT 413
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P ++ L ++E ++++ IEER ARKNK+F +D+IR +L GI L
Sbjct: 414 PKEWFASNLP-----------ISESELIKKIEERTNARKNKNFELADKIRDELESLGIEL 462
Query: 499 MDMGKETIWR 508
+D T +R
Sbjct: 463 LDTPTGTRYR 472
>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 494
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/509 (43%), Positives = 310/509 (60%), Gaps = 25/509 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + I+N+ T +KE P+ G V MYVCG+TAYD H+GHAR+ + FD++YRYL+H
Sbjct: 1 MPILIHNTKTARKEKLAPLEEGHVKMYVCGITAYDYCHIGHARSVLVFDMIYRYLQHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VT+VRNFTD+DDKII+RA + G LS R+ ++ DM L LPPT +P ++H+
Sbjct: 61 RVTFVRNFTDIDDKIIKRAQEQGTTCTELSQRFIAKFHEDMTALNTLPPTLEPLATEHLP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ MI +++ D AY +GDV++ V++ YG LSG+ LE+ +AG RVAV+ K +P D
Sbjct: 121 EMIAMIEELVAKDLAYEAQGDVYYRVQRFAGYGVLSGRGLEDMQAGARVAVNDNKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA+K GEP+WDSPWGPGRPGWHIECSAM YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FVLWKASKPGEPAWDSPWGPGRPGWHIECSAMGKKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A S + W+H+G VT +EKMSKSLGNF TIR++ ER+ ALR F+ S HYR+
Sbjct: 241 QSEGASGKSFANLWVHHGFVTIKDEKMSKSLGNFLTIREVLERHPAEALRLFVFSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-------EDCINKL 369
PL+YS L A A+ IY L + Q G +P+A D + KL
Sbjct: 301 PLDYSETALQDAEAALTRIYSALA------ATAQLPGAAGDPSPSASVVGEKDRDKLAKL 354
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
FH M D N++ L F DA+K IN L P Q L L L++ ++
Sbjct: 355 EQSFHQAMDIDFNSALALGRIF-DAIKIINKVRQALPAN-PAPQDLQL---LQQTAATIR 409
Query: 430 EVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
++ + GL P ++ E QQ + L + + ++ L+E+R AR++KD++++D+I
Sbjct: 410 DLTAVFGLAQEEPVSWLEKRQQ---RLLAQLSIKPAEIEALLEQREQARRDKDWAEADRI 466
Query: 488 RADLTRKGIALMDMGKETIWRPCVLVEQE 516
R L ++ I + D T W VL EQ+
Sbjct: 467 RDQLLQQRIVIKDGPDGTKWE--VLQEQQ 493
>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|187629838|sp|A5D5M0.1|SYC_PELTS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 484
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/490 (46%), Positives = 300/490 (61%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE F P PG+V MYVCG T Y+ HLG+AR V FD + RYL H EV
Sbjct: 1 MEIYNTLTRRKENFQPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII RA + G++PL+L+ RY EY D L P VS+H+ I
Sbjct: 61 LFVQNFTDVDDKIINRAQEEGDDPLALARRYIGEYFKDADALNVRRADRHPLVSEHIPDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ +++ AYVV+G+V+F V K YG+LSG+ LE+ +AG RV VD RKR+P DFA
Sbjct: 121 IKMVDELVKKGAAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEVDPRKRDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWGPGRPGWHIECSAMS YL + FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPCWDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA V YWMHNG +T N EKMSKSLGNFF +R I ++ P +R FL+S HYRSPL
Sbjct: 241 EAATGQPFVRYWMHNGFITVNEEKMSKSLGNFFLVRDILAKFPPELVRFFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ ++ +A + I +L+ AL G A + D +++R F A M
Sbjct: 301 DFDGEKMAAAGRGLERIKTSLRLLYEALERPVSEGVQA---VCSRDPFDEIRASFEAAMD 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ + GA D + N+++ Q + L +L + NE EVL I +
Sbjct: 358 DDFNTA-LAIGAVFDLAREANTAVQRTGPAVSGQDRQILQYAL-DLFNEFNEVLGIFKV- 414
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
GA +L + A + L E + ++E R ARK KD+S +D+IR L GI L
Sbjct: 415 -DGASGRLL--IDGAAGDDSGLVEGLINLILEVRQEARKRKDWSTADRIRDGLKELGILL 471
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 472 EDTPQGVRWK 481
>gi|344340320|ref|ZP_08771246.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343799978|gb|EGV17926.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 466
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/497 (46%), Positives = 302/497 (60%), Gaps = 42/497 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T++KE F PI P KV MYVCG+T YD HLGHAR V FD++YRYL L EV
Sbjct: 2 LQIHNSLTRRKEPFEPIEPRKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRA + GE+ +L++R+ Q D L LPPT +PR + HM++I
Sbjct: 62 TYIRNITDIDDKIIRRAAEAGESMQALTDRFIQAMHEDSDALGILPPTDEPRATAHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV E GDV++AV + YG+LSG+ ++ RAG RV VD KR+P DF
Sbjct: 122 LAMIGTLIEKGLAYVAENGDVYYAVARFAGYGKLSGKDPQDLRAGARVEVDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP+WDSPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSTCALGHHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A ++ V+ WMHNG V N EKMSKSLGNFFT+R+I +R+ P +R+F++++ YRSP
Sbjct: 242 SEGATGETFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRFRPEEVRYFILTSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC--INKLRDEFHA 375
LNY L+ A A+ +Y L+ + P A D + FHA
Sbjct: 302 LNYDDEHLEQARAALTRLYTALR-------------GVPDVAPDAVDASVAAPFVERFHA 348
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F D ++ +N + LR++ IL
Sbjct: 349 AMDDDFNTPEALAVLF-DLVREVNRI-----RADDPGAAAGPAAVLRRLGG-------IL 395
Query: 436 GLLPPGAYSEVLQQLKDKALK-RAE---LTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
G +LQ+ D L+ RA+ L++ ++ L++ R AAR KD++++D++R L
Sbjct: 396 G---------ILQEDPDLYLRGRADDGGLSDTEIESLVQARIAARAAKDWAEADRLRKLL 446
Query: 492 TRKGIALMDMGKETIWR 508
T GI L D T WR
Sbjct: 447 TEAGIGLEDGPSGTAWR 463
>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 487
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 302/491 (61%), Gaps = 8/491 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++++IYN+++++KE+ P+ G V +YVCG+T+YD H+GHAR+A+ FD++ RYL H
Sbjct: 1 MSIRIYNTLSRRKEILQPLEEGHVKLYVCGITSYDYCHIGHARSALVFDMVVRYLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTD+DDKII RAN+ G + SL+ R+ E+ DM L L P +P+ ++H+
Sbjct: 61 KVTFVRNFTDIDDKIINRANEQGIDSASLALRFINEFYTDMDALGTLRPDLEPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I +I+ AY +GDV+F VE+ YG+LSG+ L + +AG RV V+ +K +P D
Sbjct: 121 EMIGLIEDLIDKGMAYPADGDVYFRVERFVGYGQLSGRGLADMQAGARVEVNDKKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEP W SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FVLWKAAKPGEPKWPSPWGEGRPGWHIECSAMSRKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QSC A + WMH+G VT EKMSKSLGNF TIR + ++Y P LR F+ S YR+
Sbjct: 241 QSCGASGKPFANLWMHHGFVTIKEEKMSKSLGNFLTIRDVLKQYEPEVLRLFIFSTQYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+++ L A + +Y+ L +V P + + I + L D FH
Sbjct: 301 PLDFTETALHDARAGLERMYECL--AQVEDLPAEGTEGASVITDKDRTALASLVDRFHQA 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M +D NT+ L F D +K +N L L ++ P L+L LR E +E+ +LG
Sbjct: 359 MDNDFNTAQALAHLF-DTVKLLNKVLRTLPER-PAAADLNL---LRTTAAEFRELAGVLG 413
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L+ +EV+ + K L +L EE + LI +R AR KD+S SD++R L I
Sbjct: 414 LVQRNP-AEVVAGNRAKILAGIDLDEETINGLITKRNQARAAKDWSTSDEVRDYLLEHRI 472
Query: 497 ALMDMGKETIW 507
L D + T W
Sbjct: 473 VLKDSPEGTTW 483
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40.1|SYC_HAHCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/491 (46%), Positives = 307/491 (62%), Gaps = 28/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIY+S++QQKE F PI GKVG+YVCG+T YD HLGHAR V FD++ RYL +V
Sbjct: 2 LKIYSSLSQQKEEFKPIQAGKVGIYVCGMTVYDYCHLGHARVLVCFDIITRYLRAKGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKI+ RA D GE+ +L+ R+ D L L PT +PR + H+++I
Sbjct: 62 NYVRNITDVDDKILNRARDNGESVDALTARFIDAMHEDERALGVLSPTSEPRATGHIDEI 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++++ AY GDV+++VE+ +YG+LS Q+L+ RAG R+ VD+ KR+PADF
Sbjct: 122 IAMIQRLMDKGYAYHASNGDVYYSVEQFADYGKLSKQKLDEIRAGARIEVDAEKRSPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE SWDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGELSWDSPWGEGRPGWHIECSAMSTRCLGDTFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V N EKMSKSLGNFFTIR+I ++Y +R+FL S+HYRS
Sbjct: 242 SEAATGCKYVNYWMHAGAVRVNKEKMSKSLGNFFTIREILDKYPAEVVRYFLASSHYRSA 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS + L+ A + +Y ++++ + E G + P + + R+ FH M
Sbjct: 302 IDYSDVALEEARSGLERLYNSIREL------YGELGAVSMDEP----LVGEYRERFHQAM 351
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NTS + F D K +N + KK+ + + LSL + + ++ +LGL
Sbjct: 352 DDDFNTSSAVAVLF-DMAKAVN-----VAKKEDRTRALSLAKGM-------VDLAEVLGL 398
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L A E L Q + + + L+ ++ I +R AAR NKDF++SD+IR L KG+
Sbjct: 399 LQ--ADPESLMQGEGEEV--GGLSVAEIEDFIAQRNAARANKDFAESDRIRDLLKEKGVL 454
Query: 498 LMDMGKETIWR 508
L D + T W+
Sbjct: 455 LNDSREGTSWQ 465
>gi|444913172|ref|ZP_21233326.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
gi|444716175|gb|ELW57030.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
Length = 488
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/494 (44%), Positives = 305/494 (61%), Gaps = 18/494 (3%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+++++N+MT QKE P+VPGK+G+YVCG T Y H+G+AR SFD++ RYL H E
Sbjct: 5 SIRLFNTMTMQKETLVPVVPGKLGVYVCGPTVYSYVHIGNARTFTSFDVVVRYLRHRGFE 64
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN+TDVDDKII+ A + GE P++L+ R+ + + D L L P P+VSDH+ +
Sbjct: 65 VTYVRNYTDVDDKIIKAAQETGEAPVALAARFVEAFREDARALHLLEPDVSPKVSDHIPE 124
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I ++++ AY +GDV+F+V + P+Y +LS + L+ GERV +K P DF
Sbjct: 125 ILRIIGKLVDKGVAYASQGDVYFSVRRYPDYAKLSKRDLDELCVGERVQPGEQKHEPLDF 184
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWGPGRPGWHIECSAMS YL FDIHGGG+DLIFPHHENE+AQ
Sbjct: 185 ALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSERYLGETFDIHGGGLDLIFPHHENELAQ 244
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + YWMH G + KMSKSLGN +R+ ER ALR F +S HYR P
Sbjct: 245 SEAASGHTLARYWMHCGFLDLEGAKMSKSLGNVVRLREALERVDAEALRFFFLSTHYRHP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L +S L A + Y Y+TL+ + + GK P D + D F A+M
Sbjct: 305 LAFSDKGLADAELRMEYFYETLRKVDERVG-----GKEFAPGPLHGDAARFMAD-FEAQM 358
Query: 378 SDDLNTS---HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
DD N++ +L+G F + +N L K P + + + +LR + +V++V I
Sbjct: 359 DDDFNSAGALGVLSGLF--------AMMNELVDKPPVKDKAVVGRTLRALREDVRKVSGI 410
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LGL S +L++ +D+A+K L V QL+ RA ARK KDF+++D++R +L
Sbjct: 411 LGLFEEAPASWLLRR-RDRAVKERGLDVARVEQLMAARAEARKAKDFAEADRLRVELKSL 469
Query: 495 GIALMDMGKETIWR 508
G+ +MD T+W+
Sbjct: 470 GVEIMDTAAGTLWK 483
>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 474
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/500 (44%), Positives = 312/500 (62%), Gaps = 36/500 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+QKE F P+ PG V MYVCG T YD SH+GHAR+AV FD+++RYL+
Sbjct: 1 MALTLYNTLTRQKETFKPLKPGHVSMYVCGPTVYDSSHIGHARSAVVFDIVFRYLQESGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII RAN+ + +LS Y E+ DM L L PT +PR ++ ++
Sbjct: 61 EVTYVRNFTDVDDKIINRANERDMDCQALSEIYIDEFHRDMDALAVLRPTLEPRATEFIK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++ ++++ AYVV+GDV+F V +YG+LSG++LE+ AG RV VDSRK++P D
Sbjct: 121 EIIEVTSKLVEKGHAYVVDGDVYFDVRSFESYGKLSGRKLEDMEAGARVKVDSRKKDPFD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W+SPWG GRPGWHIECSAMS L FDIHGGG DLIFPHHENE+A
Sbjct: 181 FALWKAKKPGEPAWESPWGEGRPGWHIECSAMSWSRLGETFDIHGGGQDLIFPHHENEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YWMHNG V ++EKMSKSL NF T+++I +++HP A+R FL+S HYRS
Sbjct: 241 QSEAAFGQQFVRYWMHNGFVNIDSEKMSKSLNNFLTVKEILDQFHPEAVRLFLLSKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLRDE 372
P++++ + A+ + +Y LQ ++ FQ G +R
Sbjct: 301 PVDFTEQAMKEAASGLDRVYSCLQRILESVGGLDDDFQISGHWSR--------------- 345
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE--NEVKE 430
F A M DD NT+ L G +A++ +N L+ L+ + +R E + +
Sbjct: 346 FCACMDDDFNTAGAL-GILFEAVRDVNRLLD---------GDLTGDDQVRATEAGAAIVK 395
Query: 431 VLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
+ +LG+ P AY + K++A + V LI +R+ ARK+KD++ +D IR
Sbjct: 396 MGGVLGMFQEDPVAY---FEGKKEQAAQDGGFDPAMVDDLIAKRSQARKDKDWNTADAIR 452
Query: 489 ADLTRKGIALMDMGKETIWR 508
LT G+A+ D TIW+
Sbjct: 453 DQLTEMGVAIEDTPDGTIWK 472
>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
Length = 474
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/492 (44%), Positives = 306/492 (62%), Gaps = 24/492 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++ E F PI GKVGMYVCGVT YD H+GHAR+AV+FD++YRYL+ +V
Sbjct: 2 LKIYNTLGKRLEEFKPIKNGKVGMYVCGVTVYDNCHIGHARSAVAFDVMYRYLKFKGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII RAN+ G + ++ RY EY DM L P +P+ ++H+ +I
Sbjct: 62 TFVKNFTDVDDKIINRANEEGVSCNEIAQRYIGEYYKDMYRLNIAKPEVEPKATEHINEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+++ ++ + AY V GDV++ VEK +YG+LSG+ ++ ++G RV ++ +K NP DFA
Sbjct: 122 IELVRKLQDMGYAYEVNGDVYYRVEKFKDYGKLSGKNIDELKSGARVEINDKKENPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K EP W SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKRSKENEPKWKSPWGEGRPGWHIECSAMSMKYLGESFDIHGGGEDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YW+HNG V N EKMSKSLGNFFTI+ I ++Y LR+FL+ HYRSP+
Sbjct: 242 EAATGKPFARYWIHNGFVRINKEKMSKSLGNFFTIKDILKKYDGQTLRYFLLLTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S LD+A +A+ Y +Q E + F+++GK ++ E + L F M
Sbjct: 302 DFSFEGLDAAKEALNRYYNFIQRLED--TEFEKNGK---VDELLEKRLKDLLARFEEAMD 356
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQLSLIESLRKIENEVKEVLRILG 436
+D N + F +K N L+ + + K K + + +ES+ KI++ +LG
Sbjct: 357 EDFNAPKAIGEVFS-VIKTFNQYLDSITEGDKPKKAYKETFLESMNKIKS-------VLG 408
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+ + S + + D + EE + Q RA ARKNKD+ +D+IR +L KGI
Sbjct: 409 VFDTSSASWFIPEGID-----VDWVEERIKQ----RALARKNKDYETADKIRDELNGKGI 459
Query: 497 ALMDMGKETIWR 508
L D + T W+
Sbjct: 460 ILEDAKEYTRWK 471
>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 490
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 300/496 (60%), Gaps = 15/496 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+++++KE F P+ PG V +Y CGVT YD H+GHAR+AV FD++ RYL L +V
Sbjct: 1 MQVYNTLSRRKEAFIPLKPGIVQIYACGVTVYDDCHIGHARSAVVFDVIVRYLRFLGNKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++VRNFTD+DDKII+RA + +++ Y + DMA L P +P+ +DH+++I
Sbjct: 61 SWVRNFTDIDDKIIQRAEREHTSWKTVAETYIASFQRDMAALGVAPADIEPKATDHIDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I + + AY GDV+F V K P YG+LSG+ L++ AG RV V+ +K NP DFA
Sbjct: 121 IGFIQVLEDQGLAYQRNGDVYFPVAKFPGYGKLSGRSLDDMLAGARVDVNIQKDNPFDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA+K GEP+WDSPWGPGRPGWHIECSAMS HYL FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKASKPGEPAWDSPWGPGRPGWHIECSAMSRHYLGETFDIHGGGADLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YW+HNG VT N EKMSKSLGNFFTIR++ ++HP +R FLI HYRSPL
Sbjct: 241 EAAHGKPLARYWLHNGMVTVNQEKMSKSLGNFFTIREVLAKFHPEVVRFFLIQNHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE------HGKTARINPAAEDCINKLRDE 372
++S L A +A+ +Y TL + P + ++ + + +R
Sbjct: 301 DFSDQALAEAENALERLYSTLARLDQTTGPIAAPEAISGAFSLSGLDSEEQSRLLTIRSR 360
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT+ L G DA++ +N +++ +S + R+ + +L
Sbjct: 361 FLEAMDDDFNTAQAL-GVLFDAVRLLN---RIVEHNPSGNADMSALAWTRRELTVLGGIL 416
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+L P +LQ L+ K + ++ +LI RA ARK +DF+K+D IR L
Sbjct: 417 NLLQQDP----QTMLQNLRQKT-DALTIPPSEIERLIAARAEARKQRDFTKADAIRQQLA 471
Query: 493 RKGIALMDMGKETIWR 508
G+ L D + +WR
Sbjct: 472 EAGVLLEDTPQGAVWR 487
>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226735066|sp|B5YID4.1|SYC_THEYD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 487
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/494 (43%), Positives = 300/494 (60%), Gaps = 15/494 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N++T + E F PI KVG+Y CGVT YDL H+GHAR+AV FD++ +YL + EV
Sbjct: 1 MRVFNTLTDKLEEFKPINDKKVGIYACGVTVYDLCHIGHARSAVVFDVIVKYLRYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDKII RAN G + ++ +Y EY DM L +P+ ++H+ ++
Sbjct: 61 KFVKNFTDIDDKIINRANKEGVSWKEIAEKYTGEYYKDMDRLGITRADIEPKATEHINEM 120
Query: 139 KDMITQIINNDCAYVVE----GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNP 194
++I +IN AY +E V+F+VEK P YG+LS ++++ +G RV VD RK++P
Sbjct: 121 IEIIQTLINKGYAYEIEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGARVEVDERKKSP 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DFALWKA+K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENE
Sbjct: 181 LDFALWKASKPGEPWWDSPWGKGRPGWHIECSAMSIKYLGETFDIHGGGADLIFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A YW+HNG VT N EKMSKSLGN IR + + Y ALR FL+S+HY
Sbjct: 241 IAQSEAFTGKPFAKYWIHNGFVTINKEKMSKSLGNVLNIRDLLDIYDAEALRLFLLSSHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSP+ ++ + A V +Y T+ E + + K++ + + L+ EF
Sbjct: 301 RSPIEFAHEYIKEAEATVDRVYSTIMRIE-DFEKIEINDKSSIEFDKVKAMLENLKPEFE 359
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ FI + KK + +++ + + ++ E+ VL +
Sbjct: 360 KAMDDDFNTAKALGILFE----FIKEINRFMDKKPSQNKEIDFLVTAKRAIKEIGSVLNL 415
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P Y ++L+ +K+ + EE++ +LI+ER ARKNKD+ K+D IR L K
Sbjct: 416 FQRQPVDWYRDLLK------VKKIAIKEEEINRLIKERTEARKNKDWKKADSIREQLLSK 469
Query: 495 GIALMDMGKETIWR 508
GI L D TIW+
Sbjct: 470 GIILEDKPDRTIWK 483
>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 472
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/492 (42%), Positives = 304/492 (61%), Gaps = 24/492 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L +YN +T++KE F P+ G+VG Y CG T YD H+G+AR + FD+ RYLE +
Sbjct: 1 MSLMLYNDLTRKKEPFIPLKEGEVGFYSCGPTVYDFFHIGNARPFIVFDVFRRYLEDIGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +V+NFTD+DDK+I RAN+ G L++ + +EY D L PR +DHM+
Sbjct: 61 KVVFVQNFTDIDDKMINRANEEGITVKELADAFIKEYFEDADALGVRRADIYPRATDHMK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +++ +I+ AYVV+GDVFF+VE P YG+LS Q +E+ ++G R+ V+ +KR+P D
Sbjct: 121 EIVEVVQTLIDKGHAYVVDGDVFFSVESFPGYGKLSKQSIEDLQSGSRIDVNEQKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W+SPWG GRPGWHIECS MS YL + FDIH GG DLIFPHHENE+A
Sbjct: 181 FALWKAQKPGEPAWESPWGLGRPGWHIECSVMSTKYLGNTFDIHSGGSDLIFPHHENEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA V +W+HNG++ + EKMSKSLGNF T+R ++Y PLA+R+F++SAHYRS
Sbjct: 241 QAEAATGMQFVRFWLHNGYLLIDKEKMSKSLGNFLTVRNARKKYSPLAIRYFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A+ AV + D E AL ++ K +E I + +F+
Sbjct: 301 PINFSEEGLNQATGAVERLRNCWTDLEYALQSREQKEKDDTEAFLSE--IKQAETKFYEE 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT+ L F+ ++ IN+ L K + ++ + ++ ++ I+G
Sbjct: 359 MNDDFNTAGALGSVFE-VVRLINTYL-----KDNSSIDFKVCKAAQTFFTKIDGIMGIMG 412
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L ++ EL ++ +IEER AARK +DF+KSD IR L KGI
Sbjct: 413 LES----------------EKEELDTSEIESMIEERTAARKARDFAKSDAIRDQLAEKGI 456
Query: 497 ALMDMGKETIWR 508
L D + T W+
Sbjct: 457 ILEDTPEGTKWK 468
>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/500 (45%), Positives = 308/500 (61%), Gaps = 29/500 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++++YN MT+QKE F P+ PGKVG+YVCGVT Y+ H+G+AR V +D + R+L+H
Sbjct: 1 MSIRVYNDMTRQKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDTIRRFLDHEGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKIIR AN+ G ++NRY + Y M L PRVS+H+
Sbjct: 61 DVTYVQNFTDVDDKIIRAANEEGVTWDVIANRYIKAYFEVMDKLHVKRAHIYPRVSEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + ++INN YVV+GDV++ VE+ +YG LSG++L++ AG RV VD RK NP D
Sbjct: 121 DIIHTVQELINNGYGYVVDGDVYYRVERFSHYGELSGRKLDDMMAGARVDVDERKENPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEPSWDSPWG GRPGWHIECS MS YL + D HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGNTLDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQ-DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS A V YW+HNG +T N EKMSKSLGNF T+ + + Y P +R+F+++ HYR
Sbjct: 241 QSEGATGVHPFVRYWVHNGFITINEEKMSKSLGNFKTVYDLLKEYEPETIRYFILNTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-----DCINKLR 370
SPL++S +L A ++L+ A + QE + + P AE D + +LR
Sbjct: 301 SPLDFSQERLAEAG-------RSLERLRTAQNNLQEIQQVITVGPDAESLALRDKVEELR 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
F MSDD NTS ++ F A K IN N + K+ L+E +I+ KE
Sbjct: 354 KGFFDAMSDDFNTSLAISYLFALA-KEINVYHNAIISG-AKKPDGKLVE---QIDKAWKE 408
Query: 431 VLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
++ ++G+L P A E ++A ++ IEER AARK +DF+K+D IR
Sbjct: 409 MIGVIGILENQPAANGEGGAVSNEEA---------EIAARIEERQAARKARDFAKADAIR 459
Query: 489 ADLTRKGIALMDMGKETIWR 508
+L KGI L D + W+
Sbjct: 460 DELAAKGIILEDTPQGVRWK 479
>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 479
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/495 (45%), Positives = 300/495 (60%), Gaps = 21/495 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL IYN +T +KELF P+ PGKVGMYVCG T Y H+GHAR+ V FD++ RYL
Sbjct: 1 MTLSIYNVLTGKKELFVPVNPGKVGMYVCGPTVYGPCHIGHARSVVVFDVIARYLRVAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTDVDDKII RA + G+ ++ +Y E+ DM L T +P+ ++H++
Sbjct: 61 DVTYVRNFTDVDDKIIHRAAEEGKTSEQIAEKYIAEFYRDMDALFVQRATVEPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I ++N AY GDVFF+VE P YG+LSG++L+ AG R+ VD RKRNP D
Sbjct: 121 DILAVIQILVNKGVAYEAGGDVFFSVEAFPGYGKLSGRKLDQMEAGARIEVDKRKRNPFD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEPSW+SPWG GRPGWHIEC+AMS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKAEKPGEPSWESPWGRGRPGWHIECTAMSSRYLGQTFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA +W+HNG V N EKMSKSL NF I +I E YHP +R FL+S+HYRS
Sbjct: 241 QSEAAFGREFARFWVHNGFVQINQEKMSKSLNNFKMINEILEAYHPETVRLFLLSSHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+++S + A + +Y L E AL+P E + +PA++ + + F
Sbjct: 301 PIDFSDTSMAEAGAGLDKLYTALGRVE-ALTPSGE-----KPSPASDGDAGEYWNSFCQA 354
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ + F+ A + IN L+ Q L + + +++ +LG
Sbjct: 355 MDDDFNTARAVAALFETA-RHINRLLD--------QAGDLLTADVSAHYDVMRKSGDVLG 405
Query: 437 LL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
L P Y E +Q A K+ + ++ +++ +R AARK KDF+K+DQ+R LT
Sbjct: 406 LFNTPAQVYFEGRKQ---AAAKKDAVDPAEIDRMVAQRVAARKAKDFAKADQLRKQLTDL 462
Query: 495 GIALMDM-GKETIWR 508
+ L D T W+
Sbjct: 463 NVVLEDSPDGTTTWK 477
>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
Length = 484
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/496 (44%), Positives = 302/496 (60%), Gaps = 19/496 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YNS ++KE+F P+ GKVG+YVCGVT YDL H+GHAR+ + FD+L RY
Sbjct: 1 MPLKLYNSSIRKKEVFKPLNDGKVGLYVCGVTVYDLCHIGHARSTIVFDVLARYFRARGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTD+DDKII RA L + P L+ + + DM L L +PR +D++E
Sbjct: 61 DVTYVRNFTDIDDKIIERAKLLKKAPKELAREFIDAFYEDMGKLGVLKADVEPRATDYVE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +M +++ AY GDV+F+V+ P YG LSG+ LE+ RAG RVAVD RKR+P D
Sbjct: 121 DMIEMTQTLMDRGYAYTEGGDVYFSVDSYPGYGSLSGRNLEDMRAGSRVAVDDRKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK+AK GEP W SPWGPGRPGWH+ECS MS +L FDIHGGG DL+FPHHENE A
Sbjct: 181 FVLWKSAKPGEPQWPSPWGPGRPGWHLECSVMSNRHLGPTFDIHGGGRDLLFPHHENERA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YW+HNG VT +EKMSKSLGNF TIR ++YHP LR FL+S HYRS
Sbjct: 241 QSMCANDGEFARYWVHNGFVTVESEKMSKSLGNFLTIRDALKKYHPEVLRLFLLSKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S + + + IY+ LQ L P + KT +ED ++ EF+ +
Sbjct: 301 PLDFSAKDVANLQSGLVRIYRMLQRLNDLLGP-GDGEKT------SEDSLSGASGEFYEK 353
Query: 377 ----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
M DDLNT+ L F D ++ +N ++ ++ LS ++S R +++
Sbjct: 354 FCEMMDDDLNTAGALGLVF-DKVREMNRLMDPDGNGAVSEKALSSLKSQR---DQLLRAG 409
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
ILGL +E +QL A ++ +++ L+++R+ AR KD++ SD IR L
Sbjct: 410 EILGLFQQNP-AEFFEQL---ASPSKDVNTDEIEALVKKRSQARVAKDWALSDTIRDQLK 465
Query: 493 RKGIALMDMGKETIWR 508
G+ L D + T WR
Sbjct: 466 EMGVVLEDGPQGTTWR 481
>gi|357039770|ref|ZP_09101562.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357576|gb|EHG05349.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
Length = 485
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/490 (43%), Positives = 302/490 (61%), Gaps = 8/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE P PGKV +YVCG T Y+ HLG+AR V FD + RYL++ V
Sbjct: 1 MRIYNTLTKKKEELIPREPGKVAIYVCGPTTYNYIHLGNARPIVVFDTVRRYLKYKGFNV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII RA + G++ +L+ RY EY D L L P+VS H+ +I
Sbjct: 61 LYVQNFTDIDDKIINRAREEGDDHQALAERYINEYFKDADALNVLRADIYPKVSGHITEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ ++ AY+V+GDV++ V K YG+LSG+ LE+ +AG RV +D+RK +P DFA
Sbjct: 121 IKLVETLVEKGFAYLVDGDVYYNVRKFAGYGKLSGRTLEDMQAGARVEIDTRKNDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP+WDSPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKSAKPGEPAWDSPWGKGRPGWHIECSAMALKYLGVNFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMHNG +T N EKMSKSLGNFF +R I + P +R +L+ HYRSPL
Sbjct: 241 EAATGQPFARYWMHNGFITVNQEKMSKSLGNFFLVRDILSEFSPEVVRFYLLGTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L +A + I +L+ + AL+ ++ G R +PA + ++R EF M
Sbjct: 301 DFDDEKLTAAQKGLERIKTSLRLLDEALAG-RQAGSAERPDPALAVRLEEIRIEFEKAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ + TG + + +NS L P ++ I +L+K + +LG+
Sbjct: 360 DDFNTA-LATGMLFNLAREVNSYLQRSDFPSPAEK----IAALQKARQVFLQFNSVLGVF 414
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
A E L L+D+ ++ ++ E+ + +IE R AR+NKD+ +D++R L GI L
Sbjct: 415 KTSARGEFL--LEDEGSEKEKVVEDLIDLIIEIRQTARQNKDWPTADRMRDRLKELGIVL 472
Query: 499 MDMGKETIWR 508
D W+
Sbjct: 473 EDTPGGVRWK 482
>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|122985612|sp|Q1H417.1|SYC_METFK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 455
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/494 (46%), Positives = 301/494 (60%), Gaps = 46/494 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F+PI+PGKV MYVCG+T YD HLGHAR V FD++ R+L EV
Sbjct: 2 LKIYNTLARAKQTFSPIIPGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRSSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE +L++R+ D A L P +PR +D++ ++
Sbjct: 62 TYVRNITDIDDKIIARANENGETINALTDRFIAAMNEDAARLGVWRPDLEPRATDYIHEM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY + GDV++AV +YG+LSG+ LE+ RAGERV VD+ KR+P DF
Sbjct: 122 IAMIVALIEKHHAYAADNGDVYYAVSSFASYGKLSGKSLEDLRAGERVEVDAHKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSWDSPWGPGRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGPGRPGWHIECSAMGARHLGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG + ++EKMSKSLGNFFTIR++ E+Y +R F++ AHYRSP
Sbjct: 242 SEGAHGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y TL+ E+ P AE F +
Sbjct: 302 LNYSSHHLDDAKQALTRLYNTLRGRELPQLDIDWR------QPEAE--------RFKQAL 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT F+ + S N + Q +L+++L LGL
Sbjct: 348 DDDFNTPEAFAVLFE-----LASEAN----RTGSAVQAALLKALAG----------QLGL 388
Query: 438 LPPGAYSEVLQQLKDKALKR---AELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LQ+ D+ LK A L+ +++ +LI ER AARK K+F+++D+IR LT +
Sbjct: 389 ---------LQRDPDEFLKGEAVAGLSPDEIERLIAERLAARKCKNFAEADRIRDALTAQ 439
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 440 GIILEDTPQGTSWR 453
>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 461
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/490 (45%), Positives = 302/490 (61%), Gaps = 34/490 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T QKE F PIV GK+GMYVCG T YD H+GHARA +SFD++ R L HL ++
Sbjct: 2 LRIYNTLTGQKEEFKPIVEGKIGMYVCGNTVYDFCHIGHARAMISFDVISRILRHLDYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE P L+ R + D L LPP +P+ ++ M++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGELPSDLTERMIEAQQEDEKALGNLPPDREPKATEFMQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI +++ AY + GDVF+ + +YG+L+ ++LE AG RV V K +PADF
Sbjct: 122 INMIKTLVDKGFAYQSDSGDVFYRASRFTDYGKLNNRKLEEMLAGARVEVTESKEHPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GE WDSPWG GRPGWHIECSAMS + L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKPVKEGEVHWDSPWGKGRPGWHIECSAMSTNCLGDHFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V NNEKMSKSLGNFFTIR++ + Y+P LR+ ++S+HYRSP
Sbjct: 242 SEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTIREVLKLYNPEVLRYLMVSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L+ A A+ +Y L+D ++ P + D R F A +
Sbjct: 302 IDYSDQSLNDAKVALERLYNALRD------------QSCSEIPESSD----YRTRFTAAL 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L+ F D ++ +N + K + L E+L E+ + +LGL
Sbjct: 346 NDDFNTPVALSVLF-DLVRDLN---------KAKTESAELAETLAA---ELTNLASVLGL 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L Y + LK+ ++ +D+ +LIEER ARK+K+FS+SD+IR L KGI
Sbjct: 393 L----YQDADYFLKNGTFDAEGISADDIEKLIEERKQARKDKNFSRSDEIRDLLAEKGIE 448
Query: 498 LMDMGKETIW 507
L+D + T W
Sbjct: 449 LLDSREGTSW 458
>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 467
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/492 (45%), Positives = 298/492 (60%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +YN +T++KE+F P PG+V YVCG T YD H+G+AR + FD+L RYLEH
Sbjct: 1 MAFAVYNDLTRRKEVFVPQNPGEVRFYVCGPTVYDFFHIGNARPFIVFDVLRRYLEHQGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYV+NFTDVDDK+IRRA +LG + L+ R+ Y D L T PR ++ +
Sbjct: 61 TVTYVQNFTDVDDKMIRRAAELGISVPELAERFIAAYFEDADALGVRRATVHPRATEEIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++I I++ AY VEGDV+F V+ P YG LS Q LE ++G RV VD RKR+P D
Sbjct: 121 AILELIQAILDRGHAYAVEGDVYFDVKSYPAYGVLSKQSLEELQSGARVEVDPRKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W SPWG GRPGWH+ECSAMS +L D HGGG DLIFPHHENEIA
Sbjct: 181 FALWKAQKPGEPAWKSPWGMGRPGWHVECSAMSRRHLGETLDFHGGGCDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG++ + EKMSKSLGNF T R+ +R+ PLA+R F++SAHYRS
Sbjct: 241 QSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFLTAREARKRFPPLAIRLFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L A+ A + + E AL +A + A + + R+ F A
Sbjct: 301 PINFSEEGLMQATAAQERLRNGWTELEFALG---HRSASAEPDGALRRMLREGRERFLAA 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
+ DDLNT+ + F D +K +NSSL ++P L + + EV+++L ILG
Sbjct: 358 LDDDLNTAGAIGVVF-DVVKGVNSSLG----ERP-DADLEALGQAKTFFLEVEDILGILG 411
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+ P E EEDV +LI+ER AARK +DF+++D IR +L +GI
Sbjct: 412 VAP------------------EESLEEDVDRLIQERQAARKGRDFARADAIRDELLARGI 453
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 454 LLEDTPQGPRWK 465
>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153567|ref|YP_005702503.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
gi|61216247|sp|Q72BQ5.1|SYC_DESVH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 485
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/490 (44%), Positives = 296/490 (60%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYNS++++KELFTP VPGKV MYVCG+TAYDL H+GHAR+AV FD+L RYL H +V
Sbjct: 1 MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RNFTDVDDKII+RAN+ G ++ +Y + DM L L +P+ + H+ ++
Sbjct: 61 TFARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 IALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW SPWG GRPGWHIECSAMS ++ DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YWMHNG V + EKMSKSLGNF TIR I E Y P LR FL++ HYRSP
Sbjct: 241 TEAALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++++ +D A ++ IY+ L S + + AE + L F +
Sbjct: 301 IDFTFDSMDEAEKSLKRIYEALSLARTERSRSKWSATPLPADVTAE--FDTLDRAFDEAL 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ L F ++ +N L K + + L+L+E L + + +VL + G
Sbjct: 359 EDDLNTAAALGHVFG-TIRLVNRLLED-KNLRKSAETLALLERLDGLVAKWMKVLGVFGR 416
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P L LK+ ++R + V L+EER + R KDF+++D IR +L GI
Sbjct: 417 EPEA----FLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGIE 472
Query: 498 LMDMGKETIW 507
+ D +W
Sbjct: 473 VRDTPSGAVW 482
>gi|357406814|ref|YP_004918738.1| cysteinyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351719479|emb|CCE25155.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Methylomicrobium
alcaliphilum 20Z]
Length = 462
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 306/493 (62%), Gaps = 37/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKELF P + GK G+YVCG+T YD H+GHAR V FD++ RYL +L +
Sbjct: 2 LKIYNTLTRQKELFKPRLEGKAGLYVCGMTVYDYCHVGHARVMVVFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA D GE+ SL+ R+ + D L LPP +P+ + + +I
Sbjct: 62 TYVRNVTDIDDKIIQRARDNGEDFQSLTERFIEAMHEDERALSVLPPDIEPKATQSIPEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I N AYV GDVF++V K NYGRLSG+ L +AGERV ++ K++P DF
Sbjct: 122 LAMIEKLIANGIAYVGSNGDVFYSVSKFSNYGRLSGKNLAELQAGERVEIEQAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSTGCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V N EKMSKSLGNFFT+R++ +RY +R F++++HYRSP
Sbjct: 242 SEGATGEKFVNYWMHNGFVRINEEKMSKSLGNFFTVREVLKRYRSEVVRFFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHAR 376
LNYS LD A+ A+ +Y +L+ + F+ E AR F
Sbjct: 302 LNYSNEHLDEAAVALTRLYTSLRGIDAG--EFEVEADYEAR---------------FREA 344
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT L+ F A LN +K KQ+ L ++R + +LG
Sbjct: 345 MDDDFNTPVALSVLFDMA-----RELNKVKDSD-KQRASQLAATIRGLGG-------VLG 391
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+L A + LK+ + LT E + LI+ R A+KNK+++++D+IR L ++G+
Sbjct: 392 ILQDDAE----RFLKEGDNQAEGLTAEQIETLIQARIDAKKNKNWAEADKIRDQLKQQGV 447
Query: 497 ALMDM-GKETIWR 508
L D+ G T WR
Sbjct: 448 ILEDVPGGGTNWR 460
>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 493
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/492 (46%), Positives = 297/492 (60%), Gaps = 9/492 (1%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++IYN++T+ KE F P G V MYVCG T Y+ HLG+AR V FD + RY + +
Sbjct: 7 VMEIYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGFK 66
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YV+NFTDVDDKII RA + G +PL+L+N+Y EY VD L L P+VS+H+++
Sbjct: 67 VKYVQNFTDVDDKIINRAKEEGMDPLALANKYINEYFVDADALNVLRADVHPKVSEHIKE 126
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I D+I + AY V+GDV+FAV P YG+LSG+ LE+ +AG RV VD RK++P DF
Sbjct: 127 IIDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRNLEDMQAGARVEVDVRKKDPMDF 186
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW+SPWGPGRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQ
Sbjct: 187 ALWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLIFPHHENEIAQ 246
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+C YWMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSP
Sbjct: 247 SEASCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILDKFPPDVVRWFLLSTHYRSP 306
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++ +L A + I ++ AL GK A + + LR EF M
Sbjct: 307 LDFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDAARFKGKLAALRSEFEQAM 366
Query: 378 SDDLNTSHILTGAFQDALKFINSSL-NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT+ ++ F + K IN + N+ P +QL L VK+ +LG
Sbjct: 367 DDDFNTALAIS-VFFELSKEINILVGNLGGVVTPAARQL-----LADAHALVKDFNYVLG 420
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+L S L L + K +L + V +I+ R AR KD++ +D IR L GI
Sbjct: 421 ILKEDQTSGRL--LLEAPAKDDKLVDALVQLIIKIRQEARGKKDWATADAIRDGLKELGI 478
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 479 ILEDTPQGVRWK 490
>gi|390950398|ref|YP_006414157.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426967|gb|AFL74032.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 462
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/491 (46%), Positives = 301/491 (61%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QKE F PI PGKV MYVCG+T YD HLGHAR V FD++YRYL+ L +V
Sbjct: 2 LQIHNTLTRQKETFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRA + GE +L+ R+ Q D L LPPT +PR + HM+ I
Sbjct: 62 TYIRNITDIDDKIIRRAAENGEPFPALTERFIQAMHEDSETLGILPPTDEPRATAHMDDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI +I+ AYV + GDV++AV + P+YG+LSG+ ++ R+G RV + KR+P DF
Sbjct: 122 LDMIQTLIDKGFAYVADNGDVYYAVSRFPDYGKLSGKNPQDLRSGARVEIGEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK EP+WDSPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKAAKPDEPAWDSPWGAGRPGWHIECSAMSTCALGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R+I +RY P +R+F++++ YRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYRPEEIRYFILTSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L +A A+ Y L+ + P + R+ FHA M
Sbjct: 302 LNYDDEHLQNARSALTRFYTALRGL-------------PSVEPVGGET---FRERFHAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F + +N ++ +E + E++ + +LG+
Sbjct: 346 DDDFNTPEALAVLFD-----LAREINRVRADD--------LERAAALGAELRRMGEVLGI 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + L+ A L D+ LI +R AAR K+++++D+IRA LT GI
Sbjct: 393 LQ----DDAERYLRGDATA-GGLANADIDDLIAQRIAARAAKNWAEADRIRAVLTEAGIV 447
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 448 LEDNPQGTIWR 458
>gi|392407156|ref|YP_006443764.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620292|gb|AFM21439.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 474
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 304/493 (61%), Gaps = 24/493 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T++K+ F P+ GKVG YVCG T YD H+G+AR V FD L RY+EH
Sbjct: 1 MGLMLYNDLTRRKDEFIPLHQGKVGFYVCGPTVYDYIHIGNARPFVVFDTLRRYMEHKGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDK+I +AN+LG L+ R+ + Y D+ L T P ++H++
Sbjct: 61 EVVYVQNFTDIDDKMINKANELGITVKELAERFIKAYFEDVTPLGVRHATVHPLATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +I++I+ AYVVEG+V+F V+ P YG+LSGQ LE +AG R+ VD+RK++P D
Sbjct: 121 EIIALISRIMERGHAYVVEGNVYFDVKSFPGYGKLSGQGLEELQAGARIEVDARKKHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWGPGRPGWHIECSAM+ YL DIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKARKPGEPWWDSPWGPGRPGWHIECSAMAMKYLGETIDIHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG++ N EKMSKSLGN T R++ +Y PLA+R F++ AHYRS
Sbjct: 241 QSEAATGKQFVRYWIHNGYLLINKEKMSKSLGNILTARELIGKYQPLAVRLFILGAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAEDCINKLRDEFHA 375
PL++S L A ++ Q L++C L + E + + +D I K +F
Sbjct: 301 PLDFSEESLTQAVRSM----QRLRNCYSDLIFYMERSEEKDTPDTWLDDVIRKGYIKFCE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+ DD NT+ L F+ I LN K + +LI + +K + V+E++ ++
Sbjct: 357 ALDDDFNTAGALGSVFE-----IVRDLNNYLKDSASLDKNALINA-KKFFDAVEEIMGVI 410
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+ A +E EL+ +++ +LI+ER AR+ +DF+++D IR +L KG
Sbjct: 411 GIDTIFATAE-------------ELSPDEIEKLIKERNEARRKRDFARADAIRNELASKG 457
Query: 496 IALMDMGKETIWR 508
I L D T W+
Sbjct: 458 IILEDTPLGTRWK 470
>gi|451979646|ref|ZP_21928061.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451763174|emb|CCQ89258.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 480
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 295/495 (59%), Gaps = 22/495 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL+I+N++T KE F P+ PGKV MYVCGVT YD SH+GHARAA+ FD LYRYL+H
Sbjct: 1 MTLRIFNTLTGNKEEFVPLSPGKVRMYVCGVTVYDYSHVGHARAAIVFDTLYRYLKHAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTD+DDKII RA + ++++Y + DM L PT +P ++H+
Sbjct: 61 DVTYVRNFTDIDDKIINRAREQNVPWQEVTHKYIDAFYEDMDALNVERPTTEPLATEHIG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ AY EGDV+++V+ P YGRLS + +E+ +AG RV K++P D
Sbjct: 121 DMIKMIEGLVKAGKAYPAEGDVYYSVKAFPEYGRLSKRNIEDMQAGARVEPGEHKKDPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEP+WDSPWGPGRPGWHIECSAMS L FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKSKPGEPAWDSPWGPGRPGWHIECSAMSYQLLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QSC V YW+HNG V N EKMSKSLGNFFTIR I + +HP LR FL++ HYR
Sbjct: 241 QSCGFTGKPPVRYWVHNGFVNINKEKMSKSLGNFFTIRDILKTFHPEVLRLFLLTNHYRG 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--LRDEFH 374
P+++S L A + Y+ E A +G A I AED + L +F
Sbjct: 301 PIDFSDQYLKDAEKNLDRFYEFFAQAESAQG--SRNGGAAEI---AEDTLRSQPLLKKFD 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L ++ L+ +N L ++ + ++ + ++ ++
Sbjct: 356 EAMDDDFNTAVALADMMEE-LRRLNKQLG---------EEGTDRDAFHRDAATLRHAGQL 405
Query: 435 LGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
LGL P Y ++ LK +L + QLI ER AAR +KDF+ +D+ R +L
Sbjct: 406 LGLFYRTPEEYKTEIRALKGGG---QDLDVARIEQLIAERQAARSSKDFATADRCRDELQ 462
Query: 493 RKGIALMDMGKETIW 507
+ G+ L D T W
Sbjct: 463 KMGVVLKDTKTGTTW 477
>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|109894912|sp|Q2Y7U5.1|SYC_NITMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 464
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/496 (45%), Positives = 297/496 (59%), Gaps = 47/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS+ ++K+ F P+ PGKV +YVCG+T YD HLGHAR V FD++ R+ + +V
Sbjct: 2 LKIHNSLAREKQEFIPLTPGKVKVYVCGMTVYDYCHLGHARVMVVFDMVQRWFRANRFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + E+ +L+ R+ Q D A L PP+++PR + H+E +
Sbjct: 62 TYVRNITDIDDKIIRRAQENKESIEALTARFIQAMEEDAAALGVEPPSWEPRATRHVEDM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AY GDV++AV + P YG+LSG+ L+ RAGERV VD K +P DF
Sbjct: 122 IAMIQVLVDKKLAYPASNGDVYYAVHRFPGYGKLSGKSLDELRAGERVIVDPHKNDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP WDSPWGPGRPGWHIECSAM HYL FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPQWDSPWGPGRPGWHIECSAMGEHYLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG V N+EKMSKSLGNFFT+R+I + P +R F++ AHYRSP
Sbjct: 242 SEGAHGHPFVNYWMHNGFVRVNDEKMSKSLGNFFTVREILAHFQPEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ +QL+ A A+ +Y L+ EV + D + F M
Sbjct: 302 LNYADMQLEDAGRALDRLYTALKGIEVH-------------DEVEIDWDDPYASRFREAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L F + + +N K + P+ ++L+++L +LGL
Sbjct: 349 NDDFNTPEALAVLFD-----LATEVN--KTRLPR--DIALMKALGG----------VLGL 389
Query: 438 LPPGAYSEVLQQLKDKALKRAE-----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
LQQ K ++A+ E V QLI++R AR NKD+ ++D+IR +L
Sbjct: 390 ---------LQQDPWKYFQQADSEDPAFAPEKVEQLIQQRLVARANKDYREADRIRKELM 440
Query: 493 RKGIALMDMGKETIWR 508
I L D T WR
Sbjct: 441 EANIILEDGPHGTTWR 456
>gi|333922423|ref|YP_004496003.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333747984|gb|AEF93091.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 486
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/491 (46%), Positives = 297/491 (60%), Gaps = 9/491 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+ KE F P G V MYVCG T Y+ HLG+AR V FD + RY + +V
Sbjct: 1 MEIYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGFKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTDVDDKII RA + G +PL+L+N+Y EY VD L L P+VS+H+++I
Sbjct: 61 KYVQNFTDVDDKIINRAKEEGMDPLALANKYINEYFVDADALNVLRADVHPKVSEHIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I + AY V+GDV+FAV P YG+LSG+ LE+ +AG RV VD RK++P DFA
Sbjct: 121 IDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRDLEDMQAGARVEVDVRKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWGPGRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A+C YWMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSPL
Sbjct: 241 EASCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILDKFPPDVVRWFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L A + I ++ AL GK A + + LR EF M
Sbjct: 301 DFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDAARFKGKLAALRSEFEQAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSL-NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F + K IN + N+ P +QL L VK+ +LG+
Sbjct: 361 DDFNTALAIS-VFFELSKEINILVGNLGGVVTPAARQL-----LADAHALVKDFNYVLGI 414
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L S L L + K +L + V +I+ R AR KD++ +D IR L GI
Sbjct: 415 LKEDQTSGRL--LLEAPAKDDKLVDALVQLIIKIRQEARGKKDWATADAIRDGLKELGII 472
Query: 498 LMDMGKETIWR 508
L D + W+
Sbjct: 473 LEDTPQGVRWK 483
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/495 (45%), Positives = 295/495 (59%), Gaps = 42/495 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+QKE F PI PGKV MYVCG+T YDL H+GHAR +FD++YR+L+
Sbjct: 2 IMLSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGY 61
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRN TD++DKII+RA + G P L + D A L LPPT++PR + H+
Sbjct: 62 DVNYVRNITDIEDKIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVG 121
Query: 137 QIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI Q+I N AY GDV++AV + YG+LSG+ L+ RAGERV VD KR+P
Sbjct: 122 GMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPL 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKAAK GEPSWDSPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEI
Sbjct: 182 DFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YW+HNG + + EKMSKSLGNFFTIR + + + +R F++ +HYR
Sbjct: 242 AQSEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIVRSHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGKTARINPAAEDCINKLRDEF 373
SP+NY+ L+ A + +Y L+ E+ S + H AR F
Sbjct: 302 SPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAAR---------------F 346
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M DD TS + F+ + +N K + P+ +L +K++
Sbjct: 347 KAAMDDDFGTSEAVAVLFE-----LAGEVN--KSRDPQLARL------------LKDLGG 387
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGLL EV Q + EL+ E V LI+ R AR KD+++SD+IR +LT
Sbjct: 388 VLGLLTRD--PEVFLQ---GGVGEGELSAEQVEALIQARKDARAAKDWAESDRIRDELTA 442
Query: 494 KGIALMDMGKETIWR 508
KGI L D TIWR
Sbjct: 443 KGIVLEDGAGGTIWR 457
>gi|338813808|ref|ZP_08625892.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337274202|gb|EGO62755.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 480
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/494 (44%), Positives = 307/494 (62%), Gaps = 18/494 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TLK+YN++T++K F P PGKV MYVCGVT Y+ H+G+AR V++D++ RY EHL
Sbjct: 1 MTLKVYNTLTKKKGKFVPSEPGKVKMYVCGVTPYNHPHIGNARPFVTWDVIRRYFEHLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +V+NFTDVDDKII AN + ++NRY Y M L+ T PRVS+HM
Sbjct: 61 QVYHVQNFTDVDDKIINAANAEQVSWDVIANRYIASYFEVMDPLRIRRATVYPRVSEHMP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI DM+ +IN AY+ +GDV+++VEK +YG+LSG+ L++ +AG RV VD RKR+P D
Sbjct: 121 QIIDMVQTLINKGYAYLADGDVYYSVEKFHDYGKLSGRSLDDMKAGARVEVDERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+ K GEPSWDSPWGPGRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSVKPGEPSWDSPWGPGRPGWHIECSAMSFHYLGKSFDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCA--ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
QS A C++ V YW+HNG +T N EKMSKSLGNFF ++ I + P LR F++S HY
Sbjct: 241 QSEAFCGCEEPCVHYWLHNGFITVNEEKMSKSLGNFFLVKDILTHFSPEVLRFFIVSTHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPL++S +L A ++ + +T Q+ L+ G + + + + + EF+
Sbjct: 301 RSPLDFSDERLAEAGRSLERL-KTAQENLKYLATLPA-GAASEGSHTLTEAAQRAKTEFY 358
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ + + F + +N+ + + S +++ ++ E +K +
Sbjct: 359 EAMDDDFNTALVTSVMFG-----LAKEINIYHHEVVNGRVGSDLQACKEAEQALKVMADT 413
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LG VLQ+ ++ + EL E+ + +I R AR+ KD++ +DQIR L
Sbjct: 414 LG---------VLQENSARSDENQELVEQLMQLIITIRQEARQKKDWATADQIRDRLHDA 464
Query: 495 GIALMDMGKETIWR 508
GI L D + W+
Sbjct: 465 GIVLEDSPQGARWK 478
>gi|61216275|sp|Q7NX82.2|SYC_CHRVO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 457
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/493 (45%), Positives = 294/493 (59%), Gaps = 42/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F PI PGKV MYVCG+T YDL H+GHAR +FD++YR+L+ +V
Sbjct: 2 LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD++DKII+RA + G P L + D A L LPPT++PR + H+ +
Sbjct: 62 NYVRNITDIEDKIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVGGM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q+I N AY GDV++AV + YG+LSG+ L+ RAGERV VD KR+P DF
Sbjct: 122 VAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSWDSPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YW+HNG + + EKMSKSLGNFFTIR + + + +R F++ +HYRSP
Sbjct: 242 SEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIVRSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGKTARINPAAEDCINKLRDEFHA 375
+NY+ L+ A + +Y L+ E+ S + H AR F A
Sbjct: 302 VNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAAR---------------FKA 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD TS + F+ + +N K + P+ +L +K++ +L
Sbjct: 347 AMDDDFGTSEAVAVLFE-----LAGEVN--KSRDPQLARL------------LKDLGGVL 387
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL EV Q + EL+ E V LI+ R AR KD+++SD+IR +LT KG
Sbjct: 388 GLLTRD--PEVFLQ---GGVGEGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKG 442
Query: 496 IALMDMGKETIWR 508
I L D TIWR
Sbjct: 443 IVLEDGAGGTIWR 455
>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 475
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 304/493 (61%), Gaps = 23/493 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T++KE F P+ PG++G YVCG T YD H+G+AR V FD L RY+E+
Sbjct: 1 MGLVLYNDLTRRKEEFAPVSPGRIGFYVCGPTVYDYIHIGNARPFVVFDALRRYMEYKGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDK+I +AN LG L+ ++ + Y D+ L T P+ ++H++
Sbjct: 61 EVIYVQNFTDIDDKMINKANQLGITVKELAEQFIEAYFEDIIPLGVRQATVHPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I++II N AY+++G+V+F V+ PNYG+LSGQ LE +AG R+ VD RKR+P D
Sbjct: 121 DIIRLISRIIENGHAYIIDGNVYFDVKSYPNYGKLSGQSLEELQAGARIEVDERKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECSAM+ YL DIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKAKKEGEPWWDSPWGHGRPGWHIECSAMAMKYLGDTIDIHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA V +W+HNG++ N EKMSKSLGN +R+I + + PLA+R F+++AHYRS
Sbjct: 241 QAEAATGKQFVRFWIHNGYLLINKEKMSKSLGNILNVREIRKNFQPLAVRLFILAAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAEDCINKLRDEFHA 375
PL++S L A+ ++ Q L++C L + E + + ED +N F
Sbjct: 301 PLDFSDDSLIQATKSL----QRLRNCYSDLLFYMERSQEKNTPDTWLEDVVNNGYKRFCN 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+ DD NT+ L GA + ++ +N N LK+ + +Q +L K ++ + V IL
Sbjct: 357 ALDDDFNTAGAL-GAVFEVVRDLN---NYLKENETLDKQ-----ALIKSKDFFETVENIL 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G++ E L+ ++ LI+ER AARK +DF+++D IR +L KG
Sbjct: 408 GVIGINTIGEEFA---------GTLSSSEIEGLIKEREAARKKRDFARADAIRNELASKG 458
Query: 496 IALMDMGKETIWR 508
I L D T W+
Sbjct: 459 IILEDTPLGTRWK 471
>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|187629811|sp|A1VDQ5.1|SYC_DESVV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 485
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/494 (44%), Positives = 297/494 (60%), Gaps = 17/494 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYNS++++KELFTP VPGKV MYVCG+TAYDL H+GHAR+AV FD+L RYL H +V
Sbjct: 1 MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RNFTDVDDKII+RAN+ G ++ +Y + DM L L +P+ + H+ ++
Sbjct: 61 TFARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 IALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEPSW SPWG GRPGWHIECSAMS ++ DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YWMHNG V + EKMSKSLGNF TIR I E Y P LR FL++ HYRSP
Sbjct: 241 TEAALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDC---INKLRDEF 373
++++ +D A ++ IY+ L E G++ P D + L F
Sbjct: 301 IDFTFDSMDEAEKSLKRIYEALSLART------ERGRSKWSATPLPADVTAEFDTLDRAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ DDLNT+ L F ++ +N L K + + L+L+E L + + +VL
Sbjct: 355 DEALEDDLNTAAALGHVFG-TIRLVNRLLED-KNLRKSAETLALLERLDGLVAKWMKVLG 412
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+ G P L LK+ ++R + V L+EER + R KDF+++D IR +L
Sbjct: 413 VFGREPEA----FLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAA 468
Query: 494 KGIALMDMGKETIW 507
GI + D +W
Sbjct: 469 LGIEVRDTPSGAVW 482
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89.1|SYC_HALHL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 295/493 (59%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS+T KE F PI PG+V +YVCG+T YD HLGHARA V FD + RYL L EV
Sbjct: 2 LKIHNSLTGAKEPFQPIEPGQVRIYVCGMTVYDFCHLGHARALVVFDAVVRYLRWLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE +L++R+ + D + L PP ++PR ++ +E +
Sbjct: 62 TYVRNITDIDDKIIRRAAENGEPMTALTDRFIRAMHEDCSALGVEPPDHEPRATERLESM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AYV + GDV+F+V P YG+LSG+R+E R+G R+ D K +P DF
Sbjct: 122 IALIEELIAGGHAYVGDNGDVYFSVASFPEYGKLSGRRVEELRSGSRIEPDEAKHDPVDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK+GEP+W SPWG GRPGWHIECSAMS L S FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKSGEPAWPSPWGDGRPGWHIECSAMSRDLLGSHFDIHGGGVDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNGHV ++EKM+KSLGNFFT+R + + +R FL+S+HYRSP
Sbjct: 242 SECASGHRFVNYWMHNGHVRIDDEKMAKSLGNFFTVRDVLAEHPAEVVRLFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ LD A + +Y L+ PAA ++ R+ F M
Sbjct: 302 LNYTGDALDEARGGLERLYNALRGL-----------------PAAAPARSQARERFREAM 344
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F A +N L++ S LR++
Sbjct: 345 DDDFNTREALAVLFDGA-----REINRLREAGDASGAASAAAELREL------------- 386
Query: 438 LPPGAYSEVLQQLKDKALKR--AELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GA +LQQ + L+ A+ E++ L+ +R AARK KDF+++D+IR +L +G
Sbjct: 387 ---GAVLGLLQQDPEAYLRGDVADAEAEEIESLVAQRTAARKAKDFAEADRIRDELQARG 443
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 444 IELEDTPEGTKWR 456
>gi|352684343|ref|YP_004896328.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
gi|350278998|gb|AEQ22188.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
Length = 474
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/492 (45%), Positives = 296/492 (60%), Gaps = 28/492 (5%)
Query: 25 MTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
MT++KE F P+ PGKVG+YVCGVT Y+ H+G+AR V +D+++R+LEH +VT+V+NF
Sbjct: 1 MTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEGYDVTHVQNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TDVDDKIIR AN G ++NRY + Y M L PRVSDH+ I + Q
Sbjct: 61 TDVDDKIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHIPDIIHTVQQ 120
Query: 145 IINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAK 204
+I++ YVV+GDV++ VEK +YG LSG+ L++ AG RV VD RK NP DFALWK+AK
Sbjct: 121 LIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDERKENPMDFALWKSAK 180
Query: 205 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS-CAACQ 263
GEPSWDSPWG GRPGWHIECS MS YL S FD HGGG DLIFPHHENEIAQS A C
Sbjct: 181 PGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPHHENEIAQSEGATCC 240
Query: 264 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 323
V YW+HNG +T N EKMSKSLGNFFT+ I + Y P LR+F++ HYRSPL++S
Sbjct: 241 HPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRYFILQTHYRSPLDFSDA 300
Query: 324 QLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-----AAEDCINKLRDEFHARMS 378
+L AS ++L+ A E + P A + ++ + F M
Sbjct: 301 RLKEAS-------RSLERLRTAAQNLTELKGVISVGPDEDSLALREKVSGFVESFLEAMR 353
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NTS ++ F + +N+L + Q + + ++ KE+ I+G+L
Sbjct: 354 DDFNTSLAISYLFA-----LGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEMTSIIGIL 408
Query: 439 P--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
PGA +E A+K A+ + LI ER ARK KDF K+D IR +L +KGI
Sbjct: 409 EEDPGAKTE--------AVKDADEDAAAIESLIAERQEARKAKDFKKADAIRDELAQKGI 460
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 461 LLEDTPQGVRWK 472
>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|187629810|sp|A4J0Y9.1|SYC_DESRM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 486
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 298/490 (60%), Gaps = 7/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++ + KE F P G V MYVCG T Y+ HLG+AR V FD + RY + +V
Sbjct: 1 MQIYNTLARAKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTDVDDKII RA + +PL L+ +Y QE+ VD L + P+VS+H+E+I
Sbjct: 61 DYVQNFTDVDDKIINRAAEEKIDPLELAQKYIQEFFVDADALNVMRADTHPKVSEHIEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I ++ + AYVV+GDV+FAV YG+LSG+ LE+ +AG RV VD RK++P DFA
Sbjct: 121 IDLIKRLEDQGHAYVVDGDVYFAVRSFAEYGKLSGRSLEDMQAGARVEVDPRKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSWDSPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPSWDSPWGSGRPGWHIECSAMAEKYLGNGFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC+ YWMHNG +T N EKMSKSLGNFF +R+I ++ P +R +L+S HYRSPL
Sbjct: 241 EAACKAPFARYWMHNGFITINQEKMSKSLGNFFLVREILAKFPPDVVRWYLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L + + I L+ A+ G+ + E+ + ++R EF M
Sbjct: 301 DFDDEKLVMSGKGLERIKTALRLLYEAMDLPVYEGEDIQGAENFEETLQRIRLEFEKAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ + F D K +N + L K L + + L + +K+ R+LG+L
Sbjct: 361 DDFNTA-LAISYFFDLAKEVNIYVGKLNSK----VTLEMRKILDQAHTLIKDFNRVLGIL 415
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
+ L L + A LTE V +I+ R AR KD+S +D IR L G+ L
Sbjct: 416 KEDKMTGKL--LIEMAGADDTLTEGLVQLIIKIRQEARSKKDWSTADAIRDGLKELGVVL 473
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 474 EDTPQGVRWK 483
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739.1|SYC_THEGJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/492 (44%), Positives = 298/492 (60%), Gaps = 20/492 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++IYN++T+QKE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MAIRIYNTLTRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RAN+ GE+P L+ ++ + +L DM L+ P PRV++HM+
Sbjct: 61 TVLMVMNFTDIDDKIIKRANETGEDPKELAEKFLRIFLEDMKALKVKPADIYPRVTEHMQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY V+F V K +YG+LS +LE+ G RV KRNP D
Sbjct: 121 DIISFIKKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YWMH G + N EKMSKSLGNF T+R++ +RY+P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELLKRYNPEVIRLFVLQRHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS ++ A + + +Y TL++ VA+S + + A + I R +F+
Sbjct: 301 PLDYSEEGIEHAKNNLERLYNTLENIRVAMSKAEISFRWDEPEFRAYEAIRDARKKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F+ + IN L ++K PK+ LRK K+V + G
Sbjct: 361 MDDDFNTAEALKAVFEVS-NAINRYLTEVEK--PKES------ILRKAWEFFKDVGEVFG 411
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L + + ++ ++AE EE + L+E RA RK K F +D+IR +L + GI
Sbjct: 412 L-----FEDYFKE------QKAENDEELINLLVEVRAQLRKEKKFDLADKIREELRKLGI 460
Query: 497 ALMDMGKETIWR 508
L D + T+W+
Sbjct: 461 QLEDTPQGTVWK 472
>gi|389720629|ref|ZP_10187458.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609525|gb|EIM38688.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
Length = 473
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 297/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWQVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE+ SL++R+ D A L CL P P+ +D+++Q+++
Sbjct: 66 VRNITDIDDKIIKRANENGESISSLTSRFIDAMNEDFAKLGCLAPDAAPKATDYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++NN AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIDTLVNNGTAYPANNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLSFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVVRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS + L A + + Y + + + E + F+A M
Sbjct: 306 VNYSDVALKEAKNTLMRFYHSFKAYQAVYGE-----------QMVETLDQSFVERFNAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ +N LN K Q ++Q +LR + N ILGL
Sbjct: 355 CDDFNTPEAIAVLFE-----LNKELNRAVKDQNQEQAAVYYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL +E ED LI++R A+K K+F+++D+IR L +G+
Sbjct: 403 VQHNVDEFLKSDIGQEALGLSEAQIED---LIQQRKDAKKEKNFARADEIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030490|sp|Q0HTK4.1|SYC_SHESR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 461
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/494 (45%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGKVGMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TD+DDKII+RAN+ E+ +L++R E D L + P ++PR + H+ +I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ +Y ++D ++ ++P AE+ + K F A M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVDLTVAP-----------APAEEFVAK----FKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK Q + +K++ +LGL
Sbjct: 349 DDDFNTPEAYSVLFD-----MVREINRLKTTDMAQASAMAV--------AMKQLADVLGL 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L Q D A + E ++++V + LI ER AR KD+ +D R L
Sbjct: 396 ---------LHQAPD-AFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNEL 445
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 446 GVVLEDGPSGTTWR 459
>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|61216136|sp|Q5QYP3.1|SYC_IDILO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
Length = 459
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 300/493 (60%), Gaps = 37/493 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L ++N++T++K+LF PI PG VG+YVCGVT YD H+GHAR V+FD++ RYL L
Sbjct: 1 MALTVFNTLTRKKQLFEPIQPGHVGIYVCGVTTYDYCHIGHARTYVAFDIVVRYLRKLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YVRN TD+DDKII+RA + GE+ ++ R+ +E D L + P +PRV+ HM+
Sbjct: 61 SVKYVRNITDLDDKIIKRAAENGEDFHQVTERFIREMHKDFDALNLVRPDIEPRVTSHMD 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I MI ++I N AY GDV F V +YG+LS Q LE +AG RV VD+ K++P
Sbjct: 121 EIILMIERLIENGNAYEAGNGDVLFDVSTFNDYGKLSRQDLEQLQAGSRVDVDAAKQDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK+AK GEPSW SPWG GRPGWHIECSAM+ +L S FDIHGGG DL FPHHENEI
Sbjct: 181 DFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNKKHLGSTFDIHGGGSDLSFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A Q V YWMH+G V +NEKMSKSLGNFFTIR + E+Y +R+FL+S+HYR
Sbjct: 241 AQSCCANQSEYVKYWMHSGMVQVDNEKMSKSLGNFFTIRSVLEQYDAETVRYFLLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNY+ LD A A+ +Y L+D ++P A+E+ +K F
Sbjct: 301 SQLNYTQENLDQAHSALERLYTALRD----ITP----------QTASEELRSKYWQSFQQ 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLN ++ F+ I +N ++ P ++ ++ + + E+ ++
Sbjct: 347 AMDDDLNAPEAMSVLFE-----IAREINRNRESAP--------DTAAQLAHVLLELAEVM 393
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL E LQ D K + LI +R AR++KD++ +D+ R +LT G
Sbjct: 394 GLLQQSP-EEFLQGDDDDVAK--------IEALIAKRNQAREDKDWAAADEARDELTNMG 444
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 445 IVLEDGAEGTRWR 457
>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|6831682|sp|O58370.1|SYC_PYRHO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 476
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 297/494 (60%), Gaps = 24/494 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL+IYN++T+QKE F PI G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MTLRIYNTLTKQKEEFKPINEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKIIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+E
Sbjct: 61 SVLMVMNFTDIDDKIIRRAKETGEDPAKLAEKFIKVFLEDMKALKVKPADIYPRVTEHIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY V+F V+K YG+LSG +LE R G RV K+NP D
Sbjct: 121 DIIQFIERLKEKGYAYEGSDGVYFEVQKFKEYGKLSGVKLEELRKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVHYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS L A + + +Y TL++ +A+ + + A + I + R +F+
Sbjct: 301 PLDYSEEGLQHAKNNLERLYNTLENIRIAMENAELAYTWDENDFKAYNSIKEARRKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ +++++N + + ++PK+ LRK + V I
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAINKYITEAEKPKES------VLRKAWEFFRTVGEI 409
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
G+ + ++A+ E+ + LI+ RA RK + F +D+IR +L +
Sbjct: 410 FGIF-----------EEYFKEEKAKEEEKLIELLIQVRAELRKERKFELADKIREELRKL 458
Query: 495 GIALMDMGKETIWR 508
GI L D GKETIW+
Sbjct: 459 GIQLEDKGKETIWK 472
>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123029526|sp|Q0HH98.1|SYC_SHESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/494 (45%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGKVGMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TD+DDKII+RAN+ E+ +L++R E D L + P ++PR + H+ +I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHITEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ +Y ++D ++ ++P AE+ + K F A M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVDLTVAP-----------APAEEFVAK----FKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK Q + +K++ +LGL
Sbjct: 349 DDDFNTPEAYSVLFD-----MVREINRLKTTDMAQASAMAV--------AMKQLADVLGL 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L Q D A + E ++++V + LI ER AR KD+ +D R L
Sbjct: 396 ---------LHQAPD-AFFKGEGSDDEVAEIEALIVERNRARVEKDWPAADVARNRLNEL 445
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 446 GVVLEDGPSGTTWR 459
>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|61216300|sp|Q82Y45.1|SYC_NITEU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
Length = 465
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/498 (44%), Positives = 299/498 (60%), Gaps = 44/498 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIY+++T+ + F P+ PG+V MYVCG+T YD HLGHAR V FD + R+L+ L +V
Sbjct: 2 LKIYDTLTRSRREFIPLTPGEVRMYVCGMTVYDYCHLGHARVLVVFDSVVRWLQTLGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + E +L+ RY Q D L + P+++PR +++++ +
Sbjct: 62 IYVRNITDVDDKIIRRALENHEPFSALTARYIQAMEEDAMALGVISPSFEPRATEYVDSM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++N + AYV GDVF+ V + P YG+LSG+ L++ RAGERV +D+ KR+P DF
Sbjct: 122 IAMIESLLNRELAYVASNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSWDSPWG GRPGWHIECSAMS HYL +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSEHYLGDQFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S S+V+YWMHNG V +NEKMSKSLGNFFT+R++ RY P +R F++ AHYRSP
Sbjct: 242 SEGVHGHSHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLTRYQPEVVRFFIVRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTL------QDCEVALSPFQEHGKTARINPAAEDCINKLRD 371
LNYS L+ A A+ +Y L QD EVA TA I+ E+ + R
Sbjct: 302 LNYSDAHLNDARSALERLYTVLKNHAPSQDSEVA---------TAVID--WENNVYARR- 349
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F + M+DD NT + F A E+ R ++ +
Sbjct: 350 -FMSAMNDDFNTPEAVAVLFDLA-----------------------SEANRTGDSHYASL 385
Query: 432 LRIL-GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
L+ L G+L L+ + + E++ +I++R ARK ++F+++D +R
Sbjct: 386 LKALGGVLGLLQQPPQQYLQYPAHLQDGQYSVEEIENMIQQRLQARKERNFAQADTLRQQ 445
Query: 491 LTRKGIALMDMGKETIWR 508
L GI L D + T WR
Sbjct: 446 LAEAGIILEDSPQGTTWR 463
>gi|334338878|ref|YP_004543858.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334090232|gb|AEG58572.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 486
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/493 (45%), Positives = 301/493 (61%), Gaps = 7/493 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+ KE F P PG+V MYVCG T Y+ HLG+AR V FD + RY + +V
Sbjct: 1 MEIYNTLTRLKEEFIPGEPGQVKMYVCGPTTYNFIHLGNARPLVFFDTVRRYFMYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDVDDKII RA +PL+L+ +Y E+ VD L L P+VS+H+++I
Sbjct: 61 YYIQNFTDVDDKIINRAKKENLDPLALAKKYINEFFVDGDALNVLRADRYPKVSEHIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I + AY VEGDV+F+V P YG+LSG+ LE+ +AG RV VD RK++P DFA
Sbjct: 121 INLIKLLQERGHAYEVEGDVYFSVRSFPGYGKLSGRSLEDMQAGARVEVDPRKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK EPSW SPWG GRPGWHIECSAM+ YL S FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPEEPSWQSPWGNGRPGWHIECSAMAGKYLGSGFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC+ YWMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSPL
Sbjct: 241 EAACKQPFARYWMHNGFITVNQEKMSKSLGNFFLVREILDKFPPDVIRWFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L A + I L+ A+ + A + + + LR EF M
Sbjct: 301 DFDDEKLAVAGRGLERIKTALRLLYEAMERPASGEEEAGAGSSFHEKLTLLRLEFEKAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F+ A K IN +N + K + L ++ + + VKE R+LG+L
Sbjct: 361 DDFNTALAISVFFELA-KEINILVNGMGDKISPEAVL----AMEQAHDLVKEFNRVLGVL 415
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
S L + + + + LTE V +I+ R AR KD+S +D IR L GI L
Sbjct: 416 KEDPVSGKL--VLETSGEDDGLTEGLVQLIIKIRQEARSKKDWSTADTIRDGLKELGIIL 473
Query: 499 MDMGKETIWRPCV 511
D + W+ V
Sbjct: 474 EDTPQGVRWKKQV 486
>gi|344940190|ref|ZP_08779478.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344261382|gb|EGW21653.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 492
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/494 (46%), Positives = 298/494 (60%), Gaps = 39/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T++KE F P V GKVGMYVCG+T YD H+GHAR V FD + RY H E+
Sbjct: 32 LKIYNTLTRKKEPFQPRVAGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHQGYEL 91
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE+ L+ R+ D L LPP +PR + + I
Sbjct: 92 TYVRNITDIDDKIIQRAIENGEDYGKLTERFIDAMHEDERALAVLPPDLEPRATQSIADI 151
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ D AYV GDVF+AV K +YGRLSG+ L++ +AGERV VD KRNP DF
Sbjct: 152 ISMIKTLVDKDLAYVGSNGDVFYAVTKFKDYGRLSGKNLDDLQAGERVDVDLAKRNPMDF 211
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EP+WDSPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 212 VLWKMAKANEPAWDSPWGLGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 271
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V ++EKMSKSLGNFFT+R++ +Y P +R F++S+HYRSP
Sbjct: 272 SEGATGEKFVNVWMHNGFVRVDDEKMSKSLGNFFTVREVLNQYKPEIIRFFILSSHYRSP 331
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS QL+ A A+ +Y L+ E E R F M
Sbjct: 332 LNYSDEQLNDAKAALTRLYTALRGVETTAEAAIEEAYKTR---------------FEQAM 376
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F D + +N + K+ +Q+ +L +L+ + +LG+
Sbjct: 377 DDDFNTPVALAVLF-DLARDLNKA-----KELDQQKACALAATLKYLSG-------LLGI 423
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ L+ D A+ L EE V Q I+ R A+K KD++ +D+IR DL +G
Sbjct: 424 LQDDPDAF---LKGSGDAAV----LGEETVEQQIQARLDAKKAKDWALADKIRNDLKEQG 476
Query: 496 IALMDMGKETI-WR 508
+ L D T WR
Sbjct: 477 VILEDSPDGTTSWR 490
>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 476
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 297/494 (60%), Gaps = 24/494 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN++T++KE F PI G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MSLKVYNTLTKRKEEFKPIREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKIIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+
Sbjct: 61 TVLMVMNFTDIDDKIIRRARETGEDPKELAEKFIKVFLEDMNALKVKPADIYPRVTEHIG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++ AY + V+F V+K YG+LSG ++E R G RV K+NP D
Sbjct: 121 DIIDFIKKLEEKGYAYEGKDGVYFEVQKFKEYGKLSGIKIEELRKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+YS L A + + +Y TL++ +A+ + + + I R +F+
Sbjct: 301 PLDYSEEGLQHAKNNLERLYNTLENIRIAMERAELAYTWDEDDYEVYEAIKNARKKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ +++++N + +K++PK+ LRK K V I
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAINKYLTEKERPKEA------ILRKALEFFKVVSEI 409
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
G+ Y + ++ ++ L + L++ R+ RK K F +D+IR +L R
Sbjct: 410 FGIFED--YFKEEKREIEEELIKV---------LVDVRSQLRKEKRFDLADKIREELRRL 458
Query: 495 GIALMDMGKETIWR 508
GI L D G+ET+W+
Sbjct: 459 GIQLEDRGQETVWK 472
>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 483
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 290/499 (58%), Gaps = 18/499 (3%)
Query: 13 PKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLE 72
P+ LK+YN++T+QKE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLE
Sbjct: 2 PRGKNMLKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLE 61
Query: 73 HLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVS 132
H V V NFTD+DDKII+RA + GE+P L+ R+ + +L DM L+ P PRV+
Sbjct: 62 HKGYTVLMVMNFTDIDDKIIKRARETGEDPKELAERFIKIFLEDMEALKVKPADIYPRVT 121
Query: 133 DHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
DH++ I + I ++ AY ++F V+K P YG+LSG ++E+ + G RV K+
Sbjct: 122 DHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEGKK 181
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
NP DFALWK AK GEP WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHE
Sbjct: 182 NPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHE 241
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS A V YW+H G V EKMSKSLGNF TIR++ +RY P +R F++
Sbjct: 242 NEIAQSEACFGHEWVKYWLHTGFVMVKGEKMSKSLGNFVTIRELLKRYEPEVIRFFVLQK 301
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYRSPL Y+ L A + + +Y TL++ VAL + + + I + + +
Sbjct: 302 HYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELEFKTYEIIREGKRK 361
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F+ M DD NT+ L F+ A IN L K PK+ L KI +EV
Sbjct: 362 FYEAMDDDFNTAEALKAVFEVA-NAINKYLTEANK--PKESILRKALEFFKIVSEV---- 414
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
G + + ++ + + +L E L+E R RK K + +D IR +L
Sbjct: 415 -------FGVFEDYFREETKEREESEKLIE----LLVEVRKQLRKEKRYELADMIREELK 463
Query: 493 RKGIALMDMGKETIWRPCV 511
+ GI L D G ET W+ +
Sbjct: 464 KLGIQLEDRGSETTWKRII 482
>gi|442803750|ref|YP_007371899.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739600|gb|AGC67289.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 462
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/485 (43%), Positives = 292/485 (60%), Gaps = 36/485 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE F P+ PG+V MY CG T YD H+G+AR + FD+L R+LE+ +V
Sbjct: 1 MKLYNTLTKRKEEFIPLKPGEVKMYSCGPTVYDYFHIGNARPFIIFDVLRRFLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+IRRAN+ G+ ++ +Y +EY VD L PTY PR +++++ I
Sbjct: 61 IFVQNFTDIDDKMIRRANEEGKTVAEIAEKYIREYYVDAHGLGIKDPTYAPRATENIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI +++ AYVV+GDV+F K YG+LSG RLE+ G R+ VD RK N DFA
Sbjct: 121 IDMIKTLVDKGYAYVVDGDVYFKTSKFEEYGKLSGHRLEDLELGARIEVDERKENAMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSAMANRYLGETIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+HNG + NNEKMSKS GNFFT+R I + Y +R FL+SAHYRSP+
Sbjct: 241 EACNGKPFARYWLHNGFININNEKMSKSRGNFFTVRDIAKHYDYEVIRFFLLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L+ A A+ IY+ + LS A + ED L RD F
Sbjct: 301 NFSDALLEQAKSALNRIYECRDNLRFFLS-------KAEKDTFEEDIYGNLDIYRDRFIE 353
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLNT+ L F+ ++ IN+ + K+ + L L++ E+ +L
Sbjct: 354 AMEDDLNTADALAAIFE-LVREINTRITANAGKKTISKALDLLD----------ELTGVL 402
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G++ +++ +E++ LIEER AR ++F ++D+IR L + G
Sbjct: 403 GIMRKEYENDL---------------DENIRALIEERQKARAERNFKRADEIRDQLRKMG 447
Query: 496 IALMD 500
I L D
Sbjct: 448 IELQD 452
>gi|381160970|ref|ZP_09870202.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
gi|380879034|gb|EIC21126.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
Length = 466
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/492 (45%), Positives = 294/492 (59%), Gaps = 31/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYNS+T+ KE F PI PG+ MYVCG+T YDL HLGHAR V FD++YRYL+ V
Sbjct: 2 LHIYNSLTRHKEPFVPIEPGRARMYVCGMTVYDLCHLGHARVLVVFDMVYRYLQQAGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + G L+ R+ D A L PPT +PR + H+++I
Sbjct: 62 TYVRNITDIDDKIIARAAEQGIPIDQLTERFIAAMHEDAARLGVRPPTLEPRATAHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I + AYV + GDV++ V YGRLSG+ + RAG RV VD KR+P DF
Sbjct: 122 LAMVQRLIEREHAYVADKGDVYYQVSSFSGYGRLSGKDPGDLRAGARVDVDQHKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHH+NEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTQCLGNHFDIHGGGADLQFPHHDNEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N+EKMSKSLGNFFT+R+I RY P +R+F++++HYRSP
Sbjct: 242 SEGATGEPFVNIWMHNGFVRINDEKMSKSLGNFFTVREILTRYRPEEIRYFILASHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNY L+ A A+ +Y L+ A PAAE D + R F
Sbjct: 302 LNYDESNLEQARSALTRLYTALRGLPAA-------------EPAAEPDGGDAHRQRFTDA 348
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT L F + +N L+ S + + E++ + +LG
Sbjct: 349 MDDDFNTPEALAVLFD-----LAREINRLRD--------SDLSRAAALGAELRSLGAVLG 395
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L+ A + L+ D + ++ ++ LI+ R AR++KDF+++D+IR L + GI
Sbjct: 396 LVQDQA-DDFLRGGADAQPEGP--SDAEIENLIQRRVQARQDKDFAEADRIRDQLQQAGI 452
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 453 LLEDGAGGTRWR 464
>gi|333367377|ref|ZP_08459646.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 508
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 297/493 (60%), Gaps = 12/493 (2%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
TLKIY+SMT K F P+ GKVGMYVCG+T YD H+GHAR V+FD++ R+L HL +
Sbjct: 24 TLKIYDSMTTNKRSFEPLQVGKVGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGFD 83
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRN TD+DDKII RAN+ GE L+ R+ D A L C P +PR + H++
Sbjct: 84 VNYVRNITDIDDKIIARANENGEEIGQLTERFITAMHEDAAALGCESPDAEPRATQHIDD 143
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + + AY GDV++AV+ YG+LS ++LE+ +AG RV VD+ K+NP D
Sbjct: 144 MLQMIGTLEQKEHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFD 203
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAKAGEP WDS WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIA
Sbjct: 204 FVLWKAAKAGEPQWDSSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFPHHENEIA 263
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA + + WMH G + + EKMSKSLGNFFTIR++ E++HP +R F++S+HYRS
Sbjct: 264 QSEAATGCTYANNWMHVGFINVDGEKMSKSLGNFFTIREVMEKFHPETIRFFILSSHYRS 323
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-INKLRDEFHA 375
+N+S L A + +YQ L+ E L A I+ A+ D I F
Sbjct: 324 QVNFSDAALKEAHSGLTRVYQALKAAEAVLDTPVNAQSEATIDTASIDSEIRGYSANFIK 383
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT ++ F + +N L ++ Q + +++ + L I
Sbjct: 384 AMNDDFNTPQAISVLFS-----LAKEVNKLARETENDQATAKLKAAAVTLKGLAGTLNI- 437
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G + P +E LQ ++ ++T+E + LI+ER A+ NK+F+++D+IR L +
Sbjct: 438 GQVKP---TEFLQA-HIGSVDEEQMTDEQIDTLIQERIDAKANKNFARADEIRNLLQQNN 493
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 494 IELEDSKQGTTWR 506
>gi|379335352|gb|AFD03335.1| cysteinyl-tRNA synthetase [uncultured bacterium W5-15b]
Length = 480
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/490 (43%), Positives = 304/490 (62%), Gaps = 19/490 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YNS+TQ+KE KV MY CG T YD +HLGHAR+AVSFD++ R+L + +V
Sbjct: 8 ISVYNSLTQKKEEMQTHEGNKVRMYACGPTVYDSAHLGHARSAVSFDIIQRFLRYAGYDV 67
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN+TD+DDKII RAN+LG +S ++ QEY DMA + P +P+V++H+EQI
Sbjct: 68 TFVRNYTDIDDKIINRANELGVPAKEISEKFIQEYKDDMASIGVQTPDIEPKVTEHIEQI 127
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I II+ YV E DVFF+V K YG+LS + ++N G R+ V+ +K++P DFA
Sbjct: 128 IELIQTIIDRGHGYVSENDVFFSVRKFKGYGKLSKRSVDNMLEGVRIDVNEKKQDPLDFA 187
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSW SPWG GRPGWHIECS MS YL + F+IHGGG DLIFPHHENEIAQS
Sbjct: 188 LWKGAKKGEPSWPSPWGNGRPGWHIECSVMSMEYLGTNFEIHGGGKDLIFPHHENEIAQS 247
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA + +W+HNG + N+EKMSKSLGNFFT++ +R+ P ++R F +S HY++P
Sbjct: 248 EAASGEQFAKHWLHNGLIQINSEKMSKSLGNFFTVQNAVKRWTPESIRFFFLSHHYQNPA 307
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S +D ++ IY TL+ LS + ++P ++ + K R+ + M
Sbjct: 308 DFSEQVMDDTEISLERIYTTLKRAN-DLSSVSD-----SVDPELQENLEKFRENWFRAMC 361
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
D+ NT+ + F D ++ IN S++ ++L E+K+ ++G+L
Sbjct: 362 DNFNTADAIGNLF-DLVRAINKSIDA----------NGWTKTLSDTLEEIKKFSSVVGIL 410
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
E L+ K A LT E++ LIEER R +KD++++D+IR +L KGI L
Sbjct: 411 EKDP-DEYLEGRKSSANLEG-LTPEEIEVLIEERKQTRTDKDWARADEIRDELDAKGIVL 468
Query: 499 MDMGKETIWR 508
D TIW+
Sbjct: 469 EDKAGGTIWK 478
>gi|431929783|ref|YP_007242829.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431828086|gb|AGA89199.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
Length = 465
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 294/493 (59%), Gaps = 34/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYNS+T+QK +FTP+VPG+V MYVCG+T YD HLGHAR V FD++YRYL HL EV
Sbjct: 2 LQIYNSLTRQKAVFTPLVPGQVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRHLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRA + E +L+ R+ D A L LPP+ +PR + H+++I
Sbjct: 62 TYIRNITDIDDKIIRRAGENDEPIAALTERFIAAMHEDAAALGVLPPSDEPRATAHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ M+ ++ AY + GDV++AV + P YG+LSG+ + RAG RV + KR+P DF
Sbjct: 122 QAMVATLLERGLAYRADNGDVYYAVGRFPGYGKLSGKDPQELRAGSRVEIGEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTCALGAHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V WMHNG V N+EKMSKSLGNFFT+R+I RY P +R+F++++HYRSP
Sbjct: 242 SEGATGEPFVEVWMHNGFVRVNDEKMSKSLGNFFTVREILARYRPEEVRYFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L A A+ Y L+ L P + G A + FHA M
Sbjct: 302 LNYDEDHLQQARGALTRFYTALR----GLPPAEPAGGEA------------FSERFHAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD T L F+ + +N ++ + + E++ + +LG+
Sbjct: 346 DDDFATPEALAVLFE-----LVREINRVRADDEARAA--------ALGAELRRLGAVLGI 392
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P AY + D + D L E R AAR+ + ++++D++R L G
Sbjct: 393 LQGDPEAYLRGEGLVVDAGPAALDDAAIDALI--ERRTAARQARQWAEADRLRDQLQEAG 450
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 451 ILLEDGPQGTTWR 463
>gi|445414926|ref|ZP_21434004.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444764053|gb|ELW88381.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 473
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RAN+ GE+ +L++R+ Q D +L CL P PR +D+++Q+++
Sbjct: 66 VRNITDIDDKIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F VEK YGRLSG++L++ +AG ERV VD K++P DF
Sbjct: 126 MIGHLVNKGAAYPSANGDVYFEVEKFAKYGRLSGRKLDDMQAGASERVDVDVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A + Y A +Q+ + E + + F+ M
Sbjct: 306 VNFSDFALKEAKTTLSRFYH-------AFKAYQQVYADLSTDVLDETFVER----FNIAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NTS + F+ I LN K++ +Q +LR + N ILGL
Sbjct: 355 RDDFNTSEAIAVLFE-----IIKELNRAVKEENAEQATLYYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L+E D+ I++R A+KNKDF+++D+IR L +G+
Sbjct: 403 VQYNVDEFLKSDIGQEALG---LSEADITDFIQQRVDAKKNKDFARADEIRQSLLAQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|397651531|ref|YP_006492112.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30316338|sp|Q8U227.2|SYC_PYRFU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|393189122|gb|AFN03820.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 477
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 288/493 (58%), Gaps = 18/493 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+QKE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH V
Sbjct: 2 LKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+RA + GE+P L+ R+ + +L DM L+ P PRV+DH++ I
Sbjct: 62 LMVMNFTDIDDKIIKRARETGEDPKELAERFIKIFLEDMEALKVKPADIYPRVTDHIDDI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++ AY ++F V+K P YG+LSG ++E+ + G RV K+NP DFA
Sbjct: 122 IEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEGKKNPEDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+H G V EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL
Sbjct: 242 EACFGHEWVKYWLHTGFVMVKGEKMSKSLGNFVTIRELLKRYEPEVIRFFVLQKHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
Y+ L A + + +Y TL++ VAL + + + I + + +F+ M
Sbjct: 302 EYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELEFKTYEIIREGKRKFYEAMD 361
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ L F+ A IN L K PK+ L KI +EV
Sbjct: 362 DDFNTAEALKAVFEVA-NAINKYLTEANK--PKESILRKALEFFKIVSEV---------- 408
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
G + + ++ + + +L E L+E R RK K + +D IR +L + GI L
Sbjct: 409 -FGVFEDYFREETKEREESEKLIE----LLVEVRKQLRKEKRYELADMIREELKKLGIQL 463
Query: 499 MDMGKETIWRPCV 511
D G ET W+ +
Sbjct: 464 EDRGSETTWKRII 476
>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 479
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/491 (42%), Positives = 306/491 (62%), Gaps = 21/491 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+++ +KE+FTP+ KV +YVCGVT YD H+GHAR+++ FD + RYL++ +V
Sbjct: 2 LKIFNTLSGEKEVFTPLEDNKVKIYVCGVTVYDYCHIGHARSSIVFDTIRRYLKYKGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII+RAN+ ++ +++ + + + DM L L P Y PR +++++ +
Sbjct: 62 TFVKNFTDVDDKIIKRANEENKSINEITDFFIKAHDEDMDKLNILRPDYTPRATEYIDGM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ ++I AY GDV+F V +YG+LS + L++ AG RV V+ K +P DFA
Sbjct: 122 IKLCEKLIEKGFAYESNGDVYFKVRAFKDYGKLSKRDLDDLLAGARVDVNEIKEDPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEP WDSPWG GRPGWHIECS MSA L FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKRSKEGEPGWDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YW+HNG V N EKMSKSLGNFFTIR + + P LR FL++ HYRSPL
Sbjct: 242 EAAEGKEFARYWIHNGFVNINKEKMSKSLGNFFTIRDVLKEVDPEVLRFFLLTTHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A +A+ IY + + E A+ ++ + +I ++ +++ + +F M
Sbjct: 302 DFSFENLLEAENALDRIYTAIDELESAVFNNKKPAQKGKI----DEIVDRFKRDFEESMD 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR-ILGL 437
DD NT+ ++ F+ + +N+L ++ + L+ L+ EVK ++R +LG+
Sbjct: 358 DDFNTASAISNIFE-----LIKGVNLLLSERLNSEDLNY---LKVRFEEVKAIIRDVLGI 409
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L A L + E ++ +LIEER AR+NKDFSK+D IR +L KG+
Sbjct: 410 LTKTASEWFKMNLS--------IDESELQKLIEEREIARRNKDFSKADAIRNELKTKGVE 461
Query: 498 LMDMGKETIWR 508
L+D T +R
Sbjct: 462 LLDTPTGTKFR 472
>gi|414153547|ref|ZP_11409870.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454945|emb|CCO07774.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 486
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/490 (44%), Positives = 296/490 (60%), Gaps = 7/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+ K+ F P GKV MYVCG T Y+ HLG+AR V FD + RY + +V
Sbjct: 1 MQIYNTLTKTKQEFIPREKGKVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFIYKGYQV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTDVDDKII+RA + +PL L+ RY +E+ D L + P+VS+H+ +I
Sbjct: 61 NYVQNFTDVDDKIIKRAWEEQTDPLELAQRYIREFFKDADALNVMRADKHPKVSEHIAEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I Q+ AYV +GDV+FAV P YG+LSG+ LE+ +AG RV +D RK++P DFA
Sbjct: 121 IDLIKQLEQQGHAYVADGDVYFAVRSFPGYGKLSGRSLEDMQAGARVEIDPRKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW SPWG GRPGWHIECSAM+A YL + FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPSWPSPWGAGRPGWHIECSAMAAKYLGNGFDIHGGGFDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC YWMHNG +T N EKMSKSLGNFF +R+I ++ P +R +L+S HYRSPL
Sbjct: 241 EAACGQPFARYWMHNGFITVNQEKMSKSLGNFFLVREILAKFPPEVVRWYLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ +L A + + L+ AL Q+ A D + LR +F M
Sbjct: 301 DFDDEKLAMAGKGLERLKTALRLLYEALELPQQQAAMADEGGDLADKLATLRLDFEKAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F+ A K IN + L K +Q+ L+ K + K+ +LG+
Sbjct: 361 DDFNTALAISVFFELA-KEINIFVGRLDGKLTDRQKDLLV----KAHDLFKDFNGVLGVF 415
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
S L L D +L + + +++ R AAR KD++ +D IR L G+ L
Sbjct: 416 KEDQQSGRL--LIDAVNTDNKLVDGLINLIVKVRQAARSQKDWATADTIRDGLKELGVIL 473
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 474 EDTPQGVRWK 483
>gi|350552639|ref|ZP_08921836.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
gi|349793570|gb|EGZ47402.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
Length = 466
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/491 (44%), Positives = 290/491 (59%), Gaps = 29/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYNS+T++K+ F P+ PG V MYVCG+T YD HLGHAR V FD++YRYL+ V
Sbjct: 2 LHIYNSLTRKKDPFIPLTPGHVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLQAQGFNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA E L+ R+ D L LPPT++PR + H++ I
Sbjct: 62 TYVRNITDIDDKIIQRAAQNHEPIEQLTERFIAAMHEDAQALNILPPTHEPRATQHIQPI 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q++ AY D+++AV +YG+LSG++LE+ RAG RV D KR+P DF
Sbjct: 122 LHMIEQLLAKGHAYQASNQDIYYAVNSFKDYGKLSGRQLEDLRAGARVEPDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKRAKPGEPSWDSPWGLGRPGWHIECSAMSGSYLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMHNG V N EKMSKSLGNFFT+R+I RY +R+F++ +HY+SP
Sbjct: 242 SEASHDCTYVNYWMHNGFVRVNEEKMSKSLGNFFTVREILARYQAEEVRYFILGSHYKSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY QL+ A +A+ +Y L+ + + + +D R FHA M
Sbjct: 302 LNYGDEQLEQARNALTRLYTALRGLD----------RQPPTTQSEQDQTQAYRQRFHAAM 351
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + +N ++ + P Q L +L ++ ILGL
Sbjct: 352 DDDFNTPEALAVLFE-----LAHEINRVRSQDPAYAQY-LAATLYQLGG-------ILGL 398
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L S + + +++ LI +R AR +KD+ ++D+IR L +GI
Sbjct: 399 LTQDPQSYLQSGSGSDTIDASQIET-----LIAQRLQARADKDWPEADRIRDHLKTQGII 453
Query: 498 LMDMGKETIWR 508
L D G T WR
Sbjct: 454 LEDSGNTTTWR 464
>gi|372489694|ref|YP_005029259.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
gi|359356247|gb|AEV27418.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
Length = 476
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/492 (45%), Positives = 291/492 (59%), Gaps = 21/492 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ F PI GKV MYVCG+T YD HLGHAR V FD +YR+L +V
Sbjct: 2 LKIYNTIAREKQEFVPIEAGKVKMYVCGMTVYDFCHLGHARVLVVFDAVYRWLRASGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE L++R+ D A L PT++PR ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIRRAVENGETIGQLTDRFIAAMDEDAAALGVQKPTHEPRATEYVPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I Q+ N AY +GDV F+V K P YGRLSG+ L++ RAGERV VDS K++P DF
Sbjct: 122 LGLIGQLEANGLAYKAADGDVNFSVRKFPGYGRLSGKSLDDLRAGERVEVDSAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEP+W+SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKHAKAGEPAWESPWGAGRPGWHIECSAMSSDLLGKHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V ++EKMSKSLGNFFTIR + ++Y +R F++ AHYRSP
Sbjct: 242 SEGAHGCTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L K A A D F A M
Sbjct: 302 LNYSDAHLDDARQALTRLYTAL--------------KAAPAEAVAVDWNEAHAQRFQAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F + + N K Q +L L + ++ L+ +
Sbjct: 348 DDDFNTPEALAVLFD-----LANEANRSKDSAVAAQLKALAGVLGLLARSPEDYLKGRVV 402
Query: 438 LPPGAYSEVLQQLKDKA-LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
G + L + L ++E D+ I+ R A+K K+F+++D++RA+L GI
Sbjct: 403 YGSGNATMSLSGNGEGTLLVGGGISESDIEARIQARIDAKKAKNFAEADRLRAELLAAGI 462
Query: 497 ALMDMGKETIWR 508
L D + T WR
Sbjct: 463 VLEDSAQGTTWR 474
>gi|413919531|gb|AFW59463.1| hypothetical protein ZEAMMB73_732444 [Zea mays]
Length = 397
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/387 (55%), Positives = 263/387 (67%), Gaps = 22/387 (5%)
Query: 146 INNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKA 205
+ ND AY +EGDV+F+VE P Y LSG++ + N+AG RVA D+RKRNPADFALWKAAK
Sbjct: 1 MENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKE 60
Query: 206 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 265
GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA +S
Sbjct: 61 GEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFPHHENELAQSRAAYPES 120
Query: 266 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 325
V WMHNG V +++KM+KS NFFTIR IT YHPLALR FL+ HYRS +N+S L
Sbjct: 121 EVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITALYHPLALRFFLMRTHYRSDVNHSDQAL 180
Query: 326 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 385
+ ASD V+YI+QTL DCE L+ ++E G + + ++ I+K EF MS+DL T+
Sbjct: 181 EIASDRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTD 240
Query: 386 ILTGAFQDALKFINSSLNMLKKKQPKQQQLS----------------------LIESLRK 423
+L F + LK INSSLN LKK Q K +Q I++L
Sbjct: 241 VLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIA 300
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+E E+K L ILGL+P + +EVL+QLKDKALKRA LTEE + + IE+R ARKNK F
Sbjct: 301 LEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEI 360
Query: 484 SDQIRADLTRKGIALMDMGKETIWRPC 510
SD IR +L KGIALMD T+WRPC
Sbjct: 361 SDGIRKNLATKGIALMDEPSGTVWRPC 387
>gi|167629446|ref|YP_001679945.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|229558718|sp|B0TC35.1|SYC_HELMI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167592186|gb|ABZ83934.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 481
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/499 (43%), Positives = 307/499 (61%), Gaps = 27/499 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN+++++KE F P G+VGMYVCG T YD HLG+AR V FD + RYLEH+
Sbjct: 1 MSLRVYNTLSREKETFVPHKAGRVGMYVCGPTTYDYIHLGNARPLVVFDTIRRYLEHVGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV Y++NFTD+DDKII RA ++GE+P++++ R+ +EY D L P T P+VS HM
Sbjct: 61 EVVYIQNFTDIDDKIIHRAKEIGEDPIAMAARFVEEYYRDAKALNVRPATIHPKVSAHMA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I MI ++ AY + GDV+F++ +YG+LSG+ LE+ +AG RV V+ RKR+P D
Sbjct: 121 EIIAMIGVLVEKGHAYELGGDVYFSIPSFKDYGKLSGRSLEDLQAGARVDVNERKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSRKYLGDAFDIHGGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS A S ++ YW+HNG +T N EKMSKSLGNFFT+R+I +R+ +R +L+S HYR
Sbjct: 241 QSEACTGTSPMARYWLHNGFITVNQEKMSKSLGNFFTLREILKRFPGDVIRFYLLSTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-----EDCINKLR 370
SP+++ +L++A + + + + E AL+ GK PA E+ +
Sbjct: 301 SPIDFDDSKLEAAQKGLQRLRTSRRLIEEALAA---SGKEGAERPAGQREKLEEQWLAAK 357
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
F M DD NT+ L+ F D + N+ L+ P+ +QL L ++ +E
Sbjct: 358 KGFREAMDDDFNTALALSMLF-DLAREANTFLHGGFALTPEDRQLLL-----QVAETFEE 411
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRA 489
+ +LG+ L A + T + ++ LI RA ARK KD++ +D+IR
Sbjct: 412 LAGVLGI-----------DLAGGAAAADDNTVDGLMNLLIGIRAEARKKKDWATADRIRD 460
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI + D + W+
Sbjct: 461 GLKELGIVIEDTPQGARWK 479
>gi|336311084|ref|ZP_08566052.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
gi|335865499|gb|EGM70522.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
Length = 459
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 294/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+E+I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIEEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVERLLERGHAYVAADGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ T +PA E +F A M
Sbjct: 302 LNYSEENLKQARAALERLYTAIKDVDL----------TVAADPAEE-----FVAKFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + + + I + +K++ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN------------RLKTTDIAKASALAVAMKQLADVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L A + E ++++V + LI ER AR KD++ +D R L
Sbjct: 394 LSQDP----------SAFFKGEGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNEL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 444 GVVLEDGPSGTTWR 457
>gi|344344279|ref|ZP_08775143.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343804236|gb|EGV22138.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 462
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/491 (44%), Positives = 296/491 (60%), Gaps = 33/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T+QK F P+ PGKV MYVCG+T YD HLGHAR V FD++YRYL L EV
Sbjct: 2 LQIHNSLTRQKTPFQPLEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE+ +L+ R+ D A L L PT +PR + H+++I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGESCAALTERFIAAMHEDAAALGVLAPTSEPRATAHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ M+ +I+ AY + GDV++AV + P YG+LSG+ ++ RAG RV VD KR+P DF
Sbjct: 122 QTMVATLIDKGLAYAADNGDVYYAVSRFPGYGKLSGKDPQDLRAGARVEVDEAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK GEPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKGAKPGEPSWSSPWGEGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + WMHNG V N EKMSKSLGNFFT+R++ ER+ +R+F++++HYRSP
Sbjct: 242 SEGATGEPFAEVWMHNGFVRINEEKMSKSLGNFFTVREVLERFRAEEIRYFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ QL SA A+ +Y L+ A +P + T F A M
Sbjct: 302 LNYADEQLQSARGALTRLYTALRGLPEAEAPAESAFAT----------------RFTAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + +N + +Q +L LR++ ++G+
Sbjct: 346 DDDFNTPEALAVLFE-----LAREVNRARDAGEPEQAAALGAELRRLGG-------VIGI 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + L+ L + + +I +R AAR +D++++D++R LT GI
Sbjct: 394 LQ----DDPERYLRGGDGGTDGLDDAAIESMIAQRQAARAARDWAEADRLRDALTEAGIV 449
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 450 LEDGAQGTTWR 460
>gi|337288279|ref|YP_004627751.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium sp. OPB45]
gi|334902017|gb|AEH22823.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium geofontis OPF15]
Length = 490
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 305/493 (61%), Gaps = 14/493 (2%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
TL+IYNS+T++ E F P+ P KV MYVCG+TAYD SHLGHAR+AV FD+ YR L++L E
Sbjct: 6 TLRIYNSLTKKIEDFIPLNPPKVTMYVCGITAYDSSHLGHARSAVIFDVFYRLLKYLGYE 65
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRN TD+DDKII R+N G L+ +Y +EY L L PTY+PR S+H+ +
Sbjct: 66 VIYVRNITDIDDKIINRSNKEGIPWKELTQKYIEEYEKVTQALGLLKPTYEPRASEHIPE 125
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I ++I AY GDV+F V K P+YG+LSG+++E AG R+ V +K+NP DF
Sbjct: 126 IISLIEKLIEKGLAYQSNGDVYFEVTKFPSYGKLSGRKIEELIAGVRIEVSEKKKNPLDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP W+SPWG GRPGWHIECSAM+ YL DIHGGG+DLIFPHHENEIAQ
Sbjct: 186 ALWKSAKPGEPFWESPWGKGRPGWHIECSAMALKYLGETIDIHGGGLDLIFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + Y++H+G +T EKMSKSLGN+ T+ + + +HP ++ FL+S HYRSP
Sbjct: 246 SEGATEKQFARYFIHHGLITVKGEKMSKSLGNYVTMEYLLKTFHPEVIKAFLLSTHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+Y + + A++ Y+TL + A P +E G + E + + F + +
Sbjct: 306 LDYREENIKNMEKAIYRFYETLYWLKKA-QPLKE-GLLSEKARKLEKGLKDFENNFISAL 363
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL-RILG 436
DD NT+ L F F N N + K + L+ L KIE +++++ +ILG
Sbjct: 364 LDDFNTALALGHLFS----FENEIYNFITKTPNLTTEEVLL--LEKIEKKIRDLSGKILG 417
Query: 437 L--LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+ P + ++ K K +K+ ED L+++R +ARK K+F +D+IR +L
Sbjct: 418 IGEREPDEFWNTERKRKLKIIKKDLKEIED---LVKKRESARKEKNFILADKIRDELKNL 474
Query: 495 GIALMDMGKETIW 507
GI L D ET W
Sbjct: 475 GIILKDTRTETFW 487
>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|187631632|sp|A1S4X2.1|SYC_SHEAM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 459
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/491 (46%), Positives = 290/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+++QKE F PI PGK+GMYVCGVT YDL H+GH R V FD++ RYL + EV
Sbjct: 2 LKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y RN TDVDDKII+RAN+ GE+ SL+ R E D L + P+++PR + H+++I
Sbjct: 62 NYQRNITDVDDKIIKRANENGESCDSLTERLIGEMHADFDALNMVRPSFEPRATLHIDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+T++++ AYV +GDV F V YGRLSGQ LE +AG RV VD KRNP DF
Sbjct: 122 IDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDENKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLAHYDAQTVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ ++ + A++ +++ F A M
Sbjct: 302 LNYSEDNLKQARASLERMYTALKGLDLTVEA-----------AGADEFVSR----FMAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K ++ L E+ EVL IL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN---------RLKTSDMAAASQLGVALKELAEVLGILSS 396
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P E Q + A + AE+ LI ER AR KD+ +D R L G+
Sbjct: 397 TP-----EAFLQGEGNADEVAEIE-----ALIVERNRARAEKDWPAADVARDRLNALGVV 446
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 447 LEDGPEGTTWR 457
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/492 (43%), Positives = 305/492 (61%), Gaps = 31/492 (6%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLAPDEAPRATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++++N AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE-FHAR 376
+N+S + L A A+ Y A +Q+ + N D +++ E F+A
Sbjct: 306 VNFSDVALKEAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ + F+ A LN K++ +Q +LR + N ILG
Sbjct: 354 MCDDFNTAEAMAVLFELA-----KELNRALKEENAEQAKVFYSTLRHLTN-------ILG 401
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L+ + + +AL L+E ++ +LI++R A+K KDF+K+D IR +L +G+
Sbjct: 402 LVQHNVDDFLRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGV 458
Query: 497 ALMDMGKETIWR 508
L D + T+WR
Sbjct: 459 VLEDTRQGTLWR 470
>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 486
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/496 (42%), Positives = 304/496 (61%), Gaps = 35/496 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++YN+++ KE F P+VPGKV MYVCGVT YD H+GHAR+A+ FD+L RYLE+ V
Sbjct: 2 LRLYNTLSGSKEPFEPLVPGKVRMYVCGVTVYDYCHIGHARSALVFDVLRRYLEYSGFVV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ +NFTDVDDKII+RA + G + ++ Y Y DM L T +PR ++H+ +I
Sbjct: 62 EFAKNFTDVDDKIIKRAKEQGVSCEHVTTTYINAYYEDMEKLGVRRATLEPRATEHIAEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ ++ AY V+GDV+F V++ YGRLS + +++ +AG RV VD RKR+P DFA
Sbjct: 122 VRLVDTLLAKGMAYRVDGDVYFQVDRYAVYGRLSKRNVDDLQAGARVDVDERKRHPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEPSWDSPWG GRPGWHIECSAM+ +L FDIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKGSKPGEPSWDSPWGQGRPGWHIECSAMAMRHLGETFDIHGGGMDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH------PLALRHFLISA 312
C A YW+HNG V N EKMSKSLGNFFTIR+I ++ LR+FL++
Sbjct: 242 CGATGKEFARYWVHNGFVQINQEKMSKSLGNFFTIREIFQKSEWPDTVTGEMLRYFLLTT 301
Query: 313 HYRSPLNYSVLQLDSASDAV--FY-IYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL 369
HYRSPL++S L A +A+ FY +++ L + SP + + ++ + +
Sbjct: 302 HYRSPLDFSDQSLKEAKNALNGFYDLFERLNESAPVHSPGDQ---------SMQEAMVRT 352
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK-IENEV 428
R+ F A M DDLNT + L ++L ML+ K + L +R+ + E
Sbjct: 353 REAFVAAMDDDLNTPNAL------------AALQMLRGDTNKALEAGLSGEMRQMVRQEF 400
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKA----LKRAELTEEDVLQLIEERAAARKNKDFSKS 484
+ + +LGLL + +QQ + + L++ED+ + R AA+++K++ +
Sbjct: 401 RALGIVLGLLQTDTWRFKIQQQQPSSGGAEASTGTLSDEDIADKLAARLAAKRSKNYQLA 460
Query: 485 DQIRADLTRKGIALMD 500
DQ+RA+L GI + D
Sbjct: 461 DQLRAELASHGITIED 476
>gi|421465010|ref|ZP_15913698.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204272|gb|EJO35256.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 473
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/492 (43%), Positives = 305/492 (61%), Gaps = 31/492 (6%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++++N AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE-FHAR 376
+N+S + L A A+ Y A +Q+ + N D +++ E F+A
Sbjct: 306 VNFSDVALKEAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ + F+ A LN K++ +Q +LR + N ILG
Sbjct: 354 MCDDFNTAEAMAVLFELA-----KELNRALKEENAEQAKVFYSTLRHLTN-------ILG 401
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L+ + + +AL L+E ++ +LI++R A+K KDF+K+D IR +L +G+
Sbjct: 402 LVQHNVDDFLRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGV 458
Query: 497 ALMDMGKETIWR 508
L D + T+WR
Sbjct: 459 VLEDTRQGTLWR 470
>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 483
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 294/495 (59%), Gaps = 18/495 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN+ +++KE F P+ PG V +YVCGVT YD H+GHAR V+FD + R+
Sbjct: 1 MPLVVYNTQSRRKEEFIPLEPGVVRVYVCGVTVYDDPHIGHARCYVAFDAMVRHFLAKGW 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YVRNFTD+DDKIIRRA + G L+++Y + + DMA L LPP+++PR ++H+
Sbjct: 61 RVNYVRNFTDIDDKIIRRAAESGLGWRELADKYIESFRQDMAALDVLPPSHEPRATEHIA 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
++ I ++ AY +EG DV FAVE YG+LS + LE+ +AG RV VD RK+NP
Sbjct: 121 EMIATIQTLMAKGHAYQIEGGDVLFAVESFDGYGKLSRRNLEDMQAGARVEVDPRKKNPM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+K GEPSWDSP GPGRPGWHIEC+AMS YL FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKASKPGEPSWDSPLGPGRPGWHIECTAMSGKYLGQTFDIHGGGEDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQ A YW+HNG V N+EKMSKSLGNFFTI+ I + P ALR FL+S HYR
Sbjct: 241 AQGEACTGHPLAHYWLHNGFVRVNHEKMSKSLGNFFTIKDILKITRPEALRLFLLSKHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEF 373
SPL++S + A + +Y LQ + A P G+ AAE I L DEF
Sbjct: 301 SPLDFSDAAIKEAGAGLERLYTALQAAQERAAAGPLDAAGQAL----AAE--IQALADEF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M DD NT+ + F + N L + + L+E + E+ L
Sbjct: 355 EAGMDDDFNTARAIGALFG-----LARLGNKLAAEPDGPAKGPLLELCARRLRELGGRLG 409
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+L + P +E + + + + D+ LI +R ARK+K+F+++D+IR L
Sbjct: 410 LLRIDP----AEFFRGAAGQTATQGGVGAADIEALIAQRNQARKDKNFAEADRIRDQLKA 465
Query: 494 KGIALMDMGKETIWR 508
G+ L D + T WR
Sbjct: 466 MGVTLQDSPQGTTWR 480
>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 468
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/495 (44%), Positives = 297/495 (60%), Gaps = 34/495 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++YN +T +KE F P+ GKV YVCG T YD H+G+AR + FD++ RYLEHL
Sbjct: 1 MAFEVYNDLTNRKEPFVPLEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEHLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTD+DDK+I+RA ++G L++R+ + Y D L T P+ ++ +
Sbjct: 61 QVTYVQNFTDIDDKMIKRAQEMGITVKELADRFIEAYYQDADALGIRRATVNPKATEEIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++I +I AY ++GDV+F V P YG+L Q LE ++G RV VD RKR+P D
Sbjct: 121 HIIELIELLIQKGHAYQIDGDVYFDVMSYPPYGKLIKQDLEELQSGARVEVDPRKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+WDSPWGPGRPGWHIECSAM H+L D HGGG DL+FPHHENEIA
Sbjct: 181 FALWKAQKPGEPAWDSPWGPGRPGWHIECSAMCRHHLGDTIDFHGGGCDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG++ + EKMSKSLGNF T R + +R+ PL +R F++SAHYRS
Sbjct: 241 QSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDLMKRFPPLVIRLFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS---PFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L A A+ + AL P + R + I + RD+F
Sbjct: 301 PINFSEENLRQAQAALERLRNGWAQIRFALDNPPPSTSESRELR------EQIARYRDDF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
H M DDLNT+ L GA ++ NS L+ + P + +L + N +++V R
Sbjct: 355 HRAMDDDLNTAEAL-GAVFSLIRATNSHLS--RGDSPD------LAALEEASNFLRDVDR 405
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
I+G++ + + L R DV LIEER AARK +DF+K+D IR L+
Sbjct: 406 IMGVI----------GIDEDQLDR------DVEALIEERNAARKARDFAKADAIRDRLSS 449
Query: 494 KGIALMDMGKETIWR 508
GI L D + T W+
Sbjct: 450 MGIVLEDTPQGTRWK 464
>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122314719|sp|Q0AJJ4.1|SYC_NITEC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 467
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/493 (45%), Positives = 301/493 (61%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIY+++T+ + F P+ PGKV MYVCG+T YD HLGHAR V FD + R+L+ L EV
Sbjct: 2 LKIYDTLTRSRREFIPLTPGKVKMYVCGMTVYDHCHLGHARVLVVFDSVVRWLQTLDYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + E +L+ RY Q D A L + P+++PR ++ +E +
Sbjct: 62 TYVRNITDIDDKIIRRALENHEPFGALTARYIQAMEEDAAALGIISPSFEPRATECIESM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AYV GDVF+ V + P YG+LSG+ L++ RAGERV +D+ KR+P DF
Sbjct: 122 VTMIESLLSKGLAYVANNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSWDSPWG GRPGWHIECSAMS HYL +FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSGHYLGERFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +V+YWMHNG V +NEKMSKSLGNFFT+R++ RY P +R F++ AHYRSP
Sbjct: 242 SEGVHGHPHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLARYQPEVVRFFIVRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK-LRDEFHAR 376
LNYS L+ A +A+ +Y L++ + + + A A D +N F A
Sbjct: 302 LNYSDAHLNDARNALERLYTALKNHAPSQA------QAAEEATATIDWVNDGYAQRFMAA 355
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT + F A + + SL+++L ILG
Sbjct: 356 MNDDFNTPEAVAVLFDLASE---------ANRTGNSHYASLLKALGG----------ILG 396
Query: 437 LLPPGAYSEVLQQLKDKALKRAE-LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LL Q L+ A + + + E++ ++I++R ARK K+F+++D +R L G
Sbjct: 397 LLQ----QSPRQYLQHPAHPQNDHHSIEEIERMIQQRLQARKEKNFAQADALRQQLAEAG 452
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 453 IILEDGPQGTTWR 465
>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
gi|187629846|sp|A0L4P8.1|SYC_MAGSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
Length = 490
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/500 (43%), Positives = 299/500 (59%), Gaps = 29/500 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + IYN++ ++KE F P++PGKVGMYVCGVT YD SH+GHAR V FD++ R+L
Sbjct: 8 VGITIYNTLGRKKEPFVPMIPGKVGMYVCGVTVYDYSHIGHARVMVVFDVIARHLRVTGF 67
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
++TYVRNFTD+DDKII+RAN+ GE+ +L+ RY + DMA L P +P+ ++H+
Sbjct: 68 DLTYVRNFTDIDDKIIKRANERGESIQTLTQRYIDAFHQDMAALGVQPADIEPKATEHLP 127
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ MI +++ AY GDV++AVE+ NYG+LSG+ L+ AG RV VDS K+NP D
Sbjct: 128 EMMQMIGTLMDKGVAYASGGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDSNKQNPMD 187
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK EP WDSPWG GRPGWHIECSAM YL + FDIHGGG DLIFPHHENEIA
Sbjct: 188 FVLWKGAKPEEPQWDSPWGAGRPGWHIECSAMGTKYLGASFDIHGGGRDLIFPHHENEIA 247
Query: 257 QSCAACQDSNVSYWMHNGHVTNNN-----EKMSKSLGNFFTIRQITERYHPLALRHFLIS 311
Q+ V+YW+HNG V N EKMSKSLGNF TIR + Y LR F+++
Sbjct: 248 QTEGCTGQHAVNYWIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLALYPGEVLRFFILN 307
Query: 312 AHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS--PFQEHGKTARINPAAEDCINKL 369
+HYRSPL++S L++A + IY L+ + L P G+ A + A L
Sbjct: 308 SHYRSPLDFSFSLLEAAKAGLDRIYTALRSAQALLGKLPGTPIGEPADVPAGAP---QDL 364
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
+ + M DD NT A+ F+ + ML +Q+ ++I + ++ +
Sbjct: 365 VENYLKAMDDDFNTPQ--------AIAFLFEAAKMLNTAISEQKDPAVIATWARLIRGLG 416
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAE--LTEEDVLQLIEERAAARKNKDFSKSDQI 487
L + G P +L ++ AE L E + LI ER+AAR K++++SD+I
Sbjct: 417 HHLGLAGQDP---------ELWFRSGIGAEQGLQAEAIEALIAERSAARAAKNWAESDRI 467
Query: 488 RADLTRKGIALMDMGKETIW 507
R L ++GI L D T W
Sbjct: 468 RDTLAQQGIVLEDGQHGTQW 487
>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 474
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/490 (43%), Positives = 297/490 (60%), Gaps = 20/490 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+QKE F P+ G+V MYVCG T YD +HLGHAR ++FD++ RYLEH V
Sbjct: 1 MKVYNTLTKQKEEFKPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYTV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKIIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+E I
Sbjct: 61 LMVMNFTDIDDKIIRRAQETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D + ++ AY V+F V++ +YG+LSG +LE R G RV KRNP DFA
Sbjct: 121 IDFVKKLEEKGYAYEGSDGVYFEVQRFRDYGKLSGIKLEELRKGARVEPGEGKRNPEDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP WDSPWG GRPGWHIECS MS YL +FDIHGGG DLIFPHHENEIAQ+
Sbjct: 181 LWKKAKPGEPKWDSPWGEGRPGWHIECSTMSTKYLGEQFDIHGGGNDLIFPHHENEIAQT 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+H G V EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL
Sbjct: 241 EACTGKEWVRYWLHTGFVMVKGEKMSKSLGNFVTIRELLQRYSPEVIRFFVLQKHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+Y+ + A + + +Y T+++ +AL + K ++ + I + + +F+ M
Sbjct: 301 DYTEEGIQHAKNNLEKLYNTIENIRIALEKAEIPFKWSKEEFELYEVIREAKRKFYEAMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ + F+ A +N L ++K PK+ LRK K V + G+
Sbjct: 361 DDFNTAEAMKPIFEVA-NAVNKYLAKVEK--PKES------VLRKALEFFKMVGEVFGIF 411
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
Y + ++ K++ L + LI+ RA RK K+++ +D+IRA+L GI L
Sbjct: 412 E--EYFKETKETKEEEL---------IELLIQVRAELRKQKNYALADKIRAELRELGIQL 460
Query: 499 MDMGKETIWR 508
D + TIW+
Sbjct: 461 EDTPQGTIWK 470
>gi|421857183|ref|ZP_16289537.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187405|dbj|GAB75738.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 473
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/492 (43%), Positives = 305/492 (61%), Gaps = 31/492 (6%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L EV Y
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++
Sbjct: 66 VRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++++N AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF
Sbjct: 126 MIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE-FHAR 376
+N+S + L A A+ Y A +Q+ + N D +++ E F+A
Sbjct: 306 VNFSDVALKEAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ + F+ + LN K++ +Q +LR + N ILG
Sbjct: 354 MCDDFNTAEAMAVLFE-----LAKELNRALKEENAEQAKVFYSTLRHLTN-------ILG 401
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L+ + + +AL L+E ++ +LI++R A+K KDF+K+D IR +L +G+
Sbjct: 402 LVQHNVDDFLRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLDQGV 458
Query: 497 ALMDMGKETIWR 508
L D + T+WR
Sbjct: 459 VLEDTRQGTLWR 470
>gi|410464212|ref|ZP_11317669.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409982672|gb|EKO39104.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 485
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 295/490 (60%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+MT+ KE F VPGKV MYVCG+TAYDL H+GHAR++V FD+L RYL H+ +V
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++AN G ++ RY + DM L L P +P+ ++++ ++
Sbjct: 61 TFVRNFTDVDDKIIKKANAEGTTSQEIAERYIATFYEDMDKLGILRPNAEPKATEYIGEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I++ AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DF
Sbjct: 121 ASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP W+SP+GPGRPGWH+ECSAMS L DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA YW+HNG V N EKMSKSLGNF TIR I RY P LR FL+S+ YRSP
Sbjct: 241 SEAAIGGEFCRYWVHNGFVRINTEKMSKSLGNFITIRDIYARYLPEVLRFFLLSSQYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + IY E AL+ + ++ + +++ + F A M
Sbjct: 301 LDYSDQGLDEAEKGIKRIYTAKVQMEQALA--RAKWSETKLPADVTEELSRHEEGFTAAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ + F L + L M K K ++ + E LR+I ++G+
Sbjct: 359 DDDLNTAQAMGHVF--GLVRLAGRL-MEDKTLVKSRETA--EVLRRILANFAVWAEVIGV 413
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
A + L +LK L R + V L+ ER ARK KDF++SD IR +L G+
Sbjct: 414 FGTDA-AAFLAELKACRLTRLGIDATRVDALVAERQDARKAKDFARSDAIRDELAVLGVT 472
Query: 498 LMDMGKETIW 507
+MD W
Sbjct: 473 VMDTPTGPQW 482
>gi|336449929|ref|ZP_08620386.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
gi|336283086|gb|EGN76293.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
Length = 460
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/497 (45%), Positives = 293/497 (58%), Gaps = 47/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+TQ+KE F PI G+V +YVCGVT YDL H+GHAR V+FD++ RYL +L +V
Sbjct: 2 LKLYNSLTQRKEEFKPIQAGEVKLYVCGVTIYDLCHIGHARTYVAFDVIVRYLRYLGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TDVDDKIIRRA + E+ S++ R+ D L + P +PRV+ HM++I
Sbjct: 62 TFVRNVTDVDDKIIRRAAENNESIDSITERFLGYMHDDFRALNLVEPDIEPRVTTHMQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ Q++ AYV GDV F V P YGRLSGQ LE +AG RVAV K++ DF
Sbjct: 122 IDLVAQLVEKKHAYVASSGDVLFDVSSFPEYGRLSGQNLEQLQAGARVAVTEGKQDQMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EPSW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKRAKADEPSWESPWGAGRPGWHIECSAMNGKHLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V N EKMSKSLGNFFTIR + Y +R FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVQVNQEKMSKSLGNFFTIRDVLASYAAETVRFFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS LD A ++ IY ++ IN AE +R+ + AR
Sbjct: 302 LNYSEAHLDQAHASLERIYTAMRG----------------IN--AETASASVRESYEARI 343
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
++DD N ++ F+ I +N + + + SL L
Sbjct: 344 REALNDDFNVPEAMSVIFE-----ITREVN-----RQRSENKSLAAEL------------ 381
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADL 491
+ L GA +LQQ D+ LK +E E + LIE+R +AR+ KD++ +D R +L
Sbjct: 382 VFLLQEYGAILGILQQQPDEFLKGSEDDSEVAKIEALIEQRNSAREAKDWAGADAARDEL 441
Query: 492 TRKGIALMDMGKETIWR 508
GI L D + T+WR
Sbjct: 442 QALGIVLEDTAEGTLWR 458
>gi|389580502|ref|ZP_10170529.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
gi|389402137|gb|EIM64359.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
Length = 480
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/498 (44%), Positives = 307/498 (61%), Gaps = 26/498 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+++ +KE F PI KVGMYVCG T YD SH+GHAR+ V FD++YR+L L
Sbjct: 1 MSLRIYNTLSGKKEEFVPIRANKVGMYVCGPTVYDTSHIGHARSVVVFDMVYRWLMQLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII+++N+ G++ +++ +Y E+ +M L L PT P+ ++H++
Sbjct: 61 EVTYVRNFTDVDDKIIKKSNETGDSCTAITTKYIDEFHNEMDALNVLRPTIAPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I + ++I+ AY VEG DV+F++ YG+LS + ++ +AG R+AVD +KR+P
Sbjct: 121 HIIRFVQRLIDLGKAYHVEGGDVYFSISSFSEYGKLSHRNPDDMQAGARIAVDEKKRSPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEI
Sbjct: 181 DFTLWKPAKPGEPYWDSPWGKGRPGWHIECSAMSYEYLGESFDIHGGGKDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A+ V YW+HNG V NNEKMSKSLGNF I+++ Y P +R FL+S HYR
Sbjct: 241 AQSEASFGVPFVKYWIHNGFVDINNEKMSKSLGNFTMIKEVLADYSPEVIRMFLLSKHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVA-LSP----FQEHGKTARINPAAEDCINKLR 370
SP++YS + S A+ IY L+ + A ++P EHG P D + L
Sbjct: 301 SPIDYSENSMREVSVALDRIYGFLERLDKAGITPPDAAGGEHG------PLWADIVEALN 354
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
D+F N++ + F DA+K N L+ + + + L I +++
Sbjct: 355 DDF--------NSAKAMAEIF-DAVKKGNKLLDDANDAPGESDR----KVLAGIYADIRS 401
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
ILG+ A ++ KD+A+ ++ + LI ERA ARK+K+F+++D+IR
Sbjct: 402 ASEILGIFMICA-ADYFAAKKDRAMADQDVDSAMIDALIVERANARKSKNFARADEIRDQ 460
Query: 491 LTRKGIALMDMGKETIWR 508
L I L D + T WR
Sbjct: 461 LQAMKIVLEDGPQGTTWR 478
>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 465
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/488 (43%), Positives = 296/488 (60%), Gaps = 30/488 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+++Q KE F P+ KV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ +EY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELAKRFIEEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V+ NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVSINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEDLKAKFIEAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L +++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANSCSK-----------ETLTFVKDTLKELCSILGIL 405
Query: 439 PP-GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
GA E + Q ++L+L+E+R ARK K+F+++D+IR +L G
Sbjct: 406 EQYGAKEEAIPQ--------------EILELVEKRNQARKAKNFAEADRIRDELKSLGYI 451
Query: 498 LMDMGKET 505
++D + T
Sbjct: 452 VLDTPQGT 459
>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|166225306|sp|A0KYM2.1|SYC_SHESA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 461
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGKVGMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TD+DDKII+RAN+ E+ +L++R E D L + P ++PR + H+ +I
Sbjct: 64 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF
Sbjct: 124 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ +Y ++D ++ ++ AE+ + K F A M
Sbjct: 304 INYSEENLKQARAALERLYTAIKDVDLTVTA-----------APAEEFVAK----FKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK Q + +K++ +LGL
Sbjct: 349 DDDFNTPEAYSVLFD-----MVREINRLKTTDMAQASAMAV--------AMKQLADVLGL 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L Q D A + E ++++V + LI ER AR KD+ +D R L
Sbjct: 396 ---------LHQAPD-AFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNEL 445
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 446 GVVLEDGPSGTTWR 459
>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 457
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/492 (44%), Positives = 289/492 (58%), Gaps = 40/492 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE+F PI PGK MYVCG+T YD HLGHAR V FD++ R+L ++
Sbjct: 2 LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE +L+ R+ D L + P ++PR ++H+ +
Sbjct: 62 TYVRNITDIDDKIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +I N AY GDV++AV + P YG+LSG+ LE+ RAGERV VD KR+P DF
Sbjct: 122 IALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRDPFDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSW SPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YW+HNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSP
Sbjct: 242 SEGAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS + LD A ++ +Y L++ ++ E AR F
Sbjct: 302 LNYSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEENDYAR--------------RFRQA 347
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F A + + Q L+++L +LG
Sbjct: 348 MDDDFNTVEAMAVLFDLAGEV---------NRGESAAQAGLLKALGA----------VLG 388
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL Q+ AEL+ + + LI+ R AR K++++SD+IR +L KG+
Sbjct: 389 LL-----QRAPQEFLQGGSTAAELSADAIEALIQARRDARTAKNWAESDRIRDELAAKGV 443
Query: 497 ALMDMGKETIWR 508
L D + T WR
Sbjct: 444 ILEDGAQGTTWR 455
>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 463
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 300/493 (60%), Gaps = 35/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++++ K++F PI PG+V +YVCG+T YD H+GHAR V+FD + RYL H +V
Sbjct: 1 MQIYNTLSRSKQVFEPIHPGQVRLYVCGITTYDYCHIGHARVMVAFDAITRYLRHRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA + GE +L+ R+ D L LPP +PR + H++ I
Sbjct: 61 TYVRNITDIDDKILKRAEENGEAYDTLTARFIDAMHEDERALGVLPPDREPRATQHIQDI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I +I+ AY E GDV+F+V +YG+LS ++LE+ G RV ++S KR+P DF
Sbjct: 121 IDLIQVLIDKGAAYTAENGDVYFSVSDFADYGKLSNKKLEDLLEGVRVELESSKRDPRDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK A+ + W++PWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKGAQQDQVGWEAPWGYGRPGWHIECSAMSTSCLGNHFDIHGGGPDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA ++ + WMH G V +NEKMSKSLGNFFTIR++ E+Y P +R+FL+S+HYRSP
Sbjct: 241 SEAATGETYANVWMHAGAVRVDNEKMSKSLGNFFTIREVLEKYQPEVIRYFLLSSHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L+ A + +Y AL P+ + A A D + F M
Sbjct: 301 INYSDNSLEQARAGLERLY-------TALRPYSD---VAADEAALSD--SSALQAFQQVM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L+ F A +Q QQ+ E+ R I ++K + R+LGL
Sbjct: 349 DDDFNTREALSVLFDLA-------------RQLNQQEG---EAARNIAVQLKTLGRVLGL 392
Query: 438 LPPGAYSEVLQQLKDKAL--KRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L A + LK L L+++D+ LI ER A++NKDF+++D IR LT G
Sbjct: 393 LEGDAQA----YLKSGGLVSDAGSLSDDDIDALIAERIEAKQNKDFARADDIRDQLTEAG 448
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 449 IQLEDGPAGTQWR 461
>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878786|sp|Q9UYV2.1|SYC_PYRAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742214|tpe|CCE70848.1| TPA: cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 477
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/495 (42%), Positives = 300/495 (60%), Gaps = 26/495 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +K+YN++T++KE P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MGIKVYNTLTRKKEELKPLRDGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RA + GE+P L+ R+ + +L DM L+ P PRV++H++
Sbjct: 61 TVLMVMNFTDIDDKIIKRAQETGEDPGKLAERFIKVFLEDMNALKVKPADIYPRVTEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++ AY V+F V+K +YG+LSG ++E R G RV K+NP D
Sbjct: 121 DIIEFIKKLKEKGYAYEGSDGVYFEVQKFKDYGKLSGVKIEELRKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRLFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ L A + + +Y TL++ +A+ + K + + A + I + R +F+
Sbjct: 301 PLDYTEEGLQHAKNNLERLYNTLENIRIAMRNAELSYKWSEKDFEAYEAIREARKKFYDA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ +++++N +L+ +PK+ L + E ++
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAINKYILEVDKPKESIL----------RKALEFFKV 405
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTR 493
+ SEV +D + + EE +++ L+E R RK K F +D+IR +L +
Sbjct: 406 V--------SEVFGIFEDYFKEEKKGEEEKLIELLVEVRKQLRKEKRFDLADKIREELRK 457
Query: 494 KGIALMDMGKETIWR 508
GI L D G+ET+W+
Sbjct: 458 LGIQLEDKGQETVWK 472
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/491 (43%), Positives = 299/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P V G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWKVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE+ L++R+ D A L CL P P+ +D+++Q++
Sbjct: 66 VRNITDIDDKIIKRANENGESISELTSRFIDAMNEDFAKLGCLAPDVAPKATDYIDQMQA 125
Query: 141 MITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI +++ AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVDKGTAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVVRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS + L A + + Y + + + + +H E L + F+A M
Sbjct: 306 VNYSDVALKEAKNTLSRFYHSFKTYQAV---YGDH--------LIETLDEALVERFNAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ IN LN K++ +Q +LR + N ILGL
Sbjct: 355 RDDFNTPEAIAVLFE-----INKELNRTVKEENAEQAAIYYATLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L+ E + LI++R A+K K+F+++D+IR L +G+
Sbjct: 403 VQQNVDEFLKSDIGQEALG---LSPEQIEDLIQQRQDAKKAKEFARADEIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735052|sp|B8DKL0.1|SYC_DESVM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 485
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 292/493 (59%), Gaps = 15/493 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P VPGKV MYVCG+TAYDL H+GHAR+AV FD+L RYL H +V
Sbjct: 1 MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RNFTDVDDKII RAN G ++ +Y + DM L L +PR + H+E++
Sbjct: 61 TFARNFTDVDDKIITRANQEGLTSQEVAEKYIATFYEDMDRLNVLRADLEPRATTHIEEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I D AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 ISLCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YW+HNG V N EKMSKSLGNF TIR I E Y P LR+FL++ HYRSP
Sbjct: 241 TEAALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++++ +D A + IY+ L L +E + + + LR F M
Sbjct: 301 IDFTFESMDEAEKNLKRIYEALGLLHAELE--REKWTSGPLPKDVTEEFEGLRQAFADAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD+NT+ L F ++ N L+ K Q K + R + +E +LG+
Sbjct: 359 EDDMNTAAALGHVFT-MVRLANRILD--NKGQRKTEGARAF--FRAVLDEAATWFAVLGV 413
Query: 438 L---PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P G L +L+ + R + V +L++ R AR +KDF+++D IR ++
Sbjct: 414 FGREPAG----FLAELRACRVARKGIDPAKVEELLQARINARADKDFARADAIRDEIAAL 469
Query: 495 GIALMDMGKETIW 507
GI + D +W
Sbjct: 470 GIEVRDTPSGAVW 482
>gi|347540729|ref|YP_004848154.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643907|dbj|BAK77740.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 457
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/492 (44%), Positives = 290/492 (58%), Gaps = 40/492 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE+F PI PGK MYVCG+T YD HLGHAR V FD++ R+L ++
Sbjct: 2 LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE +L+ R+ D L + P ++PR ++H+ +
Sbjct: 62 TYVRNITDIDDKIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +I N AY GDV++AV + P YG+LSG+ LE+ RAGERV VD KR+P DF
Sbjct: 122 IALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRDPFDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSW SPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YW+HNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSP
Sbjct: 242 SEGAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS + LD A ++ +Y L++ ++ E AR F
Sbjct: 302 LNYSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEENDYAR--------------RFRQA 347
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F + +N + Q L+++L +LG
Sbjct: 348 MDDDFNTVEAMAVLFD-----LAGEVN----RGESAAQAGLLKALGA----------VLG 388
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL Q+ AEL+ + + LI+ R AR K++++SD+IR +L KG+
Sbjct: 389 LL-----QRAPQEFLQGGSTAAELSADAIEALIQARRDARAAKNWAESDRIRDELAAKGV 443
Query: 497 ALMDMGKETIWR 508
L D + T WR
Sbjct: 444 ILEDGAQGTTWR 455
>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|166225305|sp|A4Y5H9.1|SYC_SHEPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 461
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 4 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 64 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 124 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ T PA E + +F A M
Sbjct: 304 LNYSEDNLKQARSALERLYTAIKDVDL----------TVAAAPAEEFIV-----KFKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K ++ +L ++ +VL +LG
Sbjct: 349 DDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLLGQ 398
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
P A + E ++++V + LI ER AR KD++ +D R L
Sbjct: 399 DP-------------DAFFKGEGSDDEVAEIEALIVERNRARSEKDWAAADVARNRLDIL 445
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 446 GVVLEDGPSGTTWR 459
>gi|359396712|ref|ZP_09189763.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
gi|357969390|gb|EHJ91838.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
Length = 468
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/499 (44%), Positives = 294/499 (58%), Gaps = 42/499 (8%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
MD + IYN++T++KE FTP+ GKV MYVCG+T YD HLGHAR V+FD++ RYL
Sbjct: 1 MDSHMHIYNTLTRRKEPFTPLEAGKVSMYVCGMTVYDYCHLGHARVMVAFDIITRYLRER 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+V YVRN TD+DDKI++RA++ GE+ +L+ R D A L LPP+++PR + H
Sbjct: 61 GYDVNYVRNITDIDDKILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGH 120
Query: 135 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+E I MI +I AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +
Sbjct: 121 IEDIVAMIETLIEKGFAYAADNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKED 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAK GE W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKPGEAHWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R L+++H
Sbjct: 241 EIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSP+NYSV L A ++ +Y L+ L P + A D + R+ F
Sbjct: 301 YRSPINYSVDSLTEARKSLTRLYTALE----GLEPGE----------ANRDAASAYRERF 346
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT L F+ + +N K+ QP + K+ E+K++
Sbjct: 347 TQVMDDDFNTPEALAVMFE-----LAREVNRAKQDQPVEAA--------KMAGELKQLGS 393
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAE-----LTEEDVLQLIEERAAARKNKDFSKSDQIR 488
ILGL LQQ+ LK + L+E ++ I +R A+ NKDF+++D IR
Sbjct: 394 ILGL---------LQQVPQTFLKGTQQQGMPLSESEIEAKIAQRIEAKTNKDFAQADAIR 444
Query: 489 ADLTRKGIALMDMGKETIW 507
+L GI L D + T W
Sbjct: 445 DELAAMGIILKDSREGTSW 463
>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|166225307|sp|A1RL92.1|SYC_SHESW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
Length = 461
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 292/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 4 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 64 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 123
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 124 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 243
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 244 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ T PA E + +F A M
Sbjct: 304 LNYSEDNLKQARSALERLYTAIKDVDL----------TVAAAPAEEFIV-----KFKAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K ++ +L ++ +VL +LG
Sbjct: 349 DDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLLGQ 398
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
P A + E ++++V + LI ER AR KD+ +D R L
Sbjct: 399 DP-------------DAFFKGEGSDDEVAEIEALIVERNRARSEKDWPAADVARNRLNEL 445
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 446 GVVLEDGPSGTTWR 459
>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 485
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/497 (42%), Positives = 298/497 (59%), Gaps = 27/497 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++ + KE F P+ PGKV MYVCG+TAYD H+GHAR+ V FD+L RYL +L V++
Sbjct: 3 IYNTLHRAKEKFVPLEPGKVRMYVCGITAYDYCHIGHARSCVVFDVLVRYLRYLGYHVSF 62
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII+RA + G + ++ +Y + + +DM +L L +PR + H+E++
Sbjct: 63 VRNFTDVDDKIIKRAEEEGLDSDQVAEKYIEAFYLDMDELNVLKADVEPRATRHIEEMIQ 122
Query: 141 MITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
+ +++ AY+ G D++F V + P YG+LSG+ +E ++G R+A D K +P DFAL
Sbjct: 123 VTKSLLDKGFAYITSGKDIYFRVRRMPRYGQLSGRNIEELQSGSRIAPDEEKEDPLDFAL 182
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WK AK GEPSWDSPWG GRPGWH+EC+AMS YL FDIHGGG DL FPHHENE AQS
Sbjct: 183 WKTAKPGEPSWDSPWGAGRPGWHLECTAMSEKYLGIPFDIHGGGQDLAFPHHENEKAQSE 242
Query: 260 AACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLN 319
AA V YW+HNG V ++EKMSKSLGNF TIR I + +H LR FL++ HYRSPL+
Sbjct: 243 AAFDREFVKYWVHNGFVRVDSEKMSKSLGNFITIRDIMKDFHGEVLRFFLLTKHYRSPLD 302
Query: 320 YSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSD 379
YS L+ A+ +Y + L +E + P A + L ++ M D
Sbjct: 303 YSDGSLEETEKALKRVYWAKTGLQKELQ--KEKWSKGQGFPEASQELQDLASKWDQAMQD 360
Query: 380 DLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP 439
DLNT+ + F + + ML+ K + RK E + + ++LG+L
Sbjct: 361 DLNTAEAVGYVF----GLVRLANRMLEDK-----------TFRKSEAGKEIIQQMLGMLE 405
Query: 440 P-----GAY----SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
G + E L+QLK R ++ + V +++ +R ARK+KDF +D IR +
Sbjct: 406 GWGDALGVFQRSGEEFLEQLKLMRCNRLDIDPQTVQEMVLKRQQARKDKDFETADNIREE 465
Query: 491 LTRKGIALMDMGKETIW 507
LT KGI +MD + W
Sbjct: 466 LTAKGIEVMDTPEGPRW 482
>gi|386826602|ref|ZP_10113709.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
gi|386427486|gb|EIJ41314.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
Length = 464
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/498 (43%), Positives = 297/498 (59%), Gaps = 46/498 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+ K F PI KV MYVCG+T YD H+GHAR V FD++ R+L +V
Sbjct: 2 LTIYNTLTKDKAPFKPIEANKVRMYVCGMTVYDYCHVGHARVMVVFDMVARWLRASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKII RAN+ GE+ SL+ R+ Q D L L P +PR + +++ I
Sbjct: 62 TYIRNITDIDDKIINRANENGEDIYSLTERFIQAMYEDADALGVLRPDQEPRATQYIDHI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+IT+++ AY GDV++AV K YG+LSG+R+E+ RAGERV ++ K++P DF
Sbjct: 122 IDLITRLMKRGYAYTANNGDVYYAVGKFAEYGKLSGKRIEDLRAGERVDIEEAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSW SPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPNEPSWASPWGNGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R + +++ +R+F++++HYRSP
Sbjct: 242 SEGATGEQFVNVWMHNGFVRVNEEKMSKSLGNFFTLRDVLQKFPAEVIRYFILNSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY QLD+A A+ +Y L+ E +P ++ ++ F M
Sbjct: 302 LNYGDQQLDAAQQALTRLYTALRGLEDTGAPLDKN--------------SEFYQRFATAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ-----QQLSLIESLRKIENEVKEVL 432
+DD NT+ + F ++ +N L+ Q QQL L+
Sbjct: 348 NDDFNTAEAIAVLFD-----LSREVNRLRVDNSSQAVAVAQQLKLLGG------------ 390
Query: 433 RILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
ILG+L P A+ K + L+ + V +LI ER AARK K++++SD+IR
Sbjct: 391 -ILGILQADPEAW------FKRENTSTNGLSNDAVEKLIAERQAARKAKNWAESDRIRDM 443
Query: 491 LTRKGIALMDMGKETIWR 508
L +GI L D T WR
Sbjct: 444 LKEQGIILEDAAGVTTWR 461
>gi|406928420|gb|EKD64226.1| hypothetical protein ACD_51C00046G0015 [uncultured bacterium]
Length = 462
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/492 (43%), Positives = 300/492 (60%), Gaps = 32/492 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TLK+ N+++ +KE F PI VGMYVCG T YD HLGH R+AV FD++ +YL++
Sbjct: 1 MTLKVKNTLSGKKEEFKPIKDNHVGMYVCGPTVYDFGHLGHGRSAVVFDIIRKYLKYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV N+TD+DDK+I RAN G L+ + EY D L+ P QP+ + ++
Sbjct: 61 DVTYVSNYTDIDDKMINRANKEGITVKQLAEKIIPEYQEDYGQLKIDKPDTQPKATQYIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
Q+ ++I ++I AY +E V++ VEK +YG+LSGQ + +AG R+ D +KR+P D
Sbjct: 121 QMIELIKKLIEKGYAYELEDGVYYEVEKFAHYGKLSGQNQDELKAGARIEKDDKKRHPHD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK EPSW SPWG GRPGWHIECSAMS L FDIHGGG+DLIFPHHE+EIA
Sbjct: 181 FVLWKKAKPDEPSWPSPWGEGRPGWHIECSAMSMDLLGETFDIHGGGMDLIFPHHEDEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA S V YW+HNG +T NNEKMSKSLGNFFT+++I +Y+P +R+ +I HYRS
Sbjct: 241 QSEAATGKSYVKYWLHNGFITINNEKMSKSLGNFFTLKEIFAKYNPNTVRYMIIGTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S LD + +A+ ++D + L ++ +T++ +PA + + +F R
Sbjct: 301 PINFSHELLDQSENAL----SRIKDFLINLKNYK--NETSKSSPALKKTLENAIKDFEKR 354
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD +T+ L GA + +K +N + K L+ + KIE +K++ +L
Sbjct: 355 MDDDFDTAGGL-GALYNLIKEVNILM--------KNGDLAETDK-EKIETTLKKIDSVLC 404
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+LP S +V I+ R ARKNKDF+ +D+IR DL +GI
Sbjct: 405 ILPEVETS----------------VNPEVENAIKARTDARKNKDFALADKIRKDLESQGI 448
Query: 497 ALMDMGKETIWR 508
L D + TIW+
Sbjct: 449 ILEDTPQGTIWK 460
>gi|402779984|ref|YP_006635530.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402540896|gb|AFQ65045.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 471
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/496 (44%), Positives = 299/496 (60%), Gaps = 35/496 (7%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
++++ +K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL
Sbjct: 8 EVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRF 67
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
+VT+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++
Sbjct: 68 RGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTE 127
Query: 134 HMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR
Sbjct: 128 HIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKR 187
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHE
Sbjct: 188 DPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHE 247
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SA
Sbjct: 248 NEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSA 307
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYR PLNYS + A ++ +Y Q + + S ++H + R
Sbjct: 308 HYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRAR 351
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT L F+ + +N L + +L +L+ + N
Sbjct: 352 FCEAMDDDFNTPQALAILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN------ 399
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGLL A L+ D L AEL + + +LI +R+ AR+ + K+D++R +L
Sbjct: 400 -VLGLLEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELA 453
Query: 493 RKGIALMDMGKETIWR 508
+GI L D+G+ T WR
Sbjct: 454 EQGIDLEDVGENTSWR 469
>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 465
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/487 (43%), Positives = 295/487 (60%), Gaps = 28/487 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ QEY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDMLKAAIEDLKAKFIDAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTYANSCSK-----------ETLTFAKDTLKELCSILGIL 405
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
YSE + E +++L+L+++R ARK K+F+++D+IR +L G +
Sbjct: 406 E--QYSE-----------KEEAIPQEILELVKKRNQARKAKNFAEADRIRDELKSLGYIV 452
Query: 499 MDMGKET 505
+D + T
Sbjct: 453 LDTPQGT 459
>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
Length = 480
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/496 (44%), Positives = 299/496 (60%), Gaps = 35/496 (7%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
++++ +K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL
Sbjct: 17 EVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRF 76
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
+VT+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++
Sbjct: 77 RGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTE 136
Query: 134 HMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR
Sbjct: 137 HIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKR 196
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHE
Sbjct: 197 DPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHE 256
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SA
Sbjct: 257 NEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSA 316
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYR PLNYS + A ++ +Y Q + + S ++H + R
Sbjct: 317 HYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRAR 360
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT L F+ + +N L + +L +L+ + N
Sbjct: 361 FCEAMDDDFNTPQALAILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN------ 408
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGLL A L+ D L AEL + + +LI +R+ AR+ + K+D++R +L
Sbjct: 409 -VLGLLEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELA 462
Query: 493 RKGIALMDMGKETIWR 508
+GI L D+G+ T WR
Sbjct: 463 EQGIDLEDVGENTSWR 478
>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|68735029|sp|Q5JD45.1|SYC_PYRKO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 476
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 290/494 (58%), Gaps = 24/494 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +KIYN++T+QKE F P+ G+V MYVCG T YD +H+GHAR ++FD++ RYLEH
Sbjct: 1 MGIKIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVIRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RAN+ GE+P L+ ++ + +L DM L+ P PRV++H++
Sbjct: 61 TVLMVMNFTDIDDKIIKRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++ AY V+F V K +YG+LS +LE+ G RV K+NP D
Sbjct: 121 DIIDFIRKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKVKLEDLVKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A V YWMH G + N EKMSKSLGNF TIR+ ERY P +R F++ HYRS
Sbjct: 241 QTEACTGHEWVRYWMHTGFLMVNGEKMSKSLGNFVTIREALERYDPEVIRLFVLQRHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ L+ A + + +Y TL++ VA+ + K A + I R +F+
Sbjct: 301 PLDYTEEGLEHAKNNLERLYNTLENIRVAMERAEISFKWGEEEFEAYEAIRDGRKKFYDA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F+ + IN L ++K PK+ LRK K V + G
Sbjct: 361 MDDDFNTAEALKAVFEVS-NAINRYLTQVEK--PKES------ILRKAWEFFKMVSEVFG 411
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVL--QLIEERAAARKNKDFSKSDQIRADLTRK 494
+ + + + EE+ L LI+ RA RK + F +D+IR +L
Sbjct: 412 IF-------------EDYFREQKAGEEEALIKLLIDVRAQLRKERKFDLADKIRDELRNL 458
Query: 495 GIALMDMGKETIWR 508
GI L D + T+W+
Sbjct: 459 GIQLEDTPQGTVWK 472
>gi|386313262|ref|YP_006009427.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 459
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ ++ AE+ I K F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAA-----------APAEEFIAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K ++ +L ++ +VL +LG
Sbjct: 347 DDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLLGQ 396
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
P A + E ++++V + LI ER AR KD+ +D R L
Sbjct: 397 DP-------------DAFFKGEGSDDEVAEIEALIVERNRARSEKDWVAADVARNRLDIL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 444 GVVLEDGPSGTTWR 457
>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254765173|sp|B9MMM6.1|SYC_ANATD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 465
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/487 (43%), Positives = 293/487 (60%), Gaps = 28/487 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ QEY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I +L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEELKAKFIDAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTYANSCSK-----------ETLTFAKDTLKELCSILGIL 405
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
+ E E + +L+L+E+R ARK K+F+++D+IR +L G +
Sbjct: 406 EQYSAKE-------------EAIPQQILELVEKRNQARKAKNFAEADRIRDELKSLGYIV 452
Query: 499 MDMGKET 505
+D + T
Sbjct: 453 LDTPQGT 459
>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|378707994|ref|YP_005272888.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|418023622|ref|ZP_12662607.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
gi|187631635|sp|A9KWH4.1|SYC_SHEB9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|353537505|gb|EHC07062.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
Length = 459
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/491 (45%), Positives = 290/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ ++ AE+ I K F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAA-----------APAEEFIAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN L + Q ++L K++ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L S+ + E+ E + LI ER AR KD++ +D R L G+
Sbjct: 394 L-----SQEPEAFFQGGGSDDEVAE--IEALIVERNRARTEKDWAAADVARNRLNELGVE 446
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 447 LEDGPSGTTWR 457
>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511845|sp|C4LG04.1|SYC_TOLAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 463
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/501 (44%), Positives = 295/501 (58%), Gaps = 53/501 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVVRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TDVDDKII+RA + E+ +L+ R + D L+ P +PR + H+ +I
Sbjct: 62 TFVRNITDVDDKIIKRAAENAESCDALTERLIGDMHADFDALKLQRPDIEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ + AYV + GDV F+++ P YGRLSGQ +E +AG RV V+ KRNP DF
Sbjct: 122 ITLVQSLLDQNYAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGARVDVEESKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP WDSPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPMWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRSP
Sbjct: 242 SCCAHHTPYVNTWMHSGMVMVDEEKMSKSLGNFFTIRDVLKVYDAETVRYFLMSGHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCE-----VALS-PFQEHGKTARINPAAEDCINKLRD 371
LNYS L L A ++ +Y L+ E ALS PF E
Sbjct: 302 LNYSDLNLQQARASLERLYTALRGVEDGEEQAALSAPFDE-------------------- 341
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F A M DD NT + F + LN K+ P ++L LR++
Sbjct: 342 RFKAAMDDDFNTPEAYSVLFD-----LARDLNRAKQDSPA-DAVALAACLRRLGG----- 390
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEED----VLQLIEERAAARKNKDFSKSDQI 487
+LGL LQQ ++ L+ E D + LI+ R AR +K+++ +D+
Sbjct: 391 --VLGL---------LQQQPEQFLQSGAAAETDDVAEIELLIKTRNDARASKNWALADEA 439
Query: 488 RADLTRKGIALMDMGKETIWR 508
R LT GI L D + T WR
Sbjct: 440 RNKLTEMGIVLEDGPQGTTWR 460
>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
gi|254781693|sp|B8E5F2.1|SYC_SHEB2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
Length = 459
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 290/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ ++ AE+ + K F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN L + Q ++L K++ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L S+ + E+ E + LI ER AR KD++ +D R L G+
Sbjct: 394 L-----SQEPEAFFQGGGSDDEVAE--IEALIVERNRARTEKDWAAADVARNRLNELGVE 446
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 447 LEDSPSGTTWR 457
>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|259511829|sp|C4XSW5.1|SYC_DESMR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 485
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 293/490 (59%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+MT+ KE F VPGKV MYVCG+TAYDL H+GHAR++V FD+L RYL H+ +V
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++AN G ++ RY + DM L L P +P+ ++++ ++
Sbjct: 61 TFVRNFTDVDDKIIKKANAEGTTSQEIAERYIATFYEDMDKLGILRPNAEPKATEYIGEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I++ AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DF
Sbjct: 121 ASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP W+SP+GPGRPGWH+ECSAMS L DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA YW+HNG V N EKMSKSLGNF TIR I RY P LR FL+S+ YRSP
Sbjct: 241 SEAAIGGEFCRYWVHNGFVRINTEKMSKSLGNFITIRDIYARYLPEVLRFFLLSSQYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + IY E AL + ++ + +++ + F A M
Sbjct: 301 LDYSDQGLDEAEKGIKRIYAAKVQMEQALG--RAKWSETKLPADVTEELSRHEEGFTAAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ + F L + L M K K ++ + E L +I + +LG+
Sbjct: 359 DDDLNTAQAMGHVF--GLVRLAGRL-MEDKTLAKSRETA--EVLGRILADFGVWAEVLGV 413
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
A + L LK L R + V L+ ER ARK KDF++SD IR +L G+
Sbjct: 414 FGTDA-TAFLADLKACRLTRLGIDAARVDGLVAERQDARKAKDFARSDAIRDELASLGVT 472
Query: 498 LMDMGKETIW 507
+MD W
Sbjct: 473 VMDTPTGPQW 482
>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|229558789|sp|B1KLU0.1|SYC_SHEWM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 459
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/491 (44%), Positives = 291/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ PGKVGMYVCG+T YDL H+GH R V+FD++ RYL + +V
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RN TDVDDKII+RA + E+ SL+ R E D L P ++PR + HM +I
Sbjct: 62 NFLRNITDVDDKIIKRAAENKESCDSLTERLIGEMHKDFDSLNMKRPDFEPRATLHMAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF
Sbjct: 122 IEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDSKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAATIRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D ++ + P AAE+ ++K F M
Sbjct: 302 LNYSEDNLKQAKSALARLYTALKDLDLTVEP-----------AAAENFVSK----FKQAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ +N + +++ + + +KE+ +LG+
Sbjct: 347 DDDFNTPEAYSVLF-DMVREVN------------RLKVTDLAQASALAVRLKELAGVLGI 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L S + D AE+ E V LI ER AR KD+ +D R L G+
Sbjct: 394 LEQDVDSFFKGESND-----AEVAE--VEALIAERNRARAEKDWPAADIARDGLNALGVI 446
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 447 LEDGPEGTTWR 457
>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|386340595|ref|YP_006036961.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
gi|187631633|sp|A3D302.1|SYC_SHEB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|334862996|gb|AEH13467.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
Length = 459
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/500 (44%), Positives = 290/500 (58%), Gaps = 54/500 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ ++ AE+ + K F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN L + Q ++L K++ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGL 393
Query: 438 LP---------PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
L G+Y EV + + LI ER AR KD++ +D R
Sbjct: 394 LSQEPEAFFQGGGSYDEVAE----------------IEALIVERNRARTEKDWAAADVAR 437
Query: 489 ADLTRKGIALMDMGKETIWR 508
L G+ L D T WR
Sbjct: 438 NCLNELGVELEDGPSGTTWR 457
>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|373948991|ref|ZP_09608952.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|386325170|ref|YP_006021287.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|187631634|sp|A6WLP8.1|SYC_SHEB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|333819315|gb|AEG11981.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|373885591|gb|EHQ14483.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
Length = 459
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 290/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ +L+ R E D L L P ++PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF
Sbjct: 122 IDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y ++D ++ ++ AE+ + K F A M
Sbjct: 302 LNYSEDNLKQARSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN L + Q ++L K++ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L S+ + E+ E + LI ER AR KD++ +D R L G+
Sbjct: 394 L-----SQEPEAFFQGGGSDDEVAE--IEALIVERNRARTEKDWAAADVARNRLNELGVE 446
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 447 LEDGPSGTTWR 457
>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
Length = 487
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/505 (43%), Positives = 309/505 (61%), Gaps = 33/505 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+K+YN+ T++KE F P PGKV MYVCG T Y+L HLG+AR + FD + RY E+
Sbjct: 1 MTIKLYNTCTRKKEEFIPRQPGKVDMYVCGPTTYNLIHLGNARPLIVFDTVRRYFEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTD+DDKII RA + +P++L+ +Y +EY D A L T PRVS+H++
Sbjct: 61 QVTYVQNFTDIDDKIINRAREENTDPITLAAKYIREYFKDAAALGVREATVHPRVSEHLD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +MI I+ N AY ++GDV+F+VE YG+LSG+ LE+ +AG RV VD+RKR+P D
Sbjct: 121 EIIEMIRGIMKNGYAYQLDGDVYFSVESFKGYGKLSGRSLEDMQAGARVDVDTRKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEP+WDSPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKAAKPGEPAWDSPWGKGRPGWHIECSAMANKYLGMGFDIHGGGFDLIFPHHENEIA 240
Query: 257 QSCA-ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ A A YWMHNG +T N EKMSKSLGNFFT+R+I +Y P +R +++S HYR
Sbjct: 241 QAEAYAGCGPFARYWMHNGFITVNEEKMSKSLGNFFTVREILAKYDPEVVRFYMLSTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------ 369
SPL++ +L+ ++ ++ L + E L + G+ NP E + L
Sbjct: 301 SPLDFDDTKLEMNRKSLSRLHNALDNIESILKT-NKFGEVE--NPELEKALADLLRAREK 357
Query: 370 --RDEFHARMSDDLNTSHILTGAF---QDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
RD F M DD NT+ + F +D+ FI+++ + +L++ ++
Sbjct: 358 AVRD-FEEAMDDDFNTALAIAVLFDLARDSNAFIHAATSAGGD--------ALLQEVKGA 408
Query: 425 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE-RAAARKNKDFSK 483
+V + LG +VL + + + + ++Q+I + R+ AR KD++
Sbjct: 409 LQQVFDTFMKLG--------QVLGLFEKRGTQGDTGLVDRLMQIILDIRSEARARKDWAT 460
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
+D IR L GI + D + W+
Sbjct: 461 ADGIRNKLNELGIIIEDSPQGARWK 485
>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|425075962|ref|ZP_18479065.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086595|ref|ZP_18489688.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|444350682|ref|YP_007386826.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
gi|405593466|gb|EKB66907.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405603319|gb|EKB76440.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|443901512|emb|CCG29286.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 460
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/491 (44%), Positives = 295/491 (60%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL +V
Sbjct: 2 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI
Sbjct: 62 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF
Sbjct: 122 ISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHENEIAQ
Sbjct: 182 VLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A V+YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SAHYR P
Sbjct: 242 STSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSAHYRKP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS + A ++ +Y Q + + S ++H + R F M
Sbjct: 302 LNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRARFCEAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + +N L + +L +L+ + N +LGL
Sbjct: 346 DDDFNTPQALAILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN-------VLGL 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L A L+ D L AEL + + +LI +R+ AR+ + K+D++R +L +GI
Sbjct: 393 LEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELAEQGID 447
Query: 498 LMDMGKETIWR 508
L D+G+ T WR
Sbjct: 448 LEDVGENTSWR 458
>gi|448747541|ref|ZP_21729198.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
gi|445564821|gb|ELY20936.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
Length = 468
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 292/494 (59%), Gaps = 32/494 (6%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
MD + IYN++T++KE FTP+ GKV MYVCG+T YD HLGHAR V+FD++ RYL
Sbjct: 1 MDSHMHIYNTLTRRKEPFTPLEAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRER 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+V YVRN TD+DDKI++RA++ GE+ +L+ R D A L LPP+++PR + H
Sbjct: 61 GYDVNYVRNITDIDDKILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGH 120
Query: 135 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
++ I MI +I AY + GDV++ V K +YG+L+ ++L++ RAG RV VD K +
Sbjct: 121 IDDIVAMIETLIEKGFAYAADNGDVYYRVRKFADYGKLNNRQLDDMRAGSRVDVDVHKED 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAK GE W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKPGEAHWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R L+++H
Sbjct: 241 EIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSP+NYSV L A ++ +Y L+ E + A D + R+ F
Sbjct: 301 YRSPINYSVDSLTEARKSLTRLYTALEGLE--------------LGAANSDDASAYRERF 346
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT L F+ + +N K++QP + K+ E+K++
Sbjct: 347 TQVMDDDFNTPEALAVMFE-----LAREVNRAKQEQPNEAA--------KLAGELKQLGS 393
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGLL E LK + L+E ++ I +R A+ NKDF+++D IR +L
Sbjct: 394 VLGLLQ----QEPQTFLKGTQQQGMPLSESEIEAKIAQRIEAKANKDFAQADAIRDELAA 449
Query: 494 KGIALMDMGKETIW 507
GI L D + T W
Sbjct: 450 LGIILKDSREGTSW 463
>gi|387129742|ref|YP_006292632.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386271031|gb|AFJ01945.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 464
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/498 (43%), Positives = 301/498 (60%), Gaps = 45/498 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+++++KE+F P+ GKV MYVCG+T YDL H+GHAR V FD++ RYL +V
Sbjct: 2 LKIHNTLSKEKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE +L+ RY E D L L P Y+P+ ++ M +I
Sbjct: 62 TYVRNITDIDDKIIKRATENGETIEALTERYIAEMHRDADALGVLKPDYEPKATESMGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I+ AY + GDV++ V + P+YG+LSG+ + RAGERVAV+ K +P DF
Sbjct: 122 LEMVQTLIDKGLAYTADNGDVYYDVSEFPSYGKLSGRDVNELRAGERVAVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMSA+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGLGRPGWHIECSAMSANCLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A +V+YWMHNG V ++EKMSKSLGNFFT+R++ E Y A+R+F++S+HYRSP
Sbjct: 242 SEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLELYPAEAVRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
LNY+ QL+ A A+ Y +L++ EV +E G F
Sbjct: 302 LNYAEDQLEQAKAALTRFYTSLREVQPQEEVRWQEDKEFGP-----------------RF 344
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ L+ + + +LN ++ +Q + L
Sbjct: 345 KEAMDDDFNTALALS-----VMADVRQALNKAFERGQGIEQAAYYAGL------------ 387
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRAD 490
LL G + QQ D L ++++ + L+ ER AR +K+++++D+IR
Sbjct: 388 ---LLSFGDVLGLFQQNADAFLVGDTGSDDEAAEIDALVAERNQARADKNWARADEIRDQ 444
Query: 491 LTRKGIALMDMGKETIWR 508
LT GI L D +T WR
Sbjct: 445 LTEMGIVLEDAAGKTSWR 462
>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
gi|30316159|sp|Q8EG22.1|SYC_SHEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24347617|gb|AAN54844.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
Length = 459
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/496 (45%), Positives = 295/496 (59%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QK+ F PI PGKVGMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKIYNSITRQKQEFKPINPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TD+DDKII+RAN+ E+ +L++R E D L P ++PR + H+ +I
Sbjct: 62 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMKRPDFEPRATLHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF
Sbjct: 122 IDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDREKMSKSLGNFFTIRDVLSHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+NYS L A A+ +Y ++D + VA +P AE+ + K F A
Sbjct: 302 INYSEENLKQARAALERLYTAIKDVDLTVAAAP-------------AEEFVAK----FKA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F D ++ IN + +L+ + + +K++ +L
Sbjct: 345 AMDDDFNTPEAYSVLF-DMVREIN------------RLKLTDMAEASALAVSMKQLADVL 391
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
GL L Q D A + E ++++V + LI ER AR KD+ +D R L
Sbjct: 392 GL---------LHQSPD-AFFKGEGSDDEVAEIEALIVERNRARTEKDWPAADVARNRLN 441
Query: 493 RKGIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 442 ELGVVLEDGPSGTTWR 457
>gi|357419735|ref|YP_004932727.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397201|gb|AER66630.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 476
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 299/491 (60%), Gaps = 21/491 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
T+ IYN +T+ KE GKVG+Y CG T YD H+G+AR + FD R+LE E
Sbjct: 3 TITIYNDLTRTKEPLVTQKKGKVGIYTCGPTVYDYFHIGNARPFIVFDAFRRFLEAQGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VT+V+NFTD+DDK+I RA +LG L+ ++ + Y D L PT PR ++H+++
Sbjct: 63 VTFVQNFTDIDDKMINRAKELGITVPQLAEKFIEAYYEDADALGIKRPTVAPRATEHIDE 122
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I +I+ N AYVV GDV+F V+ P YG+LS Q LE ++G RV ++ K++P DF
Sbjct: 123 IISLIEKIMKNGHAYVVNGDVYFDVQSYPEYGKLSKQTLEELQSGARVEINPNKKHPLDF 182
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA K GEPSW SPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQ
Sbjct: 183 ALWKAKKPGEPSWPSPWGEGRPGWHIECSAMAIKYLGETIDIHTGGSDLVFPHHENEIAQ 242
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YWMHNG++ N EKMSKSLGNF T R+ +++HP+A+R F++SAHYR+P
Sbjct: 243 AEAATGKPFVKYWMHNGYLMINAEKMSKSLGNFLTAREARKKFHPVAIRLFMLSAHYRTP 302
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LN+SV L +++ + +++C L +E + + + IN L+++F + +
Sbjct: 303 LNFSVENLINSAKGA----ERIRNCWNELLNAEERCYDSGTSMGETETINSLKEKFDSNL 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + G +A+K +N L + + I+S + + E+L I+
Sbjct: 359 KDDFNTAGAI-GVLFEAVKIVNQVL------KGNNFDKNFIDSAKALMRYADEILGII-- 409
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
++ LK + + EL EE + +LI ER ARK ++F+K+D+IR L+ GI
Sbjct: 410 -------DINNTLKAEN-ESTELNEELINELIREREEARKQRNFAKADEIRDKLSSMGIV 461
Query: 498 LMDMGKETIWR 508
L D T W+
Sbjct: 462 LEDTPSGTRWK 472
>gi|352101164|ref|ZP_08958587.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
gi|350600648|gb|EHA16709.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
Length = 468
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 295/496 (59%), Gaps = 36/496 (7%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
MD + IYN++T++KE FTP+V GKV MYVCG+T YD HLGHAR V+FD++ RYL
Sbjct: 1 MDSHMHIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRER 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+V YVRN TD+DDKI++RA++ GE+ +L+ R D A L LPPT++PR + H
Sbjct: 61 GYDVNYVRNITDIDDKILKRADENGESITALTERMIAAMHEDEARLFVLPPTHEPRATGH 120
Query: 135 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
++ I MI +I AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +
Sbjct: 121 IDDIVAMIETLIAKGFAYAADNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKED 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAK GE W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKPGEAHWSSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R L+++H
Sbjct: 241 EIAQSEAATGKTYVNTWMHAGAVRVNKEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSP+NYSV L A ++ +Y L+ + + A + R+ F
Sbjct: 301 YRSPINYSVDSLTEARKSLTRLYTALEGVDT--------------DAIASSEASPYRERF 346
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT L F+ + +N K++QP + ++ E+K++
Sbjct: 347 TQVMDDDFNTPEALAVMFE-----LAREVNRAKQEQPDEAA--------RLGGELKQLGA 393
Query: 434 ILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
ILGLL P + + QQ + L+E ++ I +R A+ NKDF+++D IR +L
Sbjct: 394 ILGLLQQAPQIFLKGTQQ------QGMPLSESEIEAKIAQRIEAKANKDFAQADAIRDEL 447
Query: 492 TRKGIALMDMGKETIW 507
+ GI L D + T W
Sbjct: 448 SALGIILKDSREGTSW 463
>gi|409095424|ref|ZP_11215448.1| cysteinyl-tRNA ligase [Thermococcus zilligii AN1]
Length = 476
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/493 (42%), Positives = 294/493 (59%), Gaps = 22/493 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +KIYN+ T+QKE F P+ G+V MYVCG T YD +H+GHAR ++FD++ RYLEH
Sbjct: 1 MAIKIYNTQTRQKEEFRPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVVRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RAN+ GE+P L+ ++ + +L DMA L+ P PRV++H+
Sbjct: 61 TVLMVMNFTDIDDKIIKRANETGEDPKELAEKFLRYFLEDMAALKVKPADIYPRVTEHVA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++ AY V+F V + +YG+LSG ++E+ G RV K+NP D
Sbjct: 121 DIIEFIRKLQEKGYAYEGSDGVYFEVRRFKDYGKLSGIKVEDLVKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK GEP W SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKKAKPGEPKWSSPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A V YWMH G + N EKMSKSLGNF TIR+ +RY P +R F++ HYRS
Sbjct: 241 QTEACTGHEWVRYWMHTGFLMVNGEKMSKSLGNFITIREALKRYDPEVIRLFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ ++ A + + +Y TL++ VA+ + + + A + I + R +F+
Sbjct: 301 PLDYTEEGMEHAKNNLEKLYNTLENIRVAMERAEISFRWEKHEFEAYEAIREARKKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F+ A +N L + + PK+ L + E +++G
Sbjct: 361 MDDDFNTAEALKAVFE-ASNAVNRYLTQV--ETPKESIL----------RKAWEFFKVVG 407
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKG 495
EV +D ++ EE++++ L+E RA RK K+F+ +D+IR L G
Sbjct: 408 --------EVFGIFEDYFKEQKAGEEEELIKLLVEVRAQLRKEKNFALADKIRTQLRELG 459
Query: 496 IALMDMGKETIWR 508
I L D + T+W+
Sbjct: 460 IQLEDTPQGTVWK 472
>gi|223478067|ref|YP_002582621.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
gi|214033293|gb|EEB74120.1| Cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
Length = 476
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/498 (42%), Positives = 299/498 (60%), Gaps = 32/498 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++IYN++T+QKE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MAIRIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RAN+ GE+P L+ R+ + +L DM L+ P PRV++HM+
Sbjct: 61 TVLMVMNFTDIDDKIIKRANETGEDPKELAERFLRIFLEDMKALKVKPADVYPRVTEHMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + + ++ AY V+F V K +YG+LS +LE+ G RV KRNP D
Sbjct: 121 EIINFVKKLEEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YWMH G + N EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELLKRYDPEVIRLFVLQRHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLRDE 372
PL+YS ++ A + + +Y TL++ VA+ F+ R+ A D R +
Sbjct: 301 PLDYSEEGIEHAKNNLERLYNTLENIRVAMGRAEISFRWDEPEFRVYEAIRDA----RRK 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKE 430
F+ M DD NT+ L F+ +++++N + + + PK+ LRK ++
Sbjct: 357 FYEAMDDDFNTAEALKAVFE-----VSNAINRYLTEVETPKES------ILRKAWEFFRD 405
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
V + GL + + ++ +RA E + LIE RA RK + F +D+IR +
Sbjct: 406 VGEVFGL-----FEDYFKE------QRAGNEEALIDLLIEVRAQLRKERKFDLADRIRDE 454
Query: 491 LTRKGIALMDMGKETIWR 508
L + GI L D + T+W+
Sbjct: 455 LRKLGIQLEDTPQGTVWK 472
>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|187629798|sp|A4XHE2.1|SYC_CALS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 465
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/487 (43%), Positives = 294/487 (60%), Gaps = 28/487 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ QEY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELAERFIQEYYKDADRLNVRRATKSPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E+ AG RV +K +P DFA
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEDLMAGARVDPSEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W+SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWNSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I +L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEELKAKFIDAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANSCSK-----------ETLTFAKDILKELCSILGIL 405
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
+ E E +++L+L+E+R ARK K+F ++D+IR +L G +
Sbjct: 406 EQYSAKE-------------EAIPQEILELVEKRNQARKAKNFLEADRIRDELKSLGYIV 452
Query: 499 MDMGKET 505
+D + T
Sbjct: 453 LDTPQGT 459
>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
gi|187631636|sp|A3QFX9.1|SYC_SHELP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 459
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/494 (44%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F PI PGKVGMYVCGVT YDL H+GH R V+FD++ RYL ++ +V
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + GE+ +L+ R QE D L P ++PR + HM +I
Sbjct: 62 NFHRNITDVDDKIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +++ D AY+ + GDV F+V P YGRLSGQ L+ +AG RV VD KR+P DF
Sbjct: 122 IEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDENKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDASTVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ ++++ PA+E +F M
Sbjct: 302 LNYSEDNLKQAKAALERLYTALKGLDLSVEA----------APASEYVA-----KFKEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + + +K++ +LG
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLK--------VDDLAAASALGVSMKQLGDVLG- 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
+L+Q D K E ++++V Q LI ER AR KD++ +D R L
Sbjct: 393 --------ILEQDVDGFFK-GEGSDDEVAQIEALIAERNRARTEKDWAAADVARDGLNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D + T WR
Sbjct: 444 GVILEDGPEGTTWR 457
>gi|347731165|ref|ZP_08864267.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
gi|347520052|gb|EGY27195.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
Length = 485
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/490 (43%), Positives = 293/490 (59%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P VPGKV MYVCG+TAYDL H+GHAR+AV FD+L RYL H +V
Sbjct: 1 MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RNFTDVDDKII RAN G + ++ +Y + DM L L +PR + H+ ++
Sbjct: 61 TFARNFTDVDDKIITRANQEGLSSQEVAEKYIATFYEDMDRLNVLRADIEPRATTHIAEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 ISLCERLIEQGKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKGAKPGEPYWESPWGRGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YW+HNG V N EKMSKSLGNF TIR I E Y P LR+FL++ HYRSP
Sbjct: 241 TEAALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++++ +D A + IY+ L L +E + + + LR F M
Sbjct: 301 IDFTFESMDEAEKNLKRIYEALGLLHAELQ--REKWTSGPLPKDVTEEFEGLRQAFADAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD+NT+ L F ++ N L+ K Q K + E R++ +E + +LG+
Sbjct: 359 EDDMNTAAALGHVFT-MVRLANRILD--NKGQRKTEGAR--ELFRRVLDEARAWTAVLGV 413
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+E L +L+ + R + V +L++ R AR +KDF+++D IR ++ GI
Sbjct: 414 FGRDP-AEFLAELRACRVARKSIDPARVEELMQARINARADKDFARADAIRDEIAALGIE 472
Query: 498 LMDMGKETIW 507
+ D +W
Sbjct: 473 VRDTPSGAVW 482
>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|259511828|sp|C6BS23.1|SYC_DESAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 485
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/494 (42%), Positives = 299/494 (60%), Gaps = 17/494 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++KE F P+ KV +Y CG+TAYDL H+GHAR++V FD+L RYL +V
Sbjct: 1 MRLYNTLNRKKEEFVPLNGNKVNLYACGITAYDLCHIGHARSSVVFDILVRYLRFKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTD+DDKII RAN+ G L+ ++ E+ VDM L L +P+ ++H+ ++
Sbjct: 61 TFVRNFTDIDDKIINRANETGVTSTELAEKFIGEFYVDMDKLNILRADIEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I D AY GDV+F V +YG+LSG+ +E+ ++G R+ K++P DF
Sbjct: 121 IELTQTLIEKDHAYATPSGDVYFKVRSFDDYGKLSGRNIEDLQSGARIQPGEEKQDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW+SPWG GRPGWH+ECSAMS Y FDIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWESPWGQGRPGWHLECSAMSEKYFELPFDIHGGGQDLSFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKEMARFWVHNGFVQINSEKMSKSLGNFFTIRDILDKFMPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHA 375
L++S L+ A + +Y L+ AL S + + + ED D
Sbjct: 301 LDFSFEALEEAEKGIRRVYSALEQTAEALNKSKWSKAALPEEVLAEIEDAEKGWADA--- 357
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK--EVLR 433
M DD+NT+ GA I + + ++K ++ + +R +E+ K EVL
Sbjct: 358 -MEDDMNTA----GAMGHMFTLIRLAGRIGEEKSWRKSEGGRDAWIRILEDMKKWGEVLG 412
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
I P E L++LK L+R + V +L+ R ARKNKDF++SD+IR +L
Sbjct: 413 IFTRDP----KEFLEELKLCMLERKGIEVAKVEELVAARQEARKNKDFARSDEIRDELIE 468
Query: 494 KGIALMDMGKETIW 507
G+ + D + +W
Sbjct: 469 LGVEVKDTPQGAVW 482
>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082075|sp|B0TLV2.1|SYC_SHEHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 459
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/496 (45%), Positives = 290/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ PGKVGMYVCGVT YDL H+GH R VSFD++ RYL + +V
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ SL+ R E D L P +PR + H+ +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCDSLTERLIAEMHKDFDSLNMARPDNEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++I D AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF
Sbjct: 122 IDMVERLIERDHAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDTKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLAHYDAATVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L A A+ IY L+D ++++ +P QE +F
Sbjct: 302 LNYSEDNLKQAKAALERIYTALKDLDLSVEAAPAQE-----------------FVAKFKT 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F D ++ IN + K ++ +L E+ +VL IL
Sbjct: 345 AMDDDFNTPEAYSVLF-DMVREIN---------RLKATDMAKASALGVALKELADVLGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
G Q D K E ++++V + LI ER AR KD+ +D R L
Sbjct: 395 G------------QDVDTFFK-GEGSDDEVAEIEALIVERNRARAEKDWPAADVARDGLN 441
Query: 493 RKGIALMDMGKETIWR 508
G+ L D + T WR
Sbjct: 442 ALGVILEDGPEGTTWR 457
>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 474
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/492 (45%), Positives = 291/492 (59%), Gaps = 23/492 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P PG+V MYVCG T Y+ HLG+ARA V FD + RYLE+ V
Sbjct: 2 IEVYNTLTKRKEPFVPREPGRVRMYVCGPTTYNYIHLGNARALVVFDTIRRYLEYRGFRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDKII+RA + +P L+ +Y + Y D + PRVSDH+ +I
Sbjct: 62 FFVQNFTDIDDKIIKRAAEEKMDPQELALKYIEAYFEDADQINIKRADVHPRVSDHLPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I+ +I+ AY EGDV+FAV K P YG+LSG++L RAG RV KR+P DFA
Sbjct: 122 VELISILIDKGFAYAAEGDVYFAVRKFPAYGKLSGRQLSELRAGARVEPGENKRDPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSW SPWG GRPGWHIECSAM+ YL +FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKAKPGEPSWPSPWGEGRPGWHIECSAMALKYLGPEFDIHGGGSDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YW+HNG +T EKMSKSLGN F +R++ E Y P A+R FL+S HYRSPL
Sbjct: 242 EAATGRPFARYWLHNGFITVKEEKMSKSLGNVFLLRKVMELYPPPAVRLFLLSTHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
Y+ L+ A+ A+ L+ + L Q+ + + ++K +F A M
Sbjct: 302 AYTPEYLEGAAKAL----SRLRSSWLFLQEAQKQAEESSGGTEQLARLDKWEQDFTAAMD 357
Query: 379 DDLNTSHILTGAFQDALKFINS--SLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT+ L F D INS L L ++ L L S R+LG
Sbjct: 358 DDFNTARAL-ALFFDLAHEINSWAELRPLPPAPVLRRALLLWVSFN----------RVLG 406
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L P V++Q +R + EE V L+E R AR+ KD++ +D+IR L GI
Sbjct: 407 LFPERRGLPVVEQ------ERTMVLEELVKLLVEIRQEARQRKDWATADRIRESLKNLGI 460
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 461 VLEDTPAGTRWR 472
>gi|358012794|ref|ZP_09144604.1| cysteinyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 473
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 298/492 (60%), Gaps = 31/492 (6%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RAN+ GE+ +L+ R+ D A L CL P PR +D+++Q+++
Sbjct: 66 VRNITDIDDKIIARANENGESISALTERFIIAMNDDAARLGCLEPDEAPRATDYIDQMQN 125
Query: 141 MITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY E GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGTAYPSENGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A + Y A +Q+ T + + + F+A M
Sbjct: 306 VNFSDFALKEAKTTLSRFYH-------AFKAYQQVYGTKTVTTLDTSFVER----FNAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
SDD NT+ + F+ I LN K++ + Q +LR + + IL L
Sbjct: 355 SDDFNTAEAIAVLFE-----IIKELNRAVKEENEAQATIFYSTLRHLTH-------ILAL 402
Query: 438 LPPGAYSEVLQQLK-DKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+ +V + LK D ++ L+E ++ LI++R A+KNKDF+ +D IR L +G+
Sbjct: 403 VQ----YDVDEFLKSDIGQEQLGLSEAEIEDLIQQRVDAKKNKDFANADAIRQSLLDQGV 458
Query: 497 ALMDMGKETIWR 508
L D + T+WR
Sbjct: 459 VLEDTRQGTVWR 470
>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 495
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/504 (44%), Positives = 314/504 (62%), Gaps = 29/504 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++Y+S+ ++K F P+ PGK +Y+CG T Y +HLGHA +A+ FD++ R L L EV
Sbjct: 4 IRLYDSIRREKVDFEPLQPGKASIYLCGPTPYAPAHLGHAYSAICFDVIRRALSWLGFEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TDV+DKI RA + GE PL+L+ R+ EY DMA L P +PRVS H+E I
Sbjct: 64 TFVRNITDVEDKIFARAAENGEEPLALAERFAAEYNADMARFGVLAPDIEPRVSTHIEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I II+N AY V+GDV+F+VE YG+LSGQ L++ RAG RV VD+RK+ PADFA
Sbjct: 124 VGLIQGIIDNGAAYPVDGDVYFSVEAFKPYGQLSGQSLDDLRAGARVEVDARKKAPADFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GE +WD+PWG GRPGWHIECSAMS +L FDIHGGG DL+FPHHENEIAQS
Sbjct: 184 LWKSAKPGELAWDAPWGRGRPGWHIECSAMSLRHLGQTFDIHGGGKDLVFPHHENEIAQS 243
Query: 259 CAA-CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
AA +D+ YWMHNG + + EKMSKSLGN F RQI + P ALR F +S HYRSP
Sbjct: 244 QAAHGEDTFARYWMHNGFLNFSGEKMSKSLGNVFGCRQIADAVGPEALRFFSVSHHYRSP 303
Query: 318 LNYSVLQLDSASDAVF-----------YIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 366
+N+ V ++D + VF Y Y TL+ + L+ ++ G+ + P A+ +
Sbjct: 304 VNFEVDEVDGVT--VFRDLEVADRRLDYFYSTLRRLDDFLATGKDPGE-GEVVPEADKLV 360
Query: 367 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
R+ ++DD NT I+ A +A K N L+ K PK + +L+K+
Sbjct: 361 PAAREA----LADDFNTP-IVIAALGEAAKLANKLLDE-PKSAPKPVRR---RTLQKLAR 411
Query: 427 EVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
E++EV +G+L P A+ L + +++ + + +V L+E+RA ARK KDF+ +
Sbjct: 412 ELREVGSAIGVLGSEPAAF---LGERRNRLAAKRNIDPAEVATLLEQRAEARKAKDFAAA 468
Query: 485 DQIRADLTRKGIALMDMGKETIWR 508
D +R + G+ ++D W+
Sbjct: 469 DALRDQIKALGVEVLDTAHGVDWK 492
>gi|419136924|ref|ZP_13681722.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377984810|gb|EHV48038.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
Length = 460
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/491 (44%), Positives = 295/491 (60%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL +V
Sbjct: 2 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI
Sbjct: 62 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF
Sbjct: 122 ISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHENEIAQ
Sbjct: 182 VLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A V+YW+H G VT N EKMSKSL +FFT+R I R+ ++R FL+SAHYR P
Sbjct: 242 STSANDGPYVNYWLHTGMVTVNKEKMSKSLNSFFTLRDILNRFDAQSVRFFLLSAHYRKP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS + A ++ +Y Q + + S ++H + R F M
Sbjct: 302 LNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRARFCGAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + +N L + +L +L+ + N +LGL
Sbjct: 346 DDDFNTPQALAILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN-------VLGL 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L A L+ D L AEL + + +LI +R+ AR+ + K+D++R +L +GI
Sbjct: 393 LEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELAEQGID 447
Query: 498 LMDMGKETIWR 508
L D+G+ T WR
Sbjct: 448 LEDVGENTSWR 458
>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6831683|sp|O67163.1|SYC_AQUAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 495
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/498 (42%), Positives = 307/498 (61%), Gaps = 14/498 (2%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+++ + E F PI P KV +Y CGVT YD SH+GH R+ + FD+ R+LEHL
Sbjct: 1 MSLRIYNTLSGKVEEFVPINPPKVLIYTCGVTVYDDSHVGHGRSLIVFDVFRRFLEHLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +VRNFTDVDDKII RA + +++++RY Y VDM +++ P +PRV++H+
Sbjct: 61 QVKFVRNFTDVDDKIINRAKQECTDFMTIADRYIARYYVDMENIRVRPADVEPRVTEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I ++I +++ AYVVEGDV+F+V+K +YG+LS + +E AG RV +KR+P D
Sbjct: 121 EIIEVIQKLVEKGYAYVVEGDVYFSVKKFKDYGKLSKRDIEELIAGARVEPSEKKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+KAGEP+WDSPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIA
Sbjct: 181 FALWKASKAGEPAWDSPWGKGRPGWHTECVAMVFKHLGETIDIHGGGLDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YWMHNG VT +KMSKSLGN+ T+R++ +YHP LR ++ HYRS
Sbjct: 241 QAEAITGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYTKYHPDVLRLLVLFTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +++ A + ++D E+ K +P E + + + F+A
Sbjct: 301 PLDFSWEKMEETLKAYERLKNAIEDLELLKKLQVVESKEGGTHPLYEQ-VKEFEENFYAS 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL---- 432
+SDD NT L+ ++ + LN +K K + +++ E L E K +L
Sbjct: 360 LSDDFNTPEALSHVYK-----LVGELNKVKNKAYSEGKITDRE-LSAYEFASKSLLNTMK 413
Query: 433 RILGLLPPGAYSEV-LQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRAD 490
+I GLL Y E ++++ ++ L+ ++ +E ++Q LIE R ARK K F +D IR
Sbjct: 414 KIFGLL-EDLYPECKVERVVERELEAGQVFDEKLIQILIEARNIARKEKVFKVADYIRDK 472
Query: 491 LTRKGIALMDMGKETIWR 508
L GI L D T W+
Sbjct: 473 LKELGIVLEDTPAGTKWK 490
>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229558797|sp|B6YUQ3.1|SYC_THEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 476
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/493 (41%), Positives = 295/493 (59%), Gaps = 22/493 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN++T+QKE F P+ G+V MYVCG T YD +HLGHAR ++FD++ RYLEH
Sbjct: 1 MAIRVYNTLTKQKEEFRPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKIIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++
Sbjct: 61 TVLMVMNFTDIDDKIIRRANETGEDPKELAEKFLRYFLEDMKALKVKPADIYPRVTEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D + ++ AY V+F V K +YG+LSG +LE G RV K+NP D
Sbjct: 121 DIIDFVRKLQEKGYAYEGNDGVYFEVRKFKDYGKLSGIKLEELVKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V + EKMSKSLGNF TIR++ ++Y P +R F++ HYRS
Sbjct: 241 QSEACTGHEWVRYWLHTGFVMVSGEKMSKSLGNFVTIRELLQKYSPEVIRFFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ + A + + +Y TL++ VA+ + + + + R +F+
Sbjct: 301 PLDYTEEGIQHAKNNLERLYNTLENIRVAMEKADVAFRWDEEEFELYETVREARKKFYDA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L F+ +++++N K K ++ L ++L E +I+
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAVNRYLTKVEKPKESVLRKAL--------EFFKIV- 406
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKG 495
SEV +D ++ EE +++ L+ RA RK ++F+ +D+IR +L G
Sbjct: 407 -------SEVFGLFEDYFKEQKAGDEEALIELLVSVRAELRKQRNFTLADKIRDELKALG 459
Query: 496 IALMDMGKETIWR 508
I L D + TIW+
Sbjct: 460 IQLEDTPQGTIWK 472
>gi|419765672|ref|ZP_14291901.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741410|gb|EJK88639.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 471
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/496 (44%), Positives = 298/496 (60%), Gaps = 35/496 (7%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
++++ +K+ N++ QKEL P+ K+GMYVCGVT YDL HLGHAR V+FD++ RYL
Sbjct: 8 EVNVMIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRF 67
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
+VT+VRN TD+DDKII+RA D GE+ SL+ R E +D A L LPP +PR ++
Sbjct: 68 RGYDVTFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTE 127
Query: 134 HMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR
Sbjct: 128 HIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKR 187
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHE
Sbjct: 188 DPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCRYLGTHFDIHGGGSDLIFPHHE 247
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SA
Sbjct: 248 NEIAQSTSANVGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSA 307
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYR PLNYS + A ++ +Y Q + + S ++H + R
Sbjct: 308 HYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--------------DAWRAR 351
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT L F+ + +N L + +L +L+ + N
Sbjct: 352 FCEAMDDDFNTPQALAILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN------ 399
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGLL A L+ D L AEL + + +LI +R+ AR+ + K+D++R +L
Sbjct: 400 -VLGLLEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELA 453
Query: 493 RKGIALMDMGKETIWR 508
+GI L D+G+ T WR
Sbjct: 454 EQGIDLEDVGENTSWR 469
>gi|423080651|ref|ZP_17069270.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
gi|423085098|ref|ZP_17073555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357550746|gb|EHJ32555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357552715|gb|EHJ34482.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
Length = 467
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 301/493 (61%), Gaps = 29/493 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 1 MSVKVYNTLTRAKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++
Sbjct: 61 DVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P D
Sbjct: 121 QIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+
Sbjct: 241 QSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR-INPAAEDCINKLRDEFHA 375
P+N+S L+ A + +Y T + E LS E T + I E ++ R +F
Sbjct: 301 PVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEIELVKE--LDNFRQKFID 358
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 359 AMDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVL 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
++ + KD L ++D+ +LI++R A+KNK+F +D IR L G
Sbjct: 408 N---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMG 452
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 453 IVLEDTRQGVKWK 465
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7.1|SYC_MARAV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/495 (45%), Positives = 297/495 (60%), Gaps = 41/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++TQQKE F + PGKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 1 MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L++R + D A L L P +PR + ++ I
Sbjct: 61 HYVRNITDIDDKILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNEEPRATAFIDDI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY + GDV+FAVE P+YG+LS ++LE+ AG RV V KR+PADF
Sbjct: 121 IAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEAKRSPADF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS
Sbjct: 241 SECATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRYFLVSSHYRSQ 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRD-EFHA 375
++YS L A + +Y L+ I PA E D D F
Sbjct: 301 VDYSEDNLAEAGRTLTKLYHALRG----------------IVPAKEADVAETDHDRRFAE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ + L + + +N +++ + E+ ++ + + +L
Sbjct: 345 VMDDDFNTAGAIA-----VLHAVANDINHYRREGDE-------EAAKRSAAVLVRLGAVL 392
Query: 436 GLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GLL P A+ + A +ELT ED+ +I+ RA ARK KDF+++D+IR DL
Sbjct: 393 GLLQQNPEAFFQ--------ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLE 444
Query: 494 KGIALMDMGKETIWR 508
KGI L D + T WR
Sbjct: 445 KGIILDDSREGTTWR 459
>gi|308273875|emb|CBX30475.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 478
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/497 (42%), Positives = 311/497 (62%), Gaps = 27/497 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN++ ++K F P+ PGKV MYVCG T YD H+GHAR+ + FD++ +YL
Sbjct: 1 MSLRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII RA LG ++ RY +E+ DM L T +P+ ++H++
Sbjct: 61 EVTYVRNFTDVDDKIINRAVQLGIESHEVAERYIKEFYEDMDALNIKRATIEPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +I ++ + AY ++GD++++V+K +YG+LSG++LE+ AG RV +D RK NP D
Sbjct: 121 KIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDERKNNPFD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+ K GEP W+SPWG GRPGWHIECSAMS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG V N+EKMSKSLGNF I+ I + YHP ++R FL+S HYRS
Sbjct: 241 QSEGAFEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDILKSYHPDSVRLFLLSNHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDEF 373
P++++ ++ + A+ IY +Q E + A I +D IN ++F
Sbjct: 301 PIDFTDKAMEESEAALDKIYSAIQRVE----------EIADI--TGKDFINYPEGYWEKF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + G D+++ IN +L + + ++I S I +++++
Sbjct: 349 CESMDDDFNTAKGI-GYLFDSVRHIN---RLLDENSNSDEIKTIINS---IYADIRKMGD 401
Query: 434 ILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
++G+L P Y + K K ++ ++ + L+++R ARK KD+ K+D+IR L
Sbjct: 402 VIGILSEPAEIY---FNKKKTKFIETKDVDPSLIDALVKQRFEARKAKDWKKADRIRDKL 458
Query: 492 TRKGIALMDMGKETIWR 508
+ + + D + +IW+
Sbjct: 459 SGIDVIIEDKPEGSIWK 475
>gi|423089340|ref|ZP_17077700.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
gi|357558276|gb|EHJ39775.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
Length = 467
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/492 (42%), Positives = 301/492 (61%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 1 MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++
Sbjct: 61 DVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P D
Sbjct: 121 QIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+
Sbjct: 241 QSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A + +Y T + E LS E T + ++ ++ R +F
Sbjct: 301 PVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 MDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN 408
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
++ + KD L ++D+ +LI++R A+KNK+F +D IR L GI
Sbjct: 409 ---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGI 453
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 454 VLEDTRQGVKWK 465
>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
Length = 467
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/492 (42%), Positives = 301/492 (61%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 1 MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++
Sbjct: 61 DVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P D
Sbjct: 121 QIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+
Sbjct: 241 QSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A + +Y T + E LS E T + ++ ++ R +F
Sbjct: 301 PVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDGFRQKFIDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 MDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN 408
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
++ + KD L ++D+ +LI++R A+KNK+F +D IR L GI
Sbjct: 409 ---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGI 453
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 454 VLEDTRQGVKWK 465
>gi|397663742|ref|YP_006505280.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395127153|emb|CCD05341.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/496 (43%), Positives = 296/496 (59%), Gaps = 51/496 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + PGK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ G + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ D AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKDSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQINGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT L+ FQ L + K +L +L+ + IL
Sbjct: 346 AMNDDFNTPVALSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------IL 386
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLT 492
G L Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL
Sbjct: 387 GFL----------QKDPESFLQSGLAEEEKLVIEQLIAERLKARAERNWAKADQIRADLL 436
Query: 493 RKGIALMDMGKETIWR 508
KGI L D T WR
Sbjct: 437 SKGIELEDGATGTTWR 452
>gi|452852528|ref|YP_007494212.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
gi|451896182|emb|CCH49061.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
Length = 485
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/494 (42%), Positives = 302/494 (61%), Gaps = 17/494 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ +QK+ FTPI KV MYVCG+TAYDL H+GHAR++V FD+LYRYL H +V
Sbjct: 1 MRLYNTLARQKQEFTPIHENKVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGFDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T++RNFTD+DDKII+RAN++G+ ++ ++ E+ VDM L +P+ ++H+ ++
Sbjct: 61 TFIRNFTDIDDKIIKRANEVGKEAGEIAEKFIGEFYVDMDRLSVNRADIEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I D AY GDV+F V +YG+LSG+ ++ +G R+A K++P DF
Sbjct: 121 IALTQHLIETDHAYATPSGDVYFRVRSFEDYGKLSGRNVDELESGARIAPGEEKQDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK GEPSW+SPWG GRPGWH+ECSAMS Y DIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKGAKPGEPSWESPWGQGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA YW+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKPFAKYWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
L++S L+ A + IY L +V L+ Q + +P E+ + +L DE
Sbjct: 301 LDFSFEALEEAEKGIKRIYSALAQADVELAKTQ-----WKKSPFPEELVTEL-DEIEKHW 354
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD+NT+ GA I + +++ K ++ + + L +I +++K
Sbjct: 355 VEAMEDDMNTA----GALGHVFSAIRLTGRIVEDKNLRKSEGGR-DMLLRIMDDMKTWGA 409
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LG+ + L +L+D R+++ V +L+ R AR NKDF KSD IR +L
Sbjct: 410 VLGIFECQP-EDFLVELRDNRAVRSDIDPVRVQKLLGARKEARANKDFEKSDAIRDELMA 468
Query: 494 KGIALMDMGKETIW 507
+ + D + W
Sbjct: 469 MKVEVKDTPQGATW 482
>gi|334143779|ref|YP_004536935.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964690|gb|AEG31456.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 458
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 292/495 (58%), Gaps = 42/495 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN+ T+QKE+F PIVPGKVGMYVCGVT YD H+GHAR V FD + R++
Sbjct: 1 MALHIYNTETRQKEVFKPIVPGKVGMYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YVRN TD+DDKII+RA + E+ SL+ R+ D L L P +P+ +D +
Sbjct: 61 EVKYVRNITDIDDKIIKRALENQESVQSLTERFITAMHEDETALNILRPDIEPKATDFIP 120
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I+ ++ +I AY GDV+F V+ +YGRLSG++ + AG RV V+ K++P
Sbjct: 121 EIQQLVNTLIEKGHAYAATNGDVYFKVKSFESYGRLSGKKQDELEAGARVEVNPNKQDPM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+KA EP+WDS WG GRPGWHIECSAMS + + DIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKASKANEPAWDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + V+ WMH G V +NEKMSKSL NFFTIR++ + YHP +R+FL+S+HYR
Sbjct: 241 AQSECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFLLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLNY++ LD A + +Y L+ A I P + +F+
Sbjct: 301 SPLNYTIENLDIAKTNLARLYTALE--------------AATIQPGLVAVGTEFEAKFND 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F+ L K+ K QQ L+ L+ + N L
Sbjct: 347 AMDDDFNTPQAMAVLFE------------LVKEVNKTQQPELVGLLQSLANR-------L 387
Query: 436 GLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GLL P + K + + L++E + LI ER AR +K++++SD+IR DL
Sbjct: 388 GLLTETPEFF------FKSQVGQPDGLSDEAIEALIVERTQARADKNWARSDEIRDDLLA 441
Query: 494 KGIALMDMGKETIWR 508
KG+ L+D + T WR
Sbjct: 442 KGVELLDSKEGTSWR 456
>gi|226735064|sp|B8CRG0.1|SYC_SHEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 459
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/494 (45%), Positives = 290/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+QKE F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ SL+ R E D L P ++PR + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCDSLTERLIGEMHRDFDSLNMARPDFEPRATLHMPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF
Sbjct: 122 IEMVEKLIAREHAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLNHYDAATVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A + IY L+D ++ + AE I +F M
Sbjct: 302 LNYSEENLKQAKSGLERIYTALKDLDLTVDA-----------APAEAFIA----QFKRAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ + +N LK QQ +L +L+++ +VL ILG
Sbjct: 347 DDDFNTPEAYSVLFE-----MVREINRLKLTD-MQQASALGVALKQL----ADVLGILG- 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
Q D K E ++++V + LI ER AR KD+ +D R L
Sbjct: 396 -----------QDVDTFFK-GEGSDDEVAEIEALIVERNRARTEKDWPAADVARDGLNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D + T WR
Sbjct: 444 GVILEDGPEGTTWR 457
>gi|387813875|ref|YP_005429358.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338888|emb|CCG94935.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 463
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/493 (45%), Positives = 297/493 (60%), Gaps = 37/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++TQQKE F + PGKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 1 MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L++R + D A L L P +PR + ++ I
Sbjct: 61 HYVRNITDIDDKILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNDEPRATAFIDDI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY + GDV+FAVE P+YG+LS ++LE+ AG RV V KR+PADF
Sbjct: 121 IAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEAKRSPADF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS
Sbjct: 241 SECATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRYFLVSSHYRSQ 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A + +Y L+ + P K A + D F M
Sbjct: 301 VDYSEDNLAEAGRTLTKLYHALR----GIVP----AKGADVAETDHD------RRFAEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + L + + +N +++ + E+ ++ + + +LGL
Sbjct: 347 DDDFNTAGAIA-----VLHAVANDINHYRREGDE-------EAAKRSAAVLVRLGAVLGL 394
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + A +ELT ED+ +I+ RA ARK KDF+++D+IR DL KG
Sbjct: 395 LQQNPEAFFQ--------ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILDDSREGTTWR 459
>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|187631638|sp|A8FTH6.1|SYC_SHESH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 459
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/494 (44%), Positives = 292/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ PGKVGMYVCG+T YDL H+GH R VSFD++ RYL + +V
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RN TDVDDKII+RAN+ E+ SL+ R E D L P ++PR + H+ +I
Sbjct: 62 NFLRNITDVDDKIIKRANENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++I + AYV GDV F+V P YGRLSGQ L+ +AG RV V+ KR+P DF
Sbjct: 122 IDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGARVEVEDTKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLEHYDAATVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ ++++ +A++ + K F M
Sbjct: 302 LNYSEDNLKQAKSALERLYTSLKGLDLSVEA-----------ASADEYVAK----FKVAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKK-KQPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT + F+ + +N LK+ K L + ++KE+ +LG
Sbjct: 347 DDDFNTPEAYSVLFE-----MVREINRLKEADNAKASSLGV---------KLKELADVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+L Q D K T+E ++ LI ER AR KD+ +D R L
Sbjct: 393 ---------ILDQDVDTFFKGEGSTDEVAEIEALIAERNRARAEKDWPAADVARDGLNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D + T WR
Sbjct: 444 GVILEDGPEGTTWR 457
>gi|336323676|ref|YP_004603643.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107257|gb|AEI15075.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
Length = 477
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/495 (42%), Positives = 304/495 (61%), Gaps = 29/495 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ KE+F PI V MYVCGVT YD H+GHAR+AV FD RY+++ +V
Sbjct: 2 LKIYNTLNACKEIFEPINDNNVNMYVCGVTVYDKCHVGHARSAVVFDTARRYMKYRGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTD+DDKII ++ + G + ++ +Y +E+ DM L P Y+P+ +D+++ +
Sbjct: 62 TFVKNFTDIDDKIINKSKETGISWKEITEKYIREHDYDMNKLNVKKPDYEPKATDYIDDM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +++I AY ++GDV+F V+ YG+LS + +E +AG R+ + K +P DFA
Sbjct: 122 IELCSKLIEKGNAYEIDGDVYFRVKSFQEYGKLSNRDIEELKAGTRIELRDNKEDPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEP W+SPWG GRPGWHIECS MS+ L FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKSKEGEPGWESPWGKGRPGWHIECSVMSSKILGLPFDIHGGGKDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A+C YWMHNG V N EKMSKSLGNFFTIR I E + P +LR+FL++ HYRSPL
Sbjct: 242 EASCGCQFAKYWMHNGFVNINKEKMSKSLGNFFTIRDIIEEFEPESLRYFLLTTHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-- 376
++S +L A A+ IY TL D V K R D +N +++ F
Sbjct: 302 DFSEDKLIEAESALDRIY-TLIDSMVTY-------KAGRKGKNLLDEVNSIKEHFEKDFI 353
Query: 377 --MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR- 433
M DD NT+ L+ F+ K +N+L + +P ++ +SL+ N++ E++R
Sbjct: 354 EAMDDDFNTAAALSVIFEYIRK-----MNVLLENKPDKESF---KSLKNQFNDILEIVRS 405
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
LG+ + +D + E+++ + I +R RKNK+F K+D+IR +L +
Sbjct: 406 TLGI--------AAKTPEDWFRANLSIPEKELFEKINQRNEYRKNKEFDKADKIRDELEK 457
Query: 494 KGIALMDMGKETIWR 508
KG+ L+D + T +R
Sbjct: 458 KGVELLDTPEGTKYR 472
>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 459
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/494 (45%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F PI PGK+GMYVCG+T YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + E+ SL+ R E D L P ++PR + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRAAENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHMPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++I D AYV GDV F+V P YGRLSGQ +E +AG RV V+ KR+P DF
Sbjct: 122 IDMVEKLIEKDHAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGARVEVEDTKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A S V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTSYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLNHYDAGTIRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ ++++ + A + + K F A M
Sbjct: 302 LNYSEDNLKQAKSALERLYTSLKGLDLSVE-----------SADASEFVAK----FKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ + +N +K S I + + ++KE+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFE-----MVREINRVKG--------SDIAAASALGVKLKELAEVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L+Q D K E ++++V Q LI ER AR KD+ +D R L
Sbjct: 394 ---------LEQDVDTFFK-GEGSDDEVAQIEALIVERNRARAEKDWPAADIARDGLNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 444 GVILEDGPSGTTWR 457
>gi|344995511|ref|YP_004797854.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963730|gb|AEM72877.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 465
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/488 (43%), Positives = 293/488 (60%), Gaps = 30/488 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+++Q KE F P+ KV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ +EY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGITVFELARRFIEEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DF
Sbjct: 121 IALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ + + I L+ +F M
Sbjct: 301 NFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSESDDKLKAAIEDLKAKFIEAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANSCSK-----------EALTFAKDTLKELCGILGIL 405
Query: 439 PP-GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
GA E + Q ++L+L+E+R ARK K+F+++D+IR +L G
Sbjct: 406 EQYGAKEEAIPQ--------------EILELVEKRNQARKVKNFAEADRIRDELKSLGYI 451
Query: 498 LMDMGKET 505
++D + T
Sbjct: 452 VLDTPQGT 459
>gi|406037361|ref|ZP_11044725.1| cysteinyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 473
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE L+ R+ D A+L C+ P P+ +++++Q++
Sbjct: 66 IRNITDIDDKIIARANENGETIQQLTARFIDAMNEDAANLGCVLPDEAPKATEYIDQMQS 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI +++N AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIATLVDNGTAYPAANGDVYFEVTKFDKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A A+ Y + + + Q +G+ E F+A M
Sbjct: 306 VNFSDFALKEAKTALSRFYHSFKAYQ------QMYGQ-----KTVETLEQGFVKRFNAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q L +LR + N ILGL
Sbjct: 355 RDDFNTAETMAVLFE-----LNKELNRAVKEETAEQATVLYSTLRYLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+++D IR L +G+
Sbjct: 403 VQHDVDEFLKSDIGQEALS---LSDTEIENFIQQRVDAKKAKDFAQADAIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 472
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 294/496 (59%), Gaps = 33/496 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+ N++T++KE F P+ V MYVCG T YD +H+GHAR+AV FD++ R+LE+ V
Sbjct: 2 IKVTNTLTERKEEFKPLEGKTVKMYVCGPTVYDHAHIGHARSAVVFDVIRRWLEYRGYRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN+TDVDDKII+R+ + G +S +Y Y DM L PTY+P+V++H+ +I
Sbjct: 62 IFVRNYTDVDDKIIKRSKEEGIPWYEVSKKYIASYEEDMEALNVKEPTYKPKVTEHIREI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI +I AY +GDV+F+VE P YG+LS ++ E AG RV +K+NP DFA
Sbjct: 122 IEMIDGLIQKGHAYEADGDVYFSVESFPEYGKLSKRKTEELLAGARVEPGEKKKNPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEP W+SPWG GRPGWHIECSAMS YL DIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKSKEGEPGWESPWGVGRPGWHIECSAMSMKYLGETIDIHGGGFDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ + YW+HNG V N EKMSKSLGNFFTI++I +++ P LR FL+S HYRSP+
Sbjct: 242 ESYTGKTFARYWIHNGFVMVNREKMSKSLGNFFTIKEILKQFSPDTLRLFLLSTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+++V +L A A+ + ++ + +E K I+ + R EF A M
Sbjct: 302 DFTVERLKEAERALKRLTTFIESVKAVEKLPEEGEKGEPID------VESARREFEAAMD 355
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL------SLIESLRKIENEVKEVL 432
DD NT+ L GA + +K N LK K K+Q++ SL+++ R EN L
Sbjct: 356 DDFNTAKAL-GALYELVK----RANTLKDKALKRQKITPSERESLVDAARFTEN----AL 406
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+ LG SE L E + LI+ R RK K+F +D IR L
Sbjct: 407 KTLGFKLEREQSE------------GGLEEALIELLIQVRGELRKKKEFQLADLIRDRLK 454
Query: 493 RKGIALMDMGKETIWR 508
GI L D+ T++R
Sbjct: 455 ELGITLEDLPTGTVYR 470
>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
gi|400927240|ref|YP_001086515.2| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
gi|347595718|sp|Q18CD5.2|SYC_CLOD6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
Length = 465
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 299/490 (61%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++QI
Sbjct: 61 TYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF
Sbjct: 121 IEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+
Sbjct: 241 EARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ A + +Y T + E LS E T + ++ ++ R +F M
Sbjct: 301 NFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 DDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN-- 406
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
++ + KD L ++D+ +LI++R A+KNK+F +D IR L GI L
Sbjct: 407 -------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVL 453
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 454 EDTRQGVKWK 463
>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
Length = 465
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 299/490 (61%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++QI
Sbjct: 61 TYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF
Sbjct: 121 IEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+
Sbjct: 241 EARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ A + +Y T + E LS E T + ++ ++ R +F M
Sbjct: 301 NFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDGFRQKFIDAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 DDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN-- 406
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
++ + KD L ++D+ +LI++R A+KNK+F +D IR L GI L
Sbjct: 407 -------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVL 453
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 454 EDTRQGVKWK 463
>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 485
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/494 (44%), Positives = 296/494 (59%), Gaps = 17/494 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYNS+T++KE F P+ PG V MYVCG+TAYD H+GHAR+AV FD+L RYL ++ +V
Sbjct: 1 MQIYNSLTRKKEEFIPLKPGHVSMYVCGITAYDYCHIGHARSAVVFDVLVRYLRYIGMQV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII RAN G + S++ Y + DM L L +P+ ++H++++
Sbjct: 61 TFVRNFTDVDDKIINRANREGTDFESIARSYIDAFYTDMDRLGILRADIEPKATEHIKEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AY GDV+F V +YG+LSG+ +E+ +G R+ K +P DF
Sbjct: 121 IELCENLIAKKHAYSTPSGDVYFRVRSYADYGKLSGRNIEDLMSGARIEPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK GEPSW SPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENE AQ
Sbjct: 181 ALWKGAKPGEPSWPSPWGPGRPGWHIECSAMSERYLPLPFDIHGGGQDLAFPHHENERAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA V YW+HNG V N+EKMSKSL NF TIR I Y P LR FLI+ HYRSP
Sbjct: 241 TEAATDKQFVRYWVHNGFVQINSEKMSKSLNNFVTIRDILANYLPEVLRFFLITKHYRSP 300
Query: 318 LNYSVLQLDSASDAV--FYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
L+Y+ L+ + A+ Y+ +T + VA + + A I A K D
Sbjct: 301 LDYTSDALEESERALKRIYLTKTAAEAHVAGTKWTATPLPAEIVVEATALEAKWDDS--- 357
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSL--NMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD+NT+ L F +K +N L LKK +Q +I K+ EVL
Sbjct: 358 -MADDMNTAAALGHVFV-LMKIVNRILEDKTLKK---SEQGRDMIRHALKLFERWGEVLG 412
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+ L+P S+ L QLK+ + R ++ + V ++ER AR KDF++SD IR +L
Sbjct: 413 LF-LMPS---SDFLTQLKESRVLRRKIDTDLVQTKLQERKEARAAKDFARSDAIRDELLA 468
Query: 494 KGIALMDMGKETIW 507
G+ + D + W
Sbjct: 469 LGVTIQDTAQGVQW 482
>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 494
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/504 (41%), Positives = 302/504 (59%), Gaps = 17/504 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + I+N+ T +KE FTP+ V MYVCG+T YD H+GHAR+ + FD+LYRYL H +
Sbjct: 1 MPILIHNTKTNRKEPFTPLTDNHVRMYVCGITVYDYCHIGHARSVLVFDMLYRYLRHRRY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTD+DDKII+RA + + LS R+ Q + DMA L PPT +P+ ++H+
Sbjct: 61 DVTFVRNFTDIDDKIIKRAAEQQTSCQELSQRFIQAFHEDMAALGTEPPTLEPKATEHLP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I ++I AY GDV+F V YG+LS + L+ R+G R+AV+ K +P D
Sbjct: 121 EMIALIEELIAKGLAYPAGGDVYFRVRNFTEYGKLSHRALDEMRSGARIAVNELKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K EP+W+SPWGPGRPGWHIECSAM YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FVLWKGSKPEEPAWESPWGPGRPGWHIECSAMGRKYLGETFDIHGGGKDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A ++W+H+G VT +EKM+KSLGNF TIR + ++Y LR L S HYR+
Sbjct: 241 QSEGATGKPFANFWIHHGFVTIKDEKMAKSLGNFLTIRDVLKQYPAEVLRLLLFSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG---KTARINPAAEDCINKLRDEF 373
P++YS + A A+ +Y L A+ G T+ I ++ L +F
Sbjct: 301 PVDYSEAAMADAETALSRLYAAL----AAVGKLPAGGAPEATSVITAKDRQKLDNLESDF 356
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
H M D N++ L G F D +K IN +++ P +E LR +++E+
Sbjct: 357 HQAMDIDFNSAKAL-GRFFDTVKIINK----VRQALPATPATRDLELLRDSAAKLRELGG 411
Query: 434 ILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
I GLL P AY L + +++ L ++T ++ +L+ +R AR+N D++++D+IR L
Sbjct: 412 IFGLLQEDPAAY---LARRQERLLAGLDITPGEIEKLLAQRQTARQNGDWAEADRIRDLL 468
Query: 492 TRKGIALMDMGKETIWRPCVLVEQ 515
K IA+ D T W + V Q
Sbjct: 469 AAKKIAIKDGPDGTSWEVQLSVHQ 492
>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 466
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/501 (44%), Positives = 291/501 (58%), Gaps = 45/501 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ FTPIV GKV MYVCG+T YD HLGHAR V FD++ R+L V
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRASGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ E L+ R+ D A L L P +P+ ++ ++ +
Sbjct: 62 TYVRNVTDIDDKIIKRANENNETIAQLTQRFIDAMDEDSAKLGVLRPDLEPKATEFVDGM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY GDVF++V YG+LSG+ LE+ RAGERV VDS K++P DF
Sbjct: 122 LSMIAALIDKGFAYPAANGDVFYSVSSFQGYGKLSGKSLEDLRAGERVEVDSFKKDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSW+SPWG GRPGWHIECSAMS+H+L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWESPWGKGRPGWHIECSAMSSHHLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAA-------CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
S AA CQ V+YWMHNG V ++EKMSKSLGNFFTIR + E+Y +R F++
Sbjct: 242 SEAAHSHDGKPCQ--MVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEQYDAEVIRFFIL 299
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKL 369
AHYRSPLNYS L+ A A+ +Y L+ +V+ +H AR
Sbjct: 300 RAHYRSPLNYSDQHLNDAKLALTRLYTALRGVDVSDDAIDWQHPYAAR------------ 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M DD NT + F D +N K K + L +K
Sbjct: 348 ---FKLAMDDDFNTPEAMAVLF-DLANEVN------KTKSTEAAGL------------LK 385
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+ +LGLL + + + E DV +I +R A++ K+F+++D+IR
Sbjct: 386 GLASVLGLLSRKSDEFLQAKTNANGAANDGAAELDVDAMIVKRLEAKQAKNFAEADRIRK 445
Query: 490 DLTRKGIALMDMGKETIWRPC 510
+L GI L D + T WR
Sbjct: 446 ELAEAGIILEDTPQGTTWRSA 466
>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 462
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/496 (44%), Positives = 299/496 (60%), Gaps = 43/496 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYNS+T+ K++FTPI PGKV MYVCG+T YD H+GHAR +SFD++YR+L+ L E
Sbjct: 3 SLQIYNSLTRSKQVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKALGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII RA + GE+ SL+ R+ Q D + L LPP ++PR ++++ +
Sbjct: 63 VTYVRNITDIDDKIINRAGENGESISSLTARFTQYMHEDTSALGILPPDHEPRATEYVPE 122
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ ++I ++ N AY E GDV ++V YG+LSG+ L++ RAGERV V++ KR+P D
Sbjct: 123 MLELIAKLEKNGLAYQSEDGDVNYSVRDFRGYGKLSGKSLDDLRAGERVDVNTGKRDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AK EP W S WG GRPGWHIECSAMS+ L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKSAKPSEPDEAKWSSRWGAGRPGWHIECSAMSSKLLGDHFDIHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A V+YWMHNG V +NEKMSKSLGNFFTIR + + Y LR F+I +H
Sbjct: 243 EIAQSEGASGHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKNYDAEVLRFFIIRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS LD A A+ +Y L+D +V P ++ E + F
Sbjct: 303 YRSPLNYSDAHLDDARSALTRLYTALKDIDVQDKP---------VDWQEEHAV-----RF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F+ + + +N + Q +L L +E + ++ L+
Sbjct: 349 SRAMNDDFNTPEAVAVLFE-----LANEVNRTHSVEVASQLKALGSVLGLLERDPRQFLQ 403
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
G + E E+ + I+ R A+K +DF+K+D+IR +L
Sbjct: 404 GNGTVD-------------------ENEEKWIEAQIQARREAKKTRDFAKADKIRNELLE 444
Query: 494 KGIALMDM-GKETIWR 508
KGI L D G +T WR
Sbjct: 445 KGIVLEDKPGGKTEWR 460
>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
Length = 467
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/492 (42%), Positives = 300/492 (60%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 1 MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++
Sbjct: 61 DVTYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P D
Sbjct: 121 QIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+
Sbjct: 241 QSEARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A + +Y T + E LS E T + ++ ++ R +F
Sbjct: 301 PVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 MDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN 408
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
++ + KD L ++D+ +LI++R A+KNK+F +D IR L GI
Sbjct: 409 ---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGI 453
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 454 VLEDTRQGVKWK 465
>gi|376297517|ref|YP_005168747.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 485
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 305/495 (61%), Gaps = 19/495 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++KE FTP V MYVCG+TAYDL H+GHAR++V FD+LYRYL+H +V
Sbjct: 1 MRLYNTLKRRKEEFTPAHNNDVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLKHEGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RNFTD+DDKII+RAN++G+ ++ ++ E+ VDM L P+ +P+ ++H+ ++
Sbjct: 61 NFIRNFTDIDDKIIKRANEVGKEASEIAEKFIGEFYVDMDRLNIERPSVEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I+ AY GDV+F V YG+LSG+ ++ +G R+A K +P DF
Sbjct: 121 IALTQRLIDKGHAYATPSGDVYFKVRSFEGYGKLSGRNIDELESGARIAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP W+SPWG GRPGWH+ECSAMS Y DIHGGG DL FPHHENE+AQ
Sbjct: 181 ALWKAAKPGEPFWESPWGKGRPGWHLECSAMSEKYADLPLDIHGGGQDLAFPHHENEVAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+HNG V N+EKMSKSLGNFFTIR I ++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKPFANYWVHNGFVQINSEKMSKSLGNFFTIRDILAKFLPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQEHGKTARINPAAEDCINKLRD---E 372
L++S L+ A + IY L D E+A +++ +P E+ + +L D
Sbjct: 301 LDFSFDALEEAEKGLKRIYSALNQIDEELARDKWKK-------SPFPEELVKELDDLEKH 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M+DDLNT+ GA I + + + K ++ + + +I+ ++ +
Sbjct: 354 FAEAMADDLNTA----GALGHVFSAIRLAGRVAEDKNLRKSEGGR-DLFARIKADMADWA 408
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LG+ +E L +L+D RA + V +L++ RA ARK+KDF++SD IR +L
Sbjct: 409 SVLGIFERKP-AEFLLELRDSRAARAGIDPAKVRELLDARAQARKDKDFARSDAIRDELA 467
Query: 493 RKGIALMDMGKETIW 507
+ + D + W
Sbjct: 468 AMQVEVHDTPQGATW 482
>gi|350564143|ref|ZP_08932962.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349778143|gb|EGZ32502.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 456
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 295/494 (59%), Gaps = 42/494 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+ T+QKE F PIVPGKVG+YVCGVT YD H+GHAR V FD + R++
Sbjct: 1 MSLQIYNTETRQKETFKPIVPGKVGIYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YVRN TD+DDKII RA + E+ SL+ R+ + D L L P +P+ +D +
Sbjct: 61 EVKYVRNITDIDDKIINRAFENQESVQSLTERFIKAMHEDETALNILRPDIEPKATDFIP 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I+ ++ +I AY GDV+F V+ +YGRLSG++ E+ AG RV ++ K++P
Sbjct: 121 EIQQLVNTLIEKGHAYAAPNGDVYFKVKSFESYGRLSGKKQEDLEAGARVEINPNKQDPM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+K EP+WDS WG GRPGWHIECSAMS + + DIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKASKENEPAWDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + V+ WMH G V +NEKMSKSL NFFTIR++ + YHP +R+FL+S+HYR
Sbjct: 241 AQSECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFLLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLNY++ LD A + +Y LQ E L AE+ +F+
Sbjct: 301 SPLNYTIENLDIAKTNLARLYTALQAAEPGL--------------VAENT--DFEAKFNE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F+ L K+ K QQ L+ L+ + N L
Sbjct: 345 AMDDDFNTPQAMAVLFE------------LVKEVNKTQQPGLVALLQSLANR-------L 385
Query: 436 GLLPPGAYSEVLQQ-LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
GLL +E Q K + + LT++ + LI ER AR +K++++SD+IR +L K
Sbjct: 386 GLL-----TETPQSFFKSQVGQTDGLTDDAIEALIVERTQARADKNWARSDEIRDELLAK 440
Query: 495 GIALMDMGKETIWR 508
G+ L+D + T WR
Sbjct: 441 GVELLDGKEGTSWR 454
>gi|406897287|gb|EKD41287.1| hypothetical protein ACD_73C00777G0001 [uncultured bacterium]
Length = 482
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/487 (43%), Positives = 295/487 (60%), Gaps = 19/487 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+QKE F P+ KVGMYVCGVT YD HLGHARA V+FD++YRYL
Sbjct: 1 MPLFVYNTLTRQKEEFKPLHAPKVGMYVCGVTVYDECHLGHARALVNFDVIYRYLSFRGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+VRNFTDVDDKII +A G + S++ +Y + D+ L PPT +P+ ++H+E
Sbjct: 61 DVTFVRNFTDVDDKIINKAIKEGSDWKSVAEKYIATFHRDVTALGLKPPTIEPKATEHIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I + N AY GDVF+ V + +YG+LSG+++E +G R+ + K +P D
Sbjct: 121 EMLSLIGTLEKNGFAYPAGGDVFYKVRQKNDYGKLSGKKIEELESGARIEILEAKTDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GEPSW S WG GRPGWHIECSAMS YL FDIHGGG DL FPHHENEIA
Sbjct: 181 FALWKGSKPGEPSWASHWGEGRPGWHIECSAMSMKYLGETFDIHGGGRDLSFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA YW+HNG V N EKMSKSLGNF TIR++ E+YHP LR F+++A YRS
Sbjct: 241 QSEAATGKLFAKYWLHNGFVNINAEKMSKSLGNFLTIREMLEKYHPEVLRLFILAAQYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEF 373
PL+Y+ +++A ++ Y T + +E + + A+D K L +EF
Sbjct: 301 PLDYTEANINNARQSLIRWYTTTDRIQ------KECRHLEKTDDGAKDLEKKVLGLMNEF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + TG D ++ N L+ K P+ ++ E+ K + EVL
Sbjct: 355 QEAMDDDFNTAKV-TGILFDLVREWNRVLDT-KLAVPQ----AVCEAFFKNVARISEVLG 408
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+ G P + L K + ++ ++ + I +R ARKNKD+ K+D IR +L
Sbjct: 409 LFGAKP----EDFLNDDKKLQFQSVKIDAAEIEKSIADRNMARKNKDWVKADLIRKELKE 464
Query: 494 KGIALMD 500
G+ + D
Sbjct: 465 HGVEIKD 471
>gi|406980236|gb|EKE01868.1| hypothetical protein ACD_21C00032G0011 [uncultured bacterium]
Length = 459
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 292/490 (59%), Gaps = 36/490 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN+ ++QKELF PI KVG+YVCG+T YD H+GH R + FD++ RYL + +V
Sbjct: 2 LHIYNTFSRQKELFKPISTPKVGLYVCGLTVYDNCHIGHGRLFIWFDVVVRYLRSVGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA +L + +L+ R D L +PP ++PRV++H+ QI
Sbjct: 62 TYVRNITDIDDKIIKRAQELNIDYQTLTQRMIDSMHTDEKSLDVIPPDFEPRVTEHIPQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I +IN D AYV + GDV++ V K YG+L+ Q L + R G RV KR+P DF
Sbjct: 122 VDLIQTLINKDFAYVTKTGDVYYEVAKFKAYGKLAHQDLNSLRTGIRVETSEDKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W SPWG GRPGWHIECSAM+ YL FDIHGGG DL FPHH+NE+AQ
Sbjct: 182 VLWKAAKPNEPFWPSPWGNGRPGWHIECSAMAKKYLGENFDIHGGGNDLQFPHHQNELAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V N EKMSKSLGNFF +++ ++YHP LR+F++++HY+SP
Sbjct: 242 SEAANGCCFVNYWMHMGFVQVNQEKMSKSLGNFFVLKEALKKYHPEILRYFVVASHYQSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L++A A+ Y TL+D +A N D N+ FHA M
Sbjct: 302 INFSENNLENAHAALQRFYITLRDLPIA-------------NTKDFDPKNQFNKRFHAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F D + IN N QLSL + +K + ILG
Sbjct: 349 DDDFNTPEALAVLF-DLAREINRLRN--------ADQLSLAAQHGAL---LKHLGWILG- 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+LQ +K LK A + E + LI R AARK+K+++++D+IR +LT I
Sbjct: 396 --------ILQDDPEKFLK-AGIDENKIQSLINARNAARKDKNWAEADRIRGELTAMRIT 446
Query: 498 LMDMGKETIW 507
L D T W
Sbjct: 447 LEDTPNGTTW 456
>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
16795]
gi|164604516|gb|EDQ97981.1| cysteine--tRNA ligase [Clostridium bartlettii DSM 16795]
Length = 474
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/492 (41%), Positives = 298/492 (60%), Gaps = 26/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +K+YN+++++KE F PI GKV MYVCG T Y+ H+G+AR + FD L RYLE+
Sbjct: 7 IVVKLYNTLSRKKEEFKPIEEGKVKMYVCGPTVYNFIHIGNARPFIIFDTLRRYLEYRGY 66
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTDVDDKII+R+++ P ++ +Y +EY VD L + P+V+D++E
Sbjct: 67 DVTFVQNFTDVDDKIIKRSHEENITPEEVATKYIKEYFVDADGLGIKRASVHPQVTDNIE 126
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI + ++ + AY V GDV+F +K +YG+LSG + E AG R+ V+ +KR+P D
Sbjct: 127 QIIAFVKELEDKGYAYAVNGDVYFDTKKFKDYGKLSGIKQEELEAGARIEVNDQKRHPMD 186
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP W SPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIA
Sbjct: 187 FVLWKAKKEGEPGWASPWGEGRPGWHIECSVMSNRYLGETIDIHAGGQDLKFPHHENEIA 246
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YW+HN ++ NNEKMSKSLGNFFT+R+I+E Y +R F++S HYR+
Sbjct: 247 QSEARSGKNFSNYWLHNEYINVNNEKMSKSLGNFFTVREISEIYDLEVVRLFMLSTHYRN 306
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ + + +Y + E ++ E K +D + R +F
Sbjct: 307 PINFSDEILNQSKAGLERLYNAKEKAEFTINNL-EDSKMTEEEAKLQDELASFRQKFIDA 365
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD+NT+ ++ F+ A KF+NS++ K+ Q+ L NE+ VL I+
Sbjct: 366 MDDDVNTADAVSAIFELA-KFMNSNITENSSKEFAQKALDEF-------NELTGVLNIVN 417
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
KD K+ ++ +E++ +LIE+R A+KNK+F +D+IR L KGI
Sbjct: 418 --------------KD---KKEDILDEEIEKLIEQRTEAKKNKNFQLADEIRQQLLDKGI 460
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 461 VLEDTRQGVKWK 472
>gi|383457378|ref|YP_005371367.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
gi|380732503|gb|AFE08505.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
Length = 489
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/498 (43%), Positives = 299/498 (60%), Gaps = 26/498 (5%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+++++N+M+ QKE P+VPG+V +YVCG T Y H+G+AR SFD++ RYL + +
Sbjct: 5 SIRLFNTMSMQKEPLEPLVPGEVKVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGFK 64
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN+TDVDDKII+ A++ GE P+ L++R+ + + D L P PRVS+ + +
Sbjct: 65 VTYVRNYTDVDDKIIKAAHETGEAPVDLASRFVEAFREDARALHLREPDVSPRVSETIPE 124
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I +++ AY +GDV+FAV+K +Y +LS + L++ GERV KR P DF
Sbjct: 125 IVAIIQTLVDKGYAYEAKGDVYFAVDKDEDYAKLSKRNLDDLCQGERVQPGDLKRQPLDF 184
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWG GRPGWHIECSAMS +L FDIHGG +DLIFPHHENEIAQ
Sbjct: 185 ALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSEKFLGRTFDIHGGALDLIFPHHENEIAQ 244
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A + YWMH G + KMSKSLGN +R + ALR F +S HYR P
Sbjct: 245 SESATGQTMAKYWMHCGFLDLEGAKMSKSLGNVVRLRDALAKVDAEALRFFFLSTHYRHP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDE 372
LN+ L A + Y Y+TL+ D VA F + HG+ AR E
Sbjct: 305 LNFGEKALQDAEGRMEYFYETLRKVDERVAGKDFGKGPLHGEPAR-----------FLTE 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F + M DD NT+ L GA F+N L K P + + + +L+ + +V+E
Sbjct: 354 FESAMDDDFNTAGAL-GALSGLFGFMNE----LTDKPPVKDKPLVGRTLQALREQVRETS 408
Query: 433 RILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
R+LGL PGA+ L + +D+A++ + +V +L+ ER AAR KDF+K+DQ+R
Sbjct: 409 RVLGLFEDDPGAW---LLRRRDRAVRERGIDVAEVERLLAERTAARAAKDFAKADQVRGA 465
Query: 491 LTRKGIALMDMGKETIWR 508
L G+ +MD T W+
Sbjct: 466 LKTLGVDIMDTPAGTSWK 483
>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 470
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 287/495 (57%), Gaps = 46/495 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N+++++KE F PI G++GMYVCGVT YDL H+GHAR V+FD++ RYL + +V
Sbjct: 15 LQIHNTISRKKEEFKPINEGQIGMYVCGVTVYDLCHIGHARTFVNFDMVVRYLRYRGYKV 74
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII+RA++ + L+ + E D L + P +PR ++ + +I
Sbjct: 75 RYIRNITDIDDKIIKRAHERKVSAKELAENFIVEMHKDFDALNIMRPDEEPRATETIPEI 134
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+N AYV + GDV FA++ YGRLSGQ LE AG R+ ++ KRNP DF
Sbjct: 135 IALVQRLIDNGNAYVADNGDVMFAIDTFKQYGRLSGQNLEELEAGARIEIEKTKRNPFDF 194
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQ
Sbjct: 195 VLWKMSKPGEPSWSSPWGDGRPGWHIECSAMNLKYLGENFDIHGGGSDLIFPHHENEIAQ 254
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC AC V+YWMH+G V N+EKMSKSL NFFTIR + E Y +R FL+SA YRSP
Sbjct: 255 SCCACHSKYVNYWMHSGMVMINHEKMSKSLNNFFTIRDVLEHYDAETIRFFLLSAQYRSP 314
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ LD A ++ +Y L+D + P + G ED K F M
Sbjct: 315 LNYTQENLDKAKASLARLYTALRD----VVPVKAEG---------EDEYTK---RFKELM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D K +N E+ K+ + E+ +LG
Sbjct: 359 DDDFNTPGAMAVLF-DLAKAVNKEEG---------------ETKAKLAGRLVELGSVLG- 401
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEED----VLQLIEERAAARKNKDFSKSDQIRADLTR 493
+L Q LK AE ++ D + LI+ER AR KDF +D R LT
Sbjct: 402 --------ILYQNPSSFLKGAESSDNDEVSVIEALIQERKDARARKDFKAADAARDKLTA 453
Query: 494 KGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 MGIVLEDGPSGTTWR 468
>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 485
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/490 (45%), Positives = 289/490 (58%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+M + KE F+P+ P KV MYVCG+TAYDL H+GHAR++V FD+L RYL HL +V
Sbjct: 1 MQLFNTMARAKEPFSPLHPCKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII++A G ++ RY + DM L L +PR ++++ +
Sbjct: 61 TFVRNFTDVDDKIIKKAASEGATCAGIAERYIAAFYEDMDKLGILRADAEPRATEYVAAM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM ++I AY GDV+F V +YG+LSG+ +E+ RAG RVA K +P DF
Sbjct: 121 ADMAERLIETGHAYRTPSGDVYFRVRSFADYGKLSGRDIEDMRAGARVAPGDEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKA+K GEP W+SP+GPGRPGWH+ECS MS L FDIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKASKPGEPVWESPFGPGRPGWHLECSVMSEKLLGIPFDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V N EKMSKSLGNF TIR I +RY P LR FL+++HYRSP
Sbjct: 241 SEAATGKEFCRFWVHNGFVRINTEKMSKSLGNFITIRDIYKRYLPEVLRFFLVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A + +Y E AL+ + G A E + + F A M
Sbjct: 301 LDYSDQALDEAEKGIKRLYAAKGQMEQALTRAKWSGTKLPAEIAEE--LARHEQGFIAAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ L F A++ L K K + + I LR+I + + ILG+
Sbjct: 359 DDDCNTAQALGHVFG-AVRLAGRLLE--DKTLAKSAETADI--LRRILADFETWSGILGV 413
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ E L LK R + V L+ ER ARK KDF +SD IR +L G+
Sbjct: 414 CGRDS-REFLDALKACRAARLGIDPTRVDALVAERQDARKAKDFPRSDAIRDELATLGVT 472
Query: 498 LMDMGKETIW 507
+MD W
Sbjct: 473 VMDTPTGPQW 482
>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 465
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/487 (42%), Positives = 293/487 (60%), Gaps = 28/487 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+++Q KE F P+ KV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTD++DK+I RAN G L+ R+ +EY D L T PR ++ + +
Sbjct: 61 IYIQNFTDIEDKMINRANKEGITVFELAERFIKEYYKDADRLNVKRATKNPRATEEIPDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IVLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELVAGARVDLSEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWFSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWIHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY ++ E + Q ++ N + I +L+ +F M
Sbjct: 301 NFSLDLIEQAEVALKRIYTCYENLEFLI---QNETSSSENNDKLKTVIEQLKAKFIEAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K E+L ++ +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANFCSK-----------ETLTFAKDVLKELCSILGIL 405
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
YS + E +++L ++E+R ARK K+F+++D+IR +L G +
Sbjct: 406 E--QYS-----------SKEEYVPQEILDMVEKRNQARKLKNFAEADRIRDELKSLGYIV 452
Query: 499 MDMGKET 505
+D + T
Sbjct: 453 LDTPQGT 459
>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
gi|384359372|ref|YP_006197224.1| cysteinyl-tRNA synthetase [Clostridium difficile BI1]
Length = 465
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 298/490 (60%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII R+++ G +P ++ +Y +EY VD L T P+V+D+++QI
Sbjct: 61 TYVQNFTDVDDKIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF
Sbjct: 121 IEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+
Sbjct: 241 EARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ A + +Y T + E LS E T + ++ ++ R +F M
Sbjct: 301 NFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD+NT+ ++ F+ A K INS+++ + S +E +K +E E+ +L
Sbjct: 360 DDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN-- 406
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
++ + KD L ++D+ +LI++R A+KNK+F +D IR L GI L
Sbjct: 407 -------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVL 453
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 454 EDTRQGVKWK 463
>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
Length = 456
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/494 (44%), Positives = 293/494 (59%), Gaps = 45/494 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+ ++K+ F PIV GKV MYVCG+T YD HLGHAR V FD++ R+L +V
Sbjct: 2 LKIYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE+ +L++R+ D A L + P +P+ ++H+ +
Sbjct: 62 TYVRNITDIDDKIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHITGM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI +I AY + GDVF++V YG+LSG+ LE+ RAGERV +D KR+P DF
Sbjct: 122 LDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSWDSPWG GRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMHNG + ++EKMSKSLGNFFTIRQ+ E+Y +R F++ A YRSP
Sbjct: 242 SEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFILRAQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ---EHGKTARINPAAEDCINKLRDEFH 374
LNYS LD A A+ +Y L+ +AL F + + AR F
Sbjct: 302 LNYSDHHLDDARQALTRLYTALRG--LALPTFTIDWQQPQAAR---------------FK 344
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NTS F+ + S +N +L L ++ +
Sbjct: 345 AAMDDDFNTSEAFAVLFE-----LASEVNRTASLADAALLKALAGLLGLLQRD------- 392
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
E Q + A R + +++ Q I+ R AR++K+F+++D+IR L +
Sbjct: 393 ---------PETFLQGGESAQGR---SADEIEQFIQLRLQARQSKNFAEADRIRKQLADE 440
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 441 GILLEDSPQGTSWR 454
>gi|345021352|ref|ZP_08784965.1| cysteinyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
Length = 466
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/497 (43%), Positives = 291/497 (58%), Gaps = 38/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++ IYN++T+ K+ F PI GKV MYVCG T Y+ H+G+AR A+ FD + RYLE+
Sbjct: 1 MSITIYNTLTRDKQEFKPIEDGKVRMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YV NFTDVDDKII+RAN+LGE+ ++SNRY YL D+ L TY PRV+D M+
Sbjct: 61 HVDYVLNFTDVDDKIIKRANELGEDVFAVSNRYIDAYLEDVEKLGVKKATYNPRVTDTMQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I+ ++ AY EGDV+F YG+LS Q ++ R+G R+ V +K +P D
Sbjct: 121 DIIVFISNLVEKGYAYEAEGDVYFKPRAFEEYGKLSHQSIDELRSGARIQVGEKKDDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGLGRPGWHIECSAMAKKYLGDTIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YWMHNG++ NNEKMSKSLGNF R + E++ P +R F++S YR
Sbjct: 241 QSEANNGKTFANYWMHNGYININNEKMSKSLGNFVLTRDLLEKHDPDVIRFFMLSVQYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRD 371
P+N+S L+SA +++ I Q+ H K++ N I+ LR
Sbjct: 301 PINFSEELLESAKNSLERIKTAYQNL--------GHRKSSSTNLDDNTTEWLEKISALRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
+F M DD NT++ ++ F D K N LN K +IE+ +N +K
Sbjct: 353 KFETEMDDDFNTANAISVLF-DLTKEANVYLN------EKHTSPEVIEAF---QNLLKSF 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
L ILG+ G S L +E++ LIEER ARK ++F+++D+IR L
Sbjct: 403 LEILGIKLEGNVS---------------LLDEEIETLIEERNEARKTRNFARADEIRDLL 447
Query: 492 TRKGIALMDMGKETIWR 508
K I L D + W+
Sbjct: 448 KEKNIILEDTPQGVRWK 464
>gi|381196562|ref|ZP_09903904.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 473
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 304/491 (61%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P V G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE+ L++R+ Q D +L CL P PR +D+++Q++
Sbjct: 66 VRNITDIDDKIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQS 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + + Q +G T +++ E L + F++ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQ------QAYGDT-QVDTLDE----TLLERFNSAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K+Q +Q +LR + N ILGL
Sbjct: 355 RDDFNTAEAIAVLFE-----VNKELNRAVKEQQTEQAAIYYATLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L+EE + LI++R A+K K+F+K+D+IR L +G+
Sbjct: 403 VQHNVEEFLKSDIGQEALA---LSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|423202014|ref|ZP_17188593.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404615625|gb|EKB12587.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
Length = 458
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 295/493 (59%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+E+I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHFDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D VA + E + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPVAAAAGGEE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K + +++ +L ++E+ +LG
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAALGA---RLRELGAVLG- 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ + LK E EE ++ +LI ER AR +K+++ +D R LT G
Sbjct: 392 --------ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSAGKTSWR 456
>gi|409405694|ref|ZP_11254156.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
gi|386434243|gb|EIJ47068.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
Length = 463
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/502 (45%), Positives = 299/502 (59%), Gaps = 56/502 (11%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F+PI PGKV +YVCG+T YD H+GHAR V FD++ R+L V
Sbjct: 4 LKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRACGYAV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+NR+ D A L P ++PR + ++ ++
Sbjct: 64 TYVRNITDIDDKIIHRAAENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATKYVPKM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I ++ N AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P DF
Sbjct: 124 LDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLDF 183
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAK EP WDSPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKAAKPSEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P LR F++ AHY
Sbjct: 244 IAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+D + P A L DE H
Sbjct: 304 RSPLNYSDAHLDDARQALTRLYTALKD----------------VPPEAGGL---LADESH 344
Query: 375 AR-----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
A+ ++DD NT ++ F+ + + +N + + P Q + ++K
Sbjct: 345 AQRFTEALNDDFNTPMAVSVLFE-----LANEVN--RDRSPVQAR------------QLK 385
Query: 430 EVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
+ ILGLL P Y LK L + ++ LIE R AA+ KDF+++D++
Sbjct: 386 ALAGILGLLQRAPDEY------LKGGVAAADGLGQAEIEALIEARKAAKAGKDFAEADRL 439
Query: 488 RADLTRKGIALMDM-GKETIWR 508
RA LT GI L D G T WR
Sbjct: 440 RAVLTEAGIILEDKPGGLTEWR 461
>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|187629854|sp|A5WEW9.1|SYC_PSYWF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 505
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/492 (43%), Positives = 297/492 (60%), Gaps = 15/492 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIY+SMT K F P+ GK+GMYVCG+T YD H+GHAR V+FD++ R+L HL EV
Sbjct: 25 LKIYDSMTTNKRSFEPLQAGKIGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGYEV 84
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RAN+ GE L++R+ + D A L C P +PR ++H++++
Sbjct: 85 NYVRNITDIDDKIIARANENGEPIGELTHRFIKAMHEDAAALGCENPDAEPRATEHIDEM 144
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI + AY GDV++AV+ YG+LS ++LE+ +AG RV VD+ K+NP DF
Sbjct: 145 LDMIGTLEQKQHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFDF 204
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP W S WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 205 VLWKAAKAGEPQWASSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFPHHENEIAQ 264
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + WMH G + + EKMSKSLGNFFTIR++ +++HP +R F++S+HYRS
Sbjct: 265 SEAATGCTYAHNWMHVGFINVDGEKMSKSLGNFFTIREVMQKFHPETIRFFILSSHYRSQ 324
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A + IYQ L+ + L+ ++ I + +F A M
Sbjct: 325 VNFSDAALKEAHSGLTRIYQALKAADAVLNTSVSAAES--IESINAEHAGTHSADFIAAM 382
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT ++ F + +N L + + ++ + +L I G
Sbjct: 383 NDDFNTPQAISVLFS-----LAKEVNKLARDADDADTQAQLQLQAVQLRALAGILNI-GQ 436
Query: 438 LPPGAYSEVLQ-QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L P +E LQ Q+ + A ++++E + LI+ER ++ NK+F+++D+IR L GI
Sbjct: 437 LNP---AEFLQAQIGEVA--EDQMSDEQIEALIQERLDSKANKNFARADEIRDLLQNSGI 491
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 492 ELEDGKLGTTWR 503
>gi|381151336|ref|ZP_09863205.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
gi|380883308|gb|EIC29185.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
Length = 477
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/503 (44%), Positives = 297/503 (59%), Gaps = 42/503 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T++KE F P + GKVGMYVCG+T YD H+GHAR V FD + RY HL ++
Sbjct: 2 LKIYNTLTRRKETFKPRIEGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ GE+ L+ R+ D L LPP +PR + + I
Sbjct: 62 TYVRNITDIDDKIIQRANENGEDFNRLTARFIDAMHEDERALAVLPPDIEPRATQSIASI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++ AY+ GDVF+AVEK +YG+LSG++LE +AGERV VD+ K+NP DF
Sbjct: 122 IAMIEALLAKGYAYIGSSGDVFYAVEKFRDYGKLSGKKLEELQAGERVDVDAAKQNPFDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EPSW +PWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKMAKANEPSWPAPWGDGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R++ ++Y P +R F++S+HYRSP
Sbjct: 242 SEGATGEKFVNLWMHNGFVRVNEEKMSKSLGNFFTVREVLKQYRPEIIRFFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS QL+ ++ A+ +Y + G TA P D R F M
Sbjct: 302 LNYSDEQLNESATALNRLYTA------------QRGVTAPDAPILPD----YRGRFEQAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT ++ F + LN K K +E + +K++ +LG+
Sbjct: 346 NDDFNTPVAVSVLFD-----LARELNKAKTKD--------VEQAGQFAASLKQLGGLLGI 392
Query: 438 --------LPPGAY-SEVLQQLKDKALKRAELTEEDVL--QLIEERAAARKNKDFSKSDQ 486
L GA+ S V + A++ DV + I+ R A+K K ++ +DQ
Sbjct: 393 LQDDPEAWLKSGAFHSAVYESATAGDWVSADVMRGDVWIERQIQARLDAKKAKSWALADQ 452
Query: 487 IRADLTRKGIALMDMGKETI-WR 508
IR L +GI L D T WR
Sbjct: 453 IRNQLKEQGIILEDAPNGTTNWR 475
>gi|312621501|ref|YP_004023114.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
gi|312201968|gb|ADQ45295.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
Length = 465
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/488 (43%), Positives = 295/488 (60%), Gaps = 30/488 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDV+DK+I RAN G L+ R+ QEY D L T PR ++ +E +
Sbjct: 61 IYIQNFTDVEDKMINRANKEGVTVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I +I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 IALIQTLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A+ +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EASTGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-EDCINKLRDEFHARM 377
N+S+ ++ A A+ IY ++ E + ++G T+ + + + + +L+ +F M
Sbjct: 301 NFSIDLIEQAESALKRIYTCYENLEYLI----KNGTTSNSSDSTLKAVLKELKAKFIDAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ TG + ++ IN+ N K + L + +KE+ ILG+
Sbjct: 357 EDDLNTAEA-TGYLFEMVREINTHSNTCSK-----------DVLILARDTLKELCSILGI 404
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L Y E K+ E+ E +L+L+E+R ARK K+F ++D+IR DL G
Sbjct: 405 LE--QYEE----------KKDEIPPE-ILELVEKRNEARKAKNFLEADRIRDDLRSLGYI 451
Query: 498 LMDMGKET 505
++D + T
Sbjct: 452 VLDTPQGT 459
>gi|385331930|ref|YP_005885881.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
Length = 462
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/494 (45%), Positives = 302/494 (61%), Gaps = 39/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++TQQKE F PI PGKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 2 IRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L++R + D A L L P +PR + ++++I
Sbjct: 62 NYVRNITDIDDKILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY + GDV+FAV+ +YG+LS ++LE+ AG RV V KR+PADF
Sbjct: 122 IAMIHKLIAGGHAYAADNGDVYFAVDSFDDYGKLSKKKLEDLLAGARVDVQEAKRSPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAKAGE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGETFDIHGGGPDLLFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS
Sbjct: 242 SECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRYFLVSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A + +Y L+ + P K A + + D + F M
Sbjct: 302 VDYSEENLAEAGRTLTRLYHALR----GIVP----AKAADVPESEHD------ERFAEAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ A+ +++ N + + + + E++ K+ IL
Sbjct: 348 DDDFNTA--------GAIAVLHAVANEINQHRRDGR-----------EDDAKQSAAILVR 388
Query: 438 LPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
L G +LQQ + +A EL+ ED+ +I+ RA ARK K+F+++D+IR +L K
Sbjct: 389 L--GGVLGLLQQDPEAFFQADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEK 446
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 447 GIILDDSREGTTWR 460
>gi|374335348|ref|YP_005092035.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372985035|gb|AEY01285.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 459
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/494 (45%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F P+VPGKVGMYVCGVT YDL H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNSLTRQKEEFKPLVPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVTRYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ +L+ R E D L P +P+ + H+ +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDALTERLTAEMYRDFDALNIARPDIEPKATGHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I + AYV + GDV F V +YGRLSGQ LE +AG RV V+ KRNP DF
Sbjct: 122 IAMVDTLIKDGHAYVADNGDVLFEVNSFADYGRLSGQNLEQLQAGARVEVEQSKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSWDSPWGPGRPGWHIECSAM+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQSKPGEPSWDSPWGPGRPGWHIECSAMNGKHLGKHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCANHSPYVNTWMHSGMVMVDQEKMSKSLGNFFTIRDVLKHYDGETIRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS L A A+ +Y L+D EVA + ED + + F A
Sbjct: 302 LNYSDENLKQARTALERLYTALRDLPEVAAA-------------GGEDFVAR----FTAA 344
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F + +N K K + + ++E+ +LG
Sbjct: 345 MDDDFNTPEAYSVLFD-----LAREINRQKGKDDA--------AAAGLGGRLRELAGVLG 391
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LL P A+ L+ A E+ D+ +LI+ R AR+NKD++ +D R LT
Sbjct: 392 LLTQEPEAF------LRGDAGADDEVA--DIERLIQARLDARQNKDWAAADAARDQLTAM 443
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 444 GIVLEDGPEGTRWR 457
>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 473
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 304/491 (61%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P V G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII+RAN+ GE+ L++R+ Q D +L CL P PR +D+++Q++
Sbjct: 66 VRNITDIDDKIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQS 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKDNEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + + Q +G T +++ E L + F++ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQ------QAYGDT-QVDTLDE----TLLERFNSAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K+Q +Q +LR + N ILGL
Sbjct: 355 RDDFNTAEAIAVLFE-----VNKELNRAVKEQQAEQAAIYYATLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L+EE + LI++R A+K K+F+K+D+IR L +G+
Sbjct: 403 VQHNVEEFLKSDIGQEALA---LSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|417954102|ref|ZP_12597142.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342816142|gb|EGU51047.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 460
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/491 (44%), Positives = 293/491 (59%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++++++I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I AYV + GDV F + K YG+LSGQ LE +AG RV ++S KR+ DF
Sbjct: 122 IELVETLIERGFAYVADNGDVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y +L+ ++ +S AR N A M
Sbjct: 302 LNYSEDNLNQARSALERLYTSLRGLDLTVSAVGGEEYVARFNDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D + IN + K + ++ SL ++ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREIN---------RLKAEDVAAASSLGVTMRQLADVIGILHQ 396
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P LK A E+ E + LI+ R +R +KD++ +D R LT GI
Sbjct: 397 DPEAF-------LKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIV 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGPEGTTWR 458
>gi|410658554|ref|YP_006910925.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|410661541|ref|YP_006913912.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
gi|409020909|gb|AFV02940.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|409023897|gb|AFV05927.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
Length = 487
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/503 (43%), Positives = 301/503 (59%), Gaps = 31/503 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN++T++KE F P PGK MY CG T Y+ HLG+AR V FD++ RYL H
Sbjct: 1 MAIRLYNTLTRRKEAFVPREPGKASMYACGPTTYNYFHLGNARMLVVFDMVRRYLIHKGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYV+NFTDVDDKII RA + G +P++L+ +Y EY D L LP P+ ++H+
Sbjct: 61 VVTYVQNFTDVDDKIINRAAEEGCDPIALAGKYINEYFTDAKALNILPADIHPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+I ++ AY ++GDV+FAV+K P YG+LSG+ LE+ +AG RV VD +K NP D
Sbjct: 121 EMIDIIRRLEEKGLAYNIDGDVYFAVDKFPGYGKLSGRTLEDMQAGARVEVDDKKHNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AKAGEP W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKAKAGEPFWESPWGKGRPGWHIECSAMSLKYLGPGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + + YWMHN +T N EKMSKSLGNFF +R +T ++ +R +L+ HYR
Sbjct: 241 QSEGCLEGQQFARYWMHNAFITINQEKMSKSLGNFFLVRDVTGKFPGDVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARI----------NPAAED 364
SPL++ +L AS + + +++ + AL Q + G T I N A+
Sbjct: 301 SPLDFDDEKLVMASKGLDRLKNSVRLAKEALGKAQGKEGMTFGIIAVNRDLKTDNEMAQA 360
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
C+ + R+ F M DD N++ F+ A K IN+ L + ESL +
Sbjct: 361 CL-EARNAFEQAMDDDFNSAQAYAALFELA-KGINTYL---------AKGSIETESLTEA 409
Query: 425 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
+ E+ ILG A +E+LQ+ K + EL ++E RA AR+NKD++ +
Sbjct: 410 AQTLIELAGILG-FDLEAEAEMLQEDSGKLAQVMEL-------VMEIRANARRNKDWTTA 461
Query: 485 DQIRADLTRKGIALMDMGKETIW 507
D IR + GI + D + W
Sbjct: 462 DLIRDRIKEIGIVIEDTPEGARW 484
>gi|373454259|ref|ZP_09546131.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
gi|371935992|gb|EHO63729.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
Length = 481
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 296/499 (59%), Gaps = 34/499 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE+F PI PG+ +YVCGVT Y+ H+G+AR AV++D++ RYLE++ +V
Sbjct: 4 IKVYNTLTKEKEVFKPITPGEAKIYVCGVTPYNHPHIGNARPAVTWDVIRRYLEYVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII +AN G + ++S+RY Y M L PRVS+HM+ I
Sbjct: 64 EFVQNFTDVDDKIINKANAEGTDWKTISDRYIDAYFQVMDALHVRRADVYPRVSEHMDDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ +I AYV+ GDV++ + +YGRLSG+++E+ AG R+ V+ KRNP DFA
Sbjct: 124 IHMVETLIQKGHAYVLGGDVYYDISTFKDYGRLSGRKIEDMLAGARIEVNDEKRNPGDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGKGRPGWHIECSAMSIHYLGKTFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C C V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRS
Sbjct: 244 EGCTGCH--FVDYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
PL++S +L+ A + L+D V +E + + A E FH
Sbjct: 302 PLDFSDDRLEEAEKNM----DKLKDVIGRVKELSGREGSEVTEASKALEKAAEDDMKVFH 357
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT + TGA + K IN N + + SL K K +L I
Sbjct: 358 EAMDDDFNTG-LATGAMFELAKAINVYYNDVHSGIGFNKA-----SLEKAGKAFKTILDI 411
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEE----DVLQLI-EERAAARKNKDFSKSDQIRA 489
LG+L +K K+ E ++ D++ +I R +ARK K + +D+IR
Sbjct: 412 LGIL-------------EKEWKKTEAYDDKDYNDLMNVILAVRQSARKAKQYQLADEIRD 458
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI + D W+
Sbjct: 459 KLGEIGIVIEDTPTGARWK 477
>gi|363893842|ref|ZP_09320936.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
gi|361963344|gb|EHL16422.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
Length = 466
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 303/492 (61%), Gaps = 32/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+M+ QKE F + GKV MY CG T Y+ H+G+AR + FD L YLE++ EV
Sbjct: 1 MKIYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII +AN+ G P+ L+++Y +EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFA
Sbjct: 121 IDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+
Sbjct: 241 EARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHA 375
NYS L+ A ++ + +++C+ L+ + KT E+ + + + F
Sbjct: 301 NYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M+DDLNT+ +T F D +KF N+++++ K QQ L ++ NE+ VL I
Sbjct: 357 KMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML-------NELTAVLNI- 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
DKA + ++ + + +LIE+R A+K+KDF+K+D+IR +L + G
Sbjct: 408 --------------AMDKADEDVDVAK--IEELIEQRNIAKKSKDFAKADEIRDELKQMG 451
Query: 496 IALMDMGKETIW 507
I + D + W
Sbjct: 452 IEIKDTRQGVQW 463
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19.1|SYC_PSYCK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/508 (42%), Positives = 303/508 (59%), Gaps = 31/508 (6%)
Query: 9 TVAAPKMDLT--LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDL 66
T+ P D L IY+S+T +K+ F P+ GKVGMYVCG+T YD H+GHAR V FD+
Sbjct: 2 TMTTPLADAMSQLVIYDSLTGRKQAFKPLATGKVGMYVCGMTVYDYCHIGHARVMVGFDM 61
Query: 67 LYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPT 126
R+L L +V YVRN TD+DDKII RA + GE +L+ R+ D L CL P
Sbjct: 62 AVRWLAQLGYDVNYVRNITDIDDKIITRAAENGEEIGTLTQRFITAMHEDATALGCLSPD 121
Query: 127 YQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERV 185
+PR +DH+++++ MI +++ND AY + GDV++AV+ +YG+LS + L++ +AG RV
Sbjct: 122 AEPRATDHIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRV 181
Query: 186 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 245
V++ KRNP DF LWKAAK EP W S WG GRPGWHIECSAMS L + FDIHGGG D
Sbjct: 182 EVENDKRNPFDFVLWKAAKPDEPQWASAWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHD 241
Query: 246 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
L FPHHENEIAQS AA WMH G + + EKMSKSLGNFFTIR + +Y P +
Sbjct: 242 LQFPHHENEIAQSEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETV 301
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT-----ARINP 360
R FL+S+HYRS +N+S LD + +++ +YQ L+ E Q+ GK A IN
Sbjct: 302 RFFLLSSHYRSQVNFSDSALDESHNSLSRLYQALKVAE------QQKGKVLIIDEALINN 355
Query: 361 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 420
A + + +F M+DD N+S ++ F + +N K Q +E+
Sbjct: 356 AYASAVGQ---DFIKAMNDDFNSSTAISVLFG-----LARDINKASKAQD-------VET 400
Query: 421 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 480
++ +K + + L +L + LQ + + + + LT+E + LI ERA A+ NK+
Sbjct: 401 AWQLAQHLKALAQTLNILQQ-PVQQFLQAVIGEVAEDS-LTDEAIDGLIIERADAKTNKN 458
Query: 481 FSKSDQIRADLTRKGIALMDMGKETIWR 508
F+++D+IR L GI L D T WR
Sbjct: 459 FARADEIRVQLKEAGIELEDSRAGTTWR 486
>gi|406676594|ref|ZP_11083780.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|404626817|gb|EKB23627.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 458
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 295/493 (59%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+E+I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D VA + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K + +++ +L ++E+ +LG
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAALGA---RLRELGAVLG- 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ + LK E EE ++ +LI ER AR +K+++ +D R LT G
Sbjct: 392 --------ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSTGKTSWR 456
>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 463
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/497 (44%), Positives = 300/497 (60%), Gaps = 44/497 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS+++QKE F PI GKV MYVCG+T YDL H+GHAR V FD++ RYL L V
Sbjct: 2 LKIHNSLSRQKETFKPITAGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE +L+ R+ E D L L P +P+ ++ M +I
Sbjct: 62 TYVRNITDIDDKIIKRAAENGETIQALTERFIAEMHQDADALGVLRPDLEPKATESMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I AY + GDV++ V K YG+LSG+++++ RAGER+AV+ K +P DF
Sbjct: 122 LAMVETLIGKGLAYKADNGDVYYDVSKFEAYGKLSGRQVDDLRAGERIAVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMSAH L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKEGEPAWESPWGMGRPGWHIECSAMSAHCLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A +V+YWMHNG V ++EKMSKSLGNFFT+R++ +Y A+R+F++S+HYRSP
Sbjct: 242 SEGAHDCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLAQYPAEAVRYFILSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD-EFHAR 376
LNY+ QL+ A A+ Y +L+D E P E +N D EF +R
Sbjct: 302 LNYAEDQLEQAKAALTRFYTSLRDVE----------------PQPE--LNWQDDKEFGSR 343
Query: 377 ----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
M DD NT+ L+ + + +LN + L L +
Sbjct: 344 FAEAMDDDFNTALALS-----VMADVRQALNKALENNEADLAAYLAGLLLSFGD------ 392
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADL 491
+LGL A + ++ + AE ++ D + LI ER AR +K++S++D IR L
Sbjct: 393 -VLGLFQQDAETFLVGDM-------AEDSDADAIDALIVERNQARADKNWSRADDIRDQL 444
Query: 492 TRKGIALMDMGKETIWR 508
+ GI + D +T WR
Sbjct: 445 SEMGIVIEDAAGKTSWR 461
>gi|397666931|ref|YP_006508468.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395130342|emb|CCD08580.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 295/496 (59%), Gaps = 51/496 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + PGK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFISLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ G + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWHSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT L+ FQ L + K +L +L+ + IL
Sbjct: 346 AMNDDFNTPVALSILFQ------------LAHEVNKSNSPALAHTLKNLAG-------IL 386
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLT 492
G L Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL
Sbjct: 387 GFL----------QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRADLL 436
Query: 493 RKGIALMDMGKETIWR 508
KGI L D T WR
Sbjct: 437 SKGIELEDGATGTTWR 452
>gi|392959715|ref|ZP_10325196.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421056356|ref|ZP_15519274.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421070069|ref|ZP_15531206.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392438194|gb|EIW16052.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392448807|gb|EIW25984.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392456099|gb|EIW32858.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
Length = 481
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/502 (43%), Positives = 304/502 (60%), Gaps = 33/502 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MT+QKE F P GKV MYVCGVT Y+ H+G+AR +++D++ RYLEH +
Sbjct: 1 MALKVYNTMTRQKEEFIPHEAGKVKMYVCGVTPYNHPHIGNARPFITWDVIKRYLEHCRY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +V+NFTDVDDKII+ AN G ++NRY Y M L P VSDHM
Sbjct: 61 EVFHVQNFTDVDDKIIKAANTEGVTWDVIANRYIASYFEVMDKLNIRRADIYPTVSDHMT 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +++ ++ AY+V+GDV+++VEK +YG+LSG+ +E+ +AG RV VD RK +P D
Sbjct: 121 EIINIVEGLVAKGYAYIVDGDVYYSVEKFNDYGKLSGRDIEDMKAGARVDVDERKHHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP+W+SPWG GRPGWHIEC+AMS YL + FD HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPAWESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
QS A ++S V YW+HNG +T N EKMSKSLGNFF ++ I E Y P LR F++S HY
Sbjct: 241 QSEAFVEESQPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLRFFVLSTHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAE--DCINKL 369
RSPL++S +L A ++L+ A+ + GK A N A E +
Sbjct: 301 RSPLDFSDERLSEAQ-------RSLERLRTAVENVLQLGKMPDAANENKADELVKVARQA 353
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML---KKKQPKQQQLSLIESLRKIEN 426
++F M DD NT+ ++ F A K IN N + K + + +L E+ + N
Sbjct: 354 EEDFCKAMDDDFNTALAISVMFGLA-KEINVYYNGVIAGKVQHTAKGYTALRETYFMMAN 412
Query: 427 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 486
I+G+ +Q+ K EL E+ + +IE R AR+NKD++ +D+
Sbjct: 413 -------IIGIF--------VQEQTGKVDDSQELVEQLMDIIIEIRQHARQNKDWATADK 457
Query: 487 IRADLTRKGIALMDMGKETIWR 508
+R L GI L D + W+
Sbjct: 458 VRDSLGAVGIVLEDSPQGVRWK 479
>gi|402838090|ref|ZP_10886604.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
gi|402273799|gb|EJU22990.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
Length = 466
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 303/492 (61%), Gaps = 32/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+M+ QKE F + GKV MY CG T Y+ H+G+AR + FD L YLE++ EV
Sbjct: 1 MKIYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII +AN+ G P+ L+++Y +EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFA
Sbjct: 121 IDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+
Sbjct: 241 EARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHA 375
NYS L+ A ++ + +++C+ L+ + KT E+ + + + F
Sbjct: 301 NYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M+DDLNT+ +T F D +KF N+++++ K QQ L ++ NE+ VL I
Sbjct: 357 KMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML-------NELTGVLNI- 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
DKA + ++ + + +LIE+R A+K+KDF+K+D+IR +L + G
Sbjct: 408 --------------AMDKADEDVDVAK--IEELIEQRNIAKKSKDFAKADEIRDELKQMG 451
Query: 496 IALMDMGKETIW 507
I + D + W
Sbjct: 452 IEIKDTRQGVQW 463
>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|384259159|ref|YP_005403093.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|380755135|gb|AFE59526.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 463
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/492 (44%), Positives = 291/492 (59%), Gaps = 34/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE ++L++R E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETFMALTDRMIAEMHADFASLNILPPDSEPRATQHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
D++ ++I+ D AYV GDV F VE P+YG LS Q L+ +AG RV V++ KRNP D
Sbjct: 122 IDIVQKLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+ WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS
Sbjct: 242 QSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS L A ++ +Y L+ + A +P R F A
Sbjct: 302 QLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAFVTR---------------FRAA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D + IN + K + LS L E++++ +LG
Sbjct: 347 MDDDFNTPEAYSVLF-DMARDIN---------RLKTEDLSAANGLAA---ELRQLAGVLG 393
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL + Q LK A + ++ LI++R AR +KD+ +D+ R L GI
Sbjct: 394 LLE----QDPEQFLKSGAQADNDDEVAEIEALIKQRNDARASKDWGMADKARDRLNEMGI 449
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 450 VLEDGAAGTTWR 461
>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|187631637|sp|A8H617.1|SYC_SHEPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 459
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/494 (45%), Positives = 287/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ PGKVGMYVCGVT YDL H+GH R VSFD++ RYL + +V
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RAN+ E+ SL+ R E D L P +PR + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRANENKESCDSLTERLIAEMHRDFDALNMARPDNEPRATLHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF
Sbjct: 122 IEMVEKLIEREHAYVASNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLGHYDATTVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A + IY L+D ++ T PA E +F + M
Sbjct: 302 LNYSEDNLKQAKSGLERIYTALKDLDL----------TVEAAPAEE-----FVAKFKSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K ++ +L ++ +VL ILG
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN---------RLKATDMAKASALGVALKQLADVLGILG- 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
Q D K E +++V + LI ER AR KD+ +D R L
Sbjct: 396 -----------QDVDTFFK-GEGNDDEVAEIEALIVERNRARAEKDWPAADVARDGLNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D + T WR
Sbjct: 444 GVILEDGPEGTTWR 457
>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|423209170|ref|ZP_17195724.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|404619015|gb|EKB15935.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
Length = 458
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 290/493 (58%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+E+I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D VA + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN +K + +L LR++
Sbjct: 346 DDDFNTPEAYSALF-DLVREINR-----QKAEDMVVAAALGARLREL------------- 386
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GA +LQQ + LK E EE ++ +LI ER AR +K+++ +D R LT G
Sbjct: 387 ---GAVLGILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSAGKTSWR 456
>gi|212703175|ref|ZP_03311303.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
gi|212673441|gb|EEB33924.1| cysteine--tRNA ligase [Desulfovibrio piger ATCC 29098]
Length = 483
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/494 (44%), Positives = 306/494 (61%), Gaps = 19/494 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P+ PGKV MYVCG+TAYD H+GHAR+A+ FD+L R+L L +V
Sbjct: 1 MQLYNTLTRKKEEFVPVRPGKVNMYVCGITAYDYCHIGHARSALVFDVLVRHLRALGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKIIRRAN+ + + Y + DM L + ++PR +++++Q+
Sbjct: 61 TFVRNFTDVDDKIIRRANEEKRDWREVGQTYIDAFHEDMDRLNVVRADHEPRATEYIQQM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+D+ +++I AY V GDV+F V P YG+LSG+ L+ +AG RVA K++P DF
Sbjct: 121 QDLCSELIAQGKAYAVPSGDVYFRVRAYPPYGKLSGRSLDELQAGARVAPGEEKQDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP W+SPWG GRPGWHIECSAMS YL DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPFWESPWGKGRPGWHIECSAMSKEYLP--LDIHGGGQDLIFPHHENEIAQ 238
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AAC +W+HNG V N EKMSKSLGNF TIR I Y P LR FL+ HYRSP
Sbjct: 239 TEAACSCQLARFWVHNGFVQVNAEKMSKSLGNFKTIRDILASYLPETLRFFLLGKHYRSP 298
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE----F 373
++++ +D + A+ IY+ C++ E K +++ A+ I K DE F
Sbjct: 299 IDFTADIMDESEKALQRIYE----CQLEAGKALERAKWKKVDLPAD--ILKEWDEHGQGF 352
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+A + DD+NT+ L F ++ +N L K + + L+E + N+ L
Sbjct: 353 NAALDDDVNTAQALGHIFSQ-VRLVNRVLED-KALRAGEGARRLLEEFFERHNDWSAQLG 410
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+ G P + L L+D+ R + V L++ERAAAR KDF++SD++RA L
Sbjct: 411 LFGQDP----ATFLLALRDQRAARLNIDVPRVQTLLDERAAARAAKDFARSDELRAALAE 466
Query: 494 KGIALMDMGKETIW 507
G+A+ D + +W
Sbjct: 467 LGVAVRDTVEGQVW 480
>gi|358450731|ref|ZP_09161184.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357225107|gb|EHJ03619.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 462
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 302/494 (61%), Gaps = 39/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++TQQKE F PI PGKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 2 IRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L++R + D A L L P +PR + ++++I
Sbjct: 62 NYVRNITDIDDKILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY + GDV+F+V+ +YG+LS ++LE+ AG RV V KR+PADF
Sbjct: 122 IAMIHKLIAGGHAYAADNGDVYFSVDSFDDYGKLSKKKLEDLLAGARVDVQEAKRSPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAKAGE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLLFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS
Sbjct: 242 SECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRYFLVSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A + +Y L+ + P K A + + D + F M
Sbjct: 302 VDYSEENLAEAGRTLTRLYHALR----GIVP----AKAADVPESEHD------ERFAEAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ A+ +++ N + + + + E++ K+ IL
Sbjct: 348 DDDFNTA--------GAIAVLHAVANEINQHRRDGR-----------EDDAKQSAAILVR 388
Query: 438 LPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
L G +LQQ + +A EL+ ED+ +I+ RA ARK K+F+++D+IR +L K
Sbjct: 389 L--GGVLGLLQQDPEAFFQADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEK 446
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 447 GIILDDSREGTTWR 460
>gi|333980492|ref|YP_004518437.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823973|gb|AEG16636.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 483
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/494 (44%), Positives = 300/494 (60%), Gaps = 18/494 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE F P PG+V MYVCG T Y+ HLG+AR V FD + RY ++ V
Sbjct: 1 MEIYNTLTRRKEKFIPRHPGRVDMYVCGPTTYNFIHLGNARPLVFFDTVRRYFQYRGYRV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII RA + G + L+L+ +Y EY D L P PRVS+H+ +I
Sbjct: 61 KYVQNFTDIDDKIINRAREEGVDALALARKYIDEYYRDAEALNVRPADVHPRVSEHLPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I+ +I AYVV+GDV+F + P YG+LSG+ LE +AG RV VD RK++P DFA
Sbjct: 121 IDLISTLIEKKAAYVVDGDVYFDISAFPEYGKLSGRTLEEMQAGARVEVDPRKKHPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP+WDSPWG GRPGWHIECSAM+ YL + FDIHGGG DL+FPHHENEIAQ+
Sbjct: 181 LWKAAKPGEPAWDSPWGKGRPGWHIECSAMALKYLGNNFDIHGGGFDLVFPHHENEIAQA 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA V YWMHNG +T N EKMSKSLGNFF +R+I +R+ P +R FL+S HYRSPL
Sbjct: 241 EAATGRPFVRYWMHNGFITVNQEKMSKSLGNFFLVREILDRFPPEVVRFFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRD---EFH 374
++ ++ +A + +++ AL P +E +I P E+ I L +F
Sbjct: 301 DFDDEKMAAAGRGLERFKNSIRLLTEALDRPSRE-----QIEPEDEEFIAALEKHHRDFV 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + G + + + +N+ L+ P + L L + NEV + R+
Sbjct: 356 AAMDDDFNTA-LAVGIWFELAREVNAYLHG-TAGSPCRAALEKAMDLFRSFNEVLGLFRV 413
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+L ++ + K L E + L+E R AR KD++ +D+IR L
Sbjct: 414 -----DERTGRIL--IEGRHAKSDGLEEALIELLLEVRQQARAKKDWATADRIRDRLKEL 466
Query: 495 GIALMDMGKETIWR 508
GI L D W+
Sbjct: 467 GIILEDTPGGVRWK 480
>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 485
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/504 (42%), Positives = 296/504 (58%), Gaps = 37/504 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++K+ F P V MYVCG+TAYDL H+GHAR++V FD+LYRYL H +V
Sbjct: 1 MRLYNTLARKKQEFVPENGNAVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T++RNFTD+DDKII RAN++G+ +++ ++ E+ VDM L L +P+ ++H+ ++
Sbjct: 61 TFIRNFTDIDDKIINRANEVGKEAAAIAEQFIGEFYVDMDRLGVLRADVEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I D AY GDV+F V YG+LSG+ ++ +G R+ K++P DF
Sbjct: 121 IALTARLIGQDHAYATPSGDVYFRVRSFAGYGKLSGRNIDELESGARIDPGEEKQDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW+SPWGPGRPGWH+ECSAMS Y DIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWESPWGPGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA ++W+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKPFANFWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVAL-------SPFQEHGKTARINPAAEDCINKLR 370
L++S L+ A + IY L + L SPF E TA + D I +
Sbjct: 301 LDFSFDALEEAEKGIRRIYAALAQADAELAKTSWKKSPFPEE-MTAEL-----DAIER-- 352
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK- 429
+ M DD+NT+ L F S L + + + L E R +K
Sbjct: 353 -HWAEAMEDDMNTAGALGHVF---------SAIRLAGRVTEDKTLRKAEGGRDFLLRIKA 402
Query: 430 ------EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
EVL I G P G L +L+D RA + V L++ R AR++KDF+K
Sbjct: 403 DMAAWSEVLGIFGRDPAG----FLAELRDNRAARAGIDPTRVQALLDARQQARQDKDFAK 458
Query: 484 SDQIRADLTRKGIALMDMGKETIW 507
SD IR +L + + D + W
Sbjct: 459 SDAIRDELAAMHVEVKDTPQGATW 482
>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
Length = 469
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/510 (44%), Positives = 297/510 (58%), Gaps = 64/510 (12%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ FTPIV GKV MYVCG+T YD HLGHAR V FD++ R+L V
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRSSGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ GE L+ R+ + D A L + P +P+ ++ ++ +
Sbjct: 62 TYVRNITDIDDKIIKRANENGETIGQLTQRFIEAMDEDSAKLGIIRPDIEPKATEFIDGM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI+ +I AYV GDVF++V YG+LSG+ LE+ RAGERV VD+ K++P DF
Sbjct: 122 IQMISALIEKGFAYVAANGDVFYSVNNFEGYGKLSGKSLEDLRAGERVEVDTHKKDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPW-----GPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
LWK+ K EPSWDSP+ G GRPGWHIECSAMS+H+L FDIHGGG DL FPHHE
Sbjct: 182 VLWKSVKPNEPSWDSPFGGPNGGKGRPGWHIECSAMSSHHLGEHFDIHGGGQDLQFPHHE 241
Query: 253 NEIAQSCAA-------CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
NEIAQS AA CQ V+YWMHNG V ++EKMSKSLGNFFTIR + E+Y +
Sbjct: 242 NEIAQSEAAHSHNGEPCQ--MVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEKYDAEVV 299
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD---CEVALSPFQEHGKTARINPAA 362
R F++ AHYRSPLNYS LD A A+ +Y +L+ +VA+ Q H +AR A
Sbjct: 300 RFFILRAHYRSPLNYSDQHLDDAKLALTRLYTSLRGHVVADVAIDWQQPH--SARFKEA- 356
Query: 363 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 422
M DD NT + F L + K + L + L+
Sbjct: 357 --------------MDDDFNTPEAMAVLFD------------LANEVNKTKSLEVAALLK 390
Query: 423 KIENEVKEVLRILGLLPPGA----YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 478
+ +LGLL A +V QL LK D+ QL+ +R A+K
Sbjct: 391 SLAG-------VLGLLQRDADAFLQGDVAAQLAGTELKI------DIDQLVIQRNEAKKT 437
Query: 479 KDFSKSDQIRADLTRKGIALMDMGKETIWR 508
K+F+++D+IR +L GI L D T WR
Sbjct: 438 KNFAEADRIRKELADAGIVLEDTALGTTWR 467
>gi|345872177|ref|ZP_08824115.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919258|gb|EGV30008.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 463
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 294/493 (59%), Gaps = 37/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T+QK++FTPI PGKV MYVCG+T YD HLGHAR V FD++YRYL L V
Sbjct: 2 LQIHNSLTRQKDVFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE L+ R+ Q D L LPP+ +PR + HM +I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGETFQELTERFIQAMREDGDALGVLPPSQEPRATGHMSEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +++ AYV + GDV++AV + YG+LSG+ ++ RAG RV + KR+P DF
Sbjct: 122 LAMVETLVDKGMAYVADNGDVYYAVGQFTGYGKLSGKDPQDLRAGARVEIGESKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP+W+SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSAKPGEPAWESPWGMGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R+I +RY +R+F++++HYRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYQAEEVRYFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L +A A+ +Y L+ F E R+ F A M
Sbjct: 302 LNYDDENLQNARGALTRLYTALRGLPEVEPAFGE----------------TYRERFSAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFIN--SSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
DD NT L F D ++ IN +M + + L E L ++ + + LR
Sbjct: 346 DDDFNTPVALAVLF-DLVREINRVRPTDMARAAALGAELRRLGEMLGILQGDAEVYLR-- 402
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G S L D ++ LI+ER AR ++D++ +D+IR +L G
Sbjct: 403 -----GGPSSTEDDLSDARIE----------ALIQERTQARADRDWAAADRIRKELADAG 447
Query: 496 IALMDMGKETIWR 508
+ L D + T WR
Sbjct: 448 VQLDDGPQGTTWR 460
>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
gi|109894889|sp|Q3A9P1.1|SYC_CARHZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 465
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 296/495 (59%), Gaps = 37/495 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+ KE F P PGKV MYVCG T Y+ H+G+AR V FD + RY E+ EV
Sbjct: 1 MKIYNTLTKTKEEFIPREPGKVYMYVCGPTTYNYIHIGNARPIVFFDTVRRYFEYKGFEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII RA + G +P+ L +Y EY D L T P+V++H+ +I
Sbjct: 61 IYVQNFTDIDDKIINRALEEGISPIELGQKYIIEYFKDADRLGVKRATVHPKVTEHIPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+M+ +I AY VEG+V+FAV+ +YG+LSG+ LE +AG RV VD +K+NP DFA
Sbjct: 121 IEMVKGLIEKGYAYEVEGNVYFAVDSFSDYGKLSGRDLEELKAGARVEVDEKKKNPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWGPGRPGWHIECSAMS YL FDIHGGG DL+FPHHENE+AQS
Sbjct: 181 LWKKAKPGEPYWESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGADLVFPHHENEVAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMHNG +T N EKMSKSLGNFF +R+I E++ +R FL+S HYRSPL
Sbjct: 241 EAFTGKPFARYWMHNGFITVNQEKMSKSLGNFFLVREILEKFPGRVVRFFLLSTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++ +L+ A A+ + +Q+ EV P + ARI E N LRD F+ M
Sbjct: 301 DFDDKKLNEAKAALERVDNFVQNLKEVNPLPGE-----ARIE-IQEKITNFLRD-FNEAM 353
Query: 378 SDDLNTSHILTGAFQDALKFINSSL---NMLK-KKQPKQQQLSLIESLRKIENEVKEVLR 433
DD NT+ + F+ ++F N+ + N+ K+ ++ L++ + IE V E +
Sbjct: 354 EDDFNTAQAMASLFE-LVRFGNTQIASGNLTAGDKKLFEEALNVYTQVFGIEFGVLEKIA 412
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+ P + E+ LIE RA +K K + +D IR +L +
Sbjct: 413 GEDITP---FVEL---------------------LIEVRARLKKEKKYDLADFIRDELKK 448
Query: 494 KGIALMDMGKETIWR 508
+GI L D K W+
Sbjct: 449 QGIILEDTPKGVRWK 463
>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 462
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/496 (44%), Positives = 303/496 (61%), Gaps = 43/496 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYNS+T+ KE+FTPI PGKV MYVCG+T YD H+GHAR +SFD++YR+L+ E
Sbjct: 3 SLQIYNSLTRSKEVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKATGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII RA + GE SL++R+ Q D L LPP ++PR ++++ +
Sbjct: 63 VTYVRNITDIDDKIINRAAENGEPISSLTSRFTQYMHEDTCALGILPPDHEPRATEYVPE 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ ++I ++ N AY +GDV ++V YG+LSG+ L++ RAGERV +++ KR+P D
Sbjct: 123 MLELIGKLEKNGLAYQSTDGDVNYSVRDFEGYGKLSGKSLDDLRAGERVDINTGKRDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AK EP W S WG GRPGWHIECSAMS+ L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKSAKPTEPEEAKWPSRWGTGRPGWHIECSAMSSKLLGEHFDIHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A V+YWMHNG V +NEKMSKSLGNFFTIR + + Y LR F+I +H
Sbjct: 243 EIAQSEGASHHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKSYDAEVLRFFIIRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS LD A +A+ +Y L+D +V A D ++ F
Sbjct: 303 YRSPLNYSDAHLDDAKNALTRLYTALKDVDV--------------KDQAVDWDSEYAKRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ M+DD NT + F+ A N + + L ++ +++K +
Sbjct: 349 ASAMNDDFNTPEAVAVLFELA--------NEVNRTH-----------LAELGSQLKALAG 389
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGLL + LQ D A+ E E+ + I+ R A+K K+F+++D+IR++L
Sbjct: 390 VLGLLERDP-RQFLQ--GDGAVDEGE--EKWIESQIQARIDAKKAKNFAEADKIRSELLE 444
Query: 494 KGIALMDM-GKETIWR 508
KGI L D G T WR
Sbjct: 445 KGIVLEDKPGGLTEWR 460
>gi|363891501|ref|ZP_09318680.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
gi|361965558|gb|EHL18540.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
Length = 466
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/492 (42%), Positives = 303/492 (61%), Gaps = 32/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+M+ QKE F + GKV MY CG T Y+ H+G+AR + FD L YLE++ EV
Sbjct: 1 MKIYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII +AN+ G P+ L+++Y +EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFA
Sbjct: 121 IDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+
Sbjct: 241 EARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCI--NKLRDEFHA 375
NYS L+ A +++ + +++C+ L+ + KT E+ + + + F
Sbjct: 301 NYSKDMLNQAKNSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVVYLQECKTNFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M+DDLNT+ +T F D +KF N+++++ K QQ L ++ NE+ VL I
Sbjct: 357 KMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML-------NELTGVLNI- 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
DK + ++ + + +LIE+R A+K+KDF+K+D+IR +L + G
Sbjct: 408 --------------AMDKTDEDVDVAK--IEELIEQRNIAKKSKDFAKADEIRDELKQMG 451
Query: 496 IALMDMGKETIW 507
I + D + W
Sbjct: 452 IEIKDTRQGVQW 463
>gi|338999452|ref|ZP_08638095.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
gi|338763601|gb|EGP18590.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
Length = 463
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 287/495 (57%), Gaps = 43/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T++KE FTP+V GKV MYVCG+T YD HLGHAR V+FD++ RYL + +V
Sbjct: 1 MHIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA + GE+ +L+ R Q D A L LPP+++PR + H+ I
Sbjct: 61 TYVRNITDIDDKILKRAEENGESISALTERMIQAMHEDEARLSVLPPSHEPRATGHIGDI 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I D AY GDV++ V K +YG+L+ ++L++ R+G RV VD K +P DF
Sbjct: 121 VAMIQTLIEKDFAYAAANGDVYYRVRKFADYGKLNNRQLDDMRSGARVEVDVHKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEAHWHSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R L+++HYRSP
Sbjct: 241 SEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEV-ALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
+NYSV L A ++ Y L+ EV + E G R A
Sbjct: 301 INYSVDSLHEARKSLTRFYTALEGVEVLSGGGGDETGYAERFTTA--------------- 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD N+ L F + LN K ES K ++ E+ R+ G
Sbjct: 346 MDDDFNSPEALAVLFD-----LARDLNRAKS-----------ESSEKAQHLASELTRLAG 389
Query: 437 LLPPGAYSEVLQQLKDKALK----RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+L +LQQ LK + L+E ++ I +R A+ NKDF+++D IR +L
Sbjct: 390 VLG------LLQQNPQTFLKGNQQQVALSEAEIEAKIAQRKEAKANKDFAQADAIRDELA 443
Query: 493 RKGIALMDMGKETIW 507
GI L D + T W
Sbjct: 444 SMGIILKDSREGTTW 458
>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|22257048|sp|Q8R7T3.1|SYC_THETN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 467
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 290/493 (58%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+MT+ KE F P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ V
Sbjct: 1 MRLYNTMTRTKEEFKPLKDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYTV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII RA + ++ R+ +EY D L T PR ++H++ I
Sbjct: 61 NYVQNFTDIDDKIINRAKEENTTEKEIAERFIEEYFKDADALGIKRATVHPRATEHIDDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ AYVV+G+V+F K +YG+LS + ++ AG RV +D +K+NP DFA
Sbjct: 121 IEFIKILIDKGYAYVVDGNVYFETAKFKDYGKLSHKNIDELMAGARVEIDEKKKNPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMH G++ NNEKMSKS GNFFT+R++TE+Y P LR F++ AHYRSP+
Sbjct: 241 EAAYDQPFSKYWMHIGYLNVNNEKMSKSKGNFFTVRELTEKYDPEVLRLFMLMAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S+ LD A A Y+ L + V L K ++ +D I K + +F
Sbjct: 301 NFSLDLLDQAKSA----YERLSNAVVNLKHLANITKDRELSDEEKDLIVKFDEYKKQFEE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ A K N++L+ K+ + L + L +L
Sbjct: 357 AMDDDFNTADAISVLFEMA-KTANANLSGNSSKKLVEYILEMFLKLSD----------VL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL A +E+ +E++L+LIEER ARK K++ +D+IR L +G
Sbjct: 406 GLSYKNAETEI--------------EDEEILRLIEERQKARKEKNWKLADEIRDKLKERG 451
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 452 IILEDTPEGVRWK 464
>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
Length = 470
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/494 (44%), Positives = 292/494 (59%), Gaps = 45/494 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK YNS+ ++K+ F PIV GKV MYVCG+T YD HLGHAR V FD++ R+L +V
Sbjct: 16 LKFYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYDV 75
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE+ +L++R+ D A L + P +P+ ++H+ +
Sbjct: 76 TYVRNITDIDDKIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHITGM 135
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI +I AY + GDVF++V YG+LSG+ LE+ RAGERV +D KR+P DF
Sbjct: 136 LDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRDPMDF 195
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEPSWDSPWG GRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQ
Sbjct: 196 VLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPHHENEIAQ 255
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMHNG + ++EKMSKSLGNFFTIRQ+ E+Y +R F++ A YRSP
Sbjct: 256 SEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFILRAQYRSP 315
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ---EHGKTARINPAAEDCINKLRDEFH 374
LNYS LD A A+ +Y L+ +AL F + + AR F
Sbjct: 316 LNYSDHHLDDARQALTRLYTALRG--LALPTFTIDWQQPQAAR---------------FK 358
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NTS F+ + S +N +L L ++ +
Sbjct: 359 AAMDDDFNTSEAFAVLFE-----LASEVNRTASLADAALLKALAGLLGLLQRD------- 406
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
E Q + A R + +++ Q I+ R AR++K+F+++D+IR L +
Sbjct: 407 ---------PETFLQGGESAQGR---SADEIEQFIQLRLQARQSKNFAEADRIRKQLADE 454
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 455 GILLEDSPQGTSWR 468
>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|61216143|sp|Q5X5P9.1|SYC_LEGPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
Length = 456
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 295/496 (59%), Gaps = 51/496 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + PGK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ G + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV + GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGNAYVSDNGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT L+ FQ L + K +L +L+ + IL
Sbjct: 346 AMNDDFNTPVALSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------IL 386
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLT 492
G L Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL
Sbjct: 387 GFL----------QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRADLL 436
Query: 493 RKGIALMDMGKETIWR 508
KGI L D T WR
Sbjct: 437 SKGIELEDGATGTTWR 452
>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 460
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/494 (44%), Positives = 297/494 (60%), Gaps = 41/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL ++ ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYVGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 KFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDVEPRATEFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I+ AYV + GDV F V K YG+LS Q L+ +AG RV V+S KR+P DF
Sbjct: 122 IELVEKLIDRGFAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLDHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y +L+ ++ P E+ + + F A M
Sbjct: 302 LNYSEDNLNQARSALERLYTSLRGLDLDAEP-----------TGGEEYVTR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ-QQLSLIESLRKIENEVKEVLRILG 436
+DD NT + F A +N LK Q QL + ++E+ ++G
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKTVDLGQASQLGAL---------MRELADVIG 392
Query: 437 LL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+L P A+ LK A E+ E + LI+ R +R +KD++ +D R LT
Sbjct: 393 ILHQDPEAF------LKGDAGDNDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEM 444
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 445 GIVLEDGPEGTTWR 458
>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 457
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/491 (46%), Positives = 287/491 (58%), Gaps = 38/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+ K+ F PI PG V MYVCG+T YD HLGHAR V FDL+ R+L V
Sbjct: 2 LKIYNSLTRAKQDFVPITPGSVRMYVCGMTVYDHCHLGHARVLVVFDLVQRWLRASGLRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + E+ L+NR+ D A L P ++PR ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIKRALENKESIGDLTNRFIAFMNDDAAALGVEKPDHEPRATEYVPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++ N AY V +GDV F+V K P YG+LSG+ L++ RAGERV VD K +P DF
Sbjct: 122 LELIGRLEKNGLAYQVPDGDVNFSVRKFPGYGKLSGKALDDLRAGERVDVDGTKEDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK A+ GEPSW SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKHAREGEPSWPSPWGDGRPGWHIECSAMSSVLLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A Q V+YWMHNG V ++EKMSKSLGNF TI++I +Y P LR F++ AHYRSP
Sbjct: 242 SEGAHQCRFVNYWMHNGFVRVDDEKMSKSLGNFCTIKEILRKYDPEVLRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L +TA +P + D F M
Sbjct: 302 LNYSDTHLDDARQALSRLYTAL--------------RTANTDPPSIDWDEPHALRFRDAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT F + + LN + + +L LR + + + R +
Sbjct: 348 DDDFNTPEACAVLFD-----LAAELN-------RSKSATLAGQLRGLAGLLGLLGRDPQV 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
A SE ELT E + LI ERAAA+ KD++ +D+IRADL G+
Sbjct: 396 FLQAAPSE-----------GGELTAEQIESLISERAAAKAQKDYTAADRIRADLLSAGVV 444
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 445 LEDGASGTRWR 455
>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 461
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/493 (45%), Positives = 282/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R VSFD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + GE L+ R E D L P +PR + H+ +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLEHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G + PA D F M
Sbjct: 302 LNYSEENLKQARSALERLYTALR------------GTEPQAEPAGGDVFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + Q +L LRK+ +ILGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKSEDMAQAN-ALAAELRKLA-------KILGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR KD++ +D R L G
Sbjct: 394 LEQDPEVFLQGGAQADDSEVAQIE-------ALIKQRNDARAAKDWAMADSARDQLNALG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|375084700|ref|ZP_09731560.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
gi|374567947|gb|EHR39145.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
Length = 474
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 294/495 (59%), Gaps = 28/495 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+QKE F P+ G+V +YVCGVT Y+ H+G+AR V++D++ RY HL +V
Sbjct: 2 LKVYNTLTKQKEEFKPLKEGQVSIYVCGVTPYNHPHIGNARPFVTWDVIKRYFTHLGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTDVDDKIIR AN G N +S RY Y M L P+VS + +I
Sbjct: 62 KHIQNFTDVDDKIIRTANQEGVNWSDISTRYINSYFEVMDKLHVKHADIYPKVSQTIPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI+ +I+ AY + GDV+F+VEK YG+LSG++LE+ AG R+ V+ K NP DFA
Sbjct: 122 IDMISVLIDKGYAYELNGDVYFSVEKFKGYGKLSGRKLEDMMAGARIEVNESKHNPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECS MS YL FD HGGG DLIFPHHENEIAQS
Sbjct: 182 LWKAAKPGEPFWESPWGNGRPGWHIECSTMSLKYLGKTFDFHGGGSDLIFPHHENEIAQS 241
Query: 259 CAACQD--SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
A C D S YW+HNG +T N EKMSKSLGNFFT+++I ++Y LR F++S HYRS
Sbjct: 242 QAYCGDDHSFARYWLHNGFITINQEKMSKSLGNFFTVKEILDKYPAEVLRFFIVSTHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEF 373
PL++S +LD A+ +L + AL +E K + E+ I K + F
Sbjct: 302 PLDFSDARLDEAT-------TSLNRLKNALDNLKELAKNTTDATSGEELIAKAKQCKQNF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + F D K IN N + + ++++ +L + E+
Sbjct: 355 FEAMDDDFNTALAIANMF-DLSKEINIYYNEVTSGKVACSKVAVDTAL----DVFSEMAD 409
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
I+G+L +D L + + +I+ R ARKNKD++ +D+IR +L
Sbjct: 410 IIGILE-----------EDDNSADDGLVDNLMNLIIDIRQNARKNKDWATADKIRDELKN 458
Query: 494 KGIALMDMGKETIWR 508
GI L D W+
Sbjct: 459 IGITLEDSPTGVRWK 473
>gi|365835886|ref|ZP_09377294.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|364565006|gb|EHM42743.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 469
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R VSFD++ RYL +L +
Sbjct: 10 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 69
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + GE L+ R E D L P +PR + H+ +I
Sbjct: 70 KYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEI 129
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAV+ P+YG LS Q LE +AG RV + KRNP DF
Sbjct: 130 IEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 189
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 190 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 249
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 250 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 309
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G ++ PA D + F M
Sbjct: 310 LNYSEENLKQARSALERLYTALR------------GTDSKAEPAGGD---EFESRFREAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + Q +L LRK+ +ILGL
Sbjct: 355 DDDFNTPEAYSALFD-----LAREVNRLKSEDMAQAN-ALAAELRKLA-------KILGL 401
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR KD++ +D R L G
Sbjct: 402 LEQDPEVFLQGGAQADDSEVAQIE-------ALIKQRNDARAAKDWAMADSARDQLNALG 454
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 455 IVLEDGPQGTTWR 467
>gi|363890596|ref|ZP_09317922.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
gi|361964885|gb|EHL17890.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
Length = 466
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 302/492 (61%), Gaps = 32/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+M+ QKE F + GKV MY CG T Y+ H+G+AR + FD L YLE++ EV
Sbjct: 1 MKIYNTMSSQKEEFKELEKGKVKMYSCGPTVYNYFHIGNARPFIVFDTLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII +AN+ G P+ L+++Y +EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFA
Sbjct: 121 IDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+
Sbjct: 241 EARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHA 375
NYS L+ A ++ + +++C+ L+ + KT E+ + + + F
Sbjct: 301 NYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M+DDLNT+ +T F D +KF N+++++ K QQ L ++ NE+ VL I
Sbjct: 357 KMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML-------NELTGVLNI- 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
DKA + ++ + + +LIE+R A+K+KDF+K+D IR +L + G
Sbjct: 408 --------------AMDKADEDVDVAK--IEELIEQRNIAKKSKDFAKADTIRDELKQMG 451
Query: 496 IALMDMGKETIW 507
I + D + W
Sbjct: 452 IEIKDTRQGVQW 463
>gi|411008777|ref|ZP_11385106.1| cysteinyl-tRNA ligase [Aeromonas aquariorum AAK1]
Length = 458
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 292/493 (59%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + G L+ R + D L + P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D A + G ++ D F M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAAAAA----GGDEQV------------DRFKEAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K + +++ L ++E+ +LG
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAGLGA---RLRELGAVLG- 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ + LK E EE ++ +LI ER AR +K+++ +D R LT G
Sbjct: 392 --------ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSAGKTSWR 456
>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777173|ref|YP_005185610.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|61216153|sp|Q5ZVY1.1|SYC_LEGPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507987|gb|AEW51511.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 456
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/498 (43%), Positives = 295/498 (59%), Gaps = 55/498 (11%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + PG +GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLKPGTIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ G + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD----EF 373
LNYS L +A A+ +YQ ++D + P ED +KL + +F
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKD----------------VPPQTED--SKLDEYWQVQF 343
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ M+DD NT L+ FQ L + K +L +L+ +
Sbjct: 344 NQAMNDDFNTPVALSVLFQ------------LAHEVNKSNSPALAHTLKNLAG------- 384
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRAD 490
ILG L Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRAD
Sbjct: 385 ILGFL----------QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRAD 434
Query: 491 LTRKGIALMDMGKETIWR 508
L KGI L D T WR
Sbjct: 435 LLSKGIELEDGATGTTWR 452
>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|109894898|sp|Q30ZH8.1|SYC_DESDG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 485
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/493 (42%), Positives = 299/493 (60%), Gaps = 15/493 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F P GK +YVCG+TAYDL HLGHAR++V+FD+L RYL H +V
Sbjct: 1 MQLYNTLTRKKEKFIPQREGKASVYVCGITAYDLCHLGHARSSVAFDVLVRYLRHTGLDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII+RA + G ++ +Y + DM L CL +PR + H+ ++
Sbjct: 61 TFVRNFTDVDDKIIKRAGETGLTSTEVAEKYMAAFHEDMDRLGCLRADIEPRCTQHIGEM 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I+ AY GDV+F V +YG+LSG+ +++ R+G RVA K +P DF
Sbjct: 121 IALCEDLISKGKAYSTASGDVYFRVRSFASYGKLSGRDVDDMRSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPYWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA YW+HNG V N EKMSKSLGNF TIR I + Y P LR+FL++ HYRSP
Sbjct: 241 TEAATGKEFARYWVHNGFVQVNAEKMSKSLGNFSTIRDILQGYLPETLRYFLLTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FH 374
++++ +D A + IYQTL E L + P E+ ++++ + ++
Sbjct: 301 IDFTFDGMDEAEKNLRRIYQTLNLVENELQKTKWSAA-----PLPEEVLSEMDETERAWN 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DDLNT+ L F ++ +N + ++ Q + ++L ++++ + +
Sbjct: 356 EAMEDDLNTAAALGHIF-GLVRLVNRIIEDKTMRKSAQAR----DALLRMQSMMARWGAV 410
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LGL +E L++++D R ++ V L+ ER ARK KDF +SD IR +L R
Sbjct: 411 LGLFTRQP-AEFLREMRDCRAARRDVDTARVETLLLERQEARKAKDFERSDAIREELARM 469
Query: 495 GIALMDMGKETIW 507
G+ + D W
Sbjct: 470 GVEVQDTPAGAAW 482
>gi|423207191|ref|ZP_17193747.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404620258|gb|EKB17155.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
Length = 458
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 293/493 (59%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+E+I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D A + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K + +++ +L ++E+ +LG
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAALGA---RLRELGAVLG- 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ + LK E EE ++ +LI ER AR +K+++ +D R LT G
Sbjct: 392 --------ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSAGKTSWR 456
>gi|337284525|ref|YP_004623999.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900459|gb|AEH24727.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 476
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 292/495 (58%), Gaps = 26/495 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + +YN++T++KE F P+ G+V MYVCG T YD HLGHAR ++FD++ RYLEH
Sbjct: 1 MVIMVYNTLTKRKEEFKPLRKGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V V NFTD+DDKII+RA + GE+P L+ ++ + +L DMA L+ P PRV++H+
Sbjct: 61 TVLMVMNFTDIDDKIIKRAQETGEDPKELAEKFIRVFLEDMAALKVKPADVYPRVTEHVN 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY V+F V K YG+LSG ++E + G RV K+NP D
Sbjct: 121 DIIAFIERLEEKGYAYEGSDGVYFEVSKFKEYGKLSGIKVEELKKGARVEPGEGKKNPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKKAKPGEPKWESPWGEGRPGWHIECSAMSSKYLGESFDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRS
Sbjct: 241 QSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL+Y+ L A + + +Y TL++ VA+ + + I + R +F+
Sbjct: 301 PLDYTEEGLMHAKNNLERLYNTLENIRVAMERVELAYTWGEEEFELYEVIKEGRRKFYEA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ L F+ +++++N + K ++PK+ LRK K V +
Sbjct: 361 MDDDFNTAEALKAVFE-----VSNAVNRYLTKVERPKES------VLRKAWEFFKAVSEV 409
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTR 493
GL +D ++ EE +++ L++ RA RK K + +D+IR +L +
Sbjct: 410 FGL------------FEDYFKEQKTGNEEALIKLLVDVRAQLRKEKRYDLADKIREELRK 457
Query: 494 KGIALMDMGKETIWR 508
GI L D + T+W+
Sbjct: 458 LGIQLEDTPQGTVWK 472
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9.1|SYC_PSYA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 300/496 (60%), Gaps = 29/496 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IY+S+T +K+ F P+V GKVGMYVCG+T YD H+GHAR V FD+ R+L L +V
Sbjct: 14 LVIYDSLTGRKQSFKPLVEGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLGYDV 73
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RA + GE +L+ R+ D L C P +PR +D+++++
Sbjct: 74 NYVRNITDIDDKIIARAAENGEEIGALTQRFITAMHEDATALGCQSPNAEPRATDYIDEM 133
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ MI +++ND AY + GDV++AV+ +YG+LS + L++ +AG RV V++ KRNP DF
Sbjct: 134 QQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEVENDKRNPFDF 193
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W S WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 194 VLWKAAKPDEPQWVSSWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHHENEIAQ 253
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA WMH G + + EKMSKSLGNFFTIR + +Y P +R FL+S+HYRS
Sbjct: 254 SEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETVRFFLLSSHYRSQ 313
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT-----ARINPAAEDCINKLRDE 372
+N+S LD A +++ +YQ L+ E Q+ G+T A IN A + +
Sbjct: 314 VNFSDSALDEAHNSLSRLYQALKVVE------QQKGQTLIVDDALINNAYASAPGQ---D 364
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M+DD N+S ++ F L + K ++ IES ++ ++K +
Sbjct: 365 FIKAMNDDFNSSTAISVLFG------------LARDINKASKVEDIESAWQLAQQLKALA 412
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+ L +L + LQ + +A + LT+E + LI ERA A+ NK+F+++D+IR L
Sbjct: 413 QTLNILQQ-PVQQFLQAVIGEAAEDG-LTDEAIDSLIIERADAKTNKNFARADEIRIQLK 470
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 471 DAGIELEDSRAGTTWR 486
>gi|430748585|ref|YP_007211493.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
gi|430732550|gb|AGA56495.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
Length = 482
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/502 (42%), Positives = 297/502 (59%), Gaps = 33/502 (6%)
Query: 16 DLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
D ++IYN+M+++KE+F P+ PGKV MYVCG T YD H+G+AR A+ FD++ RYLE +
Sbjct: 3 DGQIRIYNTMSREKEVFVPLTPGKVNMYVCGPTVYDYIHIGNARPAIFFDVVRRYLEAVG 62
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
EV Y+ NFTDVDDK+IR+A D+G ++ +Y + D+ L T PRV H+
Sbjct: 63 YEVNYIVNFTDVDDKLIRKAADIGSTVPEVAEKYIAAFNEDIEALGVRKATVNPRVMHHI 122
Query: 136 EQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
QI I ++ AY GDV+F K P YG+LS Q E + G R+ V +K NP
Sbjct: 123 PQIIAFIQGLVERGYAYESGGDVYFRTLKFPEYGKLSHQNPEELQYGIRIEVGEKKENPQ 182
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKAAK GE W+SPWGPGRPGWHIECSAM+ Y DIHGGG DL FPHHE E+
Sbjct: 183 DFALWKAAKPGEIFWESPWGPGRPGWHIECSAMAREYAGDTLDIHGGGHDLQFPHHECEV 242
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS + YWMHNG++ NNEKMSKSLGN T++++ +R P A+R+F++S HYR
Sbjct: 243 AQSESFTGKPLARYWMHNGYIHINNEKMSKSLGNGITVKELLKRTKPAAVRYFMLSTHYR 302
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG----KTARIN-----PAAEDCI 366
SPLN++ + A +++ I + L+ G + AR + P + I
Sbjct: 303 SPLNFTDETIRQAENSIERIVNCHVNLNHRLAALGSRGAAEAEQARASGSTGEPELDQRI 362
Query: 367 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
++R FH +MSDD NT +T F D + N +L K++ LS +R + +
Sbjct: 363 AEIRARFHEKMSDDFNTPDAVTALF-DLVSEANQAL--------KREVLSG-AVIRVLLD 412
Query: 427 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 486
E++ + R+LG LPP A+L +E++ +LI ER AR+NK+++++D+
Sbjct: 413 EMEAMDRVLGFLPPA--------------DAAQLEDEEIERLIAERTEARRNKNWARADE 458
Query: 487 IRADLTRKGIALMDMGKETIWR 508
IR L +GI L D + WR
Sbjct: 459 IRDLLANRGILLEDTPQGVRWR 480
>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
gi|109894945|sp|Q2NV45.1|SYC_SODGM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
Length = 457
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/497 (45%), Positives = 288/497 (57%), Gaps = 46/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL + EV
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRYRGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD++DKIIRRA + GE L+ R E D L L P +PR + +++ I
Sbjct: 62 NYVRNITDIEDKIIRRAAENGETFHQLTERMISEMHSDFDQLNILRPDQEPRATHYIDAI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I+ D AYV GDV FAV+ +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVGQLIDRDHAYVAANGDVMFAVDSDSDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DLIFPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNGRQLGHHFDIHGGGSDLIFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ WMH G V + EKMSKSLGNFFT+R + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNVWMHAGMVMVDREKMSKSLGNFFTVRDVLRYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA D +F A M
Sbjct: 302 LNYSEENLKQARSALERLYIALR------------GTDATAVPAGGD---HFVAQFIAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK +QP Q ++ +LR++ +LGL
Sbjct: 347 DDDFNTPKAYSVLFD-----IAREVNRLKSEQPAAQGMA--ATLRQLAG-------VLGL 392
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVL--QLIEERAAARKNKDFSKSDQIRADLTR 493
L P A+ LQQ E++V+ LI++R ARK + ++ +D+ R LT
Sbjct: 393 LEQEPAAF---LQQ---------GAAEDNVMIEALIQQRNDARKARQWALADEARDKLTA 440
Query: 494 KGIALMDMGKETIWRPC 510
GI L D + T WR C
Sbjct: 441 LGIVLEDGPQGTTWRRC 457
>gi|392551107|ref|ZP_10298244.1| cysteinyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
Length = 458
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 290/494 (58%), Gaps = 43/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+V GKVGMYVCG+T YD H+GHAR VSFD++ R+L H +V
Sbjct: 2 LQIYNTLTRQKEAFKPLVAGKVGMYVCGITIYDYCHVGHARTYVSFDVMNRFLRHSGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RAN+ GE +L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRANENGEAIDALTVRMTKAMHEDFDALNMLPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I+ AYV GDV F V YG LS Q L+ +AG RV V K +P DF
Sbjct: 122 IEMIERLIDKKHAYVASNGDVLFDVSTFEQYGSLSQQDLDMLQAGARVDVAEGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKVDEPSWSSPWGEGRPGWHIECSAMSNKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+ W+H G V N EKMSKSLGNFFT+R + + Y ++R FLI+ HYRS
Sbjct: 242 SCCATGEKYVNTWIHTGMVQVNKEKMSKSLGNFFTLRDVLKEYDRESVRFFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ IY L+ EV + E+ AR N A M
Sbjct: 302 LNYSTENLEQARAAMERIYTALRGVEVVETSL-ENDYVARFNTA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILG 436
+DD NT L F+ + +N LK + Q QL+ I +K + ILG
Sbjct: 346 NDDFNTPEALPVIFE-----LAKEINRLKDEDANQAGQLAFI---------LKTLGEILG 391
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+ QQ + L+ + +E ++ LI +R AR +K+++ +D+ R LT
Sbjct: 392 ---------IAQQDPESFLQGEQADDEVAEIEALILQRNQARADKNWALADEARDKLTAL 442
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 443 GVVLEDSAGKTTWR 456
>gi|54294205|ref|YP_126620.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Lens]
gi|61216142|sp|Q5WX29.1|SYC_LEGPL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
Length = 456
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 294/496 (59%), Gaps = 51/496 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + PGK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT L+ FQ L + K +L +L+ + IL
Sbjct: 346 AMNDDFNTPVALSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------IL 386
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLT 492
G L Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL
Sbjct: 387 GFL----------QKDPESFLQSGLAEEEKLVIEQLIAERLKARAERNWTKADQIRADLL 436
Query: 493 RKGIALMDMGKETIWR 508
KGI L D T WR
Sbjct: 437 SKGIELEDGATGTTWR 452
>gi|387126947|ref|YP_006295552.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274009|gb|AFI83907.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 436
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/468 (45%), Positives = 287/468 (61%), Gaps = 35/468 (7%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCG+T YDL H+GHAR V FD++ RYL +VTY+RN TD+DDKII+RA + GE
Sbjct: 1 MYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGYDVTYIRNITDIDDKIIKRAAENGET 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFF 160
+L++RY +E D L L P +PR ++ M+ + DMI +I+ AYV E GDV++
Sbjct: 61 IQTLTDRYIKEMHADADALGVLRPDREPRATEAMQPMLDMIQTLIDKGLAYVAENGDVYY 120
Query: 161 AVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPG 220
V + YG+LSG+++++ RAGER+AV+ K +P DF LWKAAK EP+WDSPWGPGRPG
Sbjct: 121 DVSEFSGYGKLSGRQVDDLRAGERIAVNEAKTDPLDFVLWKAAKPEEPAWDSPWGPGRPG 180
Query: 221 WHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNN 280
WHIECSAMSA L FDIHGGG DL FPHHENEIAQS A +V+YWMHNG V ++
Sbjct: 181 WHIECSAMSAECLGHHFDIHGGGQDLQFPHHENEIAQSEGAHGCQSVNYWMHNGFVRIDD 240
Query: 281 EKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQ 340
EKMSKSLGNFFT+R++ +Y A+R+F++ +HYRSPLNY+ QL+ A A+ Y +L+
Sbjct: 241 EKMSKSLGNFFTVREVLAKYPAEAVRYFILMSHYRSPLNYAEDQLEQAKTALTRFYHSLR 300
Query: 341 DCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINS 400
D ++E + A F M DD NT+ L+ L +
Sbjct: 301 DVTPETVSWREDAEFA--------------SRFAEAMDDDFNTALALS-----VLADVRQ 341
Query: 401 SLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAEL 460
+LN+ +++ +Q+ L L +LGL A + + +D+A K
Sbjct: 342 ALNIAREENDEQKSAYLAGLLLAFGE-------VLGLFQQSAEAFLTGGQQDEAGK---- 390
Query: 461 TEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
+ QLI ER AAR KD+S++DQ+R +LT GI L D +T WR
Sbjct: 391 ----IEQLIAERNAARAAKDWSRADQVRDELTAMGIVLEDAAGKTSWR 434
>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 500
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/507 (42%), Positives = 306/507 (60%), Gaps = 31/507 (6%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN++++QKE F P +PG+V MYVCG T Y+ HLG+AR V FD + RYL + +V Y
Sbjct: 3 LYNTLSRQKEEFVPAIPGRVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYLIYKGYQVLY 62
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
V+NFTD+DDKII+RA + +P +L+ +Y +EY +D L + P+VSDHM +I +
Sbjct: 63 VQNFTDIDDKIIKRAAEEKLDPSALAFKYTEEYYIDATSLNVMMADIHPKVSDHMAEIIE 122
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
++ +++ AY +GDV+F V + +YG+LSG+ LE+ AG RV V+ +KR+P DFALW
Sbjct: 123 LVEKLVQKGFAYQSDGDVYFEVRRFKDYGKLSGRALEDMLAGARVEVNEKKRDPMDFALW 182
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KAAK GEPSW+SPWG GRPGWHIECSAMS YL FD+HGGG DLIFPHHENEIAQS A
Sbjct: 183 KAAKPGEPSWNSPWGQGRPGWHIECSAMSLKYLGENFDMHGGGADLIFPHHENEIAQSEA 242
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
A + YW+HNG +T N EKMSKSLGNFF +R+I +++ P +R FL+ HYRSPL++
Sbjct: 243 ATGEPLARYWLHNGFITVNQEKMSKSLGNFFLVREILDKFSPEVVRFFLLGTHYRSPLDF 302
Query: 321 -----SVLQ--LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP------AAEDCIN 367
+V++ LD ++ + + Q V S K AR+ ++
Sbjct: 303 DDEKLAVVEKGLDRIRTSIQLLGEACQRAGVDFSMINAKEKPARVTSIIDTRHSSMKAFI 362
Query: 368 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES--LRKIE 425
K++ F M DD NT+ + G+ + K N + L K +Q++ L+++ L K+
Sbjct: 363 KIKTSFEQAMEDDFNTA-LAVGSLFELAKETNILVQSLGPKISEQEKACLLQAAELFKLF 421
Query: 426 NEVKEVLRILGLLPPGAYSEVL---QQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDF 481
N+V G + E L L + + E V+Q L++ R ARKNK++
Sbjct: 422 NQVL-----------GIFKEDLCTGYPLVTPVDESGDGMLEAVMQMLLDIRNEARKNKNW 470
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
+ SD+IR L + L D + T W+
Sbjct: 471 ALSDRIRDALKDINVILEDTPQGTRWK 497
>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
Length = 461
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 295/493 (59%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q LE +AG RV +DS KR+P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDIDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ +V +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASALGALMRELADIIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + D A E+ E + LI+ R +R +KD++ +D R L G
Sbjct: 394 LHQDPEAFLQ-----GDAAGNDDEVAE--IEGLIKLRNDSRASKDWANADLARDKLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPEGTTWR 459
>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 461
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/495 (45%), Positives = 296/495 (59%), Gaps = 43/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+NS+T+QK F PI PGKV MYVCG+T YD HLGHAR V FD++YRYL L +V
Sbjct: 2 LQIHNSLTRQKAPFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLRALGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY+RN TD+DDKIIRRAN+ GE +L+ R+ Q D L LPPT +PR + H+ +I
Sbjct: 62 TYIRNITDIDDKIIRRANENGEPFQALTERFIQAMREDSEALGVLPPTDEPRATAHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I+ AYV + GDV++AV + P+YG+LSG+ + RAG RV + KR+P DF
Sbjct: 122 LAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGESKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP+WDSPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMHNG V N EKMSKSLGNFFT+R+I Y P +R+F++++HYRSP
Sbjct: 242 SEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILRLYRPEEVRYFILTSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L A A+ +Y L+ A PA + R F A M
Sbjct: 302 LNYDDSALQKARAALTRLYTALRGLPEAA-------------PAEGEA---FRARFQAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + +N L+ Q +LR L
Sbjct: 346 DDDFNTPEALAVLFE-----LAREINRLRSDGSDQAAAH------------GALLREL-- 386
Query: 438 LPPGAYSEVLQQLKDKALKRAE----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GA +LQ ++ L+ ++ ++ +I +R AAR N+D++++D++R LT
Sbjct: 387 ---GAALGLLQDDPERYLRGGADADGPSDAEIEAMIAQRRAARANRDWAEADRLREALTA 443
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 444 AGIVLEDGPQGTTWR 458
>gi|333985593|ref|YP_004514803.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333809634|gb|AEG02304.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 471
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/492 (45%), Positives = 290/492 (58%), Gaps = 41/492 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+ K+ F P PGKVGMYVCG+T YD H+GHAR V FD + RYL H ++
Sbjct: 16 LKIYNTLTRSKQEFIPRQPGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYLRHAGYQL 75
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ GE+ +L+ R+ + D L LPP +P+ + + I
Sbjct: 76 TYVRNVTDIDDKIIQRANENGEDFAALTERFIEAMHEDERALAVLPPDIEPKATQSIADI 135
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI +I + AYV GDVF+AV + YG+LSG+ +E+ AGERV VD+ KR+P DF
Sbjct: 136 INMIAALIGREYAYVGANGDVFYAVNRFQGYGKLSGKNIEDLNAGERVDVDNAKRDPLDF 195
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W+SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 196 VLWKMAKPGEPYWESPWGHGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQ 255
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V N EKMSKSLGNFFT+R + ++Y P +R F++S+HYRSP
Sbjct: 256 SEGATGEPFVNYWMHNGFVRVNEEKMSKSLGNFFTVRDVLKQYRPEVIRFFILSSHYRSP 315
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS QLD A A+ +Y L+ ++ I+ + F M
Sbjct: 316 LNYSDEQLDDAGVALTRLYTALRGVDIV---------DVEIDA-------DYKQRFEQAM 359
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F + LN K L + L + + + G
Sbjct: 360 DDDFNTPVALAVLFD-----LARELNKADDKTVLAATLKQLAGLLGLLQDDPD-----GF 409
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L GA SE L E + QLI R AA+ NKD++++D IR L +GI
Sbjct: 410 LKGGAGSE-------------SLAEAAIEQLIAARKAAKANKDWAQADAIRDQLKGQGIV 456
Query: 498 LMDM-GKETIWR 508
L D+ G TIWR
Sbjct: 457 LEDVAGGNTIWR 468
>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 458
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 293/493 (59%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + G L+ R + D L + P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTARLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D A + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K + +++ +L ++E+ +LG
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAALGA---RLRELGAVLG- 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ + LK E EE ++ QLI +R AR +K+++ +D R LT G
Sbjct: 392 --------ILQQDPEAFLKGDEADEEVAEIEQLIAQRNQARADKNWAAADAARNRLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSAGKTSWR 456
>gi|398832797|ref|ZP_10590948.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
gi|398222691|gb|EJN09059.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
Length = 494
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 293/495 (59%), Gaps = 44/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K++F+PI PGKV +YVCG+T YD HLGHAR V FD++ R+L + +V
Sbjct: 37 LKIYNTLARDKQIFSPIEPGKVRLYVCGMTVYDFCHLGHARVMVVFDMVQRWLRSVGYDV 96
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA D GE+ L+ R+ D L P ++PR + ++ Q+
Sbjct: 97 TYVRNITDIDDKIIKRALDNGESIRQLTERFIVAMNEDADALGVQRPDHEPRATQYVPQM 156
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++ N AY+ E GDV +AV + P YGRLSG+ L++ RAGERV V++ KR+P DF
Sbjct: 157 LELIGKLQANGLAYLAEDGDVNYAVREFPGYGRLSGKSLDDLRAGERVDVNTGKRDPLDF 216
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAK GEP WDS WG GRPGWHIECSAM+ L FDIHGGG DL FPHHENE
Sbjct: 217 VLWKAAKQGEPDEAKWDSAWGCGRPGWHIECSAMAGDLLGEHFDIHGGGQDLQFPHHENE 276
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P +R F++ AHY
Sbjct: 277 IAQSEGAHGHAFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLQKYDPEVVRFFILRAHY 336
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L++ A S + R F
Sbjct: 337 RSPLNYSDAHLDDARQALTRLYTALKEVPPAASGSTDEAPARR---------------FA 381
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M+DD NT L+ F+ + + +N + +Q L L ++ + + L+
Sbjct: 382 EAMNDDFNTPLALSVLFE-----LANEVNRTRSADASRQLRQLGARLGLLQRDPEAFLK- 435
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
G + G + + + LI R+AA+ +DF+ +D+IRA+LT
Sbjct: 436 -GGVAAGG-----------------IDQAAIEALIAARSAAKAGRDFAAADRIRAELTAA 477
Query: 495 GIALMDM-GKETIWR 508
G+ L D G T WR
Sbjct: 478 GVVLEDKPGGLTEWR 492
>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 504
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 291/491 (59%), Gaps = 32/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI PGK+GMYVCGVT YDL H+GH R V+FD++ RYL +L ++
Sbjct: 43 LKIYNTLSRQKEEFRPITPGKIGMYVCGVTIYDLCHIGHGRTFVAFDVISRYLRYLGYDL 102
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E +L++R E D L L P ++P + H+++I
Sbjct: 103 TYVRNITDVDDKIIKRAAENNETCDALTSRMLIEMYKDFDALNILRPDFEPNATHHIKEI 162
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +++ AY+ + GDV FA+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 163 IALTERLLKRGHAYIADNGDVMFAINSDPDYGLLSRQDLEQLQAGARVEVADVKRNPLDF 222
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 223 VLWKMSKPNEPSWSSPWGDGRPGWHIECSAMNGKQLGEHFDIHGGGADLMFPHHENEIAQ 282
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 283 STCANDGPYVNYWMHTGMVMVDREKMSKSLNNFFTIRDVLAHYDAETVRYFLLSGHYRSQ 342
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A ++ +Y L+D + H K+ A++ I K R F A M
Sbjct: 343 LNYTEENLKQARTSLERLYTALRDTDA------NHVKS------ADNEIFKQR--FMAAM 388
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK L LR++ N ILGL
Sbjct: 389 NDDFNTPEAYSVLFDLA-----REINRLKVDDMAMAN-ELAVQLRQLAN-------ILGL 435
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E Q + + AE+ E + LI++R ARKNK ++++D R +LTR GI
Sbjct: 436 LTQNP--EQFLQSRAQVSHSAEI--EKIEALIKQRNDARKNKFWAQADSARDELTRMGII 491
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 492 LEDSPQGTVWR 502
>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
Length = 474
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 282/505 (55%), Gaps = 53/505 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F P+ P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 4 LTVYNTLTRQKEPFIPLNPQNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE L+ R+ D L P +P+ ++H+ Q+
Sbjct: 64 TYVRNITDIDDKIIARANENGETIQQLTARFIAAMNEDSDALGVQRPDVEPKATEHIAQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q+I N AY GDV++AV + P YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 124 IAMIEQLIANGKAYSAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 183
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQ
Sbjct: 184 VLWKAAKPEEPHWQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGGADLQFPHHENEIAQ 243
Query: 258 SCAACQ---------------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 302
SC A DS+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y
Sbjct: 244 SCGAHHGISGEHAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDA 303
Query: 303 LALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA 362
+R F++ AHYRSPLNYS LD A ++ +Y L + A EH
Sbjct: 304 EVVRFFILRAHYRSPLNYSDAHLDDAKHSLTSLYNALGNVAPAPFTLSEHA--------- 354
Query: 363 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 422
N F+A M DD +T + F+ L K+ K Q L L+
Sbjct: 355 ----NDYTRRFYAAMDDDFDTVKAVAVLFE------------LAKEVNKTQSAELSGCLK 398
Query: 423 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 482
+ +LGLL + + D L+ + + LI +R AR NK+++
Sbjct: 399 ALAG-------VLGLLQREPHEFLQSGAPDNG-----LSADAIEALIAQRNLARANKNWA 446
Query: 483 KSDQIRADLTRKGIALMDMGKETIW 507
+SD+IR +L +G+ L D G ET W
Sbjct: 447 ESDRIRDELAAQGVVLRDAGGETTW 471
>gi|421076448|ref|ZP_15537435.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392525459|gb|EIW48598.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 481
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/499 (43%), Positives = 304/499 (60%), Gaps = 27/499 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MT+QKE F P GKV MYVCGVT Y+ H+G+AR +++D++ RYLEH +
Sbjct: 1 MALKVYNTMTRQKEEFIPHEAGKVKMYVCGVTPYNHPHIGNARPFITWDVIKRYLEHCRY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +V+NFTDVDDKII+ AN+ G ++NRY Y M L P VSDHM
Sbjct: 61 EVFHVQNFTDVDDKIIKAANNEGVTWDVIANRYIASYFEVMDKLNIRRADIYPTVSDHMT 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +++ ++ AY+V+GDVF++VEK +YG+LSG+ +E+ +AG RV VD RK +P D
Sbjct: 121 EIINIVEGLVAKGYAYIVDGDVFYSVEKFNDYGKLSGRDIEDMKAGARVDVDERKHHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP+W+SPWG GRPGWHIEC+AMS YL + FD HGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPAWESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
QS A ++ V YW+HNG +T N EKMSKSLGNFF ++ I E Y P LR F++S HY
Sbjct: 241 QSEAFVEEGQPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLRFFVLSTHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDE 372
RSPL++S +L A ++ + L+ + ++ A N A E + ++
Sbjct: 301 RSPLDFSDERLSEAQRSL----ERLRTAVENVLQLEKLPDAANENKADELVKVAKQAEED 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNML---KKKQPKQQQLSLIESLRKIENEVK 429
F M DD NT+ ++ F A K IN N + K + + ++L ++ + N
Sbjct: 357 FCKAMDDDFNTALAISVMFGLA-KEINVYYNGVIAGKVQHTTEGYIALRQTYFMMAN--- 412
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
I+G+ +Q+ K EL E+ + +IE R AR+NKD++ +D++R
Sbjct: 413 ----IIGIF--------VQEQTGKVDDSQELVEQLMDIIIEIRQHARQNKDWTVADKVRD 460
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI L D + W+
Sbjct: 461 SLGAVGIILEDSPQGVRWK 479
>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
Length = 460
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/492 (45%), Positives = 293/492 (59%), Gaps = 37/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QKE F PI PGKVGMYVCGVT YD H+GHAR V+FD + RYL +V
Sbjct: 2 LQIFNTLTRQKEAFKPIQPGKVGMYVCGVTIYDYCHIGHARTYVAFDTMVRYLRSQGLDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKIIRRA + E+ +L R+ + D L L P +P V+ HM +I
Sbjct: 62 TYVRNITDVDDKIIRRAAENNESCEALVARFTEAMYQDFDALNLLRPDIEPTVTGHMAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I ++N AYV + GDV+F V+ +YG+LS Q LE ++G RV VD KRNP DF
Sbjct: 122 IDIIQTLVNKGHAYVTDAGDVWFEVKTFDDYGKLSRQDLEQLQSGARVEVDESKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 ALWKSAKPGEPSWTSPWGEGRPGWHIECSAMNGKHLGKVFDIHGGGSDLMFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G V N EKMSKSL NFFTIR++ ++Y ++R+FL+S+HYRS
Sbjct: 242 SCCAHDTNYVNYWVHSGMVQVNKEKMSKSLNNFFTIREVLKQYQAESVRYFLLSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L+ + PA E + N F A
Sbjct: 302 LNYSEENLNQAHAALERLYTALRG----------------VTPATELNLDNDHVARFQAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT+ L F + LN+ K+ +Q L +R + ++G
Sbjct: 346 MNDDFNTAEALPVLFD-----LARELNITKEDGESEQAAQLAGLMRYLGG-------VMG 393
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL + + D + + E LI+ R AR +KD++ +D R +LT GI
Sbjct: 394 LLEQAPEAFLQGGGDDDEVAKIE-------GLIKARNDARASKDWAAADAARDELTAMGI 446
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 447 VLEDGAGGTSWR 458
>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
gi|187629845|sp|A5IBG0.1|SYC_LEGPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
Length = 456
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/496 (43%), Positives = 293/496 (59%), Gaps = 51/496 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T++KE F + PGK+GMYVCG+T YD HLGHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA++ + L+ +Y D L LPP ++PR + H+E I
Sbjct: 62 TYVRNITDIDDKIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF
Sbjct: 122 IRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSP
Sbjct: 242 SEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L +A A+ +YQ ++D + A S E+ +++F+
Sbjct: 302 LNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQ 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT L+ FQ L + K +L +L+ + IL
Sbjct: 346 AMNDDFNTPVALSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------IL 386
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLT 492
G L Q ++ ++ L EE+ L QLI ER AR ++++K+DQIR DL
Sbjct: 387 GFL----------QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRTDLL 436
Query: 493 RKGIALMDMGKETIWR 508
KGI L D T WR
Sbjct: 437 SKGIELEDGATGTTWR 452
>gi|383191176|ref|YP_005201304.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371589434|gb|AEX53164.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 463
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/492 (44%), Positives = 290/492 (58%), Gaps = 34/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE ++L++R E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETFMALTDRMIGEMHADFAALNILPPDSEPRATQHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
D++ +I+ D AYV GDV F VE P+YG LS Q L+ +AG RV V++ KRNP D
Sbjct: 122 IDIVQTLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKPGEPSWTSPWGKGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+ WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS
Sbjct: 242 QSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS L A ++ +Y L+ + A +P R F A
Sbjct: 302 QLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAFVTR---------------FRAA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D + IN + K + LS L E++++ +LG
Sbjct: 347 MDDDFNTPEAYSVLF-DMARDIN---------RLKTEDLSAANGLAA---ELRQLAGVLG 393
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL + Q LK A + ++ LI++R AR +KD+ +D+ R L GI
Sbjct: 394 LLE----QDPEQFLKSGAQADNDDEVAEIEALIKQRNDARASKDWGMADKARDRLNEMGI 449
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 450 VLEDGPAGTTWR 461
>gi|417842975|ref|ZP_12489052.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
gi|341950209|gb|EGT76798.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
Length = 459
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+S +D R +LT G
Sbjct: 394 ---------LQQEPEKFLQAGSDDDEVAKIETLIKQRNEARAAKDWSAADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGANGTTWR 457
>gi|402309177|ref|ZP_10828173.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
gi|400373296|gb|EJP26230.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
Length = 466
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 301/492 (61%), Gaps = 32/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+MT +KE F I GKV MY CG T Y+ H+G+AR + FD+L YLE++ EV
Sbjct: 1 MKIYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII++AN+ G + + ++++Y EY D + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIKKANEEGISAIEVADKYIDEYYKDATAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +I+ AYV+ GDV+F V+K YG+LS + ++ +G R+ V+ +K++P DFA
Sbjct: 121 IGFIQVLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELVSGARIDVNEQKKSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL S DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGSNIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ +YWMHNG++ +N KMSKSLGNFFT+R + + Y LR F++++HYRSP+
Sbjct: 241 ECKNGCTFANYWMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDVLRFFMLTSHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFHA 375
NYS LDSA ++ +++C+ +L + + ++ +D + ++ F
Sbjct: 301 NYSKDLLDSAKSSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIG 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M+DDLNT+ +T F D +K N+S+N K Q LS++ NE+ VL I
Sbjct: 357 KMNDDLNTADAITAIF-DLVKLANTSVNENSSKTFVQSILSML-------NELTAVLNI- 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
A +E K E + +LIE R A+K+KDF+K+D+IR +L + G
Sbjct: 408 ------ANNE----------KAEEQDTSKIEELIELRNQAKKSKDFAKADEIREELRKMG 451
Query: 496 IALMDMGKETIW 507
I + D + T W
Sbjct: 452 IEIKDTRQGTQW 463
>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 466
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 302/492 (61%), Gaps = 32/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+MT +KE F I GKV MY CG T Y+ H+G+AR + FD+L YLE++ EV
Sbjct: 1 MKIYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII++AN+ G + + ++++Y EY D A + T PRV++++++I
Sbjct: 61 TFVQNFTDVDDKIIKKANEEGISAIEVADKYIDEYYKDAAAIGIRKATVHPRVTENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +I+ AYV+ GDV+F V+K YG+LS + ++ +G R+ V+ +K++P DFA
Sbjct: 121 IGFIQDLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELISGARIDVNEQKKSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GE WDSPWG GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGANIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ +YWMHNG++ +N KMSKSLGNFFT+R + + Y LR F++++HYRSP+
Sbjct: 241 ECKNGCTFANYWMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDVLRFFMLTSHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFHA 375
NYS LDSA ++ +++C+ +L + + ++ +D + ++ F
Sbjct: 301 NYSKDLLDSAKSSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M+DDLNT+ +T F D +K N+S+N K Q LS++ NE+ VL I
Sbjct: 357 KMNDDLNTADAITAIF-DLVKLANTSVNENSSKTFVQSILSML-------NELTAVLNI- 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
A +E K E + +LIE R A+K+KDF+K+D+IR +L + G
Sbjct: 408 ------ANNE----------KAEEQDTSKIEELIELRNQAKKSKDFAKADEIREELRKMG 451
Query: 496 IALMDMGKETIW 507
I + D + T W
Sbjct: 452 IEIKDTRQGTQW 463
>gi|406892373|gb|EKD37740.1| hypothetical protein ACD_75C01015G0004 [uncultured bacterium]
Length = 490
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/492 (41%), Positives = 297/492 (60%), Gaps = 8/492 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T++I+N+++ +KE + PG V +YVCG+T+YD H+GHAR+A++FD++ YL+
Sbjct: 1 MTMRIHNTLSGKKETLQTLEPGHVKLYVCGITSYDYCHIGHARSALAFDMIVNYLKFRGH 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTD+DDKII RA + + L+ R+ +E+ VDM L P +P+ ++H+
Sbjct: 61 KVTYVRNFTDIDDKIIARAAEQQTSAEELAARFIREFYVDMDKLGINRPDIEPKATEHIS 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ +I ++I+ AY DV++ V+ P+YG+LS + +E+ +AG R++++ +KRNP D
Sbjct: 121 EMIALIEELISKGKAYPSGNDVYYIVDSFPDYGKLSKRNVEDMQAGARISINEQKRNPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEP+W+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKGSKPGEPTWESPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS + + W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S HYR+
Sbjct: 241 QSEGVHGKAFANLWIHHGFVTIRDEKMSKSLGNFLTIRDILTHYHPEVLRFFIFSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAEDCINKLRDEFHA 375
PL++S + A+ + +Y+ + + L P + A I + + F
Sbjct: 301 PLDFSESAMQDATAGLERLYECVAAVD-RLDPQKSGANVASIFTDNDRQLLESMESRFQQ 359
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M +D NT+ G F D +K IN L P S +E L+K N ++++ I+
Sbjct: 360 AMDNDFNTAQA-QGIFFDTVKTINRICRAL----PAVPSASDVEFLKKCANNLRKLADIM 414
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+L A S L K+K + L + LI ER R K++++SD+IR L +
Sbjct: 415 GILREDAES-FLAAGKNKMISEGGLDVNAIEALIAERNQCRSAKNWARSDEIRDLLLAQN 473
Query: 496 IALMDMGKETIW 507
I L D T W
Sbjct: 474 IELKDGPNGTTW 485
>gi|342904069|ref|ZP_08725871.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|342904629|ref|ZP_08726428.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341953050|gb|EGT79564.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341954078|gb|EGT80572.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
Length = 459
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVETFRES----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + IE + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------IEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+S +D R +LT G
Sbjct: 394 ---------LQQEPEKFLQAGSNDDEVAKIEALIKQRNEARVAKDWSAADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|303327042|ref|ZP_07357484.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345890980|ref|ZP_08841841.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
gi|302863030|gb|EFL85962.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345048705|gb|EGW52528.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
Length = 483
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/490 (44%), Positives = 284/490 (57%), Gaps = 11/490 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++ +QKE F P+ PGKV MYVCG+TAYD H+GHAR+A+ FD L R+L HL EV
Sbjct: 1 MQIYNTLGRQKEEFIPVRPGKVHMYVCGITAYDYCHIGHARSALVFDALVRHLRHLGLEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII RAN G + ++ Y + DM L L +PR ++++ QI
Sbjct: 61 TFVRNFTDVDDKIINRANKEGRDWQEVAQTYIDAFHEDMDRLGVLRADLEPRATEYIPQI 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AY GDV+F V P YG+LSG+ L+ +G RVA K +P DF
Sbjct: 121 QELCAKLIAEGTAYATPSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWG GRPGWHIECSAMS+ YL DIHGGG DL+FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSSPYLP--LDIHGGGQDLVFPHHENEIAQ 238
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A C+ YW+HNG V N EKMSKSLGNF TIR I Y P LR FL+ HYRSP
Sbjct: 239 SEAVCRCELARYWVHNGFVQVNAEKMSKSLGNFKTIRDILGSYLPETLRFFLLGKHYRSP 298
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++++ +D A A +Y +L + AL +AE L F A +
Sbjct: 299 IDFTAEGMDEAEKAQHRVYSSLMEARKALERASWKKTPLPAELSAE--WAALPQAFEAAL 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ L F ++ +N L K + + L+E + L + G
Sbjct: 357 DDDLNTAQALGQIFSQ-VRIVNRLLEE-KNLRAAESTRDLLEDFLARARDWDAQLGLFGR 414
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P E L +L+ R L + V L+ +R R KDF++SD +R +L G+
Sbjct: 415 DP----VEFLTELRAMRAARKNLDMDRVEDLLRQRREVRMQKDFTRSDALRRELLDLGVN 470
Query: 498 LMDMGKETIW 507
+ D + W
Sbjct: 471 VRDTPEGQAW 480
>gi|42523767|ref|NP_969147.1| hypothetical protein Bd2317 [Bdellovibrio bacteriovorus HD100]
gi|61216207|sp|Q6MKR7.1|SYC_BDEBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39575974|emb|CAE80140.1| cysS [Bdellovibrio bacteriovorus HD100]
Length = 482
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 291/491 (59%), Gaps = 16/491 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS ++Q E FTP+ PG+V MYVCG T Y+ H+G+ R V F+++ +LEHL +V
Sbjct: 2 LKIHNSQSKQLEDFTPLTPGQVKMYVCGPTVYNFLHVGNFRGPVVFNMVRNWLEHLGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY NFTDVDDKII RAN+LG +P LS +Y EY D A L P P+V++HM+ I
Sbjct: 62 TYALNFTDVDDKIINRANELGMSPTELSEKYIAEYKKDFASLGLRPHDMNPKVTEHMDDI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ M+ +++ AY +GDV +++E +YG+LSG+ ++ AG RV VD +KRNP DFA
Sbjct: 122 RSMVESLVSQKKAYEAQGDVLYSIESFKDYGKLSGRNTDDLLAGARVEVDEKKRNPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GE SW SPWGPGRPGWHIECSAM + + DIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKAAKPGEVSWPSPWGPGRPGWHIECSAMIKNLFGDQIDIHGGGMDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ V YWMHN + +KMSKSLGN T+R+ E Y+ + ++SAHYR+
Sbjct: 242 EGCTGKAFVKYWMHNNMLNFGGQKMSKSLGNIVTMREFLEMYNAEIYKWMILSAHYRTLS 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSP--FQEHGKTARINPAAEDCINKLRDEFHAR 376
++ ++ A + +Y L E L+P QE A+I +D K+ +
Sbjct: 302 DFGDEAVERAVGGLSRVYSALSMAESYLTPEVTQEDAAFAKIT---QDAWKKVEEA---- 354
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+ D T F+ +F N+ + K P Q +L N V+++ ++
Sbjct: 355 MNHDFGTPDAFAAMFEVVRQF-NAQVRRGMKANPAIQGKAL-----AFHNFVRKMGSMMS 408
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L A++ L +L D LK+ L V L+ ER AR KDF+KSD++RA +T GI
Sbjct: 409 LFQEPAHA-FLIKLDDMLLKKMNLERSAVDALVAERGEARAAKDFAKSDELRAKITALGI 467
Query: 497 ALMDMGKETIW 507
++ D + + W
Sbjct: 468 SVSDTPEGSFW 478
>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 467
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/501 (43%), Positives = 293/501 (58%), Gaps = 36/501 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T++KE+F PI KVGMYVCG+T YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKIYNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA E+ L +R E D L L P +PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALKNRESCDQLVDRMVAEMYKDFDMLNVLRPDVEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F VE YG+LS Q LE +AG RV + K+NP DF
Sbjct: 122 ITLVEKLIQRGHAYVSSNGDVMFNVESFKEYGKLSRQNLEQLQAGARVEIVHIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWGPGRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPEEPSWDSPWGPGRPGWHIECSAMNYKVLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YWMH+G + + EKMSKSLGNFFT+R + Y ++R+FL++AHYRSP
Sbjct: 242 SCCAHGNQYVNYWMHSGMIMVDREKMSKSLGNFFTLRDVLNIYDAESVRYFLLNAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + K+A I E+ IN F M
Sbjct: 302 LNYSEENLNLAHTALERLYTALRGTD----------KSA-IACGGENYINA----FKEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + ++ F+ I +N LK + +E + ++E+ ILGL
Sbjct: 347 NDDFNTPNAVSVLFE-----IAREVNKLKNED--------MEKANSLAARLRELADILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + L D+ +K E LI++R AR KD++ +D R L++ +
Sbjct: 394 LYQDPEEFLQSGLDDEEVKLIE-------SLIKQRNEARAAKDWATADAAREQLSKMKVV 446
Query: 498 LMDMGKETIWRPCVLVEQEQE 518
L D T WR + E E E
Sbjct: 447 LEDGANGTTWRKDIQTESEAE 467
>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 461
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 295/493 (59%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF
Sbjct: 122 VELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ +V +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + +E + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------VEKASALGALMRELADIIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + D A E+ E + LI+ R +R +KD++ +D R L G
Sbjct: 394 LHQDPEAFLQ-----GDAAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPEGTTWR 459
>gi|348026620|ref|YP_004766425.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822674|emb|CCC73598.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 481
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 298/496 (60%), Gaps = 25/496 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T++KE F P+ PG+V MYVCG+T Y+ SH+G+AR V++D++ RYLEHL EV
Sbjct: 4 LKVYNTLTRKKETFVPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN G ++SNRY Y M L PRVS+HM++I
Sbjct: 64 THIQNFTDVDDKIINAANGEGVTWDTISNRYIASYFEVMDKLHIRRADKYPRVSEHMDEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ +I+ AYV++ DV+++VEK +YG LSG+ L++ AG R+ VD RK NP DFA
Sbjct: 124 IHMVQTLIDKGYAYVIDHDVYYSVEKFNDYGELSGRSLDDMMAGARIEVDDRKHNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSWDSPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKPGEPSWDSPWGKGRPGWHIECSAMSNKYLGDTFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CA-ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A + V YW+HNG +T N+EKMSKSL NFF ++ + E Y P ALR FLIS HYRSP
Sbjct: 244 EAFTGKKPMVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEHYSPDALRFFLISNHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S +L+ + ++ + T D + L K+ E +K + F M
Sbjct: 304 LDFSDERLEEMTRSLERL-GTAIDNVLELLAMPAGAKSPEAQQLLETA-HKDEEAFENAM 361
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + + A D K +N N + +L +EVK V +
Sbjct: 362 CDDFNTA-LASAAMFDLAKNVNIFKNAVVNNGVPVDSAAL--------SEVKRVFK---- 408
Query: 438 LPPGAYSEVLQQLKDKALKRAELTE----EDVLQ-LIEERAAARKNKDFSKSDQIRADLT 492
++++L L+D+ + E +D++Q +++ R R K ++ +D IR L
Sbjct: 409 ----TFTDILGILEDRWTGKKEDASSKDYDDLMQAILDIRQECRAQKQYALADAIRDKLA 464
Query: 493 RKGIALMDMGKETIWR 508
GI + D + W+
Sbjct: 465 ALGITIEDSPQGARWK 480
>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 459
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLDYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGTGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+S +D R +LT G
Sbjct: 394 ---------LQQEPEKFLQAGSDDDEVAKIEALIKQRNEARVAKDWSAADSARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGANGTTWR 457
>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|229558613|sp|B0BPJ8.1|SYC_ACTPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 459
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LL P A+ LQ D E+ E + LI++R A+ K+++ +D++R L
Sbjct: 393 LLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAM 443
Query: 495 GIALMDMGKETIWR 508
I L D T WR
Sbjct: 444 NIVLEDTPNGTTWR 457
>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 479
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/490 (42%), Positives = 292/490 (59%), Gaps = 19/490 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N+++ +KE F P+ V +YVCGVT YDL H+GHAR++ FD++ RYL V
Sbjct: 2 LKVFNTLSNKKEEFQPLQKDNVKIYVCGVTVYDLCHIGHARSSGVFDVIRRYLMFKGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTD+DDKII+R+N+ + L+ + E+ DM L L P + P+ +D+++Q+
Sbjct: 62 TFVKNFTDIDDKIIKRSNEKQMDWRELAANFIAEHDADMDSLNILRPDHTPKATDYIKQM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M +I AY GD+++ V+K YG+LS ++LE+ AG R+ V +K NP DF
Sbjct: 122 IQMCETLIEKGFAYESNGDIYYRVQKFEEYGKLSHRKLEDMMAGARIEVSVKKENPYDFV 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA+K GEPSW+SPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKASKPGEPSWESPWGQGRPGWHIECSVMSEDLLGLPFDIHGGGKDLVFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AAC YW+HNG V N EKMSKSLGNFFTIR + + + +R+FL++ HYRS L
Sbjct: 242 EAACGCMFSKYWIHNGFVNVNQEKMSKSLGNFFTIRDVLKEFDAEIVRYFLMTTHYRSAL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A ++ IY L + +S F K I AE D+F M
Sbjct: 302 DFSQDHLLEAEKSLNRIYTMLDE----ISRFNAGKKGVDITKEAEKMKETFMDKFQTAMD 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT L F+ I + +L K K +L E+++ + + +VL I+
Sbjct: 358 DDFNTPEALAAMFE----VIRETNRLLGSKPNKISFPALQEAVQDVFKVILDVLGIVKYT 413
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P + L ++EE++ Q I++RA A+K+K+F +D IR +L ++GI L
Sbjct: 414 PEKWFRINLS-----------ISEEELRQKIQDRADAKKDKNFELADSIRQELKQQGIEL 462
Query: 499 MDMGKETIWR 508
+D TI+R
Sbjct: 463 LDTIDGTIYR 472
>gi|386742349|ref|YP_006215528.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479042|gb|AFH92837.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 462
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 290/493 (58%), Gaps = 37/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI PGK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E SL+ R E D L L P +PR + H+++I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ NYG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ G + PA + K F M
Sbjct: 302 LNYTEENLKQARTALERLYTALR------------GTDKSVAPAGGEIFKK---RFEDAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + + ++ +E++++ +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKSENKV--------AANELASELRKLAGVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ L+ A + + LI++R ARKNK+++ +D R +LT G
Sbjct: 394 LEQDPEAF------LQGNAQGEGDEEVAKIEALIKQRNDARKNKEWALADAARDELTAMG 447
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 448 IVLEDGAQGTTWR 460
>gi|406879047|gb|EKD27781.1| hypothetical protein ACD_79C00582G0003 [uncultured bacterium]
Length = 492
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/512 (41%), Positives = 302/512 (58%), Gaps = 45/512 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LK+YN+MT+ KE F P+ G+V MYVCG+T YD +HLGHARA SFD+L+R+L++L
Sbjct: 1 MELKLYNTMTKTKEKFEPLKSGEVKMYVCGMTVYDNAHLGHARAYTSFDVLFRFLQYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRA----NDLGENPLS----LSNRYCQEYLVDMADLQCLPPTYQ 128
VTYVRN TD+DDKII RA D NP LS R+ +E+L DM L LP + +
Sbjct: 61 RVTYVRNVTDIDDKIINRAREQIQDFSTNPNKSCEILSTRFYKEFLDDMKALNLLPASIE 120
Query: 129 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 188
P+ + H+++I DMI +IN AY V+G+V+F + K NYG+LSG+ +E+ R+ D
Sbjct: 121 PKATMHIKEIIDMIEGLINKGYAYNVDGNVYFNITKFLNYGKLSGRNIEDTELHSRIDQD 180
Query: 189 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 248
+ K+NP DFALWK +P W+SP+G GRPGWHIECSAMS YL +FDIHGGG DLIF
Sbjct: 181 ANKKNPLDFALWKKHVNDDPYWESPFGKGRPGWHIECSAMSMKYLGEEFDIHGGGQDLIF 240
Query: 249 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 308
PHHENEIAQS A YW+HNG +T N+EKMSKSL NF TIR++T Y+PL ++ +
Sbjct: 241 PHHENEIAQSAAYSGKGFARYWIHNGFITVNHEKMSKSLKNFKTIRELTAVYNPLNIKFY 300
Query: 309 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 368
L+S HYRSPL+++ + + ++ +F I TL ++ L ++ D K
Sbjct: 301 LLSTHYRSPLDFNDNLIKNCAEGLFKIENTLSRAKLVLE-----------ESSSIDNTKK 349
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
L +F M DD+NT L+ F + L +K+ +++ SLI ++
Sbjct: 350 LPADFIDAMCDDINTPKALSVIFNECTGLNKILEGNLPEKEAIKEKYSLIINM------- 402
Query: 429 KEVLRILGLLP-------------PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 475
L+ILGL P GA ++ +K LK +L E+ + +L+ R A
Sbjct: 403 ---LQILGLEPEIEKMHVVPKKKWAGANEAIIALMK---LKPQKLNEDQISRLVSARGMA 456
Query: 476 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 507
+ K+F+ +D+IR L I + D W
Sbjct: 457 KIEKNFTLADEIRNYLKTLNIEIRDKADACHW 488
>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
Length = 460
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 292/493 (59%), Gaps = 36/493 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L ++N++T++KE FTP G+VGMYVCGVT YDL H+GHAR V+FD++ RYL +
Sbjct: 1 MALTLFNTLTREKETFTPREAGRVGMYVCGVTTYDLCHIGHARTYVAFDVVVRYLRKIGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKII+RA + GE +L+ RY E D A L L P +PRV+ HM+
Sbjct: 61 DVTYVRNITDLDDKIIKRAAENGEPFDALTQRYIDEMHRDFAALNLLEPDVEPRVTQHMD 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I MI ++ AY + GDV F V +YGRLS Q LE +AG RV V++ K +P
Sbjct: 121 DIIRMIESLVTQGYAYQADNGDVLFDVSTFDDYGRLSRQNLEQLQAGARVDVEASKLDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AKAGEPSWDSPWG GRPGWHIECSAM+ +L FDIHGGG DL FPHHENEI
Sbjct: 181 DFVLWKKAKAGEPSWDSPWGEGRPGWHIECSAMNKAHLGETFDIHGGGSDLTFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A Q + V+YWMH+G V ++ KMSKSLGNFFTIR + Y +R+FL+S+HYR
Sbjct: 241 AQSCCANQTNYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLNAYDAETVRYFLLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNY+ L+ A A+ +Y L+ L+P Q E+ ++F
Sbjct: 301 SQLNYTQDNLEQAHAALERLYTALR----GLTPEQPD----------ENLRLPYWNQFTD 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD N ++ F+ ++ IN + + + QL+ + + E+ +L
Sbjct: 347 AMNDDFNAPEAMSVLFE-LVREINKARD---NDAERAAQLAHV---------LVELADVL 393
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL S LQ D + E LI +R AR KD++ +D+ R LT G
Sbjct: 394 GLLQQSPES-FLQGGADDEVALIE-------ALIAQRNKARAEKDWAAADEARDRLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 446 IVLEDGANGTQWR 458
>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 482
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/499 (42%), Positives = 303/499 (60%), Gaps = 33/499 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H+E I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 ITMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------- 369
PL++S +L+ A+ ++L+ A+ + P A D +L
Sbjct: 303 PLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGACDEAQRLLEKAKEY 352
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
+EF A MSDD NT+ + F A +N+ + ++ + E++ +++ K
Sbjct: 353 EEEFEAAMSDDFNTALATSSMFGLA-----KEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+ ++G+L + + A EE + ++ R A R+ K ++ +D IR
Sbjct: 408 FMTDVIGVLE--------KAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRD 459
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI + D + W+
Sbjct: 460 RLAEIGITIEDSPQGARWK 478
>gi|342218372|ref|ZP_08710986.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
gi|341589784|gb|EGS33046.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
Length = 481
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/496 (44%), Positives = 306/496 (61%), Gaps = 25/496 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KELF P PG V +YVCG+T Y+ SH+G+AR V++D++ RYL+HL EV
Sbjct: 4 LFVYNTLTRKKELFKPQTPGHVNIYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKII AN G + +++NRY Y M L PRVS+HM+ I
Sbjct: 64 THVQNFTDVDDKIINAANGEGVSWDTIANRYIASYFEVMDALHVHRADIYPRVSEHMDAI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +IN + AYV++ DV+++VEK YG+LSG+ L++ AG R+ V+ +K++P DFA
Sbjct: 124 FTMIQTLINKNIAYVLDNDVYYSVEKFDGYGKLSGRCLDDMMAGARIEVNDKKKHPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP+WDSPWG GRPGWHIECSAMS YL + FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKPGEPAWDSPWGKGRPGWHIECSAMSHQYLGNSFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAAC--QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
AC + V YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R FLIS HYRS
Sbjct: 244 -EACFGHEPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYKPDAVRFFLISNHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +L + ++ + ++ + +AL K+A + +D ++ ++F
Sbjct: 303 PLDFSDARLKEMTRSLDRVRTSIVNV-LALLNMPTGSKSAEADNLLQDA-KQIMEDFETA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR--- 433
M DD NT+ G F+ A K +N+ Q QQ ++S + EVK + R
Sbjct: 361 MCDDFNTALASAGIFELAKK-----VNIY--HQAVAQQKVAVDS--SVVTEVKRIFRTMT 411
Query: 434 -ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
ILG+L A+ E Q K + A L E +++ R R NK + +D IR LT
Sbjct: 412 DILGILED-AWQE--QSDDVKQTEYAALVE----TILDIRNECRANKQYELADSIRNKLT 464
Query: 493 RKGIALMDMGKETIWR 508
GI + D + W+
Sbjct: 465 ELGIIIEDSPQGVRWK 480
>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|254781698|sp|B7VGZ1.1|SYC_VIBSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 461
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 295/493 (59%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV +DS KR+P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDIDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ +V +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASALGALMRELADIIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + D A E+ E + LI+ R +R +KD++ +D R L G
Sbjct: 394 LHQDPEAFLQ-----GDAAGNDDEVAE--IEGLIKLRNDSRASKDWANADLARDKLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPEGTTWR 459
>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|259511826|sp|C3KVS3.1|SYC_CLOB6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 465
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 296/490 (60%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F P+VPG+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLPLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ G L +R+ +EY D DL T PR ++ M++I
Sbjct: 61 KFIQNFTDIDDKMIKKANEEGTTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K EP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPEEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ LDS A+ +Y ++ + E L + G D + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEGLRDE-ELKYRDELQKYKEKYIEKMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F D ++ +N+++ + K+ + L LI L
Sbjct: 360 DDFNTADAISVIF-DLIRDVNTNITIESSKELVKYALDLIREL----------------- 401
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
G+ +LQ+ +L EE++ +LI+ER ARK KD++ +D+IR DL +GI L
Sbjct: 402 --GSPLGILQKSTKASL------EEEIERLIQERQKARKEKDWALADKIRDDLKERGIVL 453
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 454 EDTPQGVRWK 463
>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|187629818|sp|A3N0S3.1|SYC_ACTP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 459
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LL P A+ LQ D E+ E + LI++R A+ K+++ +D++R L
Sbjct: 393 LLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAM 443
Query: 495 GIALMDMGKETIWR 508
I L D T WR
Sbjct: 444 NIVLEDTPNGTTWR 457
>gi|333908247|ref|YP_004481833.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
gi|333478253|gb|AEF54914.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
Length = 460
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/490 (43%), Positives = 292/490 (59%), Gaps = 35/490 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN+++ +KE+F PI GKVGMYVCG T YD H+GHARA +SFD++ R++ HL E+
Sbjct: 2 LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E +L+ R D L P +P+ ++ M+QI
Sbjct: 62 NYVRNITDVDDKIIKRAEENNETTQALTERMIAAQREDELRLGNKMPDREPKATEFMQQI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +I+ AY GDV++ YG+L+ ++LE+ AG R+ V++ K +PADF
Sbjct: 122 IDMVQVLIDKGFAYQGTSGDVYYRATAFKEYGKLNNRKLEDMLAGARIDVETAKEHPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GE +W+SPWG GRPGWHIECSAMS + L S FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKVGEVAWESPWGLGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V NNEKMSKSLGNFFT+R + E+Y+P +R+ ++S+ YRSP
Sbjct: 242 SEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVVRYLMVSSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L+ A A+ +Y L+ VA + TAR F M
Sbjct: 302 IDYSDQSLNEAKVALERLYTALRQQSVA-EEWVASEYTAR---------------FEEAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT ++ F+ + LN K ++ + + E+K + +LGL
Sbjct: 346 QDDFNTPVAVSVLFE-----LVRELNKAKAEESDKAA--------NLAAELKSLASLLGL 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L +V + + A L E + LI+ER ARK+K+F++SD+IR L +GI
Sbjct: 393 L-----DQVPEYFLQNSTITAGLDESAIQALIDERTQARKDKNFARSDEIRDQLADQGIE 447
Query: 498 LMDMGKETIW 507
L+D + T W
Sbjct: 448 LLDSREGTTW 457
>gi|400288066|ref|ZP_10790098.1| cysteinyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 486
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/509 (43%), Positives = 298/509 (58%), Gaps = 35/509 (6%)
Query: 9 TVAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLY 68
T K L L Y+S+T K+ F P+ GKVGMYVCG+T YD H+GHAR V++D++
Sbjct: 2 TTPLAKARLGLTNYDSLTASKQYFEPLDAGKVGMYVCGMTIYDYCHIGHARIMVAYDVIS 61
Query: 69 RYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQ 128
R+L L EV YVRN TD+DDKII RA + E L+ R+ D L C+PP +
Sbjct: 62 RWLRQLGYEVNYVRNITDIDDKIINRAAENNEPINELTERFITAMHDDELALGCIPPNQE 121
Query: 129 PRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 187
PR +D++++++D+I ++ AY +GDV++AV+ YG+LS + L+ +AG RV V
Sbjct: 122 PRATDYIDEMQDIIETLVAGSYAYAGNKGDVYYAVDSFAGYGKLSKRNLDEMQAGSRVEV 181
Query: 188 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 247
++ KRNP DF LWKAAK GEP W SPWG GRPGWHIECSAMS L + FDIHGGG DL
Sbjct: 182 ENDKRNPFDFVLWKAAKPGEPQWASPWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQ 241
Query: 248 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 307
FPHHENEIAQS A+ WMH G + + EKMSKSLGNFFTIR + +YH +R+
Sbjct: 242 FPHHENEIAQSEASTGCKYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYHSETVRY 301
Query: 308 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
FL+S+HYRS +N+S + LD A +++ +Y TL+ E Q+ G+T IN E IN
Sbjct: 302 FLLSSHYRSQVNFSDVALDEAHNSLSRLYNTLKIAE------QQKGQTLEIN---EHLIN 352
Query: 368 KLRDE-----FHARMSDDLNTS---HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 419
F M+DD NTS +L G +D K I S + K Q QQ +L +
Sbjct: 353 DAYSSDAGYFFIQAMNDDFNTSAATSVLFGLARDINKAIKSE-EVDKAWQWAQQLKALAQ 411
Query: 420 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 479
L ++ V + L+ + Q D LT+ + LI ERA A+ NK
Sbjct: 412 VLNILQQPVSQFLQAV----------AGDQADDG------LTDAVIDGLIIERAEAKANK 455
Query: 480 DFSKSDQIRADLTRKGIALMDMGKETIWR 508
DF+++D++R L GI L D T WR
Sbjct: 456 DFTRADEVREQLKAAGIELEDSRAGTTWR 484
>gi|312135922|ref|YP_004003260.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311775973|gb|ADQ05460.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 465
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/482 (42%), Positives = 291/482 (60%), Gaps = 28/482 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T KE F P+ GKV MYVCG T YD H+G+AR + FD L RY E+ EV
Sbjct: 1 MKLYNTLTMTKEEFEPLEQGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTD++DK+I RAN G L+ R+ +EY D L T PR ++ + +
Sbjct: 61 IYIQNFTDIEDKMINRANKEGITVFELAERFIKEYYKDADRLNVKRATKNPRATEEIPDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++I+ AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFA
Sbjct: 121 ITLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDLSEKKEDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+W SPWG GRPGWH+ECS M+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEPAWLSPWGEGRPGWHVECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PL
Sbjct: 241 EAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ ++ A A+ IY+ ++ E + E G + N + + + + +F M
Sbjct: 301 NFSLDLIEQAESALKRIYKCYENLEYLIR--NETGSNSS-NSTLKASLEQFKIKFIDAME 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ TG + ++ IN+ N K + L + +KE+ ILG+L
Sbjct: 358 DDLNTAEA-TGYLFEMVREINTHANTCSK-----------DVLILARDTLKELCGILGIL 405
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
E +Q +D+ ++L+L+E+R ARK K+F+++D+IR +L G +
Sbjct: 406 ------EQYEQKEDE-------IPLEILELVEKRNQARKAKNFAEADRIRDELKSLGYIV 452
Query: 499 MD 500
+D
Sbjct: 453 LD 454
>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
Length = 459
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 290/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YNS+T+QKE F P+ PGK+GMYVCG+T YDL H+GH R VSFD++ RYL + EV
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + E+ SL+ R E D L P ++PR + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCKSLTERLIGEMHRDFDALNMKRPDFEPRATQHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++I + AYV + GDV F+V YGRLSGQ +E +AG RV V+ KR+P DF
Sbjct: 122 IDMVEKLIEKEYAYVSDNGDVLFSVSSFAEYGRLSGQNIEQLQAGARVEVEDTKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLKHYDAGTIRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ ++ + P A+E + +F A M
Sbjct: 302 LNYSEDNLKQAKSALDRLYTSLKGLDLNVEPAD----------ASEFVV-----KFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K Q S + ++KE+ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMVREIN------RVKGSDLAQASAMGV------KLKELAGVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L Q D K E ++++V Q LI ER AR KD+ +D R L
Sbjct: 394 ---------LDQDVDIFFK-GEGSDDEVAQIEALIVERNRARAEKDWPAADVARDGLNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 444 GVILEDGPSGTTWR 457
>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 459
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----VAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LL P A+ LQ D E+ E + LI++R A+ K+++ +D++R L
Sbjct: 393 LLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAM 443
Query: 495 GIALMDMGKETIWR 508
I L D T WR
Sbjct: 444 NIVLEDTPNGTTWR 457
>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
gi|254781683|sp|C1D7F5.1|SYC_LARHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
Length = 457
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/495 (44%), Positives = 291/495 (58%), Gaps = 46/495 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++++QKE F PI PGKV MYVCG+T YD HLGHAR V FD++ R+L ++
Sbjct: 2 LHLYNTLSRQKERFQPIQPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE L+ R+ D A L P ++PR + + +
Sbjct: 62 TYVRNITDIDDKIIRRAAENGEPINVLTQRFIDAMDEDAAALGVQKPNFEPRATQFVPDM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 ISMIEELIGKGRAYAAPNGDVYYAVREFAGYGQLSGKSLDDLRAGERVDVDPNKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W SPWG GRPGWHIECSAM+ HY FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWPSPWGQGRPGWHIECSAMNEHYFGPHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSP
Sbjct: 242 SEGAHDCKFVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI----NKLRDEF 373
LNYS L+ A A+ +Y L++ PAA+ + N F
Sbjct: 302 LNYSDAHLEDARSALSRLYTALKNV-----------------PAADVALDWEANDYARRF 344
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M DD NT + F+ L + K + L L+ +
Sbjct: 345 RAAMDDDFNTVEAVAVLFE------------LAGEANKSRSAELAGWLKTLGG------- 385
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGLL + + L+ +L+ E++ ++V QLI R AAR KD+++SD+IR +L
Sbjct: 386 VLGLLQ----RDPVDFLQGGSLE-GEISADEVEQLIAARKAARAGKDWAESDRIRDELIA 440
Query: 494 KGIALMDMGKETIWR 508
+GI L D T WR
Sbjct: 441 RGIVLEDGAGGTTWR 455
>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
gi|188022312|gb|EDU60352.1| cysteine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 494
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 290/493 (58%), Gaps = 37/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI PGK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 34 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 93
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E SL+ R E D L L P +PR + H+++I
Sbjct: 94 NYVRNVTDIDDKIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEI 153
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ NYG+LS Q LE +AG RV V KRNP DF
Sbjct: 154 IEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRNPMDF 213
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 214 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQ 273
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y P +R+FL+S HYRS
Sbjct: 274 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLLSGHYRSQ 333
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ G + PA + K F M
Sbjct: 334 LNYTEENLKQARTALERLYTALR------------GTDKSVAPAGGEIFKK---RFEDAM 378
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + + ++ +E++++ +LGL
Sbjct: 379 NDDFNTPEAYSVLFDMA-----REINRLKSENKV--------AANELASELRKLAGVLGL 425
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ L+ A + + LI++R ARKNK+++ +D R +LT G
Sbjct: 426 LEQDPEAF------LQGNAQGEGDEEVAKIEALIKQRNNARKNKEWALADAARDELTAMG 479
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 480 IVLEDGAQGTTWR 492
>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 462
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/500 (43%), Positives = 293/500 (58%), Gaps = 51/500 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ +L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEALTTRMLAEMHKDFDALNILRPDSEPRATRHIGEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV GDV F V+ PNYG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNY+ L A A+ +Y L+ + + P DEF AR
Sbjct: 302 LNYTEENLKQARSALERMYTALRGTDKSAVPAGG-------------------DEFKARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F D ++ +N + K + +S + +++E+
Sbjct: 343 IEAMNDDFNTPEAYSVLF-DMVREVN---------RLKSEDMSAANGMAA---QLRELAS 389
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEED-----VLQLIEERAAARKNKDFSKSDQIR 488
+LGL L+Q + LK TE+D + LI++R ARKNKD++++D R
Sbjct: 390 VLGL---------LEQDPEVFLKGGAQTEDDAEVAKIEALIQQRLDARKNKDWAQADAAR 440
Query: 489 ADLTRKGIALMDMGKETIWR 508
+LT GI L D + TIWR
Sbjct: 441 DELTAMGIVLEDSAQGTIWR 460
>gi|339483845|ref|YP_004695631.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338805990|gb|AEJ02232.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 460
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/491 (44%), Positives = 287/491 (58%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+ ++K+ F PI+PGKV +YVCG+T YD HLGHAR V FD + R+ + +V
Sbjct: 2 LKIYNSIAREKQDFVPIIPGKVKIYVCGMTVYDYCHLGHARVLVVFDTVIRWFKANDFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRN TD+DDKII+RA + E+ +L+ R+ Q D + L PTY+PR +D++E +
Sbjct: 62 SYVRNITDIDDKIIKRAQENNESIGTLTQRFIQAMNEDSSALGVSSPTYEPRATDYVENM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I D AY GDV++AV P+YG+LSG+ L + RAGERV +DS K++P DF
Sbjct: 122 IGMIGTLIEKDLAYRASNGDVYYAVHNFPSYGQLSGKSLNDLRAGERVEIDSNKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP W+SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPFWESPWGRGRPGWHIECSAMSEQLLGVHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG V +NEKMSKSLGNFFT+R+I + Y P +R F++ A YRSP
Sbjct: 242 SEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKHYQPEVVRFFILRAQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A+ +Y L++ + I+ A D N F M
Sbjct: 302 LNYSDQHLKDTKLALDRLYIALKEVK-------------PIDMPAIDWNNLHAQRFKTAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ A S +N K+ L L ++ +E L+
Sbjct: 349 EDDFNTPEAIAVLFELA-----SDVNKTGSKENAGLLKGLGNLLGLLQQNPQEYLQ---- 399
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ L L A++R LI++R +ARK +S +D IR +L +GI
Sbjct: 400 --NKVVTSELNSLPQDAIER----------LIQQRISARKEGRYSDADAIRKNLLEQGII 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDNPQGTTWR 458
>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 459
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL + P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LL P A+ LQ D E+ E + LI++R A+ K+++ +D++R L
Sbjct: 393 LLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAM 443
Query: 495 GIALMDMGKETIWR 508
I L D T WR
Sbjct: 444 NIVLEDTPNGTTWR 457
>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 459
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKAED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD++ +D R +LT G
Sbjct: 394 ---------LQQEPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGANGTTWR 457
>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 459
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/492 (44%), Positives = 290/492 (58%), Gaps = 38/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAVC---------LKELAAVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL Y + L+ A E+ E + LI++R A+ K+++ +D++R L I
Sbjct: 393 LL----YQDPEAFLQGDA-NNDEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNI 445
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 446 VLEDTPNGTTWR 457
>gi|419801786|ref|ZP_14327000.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|385193165|gb|EIF40546.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
Length = 459
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI GKVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q L +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLNQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVEAFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK ++ E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEEA--------EKANGLAARLRELAGILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD++ +D R +LT G
Sbjct: 394 ---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGANGTTWR 457
>gi|419845824|ref|ZP_14369087.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
gi|386414862|gb|EIJ29404.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
Length = 477
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI GKVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 20 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 79
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 80 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 139
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q L+ +AG R+ ++ K+NP DF
Sbjct: 140 IEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKNPMDF 199
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 200 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 259
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 260 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 319
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 320 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFV----DAFREAM 364
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ +LGL
Sbjct: 365 DDDFNTPNALSVLFEMA-----REINKLKTEYA--------EKANGLAARLRELAGVLGL 411
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD++ +D R +LT G
Sbjct: 412 ---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMG 462
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 463 IVLEDGSNGTTWR 475
>gi|436840386|ref|YP_007324764.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169292|emb|CCO22660.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 485
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 300/492 (60%), Gaps = 13/492 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++KE F P KV +Y CG+TAYDL H+GHAR++V FD+L RYL + +V
Sbjct: 1 MRLYNTLNRKKEEFVPADGNKVSLYACGITAYDLCHIGHARSSVVFDILVRYLRFKEYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTD+DDKII RAN+ G + L+ ++ E+ +DM L L +P+ ++H+ ++
Sbjct: 61 TFVRNFTDIDDKIINRANESGVSAAELAEKFIGEFYMDMDKLNILRADIEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AY GDV+F V YG+LSG+ +E+ ++G R+ K +P DF
Sbjct: 121 IELTKTLIEKGNAYSTASGDVYFKVRSFEGYGKLSGRNIEDLQSGARIKPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSW+SPWG GRPGWH+ECSAMS YLS FDIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWESPWGRGRPGWHLECSAMSEKYLSLPFDIHGGGQDLSFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V N+EKMSKSLGNFFTIR I E++ P LR+FL++ HYRSP
Sbjct: 241 SEAATGKEMARFWVHNGFVQINSEKMSKSLGNFFTIRDILEKFMPETLRYFLLTMHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S L+ A + +Y ++ AL + + AE I++ ++ M
Sbjct: 301 LDFSFEALEEAEKGIRRVYTAMEQMNEALQKKKWSKAALPADVLAE--IDEAEKGWNEAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD+NT+ GA I + + + K ++ + ++ +I +++K +LG+
Sbjct: 359 EDDMNTA----GAMGHIFTLIRLAGRIAEDKAWRKSEGGR-DAWVRILDDMKTWGTVLGI 413
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
P + L+ LK L+R + V +L+ R ARK+KDF++SD+IR +L G
Sbjct: 414 FTEEPKVF---LENLKLCMLERKGIEVAKVEELVAARQDARKSKDFARSDEIRDELIELG 470
Query: 496 IALMDMGKETIW 507
+ + D + W
Sbjct: 471 VDVKDTPQGPAW 482
>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|1174501|sp|P43816.1|SYC_HAEIN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 459
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEYFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+S +D R +LT G
Sbjct: 394 ---------LQQEPEKFLQAGSNDDEVAKIEALIKQRNEARTAKDWSAADSARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 459
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/492 (44%), Positives = 290/492 (58%), Gaps = 38/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL + P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL Y + L+ A E+ E + LI++R A+ K+++ +D++R L I
Sbjct: 393 LL----YQDPEAFLQGDA-NNDEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNI 445
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 446 VLEDTPNGTTWR 457
>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 459
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/492 (44%), Positives = 290/492 (58%), Gaps = 38/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL + P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEGMAKANGLAV---------RLKELAGVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL Y + L+ A E+ E + LI++R A+ K+++ +D++R L I
Sbjct: 393 LL----YQDPEAFLQGDA-NNDEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNI 445
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 446 VLEDTPNGTTWR 457
>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 459
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGSRIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD++ +D R +LT G
Sbjct: 394 ---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGANGTTWR 457
>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
Length = 463
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/502 (46%), Positives = 300/502 (59%), Gaps = 56/502 (11%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F+PI PGKV +YVCG+T YD H+GHAR V FD++ R+L EV
Sbjct: 4 LKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE L+NR+ D A L P ++PR + ++ Q+
Sbjct: 64 TYVRNITDIDDKIIKRAVENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATQYVPQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I ++ N AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P DF
Sbjct: 124 LDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLDF 183
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAK EP WDSPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P LR F++ AHY
Sbjct: 244 IAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+D P Q G A DE H
Sbjct: 304 RSPLNYSDAHLDDARQALTRLYTALKDV-----PPQAGGLVA--------------DEAH 344
Query: 375 A-----RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
A ++DD NT + F+ A + +N S + ++ +Q +K
Sbjct: 345 AVRLADALNDDFNTPVAIAVLFELANE-VNRSRSPVQARQ------------------LK 385
Query: 430 EVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
+ ILGLL PG Y LK L E ++ LI R AA+ K+F+++D+I
Sbjct: 386 ALAGILGLLQREPGEY------LKGGVAAAEGLGEAEIEALIAARKAAKAGKNFAEADRI 439
Query: 488 RADLTRKGIALMDM-GKETIWR 508
RA+LT GI L D G T WR
Sbjct: 440 RAELTEAGIILEDKPGGLTEWR 461
>gi|334705447|ref|ZP_08521313.1| cysteinyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 458
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 290/493 (58%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L + P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAETHVTCDDLTERLIGDMHQDFDALGMVRPDIEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++ AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IALVETLLEKGHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D +A + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPLAAAAGGDE-QVARFKEA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K + +++ L ++E+ +LG
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKAEDMAVAAGLGA---RLRELGAVLG- 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ + LK E EE ++ +LI ER AR +K+++ +D R LT G
Sbjct: 392 --------ILQQDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSAGKTSWR 456
>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122299286|sp|Q07ZX5.1|SYC_SHEFN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 460
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/497 (44%), Positives = 293/497 (58%), Gaps = 47/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+++ K+ F PI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL ++ EV
Sbjct: 2 LKIYNSISRDKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYIGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + E+ SL+ R E D L P ++PR + H+E+I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCESLTERLIAEMHQDFDALNMKRPDFEPRATLHIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++++ D AYV GDV F+V P YG+LSGQ L+ +AG RV +D+ KRNP DF
Sbjct: 122 IDMVQRLLDRDHAYVASNGDVLFSVASFPEYGQLSGQNLDQLQAGARVEIDNAKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLDNFFTIRDVLKHYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
LNYS L A A+ +Y L+ D V +P AE + K F +
Sbjct: 302 LNYSEDNLKQARAALERLYTALKGLDLTVDAAP-------------AEAFVAK----FKS 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F+ + +N LK + +L SL+++ + +L
Sbjct: 345 AMDDDFNTPEAYSVLFE-----MVREINRLKTTDMAEAS-ALGVSLKQLAD-------VL 391
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
GL+ +A + E ++++V + LI ER AR KD+ +D R L
Sbjct: 392 GLISQTP----------EAFFKGEGSDDEVAEIEALIVERNRARTEKDWPAADVARDRLN 441
Query: 493 RKGIALMDMGKE-TIWR 508
G+ L D G T WR
Sbjct: 442 ELGVELEDGGPSGTTWR 458
>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 456
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 290/493 (58%), Gaps = 43/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++NS++++KE+F IVPG+V MYVCG+T YD HLGHAR + FDL+YR+ + EV
Sbjct: 2 IKLFNSLSKKKEIFKSIVPGQVKMYVCGMTVYDFCHLGHARVLIVFDLIYRWFKASGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + G L+ ++ E D L + P +P+ ++ ++ +
Sbjct: 62 TYVRNITDIDDKIITRAAEQGVTYGVLTKQFIDEMNADAEALGVISPDAEPKATESIDAM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV DVF+AV K YG+LSG+ LE+ RAG RV VD K+N DF
Sbjct: 122 IIMIQGLIEKGYAYVGSNNDVFYAVSKFNGYGKLSGKSLEDLRAGNRVEVDKFKKNSFDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP W+SPWG GRPGWHIECSAMS +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPCWNSPWGKGRPGWHIECSAMSNKFLGKNFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCA--ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
S A CQ +N YW+HNG V +NEKMSKSLGNFFTIR+I Y P +R F++ A YR
Sbjct: 242 SEAFNGCQMAN--YWLHNGFVKVDNEKMSKSLGNFFTIREILNHYEPEIVRFFVLKAQYR 299
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLNYS L+ A + +Y ++ G RI+ D N +F
Sbjct: 300 SPLNYSDTHLEDAKQGLTRLYLAIR------------GNDTRIDQEI-DWKNNFASQFKD 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+ DD NTS +A+ + S N + K Q++ LI ++ IL
Sbjct: 347 ALDDDFNTS--------EAISILFSLANEVNKSNQDQEKQLLI-----------QLANIL 387
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+L E+ +L + ++ + D+ LI +R +A+KNKD+ K+D+IR L
Sbjct: 388 GIL------EMDPELFLRGNIKSSDNDIDIDLLISDRLSAKKNKDYQKADEIRIFLEGHD 441
Query: 496 IALMDMGKETIWR 508
I L D TIWR
Sbjct: 442 ILLEDTPNGTIWR 454
>gi|297582426|ref|YP_003698206.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297140883|gb|ADH97640.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 467
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/496 (42%), Positives = 303/496 (61%), Gaps = 36/496 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+++YN++T+QKE F PI GKV MYVCG T Y+ H+G+AR AV FD++ RYLE+
Sbjct: 1 MTIQLYNTLTRQKETFQPIEEGKVKMYVCGPTVYNYIHIGNARPAVVFDMVRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYV NFTDVDDKII+ AN+L E+ ++++ RY Y D L PRV++ M+
Sbjct: 61 DVTYVSNFTDVDDKIIKAANELDEDVMTVAERYIAAYYNDTEALGVRKADLHPRVTESMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I IT++I+ AY GDV+F K YG+LS Q L++ +AG R+ V+ +K +P D
Sbjct: 121 DIITFITRLIDKGYAYESSGDVYFRTRKFDTYGQLSQQSLDDLQAGARIQVEEKKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK AK GE +W SPWG GRPGWHIECSAM +L DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKTAKEGEIAWSSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLSFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YW+HNG++ +NEKMSKSL NF + I ++ P +R F+++AHYRS
Sbjct: 241 QSEALNEQRMANYWIHNGYINIDNEKMSKSLNNFILVHDIIRQFDPDVVRFFIVNAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---F 373
P+N+S QL++A ++ I T ++ L G++A + + +R E F
Sbjct: 301 PINFSDEQLETAKTSLERIQTTYENLTYRL------GESADLGGGQDKWFALIRKEGERF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M DD N+++ + F D ++ +++ + +K K+ ++E+ K +++ VL
Sbjct: 355 IASMDDDFNSANAVAVMF-DLVR--QANIYLTEKHTSKE----VLEAFLKQFDDMAFVLG 407
Query: 434 ILGLLPPGAYSEVLQQLKDKALKR-AELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
I A+KR AEL +EDV QLIEER ARK++DF+++D+IR L
Sbjct: 408 I-------------------AVKRQAELLDEDVEQLIEERIQARKDRDFARADEIRDSLK 448
Query: 493 RKGIALMDMGKETIWR 508
+GI L D + T W+
Sbjct: 449 DQGIILEDTPQGTRWK 464
>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
Length = 460
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 295/493 (59%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL++R E VD L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTDRLIGEMHVDFDSLNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVRQFKEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ + +P E+ + + F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDSNAAP-----------AGGEEYVTR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTEN--------VEKASELGALMRELADVIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LK A E+ E + LI+ R +R KD++ +D R LT G
Sbjct: 394 LHQDPEAF------LKGDAGDDEEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGSEGTTWR 458
>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
gi|189082066|sp|B0UVH6.1|SYC_HAES2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 459
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/491 (44%), Positives = 291/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL +L E+
Sbjct: 2 LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKIIRRA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIRRALENKETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q L +AG RV + K+NP DF
Sbjct: 122 IALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L+ + + F A+ A M
Sbjct: 302 LNYSEENLDLAHGALERLYTALRGTDKSAVSFGGENFIAQFTEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + ++ F+ A +N L K + K L LR E+ ILGL
Sbjct: 347 NDDFNTPNAISVLFEMA-----REINRL-KNEDKLLADGLAARLR-------ELASILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + LQ D AE+ + + +LI++R AR+ KD++++D R +LT G+
Sbjct: 394 LDQDP-EDFLQAGSDD----AEIAK--IEELIKQRNDARQAKDWARADAARNELTTMGVI 446
Query: 498 LMDMGKETIWR 508
L D T+WR
Sbjct: 447 LEDSSNGTMWR 457
>gi|323499496|ref|ZP_08104466.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323315369|gb|EGA68410.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 460
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 296/493 (60%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++++++I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I AYV + GDV F + K +YG+LS Q L+ +AG RV ++S KR+ DF
Sbjct: 122 IELVETLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLDQLQAGARVEIESAKRSSLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ ++++ PAA ED + + D
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDISV-------------PAAGGEDYVKRFTDA--- 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + + +L + E+ +V+ IL
Sbjct: 346 -MNDDFNTPEAYSVLF-DMAREIN---------RLKTEDVMAASALGALMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
P LK A E+ E + LI+ R +R KD++ +D R LT G
Sbjct: 395 HQDPEAF-------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGSEGTTWR 458
>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 459
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 TAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ I LN LK + + + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFE-----IARELNKLKTQD--------MAKANGLAARLRELAAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E++V + LI++R AR KD+ +D R LT+
Sbjct: 394 L----------QLDPEQFLQASSDEDEVAKIEALIKQRNEARVAKDWPAADAARNALTQM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIVLEDGPNGTTWR 457
>gi|148980442|ref|ZP_01816064.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
gi|145961245|gb|EDK26558.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
Length = 461
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 296/493 (60%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
+WK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VVWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDLLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASGLGALMRELADIIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LQ D A E+ E + LI+ R +R +KD++ +D R L G
Sbjct: 394 LHQDPEAF---LQ--GDAAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPEGTTWR 459
>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 459
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 292/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L E+
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVVARYLRYLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCEQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL+SAHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DTFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + ++ + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MDKANGLAARLRELAGILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A +++V + LI++R AR KD+ +D R LT+
Sbjct: 394 L----------QLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTQM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIVLEDGLNGTTWR 457
>gi|416052811|ref|ZP_11578446.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991603|gb|EGY33066.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 469
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LQLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRIVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVQKLIQRRHAYVADNGDVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNGKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DTFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E++V + LI++R AR KD++ +D R LT
Sbjct: 404 L----------QLDPEQFLQAGSNEDEVAKIEALIKQRNEARAAKDWAVADAARNALTEM 453
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 GIVLEDGPNGTTWR 467
>gi|410645940|ref|ZP_11356395.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica NO2]
gi|410134539|dbj|GAC04794.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica NO2]
Length = 464
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 285/491 (58%), Gaps = 31/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ RYL H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE +L+ R D A + L P +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AY + GDV F V +YG+LS Q LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNIGSRVDVDSGKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+D + +++ ++D + + F M
Sbjct: 302 LSYSEDNITQARSALERLYTALRDVNANI----------QVDMQSDDYLAR----FDKAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D K +N K K Q S L I + +VL IL
Sbjct: 348 DDDFNTPEAMAVLF-DVAKELN------KAKAEDQSGQSRASDLAGILLNLGKVLGILQR 400
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P SE LQ + A + AE+ LI+ R AR KD+ +D R L I
Sbjct: 401 SP----SEYLQGDQQDADEVAEIE-----ALIKARNDARAAKDWPAADAARDGLNALNII 451
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 452 LEDGPSGTTWR 462
>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 459
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/492 (44%), Positives = 291/492 (59%), Gaps = 38/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV + DV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADDDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHSGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ Q G + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSV---QVAGSEQYV------------EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I +N LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL Y + L+ A E+ E + LI++R A+ K+++ +D++R L I
Sbjct: 393 LL----YQDPEAFLQGDA-NNDEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNI 445
Query: 497 ALMDMGKETIWR 508
L D T+WR
Sbjct: 446 VLEDTPNGTMWR 457
>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 460
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 296/493 (60%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDSETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ ++ PAA E+ +++ F
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLT-------------TPAAGGEEYVSR----FTE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RIKAEDIAAASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
Y + LK A E+ E + LI+ R +R +KD++ +D R L G
Sbjct: 395 -------YQDPEAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGPEGTTWR 458
>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase, partial [Vibrio parahaemolyticus AQ3810]
gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 463
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/495 (43%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
+++ LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L
Sbjct: 1 IEIMLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYL 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
++T+VRN TD+DDKII+RA + GE+ SL+ R + D L P +PR +
Sbjct: 61 GYDLTFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQF 120
Query: 135 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ +I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+
Sbjct: 121 ISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRS 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S H
Sbjct: 241 EIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRS LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F
Sbjct: 301 YRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----F 345
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD NT + F A +N LK + +E ++ ++E+
Sbjct: 346 TAAMNDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASELGALMRELAD 392
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
++G+L Y + LK A E+ E + LI+ R +R +KD++ +D R LT
Sbjct: 393 VIGIL----YQDPEAFLKGNAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTE 446
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 447 MGIVLEDGPEGTTWR 461
>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123081502|sp|Q1LTX2.1|SYC_BAUCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 462
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 291/493 (59%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N++T +KE+F PI GKV +YVCGVTAYDL H+GH R V+FD++ RYL + EV
Sbjct: 2 LAIFNTLTNKKEIFKPIHIGKVALYVCGVTAYDLCHIGHVRTFVTFDVVIRYLRYCGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD++DKIIR+A + GE+ L++R E D+ L L P +PR + H+++I
Sbjct: 62 NYIRNITDIEDKIIRKAANNGESCQQLTDRMIAEMHHDLDLLNILRPDKEPRATQHIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ Q+I+ + AY+ GDV FA+E + NYG LS Q L + G+RV + + KRNP DF
Sbjct: 122 IQLTRQLIDKEHAYIASNGDVMFAIESANNYGILSSQNLNQLQIGQRVKITTVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQ
Sbjct: 182 VLWKMSKHGEPTWSSPWGNGRPGWHIECSAMSIKYLGKHFDIHGGGSDLIFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S + V++WMH+G VT NEKMSKSL NFFT+R + + Y +R+FLIS+HYR P
Sbjct: 242 STCMENNPYVNFWMHSGMVTICNEKMSKSLSNFFTVRDVLKYYDAETVRYFLISSHYRKP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L++ + + P E I ++F M
Sbjct: 302 LNYSEKSLQLARTALKSLYIALRNTKKEVIP-----------SGGEYFI----EQFMMAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
++D NT FQ A +N LK K K Q + +LR + N ILGL
Sbjct: 347 NNDFNTPAAHAVLFQLA-----HEVNRLKTKNIKSAQ-GMAATLRYLAN-------ILGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + LQ+ K L EE L+++R RK + ++D++R L G
Sbjct: 394 LEQDPEVF---LQKQKIVTDLNIALIEE----LVKQRNNIRKKHQWVQADKVREKLAAMG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDTPQGTIWR 459
>gi|407071860|ref|ZP_11102698.1| cysteinyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 461
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 294/493 (59%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF
Sbjct: 122 IELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + ++E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----RDINRIKTES--------IEKASALGALMRELADIIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + D A E+ E + LI+ R +R +KD++ +D R L G
Sbjct: 394 LHQDPEAFLK-----GDAAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPEGTTWR 459
>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|189082069|sp|A6VX53.1|SYC_MARMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 460
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/490 (43%), Positives = 296/490 (60%), Gaps = 35/490 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN+++ +KE+F PI GKVGMYVCG T YD H+GHARA +SFD++ R++ HL E+
Sbjct: 2 LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ SL+ R D L P +P+ ++ M++I
Sbjct: 62 NYVRNITDVDDKIIKRAEENNESTQSLTERMIAAQREDELRLGNKMPDREPKATEFMQEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ +I+ AY GDV++ K +YG+L+ ++LE+ AG R+ V+ K +PADF
Sbjct: 122 IDMVQVLIDKGFAYQGTSGDVYYRATKFKDYGKLNNRKLEDMLAGARIDVEVAKEHPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGE SW SPWG GRPGWHIECSAMS + L S FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKAGEVSWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V NNEKMSKSLGNFFT+R + +++P +R+ ++S+ YRS
Sbjct: 242 SEAATGKEYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLAKFNPEVVRYLMVSSQYRSA 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A A+ +Y L+ +VA S P + F M
Sbjct: 302 IDYSDQSLLEAKVALERLYTALRQQQVAES----------FEPTV------FTERFEEAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F+ + LN K K + SL+ + E++ + +LGL
Sbjct: 346 KDDFNTAVAVSVLFE-----LVRELN--KAKTEDANKASLLAA------ELRSLAELLGL 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L Y + L++ + L E + LI+ER ARK+K+F++SD+IR +L +GI
Sbjct: 393 L----YQDPEYFLQNSTVSEG-LGEVAIQALIDERTQARKDKNFARSDEIRDELASQGIE 447
Query: 498 LMDMGKETIW 507
L+D + T W
Sbjct: 448 LLDSREGTTW 457
>gi|359785387|ref|ZP_09288539.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359297316|gb|EHK61552.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 482
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/498 (43%), Positives = 295/498 (59%), Gaps = 31/498 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE FTP+V GKV MYVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 1 MQIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRHRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA++ GE +L+ R D A L LPP+ +PR + H+ I
Sbjct: 61 TYVRNITDIDDKILKRADENGETISALTERMIDAMHDDEARLNVLPPSREPRATGHIGDI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +P DF
Sbjct: 121 IAMIETLIDKGFAYPAKNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK E W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPTEAHWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+ WMH G V N EKMSKSLGNFFTIR + + P +R+ L+++HYRS
Sbjct: 241 SEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRYLLVASHYRSA 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGKTARIN-PAAEDCINKLRDEFH 374
+NYSV L A ++ Y L+ EV S +E T+ + A+++ + + F
Sbjct: 301 INYSVDSLVEARKSLTRFYTALEGVEVQESVGEELQQAPTSEVAFIASKEEVAAYSERFT 360
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT L F + +N K + P++ L +E R +
Sbjct: 361 TAMDDDFNTPEALAVLFD-----LAREVNRAKGESPQKALLLALELKRLAS--------V 407
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAE-----LTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
LGL LQQ D LK A+ L+E ++ I +R A+ +KDF+++D IR
Sbjct: 408 LGL---------LQQSPDTFLKGAQQHGVALSETEIEAKIAQRKEAKASKDFAQADAIRD 458
Query: 490 DLTRKGIALMDMGKETIW 507
+L GI L D + T W
Sbjct: 459 ELAALGIILKDSREGTTW 476
>gi|269468026|gb|EEZ79749.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
Length = 452
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 297/487 (60%), Gaps = 41/487 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE+F PI P KVGMYVCG+T YD H+GHAR V FD++ R+L V
Sbjct: 2 LKIYNTLSKQKEVFHPIDPNKVGMYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHFPNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ SL+NR+ D L LPP +PR +D M+Q+
Sbjct: 62 EYVRNITDIDDKIIKRAVENKEDIYSLTNRFIDAMHEDERALGVLPPDVEPRATDAMDQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY + GDV+++V YG+LSG+ L+ AG RV +++ K++P DF
Sbjct: 122 FYMIEALIEKGIAYQAKNGDVYYSVRDFEGYGKLSGKNLDELEAGARVDIETDKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS H+L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKMAKPSEPSWSSPWGDGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G V N+EKMSKSL NFFTIR + E Y LR+F++S+HYRSP
Sbjct: 242 SEGANGCTFVNTWMHVGFVNINDEKMSKSLNNFFTIRVVLESYDGETLRYFIMSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFH 374
LN+S L+ A ++ +Y ++ G +A + AA D +++ D F+
Sbjct: 302 LNFSDDNLNLAKTSLTRLYTAMR------------GLSA--SDAAMDEVSQRFDFESRFN 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A + DD NT L+ F+ A K +N L++ Q Q +L + L+K+
Sbjct: 348 AALDDDFNTPIALSILFELA-KAVN-----LQRDQDIDQANALSQLLQKL---------- 391
Query: 435 LGLLPPGAYSEVLQQLKDKALKRA-ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
G Y +LQ D LKR +L +ED+ I++R A+ KDF+ SD IR +L +
Sbjct: 392 ------GGYIGILQTDADSFLKRGVDLADEDIDAKIKQRDEAKAYKDFALSDHIRGELPK 445
Query: 494 KGIALMD 500
G+ L D
Sbjct: 446 LGLELKD 452
>gi|416893541|ref|ZP_11924691.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813831|gb|EGY30484.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 469
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDSLNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + N EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVNKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ ++ RD M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFVDAFRDA----M 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAGILGL 403
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A +++V + LI++R AR KD+ +D R LT
Sbjct: 404 L----------QLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTEM 453
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 GIVLEDGPNGTTWR 467
>gi|407692004|ref|YP_006816793.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388061|gb|AFU18554.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 459
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 288/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLDNLDLARSALERLYTSLRGCDLSVEAV-----------GGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ I +N LK + + + +KE+ +LGL
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTED--------VAKANGLAVRLKELAGVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LQ D E+ E + LI++R A+ K+++ +D++R L
Sbjct: 394 LYQDPEAF---LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMN 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDTPNGTTWR 457
>gi|357012836|ref|ZP_09077835.1| cysteinyl-tRNA synthetase [Paenibacillus elgii B69]
Length = 465
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/492 (41%), Positives = 292/492 (59%), Gaps = 29/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN++T+ KE F P+ PGKV MYVCG T Y H+G+AR + FD++ RYLE +
Sbjct: 1 MSLKIYNTLTRMKEEFKPLEPGKVKMYVCGPTVYSYIHIGNARPVIFFDVVRRYLESIGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTY NFTDVDDK+I++A ++G +++ + Q+Y D L T PRV+ +M+
Sbjct: 61 EVTYAANFTDVDDKLIKKAAEMGVTVPEVADLFVQKYYEDTKGLGVREATLHPRVTQNMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I I+ ++ D AY GDVFF K P YG+LS Q LE + G RV VD RK +P D
Sbjct: 121 EIIGFISGLVEKDYAYEAGGDVFFRTAKFPEYGKLSHQNLEELQYGIRVDVDERKESPQD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE SW SPWG GRPGWHIECSAM YL DIHGGG+DL FPHHE EIA
Sbjct: 181 FVLWKAAKPGEISWSSPWGEGRPGWHIECSAMIRKYLGDSIDIHGGGLDLTFPHHECEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS +YWMHNG V N+EKMSKSLGN + ++ + +R+F++S HYR+
Sbjct: 241 QSEGLTGQRMANYWMHNGFVNVNDEKMSKSLGNGINVHELLKTIPGEVIRYFMLSGHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLN+S ++ A ++ I ++C AL + + ++P + + +F ++
Sbjct: 301 PLNFSDEAVEQARGSLARI----ENCLSALKHRLKSAEAGEVDPEIAAAVRNAQQQFESK 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT +T F+ +N++ + ++Q L L+ L++ E + ++LG
Sbjct: 357 MNDDFNTPDAITAVFE----LVNAANPYINREQVTAPTLELL--LKQFE----AMDQVLG 406
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+L P A +L +E++ QLI ER AR+ K+++++D+IR LT +GI
Sbjct: 407 ILAPEA---------------EDLLDEEIEQLIVERTEARQAKNWARADEIRNLLTERGI 451
Query: 497 ALMDMGKETIWR 508
L D + WR
Sbjct: 452 VLEDTAQGIRWR 463
>gi|418481027|ref|ZP_13050077.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|384571373|gb|EIF01909.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 460
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 296/493 (60%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE SL+ R E D L P +PR ++++ +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGETCDSLTERLIGEMHADFDALNMKRPDIEPRATEYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F + K +YG+LS Q LE +AG RV ++S KR+ DF
Sbjct: 122 IELVQKLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLEQLQAGARVEIESAKRSSLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ +++ PAA E+ + + F
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLS-------------TPAAGGEEYVKR----FTE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RVKTEDIATASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
P LK + E+ E + LI+ R +R KD++ +D R LT G
Sbjct: 395 HQDPEAF-------LKGDSGSDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGPEGTTWR 458
>gi|410635575|ref|ZP_11346184.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
gi|410144873|dbj|GAC13389.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
Length = 458
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/494 (44%), Positives = 279/494 (56%), Gaps = 45/494 (9%)
Query: 20 KIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVT 79
+IYN++T+QKE F P+V GKVG+YVCG+T YD+ H+GHAR +SFDL+ RYL H +V
Sbjct: 3 QIYNTLTRQKETFKPLVAGKVGLYVCGITVYDVCHMGHARTYLSFDLMVRYLRHKGFDVN 62
Query: 80 YVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIK 139
YVRN TDVDDKII+RAN GE L+ R D A + L P +PRV+ H+ +I
Sbjct: 63 YVRNITDVDDKIIQRANQNGETAEQLTQRTIALMHEDFAAINLLEPDIEPRVTTHIPEII 122
Query: 140 DMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I ++I+ AY GDV F V YG+LS Q LE AGERV V S K +P DF
Sbjct: 123 DVIQRLISKGHAYQAPSGDVLFDVSTYDQYGKLSKQDLEQLNAGERVEVSSDKTDPLDFV 182
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP W+SPWG GRPGWHIECSAM++ +L + FDIHGGG DLIFPHHENE+AQS
Sbjct: 183 LWKTVKPGEPYWESPWGEGRPGWHIECSAMNSKHLGTHFDIHGGGSDLIFPHHENEVAQS 242
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
C A V+YW+H G V + EKMSKSLGNFFT+R + + Y LR+FL+SAHYRS L
Sbjct: 243 CCAFDTPYVNYWIHTGMVQVDQEKMSKSLGNFFTLRDVLKDYDAETLRYFLMSAHYRSQL 302
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+YS + A A+ +Y L+D + + G + F + M
Sbjct: 303 SYSEENIKQAKSALERLYTALRDSQPNFDVDMQQGDYLQ--------------RFESAMD 348
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT F D +K IN K Q++ L L K+ ILG L
Sbjct: 349 DDFNTPEAFAVMF-DLVKDIN--------KSHGQEKSDLAGILLKLG-------AILGFL 392
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIE----ERAAARKNKDFSKSDQIRADLTRK 494
QL A + + E D + +IE R AR +KD+ +D R LT
Sbjct: 393 ----------QLDPNAYLQGGIVESDEVSVIEGLIKARNDARADKDWIAADAARDALTAM 442
Query: 495 GIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 443 GVVLEDGANGTTWR 456
>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
Length = 497
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/498 (42%), Positives = 302/498 (60%), Gaps = 31/498 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 19 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 78
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H+E I
Sbjct: 79 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDI 138
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 139 IAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 198
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 199 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 258
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 259 EGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 317
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE +H + A E
Sbjct: 318 PLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQH----LLEKAKE-----YE 368
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F A +N+ + ++ + E++ +++ K
Sbjct: 369 EEFEAAMSDDFNTALATSSMFGLA-----KEINIYYQTVTGREGVVCQEAIAEVKRIFKF 423
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+ ++G+L + + A EE + ++ R A R K ++ +D IR
Sbjct: 424 MTEVIGILE--------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIRDR 475
Query: 491 LTRKGIALMDMGKETIWR 508
L GI + D + W+
Sbjct: 476 LAEIGITIEDSPQGARWK 493
>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418360744|ref|ZP_12961412.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688048|gb|EHI52617.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 458
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 293/493 (59%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYCGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + L+ R + D L + P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETNVTCDDLTERLIGDMHQDFDALGMVRPDVEPRATQHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I D AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVESLIAQDHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVGVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y ++R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAESVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D VA + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARFVDA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN + K + +S+ L ++E+ +LG
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN---------RQKAEDMSVAAGLGA---RLRELGAVLG- 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ D LK E EE ++ +LI ER AR +K+++ +D RA LT G
Sbjct: 392 --------ILQQDPDAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARARLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSAGKTSWR 456
>gi|417951842|ref|ZP_12594927.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
gi|342803794|gb|EGU39143.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
Length = 461
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 294/493 (59%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F V+K YG+LS Q LE +AG RV V+S KR+P DF
Sbjct: 122 IELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ + + F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F+ A +N +K + IE + + E+ I+G+
Sbjct: 347 NDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASGLGALMCELADIIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + D A E+ E + LI+ R +R +KD++ +D R L G
Sbjct: 394 LHQDPEAFLQ-----GDAAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPEGTTWR 459
>gi|350531832|ref|ZP_08910773.1| cysteinyl-tRNA synthetase [Vibrio rotiferianus DAT722]
Length = 460
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/491 (44%), Positives = 291/491 (59%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q LE +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D + +N + K + L L + E+ EV+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN---------RLKTENLEKASELGALMRELAEVIGILHQ 396
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P LK A E+ E + LI+ R +R KD++ +D R LT GI
Sbjct: 397 DPEAF-------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMGIV 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGPEGTTWR 458
>gi|375083186|ref|ZP_09730216.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742140|gb|EHR78548.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 474
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/494 (42%), Positives = 289/494 (58%), Gaps = 28/494 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+M++QKE F P+ G+V MYVCG T YD +HLGHAR ++FD++ RYLEH V
Sbjct: 1 MKVYNTMSKQKEEFKPLRDGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYTV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKIIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++ I
Sbjct: 61 LMVMNFTDIDDKIIRRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D + ++ AY V+F V K YG+LS E+ R G RV K+NP DFA
Sbjct: 121 IDFVKKLEEKGYAYEGSDGVYFEVRKYQEYGKLSKINPEDLRKGVRVEPGEGKKNPEDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+
Sbjct: 181 LWKKAKPGEPKWESPWGKGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQT 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+H G V EKMSKSLGNF TIR++ +RY +R F++ HYRSPL
Sbjct: 241 EACTGKEWVRYWLHTGFVMVKGEKMSKSLGNFVTIRELLQRYSAEVIRFFVLQKHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVAL----SPFQEHGKTARINPAAEDCINKLRDEFH 374
+Y+ + A + + +Y TL++ +AL +PF+ + + D R +F+
Sbjct: 301 DYTEEGIQHAKNNLERLYNTLENIRIALEKAETPFKWDKEEFELYEVVRDA----RKKFY 356
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ + F+ A +N L ++K PK+ LRK K V +
Sbjct: 357 EAMDDDFNTAEAMKPIFEVA-NAVNRYLEKVEK--PKES------VLRKALEFFKMVSEV 407
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
G+ + + ++ K+ + +V R+A RK K+F +D+IR++L
Sbjct: 408 FGI-----FEDYFKEAKETKEEELIELLIEV------RSALRKQKNFELADKIRSELREL 456
Query: 495 GIALMDMGKETIWR 508
GI L D + TIW+
Sbjct: 457 GIQLEDTPQGTIWK 470
>gi|332306241|ref|YP_004434092.1| cysteinyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173570|gb|AEE22824.1| cysteinyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
Length = 464
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/492 (45%), Positives = 283/492 (57%), Gaps = 33/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ RYL H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE +L+ R D A + L P +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AY + GDV F V +YG+LS Q LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDSDKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-TARINPAAEDCINKLRDEFHAR 376
L+YS + A A+ +Y L+D + + G AR + A
Sbjct: 302 LSYSEDNITQARSALERLYTALRDVNANIQVDMQSGDYLARFDKA--------------- 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D K +N K K +Q S L I + +VL IL
Sbjct: 347 MDDDFNTPEAMAVLF-DVAKELN------KAKAEEQSGHSRASDLAGILLNLGKVLGILQ 399
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
P SE LQ + A + AE+ LI+ R AR KD+ +D R L I
Sbjct: 400 RSP----SEYLQGDQQDADEVAEIE-----ALIKARNDARAAKDWPAADAARDGLNVLNI 450
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 451 ILEDGPSGTTWR 462
>gi|227329459|ref|ZP_03833483.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 461
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/497 (44%), Positives = 286/497 (57%), Gaps = 46/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A S V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ + +++ HG DEF AR
Sbjct: 302 LNYSEDNLKQARAALDRLYTALRGTDASVAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KTEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P + + Q+ D+ +K E LI++R AR KD++ +DQ R L
Sbjct: 390 VLGLLEQDPEQFLQNGAQVDDEEVKEIE-------ALIQQRKDARAAKDWALADQARDRL 442
Query: 492 TRKGIALMDMGKETIWR 508
GI L D + TIWR
Sbjct: 443 NEMGIVLEDGPQGTIWR 459
>gi|410641387|ref|ZP_11351907.1| cysteinyl-tRNA synthetase [Glaciecola chathamensis S18K6]
gi|410138920|dbj|GAC10094.1| cysteinyl-tRNA synthetase [Glaciecola chathamensis S18K6]
Length = 464
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/492 (45%), Positives = 282/492 (57%), Gaps = 33/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ RYL H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLIVRYLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE +L+ R D A + L P +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I AY + GDV F V +YG+LS Q LE G RV VDS K +P DF
Sbjct: 122 IAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDSDKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-TARINPAAEDCINKLRDEFHAR 376
L+YS + A A+ +Y L+D + + G AR + A
Sbjct: 302 LSYSEDNITQARSALERLYTALRDVNANIQVDMQSGDYLARFDKA--------------- 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D K +N K K Q S L I + +VL IL
Sbjct: 347 MDDDFNTPEAMAVLF-DVAKELN------KAKAEDQSGQSRASDLAGILLNLGKVLGILQ 399
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
P SE LQ + A + AE+ LI+ R AR KD+ +D R L I
Sbjct: 400 RSP----SEYLQGDQQDADEVAEIE-----ALIKARNDARAAKDWPAADAARDGLNALNI 450
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 451 ILEDGPSGTTWR 462
>gi|416999202|ref|ZP_11939871.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|333977355|gb|EGL78214.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 482
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/498 (42%), Positives = 302/498 (60%), Gaps = 31/498 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H+E I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 IAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE +H + A E
Sbjct: 303 PLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQH----LLEKAKE-----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F A +N+ + ++ + E++ +++ K
Sbjct: 354 EEFEAAMSDDFNTALATSSMFGLA-----KEINIYYQTVTGREGVVCQEAIAEVKRIFKF 408
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+ ++G+L + + A EE + ++ R A R K ++ +D IR
Sbjct: 409 MTEVIGILE--------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIRDR 460
Query: 491 LTRKGIALMDMGKETIWR 508
L GI + D + W+
Sbjct: 461 LAEIGITIEDSPQGARWK 478
>gi|374289282|ref|YP_005036367.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
gi|301167823|emb|CBW27408.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
Length = 487
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/495 (39%), Positives = 296/495 (59%), Gaps = 8/495 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN++++ KE F P+V GKV +Y+CG T YDL H+G+ R A++F+L+ +LE
Sbjct: 1 MSLKIYNTLSRSKEEFKPLVEGKVKLYLCGPTVYDLLHIGNFRGAITFNLVRNWLELSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V N+TDVDDKII+RAND G P+ +S +Y E+ D L T+ P+V++ M+
Sbjct: 61 DVTFVYNYTDVDDKIIKRANDEGVEPIVISEKYIAEFEKDFNRLGLKKHTHNPKVTEFMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + + +I ND AY ++G+VF+A++ +YG+LS + L+ AG+RV VDSRKRNP D
Sbjct: 121 EIINYVETLIKNDKAYEIDGEVFYAIDNYTDYGKLSKKNLDELNAGQRVEVDSRKRNPYD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEP W SPWG GRPGWHIECSAM L DIHGGGIDLIFPHHENEIA
Sbjct: 181 FVLWKPSKEGEPHWTSPWGEGRPGWHIECSAMIKAILGETIDIHGGGIDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q +YWMHN + +EKMSKSLGN T R ++YHP L+ ++SAHYRS
Sbjct: 241 QGEGCNCTKYCNYWMHNEFINLKDEKMSKSLGNVITGRAFMDQYHPEVLKFLMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
N + ++ + +Y+TL + L F E ++ ++N + + +
Sbjct: 301 NFNVTDEKIHQVISGLRRVYETLATVDTILDTF-EKSESGKVNKNFQTTLTNSDAKIKKS 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
+ DD +T+ ++ F+ F + LN+LKKK + ++ + + ++ ++ +++
Sbjct: 360 LDDDFSTAEVVATIFEVVRTF--NGLNLLKKK----KDVNSWTTAKAFKDWIQRYGQMMA 413
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L + L + D +K L E +L+L++ R AR+NKD+ K+D+ R L GI
Sbjct: 414 LFQEEPV-QFLSSIDDIMIKEKNLDREKILELVKMREEARENKDWDKADEARDALHAMGI 472
Query: 497 ALMDMGKETIWRPCV 511
D + W V
Sbjct: 473 DFSDTPEGVKWNVKV 487
>gi|417839754|ref|ZP_12485924.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
gi|341951855|gb|EGT78407.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
Length = 459
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 289/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTVQSAVAF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+S +D R +LT G
Sbjct: 394 ---------LQQEPEKFLQSGSDDDEVAKIEALIKQRNDARAAKDWSAADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|383816533|ref|ZP_09971929.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
gi|383294627|gb|EIC82965.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
Length = 462
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/491 (44%), Positives = 285/491 (58%), Gaps = 33/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R VSFD++ RYL L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV N TD+DDKII+RA + GE LS+R E D L L P +PR + H+ +I
Sbjct: 62 NYVCNITDIDDKIIKRAAENGEGFNDLSDRMIAEMHADFDSLGILRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I+ D AYV V GDV F+V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 VEIVQQLIDRDHAYVAVNGDVMFSVASDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWNSPWGNGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + + F + M
Sbjct: 302 LNYSEENLKLARTSMERLYTALR------------GTDANAQPAGGE---EFEARFRSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + P ++ + E++ + ILGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----RDINRLKSENP--------QAANGLAAELRRLAGILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E Q +A E+ E + LI++R AR +KD++ +DQ R L GI
Sbjct: 394 LAQD--PEQFLQSGAQADDNDEVAE--IETLIKQRKDARASKDWALADQARDRLNEMGIV 449
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 450 LEDGASGTTWR 460
>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429727475|ref|ZP_19262243.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429152244|gb|EKX95075.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
Length = 467
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/492 (41%), Positives = 292/492 (59%), Gaps = 29/492 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+MT++KE F P+ GKV MYVCG T Y+ HLG+AR FD L RY E+ EV
Sbjct: 1 MKVYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII+R+++ G +P ++ +Y +EY +D L T P+V+D++++I
Sbjct: 61 TYVQNFTDVDDKIIKRSHEEGISPEEVAEKYIKEYFIDCDGLGIKRATVHPQVTDNIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +++ AY GDV F + YG+LS Q +E G R+ VD +K +P DF
Sbjct: 121 ISFIQDLVDKGYAYESNGDVLFRTREFKEYGKLSHQNIEELELGARIDVDDKKEDPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP W SPWG GRPGWHIECS MS+ YL + DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKDGEPGWKSPWGEGRPGWHIECSVMSSRYLGNTIDIHAGGQDLQFPHHENEIAQS 240
Query: 259 CAACQDSNV--SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C++ +V +YWMHNG++ + EKMSKSLGNFFT+R+I E+Y +R FL+S HYR+
Sbjct: 241 --ECRNGHVFANYWMHNGYINVDGEKMSKSLGNFFTVREIAEKYDLGLVRFFLLSTHYRN 298
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S LD A + + + E +S E K + D +N + +F
Sbjct: 299 PVNFSDTILDQAKAGLERLTNARDNAEFMMSKL-EDTKMSPEETGLVDELNSYKTKFIEA 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DDLNTS ++ F+ A KF+N+++ K+ + L NE+ VL I
Sbjct: 358 MDDDLNTSDAISAIFELA-KFMNTNIKDTSSKEFIGLNIDLF-------NELTGVLNI-- 407
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+K+++ + V ++I +RA A+KNKDF+ +D+IR +L GI
Sbjct: 408 --------------ANKSVEENDDLARTVEEMIAKRAEAKKNKDFALADKIREELLEMGI 453
Query: 497 ALMDMGKETIWR 508
+ D + W+
Sbjct: 454 VIEDTRQGVKWK 465
>gi|37679546|ref|NP_934155.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
gi|37198290|dbj|BAC94126.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
Length = 509
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 295/496 (59%), Gaps = 35/496 (7%)
Query: 14 KMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEH 73
++++ LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +
Sbjct: 46 QIEIMLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRY 105
Query: 74 LKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSD 133
L ++T+VRN TD+DDKII+RA + GE SL+ R E D L P +PR +
Sbjct: 106 LGYDLTFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQ 165
Query: 134 HMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKR 192
++++I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR
Sbjct: 166 YIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKR 225
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHE
Sbjct: 226 CPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHE 285
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S
Sbjct: 286 NEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSG 345
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYRS LNYS L+ A ++ +Y +L+ + + +P E+ +++
Sbjct: 346 HYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAP-----------AGGEEYVSR---- 390
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F A M+DD NT + F D + IN + K + L+ +L + E+ +V+
Sbjct: 391 FTAAMNDDFNTPEAYSVLF-DMAREIN---------RLKTEDLANASALGALMRELADVI 440
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
IL P LK A E+ E + LI+ R +R KD++ +D R L
Sbjct: 441 GILHQDPEAF-------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLN 491
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 492 EMGIVLEDGPDGTTWR 507
>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452745743|ref|ZP_21945575.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452085882|gb|EME02273.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 458
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/494 (44%), Positives = 287/494 (58%), Gaps = 43/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL + +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I+N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS+ LD A A+ +Y L+ C+V+ EH A F M
Sbjct: 302 LDYSIDNLDLARSALERLYTALRGCDVSGEAIGEHYVEA----------------FKTAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I LN LK + K L++ +KE+ +LG
Sbjct: 346 DDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLAV---------RLKELAGVLG 391
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
L L+Q D LK +E ++ LI++R A+ K+++ +D++R L
Sbjct: 392 L---------LEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAI 442
Query: 495 GIALMDMGKETIWR 508
I L D TIWR
Sbjct: 443 NIVLEDTPNGTIWR 456
>gi|345874764|ref|ZP_08826564.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
gi|343970123|gb|EGV38321.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
Length = 470
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 291/504 (57%), Gaps = 51/504 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE F PI V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LNIYNTLTRQKEEFIPIDSKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ + D A L + P +P+ ++H++Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY + GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 LGMIQRLIDNGKAYAADNGDVYYAVREFATYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ---------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
SC A C +S+V YW+HNG + +NEKMSKSLGNFFTIR++ E+Y
Sbjct: 242 SCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEV 301
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
+R F++ AHYRSPLNYS L+ A A+ +Y L++ +P E +N A D
Sbjct: 302 VRFFILRAHYRSPLNYSDAHLNDAKGALTRLYTALKN-----TPPAEFA----VNENAND 352
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
+ F A M+DD T + F+ A N + K
Sbjct: 353 YTRR----FFAAMNDDFGTVEAIAVLFELA--------NEVNKTNS-------------- 386
Query: 425 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
NE+ L+ LG + G Q+ L+ E++ LIE+R AR K++++S
Sbjct: 387 -NELAGCLKALGSI-IGLLQRDPQEFLQGGSVSDGLSNEEIESLIEQRKQARAEKNWAES 444
Query: 485 DQIRADLTRKGIALMDMGKETIWR 508
D+IR L + I L D T WR
Sbjct: 445 DRIRDLLNAENIILEDGAGGTTWR 468
>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|61216194|sp|Q6FC71.1|SYC_ACIAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 473
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/492 (42%), Positives = 299/492 (60%), Gaps = 31/492 (6%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P PG + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKPGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWDVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ E L++R+ D A L C P P+ ++++ ++++
Sbjct: 66 IRNITDIDDKIIKRANENNETIQQLTSRFIDAMNEDAAKLGCAEPDEAPKATEYIGEMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ +++ AY GDV+F V K YGRLSG++LE+ +AG ERV ++ K++P DF
Sbjct: 126 MISTLVDKGSAYPASNGDVYFEVSKFEKYGRLSGRKLEDMQAGASERVDIEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 186 VLWKGAKPNEPSWVSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLTFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + E Q +G+ + +D + + F+ M
Sbjct: 306 VNFSDVALKEAKTALTRFYHAFKAYE------QVYGQN---DSTQKD--EQFIERFNIAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ +N LN K+Q +Q +LR + +ILGL
Sbjct: 355 RDDFNTPEAIAVLFE-----LNRELNRAVKEQQAEQAAIYYVTLRHL-------TQILGL 402
Query: 438 LPPGAYSEVLQQLK-DKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+ +V + LK D + L+++++ +I++RA A+K KDFS +D IR L +G+
Sbjct: 403 VQ----HDVDEFLKSDIGQEVLSLSDDEIQAMIQQRADAKKAKDFSGADAIRQALLDQGV 458
Query: 497 ALMDMGKETIWR 508
L D + T+WR
Sbjct: 459 VLEDTRQGTLWR 470
>gi|227112835|ref|ZP_03826491.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 461
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/497 (44%), Positives = 285/497 (57%), Gaps = 46/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A S V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ + +++ HG DEF AR
Sbjct: 302 LNYSEDNLKQARAALDRLYTALRGTDASVAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KTEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P + + Q+ D +K E LI++R AR KD++ +DQ R L
Sbjct: 390 VLGLLEQDPEQFLQNGAQVDDDEVKEIE-------ALIQQRKDARAAKDWALADQARDRL 442
Query: 492 TRKGIALMDMGKETIWR 508
GI L D + TIWR
Sbjct: 443 NEMGIVLEDGPQGTIWR 459
>gi|449144349|ref|ZP_21775164.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
gi|449079850|gb|EMB50769.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
Length = 459
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q LE +AG RV V++ KR+P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ +++ F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYLSR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTE-EDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P + AE E E + LI+ R +R KD++ +D R L
Sbjct: 395 YQEPETFFQ-----------GSAEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIVLEDSPNGTTWR 457
>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 460
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 294/491 (59%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R + D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGI 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L Y + LK A E+ E + LI+ R +R +KD++ +D R LT GI
Sbjct: 394 L----YQDPEAFLKGNAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIV 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGPEGTTWR 458
>gi|410454410|ref|ZP_11308349.1| cysteinyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
gi|409932225|gb|EKN69192.1| cysteinyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
Length = 465
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 295/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++IYN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + RYLE+
Sbjct: 1 MAIQIYNTLTRKKEAFIPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYRDF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YV NFTDVDDK+IR AN LGE+ ++++R+ Y D++ L C PRV ++M+
Sbjct: 61 AVQYVSNFTDVDDKLIRAANQLGEDVPTIADRFINAYFEDVSALGCEKADVHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I +++ D AY EGDV+F + YG+LS Q +++ + G R+ V +K++ D
Sbjct: 121 IIVDFIQKLVEKDFAYESEGDVYFRTRRFDEYGKLSHQSIDDLQVGARIEVGDKKQDDLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE WDSPWGPGRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWDSPWGPGRPGWHIECSAMAKKYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ +NEKMSKSLGNF + I +R++P LR F++S HYR+
Sbjct: 241 QSEALSGKLFSRYWMHNGYINIDNEKMSKSLGNFVLVHDIIKRHNPQVLRFFMLSVHYRN 300
Query: 317 PLNYSVLQLD---SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+NYS L+ +A + + YQ L+ + A + ++ N D I L+ F
Sbjct: 301 PINYSEELLENTKAAYERLTTSYQNLKHRKEASTDLTDN------NQEWLDKIAALQGSF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ ++ F+ + + ++ +L+K + IE + N+ +E+ R
Sbjct: 355 VEAMDDDFNTALAISVLFELSKQ---ANYYLLEKN-------TAIEVIDAFTNQFEELFR 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGL L E+ +E++ LIE+R ARK+++F SDQIR L
Sbjct: 405 VLGL----------------TLGSEEMLDEEIDALIEKRNQARKDRNFQLSDQIRDQLKE 448
Query: 494 KGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 449 MNIILEDTAQGTRWK 463
>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 462
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 293/493 (59%), Gaps = 37/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH+G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 STCAHEGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLQYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y +L+ + +++P AR A M
Sbjct: 302 LNYTEENLKQARTALERLYTSLRGTDKSVAPAGGEAFKARFCEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F I +N LK + + + + +++E+ ++LGL
Sbjct: 347 NDDFNTPEAYSVLFD-----IAREINRLKTED--------MAAANGMAAQLRELAKVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q +D AE+ + + LI++R AR++KD++ +DQ R LT G
Sbjct: 394 LEQEPEAFLQGGAQGEDD----AEVAK--IEALIKQRNDARQSKDWALADQARDALTAMG 447
Query: 496 IALMDMGKETIWR 508
+ L D T WR
Sbjct: 448 VVLEDSSAGTTWR 460
>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 459
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 289/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGADQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+ +D R +LT G
Sbjct: 394 ---------LQQDPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWPAADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|417957999|ref|ZP_12600916.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
gi|343967391|gb|EGV35636.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
Length = 470
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/504 (43%), Positives = 293/504 (58%), Gaps = 51/504 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LNIYNTLTRQKEEFIPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ + D A L + P +P+ ++H++Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY + GDV++AV + YG+LSG+ L++ RAGERV VDS KR+P DF
Sbjct: 122 LGMIQRLIDNGKAYAADNGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDSFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ---------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
SC A C +S+V YW+HNG + +NEKMSKSLGNFFTI ++ E+Y
Sbjct: 242 SCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTICEVLEKYDAEV 301
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
+R F++ AHYRSPLNYS LD A A+ +Y L++ +P E A +
Sbjct: 302 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKN-----TPPAEF--------AVSE 348
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
N F A M+DD T + F+ L + K L L+ +
Sbjct: 349 NANDYTRRFFASMNDDFGTVEAMAVLFE------------LANEVNKTNSTELAGCLKAL 396
Query: 425 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
++GLL + L+ L+ ++ L+ E++ LI +R AR K++++S
Sbjct: 397 GG-------VIGLLQ----RDPLEFLQGGSVSDG-LSNEEIESLIAQRKQARAEKNWAES 444
Query: 485 DQIRADLTRKGIALMDMGKETIWR 508
D+IR L + I L D T WR
Sbjct: 445 DRIRDLLNAENIILEDGAGGTTWR 468
>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|109894959|sp|Q3SHN1.1|SYC_THIDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
ATCC 25259]
Length = 454
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/491 (45%), Positives = 286/491 (58%), Gaps = 41/491 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I NS+T+ KE F P+ PG+V MYVCG+T YDL HLGHAR V FD++ R+L V
Sbjct: 2 LHITNSLTRTKEEFVPLSPGRVRMYVCGMTVYDLCHLGHARVFVVFDMVTRWLRASGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ E P +L+ R+ E D L LPP ++PR + ++ Q+
Sbjct: 62 EYVRNITDIDDKIIKRAHENKETPAALTERFIAEMHEDERALGVLPPDHEPRATAYVAQM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I Q+++ AY DV+++V P YGRLSG+ L+ RAGERV VD KR+P DF
Sbjct: 122 LALIAQLVDRGLAYAAPNADVYYSVRGFPAYGRLSGKSLDELRAGERVEVDPNKRDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GEP+W+SPWG GRPGWHIECSAMSA L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEPAWESPWGQGRPGWHIECSAMSAELLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YW+HNG V +NEKMSKSLGNFFTIR++ ++Y +R F++ AHYRSP
Sbjct: 242 SEGAHGCTFVNYWLHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAEIVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L+ A G PAA F M
Sbjct: 302 LNYSDAHLDDARGALTRLYTALKGAPAA-------GPVDWDAPAAA--------RFRGAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F+ A + + ++LR + ++GL
Sbjct: 347 DDDFNTPEAIAVLFELA-------------AEANRGDTGAAQTLRNLGA-------VIGL 386
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L A S+ LQ A L ++ I R AARK +DF++SD+IR +L GI
Sbjct: 387 LQRDA-SDFLQ----AGTSEAGLDASEIEARIAARQAARKARDFAESDRIRDELAAAGIV 441
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 442 LEDGPGGTTWR 452
>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 482
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/498 (42%), Positives = 303/498 (60%), Gaps = 31/498 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H+E I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 IAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P E R+ A++
Sbjct: 303 PLDFSDERLEEANKSLERLSTAIENLLYLEKCEPG--PCDE---AQRLLEKAKE----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+EF A MSDD NT+ + F A +N+ + ++ + E++ +++ K
Sbjct: 354 EEFEAAMSDDFNTALATSSMFGLA-----KEINIYYQAVTGREGVVCQEAIAEVKRIFKF 408
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+ ++G+L + + A EE + ++ R A R K + +D IR
Sbjct: 409 MTEVIGILE--------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQWGLADCIRDR 460
Query: 491 LTRKGIALMDMGKETIWR 508
L+ GI + D + W+
Sbjct: 461 LSEIGITIEDSPQGARWK 478
>gi|338533810|ref|YP_004667144.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
gi|337259906|gb|AEI66066.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
Length = 489
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/492 (43%), Positives = 302/492 (61%), Gaps = 16/492 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+MT QKEL P +PG+VG+YVCG T Y H+G+AR SFD++ RYL H +V
Sbjct: 6 IRLFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLKV 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII+ A + GE P++L+ RY + + D L L P + P+VSDH+ +I
Sbjct: 66 RYVRNFTDVDDKIIKAAAETGEAPVALAARYVEIFREDTRALHLLEPDFAPKVSDHLPEI 125
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++++ AY +GDV+F+V +Y +LS + L++ GERV +KR P DFA
Sbjct: 126 IAIIQKLVDKGHAYASQGDVYFSVSSDADYAKLSRRNLDDLCVGERVQPGEQKREPLDFA 185
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP+WDSPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQS
Sbjct: 186 LWKAAKPGEPAWDSPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQS 245
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+A S YWMH G + KMSKSLGN +R + P ALR F ++ HYR PL
Sbjct: 246 ESANGVSFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHPL 305
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A + Y Y+TL+ + +S GK P D + EF + M
Sbjct: 306 SFSDKALADAETRMEYFYETLRKVDERIS-----GKDFGKGPLHGDP-RRFFTEFESAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ L AL + +N L K P + + + +L+ + +V+ V +LGL
Sbjct: 360 DDFNTAGGLG-----ALSGLFGMMNELTDKPPVKDKALVGRTLQALREDVRRVSGVLGLF 414
Query: 439 --PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
P A+ L + +++A++ + V +L+ ER AAR KDF+ +D++R++L ++G+
Sbjct: 415 EDAPDAW---LLRRRERAVRERGIDVAAVERLLGERTAARAAKDFAAADRVRSELKQQGV 471
Query: 497 ALMDMGKETIWR 508
+MD T W+
Sbjct: 472 EIMDTPAGTTWK 483
>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|30316151|sp|Q8D8R1.2|SYC_VIBVU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 460
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/491 (44%), Positives = 294/491 (59%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE SL+ R E D L P +PR + ++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR P DF
Sbjct: 122 IELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRCPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ + + +P E+ +++ F A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDFSAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREIN---------RLKTEDLANASALGALMRELADVIGILH- 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P A+ LK A E+ E + LI+ R +R KD++ +D R L GI
Sbjct: 396 QDPDAF------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLNEMGIV 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGPEGTTWR 458
>gi|392392061|ref|YP_006428663.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523139|gb|AFL98869.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 477
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/498 (42%), Positives = 286/498 (57%), Gaps = 31/498 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+++N+M+ QKE F P GKVGMY CG T Y+ H+G+ R V FD++ RYL +
Sbjct: 1 MALRLFNTMSHQKEEFIPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDKII R ++ G +PL L+ +Y +EY D L +P + P+ +DH+
Sbjct: 61 DVTFVQNFTDIDDKIINRGHEEGRDPLELAEKYIEEYFKDAKALNLMPASIHPKATDHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + AY VEGDV+FAV+K YG+LSG+ LE+ +AG RV V RKRNP D
Sbjct: 121 EMIEIIKGLEEQGLAYAVEGDVYFAVDKLSAYGKLSGRTLEDMQAGARVEVGERKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYR
Sbjct: 241 QSEGYLHGETFARYWMHNAFLTFNQQKMSKSLGNFFTVREILEHFPGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++ L A + + +++ + AL + A + D + R EF
Sbjct: 301 SPLDFDDENLRMAQKGLERLQTSIRLADEALGRKGQACADAAADEKLRDAAEEARKEFEE 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N++ F+ + +N + P E L K + ++ +L
Sbjct: 361 AMDDDFNSALAYASLFE-----LGKVINAHVQAYPYSS-----EGLLKARGTLWKLADVL 410
Query: 436 G--LLPPG----AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
G L P A +E L+Q+ D L+E RA ARK KD+ SD IR
Sbjct: 411 GFDLANPANKVEAGNEKLEQVMD--------------LLLEVRAIARKKKDWEMSDLIRD 456
Query: 490 DLTRKGIALMDMGKETIW 507
L GI L D + W
Sbjct: 457 RLKDLGIVLEDTPQGARW 474
>gi|220904715|ref|YP_002480027.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254781675|sp|B8J0S2.1|SYC_DESDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219869014|gb|ACL49349.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 483
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/488 (43%), Positives = 287/488 (58%), Gaps = 11/488 (2%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN++ +QKE FTP+ PGKV MYVCG+TAYD H+GHAR+A+ FD+L R L H+ +VT+
Sbjct: 3 LYNTLGRQKEEFTPLRPGKVHMYVCGITAYDYCHIGHARSALVFDVLVRQLRHMGLDVTF 62
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTDVDDKII RAN G + ++ Y + DM L +PR +DH+++I+D
Sbjct: 63 VRNFTDVDDKIINRANKEGLDWREVAQTYINAFYEDMDRLGVQRADVEPRATDHIQEIQD 122
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
+ +++ AY GDV+F V P YG+LSG+ L+ +G RVA K +P DFAL
Sbjct: 123 LCAKLVAEGKAYATTSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEKEDPLDFAL 182
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAK GEPSW+SPWGPGRPGWHIECSAMS YL DIHGGG DL+FPHHENEIAQ+
Sbjct: 183 WKAAKPGEPSWESPWGPGRPGWHIECSAMSESYLP--LDIHGGGQDLVFPHHENEIAQTE 240
Query: 260 AACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLN 319
A C YW+HNG V N EKMSKSLGNF TIR I E Y P LR FL+ HYRSP++
Sbjct: 241 AVCHCHLARYWVHNGFVQVNAEKMSKSLGNFKTIRDILESYLPETLRFFLLGKHYRSPID 300
Query: 320 YSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSD 379
++ +D A A+ +Y L + + AL+ +E K + + + + M+D
Sbjct: 301 FTAEGMDEAEKALHRVYTALLETQKALT--REKWKKSPLPAQLTEDWAAQAEALDEAMND 358
Query: 380 DLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP 439
DLNT+ L F ++ +N L K + + L++ + L + G P
Sbjct: 359 DLNTAQALGHIFTQ-VRLVNRLLED-KTLRAAEAGRDLLQDFLARAEQWNTRLGLFGQQP 416
Query: 440 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 499
L L+ R + V L++ER AR NKDF++SD +R L G+++
Sbjct: 417 EA----FLADLRRIRAARRNIDIPRVEALLQERQEARANKDFARSDALRQALLDLGVSVQ 472
Query: 500 DMGKETIW 507
D + W
Sbjct: 473 DTPEGQNW 480
>gi|422336724|ref|ZP_16417697.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|353346036|gb|EHB90323.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 459
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 TAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ ++ RD M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFVDAFRDA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAGILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A +++V + LI++R AR KD+ +D R LT
Sbjct: 394 L----------QLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTEM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIVLEDGPNGTTWR 457
>gi|372270883|ref|ZP_09506931.1| cysteinyl-tRNA synthetase [Marinobacterium stanieri S30]
Length = 463
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/495 (45%), Positives = 284/495 (57%), Gaps = 42/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T K +FTPI PGK+ MYVCGVT YD H+GHAR VSFDL+ RYL +V
Sbjct: 2 LHIYNTLTNSKTVFTPIEPGKIRMYVCGVTVYDYCHIGHARVMVSFDLITRYLRARGWDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + E L+ R D L L P +PR + HM I
Sbjct: 62 DYVRNITDVDDKIIRRAAENDEQVDQLTERMIAAMHEDEERLFVLRPDQEPRATAHMGDI 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM+ ++ AY GDV++ VE+ NYGRL+ + +E+ R+G RV V+ K +P DF
Sbjct: 122 IDMVQSLVEKGYAYPASNGDVYYRVERFANYGRLTNKVIEDLRSGARVEVEEAKESPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE SWDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPGEVSWDSPWGKGRPGWHIECSAMSKCCLGETFDIHGGGPDLPFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V YWMH G V EKMSKSLGNFFTIR + E Y +R+FL S HYRS
Sbjct: 242 SEAANGCTYVHYWMHAGPVRMGTEKMSKSLGNFFTIRDVLEHYDAEVVRYFLSSVHYRSY 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A A+ YQ LQ ++ A ++ + F A M
Sbjct: 302 IDYSEDGLKEARSALERFYQALQ-------------AAGDLSTAEGGVGSEYEERFFAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQ-PKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + S LN ++Q P + L+L E+K + ++G
Sbjct: 349 DDDFNTPRALAVLFE-----LASELNKAVREQLPIAKPLAL---------ELKRLAGMIG 394
Query: 437 LLPPGAYSEVLQQLKDKALK----RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
L LQQ D LK EL E + LI++R ARK+++F+++D+IR +L
Sbjct: 395 L---------LQQDPDAFLKGEAAEGELDAEAIDSLIDKRNQARKDRNFAEADRIRDELL 445
Query: 493 RKGIALMDMGKETIW 507
+GI L D + T W
Sbjct: 446 EQGIVLKDSREGTNW 460
>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451970383|ref|ZP_21923610.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451933897|gb|EMD81564.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 460
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 294/493 (59%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDIEPRATQFIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR+P DF
Sbjct: 122 IELVQKLIERGFAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGARVDVETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTEN--------LEKASELGALMRELADVIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LK A E+ E + LI+ R +R KD++ +D R LT G
Sbjct: 394 LHQDPEAF------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGPEGTTWR 458
>gi|258621406|ref|ZP_05716440.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|262171188|ref|ZP_06038866.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
gi|258586794|gb|EEW11509.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|261892264|gb|EEY38250.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
Length = 459
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q LE +AG RV V++ KR+P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ +++ F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYLSR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTE-EDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P + AE E E + LI+ R +R KD++ +D R L
Sbjct: 395 YQEPETFFQ-----------GSAEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIVLEDGPNGTTWR 457
>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|229558612|sp|B3GXR0.1|SYC_ACTP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 459
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 288/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNEMCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS+ LD A A+ +Y +L+ C++++ E + + F A M
Sbjct: 302 LNYSLNNLDLARSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ I +N LK + + + +KE+ +LGL
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDMAKAN--------GLAARLKELAGVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LQ D E+ E + LI++R A+ K+++ +D++R L
Sbjct: 394 LYQDPEAF---LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMN 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDTPNGTTWR 457
>gi|375265152|ref|YP_005022595.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
gi|369840473|gb|AEX21617.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
Length = 460
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 294/491 (59%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLKAAP-----------AGGEEYVSR----FTNAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGI 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L Y + LK A E+ E + LI+ R +R +KD++ +D R LT GI
Sbjct: 394 L----YQDPEAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIV 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGPEGTTWR 458
>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|187629826|sp|A5UFP3.1|SYC_HAEIG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 459
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 289/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGADQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+ +D R +LT G
Sbjct: 394 ---------LQQDPEKFLQAGSDDDEVAKIEVLIKQRNEARAAKDWPVADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|83591300|ref|YP_431309.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|109894909|sp|Q2RFM3.1|SYC_MOOTA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83574214|gb|ABC20766.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 476
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 288/495 (58%), Gaps = 26/495 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN++T +KE FTP+ PG+V MYVCG T Y+ HLG+AR V FD L RYLE+ +V
Sbjct: 1 MYLYNTLTGRKEEFTPVEPGRVRMYVCGPTTYNYIHLGNARPMVVFDTLRRYLEYRNYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDK+I RA + + PL ++ RY +E+ D L T PRVS H++ I
Sbjct: 61 LYVQNFTDIDDKVINRAREEHQAPLVIAERYIEEFFKDADALNVKRATLYPRVSQHIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++ AYV +GDV+F VEK P YGRLS + RAG RV V++ KRNP DFA
Sbjct: 121 IAAIATLVERGFAYVADGDVYFEVEKFPAYGRLSKRTPGEMRAGARVEVNTSKRNPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAA GEPSW+SPWGPGRPGWHIECS M+ YL FDIHGGG DLIFPHHENEIAQ+
Sbjct: 181 LWKAACPGEPSWESPWGPGRPGWHIECSTMALKYLGPGFDIHGGGADLIFPHHENEIAQA 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +W+HNG +T N EKMSKS GNFF +R I +R+ PLA+R +L++ HYRSP+
Sbjct: 241 EAQTGCTFARFWLHNGFITVNQEKMSKSKGNFFLVRDILKRFRPLAVRLYLLATHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI----NKLRDEFH 374
++ L +A + + T + A G + PA + +LR EF
Sbjct: 301 DFDDAGLLAAERGLERLENTRRLLGEARCQLTGTGAETTV-PARTSALAGRAEELRQEFI 359
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
+ M DD NT+ L A D + INS LN P + + I E EVL
Sbjct: 360 SAMDDDFNTARAL-AALYDLAREINSYLNGTTTIDPAALRTAAI----TFEQLGGEVL-- 412
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI-EERAAARKNKDFSKSDQIRADLTR 493
G + + QQ+ D+ L ++ LI + R AR+ +D++ +D IR L
Sbjct: 413 ------GLFGQARQQVDDELLS-------GLMDLILQVRQEARQRRDWATADTIRDRLKE 459
Query: 494 KGIALMDMGKETIWR 508
GI L D + W+
Sbjct: 460 LGIVLEDTPRGPRWK 474
>gi|403059410|ref|YP_006647627.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806736|gb|AFR04374.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 461
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/497 (44%), Positives = 285/497 (57%), Gaps = 46/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A S V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ + + + HG DEF AR
Sbjct: 302 LNYSEDNLKQARAALDRLYTALRGTDASAAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KTEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P + + Q+ D+ +K E LI++R AR KD++ +DQ R L
Sbjct: 390 VLGLLEQDPEQFLQNGAQVDDEEVKEIE-------ALIQQRKDARAAKDWALADQARDRL 442
Query: 492 TRKGIALMDMGKETIWR 508
GI L D + TIWR
Sbjct: 443 NDMGIVLEDGPQGTIWR 459
>gi|334129555|ref|ZP_08503359.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
gi|333445240|gb|EGK73182.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
Length = 459
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/498 (43%), Positives = 292/498 (58%), Gaps = 50/498 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ F PI PG+V MYVCG+T YD HLGHAR V FD++ R+L V
Sbjct: 2 LKIYNTLAREKQDFVPIEPGRVRMYVCGMTVYDFCHLGHARVMVVFDMVTRWLRASDYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE +L++R+ D L L P ++PR ++ + Q+
Sbjct: 62 TYVRNITDIDDKIIRRAAENGETMRALTDRFIAAMHEDADALGVLRPDHEPRATEFVPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I ++ AY GDV ++V K YG+LSG+ L++ RAGERV V K++P DF
Sbjct: 122 QTLIQRLEAKGLAYRAASGDVNYSVRKFDGYGKLSGKSLDDLRAGERVDVIDDKQDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK AK EP+ W SPWG GRPGWHIECSAMS+ L +FDIHGGG DL FPHHENE
Sbjct: 182 VLWKHAKPAEPAEAKWASPWGDGRPGWHIECSAMSSQLLGDRFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR++ ++Y P +R F++ AHY
Sbjct: 242 IAQSEGAHGHTFVNYWMHNGFVRVDDEKMSKSLGNFFTIREVLQKYDPEVVRFFILRAHY 301
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDE 372
RSPLNYS LD A A+ +Y TL++ + PAA D
Sbjct: 302 RSPLNYSDAHLDDARGALTRLYTTLKN----------------VPPAACQPDWNTPAGSR 345
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F A M DD NT+ L F+ L + + ++ LR +
Sbjct: 346 FRAAMDDDFNTAEALAVLFE------------LSNEANRGNDAAVAGELRALAG------ 387
Query: 433 RILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+LGLL P + LK +A + L + + LI +R AA+K +DF+ +D++R +
Sbjct: 388 -VLGLLERSPEDF------LKGRA-QAGGLDDAQIEALIAQRVAAKKARDFATADRVRDE 439
Query: 491 LTRKGIALMDMGKETIWR 508
L ++GI L D T WR
Sbjct: 440 LKQQGIILEDSAAGTTWR 457
>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|417320155|ref|ZP_12106701.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|31076996|sp|Q87QJ9.1|SYC_VIBPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 460
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 294/491 (59%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R + D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGI 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L Y + LK A E+ E + LI+ R +R +KD++ +D R LT GI
Sbjct: 394 L----YQDPEAFLKGNAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIV 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGPEGTTWR 458
>gi|297579367|ref|ZP_06941295.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|417825068|ref|ZP_12471656.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|422909615|ref|ZP_16944258.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|422923151|ref|ZP_16956313.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429886116|ref|ZP_19367682.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
gi|297536961|gb|EFH75794.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|340046553|gb|EGR07483.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|341634699|gb|EGS59448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|341644386|gb|EGS68602.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429227010|gb|EKY33067.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
Length = 459
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/496 (43%), Positives = 291/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
P +A + +ED Q LI+ R +R KD++ +D R L
Sbjct: 395 YQEP-------------EAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 EMGIVLEDGPNGTTWR 457
>gi|406894538|gb|EKD39329.1| hypothetical protein ACD_75C00439G0007 [uncultured bacterium]
Length = 490
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/491 (40%), Positives = 293/491 (59%), Gaps = 6/491 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T++I+N+++ QKE+ I PG V +YVCG+T+YD H+GHAR+A++FD++ YL++
Sbjct: 1 MTIRIHNTLSGQKEILQTIEPGHVKLYVCGITSYDYCHIGHARSALAFDMIVNYLKYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRNFTD+DDKII RA + + L+ R+ E+ VDM L P +P+ ++H+
Sbjct: 61 KVTYVRNFTDIDDKIIARAKEQQTSSEELAARFINEFYVDMDRLGINRPDIEPKATEHIT 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ D+I +++ AY DV++ V+ P YG+LS + + +AG R++V+ +KRNP D
Sbjct: 121 EMIDLIGELVGKGKAYPSGNDVYYVVDSFPGYGKLSKRNPADMQAGARISVNEQKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEP+W SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKGSKPGEPTWASPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S HYR+
Sbjct: 241 QSEGANGKPFATTWIHHGFVTIRDEKMSKSLGNFLTIRDILSHYHPEILRFFIFSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S + A+ + +Y+ L + S ++ + + + + F
Sbjct: 301 PLDFSESAMQDATAGLERLYECLAAVDRLDSGKRDSALPSVLTENDLRQLKGMETRFQQA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M +D NT+ G F D +K S+N + +K P I+ L+ ++++ I+G
Sbjct: 361 MDNDFNTAQA-QGVFFDTVK----SINRICRKLPATPSAGDIQFLKNGAETLRKLADIMG 415
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+L A + L K+K + L + LI ER R K++++ D+IR L + I
Sbjct: 416 ILREDA-NTFLAAGKNKKISEGGLNVAAIETLIAERYECRLAKNWARGDEIRDLLLAQNI 474
Query: 497 ALMDMGKETIW 507
L D T W
Sbjct: 475 ELKDGPAGTTW 485
>gi|260768877|ref|ZP_05877811.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|375131397|ref|YP_004993497.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
gi|260616907|gb|EEX42092.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|315180571|gb|ADT87485.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
Length = 460
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 294/493 (59%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E+ SL+ R QE D L P +PR + ++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENQESCESLTERLIQEMYADFDALNIKRPDVEPRATAYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I+ AYV + GDV F V K +YG+LS Q L+ +AG RV +D KR+P DF
Sbjct: 122 IELVQRLIDRGFAYVADNGDVMFEVNKFDDYGKLSKQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ ++ + PAA E+ + + F
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDMTV-------------PAAGGEEYLTR----FTT 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F A +N LK + + +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLFDMA-----REVNRLKTEDTDKAS-----ALGALMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
Y + LK A E+ E + LI+ R +R +KD++ +D R L G
Sbjct: 395 -------YQDPEAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLNEMG 445
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 446 IVLEDGPSGTTWR 458
>gi|209527155|ref|ZP_03275668.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|376001627|ref|ZP_09779490.1| cysteinyl-tRNA synthetase [Arthrospira sp. PCC 8005]
gi|209492404|gb|EDZ92746.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|375330014|emb|CCE15243.1| cysteinyl-tRNA synthetase [Arthrospira sp. PCC 8005]
Length = 486
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 299/501 (59%), Gaps = 25/501 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FT + PGKV MY CGVT YD HLGHAR+ ++D++ RYLE
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA + ++S R+ Y D+ L PRV+DH++
Sbjct: 61 EVNYVQNFTDIDDKILNRAKEQESTMEAVSQRFIDAYFEDLRRLNVRDAKAYPRVTDHIK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----R 190
+I +I Q+ AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +
Sbjct: 121 EIHQLIEQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPH
Sbjct: 181 KKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFL 309
HENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F+
Sbjct: 241 HENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFI 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINK 368
+ HYR PL+++ + SA + ++TL+D + + G +A +P+ D
Sbjct: 301 LQGHYRKPLDFTDEAIASAKNG----WETLKDGLLFAEQYGARLGWSADSSPSKYDTTED 356
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
F M DD NT L F+ A K + N+L + I + K +
Sbjct: 357 ALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTPSDRIYATWKT---L 412
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
E+ + GL E + Q + A + +++ ++ L+++R +ARK K++++ D+IR
Sbjct: 413 VELAGVFGL-------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKNYAEGDRIR 464
Query: 489 ADLTRKGIALMDM-GKETIWR 508
L G+ L+D G ET+WR
Sbjct: 465 DQLQANGVTLIDRPGGETLWR 485
>gi|335424982|ref|ZP_08553974.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
gi|334886972|gb|EGM25316.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
Length = 462
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/491 (42%), Positives = 292/491 (59%), Gaps = 33/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++++S++ Q++ + P V +YVCGVTAYD HLGHAR + FD+ RYL + V
Sbjct: 2 IELHDSLSGQRQPLKTLEPDHVRLYVCGVTAYDYCHLGHARVMIVFDMFVRYLRAIGWRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE P ++S R+ + D A L P+ +P + H++QI
Sbjct: 62 TYVRNVTDIDDKIINRANETGETPEAISTRFTEAMREDEAALGLKAPSAEPTATGHVDQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I N AY + GDV++ V NYG LSG+RL + RAGER+AV+ K +P DF
Sbjct: 122 IAMIERLIENGAAYASDNGDVYYDVSTFDNYGALSGRRLADLRAGERIAVNEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSWDSPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPDEPSWDSPWGQGRPGWHIECSAMSTHCLGASFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+ WMHNG VT ++EKMSKSLGNF TIR + +Y ++R+F++S HYRSP
Sbjct: 242 SEAATGQRYVTTWMHNGFVTVDDEKMSKSLGNFLTIRDVLAKYDAESVRYFVLSTHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L Y+V +D+A+ A+ +Y L+D ++P N A + + F M
Sbjct: 302 LAYNVDAMDAATSALSRLYTALRD----VAP----------NDAQSEAADAYEARFTDAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DDLNT + F+ M + Q +Q ++ I + + +GL
Sbjct: 348 ADDLNTPAAIAVLFE-----------MARDCQRLKQD--DCQAAGAIAARLALLAGRIGL 394
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + Q L+ + + +++ER AR K+F+++D+IR LT + I
Sbjct: 395 L-----EQSPQVFLQGHAGEEGLSADTIEAMLQERRDARAAKNFARADEIRDALTAQNIV 449
Query: 498 LMDMGKETIWR 508
L D T+WR
Sbjct: 450 LEDGPDGTLWR 460
>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
gi|226710839|sp|B6EH43.1|SYC_ALISL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
Length = 462
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/495 (43%), Positives = 295/495 (59%), Gaps = 41/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E+ +L+ R E D L+ P +PR ++++ +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENNESCEALTERLIAEMHADFDALKMKRPDVEPRATEYITEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
+++ ++I AYV GDV F V+K YGRLS Q LE +AG RV ++ S KR+
Sbjct: 122 VELVERLIERGFAYVASNGDVMFEVKKFDEYGRLSRQDLEQLQAGSRVTLEETSVKRSGM 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLMFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYR
Sbjct: 242 AQSCCAHDAKYVNTWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDSETVRYFLMSGHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L+ A ++ +Y +L+ ++ ++P E + + F
Sbjct: 302 SQLNYSEENLNQARSSLERLYTSLRGLDLTVTP-----------AGGETFVTR----FST 346
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F+ A +N LK + IE+ K+ ++E+ +L
Sbjct: 347 AMNDDFNTPEAYSVLFEMA-----REVNRLKTEN--------IEAASKLGALMRELAEVL 393
Query: 436 GLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GLL P A+ L+ + E+ E + LI+ R AR KD+S +D R +T
Sbjct: 394 GLLSQEPEAF------LQGDSGSDNEVAE--IEALIKARNDARAAKDWSAADAARDAITA 445
Query: 494 KGIALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 LNIVLEDGPEGTTWR 460
>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123356646|sp|Q12L98.1|SYC_SHEDO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 459
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 290/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNSM+++K+ F PI PGK+GMYVCG+T YDL H+GH R VSFD++ RYL +L EV
Sbjct: 2 LKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ RN TDVDDKII+RA + E+ +L+ R E D L + P ++P+ + HM +I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCDALTERLTAEMHKDFDALNMVRPDFEPKATLHMPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++++ AYV +GDV F+V YGRLSGQ ++ +AG RV +D K+NP DF
Sbjct: 122 IEMVQRLLDRGHAYVAPDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEIDHNKQNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLKHYDAQTVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +D ++ ++ A++ + K F + M
Sbjct: 302 LNYSEDNLKQARSALERLYTAFKDLDLTVTA-----------APADEYVTK----FKSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D ++ IN + K + +L ++ +VL I+
Sbjct: 347 NDDFNTPEAYSVLF-DMVREIN---------RLKTTDMGAASALGVSMKQLADVLGIV-- 394
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
S ++ + E+ E + LI ER AR KD++ +D R L + G+
Sbjct: 395 ------SVDIETFFKGSGSDDEVAE--IEALIVERNRARTEKDWAAADVARDRLNQLGVV 446
Query: 498 LMDMGKETIWR 508
L D T W+
Sbjct: 447 LEDGENGTTWK 457
>gi|91226019|ref|ZP_01260946.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269968727|ref|ZP_06182720.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
gi|91189460|gb|EAS75737.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269826654|gb|EEZ80995.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
Length = 460
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 295/493 (59%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTEN--------LEKASELGALMRELADVIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LK A E+ E + LI+ R +R KD++ +D R LT G
Sbjct: 394 LHQDPEAF------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGPEGTTWR 458
>gi|320156698|ref|YP_004189077.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
gi|56749448|sp|Q7MLR5.2|SYC_VIBVY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319932010|gb|ADV86874.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
Length = 460
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 291/491 (59%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE SL+ R E D L P +PR + ++++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR P DF
Sbjct: 122 IELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRCPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ + + +P E+ +++ F A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDFSAAP-----------AGGEEYVSR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREIN---------RLKTEDLANASALGALMRELADVIGILHQ 396
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P LK A E+ E + LI+ R +R KD++ +D R L GI
Sbjct: 397 DPEAF-------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLNEMGIV 447
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 448 LEDGPDGTTWR 458
>gi|421351582|ref|ZP_15801947.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
gi|395952027|gb|EJH62641.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
Length = 459
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/496 (43%), Positives = 290/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F I +N L K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLFD-----IAREINRL-----KSEDMTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
P +A + +ED Q LI+ R +R KD++ +D R L
Sbjct: 395 YQEP-------------EAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 EMGIVLEDGPNGTTWR 457
>gi|417840824|ref|ZP_12486932.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
gi|341950635|gb|EGT77222.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
Length = 459
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 289/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++A YRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVEAFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+S +D R +LT G
Sbjct: 394 ---------LQQEPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWSAADAARNELTVMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|386265553|ref|YP_005829045.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
Length = 459
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 289/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + F M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGEN----FAETFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTED--------VEKANGLAVRLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD++ +D R +LT G
Sbjct: 394 ---------LQQDPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 459
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 283/491 (57%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++ ++KE+FTPI P +VGMYVCGVT YDL H+GH R VSFD++ RYL +L +
Sbjct: 2 LKIFNTLKREKEIFTPIHPNQVGMYVCGVTVYDLCHIGHGRTFVSFDVIARYLRYLGYHL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENHETCEHLVDRMVAEMYKDFDALNIQRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+N AYV + GDV F V+ P YG+LS Q L +AG RV ++ K+NP DF
Sbjct: 122 IALVQRLIDNGHAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQAGARVEINDIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGGAYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLQHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A A + + + F A M
Sbjct: 302 LNYSEENLKLAHSALERLYTALR------------GTDANATAAGGE---QFIEAFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L+ F A LN LK +Q Q ++E+ +LGL
Sbjct: 347 DDDFNTPGALSVLFDMA-----RELNKLKAEQNPQTD--------AFAARLRELAGVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + + D K E LI +R AR NKD++ +D R L G+
Sbjct: 394 LYQDPETFLQAGMDDDETKIIE-------TLIAQRNQARANKDWATADAARDKLAAMGVV 446
Query: 498 LMDMGKETIWR 508
+ D T WR
Sbjct: 447 IEDGANGTTWR 457
>gi|229515228|ref|ZP_04404688.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
gi|229347933|gb|EEO12892.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
Length = 459
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 290/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AY+ + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYIADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F I +N L K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLFD-----IAREINRL-----KSEDMTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
P +A + +ED Q LI+ R +R KD++ +D R L
Sbjct: 395 YQEP-------------EAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 EMGIVLEDGPNGTTWR 457
>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
Length = 488
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/495 (42%), Positives = 298/495 (60%), Gaps = 26/495 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +K +F P+VPG+V +YVCGVT Y+ H+G+AR AV++D++ RYL+H+ +V
Sbjct: 11 IKVYNTLTGEKTVFRPLVPGEVKIYVCGVTPYNHPHIGNARPAVTWDVICRYLKHIGYKV 70
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII +AN G + ++S+RY Y M + PRVSDHM+ I
Sbjct: 71 EFVQNFTDVDDKIINKANAEGSDWKTISDRYIDAYFQVMDAMHVRRADVYPRVSDHMQDI 130
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DM+ +I+ AYV+ DV++ + +YG LSG+++++ AG R+ V+ KRNP DFA
Sbjct: 131 IDMVQGLIDKGHAYVLGNDVYYDISTFEHYGALSGRKIDDMLAGARIEVNEGKRNPGDFA 190
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIAQS
Sbjct: 191 LWKGAKPGEPFWESPWGKGRPGWHIECSAMSVHYLGKTFDFHGGGSDLIFPHHENEIAQS 250
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C C+ V+YW+HNG +T N+EKMSKSL NFF + + + Y ALR+FL+S YR+
Sbjct: 251 EGCTGCK--FVNYWLHNGFITINSEKMSKSLNNFFLAKDVLKEYSGDALRYFLLSVQYRN 308
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTAR-INPAAEDCINKLRDEFH 374
PL+YS +LD A + + ++ E+A E +R + AAE+ + FH
Sbjct: 309 PLDYSRDRLDEAEKNMERLSGVIRRLKELAAKEGAEKTDASRSLEKAAEESLKA----FH 364
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT + TGA D K IN + E++ K +K ++ I
Sbjct: 365 EAMDDDFNTG-LATGAMFDLAKAINIYGTAVDGGLSVDH-----EAVEKAYTALKTIMDI 418
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI-EERAAARKNKDFSKSDQIRADLTR 493
LG +L+++ +K + + D++ +I R ARK K + +D+IR L
Sbjct: 419 LG---------ILEEVWEKTDSPDDKSYNDLMDIILAVRQTARKEKMYKIADEIRDRLDA 469
Query: 494 KGIALMDMGKETIWR 508
GI + D W+
Sbjct: 470 AGIVIEDTPTGARWK 484
>gi|258626834|ref|ZP_05721641.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
gi|258580881|gb|EEW05823.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
Length = 459
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 292/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q LE +AG RV V++ KR+P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ G R+ PAA E+ +++ F A
Sbjct: 302 LNYSEENLNQARASLERLYNALR------------GLDRRV-PAAGGEEYLSR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTE-EDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P + AE E E + LI+ R +R KD++ +D R L
Sbjct: 395 YQEPETFFQ-----------GSAEDEEAEQIEALIKLRNDSRAVKDWANADMARDKLNEM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIVLEDCPNGTTWR 457
>gi|156974130|ref|YP_001445037.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
gi|388600078|ref|ZP_10158474.1| cysteinyl-tRNA ligase [Vibrio campbellii DS40M4]
gi|156525724|gb|ABU70810.1| hypothetical protein VIBHAR_01842 [Vibrio harveyi ATCC BAA-1116]
Length = 460
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 295/493 (59%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q LE +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ +++ + A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----YTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTEN--------LEKASELGALMRELADVIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LK A E+ E + LI+ R +R KD++ +D R LT G
Sbjct: 394 LHQDPEAF------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGPEGTTWR 458
>gi|341926027|dbj|BAK53927.1| cysteinyl-tRNA synthetase [Chitiniphilus shinanonensis]
Length = 459
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/494 (44%), Positives = 291/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+++++KE+F PIVPGKV MYVCG+T YD HLGHAR V FD++ R+L V
Sbjct: 2 LNLYNTLSREKEVFRPIVPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYAV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE+ +L+ R+ D L L P ++PR ++ + +
Sbjct: 62 DYVRNITDIDDKIIKRALENGESINALTQRFIDAMNEDADALGVLRPDHEPRATEFVGAM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY GDV++AV K YG+LSG+ L++ RAGERV VD K++P DF
Sbjct: 122 HQMIGRLIDNGLAYSAPNGDVYYAVRKFDGYGKLSGKSLDDLRAGERVDVDPNKQDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAKA EP+ WDSPWG GRPGWHIECSAMS H+L + FDIHGGG DL FPHHENE
Sbjct: 182 VLWKAAKADEPADAKWDSPWGAGRPGWHIECSAMSCHHLGAHFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+YWMHNG + +NEKMSKSLGNFFTIR++ ++Y +R F++ AHY
Sbjct: 242 IAQSEGASGQRYVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFILRAHY 301
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS + LD A +A+ +Y L K + D + F
Sbjct: 302 RSPLNYSDMHLDDARNALTRLYTAL--------------KAVPADAVTLDWQSPYAARFK 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + F L + +QQ +L L+ + VL +
Sbjct: 348 AAMDDDFNTTEAVAVLFD------------LAHEANRQQSPALAGELKALAG----VLGL 391
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LG P Q + E + E + I R AAR K++++SD+IR +L
Sbjct: 392 LGREP--------QAFLQAEVGEGEWSAERIEAAIAARKAARAAKNWAESDRIRDELAAA 443
Query: 495 GIALMDMGKETIWR 508
G+ L D + T WR
Sbjct: 444 GVVLEDGAQGTGWR 457
>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 459
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 283/491 (57%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+ ++K+ F PI PGKV +YVCG+T YD HLGHAR V FD + R+ E V
Sbjct: 2 LKIYNSIAREKQDFVPITPGKVKLYVCGMTVYDYCHLGHARVLVVFDTVVRWFEANDFTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ +L+ R+ Q D L PT++P + H++ +
Sbjct: 62 NYVRNITDIDDKIIKRAQENNESIEALTQRFIQAMNEDSVALGVSSPTHEPCATHHVKSM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI+ ++ + AY GDV+F+V P YG+LSG+ L + RAGERV +DS K++P DF
Sbjct: 122 IGMISTLVEKNLAYQAHNGDVYFSVHNFPGYGKLSGKSLNDLRAGERVDIDSSKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK+GEP W+SPWGPGRPGWHIECSAM +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKSGEPFWESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG V +NEKMSKSLGNFFT+R+I + Y P +R F++ AHYRSP
Sbjct: 242 SEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKLYQPEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A+ +Y L++ E I+ A D +F M
Sbjct: 302 LNYSDQHLKDTKLALDRLYIALKEVE-------------PISVARVDWNYPYAQKFKRAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A S +N ++ +L L ++ +E L+
Sbjct: 349 DDDFNTPDAIALLFDLA-----SDINKTGSREHAGLLKALGGLLGLLQQNPQEYLQ---- 399
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
A SE+ + DV QLI+ER ARK +S +D IR L +GI
Sbjct: 400 -NKAASSEL------------NSSAHDVEQLIQERINARKEGRYSDADTIRKQLQEQGII 446
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 447 LEDSSQGTTWR 457
>gi|423062587|ref|ZP_17051377.1| cysteinyl-tRNA synthetase [Arthrospira platensis C1]
gi|406715922|gb|EKD11074.1| cysteinyl-tRNA synthetase [Arthrospira platensis C1]
Length = 486
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 299/501 (59%), Gaps = 25/501 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FT + PGKV MY CGVT YD HLGHAR+ ++D++ RYLE
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA + ++S R+ Y D+ L PRV+DH++
Sbjct: 61 EVNYVQNFTDIDDKILNRAKEQESTMEAVSQRFIDAYFEDLRRLNVRDAKAYPRVTDHIK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----R 190
+I +I Q+ AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +
Sbjct: 121 EIHQLIDQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPH
Sbjct: 181 KKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFL 309
HENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F+
Sbjct: 241 HENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFI 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINK 368
+ HYR PL+++ + SA + ++TL+D + + G +A +P+ D
Sbjct: 301 LQGHYRKPLDFTDEAIASAKNG----WETLKDGLLFAEQYGARLGWSADSSPSKYDTTED 356
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
F M DD NT L F+ A K + N+L + I + K +
Sbjct: 357 ALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTPSDRIYATWKT---L 412
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
E+ + GL E + Q + A + +++ ++ L+++R +ARK K++++ D+IR
Sbjct: 413 VELAGVFGL-------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKNYAEGDRIR 464
Query: 489 ADLTRKGIALMDM-GKETIWR 508
L G+ L+D G ET+WR
Sbjct: 465 DQLQANGVTLIDRPGGETLWR 485
>gi|153830573|ref|ZP_01983240.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|229520308|ref|ZP_04409734.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|229529129|ref|ZP_04418519.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|254292163|ref|ZP_04962934.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|417821192|ref|ZP_12467806.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|419830317|ref|ZP_14353802.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|419837569|ref|ZP_14361007.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|421343906|ref|ZP_15794309.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|421354512|ref|ZP_15804844.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|422307789|ref|ZP_16394944.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|422917697|ref|ZP_16952015.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|423735520|ref|ZP_17708717.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|423822603|ref|ZP_17716613.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|423855994|ref|ZP_17720418.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|423882868|ref|ZP_17724005.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|423956069|ref|ZP_17734908.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|423985139|ref|ZP_17738457.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|423998127|ref|ZP_17741379.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|424009862|ref|ZP_17752799.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|424017020|ref|ZP_17756850.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|424019945|ref|ZP_17759731.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|424625311|ref|ZP_18063772.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|424629797|ref|ZP_18068084.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|424633841|ref|ZP_18071941.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|424636921|ref|ZP_18074929.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|424640833|ref|ZP_18078716.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|424648900|ref|ZP_18086563.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|443527820|ref|ZP_21093869.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
gi|148873935|gb|EDL72070.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|150421926|gb|EDN13902.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|229332903|gb|EEN98389.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|229342674|gb|EEO07666.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|340038823|gb|EGQ99797.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|341636579|gb|EGS61273.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|395939986|gb|EJH50667.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|395953637|gb|EJH64250.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|408012740|gb|EKG50509.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|408018373|gb|EKG55826.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|408023551|gb|EKG60712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|408024210|gb|EKG61335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|408033180|gb|EKG69738.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|408055353|gb|EKG90286.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|408618993|gb|EKK92040.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|408620090|gb|EKK93102.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|408629831|gb|EKL02495.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|408634579|gb|EKL06814.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|408640897|gb|EKL12679.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|408640992|gb|EKL12773.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|408657928|gb|EKL29003.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|408664537|gb|EKL35371.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|408852482|gb|EKL92304.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|408856117|gb|EKL95812.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|408860082|gb|EKL99733.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|408863657|gb|EKM03131.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|408867039|gb|EKM06401.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|443453692|gb|ELT17510.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
Length = 459
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/496 (43%), Positives = 291/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
P +A + +ED Q LI+ R +R KD++ +D R L
Sbjct: 395 YQEP-------------EAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 EMGIVLEDGPNGTTWR 457
>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
Length = 504
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/492 (43%), Positives = 299/492 (60%), Gaps = 16/492 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+MT QKEL P +PG+VG+YVCG T Y H+G+AR SFD++ RYL H +V
Sbjct: 21 IRLFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLKV 80
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII+ A + GE P+ L+ RY + + D L L P + PRVSDH+ +I
Sbjct: 81 RYVRNFTDVDDKIIKAAAETGEAPVELAARYVEIFREDTRALHLLEPDFSPRVSDHLPEI 140
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++++ AY +GDV+F+V +Y +LS + L+ GERV +KR P DFA
Sbjct: 141 IAIIQKLVDKGHAYASQGDVYFSVSSDEDYAKLSKRNLDELCVGERVQPGEQKREPLDFA 200
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP+W+SPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQS
Sbjct: 201 LWKAAKPGEPAWESPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQS 260
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+A + YWMH G + KMSKSLGN +R + P ALR F ++ HYR PL
Sbjct: 261 ESANGVTFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHPL 320
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A + Y Y+TL+ + +S GK P D + EF + M
Sbjct: 321 SFSDKALADAETRMEYFYETLRKVDERIS-----GKDFGKGPLHGDP-QRFFTEFESAMD 374
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ L +L + +N L K P + + + +L + +V+ V +LGL
Sbjct: 375 DDFNTAGGL-----GSLSGLFGMMNELTDKPPVKDKALVGRTLHALREDVRRVSSVLGLF 429
Query: 439 --PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
P A+ L + +++A++ + +V +L+ ER AAR KDF+ +D++R++L KG+
Sbjct: 430 EDAPDAW---LLRRRERAVRERGIDVAEVERLLGERTAARAAKDFAAADRVRSELKEKGV 486
Query: 497 ALMDMGKETIWR 508
+MD T W+
Sbjct: 487 EIMDTPAGTTWK 498
>gi|426404249|ref|YP_007023220.1| hypothetical protein Bdt_2270 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860917|gb|AFY01953.1| hypothetical protein Bdt_2270 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 482
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 289/491 (58%), Gaps = 16/491 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS ++Q E FTP+ PG+V MYVCG T Y+ H+G+ R V F+++ +LE+L +V
Sbjct: 2 LKIHNSQSKQLEDFTPLTPGQVKMYVCGPTVYNFLHVGNFRGPVVFNMVRNWLENLGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY NFTDVDDKII RAN+LG P LS +Y EY D A L P P+V++HM+ I
Sbjct: 62 TYALNFTDVDDKIINRANELGMTPTELSEKYIAEYKKDFAMLGLRPHDMNPKVTEHMDDI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ M+ +++ AY +GDV +++E +YG+LSG+ ++ AG RV VD +KRNP DFA
Sbjct: 122 RSMVENLVSQKKAYEAQGDVLYSIESFKDYGKLSGRNTDDLLAGARVEVDEKKRNPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GE SW SPWGPGRPGWHIECSAM + + DIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKAAKPGEVSWPSPWGPGRPGWHIECSAMIKNLFGDQIDIHGGGMDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ V YWMHN + +KMSKSLGN T+R+ E Y+ + ++SAHYR+
Sbjct: 242 EGCTGKAFVKYWMHNNMLNFGGQKMSKSLGNIVTMREFLEMYNAEIYKWMILSAHYRTLS 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSP--FQEHGKTARINPAAEDCINKLRDEFHAR 376
++ ++ A + +Y L E L+P QE A+I +D K+ +
Sbjct: 302 DFGDEAVERAVGGLSRVYSALSMAESYLTPEVTQEDAAFAKI---TQDAWKKVEEA---- 354
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+ D T F+ +F N+ + K P Q +L N V+++ +
Sbjct: 355 MNHDFGTPDAFAAMFEVVRQF-NAQVRRGMKVNPAIQGKAL-----AFHNFVRKMGSTMS 408
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L A++ L +L D LK+ L V L+ ER AR KDF+KSD++RA +T GI
Sbjct: 409 LFQEPAHA-FLIKLDDMLLKKMNLERSAVDTLVAERGEARAAKDFAKSDELRAKITALGI 467
Query: 497 ALMDMGKETIW 507
++ D + + W
Sbjct: 468 SVSDTPEGSFW 478
>gi|251799666|ref|YP_003014397.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247547292|gb|ACT04311.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 470
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/495 (41%), Positives = 292/495 (58%), Gaps = 30/495 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++IYN++T+ KE F P PGKV MYVCG T YD H+G+AR + FD++ RYLE+
Sbjct: 1 MNVQIYNTLTRSKEAFVPQEPGKVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLEYAGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V Y+ NFTDVDDK+I++A LG +++++ + D+A L T PRV++H+
Sbjct: 61 DVNYIVNFTDVDDKLIKKAEQLGLTVPEVADKFINAFNEDIASLGVHKATLNPRVTEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I +++ AY EGDV++ K YG+LS Q LE + G R+ V RK NP D
Sbjct: 121 SIIAFIQGLVDTGYAYASEGDVYYRTSKFEEYGKLSHQNLEELQFGIRIEVGERKENPQD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK K GE +W+SPWGPGRPGWHIECSAM+ YL DIHGGG DL FPHHE E+A
Sbjct: 181 FVLWKGVKPGEINWESPWGPGRPGWHIECSAMAREYLGDTLDIHGGGHDLQFPHHECEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A +YWMHNG++ NNEKMSKSLGN T+ ++ +R P A+R+F++S HYRS
Sbjct: 241 QSEALTGKQLANYWMHNGYIHINNEKMSKSLGNGITVNELVKRVKPAAIRYFILSTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLN++ + A ++V I + + LS F + A D I +L+ +F A+
Sbjct: 301 PLNFTDETIAQAENSVDRIANCAANLKHRLSTFDGQSEGAAAGELG-DRIAQLKAQFEAK 359
Query: 377 MSDDLNTSHILTGAFQ---DALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT +T F+ +A +++N + + +L+ +L ++
Sbjct: 360 MGDDFNTPDAITAVFELVTEANQYMN------RADASSEGIAALLAALEQMNT------- 406
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGLLP +A AEL ++++ LI ER AR K+++++D+IR LT
Sbjct: 407 VLGLLP-------------EAGTDAELLDDEIDALIVERTEARAAKNWARADEIRNLLTE 453
Query: 494 KGIALMDMGKETIWR 508
KGIAL D + WR
Sbjct: 454 KGIALEDTPQGIRWR 468
>gi|269960838|ref|ZP_06175209.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|424032917|ref|ZP_17772333.1| cysteine--tRNA ligase [Vibrio cholerae HENC-01]
gi|269834502|gb|EEZ88590.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|408875278|gb|EKM14429.1| cysteine--tRNA ligase [Vibrio cholerae HENC-01]
Length = 460
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 294/493 (59%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ +P E+ + + F A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGEEYVTR----FTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTEN--------LEKASELGALMRELADVIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LK A E+ E + LI+ R +R KD++ +D R LT G
Sbjct: 394 LHQDPEAF------LKGDAGDDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGPEGTTWR 458
>gi|423197293|ref|ZP_17183876.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404630981|gb|EKB27617.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 458
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 294/494 (59%), Gaps = 43/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R V+FD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + G L+ R + D L + P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +++ + AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNYS L A A+ +Y L+D E A + E + AR A
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPEAAAAGGDE--QVARFKEA--------------- 344
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F D ++ IN + K + +++ L ++E+ +LG
Sbjct: 345 MDDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVAAGLGA---RLRELGAVLG 391
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+LQQ D LK E +E ++ +LI ER AR +K+++ +D RA LT
Sbjct: 392 ---------ILQQDPDAFLKGDEADDEVAEIERLITERNQARADKNWAAADAARARLTEM 442
Query: 495 GIALMDMGKETIWR 508
GI L D +T WR
Sbjct: 443 GIVLEDSAGKTSWR 456
>gi|399910862|ref|ZP_10779176.1| cysteinyl-tRNA synthetase [Halomonas sp. KM-1]
Length = 476
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 283/494 (57%), Gaps = 30/494 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE FTPI PGKV MYVCG+T YD HLGHAR V+FD++ RYL +V
Sbjct: 1 MQIYNTLTRRKEPFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVAFDVVTRYLRWRDFDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA++ GE SL+ R D A L L P +PR + H+ +I
Sbjct: 61 TYVRNITDIDDKILKRADENGETIASLTERMIAAMHEDEARLGVLRPDREPRATGHVSEI 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I+ Y GDV++ V K YG+L+ + L+ RAG RV VD K +P DF
Sbjct: 121 IAMVETLIDKGYGYPAANGDVYYRVRKFEGYGKLNNRNLDEMRAGARVDVDEHKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE SW SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEASWPSPWGEGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+ WMH G V N EKMSKSLGNFFTIR++ E + P +R+ L+++HYRSP
Sbjct: 241 SEAATGKPYVNTWMHAGAVRVNQEKMSKSLGNFFTIREVLEVHDPEVVRYLLVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NY+ L A ++ Y L V ++ + A+ D F M
Sbjct: 301 INYAPESLADARKSLERFYNALDGVGVG---GKDEKTIQKERALAKAVYGDFEDRFIVAM 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ L+ F + LN KK+ K + +E+K + +LGL
Sbjct: 358 DDDFNTAEALSVLFD-----LARELNRAKKEATKLAP--------GLAHELKRLGGVLGL 404
Query: 438 LPPGAYSEVLQQLKDKALKRAE----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
LQQ + LK L+E ++ I RA A+K +DF+ +D IR +L
Sbjct: 405 ---------LQQQPEAFLKGGAGELPLSESEIEAKIVARAEAKKARDFAAADGIRDELAT 455
Query: 494 KGIALMDMGKETIW 507
GI L D + T W
Sbjct: 456 LGIVLKDSREGTSW 469
>gi|229523866|ref|ZP_04413271.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
gi|229337447|gb|EEO02464.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
Length = 459
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/496 (43%), Positives = 291/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
P +A + +ED Q LI+ R +R KD++ +D R L
Sbjct: 395 YQEP-------------EAFFQGSAEDEDAAQIEALIKLRNDSRAAKDWANADLARDKLN 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 EMGIVLEDGPNGTTWR 457
>gi|384424847|ref|YP_005634205.1| cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
gi|327484400|gb|AEA78807.1| Cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
Length = 459
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/496 (43%), Positives = 290/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
P +A + +ED Q LI+ R +R KD++ +D R L
Sbjct: 395 YQEP-------------EAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 EMGIVLEDGPNGTTWR 457
>gi|424807047|ref|ZP_18232455.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
gi|342324989|gb|EGU20769.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
Length = 459
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 290/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVGPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q LE +AG RV V++ KR+P DF
Sbjct: 122 IALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ +++ F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYLSR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTE-EDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P + AE E E + LI+ R +R KD++ +D R L
Sbjct: 395 YQEPETFFQ-----------GSAEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIVLEDGPNGTTWR 457
>gi|342215232|ref|ZP_08707886.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
gi|341588729|gb|EGS32105.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
Length = 482
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/499 (45%), Positives = 297/499 (59%), Gaps = 33/499 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N+MT++K +F P+ G+V +YVCGVT Y+ H+G+AR V++D + RYL H+ +V
Sbjct: 4 LTVFNTMTREKSVFQPVKEGEVSIYVCGVTPYNHPHIGNARPFVTWDTIRRYLSHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY++NFTDVDDKII +N G +S+RY Y M L PRVS HME+I
Sbjct: 64 TYIQNFTDVDDKIINTSNGEGVAWNVISDRYIDAYYDVMDALHVRRADVYPRVSTHMEEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MIT +I+N AY V+GDV++ VEK +YG+LSG+ L++ AG RV VD RK NP DFA
Sbjct: 124 ISMITTLIDNGYAYAVDGDVYYRVEKFEHYGKLSGRTLDDMEAGARVDVDDRKENPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGQGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C + + V YW+HNG +T N EKMSKSL NFF ++ I E+Y ALR FL+S HYRS
Sbjct: 244 -EGCSEHHPAVRYWVHNGFITINQEKMSKSLNNFFLVKDILEQYSADALRFFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR---DEF 373
PL++S +LD A+ A+ +QT+ D + L E A + + R +EF
Sbjct: 303 PLDFSDERLDEATKAI-ERFQTVIDNLLYLESRPE----GLCELEAAELLKNARNYEEEF 357
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A MSDD NT+ + T K IN ++ S I +++I K +L
Sbjct: 358 EAAMSDDFNTA-LATAPIYGLAKEINIYYQSVQSCDGTVCH-STIGEVKEI---FKMMLD 412
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE----RAAARKNKDFSKSDQIRA 489
ILGLL G K E + E+ QL+E R AR+ K + +D IR
Sbjct: 413 ILGLLEEG-------------WKGQETSNEEYNQLMEVILNIRQCAREQKQWGIADSIRD 459
Query: 490 DLTRKGIALMDMGKETIWR 508
+L GI + D + W+
Sbjct: 460 ELANIGIIIEDSPQGARWK 478
>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Bermanella marisrubri]
gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
Length = 460
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 288/493 (58%), Gaps = 38/493 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++++QKE F P+ PGK+GMYVCG+T YD H+GHAR VSFD++ RYL H
Sbjct: 1 MALQIYNTLSRQKEEFKPLQPGKIGMYVCGMTVYDFCHMGHARVMVSFDVIVRYLRHKGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V Y+RN TD+DDKII+RA + GE L +R D A L L P +PR + H++
Sbjct: 61 DVNYIRNITDIDDKIIQRAAENGEPFEQLVDRMVDAMNEDFAKLNILTPNSEPRATQHID 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I M+ +I AY + GDV++ V K YG+LSG+ LE +G R+AV+ K +P
Sbjct: 121 GIIKMVETLIEKGFAYAAKNGDVYYRVRKFDGYGKLSGKILEELESGARIAVEEEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK+AK EPSWDSPWG GRPGWHIECS MS L + FDIHGGG DL FPHHENEI
Sbjct: 181 DFVLWKSAKPEEPSWDSPWGQGRPGWHIECSVMSTCCLGNNFDIHGGGPDLKFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + + WMH G + + EKMSKSLGNFFTIR I E+Y +R FL S YR
Sbjct: 241 AQSEAATGEHYANTWMHAGALRIDGEKMSKSLGNFFTIRDILEKYDAEVIRFFLSSVQYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S +NYS L A + +Y + C++ +A I+ + + R+ F A
Sbjct: 301 SAINYSEDGLKDAEAKLDRLYNAIHGCDL----------SAVIDE-QDAVVQDTRERFEA 349
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F D + IN KK+ ++ L+ + + E+ IL
Sbjct: 350 AMDDDFNTPKAIAVLF-DLVNEIN------KKEGAEKNPLAAL---------LVELSSIL 393
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRK 494
G LQ D L+R ++ +Q I+ERA A+K+KDF+ +D+IR DL +
Sbjct: 394 G---------CLQSDPDNYLQRGVTLDDAYIQGKIQERAQAKKDKDFALADKIREDLDAQ 444
Query: 495 GIALMDMGKETIW 507
GI L D + T W
Sbjct: 445 GIILQDSREGTTW 457
>gi|417846323|ref|ZP_12492331.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
gi|341952725|gb|EGT79246.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
Length = 459
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 288/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ +R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAETVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVATFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ + +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFE-----MVREINKLKTEDA--------EKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD+S +D R +LT G
Sbjct: 394 ---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWSAADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|386818264|ref|ZP_10105482.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386422840|gb|EIJ36675.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 461
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 290/496 (58%), Gaps = 44/496 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYNS+T+QKE F PI P +V MYVCG+T YD HLGHAR V FD +YRYL+ V
Sbjct: 2 LHIYNSLTRQKETFHPIHPRQVFMYVCGMTVYDYCHLGHARVMVVFDTVYRYLKASGYLV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE +L+ R+ D A L L P +PR + ++ ++
Sbjct: 62 QYVRNITDIDDKIIKRAAENGEPIEALTARFIDAMHEDEAALNVLRPDDEPRATSNIPEM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++ AY GDV++ V K YG+LSG++LE+ RAGERVAVD K +P DF
Sbjct: 122 LAMIQTLLDKGLAYQGSNGDVYYDVSKFDGYGKLSGRKLEDMRAGERVAVDEIKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKA+K GEP+WD+PWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKASKPGEPAWDAPWGAGRPGWHIECSAMSQKLLGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +V+YWMHNG + N+EKMSKSLGNFFTIR++ + Y A+R F++++HYRS
Sbjct: 242 SEGCTGHKHVNYWMHNGFIRVNDEKMSKSLGNFFTIREVLQHYRAEAVRFFILNSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY+ QLD+A+ ++ +Y L+ E + + E+ + F A
Sbjct: 302 LNYATDQLDAANASLSRLYTALRGLPEAGAANYTEYER-----------------RFDAA 344
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F+ A I +R ++E
Sbjct: 345 MDDDFNTPEAIAVMFELARD---------------------INRIRTEQSEGAAAPLGAL 383
Query: 437 LLPPGAYSEVLQQLKDKALKRAE----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
L G +LQ ++ LK + L++ D+ LI++R AAR K++ +SD+IR +L
Sbjct: 384 LKLLGKALGILQDNPEEWLKGSAGADGLSDADIDALIQQRLAARAAKNWGESDRIRDELK 443
Query: 493 RKGIALMDMGKETIWR 508
KG+ L D T WR
Sbjct: 444 TKGVILEDSAGATSWR 459
>gi|262404192|ref|ZP_06080747.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
gi|262349224|gb|EEY98362.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
Length = 459
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/498 (44%), Positives = 290/498 (58%), Gaps = 50/498 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENSETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLDQLQAGARVDVEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RTVPAAGGEEYLTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + L+ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDLTNASALGSLMCELADVIGIL 394
Query: 436 -----GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
GA E +Q++ LI+ R +R KD++ +D R
Sbjct: 395 YQEPEAFFQGGAEDEEAEQIE---------------ALIKLRNDSRAAKDWANADMARDK 439
Query: 491 LTRKGIALMDMGKETIWR 508
L GI L D T WR
Sbjct: 440 LNEMGIVLEDGPNGTTWR 457
>gi|444427437|ref|ZP_21222819.1| cysteinyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239314|gb|ELU50884.1| cysteinyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 460
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 294/493 (59%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V K YG+LS Q LE +AG RV +++ KR+P DF
Sbjct: 122 IELVAKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++ P E+ +++ + A M
Sbjct: 302 LNYSEDNLNQARASLERLYTSLRGLDLNAVP-----------AGGEEYVSR----YTAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +E ++ ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKTEN--------LEKASELGALMRELADVIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LK A E+ E + LI+ R +R KD++ +D R LT G
Sbjct: 394 LHQDPEAF------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IVLEDGPEGTTWR 458
>gi|291567546|dbj|BAI89818.1| cysteinyl-tRNA synthetase [Arthrospira platensis NIES-39]
Length = 486
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/501 (42%), Positives = 299/501 (59%), Gaps = 25/501 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FT + PGKV MY CGVT YD HLGHAR+ ++D++ RYLE
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA + +S R+ Y D+ L PRV+DH++
Sbjct: 61 EVNYVQNFTDIDDKILNRAKEHDSTMEEVSQRFIDAYFEDLRRLNVRDANAYPRVTDHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----R 190
+I +I + AY V+GDV+++V P+YG+LS ++LE+ + G RVAV +
Sbjct: 121 EIHQLIDTLTATGHAYAVDGDVYYSVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPH
Sbjct: 181 KKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFL 309
HENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F+
Sbjct: 241 HENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFI 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINK 368
+ HYR PL+++ + SA++ ++TL+D + + G + +P D
Sbjct: 301 LQGHYRKPLDFTDEAIASANNG----WETLKDGLLFAQQYGAPLGWSDDSSPGKYDTTED 356
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
F M DD NT L F+ A K + N+L + Q I ++ K +
Sbjct: 357 ALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTQSDRIYAIWKT---L 412
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
E+ + GL E + Q + A + +++ ++ L+++R +ARK K++++ D+IR
Sbjct: 413 VELAGVFGL-------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKNYAEGDRIR 464
Query: 489 ADLTRKGIALMDM-GKETIWR 508
L G+ L+D G ET+WR
Sbjct: 465 DQLQASGVTLIDRPGGETLWR 485
>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 487
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/508 (41%), Positives = 286/508 (56%), Gaps = 53/508 (10%)
Query: 16 DLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
++ + +YN++T+QKE F P+ P V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 14 NMPITLYNTLTRQKEEFVPLNPENVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHG 73
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
+TYVRN TD+DDKII RAN+ GE L+ R+ D L L P +P+ ++H+
Sbjct: 74 YPLTYVRNITDIDDKIIARANENGETIGELTARFIAAMNEDSDALGVLRPDIEPKATEHI 133
Query: 136 EQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNP 194
Q+ MI ++ N AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P
Sbjct: 134 GQMIAMIEDLVANGKAYPAPNGDVYYAVREFAEYGQLSGKSLDDLRAGERVDVDANKRDP 193
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWKAAK GEPSW+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENE
Sbjct: 194 LDFVLWKAAKPGEPSWESPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENE 253
Query: 255 IAQSCAA----CQ-----------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 299
IAQSC A C +S+V YW+HNG + +NEKMSKSLGNFFTIR + ++
Sbjct: 254 IAQSCGAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKK 313
Query: 300 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 359
Y P +R F++ AHYRSPLNYS LD A +++ +Y TL + + A +E
Sbjct: 314 YAPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLGNVQAAEFAVREDA------ 367
Query: 360 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 419
N F A M DD NT+ ++ F+ L + K L
Sbjct: 368 -------NDYTRRFFAAMDDDFNTAEAMSVLFE------------LANEANKTGSAELAG 408
Query: 420 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 479
L+ + LGLL + Q + L+ +++ LI +R AR+ K
Sbjct: 409 CLKALGG-------TLGLL-----QDDPQHFLQSGGEEGGLSADEIEALITQRKTARETK 456
Query: 480 DFSKSDQIRADLTRKGIALMDMGKETIW 507
++++SD+IR L I L D T W
Sbjct: 457 NWAESDRIRDLLAEHKILLKDGADGTTW 484
>gi|422009692|ref|ZP_16356675.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414093510|gb|EKT55182.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 462
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/500 (43%), Positives = 291/500 (58%), Gaps = 51/500 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIGEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV GDV F V+ PNYG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNY+ L A A+ +Y L+ + + P DEF AR
Sbjct: 302 LNYTEENLKQARTALERMYTALRGTDKSAVPAGG-------------------DEFKARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F D ++ +N + K + +S ++ +++E+
Sbjct: 343 IEAMNDDFNTPEAYSVLF-DMVREVN---------RLKSEDMSAANAMAA---QLRELAG 389
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEED-----VLQLIEERAAARKNKDFSKSDQIR 488
+LGL L+Q + LK TE+D + LI++R AR+NKD++++D R
Sbjct: 390 VLGL---------LEQDPESFLKGGAQTEDDAEVAKIEALIQQRLDARQNKDWAQADAAR 440
Query: 489 ADLTRKGIALMDMGKETIWR 508
+LT G+ L D T WR
Sbjct: 441 DELTAMGVVLEDGATGTTWR 460
>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452121220|ref|YP_007471468.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451910224|gb|AGF82030.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 461
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + + +P AR A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKGEDMTAAN-AMASHLRKISG-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R LT G
Sbjct: 394 LEQEPDVFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWTAADAARDRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 469
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/498 (44%), Positives = 288/498 (57%), Gaps = 44/498 (8%)
Query: 16 DLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLK 75
D LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +
Sbjct: 9 DFMLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSG 68
Query: 76 CEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM 135
+ YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+
Sbjct: 69 YNLRYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHI 128
Query: 136 EQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNP 194
+I M+ ++I+N AYV +GDV F VE YG LS Q LE +AG RV + S K+NP
Sbjct: 129 PEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKNP 188
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK +KAGEPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENE
Sbjct: 189 MDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENE 248
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQSC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHY
Sbjct: 249 IAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHY 308
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF-QEHGKTARINPAAEDCINKLRDEF 373
RS L+YS+ LD A A+ +Y L+ C+V+ EH A F
Sbjct: 309 RSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGGEHYVEA----------------F 352
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVL 432
M DD NT L F+ I LN LK + K L++ +KE+
Sbjct: 353 KTAMDDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLAV---------RLKELA 398
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRAD 490
+LGL L+Q D LK +E ++ LI++R A+ K+++ +D++R
Sbjct: 399 GVLGL---------LEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDK 449
Query: 491 LTRKGIALMDMGKETIWR 508
L I L D TIWR
Sbjct: 450 LKAINIVLEDTPNGTIWR 467
>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123131947|sp|Q0I1Q1.1|SYC_HAES1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 459
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/491 (44%), Positives = 290/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL +L E+
Sbjct: 2 LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKIIRR+ + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIRRSLENRETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F VE YG+LS Q L +AG RV + K+NP DF
Sbjct: 122 IALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L+ + + F A+ A M
Sbjct: 302 LNYSEENLDLAHGALERLYTALRGTDKSAVAFGGENFIAQFTEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + ++ F+ A +N L K + K L LR E+ ILGL
Sbjct: 347 NDDFNTPNAISVLFEMA-----REINRL-KNEDKLLADGLAARLR-------ELAGILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + LQ D AE+ + + LI++R AR+ KD++++D R +LT G+
Sbjct: 394 LEQDP-EDFLQAGSDD----AEIAK--IEALIKQRNDARQAKDWARADAARNELTTMGVI 446
Query: 498 LMDMGKETIWR 508
L D T+WR
Sbjct: 447 LEDGSNGTMWR 457
>gi|190568970|ref|ZP_03021871.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|190559894|gb|EDV13878.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
Length = 465
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE FTP+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ +++NR+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIANRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|229917379|ref|YP_002886025.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
gi|259511833|sp|C4KZR7.1|SYC_EXISA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229468808|gb|ACQ70580.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
Length = 465
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/498 (43%), Positives = 291/498 (58%), Gaps = 44/498 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YNS+T +KE F PIVPGKV MYVCG T Y+ H+G+AR A++FD + RYL + EV
Sbjct: 2 IQLYNSLTNKKEPFVPIVPGKVSMYVCGPTVYNYIHVGNARPAIAFDTVRRYLTYRGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKIIR AN+LGE+ +L+NRY + YL D L P PRV+D ME+I
Sbjct: 62 KYVLNFTDVDDKIIRTANELGEDTETLTNRYIEAYLADTGALNVQPADVHPRVTDTMEEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I Q+ AY EGDV+F +K YG+LS Q +E+ RAG RV V +K +P DF
Sbjct: 122 IEFIRQLETEGFAYESEGDVYFRTKKFETYGKLSQQSIEDLRAGSRVDVGEKKEDPLDFV 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK EPSWDSPWG GRPGWHIECSAM+ +L + DIH GG DL FPHHENEIAQS
Sbjct: 182 LWKAAKPDEPSWDSPWGKGRPGWHIECSAMAKKHLGTTIDIHAGGHDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +YW+HNG + NEKMSKSLGNF + + + P+ LR F++S HYR P+
Sbjct: 242 EACNHAKFANYWLHNGFINIENEKMSKSLGNFLLVHEALKEVDPMVLRFFMLSVHYRHPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
NYS ++ A++ I + Q+ E LS TA + A+E KL + F
Sbjct: 302 NYSRELIEQAANGWSRIKEAYQNIEYRLSV------TAGLGEASESMERKLESIKASFIE 355
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKK-----KQPKQQQLSLIESLRKIENEVKE 430
M DD+NT++ +T F A N+ K K +Q LSL + E
Sbjct: 356 SMDDDINTANAVTVLFDLA-----REANIYAKADHVAKATLEQVLSLFD----------E 400
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+ +LGL + EL + ++ QLI+ER AR ++F+++D+IR
Sbjct: 401 LTGVLGL---------------TLAEEKELLDAEIDQLIQERNDARAARNFARADEIRDL 445
Query: 491 LTRKGIALMDMGKETIWR 508
L + I L D + W+
Sbjct: 446 LKEQNIQLEDTAQGVRWK 463
>gi|387771057|ref|ZP_10127229.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902976|gb|EIJ67797.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 459
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 281/491 (57%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL L +
Sbjct: 2 LKIFNTLTREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RN TDVDDKII+RA + E L R E D L L P +PR + HM +I
Sbjct: 62 RFIRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHMPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +I AYV +GDV F VE NYGRLS Q LE +AG RV + S K+NP DF
Sbjct: 122 IAMVEALIKRGHAYVAADGDVMFDVESYQNYGRLSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWESPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T N EKMSKSL NFFTIR I +Y ++R+F ++A YRS
Sbjct: 242 SCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDSESVRYFFLTAQYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+ C+ + P ++ + + F M
Sbjct: 302 LDYSEENIGLARKALERLYTALRGCDFNVKM-----------PESDQYV----EAFKEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F A +N LK + I ++ + +K++ +LGL
Sbjct: 347 DDDFNTPGALAVLFDLA-----REINKLKTEN--------INEANRLSSRLKQLAGVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L S + D + + E QLI++R AR KD++++D R +LT GI
Sbjct: 394 LEQDPESFLQGDTADDEVAKIE-------QLIKQRNEARAAKDWAQADAARNELTAMGIV 446
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 447 LEDGANGTTWR 457
>gi|260779213|ref|ZP_05888105.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605377|gb|EEX31672.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
Length = 460
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/495 (44%), Positives = 299/495 (60%), Gaps = 43/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV V+S KR+P DF
Sbjct: 122 IELVEKLIERGFAYVADNGDVMFEVGQFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y +L+ ++ + PAA E+ + + F
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLTV-------------PAAGGEEYVKR----FTE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K +Q S + SL ++E+ ++
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN------RIKNDNLEQASAMGSL------MRELADVI 391
Query: 436 GLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
G+L P A+ LK A E+ E + LI+ R +R +KD++ +D R LT
Sbjct: 392 GILHQEPEAF------LKGDAGNDDEVAE--IEGLIKLRNDSRASKDWANADMARDKLTE 443
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 444 MGIVLEDGPEGTTWR 458
>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470557|sp|B1XUY8.1|SYC_POLNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 473
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/509 (43%), Positives = 290/509 (56%), Gaps = 58/509 (11%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++ K++F PIVPGKV MYVCG+T YD H+GHAR + FD++ R+L EV
Sbjct: 2 LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RA + GE +L+NR+ D +L + P +PR +D++ Q+
Sbjct: 62 LYVRNITDIDDKIINRAIENGEPISALTNRFVDAMHADSDELGLMHPDQEPRATDYIAQM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ MI ++I N+ AY +GDV FAV P YG+LSG+ L+ AGERVAV KR+P DF
Sbjct: 122 QGMIGKLIENELAYQANDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAVGDGKRDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AK EP+ W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENE
Sbjct: 182 VLWKSAKPEEPADTRWKSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSN--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 306
IAQS A + V+YWMHNGH+ N EKMSKSLGNFF IR + + + P +R
Sbjct: 242 IAQSEGALYGKDRKVDDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVIR 301
Query: 307 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 366
F++ HYRSP+NYS QL+ A + +Y L A + NP A+
Sbjct: 302 FFMLKTHYRSPINYSDAQLEEARSGLVRLYTALAQGSKAQTI-----SLGSSNPWAK--- 353
Query: 367 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
F M+DD NT + F ++ + + +
Sbjct: 354 -----RFADAMNDDFNTPEAIAVLF------------------------DIVSEVNRAQG 384
Query: 427 EVKEVL-RILGLLPPGAYSEVLQQ-----LKDKALKRAELTEEDVLQLIEERAAARKNKD 480
E K+VL IL L GA LQ+ L+ A +A L+ E + + I R AA++ KD
Sbjct: 385 EEKQVLANILKAL--GASLNFLQRDPTVFLQSSAKDQAGLSPEQIEEQIAARVAAKQAKD 442
Query: 481 FSKSDQIRADLTRKGIALMDM-GKETIWR 508
F+K+D IR L +GI L D G T WR
Sbjct: 443 FAKADAIRKALLEQGIVLEDKPGGLTGWR 471
>gi|50122074|ref|YP_051241.1| cysteinyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
gi|61216191|sp|Q6D2E4.1|SYC_ERWCT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49612600|emb|CAG76050.1| cysteinyl-RNA synthetase [Pectobacterium atrosepticum SCRI1043]
Length = 461
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 281/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI +VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHADQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNITDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ + YG LS Q L+ RAG RV + KRNP DF
Sbjct: 122 IEMVETLITRRHAYVASNGDVMFSVDTASGYGVLSRQDLDQLRAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++ + HG ++ FH M
Sbjct: 302 LNYSEDNLKQARAALERLYIALRGTDPSV---EAHGG------------DEFEARFHDAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N L K + Q L +LRK+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRL-KAEDVQAANQLASTLRKLSG-------VLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q+ D +K E LI++R AR KD++ +DQ R L G
Sbjct: 394 LEQDPEQFLQNGAQVNDDEVKEIE-------ALIQQRKDARATKDWALADQARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDGPQGTIWR 459
>gi|169830402|ref|YP_001716384.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
gi|229558630|sp|B1I0T1.1|SYC_DESAP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169637246|gb|ACA58752.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
Length = 478
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 291/495 (58%), Gaps = 24/495 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++I+N++T +KE F P PG+V +YVCG T Y+ HLG+ARA V FD + RY + V
Sbjct: 1 MQIFNTLTGRKETFCPRDPGRVSIYVCGPTTYNFIHLGNARALVVFDTIRRYFLYKGYRV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y++NFTDVDDKII R+ + G +P +L+ +Y EY VD L P+VSDH+ +I
Sbjct: 61 LYIQNFTDVDDKIINRSREEGIDPQTLAAKYVDEYFVDADALNVRRADVHPKVSDHIPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+IT II+ AYV GDV+FAV K YGRLS + L++ AG RV V +KR+P DFA
Sbjct: 121 IALITMIIDRGLAYVAGGDVYFAVRKFGGYGRLSKRSLDDLLAGARVEVGEQKRDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKPGEPWWESPWGRGRPGWHIECSAMALKYLGTGFDIHGGGADLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+HNG +T EKMSKSLGN F +R++T Y P ALR FL+S HYR+PL
Sbjct: 241 EGATGEPFARYWIHNGFITIREEKMSKSLGNVFLVRELTRLYPPEALRLFLLSNHYRNPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVAL---SPFQEHGKTARINPAAEDCINKLRDEFHA 375
+Y ++++ AV + L +L +P + G R+ E + L+ F A
Sbjct: 301 DYDPEAMEASVRAVNRLKTCLGLLRESLDRPAPDGDGGGGNRL----EAVLEVLQGRFEA 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSL--NMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + D +N+ L N + Q+ L L ++ R
Sbjct: 357 AMDDDFNTA-LAQAVMFDLTHEVNTYLHQNDRPSRGALQKALDLFDAFN----------R 405
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LG+ P VL+ +L++ + LI R AR+NKDF+ +D+IR L
Sbjct: 406 VLGIFPEHKGRIVLE----AGAVSGDLSQGLLDLLIALRQDARRNKDFATADRIRDGLRA 461
Query: 494 KGIALMDMGKETIWR 508
GI L D + W+
Sbjct: 462 LGILLEDTPQGVRWK 476
>gi|410690165|ref|YP_006963884.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
gi|389597466|gb|AFK90217.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
Length = 463
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/495 (44%), Positives = 285/495 (57%), Gaps = 40/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN+ T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNTYTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
++ +I AY+ E GDV F+V P+YG+LS Q LE ++G+RV D KRN
Sbjct: 122 INITETLIRRGHAYIAENGDVMFSVSTDPDYGKLSRQDLEQLQSGDRVRTDVVDVKRNSM 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYR
Sbjct: 242 AQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L A A+ +Y +L+ + +++P AR A
Sbjct: 302 SQLNYSEENLKQARSALERLYTSLRGTDKSVAPAGGEAFEARFIEA-------------- 347
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F A +N LK + + LRK+ +L
Sbjct: 348 -MDDDFNTPEAYSVLFDMA-----REVNRLKSVDMAEAN-GMASHLRKLSG-------VL 393
Query: 436 GLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GLL P A+ + + D + EL LI++R ARK K++S +D R L
Sbjct: 394 GLLEQEPEAFLQSGVKTGDAEVAEIEL-------LIQQRLDARKAKNWSAADSARDRLNE 446
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 447 MGIVLEDGPQGTTWR 461
>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|81336945|sp|Q4QPG7.1|SYC_HAEI8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 459
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 288/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKTEDA--------EKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD++ +D R +L G
Sbjct: 394 ---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWATADAARNELIAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGPNGTTWR 457
>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
Length = 463
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/493 (42%), Positives = 293/493 (59%), Gaps = 35/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI N++T++KE F PI GKVG+YVCG T YD H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKILNTLTRRKEEFVPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII+RAN+ G + +S RY E DMA L T P+ ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKRANEEGVDASVISERYIAEVKKDMAALNVREATTHPKATEEIPDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
+M+ +I AY V G V+F K +YG+LS + +++ R+G R V+ K +P
Sbjct: 121 IEMVKTLIEKGYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSGVDEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPWG GRPGWH+ECS MS Y+ DIH GG DL+FPHHENEI
Sbjct: 181 DFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHNG + NNEKMSKSLGNFFT+R+I E+Y +R F++SAHYR
Sbjct: 241 AQSEAANGTEFARYWMHNGFLKINNEKMSKSLGNFFTVREIAEKYPLQVIRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLN+S ++++ + + I T D ++S G ++ A D ++ ++ A
Sbjct: 301 SPLNFSADLVEASKNGLERIL-TAVDRLKSIS-----GTEGEVDKAVADEMDAFVKKYEA 354
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLNT+ ++ F+ +K+ N +N+ ++ +L L N V ++ IL
Sbjct: 355 AMDDDLNTADAISVIFE-LVKYAN--VNVTEESTKATVELVL--------NTVTKLCDIL 403
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G++ K+ E+ + D+ LIEER AARK K+F+++D+IR L+ G
Sbjct: 404 GIITE---------------KKKEILDSDIEALIEERQAARKAKNFARADEIRDQLSDMG 448
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 449 IILEDTREGVKWK 461
>gi|386825986|ref|ZP_10113101.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386377168|gb|EIJ17990.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 461
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 281/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARTALERLYTALR------------GTNANAQPAGGEAFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R L
Sbjct: 394 LQQEPEQFLQSGAQADDGEVAEIE-------ALIKQRNDARKAKDWALADAARDRLNEMS 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGSQGTTWR 459
>gi|440229808|ref|YP_007343601.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
gi|440051513|gb|AGB81416.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
Length = 461
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ D AYV GDV F+++ P YG LS Q LE +AG RV +D KRNP DF
Sbjct: 122 IEITQRLLERDHAYVASNGDVMFSIDSDPQYGLLSRQDLEQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + A P AR F M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDPAAQPAGGEAFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + E LRK+ N +LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKSEDMAAANAMAAE-LRKLAN-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK+K+++ +D R L G
Sbjct: 394 LQQEPEAFLQSGAQADDGEVAEIE-------ALIKQRNDARKSKEWALADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|350570254|ref|ZP_08938622.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349797303|gb|EGZ51070.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 469
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/503 (43%), Positives = 287/503 (57%), Gaps = 50/503 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F P+ P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LTVYNTLTRQKEQFVPLNPQNVRMYVCGMTVYDYCHLGHARVMVVFDIIARWLRQCGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D A L + P +P+ ++H+ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMNEDAAALGVIRPDVEPKATEHVRQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I+N AY E GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 LAMIQRLIDNGKAYPAENGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPSEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ--------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
SC A C +S+V YW+HNG + + EKMSKSLGNFFTIR + + Y +
Sbjct: 242 SCGAHGGSCGHNHGGKTIESHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKAYDAEVV 301
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 365
R F++ AHYRSPLNYS LD A A+ +Y L++ A E+
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKNTPPAECAVSEN------------- 348
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
N F A M+DD T + F+ L + K L L+ +
Sbjct: 349 TNDYTRRFFAAMNDDFGTVEAVVVLFE------------LANEVNKTNNAELAGCLKALS 396
Query: 426 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 485
+ I+GLL + L+ L+ A L+ E++ LI +R AR K++++SD
Sbjct: 397 S-------IIGLLE----RDPLEFLQGCAAS-GSLSNEEIENLIAQRKQARAEKNWAESD 444
Query: 486 QIRADLTRKGIALMDMGKETIWR 508
+IR LT + I L D T WR
Sbjct: 445 RIRDLLTAENIILEDGANGTTWR 467
>gi|410690076|ref|YP_006963796.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
gi|389597196|gb|AFK89949.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
Length = 463
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/495 (44%), Positives = 284/495 (57%), Gaps = 40/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN+ T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIYNTYTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPA 195
++ +I AY+ E GDV F+V P YG+LS Q LE ++G+RV D KRN
Sbjct: 122 INITETLIRRGHAYIAENGDVMFSVSTDPGYGKLSRQDLEQLQSGDRVRTDVVDVKRNSM 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYR
Sbjct: 242 AQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L A A+ +Y +L+ + +++P AR A
Sbjct: 302 SQLNYSEENLKQARSALERLYTSLRGTDKSVAPAGGEAFEARFIEA-------------- 347
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F A +N LK + + LRK+ +L
Sbjct: 348 -MDDDFNTPEAYSVLFDMA-----REVNRLKSVDMAEAN-GMASHLRKLSG-------VL 393
Query: 436 GLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GLL P A+ + + D + EL LI++R ARK K++S +D R L
Sbjct: 394 GLLEQEPEAFLQSGVKTGDAEVAEIEL-------LIQQRLDARKAKNWSAADSARDRLNE 446
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 447 MGIVLEDGPQGTTWR 461
>gi|421498398|ref|ZP_15945512.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
gi|407182600|gb|EKE56543.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
Length = 458
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 289/493 (58%), Gaps = 41/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI PGKVGMYVCGVT YD H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVSFDVVARYLRYAGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + L+ R + D L L P +PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDDLTERLIGDMHQDFDALGMLRPDIEPRATQHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++ + AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF
Sbjct: 122 IALVETLLEKEHAYVADNGDVMFIVESFADYGKLSGQDLEQLQAGARVDVVEAKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + +R+FL+S HYRS
Sbjct: 242 SCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHFDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+D A + + + AR A M
Sbjct: 302 LNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARFVDA---------------M 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D ++ IN +Q+ I + ++E+ +LG
Sbjct: 346 DDDFNTPEAYSALF-DLVREIN------------RQKAEDIAVAAGLGARLRELGAVLG- 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ D LK E +E ++ QLI +R AR +K+++ +D RA LT G
Sbjct: 392 --------ILQQDPDAFLKGNEADDEVAEIEQLIAQRNQARADKNWAAADAARARLTEMG 443
Query: 496 IALMDMGKETIWR 508
I L D +T WR
Sbjct: 444 IVLEDSAGKTSWR 456
>gi|317486410|ref|ZP_07945237.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
gi|316922320|gb|EFV43579.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
Length = 485
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/493 (41%), Positives = 298/493 (60%), Gaps = 15/493 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++ YN+M+++KE FTP+ G VG+Y CG+TAY LSH+GHAR+AV+FD+L R L + EV
Sbjct: 1 MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII+RAND G + ++ Y + Y DM L + +PR ++H++++
Sbjct: 61 TFVRNFTDVDDKIIKRANDEGVSSTEIAETYIKAYHEDMDRLGVIRADIEPRATEHIQEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AY GDV+F V P YG+LSG+ ++ R+G RV K +P DF
Sbjct: 121 LNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGDEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP W+SPWG GRPGWHIECSAMS Y+ DIHGGG+DLIFPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA + WMHNG V ++EKMSKSLGNF TIR I E Y LR+FL HYRSP
Sbjct: 241 TEAALGKPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILESYLAETLRYFLAGKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FH 374
+++S+ +D + + +Y+ L++ + AL+ +E+ K A + + +L+ + F
Sbjct: 301 IDFSLDNMDESERSQKRVYECLREVDKALA--RENWKPG---AAPAELVEELKQQDQSFM 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
+ DD+NT+ + F + I + KK + + ++ + R + +L +
Sbjct: 356 DALEDDVNTAAAMGHLFN--MVRIAGRVLEDKKLRNSEGGRDILRAFRDATAKWDTLLGL 413
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P G L L++ +R L V L+ ER AR KDF++SD R +L
Sbjct: 414 FAQKPEG----FLASLREIRARRRGLDMNKVAGLLRERQEARAAKDFARSDAARDELAAL 469
Query: 495 GIALMDMGKETIW 507
G+ + D + +W
Sbjct: 470 GVEVRDTPEGPVW 482
>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|337738383|ref|YP_004637830.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
gi|384459893|ref|YP_005672313.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|21264018|sp|Q97ED6.1|SYC_CLOAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|336292051|gb|AEI33185.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
Length = 464
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 294/492 (59%), Gaps = 34/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+MT++KE F P+ P +V MYVCG T Y+ H+G+AR + FD + +Y E+ +V
Sbjct: 1 MKIYNTMTRKKEEFVPVKPNEVQMYVCGPTVYNFFHIGNARTFIVFDTVRKYFEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I +AN+ G + L +RY +EY D L T PR ++++ +I
Sbjct: 61 NFIQNFTDIDDKMIAKANNEGVSVKELGDRYIKEYYEDADGLNLERATCNPRATEYIGKI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D + + + AY ++GDV+F YG+LSGQ LE+ AG +AVD RK++PADFA
Sbjct: 121 IDFVKGLQDEGYAYEIDGDVYFNTNAFKEYGKLSGQNLEDRMAGATIAVDDRKKSPADFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+ K GEPSW+SPWG GRPGWHIECS M+ L DIH G IDLIFPHHENEIAQS
Sbjct: 181 LWKSEKPGEPSWESPWGKGRPGWHIECSCMARDLLGDTIDIHAGAIDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMH ++ NNEKMSKSL NF T R I + Y +R FL+SAHYR+PL
Sbjct: 241 EARTGKPFSKYWMHAAYLNINNEKMSKSLNNFLTARDILKEYDAEVIRLFLLSAHYRTPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHAR 376
N++ +++A ++ +Y T+ + L+ TA N +E ++ R++F +
Sbjct: 301 NFTEESIEAAKTSLERLYNTINNLGSLLN------NTAESNDDSEYLKALDSYREKFIEK 354
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ ++ F D K IN ++N K ++ +SL+ L K
Sbjct: 355 MDDDFNTADGISVIF-DLAKDINININGKSSKAAVEKAISLMRELGK------------- 400
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
P G +LQ+++ L E+++ LIE+R ARKNKD++ +D+IR DL +GI
Sbjct: 401 --PLG----ILQKVEKHNL------EDEIQNLIEQRQNARKNKDWALADKIRDDLKERGI 448
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 449 VLEDTPEGIRWK 460
>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 461
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 282/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNESCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I D AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IALTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSALFD-----IAREVNRLKTED--------ITAANGLAAELRKLAHVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQSGAQTNDDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDGPQGTIWR 459
>gi|405373480|ref|ZP_11028253.1| Cysteinyl-tRNA synthetase [Chondromyces apiculatus DSM 436]
gi|397087739|gb|EJJ18769.1| Cysteinyl-tRNA synthetase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 489
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/498 (43%), Positives = 302/498 (60%), Gaps = 26/498 (5%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++++N+MT QKEL P VPG+VG+YVCG T Y H+G+AR SFD++ RYL H +
Sbjct: 5 AIRLFNTMTMQKELLQPAVPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRGLK 64
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRNFTDVDDKII+ A + GE P++L+ R+ + + D L L P PRVSDH+ +
Sbjct: 65 VRYVRNFTDVDDKIIKAAAETGEAPVALAARFVELFREDAKALHLLEPDVAPRVSDHLPE 124
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I ++++ AY +GDV+F+V +Y +LS + L++ G+RV +KR P DF
Sbjct: 125 IIAIIQKLVDKGHAYASQGDVYFSVSSDADYAKLSKRNLDDLCVGDRVQPGEQKREPLDF 184
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP+WDSPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQ
Sbjct: 185 ALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQ 244
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A + YWMH G + KMSKSLGN +R + P ALR F +S HYR P
Sbjct: 245 SESANGVTFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLSTHYRHP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDE 372
L +S L A + Y Y+TL+ D VA F + HG+ R E
Sbjct: 305 LAFSDKALADAEARMEYFYETLRKVDERVAGKDFGKGPLHGEPHR-----------FFGE 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F + M DD N++ L +L + +N L K P + + + +L+ + +V+ V
Sbjct: 354 FESAMDDDFNSAGGLG-----SLSGLFGMMNELADKPPVKDKALMGRTLQALREDVRRVS 408
Query: 433 RILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+LGL P A+ L + +++A++ + DV +L+ ER AAR KDF+ +D++R++
Sbjct: 409 GVLGLFEDAPDAW---LLRRRERAVRERGIDVADVERLLGERTAARAAKDFAAADRVRSE 465
Query: 491 LTRKGIALMDMGKETIWR 508
L +KG+ +MD T W+
Sbjct: 466 LKQKGVEIMDTPAGTTWK 483
>gi|423507884|ref|ZP_17484451.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449086756|ref|YP_007419197.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|402442671|gb|EJV74592.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449020513|gb|AGE75676.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 465
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 299/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE I K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--IEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL ++++ +LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELSKEELLDKEIEELIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|440785439|ref|ZP_20962196.1| cysteinyl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218335|gb|ELP57557.1| cysteinyl-tRNA ligase [Clostridium pasteurianum DSM 525]
Length = 465
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/495 (39%), Positives = 299/495 (60%), Gaps = 33/495 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+M+++KE F PI PG+V MYVCG T Y+ H+G+AR + FD + RY E+ +V
Sbjct: 1 MKIFNTMSKEKEEFVPINPGEVKMYVCGPTVYNFFHIGNARTFIIFDTVRRYFEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++++NFTD+DD++I +AN G + L +++ EY D L T PR ++ + I
Sbjct: 61 SFIQNFTDIDDRMINKANQDGISIKELGDKFISEYYKDADGLHIERATANPRATEFIYDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GD++F+ EK +YG+LSGQ LE +G R+ VD RK+NP DFA
Sbjct: 121 ISFVKDLVDKGYAYEVDGDIYFSTEKFKDYGKLSGQDLEQLESGVRINVDERKKNPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEP+W+SPWGPGRPGWHIECS M+ L DIH GG+DL+FPHHENEIAQS
Sbjct: 181 IWKKQKDGEPAWESPWGPGRPGWHIECSCMAHKLLGDTIDIHAGGMDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ +YWMH+ ++ NN+KMSKSL NF T R E++ +R ++SAHYR+ L
Sbjct: 241 ESRNGKKFANYWMHSAYLNVNNQKMSKSLNNFLTARDALEKFDYEVIRFLMLSAHYRTQL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
NYS L+S+ A+ +Y ++ + E L E +++ ++ ++ L RD++
Sbjct: 301 NYSPELLESSKSALDRVYNSIYNLESLL----EKSTVSKLKDDEKEYLDNLKSYRDKYIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M DD NT+ ++ F D ++ +NS+L++ K+ + +SLI L K
Sbjct: 357 KMDDDFNTADAISVIF-DIVRDVNSNLDINSSKEIVEASISLIRELGK------------ 403
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
P G +LQ+ L+R ++ +LIEER ARK K+F+ +D+IR DL KG
Sbjct: 404 ---PLG----ILQKSTKVDLER------EIEKLIEERQKARKEKNFALADKIRDDLKDKG 450
Query: 496 IALMDMGKETIWRPC 510
I L+D + W+
Sbjct: 451 IILLDTPQGVRWKKA 465
>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 474
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/494 (42%), Positives = 296/494 (59%), Gaps = 25/494 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T++KE F P+ GKV Y CG T YD H+G+AR + FD+L RYLE
Sbjct: 1 MALALYNDLTRKKEPFVPLHEGKVAFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEFRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVT+V+NFTD+DDK+I RAN G L+ + +Y D L ++ PR ++++
Sbjct: 61 EVTFVQNFTDIDDKMIARANRDGVTVQQLAEKTIADYYEDADALGIKRASFYPRATEYIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I MI +II+N AYV +G VFF V+ P YG+LS Q L++ ++G R+ VD KR+P D
Sbjct: 121 KIIAMIQRIIDNGHAYVADGTVFFDVKSFPAYGKLSHQNLDDLQSGARIEVDDVKRSPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK K GEP+W+SPWG GRPGWHIECSAMS L DIH GGIDL+FPHHENEIA
Sbjct: 181 FVLWKPQKPGEPAWESPWGLGRPGWHIECSAMSTDLLGDTVDIHTGGIDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA V YW+HN ++ N EKMSKSLGNF T R +++ PLA+R F++ AHYRS
Sbjct: 241 QTEAATGKPFVKYWLHNEYILINAEKMSKSLGNFLTARAARQKFPPLAIRMFMLGAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
P+N++ L+ A+ AV + L++C ++ + G+T+ A ++ R +F
Sbjct: 301 PINFTPEGLEQAAAAV----ERLRNCWSDLQFAKGGRLGETSAAGAALMAALDTFRADFT 356
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + G +A+ +N L +K P + + + K ++ V+ I
Sbjct: 357 AAMDDDFNTAAAI-GVIFEAVTEVNKYLKGNEKLDP-----AAVAAAEKFFGDIDSVMGI 410
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+G + Q+ K+++ A E LI ER AARK +DF +SD IR +L +
Sbjct: 411 IG---------IEQEKKEESGDEAARIE----PLIAERNAARKARDFKRSDAIRDELAAQ 457
Query: 495 GIALMDMGKETIWR 508
GI L D + T W+
Sbjct: 458 GIILEDTPQGTKWK 471
>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 465
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/490 (41%), Positives = 292/490 (59%), Gaps = 28/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+ + KE F PI PGK +YVCGVT YD H+GHAR+AV+FD + RYL + EV
Sbjct: 2 IRLYNTQSSSKEDFIPIEPGKARIYVCGVTTYDHCHIGHARSAVAFDSIRRYLSYRGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+N+TD+DDKII RA + GE +L+ R+ E+ DMA L LPPT PR ++H+ ++
Sbjct: 62 TFVKNYTDIDDKIINRARENGEEWKALAERFISEHDRDMAALYVLPPTIAPRATEHLPEM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++++N AY D+FF V + YG+LS + LE+ ++G RV V+ K NP DF
Sbjct: 122 IALIEKLLDNGYAYKGGDDIFFRVHRFTEYGKLSHKALEDLQSGSRVEVNPLKENPLDFV 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEPSW++ +G GRPGWHIECSAM +L FDIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKGKKEGEPSWEASFGAGRPGWHIECSAMGHKHLGRVFDIHGGGKDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+HNG V NNEKMSKSLGNFFTI++I + Y P LR FL HYRSP+
Sbjct: 242 QAGYGCAPARYWIHNGFVNINNEKMSKSLGNFFTIKEILQHYDPEVLRLFLAQTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++ + A A+ +Y+ L++ F+ H T R + + ++ + +F M
Sbjct: 302 DFCEENMTMARQALEKLYRFLEN-------FENHEDT-RTSDSIAPVLSDITRKFEEAMD 353
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD N++ L F+ ++ L K P + + + +VL I L
Sbjct: 354 DDFNSALALASLFE--------GVHTLNKLNPSSAD---AKGIYDTYCRLGDVLGIFQSL 402
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P ++ ++L+ +++ IE R AAR++KDF+ +D+IR +L G+ +
Sbjct: 403 PSQWFARQ---------STSQLSADEIAARIEARNAARRDKDFATADRIRDELLENGVEI 453
Query: 499 MDMGKETIWR 508
D + T WR
Sbjct: 454 KDSKEGTSWR 463
>gi|300857267|ref|YP_003782251.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437382|gb|ADK17149.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 465
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/495 (41%), Positives = 299/495 (60%), Gaps = 37/495 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+MT++KE F P+ +V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKIFNTMTREKEEFVPLDSDEVKMYVCGPTVYNFFHIGNARTFVVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++A D L +++ +EY D L T PR + ++ +I
Sbjct: 61 RFVQNFTDIDDKMIKKAQDEHITVKELGDKFIKEYYKDADALHIKRATVNPRATLYITKI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ D AY ++GDV+F+ +K NYG+LSGQ +++ RAG R+ VD RK++P DFA
Sbjct: 121 IEFIGDLIDRDYAYEIDGDVYFSTKKFSNYGKLSGQNIDDLRAGARIDVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 181 VWKGQKPGEPAWESPWGMGRPGWHIECSCMAHDLLGETIDIHAGGSDLMFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ YWMH+ V NN+KMSKSL NFFT+R+I E+Y P +R F++S HYR+ +
Sbjct: 241 EGRTGKTFARYWMHSAFVNVNNQKMSKSLNNFFTVREILEKYEPDVIRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALS-----PFQEHGKTARINPAAEDCINKLRDEF 373
N+S+ LDS A+ +Y ++ + E L P E+ K R + + K + +
Sbjct: 301 NFSMELLDSTKSALDRLYNSITNLENLLDNKEDIPISENEKEYR------NKLGKYKQRY 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+M DD NT+ ++ F D +K IN S+N + S +E +R N ++E+
Sbjct: 355 IEKMDDDFNTADAISVIF-DLVKDINVSIN----------KDSSVEVIRDSLNLIREL-- 401
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GA +LQQ K ++ E+++ LIE+R AR K+++ SD+IR DL
Sbjct: 402 -------GAPLGILQQSKRGSI------EKEIEALIEKRQIARSEKNWALSDKIRDDLKA 448
Query: 494 KGIALMDMGKETIWR 508
+GI L D + W+
Sbjct: 449 QGIVLEDTPEGVRWK 463
>gi|188590724|ref|YP_001919652.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|251778988|ref|ZP_04821908.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|229558624|sp|B2UY90.1|SYC_CLOBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188501005|gb|ACD54141.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|243083303|gb|EES49193.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 470
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/499 (40%), Positives = 295/499 (59%), Gaps = 41/499 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++I+N++T++KE F PI PG+V MYVCG T Y+ H+G+ R + FD + RYLE+ +V
Sbjct: 1 MRIFNTLTRKKEEFIPITPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + ++Y +EY D LQ T PR ++++E I
Sbjct: 61 KFVQNFTDIDDKMIKKANEEGTTVKEIGDKYIKEYYEDADKLQIERATVNPRATEYIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAG----ERVAVDSRKRNP 194
D + Q+I AY VEGDV+F +K +YG+LSGQ +E+ + G D RK++P
Sbjct: 121 IDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSVADERKKDP 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DFA+WK+ K GEP+W PWG GRPGWHIECS M+ L DIH GG+DL FPHHENE
Sbjct: 181 MDFAIWKSQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDLTFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
+AQS A +YWMH+ +V NN+KMSKSL NFFT R I + Y +R F++SAHY
Sbjct: 241 VAQSEALTGVQFANYWMHSAYVNINNQKMSKSLNNFFTARDILKEYDSDVVRFFMMSAHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKL 369
R +N+S LDSA +V +Y + + E + + +R N E+ +NK
Sbjct: 301 RLQINFSKDLLDSAKASVERLYNAIGNLENLID------EVSRENMNEEEVRYLNSLNKY 354
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
R+++ +M DD NT+ LT F+ K N+++N+ K+ + L LI L
Sbjct: 355 REKYIEKMDDDFNTADALTVLFE-LTKDTNTNINVNSSKELVNKALDLIREL-------- 405
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
GA +LQ++ +L E+++ LI++R ARKNKDF+ SD+IR
Sbjct: 406 -----------GAPLGLLQKITKGSL------EDEIESLIQQRQDARKNKDFALSDKIRD 448
Query: 490 DLTRKGIALMDMGKETIWR 508
DL +GI L D + W+
Sbjct: 449 DLKDRGIVLEDTPQGVRWK 467
>gi|409992104|ref|ZP_11275315.1| cysteinyl-tRNA ligase [Arthrospira platensis str. Paraca]
gi|409937048|gb|EKN78501.1| cysteinyl-tRNA ligase [Arthrospira platensis str. Paraca]
Length = 486
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/501 (42%), Positives = 298/501 (59%), Gaps = 25/501 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKIYN+ T+QKE FT + PGKV MY CGVT YD HLGHAR+ ++D++ RYLE
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA + +S R+ Y D+ L PRV+DH++
Sbjct: 61 EVNYVQNFTDIDDKILNRAKEHDSTMEEVSQRFIDAYFEDLRRLNVRDANAYPRVTDHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----R 190
+I +I + AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +
Sbjct: 121 EIHQLIDTLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPH
Sbjct: 181 KKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFL 309
HENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F+
Sbjct: 241 HENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFI 300
Query: 310 ISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINK 368
+ HYR PL+++ + SA++ ++TL+D + + G + +P D
Sbjct: 301 LQGHYRKPLDFTDEAIASANNG----WETLKDGLLFAQQYGAPLGWSDDSSPGKYDTTED 356
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
F M DD NT L F+ A K + N+L + Q I ++ K +
Sbjct: 357 ALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTQSDRIYAIWKT---L 412
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
E+ + GL E + Q + A + +++ ++ L+++R +ARK K++++ D+IR
Sbjct: 413 VELAGVFGL-------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKNYAEGDRIR 464
Query: 489 ADLTRKGIALMDM-GKETIWR 508
L G+ L+D G ET+WR
Sbjct: 465 DQLQASGVTLIDRPGGETLWR 485
>gi|340363807|ref|ZP_08686122.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
gi|339884918|gb|EGQ74673.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
Length = 473
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 287/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREYGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K + L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDVHLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + + L+ A+ L+ E++ LI +R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIAQRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 482
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/499 (41%), Positives = 301/499 (60%), Gaps = 33/499 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H++ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIDDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 IAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------- 369
PL++S +L+ A+ ++L+ A+ + P + D +L
Sbjct: 303 PLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGSCDEAQRLLEKAKAY 352
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
+EF MSDD NT+ + F + +N+ + ++ + E++ +++ K
Sbjct: 353 EEEFEDAMSDDFNTALATSSMFG-----LAKEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+ ++G+L + + A EE + ++ R A R+ K ++ +D IR
Sbjct: 408 FMTDVIGVLE--------KAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRD 459
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI + D + W+
Sbjct: 460 RLAEIGITIEDSPQGARWK 478
>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 482
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/498 (42%), Positives = 299/498 (60%), Gaps = 31/498 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + IY+SM+ QK FTP+ GKVGMYVCG+T YD H+GHAR V FD++ R+L H+
Sbjct: 8 MPITIYDSMSGQKRPFTPLEAGKVGMYVCGMTVYDYCHIGHARVMVGFDVVVRWLRHIGY 67
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRN TD+DDKII RA D GE+ L++R+ + D +L C P +P+ +D +
Sbjct: 68 DVNYVRNITDIDDKIINRAKDNGESIYELTDRFIKAMHEDADNLGCERPNSEPKATDFIP 127
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRN 193
Q++ +I + + + AY GDV++AVE YG+LS +RL + +AG ERV V++ K+N
Sbjct: 128 QMQHLIQTLESKNLAYQGATGDVYYAVENFAEYGKLSKRRLADMQAGASERVNVETDKKN 187
Query: 194 PADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
P DF LWK+AK EPS W SPWG GRPGWHIECSAMS L FDIHGGG DL FPH
Sbjct: 188 PFDFVLWKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFDIHGGGHDLQFPH 247
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
HENEIAQS A + + WMH G + + EKMSKSLGNFFTIR + ++HP +R F++
Sbjct: 248 HENEIAQSEGATGKTYANNWMHVGFINVDGEKMSKSLGNFFTIRDVMGQFHPETIRFFIL 307
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
S+HYRSP+N+S L A ++ +YQ L+ E P E +T P
Sbjct: 308 SSHYRSPVNFSDSALKEAQTSLTRLYQALKSVESLTEPAGEIDETPFETP---------- 357
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
F+ M DD N++ ++ F A + IN ++N+ + + +L + ++ +
Sbjct: 358 --FNQAMCDDFNSAGAVSVLFSLARE-INKAVNL-----ETVEGNAQALALATLLKDLAQ 409
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
L IL L P ++ LQ K + L++ ++ IE R A+ +KDF+K+DQIR+D
Sbjct: 410 PLNILQLNP----TDFLQA---KVGETTGLSDSEIEAFIEARKQAKADKDFAKADQIRSD 462
Query: 491 LTRKGIALMDMGKETIWR 508
L +GI L D T WR
Sbjct: 463 LKAQGIELEDGKNGTTWR 480
>gi|345888163|ref|ZP_08839277.1| cysteinyl-tRNA synthetase [Bilophila sp. 4_1_30]
gi|345041019|gb|EGW45221.1| cysteinyl-tRNA synthetase [Bilophila sp. 4_1_30]
Length = 485
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 297/490 (60%), Gaps = 9/490 (1%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++ YN+M+++KE FTP+ G VG+Y CG+TAY LSH+GHAR+AV+FD+L R L + EV
Sbjct: 1 MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII+RAND G + ++ Y + Y DM L + +P+ ++H++++
Sbjct: 61 TFVRNFTDVDDKIIKRANDEGVSSTEIAETYIKAYHEDMDRLNVIRADIEPKATEHIQEM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AY GDV+F V P YG+LSG+ ++ R+G RV K +P DF
Sbjct: 121 LNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGDEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK GEP W+SPWG GRPGWHIECSAMS Y+ DIHGGG+DLIFPHHENEIAQ
Sbjct: 181 ALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA + WMHNG V ++EKMSKSLGNF TIR I E Y LR+FL HYRSP
Sbjct: 241 TEAALGKPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILESYLAETLRYFLAGKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+++S+ +D + + +Y+ L++ + AL+ +E+ K + + + F +
Sbjct: 301 IDFSLDNMDESERSQKRVYECLREVDKALA--RENWKPGAAPAELMEELKQQDQSFMDAL 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD+NT+ + F + I + KK + + ++++ R + +L +
Sbjct: 359 EDDVNTAAAMGHLFN--MVRIAGRVLEDKKLRNSEGGRDILKAFRDATAKWDTLLGLFAQ 416
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P + L L++ +R L V++L+ ER AR KDF++SD R +L G+
Sbjct: 417 KP----EDFLASLREIRARRRGLDMNKVVELLRERQEARAAKDFARSDAARDELAALGVE 472
Query: 498 LMDMGKETIW 507
+ D + +W
Sbjct: 473 VRDTPEGPVW 482
>gi|187932481|ref|YP_001884454.1| cysteinyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
gi|229558625|sp|B2TIF6.1|SYC_CLOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187720634|gb|ACD21855.1| cysteine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
Length = 470
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/499 (41%), Positives = 297/499 (59%), Gaps = 41/499 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++I+N++T++KE F PI PG+V MYVCG T Y+ H+G+ R + FD + RYLE+ EV
Sbjct: 1 MRIFNTLTRKKEEFIPITPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + ++Y +EY D LQ T PR ++++E I
Sbjct: 61 KFVQNFTDIDDKMIKKANEEGTTVKEIGDKYIKEYYEDADKLQIERATVNPRATEYIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVA--VDSRKRNP 194
D + Q+I AY VEGDV+F +K +YG+LSGQ +E+ + G R + D RK +P
Sbjct: 121 IDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSIADERKNDP 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DFA+WKA K GEP+W PWG GRPGWHIECS M+ L DIH GG+DL FPHHENE
Sbjct: 181 MDFAIWKAQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDLTFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
+AQS A +YWMH+ +V NN+KMSKSL NFFT R I + Y +R F++SAHY
Sbjct: 241 VAQSEALTGMRFANYWMHSAYVNINNQKMSKSLNNFFTARDILKEYDSDVVRFFMMSAHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKL 369
R +N+S LDSA +V +Y + + E + + +R N + E+ + K
Sbjct: 301 RLQINFSKDLLDSAKASVERLYNAIGNLENLID------EVSRENISEEEVNYLNSLKKY 354
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
R+++ +M DD NT+ LT F+ K N+++N+ K+ + L+LI L
Sbjct: 355 REKYIEKMDDDFNTADALTVLFE-LTKDTNTNINVNSSKELVNKALNLIREL-------- 405
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
GA +LQ++ +L E+++ LI++R ARKNKDF+ SD+IR
Sbjct: 406 -----------GAPLGLLQKITKGSL------EDEIESLIQQRQDARKNKDFALSDKIRD 448
Query: 490 DLTRKGIALMDMGKETIWR 508
DL +GI L D + W+
Sbjct: 449 DLKDRGIVLEDTPQGVRWK 467
>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|187629841|sp|A4SX62.1|SYC_POLSQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/504 (43%), Positives = 293/504 (58%), Gaps = 48/504 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++ K++F PIVPGKV MYVCG+T YD H+GHAR + FD++ R+L EV
Sbjct: 2 LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E +L+NR+ D +L + P +PR +D+++Q+
Sbjct: 62 QYVRNITDIDDKIIKRALENSEPISALTNRFIAAMHADSDELGLMHPDQEPRATDYIQQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ MI ++I N+ AY E GDV FAV P YG+LSG+ L+ AGERVA+ KR+P DF
Sbjct: 122 QGMIGKLIENELAYQGEDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIGGGKRDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AK EP+ W+SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENE
Sbjct: 182 VLWKSAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSN--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 306
IAQS A N V+YWMHNGH+ N EKMSKSLGNFF IR + + + P +R
Sbjct: 242 IAQSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVVR 301
Query: 307 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDC 365
F++ AHYRSP+NYS QL+ A + +Y L EV P D
Sbjct: 302 FFMLKAHYRSPINYSDAQLEEARSGLTRLYTALTHIPEVDTVPI--------------DL 347
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
N F M+DD NT + F + S +N + + KQ L++SL
Sbjct: 348 QNPWAKRFADAMNDDFNTPEAIAVLFD-----LASEVNRAQGAE-KQMLAGLLKSLGGTL 401
Query: 426 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 485
N ++ P + L+ + ++ L+ E + + I R AA++ KDF+K+D
Sbjct: 402 NFLQR--------DPTNF------LQAGSKDQSGLSSEQIEEHIAARVAAKQAKDFAKAD 447
Query: 486 QIRADLTRKGIALMDM-GKETIWR 508
IR L +G+ L D G T WR
Sbjct: 448 GIRKALLEQGVVLEDKPGGITEWR 471
>gi|427414123|ref|ZP_18904313.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
gi|425714499|gb|EKU77502.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
Length = 484
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/495 (44%), Positives = 303/495 (61%), Gaps = 23/495 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+MT++KE+F P+ G+ +YVCGVT Y+ H+G+AR V++D++ RYL H+ +V
Sbjct: 4 IKVYNTMTREKEVFKPVKEGEAKIYVCGVTPYNHPHIGNARPFVTWDVIRRYLTHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS+H+++I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALHVRHADVYPRVSEHIDEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY ++GDV+++VEK +YG+LSG+ L++ AG RV VD RK+NP DFA
Sbjct: 124 IAMISTLIEKGFAYELDGDVYYSVEKFEDYGKLSGRTLDDMEAGARVDVDDRKQNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP W+SPWG GRPGWHIECS MS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKSAKPGEPYWESPWGNGRPGWHIECSTMSNKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C S V YW+HNG +T N EKMSKSL NFF ++ I + Y P ALR+FL+S HYRS
Sbjct: 244 EGCTGHHPS-VRYWLHNGFITINQEKMSKSLNNFFLVKDILKEYSPDALRYFLMSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +L+ A+ ++ + +Q+ + QE G+ A D K +EF
Sbjct: 303 PLDFSDERLEEANKSLERMTTAIQN--LLYLENQEEGECDEEAKALLDNARKYAEEFEEA 360
Query: 377 MSDDLNTSHILTGAFQDAL-KFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
MSDD NT+ L GA L K IN ++ K E+L ++ N K + I+
Sbjct: 361 MSDDFNTA--LAGAPMFGLAKEINIYYQAVQNCNGKVCH----ETLAEVRNIFKMMTDII 414
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTE-EDVLQLI-EERAAARKNKDFSKSDQIRADLTR 493
G +L+Q + A E E ++Q+I R AR+ K + +D IR +L
Sbjct: 415 G---------ILEQAWEGPQSGAGAEEYEKLMQVILNVRQNAREQKLWDLADAIRDELGN 465
Query: 494 KGIALMDMGKETIWR 508
GI + D + W+
Sbjct: 466 IGIVIEDSPQGARWK 480
>gi|349611156|ref|ZP_08890463.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
gi|348614537|gb|EGY64083.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
Length = 473
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/507 (42%), Positives = 287/507 (56%), Gaps = 54/507 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LTIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 242 SVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------- 353
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
N F+A M+DD T + F+ L + K + L L
Sbjct: 354 -----NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDVHLAGCL 396
Query: 422 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ + I+GLL + + L+ A+ L+ E++ LI R AR +K++
Sbjct: 397 KALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNW 444
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR L I L D T WR
Sbjct: 445 AESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|422017177|ref|ZP_16363745.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|414105882|gb|EKT67436.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 462
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 290/491 (59%), Gaps = 33/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ + + +P A I K R F M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDKSATP-------------AGGEIYKSR--FCEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A LN LK + +++ + +++E+ ++LGL
Sbjct: 347 NDDFNTPEAYSALFDMA-----RELNRLKTEN--------MDAANGMAAQLRELAKVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E Q ++ AE+ + + LI++R AR++KD++ +DQ R LT GI
Sbjct: 394 LEQD--PETFLQGGAQSEDDAEVAK--IEALIKQRNDARQSKDWALADQARDALTAMGIV 449
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 450 LEDSSAGTTWR 460
>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 488
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/496 (41%), Positives = 292/496 (58%), Gaps = 22/496 (4%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++ ++N++T QKE PG V +YVCG T Y H+G+AR SFD++ RYL +
Sbjct: 5 SIALFNTLTMQKEPLVTAEPGVVRLYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGYR 64
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRN+TDVDDKII+ A++ GE P++L+ R+ + + D L + P P+VS+H+ +
Sbjct: 65 VHYVRNYTDVDDKIIKAAHETGEEPVALAGRFVKIFQDDTRALHLVEPDVAPKVSEHLPE 124
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I +I ++ AY +GDV+F+V P Y +LS ++L++ AGERV +KR P DF
Sbjct: 125 ILRIIETLVAKGVAYESQGDVYFSVSSYPEYAKLSKRKLDDLCAGERVQPGEQKREPLDF 184
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEPSWDSPWG GRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQ
Sbjct: 185 ALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSAKYLGESFDIHGGALDLIFPHHENEIAQ 244
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA YWMH G + KMSKSLGN +R R ALR F +S HYR P
Sbjct: 245 SEAASGKPFAKYWMHCGFLDIEGAKMSKSLGNVVRLRDALTRVDAEALRFFFLSTHYRHP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDE 372
L++S + + + Y Y+TL+ D V F + HG+ R E
Sbjct: 305 LHFSDKAIADSEYRLEYFYETLRKVDERVGGKDFGQGPLHGEPGR-----------FLQE 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F A M DD N L AL + +N L K P + + + +L+ + + V++V
Sbjct: 354 FEAAMDDDFNCPGAL-----GALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRKVS 408
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGL +L++ +D+A+K + V +L+ ER ARK+K+F+++D++R++L
Sbjct: 409 SVLGLFEDDPTQWLLRR-RDRAVKERGIDVAQVERLLSERNEARKSKNFAEADRLRSELK 467
Query: 493 RKGIALMDMGKETIWR 508
+G+ +MD T W+
Sbjct: 468 GQGVEIMDTVAGTSWK 483
>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
Length = 482
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/499 (41%), Positives = 301/499 (60%), Gaps = 33/499 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+F P+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G + +++NRY Y M L PRVS H++ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDVLGVQRADIYPRVSTHIDDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 IAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKHGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------- 369
PL++S +L+ A+ ++L+ A+ + P + D +L
Sbjct: 303 PLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGSCDEAQRLLEKAKAY 352
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
+EF MSDD NT+ + F A +N+ + ++ + E++ +++ K
Sbjct: 353 EEEFEDAMSDDFNTALATSSMFGLA-----KEINIYYQAVTSREGVVCQEAIAEVKRIFK 407
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+ ++G+L + + A EE + ++ R A R+ K ++ +D IR
Sbjct: 408 FMTDVIGVLE--------KAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRD 459
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI + D + W+
Sbjct: 460 RLAEIGITIEDSPQGARWK 478
>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
gi|187629787|sp|A8MLB7.1|SYC_ALKOO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
Length = 464
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/493 (42%), Positives = 299/493 (60%), Gaps = 34/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE F P+ GKV MY CG T Y+ H+G+AR + FD L RYL + +V
Sbjct: 1 MKLYNTLTRKKEEFIPLEEGKVRMYACGPTVYNYFHIGNARTFMVFDALRRYLIYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTDVDDKIIRRAN+ G P +S R+ +EY D L P+V+++M +I
Sbjct: 61 TFVQNFTDVDDKIIRRANEEGVAPEEISERFIKEYFYDAGTLGIEKADIHPKVTENMAEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY GDV+F V K YG+LS Q LE+ +AG R+ ++ K+NP DFA
Sbjct: 121 IAFVAKLVEKGHAYESNGDVYFDVSKYEEYGKLSKQSLEDLQAGARIEINEYKKNPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AKAGEPSW+SPWG GRPGWHIECSAM+ YL DIHGGG DL+FPHHENEIAQS
Sbjct: 181 LWKSAKAGEPSWESPWGNGRPGWHIECSAMAKRYLGETIDIHGGGGDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +YW+H G++ +N+KMSKSL NFFT R+I+E + LR F++SAHYR+P+
Sbjct: 241 EACSGKKFANYWLHVGYLNVDNKKMSKSLNNFFTPREISEEFDLENLRFFMLSAHYRNPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L++A + + +Y + E L E+ ++ ++ I+ L +++F
Sbjct: 301 NFSRDLLEAAKNGLDRLYTGKNNLEYLL----ENAAEREVSEEEKNFIHGLQSFKNQFID 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+ DD NT+ + F D ++ INS ++ K+ + L+ E+ +L
Sbjct: 357 AVDDDFNTADGIAVIF-DLVREINSHISEKNSKKAVEASYDLL----------MELTGVL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL + AE EE++ +LI ER ARK+K+F+ SD+IR DL KG
Sbjct: 406 GLLK----------------REAEDLEEEIERLIAERQQARKDKNFALSDKIRDDLKEKG 449
Query: 496 IALMDMGKETIWR 508
I L D + WR
Sbjct: 450 IVLEDTAQGVKWR 462
>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|385779993|ref|YP_005689158.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|419721338|ref|ZP_14248502.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
gi|419726884|ref|ZP_14253904.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|187629806|sp|A3DH43.1|SYC_CLOTH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|380769849|gb|EIC03749.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|380782508|gb|EIC12142.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
Length = 468
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/492 (41%), Positives = 294/492 (59%), Gaps = 31/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T++KE F PI +V MY CG T Y+ H+G+AR + FD L RYLE+ V
Sbjct: 1 MRLYNTLTRKKEEFHPIDEKEVKMYSCGPTVYNYFHIGNARPFIIFDTLRRYLEYKGYNV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I+RAN+ G L++++ EY VD L T PR +++++ I
Sbjct: 61 KFVQNFTDIDDKMIKRANEEGITVKELADKFINEYFVDAKGLGIKEATVHPRATENIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI ++ AY V+GDV+F+ K YG+LS Q LE+ G R+ VD RK++P DFA
Sbjct: 121 IEMIKKLEEKGFAYNVDGDVYFSARKFTEYGKLSHQSLEDLELGARIDVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +W+HNG + + EKM+KS GNFFT+R I + + +R F++SAHYRSP+
Sbjct: 241 EAANGKPFARFWLHNGFINVDGEKMAKSKGNFFTVRDIAKTFDYEVIRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L+ A + + IY L + E +EH + +I + + N+L + +F
Sbjct: 301 NFSAELLEQAKNGLERIYNCLDNLEY----LKEHAQAEKITDSERELQNRLLGIKAKFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD+NT+ + F D +K +N+++N + SL SL +KE+ +L
Sbjct: 357 AMDDDINTADAIAAIF-DIVKEVNTNINATSNSSKEIIDFSL--SL------IKELGGVL 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G + Q+ + K L ++++ +LIE R ARK KD+ +D+IR L G
Sbjct: 408 G---------IAQKSRQKVL------DKEIEELIERRQKARKEKDWKTADEIRDKLKEMG 452
Query: 496 IALMDMGKETIW 507
I L D + W
Sbjct: 453 IILEDTPQGVKW 464
>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 482
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/500 (43%), Positives = 298/500 (59%), Gaps = 35/500 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+FTP+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G ++NRY Y M L PRVS H+ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 LKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P + R+ A++
Sbjct: 303 PLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIESLRKIENEV 428
+EF A MSDD NT+ + F A K IN ++ ++ Q ++ ++ + K EV
Sbjct: 354 EEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEV 412
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
VL GA + +QL D L R A R+ K ++ +D IR
Sbjct: 413 IGVLEKAWEGNTGADAAEYEQLMDVILSV--------------RQACREQKQWALADCIR 458
Query: 489 ADLTRKGIALMDMGKETIWR 508
L GI + D W+
Sbjct: 459 DRLAEIGITIEDSPTGARWK 478
>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 469
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/499 (42%), Positives = 298/499 (59%), Gaps = 34/499 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L +YN +T++KE F P+ G+VG Y CG T YD H+G+AR + FD+L RY+E
Sbjct: 1 MSLVLYNDLTRKKEPFVPLKDGEVGFYSCGPTVYDYFHIGNARPFIVFDVLRRYMEFSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VT+V+NFTDVDDK+I RAN++G L+ + +Y D L T+ PR ++H+E
Sbjct: 61 RVTFVQNFTDVDDKMINRANEMGITVQELAEKTIADYFEDADALGIKRATHYPRATEHIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I D++ ++ + AY V+G V+F V P YG+LS Q +E ++G R+ V+S KRNP D
Sbjct: 121 EIIDLVKRLEESGHAYEVDGVVYFDVSSFPEYGKLSRQNIEELQSGSRIEVNSSKRNPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GEP+WDSPWG GRPGWHIECSAM+ YL + DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAQKPGEPAWDSPWGKGRPGWHIECSAMAMKYLGNTLDIHSGGTDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA ++ V YW+HN ++ + EKMSKSLGNF T R+ + Y PLA+R F++SAHYRS
Sbjct: 241 QAEAATEEVFVRYWLHNEYILIDKEKMSKSLGNFMTAREARKHYSPLAIRMFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED----CINKLRDE 372
P+N+ L A+ A+ + L +C S F+ + R + +D I + RD+
Sbjct: 301 PVNFGPEGLQQATAAL----ERLHNC---WSDFR-YAADNRPHSQGQDDIVESIKRHRDD 352
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F A M DD NT+ + F+ A+ +N L K E ++ IE+ ++V
Sbjct: 353 FVAAMDDDFNTAGAIGHIFE-AVSTVNGHL--------KGNDSLSSEGIKAIEDFFRDVD 403
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
I+GL+ G S+ Q D E++ LI +R AR KDF+ SD IR L
Sbjct: 404 SIMGLI--GLDSD--GQDDDS---------EEIESLIRKREEARSAKDFATSDAIRDQLA 450
Query: 493 RKGIALMDMGKETIWRPCV 511
KG+ L D + T W+ +
Sbjct: 451 AKGVILEDTPQGTKWKKKI 469
>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
Length = 454
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/491 (44%), Positives = 279/491 (56%), Gaps = 41/491 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IY+S + K F PI P VGMYVCG+T YD H+GHAR V FD++ RY EV
Sbjct: 2 LVIYDSHARAKREFVPIKPKTVGMYVCGMTVYDRCHIGHARVMVVFDMVVRYFRASGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RA + E+ SL+ RY + D A L CL PT +PR ++ + +
Sbjct: 62 HYVRNITDIDDKIIARAAENKESIRSLTERYIEAMHDDAAALGCLLPTAEPRATESVGDM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY GDV+F V YG LS + ++ RAG RV +D K +P DF
Sbjct: 122 VAMIESLIERGHAYRAANGDVYFDVSTFDRYGELSNRNPDDLRAGARVEIDEAKTDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKA K G+PSWD+P+GPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAEKPGDPSWDAPFGPGRPGWHIECSAMSTRALGATFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMHNG V N EKMSKSLGNFFT+ ++ +YHP +R F++S+HYRSP
Sbjct: 242 SECATGHHYVNYWMHNGFVRINEEKMSKSLGNFFTVAEVMRQYHPEVIRLFVLSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD+A ++ Y ++D +P NP ++ F M
Sbjct: 302 LNYSDQNLDAARASLTRWYTAIKDAPQNGTP----------NP-------EVMARFRGVM 344
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ S LN K + I+++ +I N LG
Sbjct: 345 DDDFNTPEALAIVFEQI-----SELNRSKDANCA----ATIKAIGEILN--------LGQ 387
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P ++ D +L++E + Q I ERA+AR NKDF+ SD+IR +L GI
Sbjct: 388 HDPESFLRWAPSSSD------QLSDEAIEQKIAERASARANKDFAASDRIRDELQAAGIV 441
Query: 498 LMDMGKETIWR 508
L D +T WR
Sbjct: 442 LEDKAGQTTWR 452
>gi|333925975|ref|YP_004499554.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333930928|ref|YP_004504506.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386327799|ref|YP_006023969.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
gi|333472535|gb|AEF44245.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333490035|gb|AEF49197.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333960132|gb|AEG26905.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
Length = 461
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 283/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D AE+ E + LI++R ARK KD++ +D R L
Sbjct: 394 LQQEPEQFLQSGAQADD-----AEVAE--IEALIKQRNDARKAKDWALADAARDRLNEMS 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 482
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/500 (43%), Positives = 299/500 (59%), Gaps = 35/500 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+FTP+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G ++NRY Y M L PRVS H+ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 LKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P + R+ A++
Sbjct: 303 PLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIESLRKIENEV 428
+EF A MSDD NT+ + F A K IN ++ ++ Q ++ ++ + K EV
Sbjct: 354 EEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEV 412
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
VL GA + +QL D ++ R A R+ K ++ +D IR
Sbjct: 413 IGVLEKAWEGNTGADAAEYEQLMD--------------VILSVRQACREQKQWALADCIR 458
Query: 489 ADLTRKGIALMDMGKETIWR 508
L GI + D W+
Sbjct: 459 DRLAEIGITIEDSPAGARWK 478
>gi|429759537|ref|ZP_19292035.1| cysteine--tRNA ligase [Veillonella atypica KON]
gi|429179498|gb|EKY20745.1| cysteine--tRNA ligase [Veillonella atypica KON]
Length = 488
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/500 (43%), Positives = 298/500 (59%), Gaps = 35/500 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+FTP+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 10 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 69
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G ++NRY Y M L PRVS H+ I
Sbjct: 70 TYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDI 129
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 130 LKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 189
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 190 LWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 249
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 250 EGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 308
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P + R+ A++
Sbjct: 309 PLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YE 359
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIESLRKIENEV 428
+EF A MSDD NT+ + F A K IN ++ ++ Q ++ ++ + K EV
Sbjct: 360 EEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEV 418
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
VL GA + +QL D L R A R+ K ++ +D IR
Sbjct: 419 IGVLEKAWEGNTGADAVEYEQLMDVILSV--------------RQACREQKQWALADCIR 464
Query: 489 ADLTRKGIALMDMGKETIWR 508
L GI + D W+
Sbjct: 465 DRLAEIGITIEDSPAGARWK 484
>gi|373106799|ref|ZP_09521099.1| cysteine-tRNA ligase [Stomatobaculum longum]
gi|371651738|gb|EHO17164.1| cysteine-tRNA ligase [Stomatobaculum longum]
Length = 469
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/500 (42%), Positives = 291/500 (58%), Gaps = 43/500 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIY++MT+ KE F I PGKV MYVCG T Y+L H+G+AR + FD + RYLE+ EV
Sbjct: 1 MKIYDTMTRYKEEFRTIEPGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYLEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V NFTDVDDKII+ AN+ G + +S RY E DMA + P +Y PR ++ + +
Sbjct: 61 NFVSNFTDVDDKIIKAANEEGVDASVISERYIVECKKDMAGMNVRPASYNPRATEEIPGM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
+MI ++I+ AYV +G V++ VE P+YG+LS + +E N+AG R V + K +P
Sbjct: 121 IEMIQKLIDGGHAYVAADGTVYYRVESFPDYGKLSHKNVEENQAGLRTLKVRGEEAKEDP 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK K GEP W+SPW GRPGWHIECS MS YL DIHGGG DL+FPHHENE
Sbjct: 181 NDFVLWKPKKEGEPYWESPWCEGRPGWHIECSVMSKKYLGETIDIHGGGEDLVFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V YWMHN + +N KMSKSLGNF T+RQI+E Y LR F++SAHY
Sbjct: 241 IAQSEAVSGKKFVRYWMHNAFLNIDNVKMSKSLGNFKTVRQISEEYDLQVLRFFMLSAHY 300
Query: 315 RSPLNYSVLQLDSAS---DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED---CINK 368
RSPLN+S +D A D + + L+DC A K + A E+ +
Sbjct: 301 RSPLNFSREMMDGAKASLDRILTAMEHLRDCLAA-------AKAEALTGAEEEELAAFDA 353
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
LR++F A M DD NT+ ++ F+ M+K+ + S + +++ +
Sbjct: 354 LREKFEAAMDDDFNTADAISVIFE-----------MVKRANITVTEESSKAYITRVKELL 402
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
++L +LGLL ++ E + V LI ER ARK K+F+++D+IR
Sbjct: 403 DKLLDVLGLLSE---------------RKEENLDARVEALIAERQTARKEKNFARADEIR 447
Query: 489 ADLTRKGIALMDMGKETIWR 508
+LT GI L D + W+
Sbjct: 448 NELTEMGILLEDTKEGVKWK 467
>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 473
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 285/499 (57%), Gaps = 38/499 (7%)
Query: 13 PKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLE 72
P+ LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL
Sbjct: 8 PRNVPMLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLR 67
Query: 73 HLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVS 132
+L +TYVRN TDVDDKII+RA + E L++R E D L P +PR +
Sbjct: 68 YLGYSLTYVRNVTDVDDKIIKRAIENNETCEQLTSRMLAEMHKDFDALNLERPDLEPRAT 127
Query: 133 DHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRK 191
H+ +I ++ ++I D AYV GDV FAV+ P+YG LS Q L+ +AG RV V K
Sbjct: 128 HHIPEIIELTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVK 187
Query: 192 RNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHH 251
RNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHH
Sbjct: 188 RNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHH 247
Query: 252 ENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLIS 311
ENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S
Sbjct: 248 ENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMS 307
Query: 312 AHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD 371
HYRS LNYS L A ++ +Y L+ G A PA +
Sbjct: 308 GHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEA 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F A M DD NT + F I +N LK + I + + E++++
Sbjct: 353 RFRAAMDDDFNTPEAYSVLFD-----IAREVNRLKTED--------IAAANGLAAELRKL 399
Query: 432 LRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+LGLL P + + Q D + + E LI++R AR +KD++ +D R
Sbjct: 400 AHVLGLLEQDPELFLQSGAQTDDDEVAKIE-------ALIKQRNDARSSKDWALADSARD 452
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI L D + T WR
Sbjct: 453 QLNELGIVLEDGPQGTTWR 471
>gi|15641850|ref|NP_231482.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121591342|ref|ZP_01678630.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121730275|ref|ZP_01682651.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|147673703|ref|YP_001217382.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227081977|ref|YP_002810528.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227118296|ref|YP_002820192.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229508055|ref|ZP_04397560.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229511706|ref|ZP_04401185.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229518845|ref|ZP_04408288.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229607616|ref|YP_002878264.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254848934|ref|ZP_05238284.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255745392|ref|ZP_05419341.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|298498113|ref|ZP_07007920.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|360035732|ref|YP_004937495.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379741684|ref|YP_005333653.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|417813891|ref|ZP_12460544.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|417817628|ref|ZP_12464257.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|418334866|ref|ZP_12943780.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|418338484|ref|ZP_12947378.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|418346401|ref|ZP_12951163.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|418350163|ref|ZP_12954894.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|418355542|ref|ZP_12958261.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|419826827|ref|ZP_14350326.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|421318339|ref|ZP_15768907.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|421321620|ref|ZP_15772173.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|421325417|ref|ZP_15775941.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|421329079|ref|ZP_15779589.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|421332987|ref|ZP_15783464.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|421336576|ref|ZP_15787037.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|421340007|ref|ZP_15790439.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|421348335|ref|ZP_15798712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|422896952|ref|ZP_16934405.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|422903151|ref|ZP_16938131.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|422907036|ref|ZP_16941843.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|422913886|ref|ZP_16948392.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|422926092|ref|ZP_16959106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|423145411|ref|ZP_17133005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|423150087|ref|ZP_17137401.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|423153907|ref|ZP_17141088.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|423156990|ref|ZP_17144083.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|423160561|ref|ZP_17147501.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|423165379|ref|ZP_17152110.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|423731398|ref|ZP_17704701.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|423767016|ref|ZP_17712820.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|423895289|ref|ZP_17727036.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|423930727|ref|ZP_17731430.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|424002842|ref|ZP_17745917.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|424006631|ref|ZP_17749601.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|424024612|ref|ZP_17764263.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|424027497|ref|ZP_17767100.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|424586768|ref|ZP_18026347.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|424591511|ref|ZP_18030938.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|424595416|ref|ZP_18034737.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|424599332|ref|ZP_18038513.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|424602052|ref|ZP_18041194.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|424607022|ref|ZP_18045966.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|424610847|ref|ZP_18049686.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|424613658|ref|ZP_18052446.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|424617639|ref|ZP_18056311.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|424622418|ref|ZP_18060926.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|424645383|ref|ZP_18083119.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|424653150|ref|ZP_18090530.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|424656971|ref|ZP_18094256.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|440710051|ref|ZP_20890702.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443504209|ref|ZP_21071167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443508106|ref|ZP_21074870.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443511949|ref|ZP_21078587.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443515507|ref|ZP_21082018.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443519298|ref|ZP_21085695.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443524191|ref|ZP_21090404.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443531789|ref|ZP_21097803.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443535585|ref|ZP_21101463.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443539133|ref|ZP_21104987.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|449055723|ref|ZP_21734391.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
gi|11387140|sp|Q9KQZ9.1|SYC_VIBCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631647|sp|A5F763.1|SYC_VIBC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781697|sp|C3LNF1.1|SYC_VIBCM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|9656376|gb|AAF94996.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121546806|gb|EAX56972.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121627977|gb|EAX60538.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|146315586|gb|ABQ20125.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227009865|gb|ACP06077.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227013746|gb|ACP09956.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229343534|gb|EEO08509.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229351671|gb|EEO16612.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229355560|gb|EEO20481.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229370271|gb|ACQ60694.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254844639|gb|EET23053.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255737222|gb|EET92618.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|297542446|gb|EFH78496.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|340036377|gb|EGQ97353.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|340037351|gb|EGQ98326.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|341621711|gb|EGS47448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|341621796|gb|EGS47529.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|341622546|gb|EGS48200.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|341637547|gb|EGS62225.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|341646298|gb|EGS70412.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|356417575|gb|EHH71190.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|356418447|gb|EHH72044.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|356423021|gb|EHH76482.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|356428467|gb|EHH81693.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|356430126|gb|EHH83335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|356433480|gb|EHH86669.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|356440077|gb|EHH93038.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|356444659|gb|EHH97468.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|356445658|gb|EHH98460.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|356451191|gb|EHI03892.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|356452040|gb|EHI04719.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|356646886|gb|AET26941.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795194|gb|AFC58665.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|395916597|gb|EJH27427.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|395917255|gb|EJH28083.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|395918614|gb|EJH29438.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|395927613|gb|EJH38376.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|395928389|gb|EJH39142.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|395931675|gb|EJH42419.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|395939290|gb|EJH49972.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|395942914|gb|EJH53590.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|395958976|gb|EJH69427.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|395959689|gb|EJH70106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|395962555|gb|EJH72851.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|395970947|gb|EJH80652.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|395973689|gb|EJH83243.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|395976039|gb|EJH85503.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|408007296|gb|EKG45379.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|408013276|gb|EKG51005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|408031528|gb|EKG68144.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|408032309|gb|EKG68895.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|408041832|gb|EKG77920.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|408043299|gb|EKG79300.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|408053849|gb|EKG88848.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|408607617|gb|EKK81020.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|408624020|gb|EKK96972.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|408633949|gb|EKL06229.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|408654159|gb|EKL25301.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|408655089|gb|EKL26214.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|408845239|gb|EKL85355.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|408846012|gb|EKL86124.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|408870174|gb|EKM09454.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|408878800|gb|EKM17793.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|439974274|gb|ELP50451.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443431154|gb|ELS73706.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443435312|gb|ELS81455.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443438932|gb|ELS88647.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443442917|gb|ELS96219.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443447094|gb|ELT03749.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443449525|gb|ELT09816.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443457179|gb|ELT24576.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443461125|gb|ELT32198.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443465233|gb|ELT39893.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|448264762|gb|EMB01999.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
Length = 459
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 290/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA E+ + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEEYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
P +A + +ED Q LI+ R +R KD++ +D R L
Sbjct: 395 YQEP-------------EAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 EMGIVLEDGPNGTTWR 457
>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
gi|158448209|gb|EDP25204.1| cysteine--tRNA ligase [Coprococcus eutactus ATCC 27759]
Length = 463
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 291/493 (59%), Gaps = 35/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI N++T++KE F PI GKVG+YVCG T YD H+G+AR + FD L RYLE+ EV
Sbjct: 1 MKILNTLTRRKEEFKPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII+RAN G + +S RY E DMA L T P+ ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKRANAEGVDASVISERYIAEVKKDMAALNVREATTHPKATEEIPDM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
+M+ +I D AY V G V+F K +YG+LS + +++ R+G R V+ K +P
Sbjct: 121 IEMVKTLIEKDYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSGIDEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPWG GRPGWH+ECS MS Y+ DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHNG + NNEKMSKSLGNFFT+R+I E+Y +R F++SAHYR
Sbjct: 241 AQSEAANGTEFARYWMHNGFLKINNEKMSKSLGNFFTVREIAEKYPLQVIRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLN+S ++++ + + I + + +G ++ + D ++ ++
Sbjct: 301 SPLNFSAELVEASKNGLERILTAVDRLKSI------NGIDGDVDKSVADEMDAFVKKYED 354
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLNT+ ++ F+ +K+ N +N+ ++ +L L N ++++ IL
Sbjct: 355 AMDDDLNTADAISVIFE-LVKYAN--VNVTEESSKATVELVL--------NTIEKLCDIL 403
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G++ K+ E+ + D+ LIEER AARK K+F+++D+IR L+ G
Sbjct: 404 GIITE---------------KKEEILDSDIEALIEERQAARKAKNFARADEIRDQLSSMG 448
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 449 IILEDTREGVKWK 461
>gi|359440396|ref|ZP_09230316.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|359456073|ref|ZP_09245267.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
gi|392534096|ref|ZP_10281233.1| cysteinyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
gi|358037709|dbj|GAA66565.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|358046880|dbj|GAA81516.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
Length = 459
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 285/494 (57%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IVMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ + Y P ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDPESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D E + N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRDVEPVECDLEG---------------NEFVAKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILG 436
+DD NT L F+ + LN +K+ Q QL+ I LR I N +LG
Sbjct: 347 NDDFNTPEALPVLFE-----LAKELNRVKESDAVQAGQLAFI--LRSIGN-------VLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
V QQ + L+ + +E + LI +R AR +K+++ +D+ R L
Sbjct: 393 ---------VAQQAPEAFLQGGQDDDEVATIEALIVKRNEARASKNWAAADEARDALNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 444 GVILEDSAGKTTWR 457
>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
Length = 475
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/511 (43%), Positives = 290/511 (56%), Gaps = 55/511 (10%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 1 MNMT-TIYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 60 GYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDANALGVLRPDIEPKATEN 119
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 120 IPQMIAMIETLIQNSKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 179
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + L FDIHGGG DL FPHHEN
Sbjct: 180 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLLGDTFDIHGGGADLQFPHHEN 239
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 240 EIAQSVGASGHSCGHNHAQTHYGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 299
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 300 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---- 355
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
N F+A M+DD T + F+ L + K L
Sbjct: 356 ---------NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHL 394
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 477
L+ + I+GLL + ++ L+ A+ L+ E++ LI R AR
Sbjct: 395 AGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARA 442
Query: 478 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
+K++ +SD+IR L I L D T WR
Sbjct: 443 DKNWVESDRIRDLLNEHKIILEDNAGGTTWR 473
>gi|270157070|ref|ZP_06185727.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
gi|269989095|gb|EEZ95349.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
Length = 464
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 286/491 (58%), Gaps = 42/491 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T+ KE F I PGK+G+YVCG+T YD H+GHAR+ V+FD++ RYL +V
Sbjct: 12 LHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGYDV 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII RA++ L+ +Y D L LPP +PR +DH+ I
Sbjct: 72 KYIRNITDIDDKIIARAHERAIPIDELTAQYIAAMNEDTQALNILPPDVEPRATDHIHSI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AY+ + GDV + V +YG+LS + LE AG RV + KR+P DF
Sbjct: 132 IHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEIVKEKRSPLDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 192 VLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + +YW+H G + NNEKMSKSLGNFFTI + ++HP +R+FL+S+HYRS
Sbjct: 252 SEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHHPEVVRYFLLSSHYRSS 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L +A A+ +YQT++D S F G + N +EF+ M
Sbjct: 312 LNYSEENLANAKKALTRLYQTIKD-----SRFIADG----------ELDNHWINEFNQAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L+ FQ L + K L +L+ + N + L L
Sbjct: 357 NDDFNTPVALSVMFQ------------LSHEVNKSNSPILAATLKYLGNTMG-----LLL 399
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P ++ + +DKA + QLI ER AR +++ ++DQIRADL +GI
Sbjct: 400 TDPSSFLQSGLDDEDKA---------SIEQLINERLQARTERNWERADQIRADLLSRGIE 450
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 451 LEDGANGTTWR 461
>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
Length = 459
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/496 (44%), Positives = 286/496 (57%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P ++GMYVCGVT YDL H GH R VSFD++ RYL + V
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV E GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YSV LD A A+ +Y +L+ C+V S E G+ + F M
Sbjct: 302 LDYSVENLDLARSALERLYTSLRGCDV--SGVAEGGE-------------HYVEAFKTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN---EVKEVLRI 434
DD NT L F+ I LN LK IE + K +KE+ +
Sbjct: 347 DDDFNTPGALAVLFE-----IARELNKLK-----------IEDMAKANGLAVRLKELAGV 390
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLT 492
LGL L+Q + L+ ++E ++ LI++R A+ NK+++ +D++R L
Sbjct: 391 LGL---------LEQEPESFLQGDTNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLK 441
Query: 493 RKGIALMDMGKETIWR 508
I L D TIWR
Sbjct: 442 AMNIVLEDTPNGTIWR 457
>gi|401679837|ref|ZP_10811761.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
gi|400218964|gb|EJO49835.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
Length = 482
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/500 (43%), Positives = 298/500 (59%), Gaps = 35/500 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+MT+QKE+FTP+ PG+ MYVCGVT Y+ H+G+AR V++D++ RY++H+ +V
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGYKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII +N G ++NRY Y M L PRVS H+ I
Sbjct: 64 TYVQNFTDVDDKIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFA
Sbjct: 124 LKMISTLIDKGFAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 --CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRS
Sbjct: 244 EGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRS 302
Query: 317 PLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
PL++S +L+ A+ ++ + L+ CE P + R+ A++
Sbjct: 303 PLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YE 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIESLRKIENEV 428
+EF MSDD NT+ + F A K IN + ++ Q+ ++ ++ + K EV
Sbjct: 354 EEFEVAMSDDFNTALATSSMFGLA-KEINIYYQAVTGREGVVCQEAIAEVKRIFKFMTEV 412
Query: 429 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
VL GA + +QL D L R A R+ K ++ +D IR
Sbjct: 413 IGVLEKAWEGNTGADAVEYEQLMDVILSV--------------RQACREQKQWALADCIR 458
Query: 489 ADLTRKGIALMDMGKETIWR 508
L GI + D W+
Sbjct: 459 DRLAEIGITIEDSPTGARWK 478
>gi|365157349|ref|ZP_09353622.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
gi|363625250|gb|EHL76292.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
Length = 465
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/497 (41%), Positives = 296/497 (59%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + RYLE
Sbjct: 1 MPIQLYNTLTRRKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR A +LGE+ +L+NR+ + Y D+ L C PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIRAARELGEDVPTLANRFIRAYFEDVEALGCKRADIHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I + AY V+GDV++ K +YG+LS Q ++ + G R+ V +K + D
Sbjct: 121 IIIEFIRTLEEKGYAYEVDGDVYYRTRKFKDYGKLSHQSIDELKVGARIEVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM+ HYL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMARHYLGDTIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I +++ P ALR F++S HYR
Sbjct: 241 QSEALSGKTFARYWMHNGYININNEKMSKSLGNFVLVHDIIQKHDPDALRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRD 371
P+NYS L++A ++ + + Q+ +H K A N D I KL D
Sbjct: 301 PINYSEELLENAKTSLERLKTSYQNL--------KHRKEASTNLTENDHEWIEKIQKLHD 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
EF M DD NT++ ++ F+ + + ++ +++K ++ +I + K E +++
Sbjct: 353 EFVKEMDDDFNTANAISVLFELSRQ---ANYYLMEKHTSEK----VISAFMK---EFEDL 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGL L+ E +E++ QLIE+R ARK ++F +D+IR L
Sbjct: 403 FSVLGL----------------KLEVNEWLDEEIEQLIEKRNQARKERNFQLADEIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KNMNIILEDTPQGTRWK 463
>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 473
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/507 (42%), Positives = 288/507 (56%), Gaps = 54/507 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LNIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 242 SVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAKFDLFEN--------- 352
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+N F+A M+DD T + F+ L + K L L
Sbjct: 353 ----VNDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCL 396
Query: 422 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ + I+GLL + ++ L+ A+ L+ E++ LI R AR +K++
Sbjct: 397 KALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNW 444
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR L I L D T WR
Sbjct: 445 AESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|384129119|ref|YP_005511732.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 490
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/499 (40%), Positives = 298/499 (59%), Gaps = 18/499 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN+++ + E F P+ P KV +Y CGVT YD SH+GH R+ + FD+ RYLEHL
Sbjct: 1 MSLKIYNTLSGKVEEFVPLNPPKVYIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEHLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +VRNFTDVDDKII RA + + ++++NRY Y +DM ++ P +PRV++H++
Sbjct: 61 KVKFVRNFTDVDDKIINRAKEENTDFMTIANRYIASYYIDMESIKVKPADVEPRVTEHLQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I D+I ++ AY GDV+F+V+ P YG+LS + E G RV +KR+P D
Sbjct: 121 EIIDVIKGLVEKGYAYESGGDVYFSVKAFPEYGKLSKRSTEELEVGARVEPSEKKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AKAGEP+W+SPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIA
Sbjct: 181 FALWKSAKAGEPAWESPWGLGRPGWHTECVAMVFKHLGKTIDIHGGGLDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YWMHNG VT +KMSKSLGN+ T+R++ RYHP LR ++ HYRS
Sbjct: 241 QAEALTGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYRRYHPDVLRLLVLFTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ--EHGKTARINPAAEDCINKLRDEFH 374
PL++S +++ A A I ++D ++ L Q E K +++ + + + + F
Sbjct: 301 PLDFSWEKMEEAKRAYERIRHAIEDLDM-LKNLQVVEENKISQLY----EKVKEAEEAFF 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR- 433
+S+D NT L+ F + L +K + ++++S + L E V +LR
Sbjct: 356 EDLSEDFNTPSALSHIFA-----LVGELGKVKSRAISERRISR-QDLSAYEFAVSSILRH 409
Query: 434 ---ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRA 489
I GL + ++++ + L+ ++ +E ++ L++ R AR K F +D IR
Sbjct: 410 MRGIFGLFEDIYPEKPVREVVRRELEAGQVLDERLIDILVDVRNQARAEKVFKIADYIRD 469
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI L D T WR
Sbjct: 470 RLKEVGIVLEDTPAGTKWR 488
>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
Length = 462
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 290/491 (59%), Gaps = 33/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L +V
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTESLIERGHAYVADNGDVMFEVKTDPSYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ + + +P A I K R F M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDKSATP-------------AGGEIYKSR--FCEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A LN LK + +++ + +++E+ ++LGL
Sbjct: 347 NDDFNTPEAYSALFDMA-----RELNRLKTEN--------MDAANGMAAQLRELAKVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E Q ++ AE+ + + LI++R AR++KD++ +DQ R LT GI
Sbjct: 394 LEQD--PETFLQGGAQSEDDAEVAK--IEALIKQRNDARQSKDWALADQARDALTAMGIV 449
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 450 LEDSSAGTTWR 460
>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 476
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/499 (43%), Positives = 296/499 (59%), Gaps = 34/499 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+KIYN++ ++KE F P GKV MY CG T Y+ HLG+AR V FD++ RYL +
Sbjct: 1 MTVKIYNTIHKEKEEFIPREAGKVAMYACGPTTYNYFHLGNARMLVVFDMVRRYLAYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYV+NFTDVDDKII+RA++ PL+L+ RY +EY D L P T P+ +DH++
Sbjct: 61 EVTYVQNFTDVDDKIIKRASEENCEPLALAGRYIEEYYKDANALNIQPATVHPKATDHIK 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + AY VEGDV+FAVE P YGRLSG+ LE+ +AG RV +D +K NP D
Sbjct: 121 EMIEIIKGLEKKGLAYPVEGDVYFAVEHFPQYGRLSGRNLEDLQAGARVEIDDKKLNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP+W SPWG GRPGWHIECSAM+ YL FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKAKPGEPAWPSPWGDGRPGWHIECSAMALKYLGPNFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + YWMHN +T N EKMSKSLGNFF IR I +++ +R +L+ HYR
Sbjct: 241 QSEGYLDGEQFARYWMHNAFITVNQEKMSKSLGNFFMIRDILKKFPGEVVRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDE 372
SPL++ +L+ A+ + + +++ ALS GK+ + +N K R
Sbjct: 301 SPLDFDDEKLEMAARGLDRLKTSVRLAGEALS----KGKSTDSAGTRGELLNASSKARAA 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKE 430
F M DD N++ F D K IN++LN Q + + +LI +
Sbjct: 357 FEEAMEDDFNSAQAYASLF-DLAKEINTALNEGGWTGAQIAEARDTLI-----------D 404
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEED-VLQLI-EERAAARKNKDFSKSDQIR 488
+ ILG LQ KD + E + + V++L+ E RA AR +KD+S +D IR
Sbjct: 405 LAGILGF--------DLQ--KDSEVPAGESGKFNAVMELVLELRAKARADKDWSTADLIR 454
Query: 489 ADLTRKGIALMDMGKETIW 507
L I L D + + W
Sbjct: 455 DRLKEASIILEDTAEGSRW 473
>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
gi|254781689|sp|C0QRE6.1|SYC_PERMH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
Length = 487
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/498 (41%), Positives = 292/498 (58%), Gaps = 19/498 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK+YN++T +KE F PI PG+V +Y CGVT YD++H+GH R+ + FD++ RYL +L
Sbjct: 1 MSLKVYNTLTGKKEEFVPIKPGEVKIYTCGVTVYDVNHVGHGRSLIVFDVIRRYLRYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +VRNFTDVDDKII RA + +++RY +EY D + + P +PRV+ H+
Sbjct: 61 NVYFVRNFTDVDDKIINRAKNECLPFTVIADRYIKEYFQDAENFRIEPADVEPRVTTHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++I+ AY VEGDV+F+V K YG+LS + ++ AG RV +KR+P D
Sbjct: 121 DIIDFIQRLIDKGYAYEVEGDVYFSVRKFKEYGKLSKRSVDELIAGARVEPGEKKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA+KAGEP+WDSPWG GRPGWH EC AM +L DIHGGG+DL FPHHENE+A
Sbjct: 181 FALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENELA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YW+HNG VT N +KMSKSLGN+ T+++I +Y P LR ++S HYRS
Sbjct: 241 QAEALSDKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYSKYDPDVLRLLVLSVHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +++ A Y+ L+ ++ + + D I K F+A
Sbjct: 301 PLDFSWEKMEETKKA----YERLKGAIDEYEILKKLPENPDFDEHLYDEIAKAEQGFYAA 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEV----KE 430
MSDD NT L F + +N+L+ K K +S +ES ++ + + KE
Sbjct: 357 MSDDFNTPEALASLFT-----LVREMNILRDKAVKSGGISKKALESYKEASDVLHSIGKE 411
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+ + L P E ++ K + +L E LIE R ARK K F +D IR
Sbjct: 412 IFGLFDSLQPCIEVEEIKVEKAEEKIDTQLVE----ALIEVRNKARKEKQFEIADYIREK 467
Query: 491 LTRKGIALMDMGKETIWR 508
L++ GI + D T W+
Sbjct: 468 LSQLGIVIEDTPVGTKWK 485
>gi|366163863|ref|ZP_09463618.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 467
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/493 (41%), Positives = 293/493 (59%), Gaps = 31/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F PI +V MY CG T Y+ H+G+AR + FD + RYLE+ +V
Sbjct: 1 MKIYNTLTRKKEEFVPINEKEVRMYSCGPTVYNYFHIGNARPFIIFDTVRRYLEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I+RAN+ G L++R+ +EY +D L T P+ +++++ I
Sbjct: 61 KFVQNFTDIDDKMIKRANEEGITVKDLADRFIKEYFIDAKGLGIDEATVHPKATENIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I ++ N AY V GDV+F++ K YG+LS LE+ G V VD RK+NP DFA
Sbjct: 121 IDLIKKLEENGFAYNVNGDVYFSIGKFKEYGKLSHHSLEDLAIGSSVNVDERKQNPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 VWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMHNG + NNEKMSKS GNFFT+R I E++ +R F++SAHYRSP+
Sbjct: 241 EAASGKPFAKYWMHNGFINVNNEKMSKSAGNFFTVRDIVEKFDYEVIRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L+ A + + IY L + L EH + ++ + ++L + +F
Sbjct: 301 NFSADLLEQAQNGLERIYNCLDN----LVYLGEHAQAKEMSDEEKSLQSRLLEIKGKFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLNT+ + F D +K +NS N+ ++ + SL ++E+ +L
Sbjct: 357 GMDDDLNTADAIAAIF-DIVKEVNS--NITASSNSSKEIIDFSHSL------IRELGGVL 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G + Q+ K+ L + +V LI +R ARK K++ SD+IR L G
Sbjct: 408 G---------IGQKQKENNL------DSEVEALISQRQQARKEKNWKLSDEIRDKLKDMG 452
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 453 IVLEDTPQGVKWK 465
>gi|30260280|ref|NP_842657.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47525344|ref|YP_016693.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183123|ref|YP_026375.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49481691|ref|YP_034442.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145127|ref|YP_081701.1| cysteinyl-tRNA synthetase [Bacillus cereus E33L]
gi|65317550|ref|ZP_00390509.1| COG0215: Cysteinyl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|165873141|ref|ZP_02217757.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167635089|ref|ZP_02393406.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167641949|ref|ZP_02400184.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170689572|ref|ZP_02880758.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707565|ref|ZP_02898018.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177655593|ref|ZP_02936974.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196041797|ref|ZP_03109087.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218901292|ref|YP_002449126.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227812763|ref|YP_002812772.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|229601947|ref|YP_002864741.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0248]
gi|254684407|ref|ZP_05148267.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254733756|ref|ZP_05191471.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254756312|ref|ZP_05208341.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|254758390|ref|ZP_05210417.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|300119599|ref|ZP_07057143.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|386733956|ref|YP_006207137.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|421510415|ref|ZP_15957308.1| cysteinyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|421640503|ref|ZP_16081085.1| cysteinyl-tRNA ligase [Bacillus anthracis str. BF1]
gi|423553976|ref|ZP_17530303.1| cysteinyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|33301677|sp|Q81VV1.1|SYC_BACAN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216160|sp|Q63HB0.1|SYC_BACCZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216199|sp|Q6HPS8.1|SYC_BACHK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735045|sp|B7JK97.1|SYC_BACC0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765175|sp|C3P9N5.1|SYC_BACAA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765176|sp|C3LJ62.1|SYC_BACAC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30253601|gb|AAP24143.1| cysteine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47500492|gb|AAT29168.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177050|gb|AAT52426.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49333247|gb|AAT63893.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978596|gb|AAU20146.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus cereus
E33L]
gi|164711121|gb|EDR16682.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167510080|gb|EDR85491.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529563|gb|EDR92313.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170127561|gb|EDS96435.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170666485|gb|EDT17262.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172080057|gb|EDT65155.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196027417|gb|EDX66034.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218537598|gb|ACK89996.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227004950|gb|ACP14693.1| cysteine--tRNA ligase [Bacillus anthracis str. CDC 684]
gi|229266355|gb|ACQ47992.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
gi|298723071|gb|EFI63969.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|384383808|gb|AFH81469.1| Cysteinyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|401182183|gb|EJQ89322.1| cysteinyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|401819497|gb|EJT18674.1| cysteinyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|403392319|gb|EJY89573.1| cysteinyl-tRNA ligase [Bacillus anthracis str. BF1]
Length = 465
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE FTP+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|343514072|ref|ZP_08751154.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
gi|342800738|gb|EGU36249.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
Length = 460
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 289/491 (58%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG RV ++S KR+P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDIESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++++ AR N A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLSVEAAGGDEYQARFNDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F I +N LK + +Q +L + ++ EV+ IL
Sbjct: 347 NDDFNTPEAYSVLFD-----IAREINRLKAENIEQAS-----ALGVVMRQMAEVIGIL-- 394
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + LK A E+ E + LI+ R +R +KD++ +D R L GI
Sbjct: 395 -----HQDAEAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNEMGIE 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGAEGTTWR 458
>gi|403675335|ref|ZP_10937514.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 10304]
Length = 473
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 297/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR +TE++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVTEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 459
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/492 (44%), Positives = 282/492 (57%), Gaps = 38/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P ++GMYVCGVT YDL H GH R VSFD++ RYL + V
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV E GDV F VE YG LS Q LE +AG RV + S K+NP DF
Sbjct: 122 VAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YSV LD A A+ +Y L+ C+V+ A + + F M
Sbjct: 302 LDYSVENLDLARSALERLYTALRGCDVS---------------GAAEGGEHYVEAFKTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ I LN LK + K L++ +KE+ +LG
Sbjct: 347 DDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLAV---------RLKELAGVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL E Q + + AE+ LI++R A+ NK+++ +D++R L I
Sbjct: 393 LLEQD--PESFLQGDTNSDEAAEIE-----ALIKQRNEAKANKNWAVADEVRDKLKAMNI 445
Query: 497 ALMDMGKETIWR 508
L D TIWR
Sbjct: 446 VLEDTPNGTIWR 457
>gi|359298707|ref|ZP_09184546.1| cysteinyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304648|ref|ZP_10823714.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400377443|gb|EJP30320.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 459
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 283/493 (57%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL +L +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E +L R E D DL L P +PR + H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDALVERMIAEMHKDFDDLNILRPDVEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F VE YG LS Q L +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIAKGHAYVAADGDVMFDVESFSQYGALSRQNLAQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGNGRPGWHIECSAMNSQELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHGGEYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YSV LD A A+ +Y L+ C++ ++P E I+ F M
Sbjct: 302 LDYSVDNLDLARSALERLYTALRGCDLTVAP-----------AGGEQYISA----FETAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L F+ I +N LK + P Q + +K + +LGL
Sbjct: 347 NDDFNTPGALAVLFE-----IAREVNKLKAEDPAQAN--------GLAVRLKALAGVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L+Q + LK +E ++ LI +R A+ K+++ +D++R L
Sbjct: 394 ---------LEQDPESFLKGESNADEAAEIEALIAKRNEAKAAKNWAVADEVRDKLKAMN 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDTPNGTTWR 457
>gi|424659553|ref|ZP_18096802.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
gi|408052108|gb|EKG87167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
Length = 459
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/496 (43%), Positives = 290/496 (58%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PIV GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E SL+ R QE D L P +PR + ++E+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENEETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNYS L+ A ++ +Y L+ + R PAA ED + + F A
Sbjct: 302 LNYSEENLNQARASLERLYNALRGLD-------------RSVPAAGGEDYVTR----FTA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F D + IN + K + ++ +L + E+ +V+ IL
Sbjct: 345 AMNDDFNTPEAYSVLF-DMAREIN---------RLKSEDMTNASALGSLMRELADVIGIL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
P +A + +ED Q LI+ R +R KD++ +D R L
Sbjct: 395 YQEP-------------EAFFQGSAEDEDAAQIEALIKLRNDSRAAKDWANADLARDKLN 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 EMGIVLEDGPNGTTWR 457
>gi|388456175|ref|ZP_10138470.1| cysteinyl-tRNA ligase [Fluoribacter dumoffii Tex-KL]
Length = 454
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 294/494 (59%), Gaps = 48/494 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++NS+T++KE F I PGK+G+YVCG+T YD H+GHAR+ VSFD++ RYL +V
Sbjct: 2 LHLFNSLTRKKEPFVSISPGKIGIYVCGITVYDHCHIGHARSMVSFDVIVRYLRSQGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII RA++ L+ +Y D L LPP +PR ++H+E I
Sbjct: 62 KYVRNITDIDDKIIARAHERAIPIDDLTAQYIAAMNEDTKALNILPPDVEPRATEHIESI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AY+ + GDV + V+ +YG+LS + LE AG RV V KR+P DF
Sbjct: 122 IRLIERLLEKGNAYLSDNGDVCYQVDSFADYGKLSHKDLEGLVAGARVEVVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMGELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + +YW+H G + NNEKMSKSLGNF+TI + ++HP +R+FL+S+HYRS
Sbjct: 242 SEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFYTIADVLAKHHPEVVRYFLLSSHYRSS 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L ++ A+ +YQ L+D +V P E N EF+ M
Sbjct: 302 LNYSEENLLNSRKALARLYQALKDSQVI--------------PDGE-MDNHWISEFNQAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L+ FQ + + IN S +++ + N +K + I+G+
Sbjct: 347 NDDFNTPVALSVLFQLSHE-INKSRSVI------------------LANTLKYLAGIMGI 387
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEED---VLQLIEERAAARKNKDFSKSDQIRADLTRK 494
L Q + ++ EED + +LI ER AR +K++ ++DQIRADL ++
Sbjct: 388 L----------QEDPASFLQSGFAEEDKTEIEELIAERLQARADKNWGRADQIRADLLKR 437
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 438 GIELEDGPNGTTWR 451
>gi|374300824|ref|YP_005052463.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
gi|332553760|gb|EGJ50804.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
Length = 485
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 291/493 (59%), Gaps = 15/493 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++ ++KE F P VPGKV MYVCG+TAYDL H+GHAR+AV FD+L RYL EV
Sbjct: 1 MQLYNTLRRKKESFEPRVPGKVSMYVCGITAYDLCHIGHARSAVVFDILVRYLRSTGLEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T++RNFTDVDDKII RAN+ G + ++ +Y + + DM L L +P+ ++H+ ++
Sbjct: 61 TFIRNFTDVDDKIINRANERGVSSQEIAEKYIKTFHEDMDKLNVLRADIEPKCTEHIPEM 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I D AY + GDV+F V YG+LSG+ +++ RAG R+ K +P DF
Sbjct: 121 LTLTGELIAKDRAYKTLSGDVYFRVRAFEPYGKLSGRDIDDLRAGARITPGEAKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK+AK EP W+SPWG GRPGWH+ECSAM+A Y+ DIHGGG DLIFPHHENEIAQ
Sbjct: 181 ALWKSAKPNEPFWESPWGKGRPGWHLECSAMAAKYVDLPLDIHGGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ AA +W+HNG V N EKMSKSLGNFFTIR I +++ P LR FL+ HYRSP
Sbjct: 241 TEAATDGELARFWVHNGFVQINQEKMSKSLGNFFTIRDILDKFMPEVLRFFLLGQHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S L+ A + IY + AL + GK A + D ++ + M
Sbjct: 301 LDFSFESLEEAEKGLRRIYAAMGQMREALQK-DKWGKAA-LPTEITDELSTAEKAWDEAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLN---MLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
+DDLNT+ L F A++ ++ M K + + ++++L + +V +
Sbjct: 359 TDDLNTAAALGHVFT-AVRLAGRVMDDKAMRKSEGARNFWQRVLDNLARW----SQVFGV 413
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P E L +L+ +R + V L+ +R AR KDF+ SD IR +L
Sbjct: 414 FYSQP----QEFLDELRACRARRKGIDTAKVEALLTQRQEARAGKDFASSDAIRDELAAM 469
Query: 495 GIALMDMGKETIW 507
G + D + W
Sbjct: 470 GAEVKDTPQGQTW 482
>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 461
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTERLIAREHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKAED--------MTAANALAAELRKLAHVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQSGAQTDDDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDGPQGTIWR 459
>gi|418289253|ref|ZP_12901614.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
gi|372199990|gb|EHP14134.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
Length = 473
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/505 (43%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKELF PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKELFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|395235526|ref|ZP_10413735.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
gi|394729760|gb|EJF29694.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
Length = 461
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 283/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL L E+
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRSLGYEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ GE+ ++L +R E D L P +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRAHENGEDFVALVDRMVVEMHKDFDALNISRPNSEPRATKHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q++ D AYV E GDV F+V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEIVEQLLARDHAYVAENGDVMFSVLTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPAWTSPWGEGRPGWHIECSAMNCKELGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ WMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNTWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ + +++P AR F M
Sbjct: 302 LNYSEENLKQARSALERLYTSLRGTDSSVAPAGGEAFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + +++ ILGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKAEDLAAANGLAAAL--------RKLSAILGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R AR++KD++ +DQ R L G
Sbjct: 394 LEQDPEQFLQGGAQADDGEVAEIE-------ALIKQRNDARQSKDWALADQARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 447 IVLEDGAGGTTWR 459
>gi|160933144|ref|ZP_02080533.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
gi|156868218|gb|EDO61590.1| cysteine--tRNA ligase [Clostridium leptum DSM 753]
Length = 470
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/496 (42%), Positives = 300/496 (60%), Gaps = 37/496 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N++T+QKE F PI PG+ +Y CG T Y+ H+G+AR FD+L RYLE+ +V
Sbjct: 1 MKIFNTLTRQKEEFVPIAPGEAKIYACGPTVYNFIHIGNARPMCVFDILRRYLEYRGMKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+V+NFTD+DDKIIR+AN+ + L+++ RY QEY D L T PR ++ MEQI
Sbjct: 61 TFVQNFTDIDDKIIRKANEEKTDYLTVAERYIQEYKTDARGLNIREATVHPRATETMEQI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I+ ++ AY E GDV+F K YG+LS Q LE AG R+ V K +P DF
Sbjct: 121 IEIISDLVKKGYAYPAENGDVYFRTLKFSGYGKLSHQPLEELEAGARIGVGESKEDPMDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GEP WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPYWDSPWGKGRPGWHIECSAMARTYLGDTIDIHCGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S YWMHNG++ +N KMSKSL NFFT+R++ + + +R+ ++++HYRSP
Sbjct: 241 SECCNGVPFAHYWMHNGYINVDNRKMSKSLNNFFTVREVAKEFGYEPIRYLMVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
+NYSV L + A+ +Y ++ E +S + G+ AR ++ I K +E+ R
Sbjct: 301 INYSVDLLKQCTAALERLYTCRENLEFVVSNAKP-GREAR-----DEEIKKRLEEYQNRF 354
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQLSLIESLRKIENEVKEV 431
M DDLNT+ + F+ A K IN++L+ K+ ++ L+L SL
Sbjct: 355 CEAMDDDLNTADAIAVLFELA-KDINTNLSTATNPHKEIAEEALTLFNSLAD-------- 405
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL V + KD +E++ LI+ R ARKNK+++++D+IR +L
Sbjct: 406 --VLGLL------YVKKDTKDS-------LDEEIENLIQRRVEARKNKNWAEADRIRDEL 450
Query: 492 TRKGIALMDMGKETIW 507
+ + + L D + T W
Sbjct: 451 SARHVVLEDTPQGTKW 466
>gi|138893764|ref|YP_001124217.1| cysteinyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
gi|196251125|ref|ZP_03149804.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
gi|166200148|sp|A4IJG8.1|SYC_GEOTN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134265277|gb|ABO65472.1| Cysteine-tRNA ligase [Geobacillus thermodenitrificans NG80-2]
gi|196209366|gb|EDY04146.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
Length = 467
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/495 (42%), Positives = 293/495 (59%), Gaps = 37/495 (7%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++++YN++T++KE F P+ P KV MYVCG T Y+ H+G+ARAA+ FD + RYLE +
Sbjct: 3 SIRLYNTLTRKKETFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYV NFTDVDDK+IR A +LGE+ +++ R+ + Y D+ L C PRV++++E
Sbjct: 63 VTYVSNFTDVDDKLIRAARELGESVPAIAERFIEAYFEDIEALGCKKADIHPRVTENIET 122
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I + I +I+ AY V+GDV++ K YG+LS Q ++ +AG R+ V +K +P DF
Sbjct: 123 IIEFIQALIDKGYAYEVDGDVYYRTRKFDGYGKLSHQSIDELQAGARIEVGEKKDDPLDF 182
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GE SWDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQ
Sbjct: 183 ALWKAAKEGEISWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQ 242
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A YW+HNG++ NNEKMSKSLGNF + I + P LR F++S HYR P
Sbjct: 243 SEALTGKPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDIIRQIDPQVLRFFMLSVHYRHP 302
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINKLRD---EF 373
+NYS L+SA + L+ A Q G + + + +++L D F
Sbjct: 303 INYSEELLESAR-------RGLERLRTAYGNLQHRLGASTNLTDNDGEWLSRLADIRASF 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ + F+ A K N L Q K ++I + + E ++++
Sbjct: 356 IREMDDDFNTANGIAVLFELA-KQANLYL------QEKTTSENVIHAFLR---EFEQLMD 405
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGL LK+ EL +E++ LI +R ARKN+DF+ +D+IR +L
Sbjct: 406 VLGL----------------TLKQEELLDEEIEALIRQRNEARKNRDFALADRIRDELKA 449
Query: 494 KGIALMDMGKETIWR 508
K I L D + T W+
Sbjct: 450 KNIILEDTPQGTRWK 464
>gi|289164517|ref|YP_003454655.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
gi|288857690|emb|CBJ11533.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
Length = 454
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 286/491 (58%), Gaps = 42/491 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YNS+T+ KE F I PGK+G+YVCG+T YD H+GHAR+ V+FD++ RYL +V
Sbjct: 2 LHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII RA++ L+ +Y D L LPP +PR +DH+ I
Sbjct: 62 KYIRNITDIDDKIIARAHERAIPIDELTAQYIAAMNEDTQALNILPPDVEPRATDHIHSI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AY+ + GDV + V +YG+LS + LE AG RV + KR+P DF
Sbjct: 122 IHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEIVKEKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEPSW SPWG GRPGWHIECSAM+ L +FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + +YW+H G + NNEKMSKSLGNFFTI + ++HP +R+FL+S+HYRS
Sbjct: 242 SEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHHPEVVRYFLLSSHYRSS 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L +A A+ +YQT++D S F G + N +EF+ M
Sbjct: 302 LNYSEENLANAKKALTRLYQTIKD-----SRFIADG----------ELDNHWINEFNQAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L+ FQ L + K L +L+ + N + L L
Sbjct: 347 NDDFNTPVALSVMFQ------------LSHEVNKSNSPILAATLKYLGNTMG-----LLL 389
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P ++ + +DKA + QLI ER AR +++ ++DQIRADL +GI
Sbjct: 390 TDPSSFLQSGLDDEDKA---------SIEQLINERLQARTERNWERADQIRADLLSRGIE 440
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 441 LEDGANGTTWR 451
>gi|423405186|ref|ZP_17382359.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|423462636|ref|ZP_17439430.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|423480029|ref|ZP_17456743.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
gi|401130815|gb|EJQ38471.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|401645556|gb|EJS63211.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|402424013|gb|EJV56209.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
Length = 465
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/495 (42%), Positives = 298/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE FTP+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|354558420|ref|ZP_08977675.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353546898|gb|EHC16345.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 478
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 286/492 (58%), Gaps = 19/492 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LK++N+M+ QKE F P GKV MY CG T Y+ H+G+ R V FD++ RYL + +
Sbjct: 1 MSLKLFNTMSHQKEEFKPRESGKVAMYTCGPTVYNYVHVGNGRMLVVFDMIRRYLMYKEY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTDVDDKII+R + G +PL+LS +Y +EY D L LP T P+ ++H+
Sbjct: 61 DVTFVQNFTDVDDKIIKRGLEEGVDPLTLSRKYIEEYFKDAKALHVLPATVHPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I +I AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV VD RK +P D
Sbjct: 121 EMLEIIQGLITKGLAYEVDGDVYFAVDKFPQYGKLSGRSLEDMQAGARVDVDERKNHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK EPSW SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKAKPDEPSWKSPWGEGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + + YWMHN +T N +KMSKSLGNFFT+R+I + + LR +L+S HYR
Sbjct: 241 QSEGYLEGKPFAHYWMHNAFLTFNQQKMSKSLGNFFTVREILDHFSGEVLRFYLLSTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++ L A + + +++ AL+ +N +F A
Sbjct: 301 SPLDFDDENLRMAQKGLERLQTSIRLAAEALTKKGPVEIKLEMNEELVKASETAHRDFEA 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N++ F+ + +N L + P L K + E+ +L
Sbjct: 361 AMDDDFNSALAYASLFE-----LGKHINTLLQDYPYASA-----GLAKARETLLELAGVL 410
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G L+ + + + + E + + L+ R AR+ KD+ SD IR L G
Sbjct: 411 GF--------DLEHPESQEVAQDEKLTQVMEVLLSVRMKARQKKDWETSDFIRDQLKEIG 462
Query: 496 IALMDMGKETIW 507
IAL D + W
Sbjct: 463 IALEDTPQGARW 474
>gi|253988481|ref|YP_003039837.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
gi|253779931|emb|CAQ83092.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
Length = 461
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 287/493 (58%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI PG VGMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHPGIVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L++R E D L L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENHESCDDLTSRMLAEMYKDFDALNILRPDLEPRATRHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F+VE +YG LS Q L +AG RV V KRNP DF
Sbjct: 122 IELTESLIKRGHAYVADNGDVMFSVESDSDYGALSRQDLSQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGKGRPGWHIECSAMNGKQLGNHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLKYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ G A ++PA + F M
Sbjct: 302 LNYTEENLKQARTALERLYTALR------------GTDASVSPAGGEVFEA---RFIEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N L K + LS L + ++++ ILGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINCL-----KSEDLSAANGLAAV---LRKLAGILGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + Q+ D+ + + E LI++R ARKNKD++ +D R L G
Sbjct: 394 LEQDPEQFLHSGVQVDDEDIAKIE-------ALIKQRNDARKNKDWTLADSARDQLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IELEDGPQGTSWR 459
>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
Length = 461
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKGED--------MAAANGLAAELRKLAKVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R L
Sbjct: 394 LQQEPEQFLQSGAQADDGEVAEIE-------ALIKQRNDARKAKDWALADAARDRLNEMS 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|421808496|ref|ZP_16244343.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|410415644|gb|EKP67429.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
Length = 473
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + N EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVNGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSNIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|423399363|ref|ZP_17376561.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|423409861|ref|ZP_17387010.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
gi|401644463|gb|EJS62153.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|401652401|gb|EJS69958.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
Length = 465
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--MEKFQSAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYIK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|317047240|ref|YP_004114888.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316948857|gb|ADU68332.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 461
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 287/491 (58%), Gaps = 34/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI G++GMYVCG+T YDL H+GH R V+FD++ RYL ++ ++
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ +L+NR E D A L LPP +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHKDFAALGILPPDLEPRATRHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVGRLIERGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ H + + E+ F M
Sbjct: 302 LNYGEDNLNQARAALERLYTALR-----------HTDVSAVAAGGEE----FEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N L K + K +L LR++ EVL IL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRL-KTEDKTAADALAAKLRQL----AEVLGIL-Q 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P + + Q D + E LI+ R AR+ KD++++D R L GI
Sbjct: 396 QDPEQFLQSGAQANDDEVAEIE-------ALIKMRNDARQAKDWAQADVARDKLNALGIV 448
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 449 LEDGPQGTTWR 459
>gi|392373606|ref|YP_003205439.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
gi|258591299|emb|CBE67598.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
Length = 530
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/523 (40%), Positives = 297/523 (56%), Gaps = 37/523 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++ Q+KE F P VPG+V MY CG T YD +H+GHARAA++FD+++RYLE
Sbjct: 1 MALVVYNTLHQKKERFEPAVPGEVRMYACGPTVYDRAHIGHARAALTFDVVWRYLERRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V+YVRN+TDVDDKII+RA +LG++ SL + Y DM L PT +PR + H+
Sbjct: 61 KVSYVRNYTDVDDKIIQRAAELGQSRESLVEEQIEAYRRDMDALGLRTPTEEPRATRHIR 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I ++ AY V+GDV+F V +S +YG+LS + L+ +AG RV VD RKR+P D
Sbjct: 121 EMIEIIRTLMAKGVAYSVDGDVYFEVRRSSDYGKLSHRGLDELQAGARVEVDPRKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA++ GEP+W+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKASRPGEPAWESPWGPGRPGWHIECSAMSMKYLGETFDIHGGGADLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YW+HNG V EKMSKSLGN TIR++ R P A + FL+ HYR+
Sbjct: 241 QSECATGKPFARYWIHNGFVNIRAEKMSKSLGNILTIRELLGRISPCAFKLFLLGTHYRA 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-AAEDCINKLRDEFHA 375
P+ +S L SA+ A + L++ + +R++ I + E+
Sbjct: 301 PVEFSEDALISATAAAARFHTVLEEVQRFQDVQGSKADRSRMDSLPLSGQIREAEQEYTD 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI-------ESLRKIENEV 428
M DD NT L F + +N+ + + SL+ E+LR + + +
Sbjct: 361 AMDDDFNTPRALAALFN-----LTKGVNVALRDVDGAPEPSLVYGLSMAGETLRTLGSVL 415
Query: 429 -------KEVLRILGLLP------PGAYSEVLQQLKDKALKRAELTE-----------ED 464
+EV+ L + P G + VL+ D K E E E
Sbjct: 416 GGLFEGPREVVDRLIMTPSAGTSTSGTAASVLRITGDDYCKAREAVESAMASGHTPPTEA 475
Query: 465 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 507
+ ++ RA R KD++ +D IR LT G+ + D G W
Sbjct: 476 IRTIVAYRALCRDRKDWTTADAIRTWLTNLGVVVDDTGDGVRW 518
>gi|325578800|ref|ZP_08148847.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
gi|325159624|gb|EGC71756.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
Length = 482
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 287/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI GKVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 25 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 84
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 85 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 144
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV GDV F VE YG+LS Q L+ +AG R+ ++ K+NP DF
Sbjct: 145 IEIVEKLIARGHAYVANNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKNPMDF 204
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 205 VLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 264
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSL NFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 265 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLSNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 324
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 325 LNYSEENLNLAQGALERLYTALRGTDQSAVAF-----------GGENFVEAFREA----M 369
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + E + + E+ ILGL
Sbjct: 370 DDDFNTPNALSVLFEMA-----REINKLKTEDA--------EKANGLAARLCELAGILGL 416
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD++ +D R +LT G
Sbjct: 417 ---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMG 467
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 468 IVLEDGPNGTTWR 480
>gi|399889684|ref|ZP_10775561.1| cysteinyl-tRNA ligase [Clostridium arbusti SL206]
Length = 465
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 292/490 (59%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+M+++KE F P+ PG+V MYVCG T Y+ H+G+AR + FD + RY E+ +V
Sbjct: 1 MKIFNTMSRKKEEFVPVKPGEVKMYVCGPTVYNYFHIGNARTFIIFDTVRRYFEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++++NFTD+DD++I +A G L +R+ EY D L T PR ++ ++ I
Sbjct: 61 SFIQNFTDIDDRMISKAKQDGITIKELGDRFISEYYKDADGLNIERATANPRATEFIDDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ + +++ AY ++GDV+F+ EK YG+LSGQ LE +G R+ VD RK++P DFA
Sbjct: 121 INFVKDLVDKKFAYEIDGDVYFSTEKFEKYGKLSGQNLEELESGVRINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEP+W SPWG GRPGWHIECS M+ L DIH GG+DL+FPHHENEIAQS
Sbjct: 181 IWKKQKEGEPAWKSPWGFGRPGWHIECSCMAHKLLGDTIDIHAGGMDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ +YWMH+ ++ NN+KMSKSL NF T R E++ P +R ++SAHYR+ L
Sbjct: 241 ESRNGKKFANYWMHSAYLNINNQKMSKSLNNFLTARDALEKFDPEVIRFLMLSAHYRTQL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS LDS A+ +Y ++ + E L + + +N RD++ +M
Sbjct: 301 NYSPDLLDSDKSALERLYNSIDNLENLLGEVKFEKLKKEEKEYLNN-LNSYRDKYIEKMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F D K INS++N+ K+ Q L+LI L K
Sbjct: 360 DDFNTADAISVIF-DLSKDINSNINIESSKEIIQTALNLIRELGK--------------- 403
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P G +LQ++ K L ++++ +LIEER AR+ K+F+ SD+IR DL KGI L
Sbjct: 404 PLG----ILQKVTKKDL------DKEIEKLIEERQKAREEKNFALSDKIRDDLKAKGIVL 453
Query: 499 MDMGKETIWR 508
+D + W+
Sbjct: 454 LDTPQGVRWK 463
>gi|37527666|ref|NP_931010.1| cysteinyl-tRNA synthetase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|61216271|sp|Q7N0S5.1|SYC_PHOLL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|36787101|emb|CAE16176.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) (CysRS)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 461
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/495 (44%), Positives = 290/495 (58%), Gaps = 42/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI PGKVGMYVCG+T YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHPGKVGMYVCGITIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R E D L L P +PR + H+++I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENSESCDDLTGRMLAEMYKDFDALNILRPDLEPRATRHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I AYV + GDV F+VE +YG LS Q L +AG RV V KRNP DF
Sbjct: 122 IALTESLIKRGHAYVADNGDVMFSVESDQDYGLLSRQDLSQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGNHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ Y L+ G A + PA + F M
Sbjct: 302 LNYTEDNLKQARTALERFYTALR------------GTDASVPPAGGEIFEA---RFIDAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D ++ IN LK + +++ + E++++ ILGL
Sbjct: 347 NDDFNTPEAYSVLF-DMVREINR----LKSED--------MDAANGLAAELRKLAGILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRA-ELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTR 493
LQQ ++ L R + +E++ + LI++R ARKNKD+ +D R L
Sbjct: 394 ---------LQQQPEQFLHRGIQADDEEIAKIEALIKQRNDARKNKDWPLADSARNQLNE 444
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 445 MGIELEDGPQGTSWR 459
>gi|421782075|ref|ZP_16218534.1| cysteine--tRNA ligase [Serratia plymuthica A30]
gi|407755631|gb|EKF65755.1| cysteine--tRNA ligase [Serratia plymuthica A30]
Length = 461
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R L
Sbjct: 394 LQQEPEQFLQSGAQADDGEVAEIE-------ALIKQRNDARKAKDWALADAARDRLNEMN 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
Length = 461
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 282/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENSETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I D AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + +P AR F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDANATPKGGAEFEAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANGLAAELRKLAHVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q + + + E LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQSGAQTDNDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|187629791|sp|A7GK01.1|SYC_BACCN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 465
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLEH
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEEKKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEHKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ +++ R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIAERFIEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV++ ++ YG+LS Q +E+ R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYYRTKEFEGYGKLSHQAIEDLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLSFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKPFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y+ L+ + + +H N + + + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTTYRNLKHRIESSTDLTDH------NEKWLAEMKEFQSAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M DD NT++ +T + A N + L ++ + +IE+ N+++ + R
Sbjct: 355 EAAMDDDFNTANAITELYNLA----NHANQYLLEEHTSK---VVIEAYI---NQLEMLFR 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL+ + EL ++++ LI++R ARKN+DF+ +D+IR DL
Sbjct: 405 ILGLV----------------FTKEELLDKEIEALIQKRIEARKNRDFALADKIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|221134802|ref|ZP_03561105.1| cysteinyl-tRNA synthetase [Glaciecola sp. HTCC2999]
Length = 459
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 280/496 (56%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N++T++K F P+ P KVGMYVCG+T YDLSH+GHAR +SFD++ RYL H+ EV
Sbjct: 2 LHIFNTLTREKAPFVPLEPNKVGMYVCGITVYDLSHMGHARTYLSFDVMVRYLRHMGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L+ R D A L LPP +PRV+ HM +I
Sbjct: 62 KYVRNITDVDDKIIQRAIENNETMSQLTERTVAMMHEDFAALNLLPPDIEPRVTTHMAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I +++ AYV GDV F V +YG LS Q L+ ++G RVAV K +P DF
Sbjct: 122 IEVIEKLVAKGHAYVASSGDVLFDVSTFKDYGALSKQDLDQLQSGARVAVADGKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL FPHHENE+AQ
Sbjct: 182 VLWKKAKANEPSWSSPWGEGRPGWHIECSAMNHKHLGKHFDIHGGGSDLTFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V +NEKMSKSLGNFFT+R + E++H LR FL+SAHYRS
Sbjct: 242 SCCAFDTPYVNTWVHTGMVQVDNEKMSKSLGNFFTLRSVLEQHHKETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEV-ALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
L+YS L+ A + +Y L+D + + G AR F A
Sbjct: 302 LSYSQDNLEQAQSGLERLYTALRDVTPDSRTELGYGGYLAR---------------FEAA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT + F A LN K P + + + +VL LG
Sbjct: 347 MNDDFNTPIAFSVLFDCA-----KDLNKAKSTDPAEA------------SRLAQVLISLG 389
Query: 437 LLPPGAYSEVLQQLKDKAL----KRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+L L+D + A++ E V LI +R AR +KD+ +D R LT
Sbjct: 390 --------AILGCLQDDPVNFLQSDADIDGEAVAALIAQRNQARADKDWGAADAARDALT 441
Query: 493 RKGIALMDMGKETIWR 508
G+ + D T WR
Sbjct: 442 AMGVVIEDSATGTTWR 457
>gi|433447291|ref|ZP_20410888.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|431999955|gb|ELK20862.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 465
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/503 (40%), Positives = 294/503 (58%), Gaps = 51/503 (10%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++++YN++T++KE F P+ P KV MYVCG T Y+ H+G+AR A+ FD + RYL+
Sbjct: 1 MSIQVYNTLTRKKEPFIPLEPNKVKMYVCGPTVYNYIHIGNARPAIVFDTIRRYLQFRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+IR A +LGE+ +++ R+ + Y D+ L C PRV+++++
Sbjct: 61 EVQYVSNFTDVDDKLIRAARELGEDVPTIAERFIEAYFEDITALGCKKADVHPRVTENID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I Q+I AY V+GDV++ + +YG+LS Q ++ ++G R+ V +K +P D
Sbjct: 121 TIIQFIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSIDELKSGARIEVGEKKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YW+HNG++ +NEKMSKSLGNF + I ++ P LR F++S HYR
Sbjct: 241 QSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFILVHDIIKQVDPQVLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L+SA L+ + A + + H + N D I +LR+
Sbjct: 301 PINYSQPLLESARSG-------LERLKTAYANLK-HRLESSTNLTTNDEQWLAKIEELRN 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES------LRKIE 425
EF M DD NT++ + F+ A KQ + L+E ++K
Sbjct: 353 EFIREMDDDFNTANGIAVLFELA----------------KQANVYLMEKHTSQAVIQKFL 396
Query: 426 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 485
+ +++ +LGL +L++ EL +E++ LI++R ARKN+DF+ +D
Sbjct: 397 RQFEQLFDVLGL----------------SLQQDELLDEEIEALIQQRIEARKNRDFALAD 440
Query: 486 QIRADLTRKGIALMDMGKETIWR 508
+IR +L K I L D + T WR
Sbjct: 441 RIRDELKAKNIILEDTPQGTRWR 463
>gi|254724230|ref|ZP_05186015.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A1055]
Length = 465
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE FTP+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKS+GNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSIGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 467
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/492 (43%), Positives = 291/492 (59%), Gaps = 35/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE FTPI PG+V MYVCG+T YD HLGHAR V+FD++ RYL +V
Sbjct: 1 MQIYNTLTRRKETFTPIDPGRVRMYVCGMTVYDYCHLGHARVMVAFDVITRYLRARGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKI++RA + GE SL++R D L L P +PR + H+++I
Sbjct: 61 TYVRNITDIDDKILKRAEENGETIASLTDRMIDAMHEDEGRLGVLRPDAEPRATQHVDEI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY GDV++ V K +YG+L+ + ++ RAG RV V+ K +P DF
Sbjct: 121 VTMIQTLIDKGYAYAASNGDVYYRVRKFADYGKLNNRDPDDMRAGARVDVEELKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE W SPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEADWLSPWGPGRPGWHIECSAMSTCCLGETFDIHGGGPDLTFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+ WMH G V +EKMSKSLGNFFTIR++ E + P +R+ L+++HYRSP
Sbjct: 241 SEAATGKQYVNTWMHAGAVRVQHEKMSKSLGNFFTIREVLEHHDPEVVRYLLVASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NY+ L A ++ Y L VAL + G+ ++P+ F M
Sbjct: 301 INYAPDSLADARKSLERFYNALDG--VALEGVETPGE---VDPS-------FDRRFIEAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F + LN +K+ P+Q + E+K + +LGL
Sbjct: 349 DDDFNTAGAISVLFD-----LARELNRARKEAPEQAP--------ALAAELKRLGGVLGL 395
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + LK A L+E ++ I ERA A++ +DF+++D IR +L G
Sbjct: 396 LQQEPAVF------LKGGA-GELPLSEAEIEARISERAEAKQARDFARADAIRDELAALG 448
Query: 496 IALMDMGKETIW 507
I L D + T W
Sbjct: 449 IVLKDSREGTSW 460
>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Neptuniibacter caesariensis]
gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
Length = 461
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/492 (43%), Positives = 289/492 (58%), Gaps = 39/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T++K FTPI GK+ MYVCGVT YDL H+GHAR V+FD++ R++ +V
Sbjct: 2 LQIYNTLTKEKSPFTPIEEGKIKMYVCGVTVYDLCHIGHARVMVAFDVITRFMRSQGWDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + GE P L+ R D A L L PT +PR + H+ I
Sbjct: 62 DYVRNITDVDDKIIKRAAENGEEPHELTERMIAAMHEDEARLSVLRPTQEPRATAHIGDI 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AY GDV++ VEK +YG+L+ + ++ + G R+ V+ K +P DF
Sbjct: 122 ISLVETLIEKGFAYPAANGDVYYRVEKFADYGKLTNKNVDELKTGARIEVEEAKESPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GE SWDSPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKEGEVSWDSPWGKGRPGWHIECSAMSKCCLGNTFDIHGGGPDLPFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+ WMH G V N+EKMSKSLGNFFTIR + E+Y+ +R FL HYR+
Sbjct: 242 SEAANGCTYVNTWMHAGPVRVNSEKMSKSLGNFFTIRDVLEKYNAEVVRFFLARVHYRTY 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A + YQ L+ + P + N + F A M
Sbjct: 302 IDYSEDSLKEARVMLERFYQALRGVDAVEGPLE----------------NDFEERFIAAM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQLSLIESLRKIENEVKEVLRIL 435
+DD NT ++ F+ +N L K ++ + +L LRK+ +L
Sbjct: 346 NDDFNTPKAVSVMFE--------LVNELNKATREGASEAPALAAQLRKLGG-------ML 390
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL A E LQ ++ L+ E++ QLI +RA A+K K+F+++D+IR DL +G
Sbjct: 391 GLLQQNA-DEFLQGESEE----GGLSNEEIEQLIVDRAEAKKAKNFAEADKIRDDLASQG 445
Query: 496 IALMDMGKETIW 507
I L D + T W
Sbjct: 446 IILKDSREGTSW 457
>gi|445492789|ref|ZP_21460635.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444762993|gb|ELW87339.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
Length = 473
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ ++++EQ+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIEQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|421539054|ref|ZP_15985225.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
gi|402315166|gb|EJU50732.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
Length = 473
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 288/505 (57%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K + L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDVHLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
Length = 473
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 287/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGDLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K +L L+
Sbjct: 354 ---NDYTSRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDANLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 464
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/496 (44%), Positives = 290/496 (58%), Gaps = 41/496 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P PG+V MYVCG+T YD H+GHAR V FD++ R+L L
Sbjct: 3 SLRIYNTLARDKQVFVPRHPGEVRMYVCGITVYDYCHVGHARMMVVFDVVQRWLRALGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ D+ L P ++PR +D + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIGSLTSRFIAAMHEDLDALGVARPEHEPRATDFVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + N AY +GDV +AV K NYGRLSG+ L++ RAGERVA + K++P D
Sbjct: 123 MLGMIETLEANGYAYQASDGDVNYAVRKFANYGRLSGKSLDDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AK GEP SWDS +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKSAKPGEPADTSWDSKYGRGRPGWHIECSAMGCTLLGHHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A ++ V+YWMHNG V ++EKMSKSLGNFFTIR++ RY +R F++ H
Sbjct: 243 EIAQSEGATGETFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLARYDAEVMRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + LD A ++ +Y L+D +P AR F
Sbjct: 303 YRSPLNYSEVHLDDARASLTRLYTALKDVTPDAAPLDRDEPHAR--------------RF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD NT+ ++ F+ A + +N + +Q KQ L R+
Sbjct: 349 AAAMNDDFNTALAVSVLFELAGE-VNRTREPALARQLKQLGGLLGLLGRE---------- 397
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
P AY LQQ A L + I R AA++ K+++++D+IRA L
Sbjct: 398 ------PRAY---LQQASGAA--SGALEAGAIEAQIAARVAAKQAKNYAEADRIRAALLE 446
Query: 494 KGIALMDM-GKETIWR 508
G+AL D G T WR
Sbjct: 447 AGVALEDKPGGLTEWR 462
>gi|258404670|ref|YP_003197412.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257796897|gb|ACV67834.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 485
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/492 (41%), Positives = 284/492 (57%), Gaps = 13/492 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YNSMT+QKE F P G++ +YVCG+TAYD H+GHARAAV FD+L RY V
Sbjct: 1 MQLYNSMTRQKEEFIPQTSGEISLYVCGITAYDYCHIGHARAAVVFDVLVRYFRDQNFAV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+VRNFTDVDDKII+RA + ++ +Y Y DM L P ++P+ ++H++ +
Sbjct: 61 HFVRNFTDVDDKIIKRAAEEHLEADEVAQKYIAAYYEDMERLGVQPANFEPKATEHIQDM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I AY GDV+F V P+YG LSG+ L+ RAG R+A K +P DF
Sbjct: 121 IGLAENLIAKGHAYATASGDVYFRVRSLPSYGSLSGRELDTMRAGARIAPGEEKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK AK EPSW SPWG GRPGWH+ECSAMS +L DIHGGG DL FPHHENE AQ
Sbjct: 181 ALWKRAKPEEPSWPSPWGNGRPGWHLECSAMSERFLGLPLDIHGGGQDLAFPHHENERAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA +W+HNG V EKMSKSLGNF TIR I Y P LR+FL++ HYRSP
Sbjct: 241 SLAASGKELARFWVHNGFVQVEAEKMSKSLGNFITIRDILSYYLPEVLRYFLVTKHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+++ +D A + +YQT Q ALS + + + I+ L ++ M
Sbjct: 301 LDFNWEVMDEAEKGLRRLYQTRQHIAEALS--RSNWSKTELPSELSAEIDDLDAKWRQNM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DDLNT+ L F +N N + + + ++ + + L +I++ + + +LGL
Sbjct: 359 EDDLNTAGALGHVFT-----LNRLANRILEDKTWRKAEAGGKLLERIQSIFEHIGNVLGL 413
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
P A+ L L+ + KR + V QLI +R AR+ KDF+ +D +R L G
Sbjct: 414 FQQTPDAF---LDDLRTQKAKRKGIDTSAVAQLITKRQEARRAKDFTTADSVRQQLEEMG 470
Query: 496 IALMDMGKETIW 507
I + D + +W
Sbjct: 471 IEVQDTPQGPVW 482
>gi|392541321|ref|ZP_10288458.1| cysteinyl-tRNA synthetase [Pseudoalteromonas piscicida JCM 20779]
Length = 459
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/497 (43%), Positives = 288/497 (57%), Gaps = 48/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QK F P+ GKV MYVCG+T YD H+GHAR VSFD++ RYL +L +V
Sbjct: 2 LQIFNTLTRQKAPFKPLKEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV +GDV F V YG+LS Q LE +AG RV V K +P DF
Sbjct: 122 IEMIARLIEKGHAYVAKDGDVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEP+W SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPAWQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R++ + + +R+FLI+ HYRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ IY L+ E L + G N + F M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVE--LVEIELKG-------------NAYAERFETAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK---QQQLSLIESLRKIENEVKEVLRI 434
+DD NT L F+ ++ +N LK K + L+ ++ I
Sbjct: 347 NDDFNTPEALPVIFE-----LSKEVNRLKDSDAKAAGEHAFILV-----------KLAEI 390
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADL 491
LG + Q ++ + E +++V Q LIE+R +AR+NKD++ +D+ R L
Sbjct: 391 LG----------IAQQDPESFLQGEQDDDEVAQIEALIEKRRSARENKDWAAADEARDAL 440
Query: 492 TRKGIALMDMGKETIWR 508
T G+ L D +T WR
Sbjct: 441 TALGVVLEDSAGKTTWR 457
>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
Length = 460
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 287/494 (58%), Gaps = 41/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDAIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R E D L L P +PR + H+++I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNESCDDLTTRMLAEMHNDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV GDV F+++ +P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITETLIERGHAYVAANGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKQGEPSWESPWGTGRPGWHIECSAMNGKTLGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLGYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A ++ +Y +L+ + + P G AR A M
Sbjct: 302 LNYTEENLKQARTSLERLYTSLRGTDKSAQPAGGAGFEARFTEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + I + + E++++ ILGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKAED--------IVAANGLAAELRKLAGILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L+Q + L+ ++DV Q LI++R ARKNK+++ +D R L
Sbjct: 394 ---------LEQEPEHFLQGGAQVDDDVAQIEALIKQRNDARKNKEWALADAARNQLNEL 444
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 445 GIELEDGPQGTTWR 458
>gi|421562116|ref|ZP_16007952.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
gi|402335505|gb|EJU70770.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
Length = 473
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 290/505 (57%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ A + +N + N +
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------Q 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 392 LAGRLKALGGIIGLLQRDP-TEFLQ----GGVASDGLSNEEIEDLIARRKQARSDKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|47569824|ref|ZP_00240494.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
gi|47553517|gb|EAL11898.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
Length = 465
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE FTP+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + +L +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEDLLDEEIEALIQKRIEARKNRDFALSDQIRDDLKN 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|384131638|ref|YP_005514250.1| cysS [Acinetobacter baumannii 1656-2]
gi|385236958|ref|YP_005798297.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387124491|ref|YP_006290373.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407932282|ref|YP_006847925.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|417869475|ref|ZP_12514460.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|417872928|ref|ZP_12517811.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|417878946|ref|ZP_12523538.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|417881912|ref|ZP_12526221.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|421203711|ref|ZP_15660846.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|421533834|ref|ZP_15980114.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|421629211|ref|ZP_16069951.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|421687025|ref|ZP_16126761.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|421703081|ref|ZP_16142548.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|421706801|ref|ZP_16146204.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|421790903|ref|ZP_16227093.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|424052919|ref|ZP_17790451.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|424064410|ref|ZP_17801895.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|425755223|ref|ZP_18873045.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|445464068|ref|ZP_21449451.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|445481109|ref|ZP_21455771.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|187631665|sp|A3M419.2|SYC_ACIBT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558609|sp|B2HX34.1|SYC_ACIBC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|342230338|gb|EGT95178.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|342230714|gb|EGT95540.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|342232733|gb|EGT97504.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|342238444|gb|EGU02876.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|385878983|gb|AFI96078.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|398326755|gb|EJN42898.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|404566489|gb|EKA71635.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|404670997|gb|EKB38866.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|404673146|gb|EKB40945.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|407192917|gb|EKE64090.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|407193200|gb|EKE64368.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|407900863|gb|AFU37694.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|408702925|gb|EKL48332.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|409988287|gb|EKO44460.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|410404321|gb|EKP56389.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|425495265|gb|EKU61454.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|444770795|gb|ELW94937.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|444779964|gb|ELX03936.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
Length = 473
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|379012779|ref|YP_005270591.1| cysteinyl-tRNA synthetase [Acetobacterium woodii DSM 1030]
gi|375303568|gb|AFA49702.1| cysteinyl-tRNA synthetase CysS [Acetobacterium woodii DSM 1030]
Length = 465
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/495 (40%), Positives = 300/495 (60%), Gaps = 33/495 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++TQ+KE F PI GKV MY CG T Y+ H+G+AR + FD+L R+LE+ EV
Sbjct: 1 MKLYNTLTQKKETFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYTGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII R+++ +P +++ +Y QEY D L + P+VS+++ +I
Sbjct: 61 TFIQNFTDVDDKIINRSHEENISPEAVAEKYIQEYFADADALGIKRASVHPKVSENITEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI + AY V G+V++ VE +YG+LS Q +++ R+G R+ V+ K +P DFA
Sbjct: 121 IEMIKTLEAKGLAYNVSGNVYYRVEAFKDYGKLSKQSIDDLRSGARIEVNDEKHSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP W SPWG GRPGWHIECSAMS +L + DIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKKKKDGEPYWPSPWGDGRPGWHIECSAMSKKHLGATIDIHGGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+C + +YW+HNG++ +N+KMSKS GNFFT+R I +++ +R FL+ AHYRSP+
Sbjct: 241 EGSCGKTFANYWVHNGYINIDNQKMSKSKGNFFTVRDIAKKFDLEVVRMFLLMAHYRSPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHAR 376
N+S + L A+ A+ +Y E L +P + +T + +++ + +F A
Sbjct: 301 NFSEVLLQQAATALERLYTAKFQMEFLLEKAPLEAATETEM---TWMNTLDQYKHDFIAA 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD+NT+ + F+ ++ +NS+L+ K ++ +N E+ +LG
Sbjct: 358 MDDDINTADAIAVIFE-LVRDLNSNLDANSTKA----------AIMAGQNIFSELTTVLG 406
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKG 495
L A+K E +D ++ LI +R AARK KDF ++D IR +L KG
Sbjct: 407 L----------------AVKAKETNLDDAVEDLIAQRQAARKAKDFKRADAIRDELLAKG 450
Query: 496 IALMDMGKETIWRPC 510
I L D + W+
Sbjct: 451 IVLEDTREGVKWKKA 465
>gi|160881448|ref|YP_001560416.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
gi|187629805|sp|A9KSM5.1|SYC_CLOPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160430114|gb|ABX43677.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
Length = 470
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/494 (40%), Positives = 285/494 (57%), Gaps = 30/494 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+ KE F P+ GKV MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKIYNTLTKAKEEFIPLQEGKVSMYVCGPTVYNYIHIGNARPVVVFDTVRRYLEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V NFTDVDDKII++AN+ G + +S RY +EYL D L LP T +P+ ++ ++ +
Sbjct: 61 NFVSNFTDVDDKIIKKANEEGVSAHEISERYIKEYLKDTEALNVLPVTTRPKATEEIDGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DMI ++I AY G V+F YG+LS + +++ AG R+AV K +P DF
Sbjct: 121 IDMIEELIEKGHAYEKNGTVYFKTRSFKQYGKLSKKNIDDLEAGARIAVADEKDDPMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP+W +PW GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQ+
Sbjct: 181 LWKPKKVGEPAWSAPWCDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLIFPHHENEIAQT 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
YWMHNG + +N+KMSKS GNFFT+R+I Y P LR FL+S +YRSP+
Sbjct: 241 ECCTGKEFAKYWMHNGFLNVDNKKMSKSEGNFFTVREIFAEYAPAVLRFFLLSVNYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK----LRDEFH 374
N+S ++S+ + + I ++ E G+ + +E + K L +F
Sbjct: 301 NFSRDIIESSKNGLERIQTAVEQLHFLAKVKAEKGELSTELTESESTLLKEFDALIKKFE 360
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ ++ F+ M+K S +E ++K+ + + I
Sbjct: 361 DAMDDDFNTADAISSIFE-----------MVKLSNTYVTVESSVEMIQKVLSNITTFCDI 409
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LGL + K+AE+ +E++ QLI +R +ARK KDF+KSD+IR L K
Sbjct: 410 LGL---------------ETEKKAEILDEEIEQLIADRQSARKAKDFAKSDEIRNLLLEK 454
Query: 495 GIALMDMGKETIWR 508
GI L D + W+
Sbjct: 455 GIILEDTREGVKWK 468
>gi|409202160|ref|ZP_11230363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas flavipulchra JG1]
Length = 459
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/497 (43%), Positives = 287/497 (57%), Gaps = 48/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T+QK F P+ GKV MYVCG+T YD H+GHAR VSFD++ RYL +L +V
Sbjct: 2 LQIFNTLTRQKAPFKPLKEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENKESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV +GDV F V YG+LS Q LE +AG RV V K +P DF
Sbjct: 122 IEMIVRLIEKGHAYVAKDGDVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEP+W SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPAWQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R++ + + +R+FLI+ HYRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ IY L+ E+ + + R F M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVELVEVELKGNAYVER---------------FETAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK---QQQLSLIESLRKIENEVKEVLRI 434
+DD NT L F+ ++ +N LK K + L+ ++ EVL I
Sbjct: 347 NDDFNTPEALPVIFE-----LSKEVNRLKDSDAKAAGEHAFILV--------KLAEVLGI 393
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADL 491
P ++ + E +++V Q LIE+R +AR+NKD++ +D+ R L
Sbjct: 394 AQQDP-------------ESFLQGEQDDDEVAQIEALIEKRRSARENKDWAAADEARDAL 440
Query: 492 TRKGIALMDMGKETIWR 508
T G+ L D +T WR
Sbjct: 441 TALGVVLEDSAGKTTWR 457
>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 473
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 301/491 (61%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ D ADL C+ P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAADLGCVAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + +Q+ ++ + + + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFK-------AYQQVYGQKTVDALEQSFVER----FNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q + L +LR++ N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQAMVLYSTLRQLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ D+ LI++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDEFLKSDIGQDALA---LSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|431792448|ref|YP_007219353.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782674|gb|AGA67957.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 477
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/501 (41%), Positives = 289/501 (57%), Gaps = 37/501 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+++N+M+ QKE F P GKV MY CG T Y+ H+G+ R V FD++ RYL +
Sbjct: 1 MPLRLFNTMSHQKEEFKPREKGKVAMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLMYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDKII R N+ G +PL L+ +Y +EY D L + T P+ +DH+
Sbjct: 61 DVTFVQNFTDIDDKIINRGNEEGIDPLELAQKYIEEYFKDAKALNLMTATIHPKATDHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + + AY VEGDV+FAV+K P+YG+LSG+ E+ +AG RV V+ RK NP D
Sbjct: 121 EMIEIIKGLEESGLAYAVEGDVYFAVDKLPDYGKLSGRNFEDMQAGARVEVEERKHNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP W+SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKSAKPGEPFWESPWGKGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS + YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYR
Sbjct: 241 QSEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEHFSGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------ 369
SPL++ L A + + +++ + AL HG+ PA E KL
Sbjct: 301 SPLDFDDENLQMAQKGLERLQTSIRLADEALG---RHGE----KPADEANDQKLIAAAEE 353
Query: 370 -RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
+ EF + M DD N++ F+ K IN+ + L+K +
Sbjct: 354 AQREFESAMDDDFNSALAYASLFELG-KVINAHVQAYPYGSA---------GLQKARATL 403
Query: 429 KEVLRILG--LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 486
E+ +LG L P +E + D+ + L+E RA ARK KD+ SD
Sbjct: 404 WELADVLGFDLAHPANSAEAGNEKLDQVMDL----------LLEVRAIARKKKDWEMSDL 453
Query: 487 IRADLTRKGIALMDMGKETIW 507
IR L GI L D + W
Sbjct: 454 IRDRLKDLGIVLEDTPQGARW 474
>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 465
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/498 (44%), Positives = 293/498 (58%), Gaps = 44/498 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K+ F P+ G V MYVCG+T YD H+GHAR V FD++ R+L L E
Sbjct: 3 SLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ D L P +PR +D + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + N AY +GDV +AV K YG+LSG+ LE+ RAGERVA + K +P D
Sbjct: 123 MLGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK +KAGEP+ WDS +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y +R F+ AH
Sbjct: 243 EIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + +D A +A+ +Y L D ++P + AA D F
Sbjct: 303 YRSPLNYSDVHIDDARNALGRLYTALTD----VAP----------DGAALDWNEAHAQRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD NT ++ F+ L + + + +L LR +
Sbjct: 349 QAAMNDDFNTPVAVSVLFE------------LATEVNRTRDPALARQLRSLGA------- 389
Query: 434 ILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P AY LQQ A++ A L + I ERAAA++ KD++ +D+IRA+L
Sbjct: 390 VLGLLGREPRAY---LQQAAGAAVEGA-LEPAAIEAKIAERAAAKQAKDYAAADRIRAEL 445
Query: 492 TRKGIALMDM-GKETIWR 508
G+AL D G T WR
Sbjct: 446 LEAGVALEDKPGGLTEWR 463
>gi|399545485|ref|YP_006558793.1| cysteinyl-tRNA synthetase [Marinobacter sp. BSs20148]
gi|399160817|gb|AFP31380.1| Cysteinyl-tRNA synthetase [Marinobacter sp. BSs20148]
Length = 480
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/495 (42%), Positives = 289/495 (58%), Gaps = 33/495 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++IYN+++Q+KE F PI PGKVG+YVCG+T YD HLGHAR V+FD++ RYL H
Sbjct: 14 FVIRIYNTLSQKKEQFKPIEPGKVGLYVCGMTVYDYCHLGHARILVAFDVITRYLRHSGF 73
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YVRN TD+DDKI+RRA + GE L+ R D A L L P +PR + +
Sbjct: 74 DVNYVRNITDIDDKILRRAAENGEVYTDLTERMIAAMHEDEARLGVLLPNAEPRATAFIS 133
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I D AY + GDV+F+V +YG+LS ++LE+ AG RV V+ KR+PA
Sbjct: 134 DMIAMIKTLIAGDHAYAADNGDVYFSVSSFADYGKLSRKKLEDLLAGARVDVEQAKRSPA 193
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKAAK E W SPWG GRPGWHIECSAM+ H L FD+HGGG DL+FPHHENEI
Sbjct: 194 DFALWKAAKPDEVFWPSPWGNGRPGWHIECSAMANHCLGDTFDLHGGGPDLLFPHHENEI 253
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + V+ WMH G + N EKMSKSLGNFFTIR+I E Y +R+FL+S+HYR
Sbjct: 254 AQSECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMETYPAEVVRYFLVSSHYR 313
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE--F 373
S ++YS L + ++ +Y L+ + P A D + + + F
Sbjct: 314 SQVDYSEDNLIESGRSLTKLYNALRG----------------VTPLASDAVARTSHDTLF 357
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
RM DD N + + L + +N ++ +Q + L ++ +
Sbjct: 358 DKRMDDDFNCAGAMA-----ILHALAGEMNQQRRDGDEQAAAASATVLVRLGS------- 405
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGLL E+ Q + + EL+ E + +I+ RA ARK +DF+ +DQIR +L
Sbjct: 406 ILGLLQQD--PELFFQSDSGSGEGNELSAEQIETMIQSRADARKTRDFAGADQIRDELLT 463
Query: 494 KGIALMDMGKETIWR 508
+ + L D + T WR
Sbjct: 464 RRVILDDSREGTSWR 478
>gi|384184174|ref|YP_005570070.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410672461|ref|YP_006924832.1| cysteine--tRNA ligase CysS [Bacillus thuringiensis Bt407]
gi|452196467|ref|YP_007476548.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326937883|gb|AEA13779.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409171590|gb|AFV15895.1| cysteine--tRNA ligase CysS [Bacillus thuringiensis Bt407]
gi|452101860|gb|AGF98799.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 465
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 298/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE FTP+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 473
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/495 (42%), Positives = 279/495 (56%), Gaps = 50/495 (10%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L+ YNS+T+QKE F P PGK+GMYVCG+T YD H+GHAR V FD + R+L
Sbjct: 23 ALQFYNSLTRQKEAFIPREPGKIGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRASGYA 82
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
+ YVRN TD+DDKII RA++ GE +L+ R+ D A L C P +PR + +
Sbjct: 83 LKYVRNITDIDDKIIARAHENGEPIDALTARFITAMHEDEAALGCQRPDVEPRATAAVSG 142
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +++ +I AY + GDV++AV P YG+L+ + L++ RAGER+AV+ K++P D
Sbjct: 143 MIELVQTLIAKGHAYAADNGDVYYAVRSFPAYGKLANRSLDDLRAGERIAVNEAKKDPLD 202
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEP+WDSPWG GRPGWHIECS M A L FDIHGGG+DL FPHHE EIA
Sbjct: 203 FVLWKAAKPGEPAWDSPWGKGRPGWHIECSVMGAETLGEHFDIHGGGMDLKFPHHECEIA 262
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AC +V+YW+HNG V +NEKMSKSLGNFFT+R + ++Y LR F++S+HYR
Sbjct: 263 QSEGACGHPHVNYWIHNGFVQIDNEKMSKSLGNFFTVRDVLKKYDGETLRAFILSSHYRG 322
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNYS LD A A+ +Y L PA F
Sbjct: 323 PLNYSDAALDEAKKALTRLYSALDKA-----------------PADGAMDADAVAAFDEA 365
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT F D + +NS + +L +L+ + LG
Sbjct: 366 MNDDFNTPKAFAVLF-DLARRLNSG------------ETALAATLKTLSGR-------LG 405
Query: 437 LLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
L LQQ LK L+E D+L I RA A+ KD++++D IRA+L
Sbjct: 406 L---------LQQNPADWLKGENSGSLSEADILARIHARAEAKAAKDYARADAIRAELAA 456
Query: 494 KGIALMDMGKETIWR 508
+GI + D WR
Sbjct: 457 QGIIIKDTAGGVEWR 471
>gi|152980026|ref|YP_001353798.1| cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|166200150|sp|A6SZV1.1|SYC_JANMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151280103|gb|ABR88513.1| Cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 464
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/498 (44%), Positives = 293/498 (58%), Gaps = 45/498 (9%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
LKIYN++ ++K+ FTPI PGKV MYVCG+T YD H+GHAR V FDL+ R+L E
Sbjct: 3 ALKIYNTLAREKQPFTPIEPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
V YVRN TD+DDKII+RA + GE+ +L+ R+ D A L P ++PR ++++ Q
Sbjct: 63 VNYVRNITDIDDKIIKRAAENGESISALTQRFIDAMDEDAAALGVQKPDHEPRATNYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +I + N AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P D
Sbjct: 123 MLGLIEALERNGLAYKSSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK++K EP W S WG GRPGWHIECSAM+ L +FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKSSKEAEPDEVKWASKWGSGRPGWHIECSAMACELLGQQFDIHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTIR++ +Y +R F++ AH
Sbjct: 243 EIAQSEGASQHTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLAKYDSEVVRFFILRAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRS LNYS LD A +A+ +Y L+ ++P Q AA D F
Sbjct: 303 YRSQLNYSDAHLDDARNALTRMYTALK----GVAPDQ----------AALDMTEAHALRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F+ + + +N K +Q + L
Sbjct: 349 AEAMNDDFNTPLAVAVLFE-----LANEINKTKSPALARQLVGLAG-------------- 389
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEED--VLQLIEERAAARKNKDFSKSDQIRADL 491
I+GLL A QQ L E E + V++ IE R A+K K+F+++D+IRA+L
Sbjct: 390 IVGLLQRPA-----QQFLHAGLANGEDGEMETFVVEQIEARVNAKKAKNFAEADRIRAEL 444
Query: 492 TRKGIALMDM-GKETIWR 508
KGI L D G T WR
Sbjct: 445 LEKGIILEDKPGGLTEWR 462
>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
gi|123084029|sp|Q1QVV6.1|SYC_CHRSD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
Length = 461
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/490 (42%), Positives = 282/490 (57%), Gaps = 35/490 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE FTP+ G+V MYVCG+T YD H+GHAR V+FD++ RYL EV
Sbjct: 1 MQIYNTLTRRKETFTPLDAGRVRMYVCGITVYDYCHIGHARVMVAFDMITRYLRWRGFEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI++RA + E +L+ R D L L P +PR + H++ I
Sbjct: 61 DYVRNITDIDDKILKRAEENDEPIAALTERMIAAMHEDEGRLGVLRPDREPRATAHVDDI 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I+ AY GDV++ V + YG+LS + L++ RAG RV V++ K +P DF
Sbjct: 121 VAMVQRLIDKGYAYPAANGDVYYRVRRFEGYGKLSNRDLDDMRAGSRVEVETAKEDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK GE SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQ
Sbjct: 181 VLWKAAKPGEASWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLVFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+ WMH G V + EKMSKSLGNFFTIR++ E + P +R+ L+++HYRSP
Sbjct: 241 SEAATGRPYVNTWMHAGAVRVDQEKMSKSLGNFFTIREVLEAHAPEVVRYLLLASHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NY+ L A ++ Y LQ + P A + R+ F A M
Sbjct: 301 INYAPDALSDARRSLERFYNALQG----------------VAPVAGEVAAGYRERFIAAM 344
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ L F + LN K++ P +E+KE+ +LGL
Sbjct: 345 DDDFNTAEALAVLFD-----LARELNRAKQEAPAHAPAL--------AHELKELGGVLGL 391
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + R ++EED+ IE RA A+K KDF+ +D IR +L GI
Sbjct: 392 -----FGQDPEGFLQAGAGRLPMSEEDIEARIEARAQAKKAKDFATADGIRDELAALGIV 446
Query: 498 LMDMGKETIW 507
L D T W
Sbjct: 447 LKDGRDGTTW 456
>gi|404379151|ref|ZP_10984218.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
gi|294483496|gb|EFG31181.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
Length = 475
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/506 (42%), Positives = 283/506 (55%), Gaps = 52/506 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LYLYNTLTRQKERFEPIDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN GE L+ R+ Q D L L P +P+ ++H+ Q+
Sbjct: 62 TYVRNITDIDDKIIARANQNGETIQQLTERFIQAMNEDSQALGVLRPDIEPKATEHIAQM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI ++I N AY E GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 IQMIEKLIENGKAYPAENGDVYYAVREFDAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSW SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPSWASPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ------------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
SC A C DS+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y
Sbjct: 242 SCGANGGLCGHNKPVSGSLKKIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQ 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A +++ +Y TL + + +G
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKNSLTRLYNTLNNVKPIEFKLDSNGNN------ 355
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
N +F M+DD T+ ++ F+ + + K L L
Sbjct: 356 -----NDYTHKFFNAMNDDFGTAEAVSVLFE------------IANEANKNDSAELSGCL 398
Query: 422 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ + +LGLL +Q L+ +++ +LI +R AR+ K++
Sbjct: 399 KTLGG-------VLGLLQDNP-----EQFLQGGNNVDGLSADEINKLISQRKIARETKNW 446
Query: 482 SKSDQIRADLTRKGIALMDMGKETIW 507
++SD+IR L I + D T W
Sbjct: 447 AESDRIRDILAEHKIQVKDSADGTTW 472
>gi|421560018|ref|ZP_16005883.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
gi|402334103|gb|EJU69397.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
Length = 473
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/505 (43%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|271501481|ref|YP_003334507.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
gi|270345036|gb|ACZ77801.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
Length = 461
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/495 (43%), Positives = 284/495 (57%), Gaps = 42/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKIIRRA + GE L+NR E D L L P +PR + ++ +I
Sbjct: 62 KYVRNITDIDDKIIRRATENGETIEQLTNRMIDEMHTDFRALNILSPDEEPRATHYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F+V+ +P YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y +R+FLIS HYRS
Sbjct: 242 STCAHGGDYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLSHYDAETIRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHA 375
LNY+ L A ++ +Y L+ + ++ PAA E ++ RD
Sbjct: 302 LNYTEENLKQARASLERLYTALRGTDASV-------------PAAGGEAFEHRFRDA--- 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT + F A +N LK +++ +L
Sbjct: 346 -MDDDFNTPEAYSVLFDMA-----REVNRLKADDAAAASGLASAL--------RQLAGVL 391
Query: 436 GLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GLL P + + Q D ++ E LI++R AR++KD++ +D R LT
Sbjct: 392 GLLEHDPELFLQSGAQADDSEVQEIE-------ALIKQRNDARQSKDWALADAARNRLTE 444
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 445 MGIVLEDGPQGTTWR 459
>gi|423439732|ref|ZP_17416638.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|423450111|ref|ZP_17426989.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|423467989|ref|ZP_17444757.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|423537389|ref|ZP_17513807.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|423543117|ref|ZP_17519505.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|423626968|ref|ZP_17602743.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|401126734|gb|EJQ34468.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|401166817|gb|EJQ74117.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|401250163|gb|EJR56467.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|402411856|gb|EJV44219.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|402421913|gb|EJV54157.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|402459095|gb|EJV90833.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
Length = 465
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 295/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEKFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 EVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H N + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|343496600|ref|ZP_08734695.1| cysteinyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
gi|342821044|gb|EGU55843.1| cysteinyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
Length = 461
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 293/493 (59%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+NS+T+QKE F PI GKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIFNSLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + +++I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ +I AYV + GDV F V+K YG+LS Q L+ +AG RV V+ KR+P DF
Sbjct: 122 IDLVETLIERGFAYVADNGDVMFEVKKYDEYGKLSRQDLDQLQAGARVDVELAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ +++ SP E+ + + F M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLSASP-----------AGGEEYVTR----FTEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D + +N + K +Q S + +L ++E+ ++G+
Sbjct: 347 NDDFNTPEAYSVLF-DMAREVN------RIKGENLEQASALGAL------LRELADVIGI 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ LK A + E + LI+ R +R KD++ +D R L G
Sbjct: 394 LHQDPEAF------LKGGAADNDDEVAE-IEALIKLRNDSRAAKDWANADMARDKLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IELEDGPEGTTWR 459
>gi|329121962|ref|ZP_08250574.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
gi|327467260|gb|EGF12763.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
Length = 481
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/492 (41%), Positives = 289/492 (58%), Gaps = 20/492 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++K++F PI GKV +YVCGVT Y+ H+G+AR AV++D++ RYLE++ V
Sbjct: 4 IKVYNTLKREKQIFKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGYHV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTDVDDKII +AN + ++S RY Y M L P VS HME I
Sbjct: 64 DFIQNFTDVDDKIINKANAEKSDWKTVSTRYIDAYFKVMDALHIRRADIYPYVSKHMEDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DM+ +I AYV+ DV++ + +Y +LSG+++E+ AG RV V++ KRNP DFA
Sbjct: 124 IDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVNTAKRNPGDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECS MS HYL + FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRSPL
Sbjct: 244 EGATGQKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSPL 303
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHAR 376
++S +L+ A + L+D + ++ N + + + +EF
Sbjct: 304 DFSDERLEEAEKNM----SKLKDVIARIKEMEKEDGKVETNESVSLKKAAARTIEEFRQA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT + TG D +K IN N + +++ ++IE+ + K +L ILG
Sbjct: 360 MNDDFNTG-LATGVLFDFVKDINIYYNAVNSGVAIEKE-AVIEA----KETFKTILDILG 413
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+L SE Q L E ++ R ARK K + +D+IR L GI
Sbjct: 414 ILE----SEWNTQESYAGSDYDALME----MILSVRETARKEKQYKLADEIRDKLAELGI 465
Query: 497 ALMDMGKETIWR 508
+ D W+
Sbjct: 466 IVEDSATGARWK 477
>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
Length = 466
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 290/490 (59%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N+MT+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ L +R+ EY D L T PR ++ M++I
Sbjct: 61 NFIQNFTDIDDKMIKKANEENVTVKELGDRFINEYYKDADGLNIKRATVNPRATEFMDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +I+ AY V+GDV+F+ +K YG+LSGQ L++ +AG R+ VD RK++P DFA
Sbjct: 121 ISFVKDLIDKGYAYEVDGDVYFSTKKFAEYGKLSGQNLDDLQAGARITVDERKQDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEPSW+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 181 IWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +YWMH+ ++ NN+KMSKSL NFFT R+I ERY +R F++SAHYR+PL
Sbjct: 241 EARNGKDFANYWMHSAYLNINNKKMSKSLNNFFTTREILERYDAEVIRLFMLSAHYRTPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+SA + +Y ++ + E L + T + +N ++++ +M
Sbjct: 301 NFSDELLESAKASNERLYNSIGNLERLLDEVKIEEMTG-VEKEYIKVLNSYKEKYIEKMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ + F D +K IN+ +N K+ L LI +E+ LG+L
Sbjct: 360 DDFNTADAIAVIF-DLIKEINTHVNTDSSKELVNYSLELI----------RELGMPLGIL 408
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
++ +++ LIE+R ARK++D++ +D+IR DL +GI L
Sbjct: 409 QKSTIVDLNAEIE---------------GLIEQRQKARKDRDWALADKIRDDLKARGIVL 453
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 454 EDTAQGVRWK 463
>gi|410616834|ref|ZP_11327819.1| cysteinyl-tRNA synthetase [Glaciecola polaris LMG 21857]
gi|410163675|dbj|GAC31957.1| cysteinyl-tRNA synthetase [Glaciecola polaris LMG 21857]
Length = 464
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 288/493 (58%), Gaps = 35/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T+QKELFTP+ KVG+YVCG+T YDLSH+GHAR +SFDL+ R+L H EV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRFLRHKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAND E L+ R D A + LPP +PRV+ HM +I
Sbjct: 62 NYVRNITDIDDKIIQRANDNNETTSELTARTIAMMHEDFAAINLLPPDIEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I N AY + GDV F V +YG+LS Q LE G RV VD+ K +P DF
Sbjct: 122 IAIIERLIANGHAYQAKSGDVLFDVSSYRDYGKLSKQDLEQLNMGSRVDVDNDKDDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+ K GEPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKSVKPGEPSWASPWGKGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G V ++EKMSKSLGNFFT+R + +++ LR+FL+SAHYRS
Sbjct: 242 SCCAYNTPYVNYWVHTGMVQVDSEKMSKSLGNFFTLRDVLKQHDSETLRYFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS + A A+ +Y L+D VA + +++ + D + + F M
Sbjct: 302 LSYSEGNITQARSALERLYTALRDV-VA---------SDKVDMQSGDYLVR----FDKAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D + IN + K + S E + + + ++LG+
Sbjct: 348 DDDFNTPEAMAVLF-DLARGIN---------KAKTEGESGAERASNLAGILLNLGQVLGI 397
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P Y + +Q D++ + V LI+ R AR KD+ +D R L
Sbjct: 398 LQRSPNDYLQGDEQGGDESAQ--------VEALIKARNDARSAKDWPAADAARDALNALN 449
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 450 IVLEDGPNGTTWR 462
>gi|417568294|ref|ZP_12219157.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417578880|ref|ZP_12229713.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|395554589|gb|EJG20591.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|395568018|gb|EJG28692.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
Length = 477
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 10 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 69
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 70 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 129
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 130 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 189
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 190 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 249
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 250 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 309
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 310 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 359 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 406
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 407 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 463
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 464 LEDTRQGTVWR 474
>gi|421694240|ref|ZP_16133865.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404568242|gb|EKA73346.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
Length = 473
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 297/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|421566414|ref|ZP_16012164.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
gi|402340327|gb|EJU75529.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
Length = 473
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 286/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K + L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDVHLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD IR L I L D T WR
Sbjct: 447 SDHIRDLLNEHKIILEDNAGGTTWR 471
>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
Length = 473
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 286/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKV 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + + L+ A+ L+ E++ LI +R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIAQRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRNLLNEHKIILEDNADGTTWR 471
>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|109894895|sp|Q47HK6.1|SYC_DECAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
Length = 456
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/493 (45%), Positives = 297/493 (60%), Gaps = 43/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+ ++K++FTPI P KV MYVCG+T YD HLGHAR V FD++YR+L+ +V
Sbjct: 2 LKIYNSLKREKQVFTPIEPNKVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE L+NR+ D L P Y+PR ++++ ++
Sbjct: 62 TYVRNITDIDDKIIKRAIENGETIQQLTNRFIAFMHEDADALGVQRPDYEPRATEYVPEM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+I ++ N AY +GDV +AV K P YG+LSG+ L++ RAGERV VDS K++P DF
Sbjct: 122 LDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSGKSLDDLRAGERVEVDSAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP+W SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGGQDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMHNG V +NEKMSKSLGNFFTIR + E++ +R F++ AHYRSP
Sbjct: 242 SEGANCCNFVNYWMHNGFVRVDNEKMSKSLGNFFTIRTVLEQFDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ +Y L+D + PAA D +EF R
Sbjct: 302 LNYSDAHLDDARRSLDSLYFALRD----------------VPPAAADI--DWSNEFAGRF 343
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+ LN GA + L L + +Q+ L L+ + ++GL
Sbjct: 344 AAALNEDFDSHGAI--------AVLFELAAEVNRQKSAGLSCLLKGLGG-------VIGL 388
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P AY + L E V Q+I +RAAA+K K+F+++D+IR +L G
Sbjct: 389 LEREPSAYLQ-------GGAGVGGLDEAAVGQMIVDRAAAKKAKNFAEADRIRDELKAAG 441
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 442 IILDDSPQGTTWR 454
>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|424903636|ref|ZP_18327149.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|390931509|gb|EIP88910.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 465
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 297/496 (59%), Gaps = 40/496 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P PG+V MYVCG+T YD H+GHAR V FD++ R+L
Sbjct: 3 SLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDVVQRWLRAAGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ + VD L P +PR +D + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIQSLTSRFTRAMNVDFDALGVERPDIEPRATDFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV ++V K NYG+LSG+ LE+ RAGERVA + K +P D
Sbjct: 123 MLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AK +P SW+S +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRAKPQDPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR++ E++ +R F++ H
Sbjct: 243 EIAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + LD A ++ +Y L+D ++P AR F
Sbjct: 303 YRSPLNYSDVHLDDARASLTRLYTALKDATPDVAPLDWSEAHAR--------------RF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD NT+ + F+ + + +N + ++P +L L+++ VL
Sbjct: 349 AAAMNDDFNTAVAVAVLFE-----LATEVN--RTREP-----ALARQLKRLAG----VLG 392
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LG P E LQQ A + L E++ I R AA++ K+++++D+IRA+L
Sbjct: 393 LLGREP----REFLQQAA-GAARAGALEPEEIEAKIAARVAAKQAKNYAEADRIRAELLE 447
Query: 494 KGIALMDM-GKETIWR 508
GIAL D G T WR
Sbjct: 448 AGIALEDKPGGSTEWR 463
>gi|118602151|ref|YP_903366.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567090|gb|ABL01895.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 462
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/492 (43%), Positives = 294/492 (59%), Gaps = 35/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE+F PI KVG+YVCG+T YD H+GHAR V FD++ R+L V
Sbjct: 2 LKIYNTLSKQKEVFRPINADKVGIYVCGMTVYDYCHMGHARILVIFDVIIRHLRRYFPNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ +L+NR+ D L LPP +PR ++ M+QI
Sbjct: 62 EYVRNITDIDDKIIKRAIENKEDIYALTNRFIDAMHEDERALGVLPPDVEPRATNAMKQI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY GDV+++V NYG+LS + ++ AG R+ ++S K+NP DF
Sbjct: 122 FYMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKLSRKNIDKLEAGARIEIESAKKNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAMS H+L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGQGRPGWHIECSAMSTHHLGNHFDIHGGGMDLSFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G V ++EKMSKSL NFFTIR I E Y+ LR+F++S+HYRSP
Sbjct: 242 SEGANNCTFVNTWMHIGFVNIDDEKMSKSLNNFFTIRSILESYNCETLRYFIMSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LN+S L+ A ++ +Y ++ + + T ++ + + F+ +
Sbjct: 302 LNFSDDNLNKAKSSLSRLYTAIRGLNTSSTV------TEKVPMYFDYSV-----RFNEAL 350
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+D NT L+ F+ A K +N L++K+ Q +L + L+K+
Sbjct: 351 DNDFNTPIALSILFELA-KTVN-----LQRKKDVDQANALAQLLKKL------------- 391
Query: 438 LPPGAYSEVLQQLKDKALKRA-ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
G Y +LQ DK LK+ L+ +V I R AR +K+F+ SDQIR L GI
Sbjct: 392 ---GDYIGILQMDADKFLKQGISLSNSEVDVKITSRNEARADKNFALSDQIRDKLAELGI 448
Query: 497 ALMDMGKETIWR 508
L D +T WR
Sbjct: 449 VLEDNANDTTWR 460
>gi|423381863|ref|ZP_17359146.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|423543577|ref|ZP_17519935.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401187742|gb|EJQ94814.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401628489|gb|EJS46330.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
Length = 465
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 295/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEKFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 EVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H N + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAKEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|242240078|ref|YP_002988259.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
gi|242132135|gb|ACS86437.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
Length = 461
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 281/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDMVSRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L++R E D A L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETIAQLTDRMIAEMHADFASLNILSPDEEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV E GDV F+V+ +P YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IELVEKLIARRHAYVAENGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEIAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKLNEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH G V + EKMSKSL NFFT+R + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHTGMVMVDREKMSKSLNNFFTVRDVLAHYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + + SP AR F M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDESASPAGGEAFEAR---------------FCTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + E R + +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IARDINRLKAEDAAAANALAAELRR--------LAGVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D E+ E D LI++R AR++KD++ +D R LT G
Sbjct: 394 LEQDPELFLQSGAQPCDD-----EVQEIDA--LIKQRNDARQSKDWAAADAARNRLTDMG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDGPQGTIWR 459
>gi|343506381|ref|ZP_08743870.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
gi|342802714|gb|EGU38117.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
Length = 460
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 288/491 (58%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG RV V+S KR+P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++++ R N A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLSVEAAGGDEYQVRFNDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +Q +L + ++ EV+ IL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKTENIEQAS-----ALGVVMRQMAEVIGIL-- 394
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + LK A E+ E + LI+ R +R +KD++ +D R L GI
Sbjct: 395 -----HQDAEAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNEMGIE 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGAEGTTWR 458
>gi|407708038|ref|YP_006831623.1| 10 kDa chaperonin [Bacillus thuringiensis MC28]
gi|407385723|gb|AFU16224.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis MC28]
Length = 465
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 295/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 EVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H N + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|433480605|ref|ZP_20437886.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|433514404|ref|ZP_20471186.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|433520767|ref|ZP_20477475.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|433541958|ref|ZP_20498396.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
gi|432213882|gb|ELK69792.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|432245366|gb|ELL00836.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|432251383|gb|ELL06752.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|432275029|gb|ELL30107.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
Length = 473
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN----------- 352
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+N F+A M+DD T + F+ L + K L L+
Sbjct: 353 --VNDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|110799706|ref|YP_697116.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|168211251|ref|ZP_02636876.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
gi|122958668|sp|Q0TMM4.1|SYC_CLOP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110674353|gb|ABG83340.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|170710753|gb|EDT22935.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
Length = 466
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 288/490 (58%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ PG+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+SA +V IY + + E + A + +NK ++++ +M
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 361 DDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL----------------- 402
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
GA + Q+ L EE++ LI +R ARK++DF+ +D+IR +L +GI L
Sbjct: 403 --GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFTLADKIRDELKDRGIVL 454
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 455 EDTPQGVRWK 464
>gi|397904926|ref|ZP_10505801.1| Cysteinyl-tRNA synthetase [Caloramator australicus RC3]
gi|397162020|emb|CCJ33135.1| Cysteinyl-tRNA synthetase [Caloramator australicus RC3]
Length = 467
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/492 (40%), Positives = 288/492 (58%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+KIYN+MT+QKE+F PI PG+V MY CG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIKIYNTMTRQKEVFNPITPGEVKMYACGPTVYNYFHIGNARTFIVFDTIRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V +++NFTD+DDK+IRRAN+ G ++ +Y +EY D L+ T PR ++ +
Sbjct: 61 KVKFIQNFTDIDDKLIRRANEEGTTVKEVAEKYIKEYYKDADGLKIKRATVNPRATEFIG 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + +++ AYVV+GDV+F K YG+LS Q +E+ AG R+ +D RKRNP D
Sbjct: 121 EIIAFVKDLVDKGYAYVVDGDVYFDTTKFKEYGKLSHQSIEDLEAGARIEIDERKRNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W+SPWG GRPGWHIECS M+ L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKAKKEGEPAWESPWGEGRPGWHIECSTMACSLLGETIDIHGGGADLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A +YWMH ++ NN+KMSKSL NFFT R+I E+Y +R F++S HYR+
Sbjct: 241 QSEARNGKPFANYWMHVAYLNVNNQKMSKSLNNFFTAREILEKYDAEVVRLFMLSGHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S+ LD A A+ +Y + + E + ++ TA + ++ R+ +
Sbjct: 301 PINFSIELLDQAKAALERLYNAIANLEHVIETSEDRELTAE-ELEFFNRLDSFRERYIEV 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ ++ F D ++ +N+++ K+ Q+ L LI L
Sbjct: 360 MDDDFNTADGISVIF-DLVREVNTNIKEGSPKKLAQKALDLIREL--------------- 403
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
G+ +L++ +L + Q ARK K+++ +D+IR L GI
Sbjct: 404 ----GSPLGILEKSTKGSLDEEIERLIEERQ------KARKEKNYALADKIRDQLKEMGI 453
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 454 ILEDTPQGVRWK 465
>gi|407892682|ref|ZP_11151712.1| cysteinyl-tRNA ligase [Diplorickettsia massiliensis 20B]
Length = 470
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 286/492 (58%), Gaps = 29/492 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++TQQKE F P++ G+V +YVCG+T YDL H+GHAR V+FD++ RYL++ V
Sbjct: 2 LKIYNTLTQQKETFKPLIAGQVSLYVCGMTVYDLCHIGHARVLVAFDVIVRYLKNRGLSV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII+RA + E+ L+ R + D A L +PPT +P+ ++ + +I
Sbjct: 62 KYIRNITDIDDKIIQRAQENHESITELTTRMIEAMHEDFAQLNLMPPTQEPKATESIAEI 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I +++ AY E D+F+A++ YG L+ Q LE R G RVAV+ K++P DF
Sbjct: 122 IQLIQILLDKGVAYQAENRDIFYAIDTFKTYGALAHQDLEKLRHGSRVAVELNKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EPSW+SPWGPGRPGWHIECSAMS L +FDIHGGG+DL+FPHH+NEIAQ
Sbjct: 182 VLWKAAKPNEPSWESPWGPGRPGWHIECSAMSMAALGEQFDIHGGGLDLVFPHHQNEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V W+H G V N +KMSKSLGNFFT+R + Y +R+FL+++HYRSP
Sbjct: 242 SEAATDKKFVQTWIHVGFVQVNRQKMSKSLGNFFTLRDMLAEYPAEVVRYFLMASHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
++YS L A A+ +Y TL + + G + ++ + F A M
Sbjct: 302 IHYSQENLQLAQAALQRLYTTLFEVD----NLGASGHPEINQDSLTTLLSSYEESFQAAM 357
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F + ++ +K P + L I +K+ +LG
Sbjct: 358 DDDFNTPEALAVLF-----VMTHEIHRIKATDPNKAIL--------IAQVLKKQATVLG- 403
Query: 438 LPPGAYSEVLQQLKDKALKRA--ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+LQQ LK ++ + LI+ R AR KD+ +D IR +L + G
Sbjct: 404 --------ILQQNPKDFLKSGVQQIDSAKIESLIQAREKARAGKDWKTADAIRQELEQMG 455
Query: 496 IALMDMGKETIW 507
IAL D + + W
Sbjct: 456 IALKDTPQGSDW 467
>gi|18311409|ref|NP_563343.1| cysteinyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|168214716|ref|ZP_02640341.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|168217920|ref|ZP_02643545.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|182626995|ref|ZP_02954725.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|21264002|sp|Q8XHQ5.1|SYC_CLOPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|18146093|dbj|BAB82133.1| cysteine-tRNA ligase [Clostridium perfringens str. 13]
gi|170713805|gb|EDT25987.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|177907665|gb|EDT70289.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|182380037|gb|EDT77516.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
Length = 466
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 288/490 (58%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ PG+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+SA +V IY + + E + A + +NK ++++ +M
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 361 DDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL----------------- 402
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
GA + Q+ L EE++ LI +R ARK++DF+ +D+IR +L +GI L
Sbjct: 403 --GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVL 454
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 455 EDTPQGVRWK 464
>gi|423387424|ref|ZP_17364678.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|423526612|ref|ZP_17503057.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB1-1]
gi|401629007|gb|EJS46835.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|402455652|gb|EJV87433.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB1-1]
Length = 465
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 298/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE FTP+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIDALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 461
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 283/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ +V +P AR F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKAED--------ITAANALAAELRKLAHVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q + + E LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQSGAQADGDEVAKIE-------ALIKQRNDARTSKDWALADSARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T+WR
Sbjct: 447 IVLEDGPQGTVWR 459
>gi|414070586|ref|ZP_11406569.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
gi|410807040|gb|EKS13023.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
Length = 459
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 282/494 (57%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IVMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ + Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D E + N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRDVEPVECDLEG---------------NEFVAKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + LN +K+ Q QL+ I LR I N +LG
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKESDVVQAGQLAFI--LRSIGN-------VLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
V QQ + L+ + E + LI +R AR +KD++ +D+ R L
Sbjct: 393 ---------VAQQAPEAFLQGGQDDGEVATIEALIVKRNEARTSKDWAAADEARDALNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 444 GVILEDSAGKTTWR 457
>gi|123443257|ref|YP_001007231.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|187470968|sp|A1JNP9.1|SYC_YERE8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122090218|emb|CAL13084.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 461
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 282/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANALAAELRKLAYVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E+ LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQSGAQTDDDEVAKIEV-------LIKQRNDARSSKDWALADSARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|34222758|sp|Q9JWJ3.1|SYC_NEIMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
Length = 699
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN----------- 578
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+N F+A M+DD T + F+ L + K L L+
Sbjct: 579 --VNDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 624
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 625 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 672
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 673 SDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
gi|421678924|ref|ZP_16118806.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
gi|410391847|gb|EKP44211.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
Length = 473
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|381401996|ref|ZP_09926885.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
gi|380833122|gb|EIC13001.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
Length = 469
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/502 (42%), Positives = 281/502 (55%), Gaps = 50/502 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+ P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ G L+ + D L L P +P+ ++H+ Q+
Sbjct: 62 TYVRNITDIDDKIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P DF
Sbjct: 122 IQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ--------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
SC A C S+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y P +
Sbjct: 242 SCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVV 301
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 365
R F++ AHYRSPLNYS LD A +++ +Y TL + A E+
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFELTEN------------- 348
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
N+ +F A M+DD T+ ++ F+ L + K L+ +
Sbjct: 349 TNEYTRKFFAAMNDDFGTAEAMSVLFE------------LANEANKHNSAEFAGCLKALG 396
Query: 426 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 485
+LGLL + + D L E+ E LI +R AR+ K++++SD
Sbjct: 397 G-------VLGLLQEEPQAFLQSGASDDGLSADEINE-----LIAQRKTARETKNWAESD 444
Query: 486 QIRADLTRKGIALMDMGKETIW 507
+IR L I + D T W
Sbjct: 445 RIRDVLAAHKIIVKDGADGTTW 466
>gi|196047745|ref|ZP_03114944.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225862142|ref|YP_002747520.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|376264117|ref|YP_005116829.1| cysteinyl-tRNA synthetase [Bacillus cereus F837/76]
gi|254765177|sp|C1ET19.1|SYC_BACC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|196021423|gb|EDX60131.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225788057|gb|ACO28274.1| cysteine--tRNA ligase [Bacillus cereus 03BB102]
gi|364509917|gb|AEW53316.1| Cysteinyl-tRNA synthetase [Bacillus cereus F837/76]
Length = 465
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|402758353|ref|ZP_10860609.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 473
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 300/491 (61%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ Q D A+L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIQAMNEDAANLGCAEPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI +++ AY GDV+F V K NYGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGTLVDKGAAYPAANGDVYFEVSKFNNYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + + Q +G+ E + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQ------QVYGQ-----KTVETLEQGFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATMLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +ALK L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHDVDEFLKSDIGQEALK---LSDTEIENFIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|377821178|ref|YP_004977549.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
gi|357936013|gb|AET89572.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
Length = 465
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/498 (43%), Positives = 295/498 (59%), Gaps = 44/498 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K+LFTP+ G+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLRIYNTLARDKQLFTPLREGEVRMYVCGITVYDYCHVGHARMFVVFDIVQRWLRESGYK 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + E +L++R+ DM L +PR +D + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENNEPIKALTHRFIDAMHEDMDALGVARADIEPRATDFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + N AY +GDV +AV K +YG+LSG+ +E+ RAGERVA + K +P D
Sbjct: 123 MLGMIDALQANGYAYHAKDGDVNYAVRKFADYGKLSGKSIEDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AK GEP WDS WG GRPGWHIECSAM L +FDIHGGG+DL FPHHEN
Sbjct: 183 FVLWKQAKPGEPVDSGWDSKWGRGRPGWHIECSAMGCTLLGDQFDIHGGGMDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR++ E++ +R F+ AH
Sbjct: 243 EIAQSEGATGKTFVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIARAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + +D A +A+ +Y L+D E + A+ F
Sbjct: 303 YRSPLNYSDVHIDDAKNALTRLYTALKDVEPDNQQLDWNEANAQ--------------RF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ M+DD NT ++ F + S +N + +Q +KE+
Sbjct: 349 QSAMNDDFNTPVAVSVLFD-----LASEVNRTRDSALARQ--------------LKELAG 389
Query: 434 ILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P A+ LQQ + LT +++ I ER AA++ K+++++D+IRA+L
Sbjct: 390 VLGLLQREPRAF---LQQAGGTGSQEG-LTPQEIEAKIAERIAAKQAKNYAEADRIRAEL 445
Query: 492 TRKGIALMDM-GKETIWR 508
GIAL D G T WR
Sbjct: 446 LEAGIALEDKPGGSTEWR 463
>gi|153952840|ref|YP_001393605.1| cysteinyl-tRNA synthetase [Clostridium kluyveri DSM 555]
gi|219853505|ref|YP_002470627.1| hypothetical protein CKR_0162 [Clostridium kluyveri NBRC 12016]
gi|187629803|sp|A5N4M6.1|SYC_CLOK5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765185|sp|B9DY88.1|SYC_CLOK1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146345721|gb|EDK32257.1| CysS [Clostridium kluyveri DSM 555]
gi|219567229|dbj|BAH05213.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 465
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 292/490 (59%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++I+N+MT++KE F P++PG++ MYVCG T Y+ H+G+AR V FD + RY E+ +V
Sbjct: 1 MRIFNTMTRRKEEFVPLIPGEIKMYVCGPTVYNFFHIGNARTFVVFDTVRRYFEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AND L +R+ EY D L T PR + ++ +I
Sbjct: 61 NFVQNFTDIDDKMIKKANDENITVQQLGDRFIDEYYRDADALNIKRATVNPRATLYISKI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ AY V+GDV+F +K NYG+LSGQ +E ++G R+ +D RK+NP DFA
Sbjct: 121 IEFIQDLIDKGYAYSVDGDVYFNAKKFNNYGKLSGQNIEQLQSGARIDIDERKKNPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEPSW+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 VWKSEKKGEPSWESPWGMGRPGWHIECSCMAYNILGETIDIHAGGSDLKFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
YWMH+ V NN+KMSKSL NFFT R+I ++Y P +R F++S HYR+P+
Sbjct: 241 EGRTGKVFAKYWMHSAFVNINNQKMSKSLNNFFTTREILDKYEPDVIRLFMLSGHYRTPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S+ LDS A+ I ++ + E S + G ++ +N + + +M
Sbjct: 301 NFSIELLDSTKSALDRICNSIINLEELSSKVKNDG-ILDSEIKYKEHLNSYKQRYIEKMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F D ++ IN++++ + + L+LI L
Sbjct: 360 DDFNTADAISVIF-DLIRDINTNIDENSSMEIIKYSLALIREL----------------- 401
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
G+ +LQ+ K ++ E +V LIE+R ARK+K+++ +D+IR DL KGI L
Sbjct: 402 --GSPLGILQKSKRGSI------ETEVELLIEKRQKARKDKNWALADKIRDDLKDKGIIL 453
Query: 499 MDMGKETIWR 508
D W+
Sbjct: 454 EDTSDGVRWK 463
>gi|423620302|ref|ZP_17596133.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
gi|401248862|gb|EJR55183.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
Length = 465
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 EVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGVRIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGEGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDHNEKW----LAE--MEKFQAAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
Length = 472
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/496 (41%), Positives = 300/496 (60%), Gaps = 39/496 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N+MT+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 7 MKLFNTMTRQKEEFKPIKDGEVNMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGYKV 66
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ L +R+ +EY D L T PR ++ M++I
Sbjct: 67 NFIQNFTDIDDKMIKKANEENITVKELGDRFIEEYYKDSDGLNIKRATVNPRATEFMDEI 126
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +I+ AY V+GDV+F+ +K YG+LSGQ LE+ +AG R+ VD RK++P DFA
Sbjct: 127 VAFVKDLIDKGYAYKVDGDVYFSTKKFTEYGKLSGQNLEDLQAGARITVDERKQDPMDFA 186
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEPSW+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 187 IWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQS 246
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMH+ ++ NN+KMSKSL NFFT R+I ERY +R F++SAHYR+PL
Sbjct: 247 EARNGKAFANYWMHSAYLNINNKKMSKSLNNFFTTREILERYDAEVIRLFMLSAHYRTPL 306
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED------CINKLRDE 372
N+S L+SA + +Y ++ + E L +I ED +N +++
Sbjct: 307 NFSDELLESAKASNERLYNSIGNLERLLDE-------VKIEKMTEDEKEYTKVLNSYKEK 359
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
+ +M DD NT+ + F D +K IN+ +N +S +++ N E++
Sbjct: 360 YIEKMDDDFNTADAIAVIF-DLIKEINTHVNA--------------DSSKELVNYSLEII 404
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
R LG +P G +LQ K L +L E + LIE+R ARK+++++ +D+IR DL
Sbjct: 405 RELG-MPLG----ILQ--KSTML---DLNAE-IEGLIEQRQQARKDRNWALADKIRDDLK 453
Query: 493 RKGIALMDMGKETIWR 508
+GI L D + W+
Sbjct: 454 ARGIVLEDTPQGVRWK 469
>gi|385858044|ref|YP_005904556.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 473
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN----------- 352
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+N F+A M+DD T + F+ L + K L L+
Sbjct: 353 --VNDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|148244266|ref|YP_001218960.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
gi|146326093|dbj|BAF61236.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
Length = 462
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/492 (42%), Positives = 290/492 (58%), Gaps = 35/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE+F PI KVG+YVCG+T YD H+GHAR V FD++ R+L V
Sbjct: 2 LKIYNTLSKQKEIFHPINNNKVGIYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHFSNV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ +L+NR+ D L LPP +PR ++ MEQI
Sbjct: 62 EYVRNITDIDDKIIKRAVENKEDIYTLTNRFINAMHEDEHALGILPPDVEPRATNTMEQI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY GDV+++V NYG+ S + L G R+ V+S K++P DF
Sbjct: 122 FCMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKFSRKNLNKLEIGARIKVESAKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAMS H+L + FDIHGGG+DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWSSPWGKGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G V NN+KMSKSL NFFTIR + + Y+ LR+F++S+HY SP
Sbjct: 242 SEGANNCTFVNIWMHVGFVNINNKKMSKSLNNFFTIRNVLKNYNGEILRYFIMSSHYHSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LN+S L+ A ++ +Y T++ + + +T I+ + + F+ +
Sbjct: 302 LNFSDENLNKAKSSLSRLYTTIRGLNTS------NVRTEEISIHFDYSV-----RFNEAL 350
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L+ F+ A K +N ++++ Q +L + L+K+
Sbjct: 351 DDDFNTPIALSVLFELA-KIVN-----IQRENNTDQAKTLAQLLKKL------------- 391
Query: 438 LPPGAYSEVLQQLKDKALKRA-ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
G Y +LQ DK LK+ L++E + I R AR NKDF+ SD IR +L + I
Sbjct: 392 ---GGYIGILQMNADKFLKQGISLSDEQINIKITNRNKARINKDFTLSDYIRDELAKFDI 448
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 449 ILEDNINGTTWR 460
>gi|418021756|ref|ZP_12660775.1| cysteinyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
gi|347602886|gb|EGY27832.1| cysteinyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
Length = 497
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/506 (42%), Positives = 289/506 (57%), Gaps = 36/506 (7%)
Query: 4 SKETGTVAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVS 63
++ + + P+ + LKI+N++++QKE+F PI GK+GMYVCG+T YDL H+GH R V+
Sbjct: 22 ARPSSRIEEPRNIIMLKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVA 81
Query: 64 FDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCL 123
FD++ RYL +L +TYVRN TD+DDKII+RA + E L+ R E D L L
Sbjct: 82 FDVIVRYLRYLGYHLTYVRNITDIDDKIIKRAAENNETCQQLTERMMIEMYRDFDALNIL 141
Query: 124 PPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAG 182
P +P+ + H+ +I +I ++I AY+ +GDV FAV+ +PNYG LS Q LE+ +AG
Sbjct: 142 RPDEEPQATAHIAEIIALIKKLIEGKHAYIAADGDVVFAVKSAPNYGLLSRQNLEHLQAG 201
Query: 183 ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 242
RVA+ K +P DF LWK A G+PSWDSPWG GRPGWHIECSAM+A L FDIHGG
Sbjct: 202 ARVAIADGKEDPMDFVLWKRALPGDPSWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGG 261
Query: 243 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 302
G DL+FPHHENEIAQS A D V+YWMH G V KMSKSL NFFTIR + + Y
Sbjct: 262 GSDLLFPHHENEIAQSTCAHGDPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLDHYDA 321
Query: 303 LALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA 362
+R+FL+SAHYRS L+YS L + A+ +Y L+ + +TA A
Sbjct: 322 ETVRYFLMSAHYRSQLDYSEENLRQSRIALERLYIALRGTD----------ETASTAAAG 371
Query: 363 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 422
E+ + RD M DD NT F I +N LK + L +LR
Sbjct: 372 ENFEKRFRDA----MDDDFNTPEACAVLFD-----IAREVNRLKTEDNAAAS-GLAATLR 421
Query: 423 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 482
+ ++LGLL LQ + + + E+ LIE+R AR+ K+++
Sbjct: 422 SMA-------QVLGLLTQKP-EHFLQAVNHSEIAKIEV-------LIEQRNTARQQKNWA 466
Query: 483 KSDQIRADLTRKGIALMDMGKETIWR 508
+D R L I L D K T WR
Sbjct: 467 LADAARHQLNEMKITLEDGPKGTTWR 492
>gi|312885230|ref|ZP_07744908.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367089|gb|EFP94663.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 459
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 292/491 (59%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII RAN+ E+ +L+ R E D L P +P+ ++++++I
Sbjct: 62 TFVRNITDIDDKIITRANENNESCEALTERLIGEMHRDFDALNMKRPDIEPKATEYIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F V+K YG+LS Q L+ +AG RV V+S KR+P DF
Sbjct: 122 IQLVEKLIERGFAYVADNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDSETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A + +Y +L+ ++ + PAA+ + F M
Sbjct: 302 LNYSEENLNQARAGLERLYTSLRGLDLTV-------------PAADG--EEYVSRFTEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D + IN + K + S + SL + E+ +V+ IL
Sbjct: 347 NDDFNTPEAYSVLF-DMAREIN------RVKATDNEHASALGSLLR---ELADVIGILHQ 396
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P E Q D + AE+ LI+ R +R KD++ +D R LT GI
Sbjct: 397 DP-----EAFLQGSDDKDQVAEIE-----ALIKLRNDSRAAKDWATADVARDKLTAMGIV 446
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 447 LEDGPSGTTWR 457
>gi|417546818|ref|ZP_12197904.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|421656805|ref|ZP_16097102.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|421664669|ref|ZP_16104805.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|421665433|ref|ZP_16105546.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|421672803|ref|ZP_16112757.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|400384706|gb|EJP43384.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|408503798|gb|EKK05551.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|408711840|gb|EKL57032.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|410378497|gb|EKP31115.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|410390191|gb|EKP42588.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
Length = 473
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|422347491|ref|ZP_16428403.1| cysteinyl-tRNA synthetase [Clostridium perfringens WAL-14572]
gi|373223945|gb|EHP46286.1| cysteinyl-tRNA synthetase [Clostridium perfringens WAL-14572]
Length = 466
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 288/490 (58%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ PG+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+SA +V IY + + E + A + +NK ++++ +M
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 361 DDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL----------------- 402
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
GA + Q+ L EE++ LI +R ARK++DF+ +D+IR +L +GI L
Sbjct: 403 --GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVL 454
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 455 EDTPQGVRWK 464
>gi|421896923|ref|ZP_16327318.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
Length = 465
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/498 (43%), Positives = 292/498 (58%), Gaps = 44/498 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI PG+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L++R+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A + V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRS LNYS LD A A+ +Y L+D A+ A D F
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAAVG-------------AKPDWSESHGQRF 349
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F+ + S +N K + P + N++ +
Sbjct: 350 REAMNDDFNTPVAMAVLFE-----LASEVN--KTRSP------------ALVNQLAALGG 390
Query: 434 ILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
++GLL P A+ LQ A + E V IE R A+ +DF+++D IRADL
Sbjct: 391 VMGLLGRDPHAF---LQGGVGAAADGLDTVE--VEARIEARRVAKAARDFARADGIRADL 445
Query: 492 TRKGIALMDM-GKETIWR 508
GI L D G T WR
Sbjct: 446 LAAGIVLEDKPGGVTEWR 463
>gi|359780008|ref|ZP_09283235.1| cysteinyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
gi|359372624|gb|EHK73188.1| cysteinyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
Length = 461
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 281/493 (56%), Gaps = 36/493 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN++T+ KE FTP+VPG+V MYVCG+T YD HLGH R+ V+FD++ R+L H
Sbjct: 1 MALHLYNTLTKTKEAFTPLVPGQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
++TYVRN TD+DDKII RAN GE L R + D A L P +PR +DH++
Sbjct: 61 DLTYVRNITDIDDKIINRANANGEPFTDLVARMIEAMHEDEARLNIRKPDQEPRATDHID 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V + YG+LS +R+E+ R G R+ K +P
Sbjct: 121 GMHAMIQTLIDKGYAYAAGNGDVYYRVNRFAGYGKLSRRRVEDLRIGARIEPGEAKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKAAK GEPSW SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEI
Sbjct: 181 DFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSTCCLGETFDIHGGGNDLEFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + + W+H G +T N EKMSKSLGNFFT+R++ E+YHP +R+ LI++HYR
Sbjct: 241 AQSEAATGKTYANAWLHCGMITINGEKMSKSLGNFFTLREVLEKYHPEVVRYLLIASHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y +L+ A + E G R F
Sbjct: 301 SPINYSEDNLREAKGALERFYHSLKGLPQAPAKGGE-GYAER---------------FAQ 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ F+ + +N L++ P E+ EVL +L
Sbjct: 345 CMDDDFNTAGACGVLFE-----LAREINRLRESDPAAAAGLAGRL-----RELGEVLGVL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P L+ A R + E V LI+ R AAR K++++SD+IR LT G
Sbjct: 395 QLEPEAF-------LRADAAGRVDAAE--VEALIQARLAARAEKNWAESDRIRDQLTALG 445
Query: 496 IALMDMGKETIWR 508
+ L D T WR
Sbjct: 446 VVLEDGKGGTTWR 458
>gi|386309410|ref|YP_006005466.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418240598|ref|ZP_12867136.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550489|ref|ZP_20506533.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
gi|318604716|emb|CBY26214.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351780011|gb|EHB22100.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431789624|emb|CCO69573.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
Length = 461
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 283/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLVYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ +V +P AR F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKAED--------ITAANALAAELRKLAHVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q + + E LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQSGAQADGDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T+WR
Sbjct: 447 IVLEDGPQGTVWR 459
>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 699
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 283/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN----------- 578
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+N F+A M+DD T + F+ L + K L L+
Sbjct: 579 --VNDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 624
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 625 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAE 672
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 673 SDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|118475860|ref|YP_893011.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|187629790|sp|A0R8G1.1|SYC_BACAH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118415085|gb|ABK83504.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
Length = 465
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIHELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|343513226|ref|ZP_08750335.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
gi|342793531|gb|EGU29323.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
Length = 460
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 288/491 (58%), Gaps = 35/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++T+QKE F PI GK+GMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RAN+ GE+ SL+ R E D L P +PR ++ + +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV F V K YG+LS Q L+ +AG RV ++S KR+P DF
Sbjct: 122 IALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGARVDIESAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWG GRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ +Y +L+ ++++ R N A M
Sbjct: 302 LNYSEENLNQARASLERLYTSLRGLDLSVEAAGGDEYQTRFNDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +Q +L + ++ EV+ IL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REINRLKAENIEQAS-----ALGVVMRQMAEVIGIL-- 394
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + LK A E+ E + LI+ R +R +KD++ +D R L GI
Sbjct: 395 -----HQDAEAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNEMGIE 447
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 448 LEDGAEGTTWR 458
>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
Length = 460
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/491 (42%), Positives = 295/491 (60%), Gaps = 37/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN+++ +KE F P+VPGKVGMYVCG T YD H+GHARA +SFD++ R++ ++
Sbjct: 2 LKVYNTLSGKKEEFVPLVPGKVGMYVCGNTVYDYCHIGHARAMISFDIIARHIRFSGFDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E P SL+ R + D L P +P+ ++ M++I
Sbjct: 62 NYVRNITDVDDKIIKRAAENDETPESLTLRMIEAQTQDELKLGNKLPDREPKATEFMQEI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI+ +++ AY GDV+F EK YG+L+ ++LE+ AG R+ V+S K NPADF
Sbjct: 122 IDMISVLVDKGFAYQGSTGDVYFRTEKHEAYGKLNNRKLEDMLAGARIDVESAKENPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GE W SPWG GRPGWHIECSAMS + L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKEGEVHWQSPWGIGRPGWHIECSAMSTNCLGPHFDIHGGGPDLKFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH G V NNEKMSKSLGNFFT+R + E+Y+P +R ++S+ YRSP
Sbjct: 242 SECANGTDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVIRFLMVSSQYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI-NKLRDEFHAR 376
++YS L A + +Y +LQ +D I + + +
Sbjct: 302 IDYSEQSLLEAKVGLERMYTSLQG-----------------QALTDDYIASSYTERYQQA 344
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT ++ F D ++ +N + + S ++ + E+ + +LG
Sbjct: 345 MDDDFNTPVAISVLF-DLVRELNKA------------KASAADNAPILAKELSVLAELLG 391
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
LL G E LK+ L ++E ++ LI ER ARK+K+F++SD+IR +L+ +GI
Sbjct: 392 LL--GQDPEYF--LKNSVLNNG-ISEAEIETLIAERIQARKDKNFARSDEIRDELSEQGI 446
Query: 497 ALMDMGKETIW 507
L+D + T W
Sbjct: 447 TLLDSREGTSW 457
>gi|445434059|ref|ZP_21439862.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
gi|444756927|gb|ELW81464.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
Length = 473
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 298/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDHSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQAAVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|417551275|ref|ZP_12202353.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417564947|ref|ZP_12215821.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395556703|gb|EJG22704.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400385730|gb|EJP48805.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 473
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|423578058|ref|ZP_17554177.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-D12]
gi|401203638|gb|EJR10474.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-D12]
Length = 465
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD------LKKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKN 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|226735044|sp|B7GJ46.1|SYC_ANOFW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 465
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/497 (40%), Positives = 293/497 (58%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++++YN++T++KE F P+ P KV MYVCG T Y+ H+G+AR A+ FD + RYL+
Sbjct: 1 MSIQVYNTLTRKKEPFIPLEPNKVKMYVCGPTVYNYIHIGNARPAIVFDTIRRYLQFRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+IR A +LGE+ +++ R+ + Y D+ L C PRV+++++
Sbjct: 61 EVQYVSNFTDVDDKLIRAARELGEDVPTIAERFIEAYFEDITALGCKKADVHPRVTENID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I Q+I AY V+GDV++ + +YG+LS Q ++ ++G R+ V +K +P D
Sbjct: 121 TIIQFIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSVDELKSGARIEVGEKKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YW+HNG++ +NEKMSKSLGNF + I ++ P LR F++S HYR
Sbjct: 241 QSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFILVHDIIKQVDPQVLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L+SA L+ + A + + H + N D I +LR+
Sbjct: 301 PINYSQPLLESARSG-------LERLKTAYANLK-HRLESSTNLTTNDEQWLAKIEELRN 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
EF M DD NT++ + F+ A N+ + QQ+ ++ + +++
Sbjct: 353 EFIREMDDDFNTANGIAVLFELA-----KQANVYLMENHTSQQV-----IQAFLQQFEQL 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGL +L++ EL +E++ LI++R ARKN+DF+ +D+IR +L
Sbjct: 403 FDVLGL----------------SLQQDELLDEEIEALIQQRIEARKNRDFALADRIRDEL 446
Query: 492 TRKGIALMDMGKETIWR 508
K I L D + T WR
Sbjct: 447 KAKNIILEDTPQGTRWR 463
>gi|333376196|ref|ZP_08467988.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 469
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/502 (42%), Positives = 281/502 (55%), Gaps = 50/502 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+ P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RAN+ G L+ + D L L P +P+ ++H+ Q+
Sbjct: 62 TYVRNITDIDDKIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P DF
Sbjct: 122 IQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK EP W+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAA----CQ--------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 305
SC A C S+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y P +
Sbjct: 242 SCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVV 301
Query: 306 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 365
R F++ AHYRSPLNYS LD A +++ +Y TL + A E+
Sbjct: 302 RFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFELTEN------------- 348
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
N+ +F A M+DD T+ ++ F+ L + K L+ +
Sbjct: 349 TNEYTRKFFAAMNDDFGTAEAMSVLFE------------LANEANKHNSAEFAGCLKALG 396
Query: 426 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 485
+LGLL + + D L E+ E LI +R AR+ K++++SD
Sbjct: 397 G-------MLGLLQEEPQAFLQSGASDDGLSADEINE-----LIAQRKTARETKNWAESD 444
Query: 486 QIRADLTRKGIALMDMGKETIW 507
+IR L I + D T W
Sbjct: 445 RIRDVLAAHKIIVKDSADGTTW 466
>gi|254804107|ref|YP_003082328.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 475
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/511 (42%), Positives = 291/511 (56%), Gaps = 55/511 (10%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 1 MNMT-TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 60 GYPLTYVRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATEN 119
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 120 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 179
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHEN
Sbjct: 180 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 239
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 240 EIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 299
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ +P E G +
Sbjct: 300 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKN-----TPAAEFGLSEN 354
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
N F+A M+DD T + F+ L + K L
Sbjct: 355 ANDYTR--------RFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHL 394
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 477
L+ + I+GLL + ++ L+ A+ L+ E++ LI R AR
Sbjct: 395 AGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARA 442
Query: 478 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
+K++++SD+IR L I L D T WR
Sbjct: 443 DKNWAESDRIRDLLNEHKIILEDNAGGTTWR 473
>gi|134045577|ref|YP_001097063.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
gi|132663202|gb|ABO34848.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
Length = 476
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/496 (41%), Positives = 286/496 (57%), Gaps = 31/496 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+++E F P+ +V MYVCG T YD +H GH R VSFD++ RYLEH+ V
Sbjct: 2 LKVYNTLTRKEEEFKPLTEKEVKMYVCGPTVYDHTHFGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+RAN+ G+NP LS ++ +L DMA L+ P P+V++H+ +I
Sbjct: 62 NLVINFTDIDDKIIKRANEKGKNPQELSEQFINVFLNDMATLKVKPADIYPKVTEHIPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++I AY E V+F V+K NYG+LS LE+ +G R+ +K+NP DFA
Sbjct: 122 IAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLYSGVRIETSEKKKNPEDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK EP W+SP+G GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS
Sbjct: 182 LWKTAKPREPKWESPFGEGRPGWHIECSAMSSKYLGKQFDIHGGGRDLSFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP+
Sbjct: 242 VAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEDISKEYDPEILRFFFIQRHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+Y+ + + + IY +++ ++L ++ G D + + F+ M+
Sbjct: 302 DYTAESMTHVKNNLEKIYNVIENIRISLEKSKKSGAWGENEFLLYDILKNSKHNFYEAMN 361
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES-----LRKIENEVKEVLR 433
D NT L F+ +++ +N + LSL+E+ L K + K V
Sbjct: 362 SDFNTVEALKSVFE-----VSNGVN---------KYLSLVETPSEGLLLKAFDFFKIVGE 407
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
I GL Y + + D EE + LIE R+ R K++ SD+IR L
Sbjct: 408 IFGLFE--NYFKTSSESND---------EEFIKFLIELRSDLRLQKNYEMSDKIRDGLKN 456
Query: 494 KGIALMDMGKE-TIWR 508
G + D KE TI++
Sbjct: 457 IGYLIEDNPKEGTIFK 472
>gi|420257596|ref|ZP_14760352.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404515001|gb|EKA28780.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 461
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 281/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I + AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANALAAELRKLAHVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQSGAQTDDDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|375310827|ref|ZP_09776092.1| translation initiation factor if-1 [Paenibacillus sp. Aloe-11]
gi|375077195|gb|EHS55438.1| translation initiation factor if-1 [Paenibacillus sp. Aloe-11]
Length = 467
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/492 (41%), Positives = 295/492 (59%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN+MT+ +E F P+ PGKV MYVCG T YD H+G+AR + FDL+ YLE+L
Sbjct: 1 MPLQIYNTMTRSREPFVPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDLVRSYLEYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR+A +L +++ ++ Y D+ L + PRV++ ME
Sbjct: 61 DVNYVVNFTDVDDKLIRKARELDMEVPAVAEKFIAAYHEDLTGLNVPAASINPRVTESME 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++++ AY +GDVF+ +K +YG+LSGQ LE + G R+ VD RK N D
Sbjct: 121 LIVDFIKELVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRIHVDERKENAED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE W SPWG GRPGWHIECSAM+ HYL DIHGGG DL FPHHE E A
Sbjct: 181 FVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ +NEKMSKSLGN ++ + R+ P ALR+F++S HYR+
Sbjct: 241 QSEAITGKPLARYWMHNGYIRIDNEKMSKSLGNGILVKDLRARHKPEALRYFMLSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNY+ + A ++V I + + + L+ + + ++ + ++ + +F +
Sbjct: 301 PLNYNQETMSQAENSVERIANAVANVKHRLANALKGNE--EVSAGLQTKLDGILQQFGEK 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT +T F+ +++ + ++L++ Q +L +++ + + +VLRI
Sbjct: 359 MDDDFNTPDAITAVFE----WVSEANHLLQRDVVNQAEL---QAVLHTFDSMNKVLRI-- 409
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
YSE + EL ++++ QLI ER ARK K++ ++D+IR L KGI
Sbjct: 410 ------YSE----------PKEELLDDEIEQLIAERVEARKTKNWGRADEIRDLLAAKGI 453
Query: 497 ALMDMGKETIWR 508
L D + WR
Sbjct: 454 VLEDTAQGMRWR 465
>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
Length = 473
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAVAFELSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + + L+ A+ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIARRKQARSDKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|453062355|gb|EMF03346.1| cysteinyl-tRNA ligase [Serratia marcescens VGH107]
Length = 461
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 279/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENHETCDQLTERMLAEMHADFDALLIDRPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + +P AR F M
Sbjct: 302 LNYSEENLKQARTALERLYTALRGTDADAAPAGGEAFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + I E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKSED--------MAAANGIAAELRKLAKVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q+ D + E LI++R AR KD++ +D R L
Sbjct: 394 LQQEPEQFLQGGAQVDDGEVAEIE-------ALIKQRNEARAAKDWALADAARDRLNEMN 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|445406289|ref|ZP_21431727.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
gi|444781577|gb|ELX05494.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
Length = 473
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|261820651|ref|YP_003258757.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|261604664|gb|ACX87150.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|385870832|gb|AFI89352.1| Cysteinyl-tRNA synthetase [Pectobacterium sp. SCC3193]
Length = 461
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/497 (43%), Positives = 285/497 (57%), Gaps = 46/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L + P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNIVHPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEITAVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SRCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A A+ +Y L+ +++++ HG DEF AR
Sbjct: 302 LNYSEDNLKQARAALERLYIALRGTDLSVAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KAEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P + + Q+ + +K E LI++R AR KD++ +DQ R L
Sbjct: 390 VLGLLEQDPEQFLQNGAQVDNDEVKEIE-------ALIQQRKDARAAKDWALADQARDRL 442
Query: 492 TRKGIALMDMGKETIWR 508
GI L D + TIWR
Sbjct: 443 NEMGIVLEDGPQGTIWR 459
>gi|421907821|ref|ZP_16337690.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|393291136|emb|CCI73697.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
Length = 699
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/507 (42%), Positives = 285/507 (56%), Gaps = 58/507 (11%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 579
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 580 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 624
Query: 424 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ I+GLL P A+ L+ A L+ E++ LI +R AR +K++
Sbjct: 625 LGG-------IIGLLQRDPTAF------LQGGAASDG-LSNEEIEDLIAQRKQARADKNW 670
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR L I L D T WR
Sbjct: 671 AESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|365873642|ref|ZP_09413175.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983729|gb|EHM09936.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
Length = 467
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/492 (41%), Positives = 291/492 (59%), Gaps = 28/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ I+N +T +KE F P+ GKV YVCG T YD H+G+AR + FD++ RYLE+L
Sbjct: 1 MAFNIFNDLTNKKEPFVPVEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV+NFTD+DDK+I RAN++G L++++ + Y D L T P+ ++ +
Sbjct: 61 QVKYVQNFTDIDDKMINRANEMGITVKELADKFIEAYYQDADALGIKRATVNPKATEEIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++I +I AY V+GDV+F V+ P YG+L Q LE +AG R+ VD RKR+P D
Sbjct: 121 HIIELIEILIRKGHAYQVDGDVYFDVKSYPAYGKLIRQDLEELQAGARIDVDPRKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKA K GEP+W+SPWG GRPGWHIECSAM H+L DIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKAQKPGEPAWESPWGLGRPGWHIECSAMCRHHLGETIDIHGGGCDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA V YW+HNG++ + EKMSKSLGNF T R + ++HPLA+R F++SAHYRS
Sbjct: 241 QSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDVISKFHPLAVRLFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L A A+ + + AL G + + A + R++F
Sbjct: 301 PINFSEDNLRQAQGALERLRNGWAEISFALKRQDSGGISEELRSAVRES----REQFLNA 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DDLNT+ + F I S+ + + + P +E+L + +++V RI+G
Sbjct: 357 MDDDLNTAEAIGAVF----ALIRSANSHIGSQSPLD-----LEALNEAARFLQDVDRIMG 407
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
++ ++ A+ + ++ +LI R ARK ++F ++D IR L GI
Sbjct: 408 II---------------GIENAQALDHEIEELIHRRNQARKERNFKEADAIRDKLLSMGI 452
Query: 497 ALMDMGKETIWR 508
L D + T W+
Sbjct: 453 VLEDTPQGTRWK 464
>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|424056184|ref|ZP_17793705.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425739726|ref|ZP_18857922.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|407441224|gb|EKF47730.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425496120|gb|EKU62262.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 473
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 297/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKRAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQGFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRYLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
Length = 477
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 286/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY V DV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|119945844|ref|YP_943524.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
gi|119864448|gb|ABM03925.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
Length = 461
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/495 (44%), Positives = 285/495 (57%), Gaps = 42/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F P++PGKVGMYVCG+T YD H+GH R V+FD + RYL +
Sbjct: 2 LKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TDVDDKII+RA + E+ L++R+ + D L L P +PRV+DHM ++
Sbjct: 62 NYIRNITDVDDKIIKRAAENNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPEV 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV E DV FAV+ YG+LSGQ LE RAG RV V+ KRNP DF
Sbjct: 122 IEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVEESKRNPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP W SPWG GRPGWHIECSAM+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + KMSKSL NFFTI+++ + + ++R+FLIS HYRS
Sbjct: 242 SCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y +++D ++ P D N +F M
Sbjct: 302 LNYSEDNLKQARASLERLYNSVRDLTF-----------SKDTPL--DKTNLHYQQFIKAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLRIL 435
DD NT L F A +N LK+ KQ LS L+ +L +L
Sbjct: 349 DDDFNTPGALAVLFDLA-----KEINRLKQSNIKQASLSAGLLVTLAN----------VL 393
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVL--QLIEERAAARKNKDFSKSDQIRADLTR 493
GL L Q ++ L+ E EE + LI++R AR+NKD++ +D R L
Sbjct: 394 GL---------LNQSAEQFLQGDEKNEEVAMIEALIKQRNDARQNKDWASADSARDKLAA 444
Query: 494 KGIALMDMGKETIWR 508
I L D T WR
Sbjct: 445 LKIVLEDGPGGTTWR 459
>gi|416044172|ref|ZP_11574948.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416058943|ref|ZP_11580697.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|347996476|gb|EGY37551.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347999327|gb|EGY40169.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
Length = 469
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 294/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E++V + LI++R AR KD++ +D R LT+
Sbjct: 404 L----------QLDPEQFLQAGSDEDEVAKIEALIKQRNEARTAKDWAAADAARNALTKM 453
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 GIILEDGPNGTTWR 467
>gi|154485049|ref|ZP_02027497.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
27560]
gi|149734002|gb|EDM50121.1| cysteine--tRNA ligase [Eubacterium ventriosum ATCC 27560]
Length = 470
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/496 (42%), Positives = 300/496 (60%), Gaps = 36/496 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F P+ GKV MYVCG T Y+L H+G+AR + FD RYLE+ +V
Sbjct: 1 MKIYNTLTKKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIIFDTFRRYLEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++A + G +S RY +E DM DL P T P + ++ +
Sbjct: 61 NYVSNFTDVDDKIIKKAIEEGTTAEEISQRYIKECKKDMHDLNIEPATTHPLATQEIDGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
+MI +I+ AY +G V++ K +YG+LS + +++ AG R VA + K +P
Sbjct: 121 IEMIKTLIDKGYAYDADGTVYYRTRKFKDYGKLSKKNIDDLEAGHRDIKVAGEESKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPW GRPGWHIECS MS YL + DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYLGDEIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHNG + NN+KMSKSLGNFFT+R I+E+Y LR F++SAHYR
Sbjct: 241 AQSEAANGCEFSKYWMHNGFLNINNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---E 372
SPLN+S ++SA + + I + +S +GK ++ A +++ ++ +
Sbjct: 301 SPLNFSDDLMESAKNGLERIITSGAKIRDIIS----NGKDGKVTDAEAKLLDEAKEYITK 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT++ ++ F+ +KF NS+LN + K+ + E L K+ N
Sbjct: 357 FEEAMDDDCNTANAISAVFE-LVKFANSNLN---EGSTKEFAAGVYEILDKLCN------ 406
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL-QLIEERAAARKNKDFSKSDQIRADL 491
+LG+ +L++ ++K + +ED + ++I +RA A+K++DF+ +DQIR +L
Sbjct: 407 -VLGI--------ILEKEEEK------VGDEDYIEEMIAKRAQAKKDRDFAMADQIRDEL 451
Query: 492 TRKGIALMDMGKETIW 507
KGI L D + T W
Sbjct: 452 AAKGIVLKDTREGTKW 467
>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 487
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/499 (41%), Positives = 294/499 (58%), Gaps = 21/499 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN++T +KE F PI P +V +Y CGVT YD +H+GH R+ + FD++ RYL +L
Sbjct: 1 MSLKIYNTLTGKKEDFAPIKPPQVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +VRNFTDVDDKII RA + +S++Y +EY D + P +PRV+ H+
Sbjct: 61 NVIFVRNFTDVDDKIINRAKNECVPFTVISDKYIKEYFDDAEKFRIEPADIEPRVTTHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++I+ AY V+GDV+F+V K +YG+LS + ++ AG R+ +K++P D
Sbjct: 121 DIIKFIQELIDKGYAYEVDGDVYFSVRKFKDYGKLSKRSIDELLAGARIEPGEKKKDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AKAGEP W+SPWG GRPGWH EC AM +L DIHGGG+DL FPHHENEIA
Sbjct: 181 FALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ + YW+HNG VT N +KMSKSLGN+ T+++I +Y P LR ++S HYRS
Sbjct: 241 QAESLTGKPFARYWIHNGLVTVNGQKMSKSLGNYVTLKEIYSKYEPDILRLLVLSVHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PL++S +++ A + +Q+ E+ Q+ I K + F++
Sbjct: 301 PLDFSWDKMEETKKAYERLKNAIQEYEI----LQKLPTDENFEEDLYTEIQKAQSGFYSA 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLR- 433
MSDD NT L F + +N+LK K KQ +S ++S ++ + + + R
Sbjct: 357 MSDDFNTPEALASLFG-----LVRQMNILKDKAIKQGGISKKALQSYKEAADTLHNICRD 411
Query: 434 ILGL---LPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRA 489
I GL L P +E + K K+ E +ED++ LIE R ARK K FS +D IR
Sbjct: 412 IFGLFDSLQPCVKTEEI-----KVEKQEEKLDEDLINILIEVRDKARKEKQFSIADTIRD 466
Query: 490 DLTRKGIALMDMGKETIWR 508
L KGI + D T W+
Sbjct: 467 KLAEKGIVIEDTPFGTKWK 485
>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
Length = 473
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 285/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE FTPI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAK GEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKVGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|416214986|ref|ZP_11623197.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
Length = 473
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 283/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|304413758|ref|ZP_07395202.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
gi|304283849|gb|EFL92243.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
Length = 506
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 289/505 (57%), Gaps = 40/505 (7%)
Query: 10 VAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYR 69
+ P+ + LKI+N++++QKE+F PI GK+GMYVCG+T YDL H+GH R V+FD++ R
Sbjct: 34 IEKPRNIIMLKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVAFDVIVR 93
Query: 70 YLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQP 129
YL +L ++TYVRN TD+DDKII+RA + E L+ R E D L L P +P
Sbjct: 94 YLRYLDYDLTYVRNITDIDDKIIKRAAENNETCQQLTERMMIEMYRDFDALNILRPNEEP 153
Query: 130 RVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 188
+ + H+ +I +I ++I AY+ +GDV FAV+ +PNYG LS Q LEN +AG RVA+
Sbjct: 154 QATAHITEIIALIKKLIEGKHAYIAADGDVVFAVKSAPNYGLLSRQNLENLQAGARVAIA 213
Query: 189 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 248
K +P DF LWK A G+PSWDSPWG GRPGWHIECSAM+A L FDIHGGG DL+F
Sbjct: 214 DGKEDPMDFVLWKRALPGDPSWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGGGSDLLF 273
Query: 249 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 308
PHHENEIAQS A D V+YWMH G V KMSKSL NFFTIR + + Y +R+F
Sbjct: 274 PHHENEIAQSTCAHGDPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLDHYDAETVRYF 333
Query: 309 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 368
L+SAHYRS L+YS L + A+ +Y L+ + +TA A E+ +
Sbjct: 334 LMSAHYRSQLDYSEENLRQSRIALERLYIALRGTD----------ETASAAAAGENFEKR 383
Query: 369 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 428
RD M DD NT F I +N LK + L +LR +
Sbjct: 384 FRDA----MDDDFNTPEACAVLFD-----IAREVNRLKTEDNAAAS-GLAATLRSMA--- 430
Query: 429 KEVLRILGLLP--PGAYSEVLQQ---LKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
++LGLL P + + + KD + + E LIE+R AR+ K++
Sbjct: 431 ----QVLGLLTQKPEHFLQAVNHSEIAKDTEIAKIE-------ALIEQRNTARQQKNWVL 479
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
+D+ R L I L D + T WR
Sbjct: 480 ADEARHQLNEMKITLEDGPQGTTWR 504
>gi|423671539|ref|ZP_17646543.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM034]
gi|401291928|gb|EJR97593.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM034]
Length = 465
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H N + K + F
Sbjct: 301 PINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A + N L L++ K +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA-NYANQYL--LEEHTSK----VVIEAYVK---QLETLFS 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R AR+N+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKG 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|384142630|ref|YP_005525340.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|347593123|gb|AEP05844.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
Length = 473
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 297/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQYLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|300715706|ref|YP_003740509.1| cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
gi|299061542|emb|CAX58656.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
Length = 462
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/494 (42%), Positives = 286/494 (57%), Gaps = 39/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGETVEVLTNRMIGEMHKDFAALNILPPDQEPRATRHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
++++++I+ + AYV GDV F+V P YG+LS Q LE +AG RV V+ KRNP D
Sbjct: 122 IEIVSKLIDREHAYVASNGDVMFSVPSDPQYGQLSRQDLEQLQAGARVEVEQDVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKANEPSWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + V+YWMH+G V + EKMSKSL NFFT+R + + + +R FL+S HYRS
Sbjct: 242 QSTCAHEGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHFDAETVRCFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L A A+ +Y +++ + + PA + F
Sbjct: 302 QLNYGEDNLKQARSALERLYTAIRNTD------------SSAEPAGGEVFET---RFREA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F A +N LK + + + + +++++ +LG
Sbjct: 347 MDDDFNTPEAYSALFDMA-----REVNRLKAED--------MSAANGLAAKLRQLAGVLG 393
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LL P + + Q D + E LI +R AR+ K+++++D R L
Sbjct: 394 LLEQDPELFLQNGAQSNDDEVAEIE-------ALIRQRLDARREKNWAQADMARDKLVAM 446
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 447 GIVLEDGPQGTSWR 460
>gi|110803392|ref|YP_699686.1| cysteinyl-tRNA synthetase [Clostridium perfringens SM101]
gi|122956489|sp|Q0SQC1.1|SYC_CLOPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110683893|gb|ABG87263.1| cysteine--tRNA ligase [Clostridium perfringens SM101]
Length = 466
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 288/490 (58%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ PG+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGITVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+SA +V IY + + E + A + +NK ++++ +M
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 361 DDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL----------------- 402
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
GA + Q+ L EE++ LI +R ARK++DF+ +D+IR +L +GI L
Sbjct: 403 --GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVL 454
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 455 EDTPQGVRWK 464
>gi|423608085|ref|ZP_17583978.1| cysteinyl-tRNA synthetase [Bacillus cereus VD102]
gi|401238768|gb|EJR45201.1| cysteinyl-tRNA synthetase [Bacillus cereus VD102]
Length = 465
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD------LKKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|418291506|ref|ZP_12903501.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|372199758|gb|EHP13951.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
Length = 473
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 289/505 (57%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ A + +N + N +
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------Q 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 392 LAGRLKALGGIIGLLQRDP-TEFLQ----GGVASDGLSNEEIEDLIARRKQARSDKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica 020-06]
gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
(cysrs) [Neisseria lactamica 020-06]
Length = 473
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/505 (42%), Positives = 291/505 (57%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 LYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGKGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ A + +N + N +
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------Q 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL + + L+ A+ L+ E++ LI R AR +K++++
Sbjct: 392 LAGRLKALGGIIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDTAGGTTWR 471
>gi|365921978|ref|ZP_09446221.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
gi|364575078|gb|EHM52496.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
Length = 451
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/492 (43%), Positives = 274/492 (55%), Gaps = 48/492 (9%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
L+ YNS+++QKE F P+ G+ GMYVCG+T YD H+GHAR V FD + R+L L E
Sbjct: 3 ALQFYNSLSRQKEPFHPLHAGRTGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRALGYE 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
+ YVRN TD+DDKII RA + GE +L+ R+ D A L CLPP +PR +D +
Sbjct: 63 LHYVRNITDIDDKIIVRAAENGEPIAALTERFTAAMHEDEAALGCLPPDEEPRATDAVPG 122
Query: 138 IKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ +I +I AY + GDV++AV P YG+L+ + L++ RAGER+AV+ K +P D
Sbjct: 123 MIALIETLIKKGHAYAADNGDVYYAVRSFPGYGKLANRSLDDLRAGERIAVNEAKNDPLD 182
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEPSWDSPWG GRPGWHIECS MSA L FDIHGGG+DL FPHHE EIA
Sbjct: 183 FVLWKAAKPGEPSWDSPWGQGRPGWHIECSVMSAAALGEHFDIHGGGMDLKFPHHECEIA 242
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AC +V+YW+HNG V N+EKMSKSLGNFFT+R + + Y LR F++ +HYR
Sbjct: 243 QSEGACGHQHVNYWLHNGFVQINDEKMSKSLGNFFTVRDVLKHYDGETLRTFILGSHYRG 302
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNYS L A + +Y L P TA + F
Sbjct: 303 PLNYSDTALAEAKKMLTRLYTALDK-----QPLDGALDTAAVAA------------FEEA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD+NT F D + INS + + L+ L
Sbjct: 346 MNDDINTPKAFAVLF-DLARRINSG-----------------------DAHLAATLKTL- 380
Query: 437 LLPPGAYSEVLQQLKDKALK-RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G +LQQ LK L E + I ER AA+ KD++++D IR +L +G
Sbjct: 381 ----GGRLGILQQAPAVFLKGEGSLDEATITARIAERNAAKAAKDYARADAIRNELAAQG 436
Query: 496 IALMDMGKETIW 507
I L D T W
Sbjct: 437 IILKDTAGGTEW 448
>gi|416165303|ref|ZP_11607427.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|433474412|ref|ZP_20431764.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|433482842|ref|ZP_20440092.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|433484856|ref|ZP_20442070.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|433487087|ref|ZP_20444274.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|433537689|ref|ZP_20494180.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|432207068|gb|ELK63063.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|432213680|gb|ELK69591.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|432219093|gb|ELK74941.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|432220072|gb|ELK75899.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|432270438|gb|ELL25576.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
Length = 473
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 283/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|423456289|ref|ZP_17433142.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
gi|401130888|gb|EJQ38543.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
Length = 465
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H N + K + F
Sbjct: 301 PINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFS 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R AR+N+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKG 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|421675648|ref|ZP_16115568.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
gi|421693049|ref|ZP_16132696.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|404559102|gb|EKA64374.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|410381910|gb|EKP34471.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
Length = 473
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + + L L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEVLA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|238751080|ref|ZP_04612576.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
gi|238710770|gb|EEQ02992.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
Length = 473
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 283/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 14 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 73
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 74 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIPEI 133
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV GDV FAV+ P+YG LS Q L+ +AG RV + KRNP DF
Sbjct: 134 IELTERLIAREHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEIADVKRNPMDF 193
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 194 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 253
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 254 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLEYYDAETVRYFLMSGHYRSQ 313
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ +V +P AR F A M
Sbjct: 314 LNYSEENLKQARASLERLYTALRGTDVHAAPAGGAEFEAR---------------FRAAM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + I + + E++++ +LGL
Sbjct: 359 DDDFNTPEAYSVLFD-----LAREVNRLKTED--------ITAANGLAAELRKLAHVLGL 405
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q + + E LI++R AR +KD++ +D R L G
Sbjct: 406 LEQDPELFLQSGAQSDGDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELG 458
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 459 IVLEDGPQGTTWR 471
>gi|390960204|ref|YP_006424038.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
gi|390518512|gb|AFL94244.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
Length = 451
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/467 (43%), Positives = 275/467 (58%), Gaps = 20/467 (4%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCG T YD +HLGHAR V+FD++ RYLEH V V NFTD+DDKII+RAN+ GE+
Sbjct: 1 MYVCGPTVYDYTHLGHARTYVAFDVIRRYLEHRGYTVLMVMNFTDIDDKIIKRANETGED 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFA 161
P L+ R+ + +L DM L+ P PRV++HME I + + ++ AY V+F
Sbjct: 61 PKELAERFLRYFLEDMRALKVKPADIYPRVTEHMEDIIEFVRKLQEKGYAYEGSDGVYFE 120
Query: 162 VEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGW 221
V K +YG+LS +LE+ G RV KRNP DFALWK AK GEP W SPWG GRPGW
Sbjct: 121 VRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPEDFALWKKAKPGEPKWSSPWGEGRPGW 180
Query: 222 HIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNE 281
HIECS MS YL FDIHGGG DLIFPHHENEIAQS A V YW+H G + N E
Sbjct: 181 HIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQSEACTGHEWVRYWLHTGFLMVNGE 240
Query: 282 KMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD 341
KMSKSLGNF TIR++ ERY P +R F++ HYRSPL+Y+ ++ A + + +Y TL++
Sbjct: 241 KMSKSLGNFVTIREMLERYDPEVIRLFILQRHYRSPLDYTEEGMEHAKNNLERLYNTLEN 300
Query: 342 CEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 401
VA+ + + ++ A + I +F+ M DD NT+ L F+ A +N
Sbjct: 301 IRVAMERAEISFRWEKLEFEAYEAIRDAGRKFYEAMDDDFNTAEALKAVFE-ASNAVNRY 359
Query: 402 LNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELT 461
L + + PK+ L +I +EV G + + ++ +RA
Sbjct: 360 LTEV--ETPKESVLRKAWEFFRIVSEV-----------FGIFEDYFRE------QRAGEE 400
Query: 462 EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
EE + LI+ RA RK ++F+ +D+IR +L GI L D + T+W+
Sbjct: 401 EELIRLLIDVRAQLRKERNFALADRIRDELRNLGIQLEDTPQGTVWK 447
>gi|410727955|ref|ZP_11366148.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
gi|410597515|gb|EKQ52126.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
Length = 466
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/493 (40%), Positives = 298/493 (60%), Gaps = 33/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T+QKE F PI+PG+V MYVCG T Y+ H+G+ R + FD + RYLE+ +V
Sbjct: 1 MRVYNTLTRQKEEFIPIIPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTD+DDK+I +AND G + L ++Y +EY D L+ T PR ++++ I
Sbjct: 61 TFIQNFTDIDDKMINKANDEGVSVKELGDKYIKEYYQDADALRIERATINPRATEYITDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ ++I AY V+GDV+++ +K YG+L GQ LE+ +AG R++VD RK++P DFA
Sbjct: 121 IKFVEELIAAGFAYEVDGDVYYSTKKFSGYGKLVGQNLEDLQAGARISVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS
Sbjct: 181 VWKAQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHAGGMDLKFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V +N+KMSKSL NFFT R+I E Y ++R ++S HYR +
Sbjct: 241 EAVTGKPFAHYWIHSAFVNVDNKKMSKSLNNFFTAREILEEYDADSIRFLMLSGHYRIQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA---EDCINKLRDEFHA 375
N++ LDSA ++ + L +C L ++ K I+ ++K RD F
Sbjct: 301 NFTKELLDSAKSSI----ERLYNCINNLENLKDEVKKKAIDEEELKYLKSLDKYRDRFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M DD NT+ ++ F D + IN++++ I S ++ ++ E++R L
Sbjct: 357 KMDDDFNTADAISVLF-DLTRDINNNVD--------------INSSAELCDKANELIREL 401
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G P G +LQ K L E ++ +LIE+R ARKNKDF+ +D+IR DL +
Sbjct: 402 G-KPLG----ILQSHMKKDL------ETEIQELIEKRQQARKNKDFALADKIRDDLKSRN 450
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 451 IILEDTPQGVRWK 463
>gi|421797751|ref|ZP_16233787.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
gi|410395945|gb|EKP48230.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
Length = 473
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ER+ V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKKNEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAILFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|157369409|ref|YP_001477398.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
gi|187631631|sp|A8GAY0.1|SYC_SERP5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157321173|gb|ABV40270.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
Length = 461
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE+ L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTTRMLAEMHADFDSLLIERPDIEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 VEITQRLIDRGHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ +V P AR F M
Sbjct: 302 LNYSEENLKQARTALERLYTALRGTDVNAQPAGGEVFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKAED--------LTAANGLAAELRKLAKVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R L
Sbjct: 394 LQQEPELFLQGGAQADDGEVAEIE-------ALIKQRNDARKAKDWALADAARDRLNEMN 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|421555761|ref|ZP_16001686.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
gi|402328737|gb|EJU64103.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
Length = 473
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 283/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|389606841|emb|CCA45752.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha522]
Length = 699
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 282/505 (55%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 579
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 580 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKA 624
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 625 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 672
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 673 SDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|385852162|ref|YP_005898677.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 473
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 282/505 (55%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|387902615|ref|YP_006332954.1| cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|387577507|gb|AFJ86223.1| Cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
Length = 465
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/496 (44%), Positives = 291/496 (58%), Gaps = 40/496 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P PG+V MYVCG+T YD H+GHAR V FDL+ R+L +
Sbjct: 3 SLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TDVDDKIIRRA + GE+ SL++R+ D A L P +PR + + Q
Sbjct: 63 VTYVRNITDVDDKIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI Q+ N AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P D
Sbjct: 123 MLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AKA +P SW S +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ H
Sbjct: 243 EIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + LD A ++ +Y L+D E + A D F
Sbjct: 303 YRSPLNYSDVHLDDARASLTRLYTALKDVEP--------------DALALDWNEPYAQRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD+NT + F+ A + +N + + +Q KQ L R+
Sbjct: 349 AAAMNDDINTPVAVATLFELAGE-VNRTRDASLARQLKQLAGLLGLLGRE---------- 397
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
P A+ LQQ A A L +++ I R AA++ KD++++D+IRA+L
Sbjct: 398 ------PRAF---LQQGAGSAQAGA-LAADEIEARIAARVAAKQAKDYAEADRIRAELLE 447
Query: 494 KGIALMDM-GKETIWR 508
GIAL D G T WR
Sbjct: 448 AGIALEDKPGGSTEWR 463
>gi|421564183|ref|ZP_16009991.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
gi|402338983|gb|EJU74206.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
Length = 473
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/507 (42%), Positives = 285/507 (56%), Gaps = 58/507 (11%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ I+GLL P A+ L+ A L+ E++ LI +R AR +K++
Sbjct: 399 LGG-------IIGLLQRDPTAF------LQGGAASDG-LSNEEIEDLIAQRKQARADKNW 444
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR L I L D T WR
Sbjct: 445 AESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|194099737|ref|YP_002002872.1| protein CysS [Neisseria gonorrhoeae NCCP11945]
gi|385336681|ref|YP_005890628.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 475
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/511 (42%), Positives = 288/511 (56%), Gaps = 55/511 (10%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 1 MNMT-AIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 60 GYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATEN 119
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 120 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 179
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHEN
Sbjct: 180 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 239
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 240 EIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 299
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 300 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---- 355
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
N F+A M+DD T + F+ L + K L
Sbjct: 356 ---------NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHL 394
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 477
L+ + I+GLL ++ L+ A+ L+ E++ LI R AR
Sbjct: 395 AGCLKALGG-------IIGLLQ----RNPIEFLQGGAVSDG-LSNEEIEDLIARRKQARA 442
Query: 478 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
+K++++SD+IR L I L D T WR
Sbjct: 443 DKNWAESDRIRDLLNEHKIILEDSAGGTTWR 473
>gi|42779170|ref|NP_976417.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|402554324|ref|YP_006595595.1| cysteinyl-tRNA ligase [Bacillus cereus FRI-35]
gi|61216251|sp|Q73FB7.1|SYC_BACC1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|42735085|gb|AAS39025.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|401795534|gb|AFQ09393.1| cysteinyl-tRNA ligase [Bacillus cereus FRI-35]
Length = 465
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +I++ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIQAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|417572308|ref|ZP_12223162.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|421644195|ref|ZP_16084680.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421657702|ref|ZP_16097952.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421700456|ref|ZP_16139970.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421799698|ref|ZP_16235688.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|226735042|sp|B7GWA1.1|SYC_ACIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735043|sp|B7IBU3.1|SYC_ACIB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558611|sp|B0VAU1.1|SYC_ACIBY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|400207876|gb|EJO38846.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|404569987|gb|EKA75070.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408506006|gb|EKK07722.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408711688|gb|EKL56889.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410409239|gb|EKP61172.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
Length = 473
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ER+ V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|168187713|ref|ZP_02622348.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
gi|169294420|gb|EDS76553.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
Length = 466
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 296/496 (59%), Gaps = 39/496 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N+MT+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGQVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ L +R+ QEY D L T PR +++M++I
Sbjct: 61 NFIQNFTDIDDKMIKKANEENITVKELGDRFIQEYYKDADGLNIKRATVNPRATEYMDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ + +I+ AY V GDV+F ++ YG+LSGQ L++ +AG R+++D RK++P DFA
Sbjct: 121 IEFVRDLIDKGYAYEVNGDVYFNTKQFKEYGKLSGQNLDDLQAGARISIDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEPSWD PWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 181 IWKSEKPGEPSWDCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YWMH+ ++ +N+KMSKSL NFFT R+I E+Y +R F++SAHYR+PL
Sbjct: 241 EARNGKAFAHYWMHSAYLNIDNKKMSKSLNNFFTTREILEKYDAEVVRLFMLSAHYRTPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED------CINKLRDE 372
N+S L SA + +Y + + E L +I+ ED +N +++
Sbjct: 301 NFSNELLQSAKASNERLYNAIGNLERLLDE-------VKIDKITEDEKEYVKNLNSYKEK 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
+ +M DD NT+ + F D +K IN+++N K+ + L LI +E+
Sbjct: 354 YIEKMDDDFNTADAIAVIF-DLVKDINTNINTESSKELVEYSLELI----------RELG 402
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+ LG+L ++ +++ +LIE+R ARK++D++ +D+IR DL
Sbjct: 403 KPLGILQKSTILDLNTEIE---------------KLIEQRQQARKDRDWALADKIRDDLK 447
Query: 493 RKGIALMDMGKETIWR 508
+GI L D + W+
Sbjct: 448 ARGIVLEDTPQGVRWK 463
>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
Length = 476
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/511 (42%), Positives = 288/511 (56%), Gaps = 55/511 (10%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 2 MNMT-AIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 61 GYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATEN 120
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 121 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 240
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 241 EIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 300
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 301 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---- 356
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
N F+A M+DD T + F+ L + K L
Sbjct: 357 ---------NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHL 395
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 477
L+ + I+GLL ++ L+ A+ L+ E++ LI R AR
Sbjct: 396 AGCLKALGG-------IIGLLQ----RNPIEFLQGGAVSDG-LSNEEIEDLIARRKQARA 443
Query: 478 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
+K++++SD+IR L I L D T WR
Sbjct: 444 DKNWAESDRIRDLLNEHKIILEDSAGGTTWR 474
>gi|253689302|ref|YP_003018492.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511839|sp|C6DAX2.1|SYC_PECCP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251755880|gb|ACT13956.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 461
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 278/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAAENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHITDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + AA ++ F M
Sbjct: 302 LNYSEDNLKQARAALERLYTALRGTD---------------PDAAAQGGDEFEGRFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N L K + Q L +LRK+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRL-KTEDAQAANQLASALRKLSG-------VLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q+ + +K E LI++R AR KD++ +DQ R L G
Sbjct: 394 LEQDPEQFLQNGAQVDNDEVKEIE-------ALIQQRKDARAAKDWALADQARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDGPQGTIWR 459
>gi|433522782|ref|ZP_20479461.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
gi|432257297|gb|ELL12600.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
Length = 473
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 288/505 (57%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ A + +N + N +
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------Q 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 392 LAGRLKALGGIIGLLQRDP-TEFLQ----GGVASDGLSNEEIEDLIARRKQARSDKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|329925602|ref|ZP_08280443.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
gi|328939731|gb|EGG36073.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
Length = 468
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/492 (42%), Positives = 285/492 (57%), Gaps = 26/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++T+ KE F PGKV +YVCG T YD H+G+AR + FD++ Y E+
Sbjct: 1 MALQIYNTLTRMKETFVAQEPGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQGN 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR+A G ++ ++ Y D+ L T PRV+D+ME
Sbjct: 61 DVNYVVNFTDVDDKMIRKAEQTGTTVPEVAEKFINAYYEDLDGLGIPRATLNPRVTDNME 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++I+ D AY GDVF+ K +YG+LS Q L+ + G R+ VD RK NP D
Sbjct: 121 SIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKRKENPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE W SPWG GRPGWHIECSAM+ YL DIHGGG DL FPHHE E+A
Sbjct: 181 FVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPHHECEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A +YWMHNG++ NNEKMSKSLGN ++++ E+Y A+R+F++S HYR+
Sbjct: 241 QSEALTGKPLANYWMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAVRYFMLSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNYS ++ A ++V + + E L K +++ D I+ + EFH +
Sbjct: 301 PLNYSDEVMEQAQNSVERLANAAANVEHRLGT-AIGSKDDQVSQDVADKISAVLVEFHEK 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT +T FQ A S N L K+ +L E LR NE+ VLRI+
Sbjct: 360 MQDDFNTPDAITAMFQWA-----SEANQL-LKEASIPAANLHEVLRAF-NEMNSVLRIVN 412
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
EL +E++ LI ER ARKNK+++++D+IR L +GI
Sbjct: 413 ------------------TGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGI 454
Query: 497 ALMDMGKETIWR 508
L D + WR
Sbjct: 455 VLEDTAQGMRWR 466
>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
Length = 476
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/511 (42%), Positives = 288/511 (56%), Gaps = 55/511 (10%)
Query: 15 MDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHL 74
M++T IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L
Sbjct: 2 MNMT-AIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 60
Query: 75 KCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDH 134
+TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ +++
Sbjct: 61 GYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATEN 120
Query: 135 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRN 193
+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+
Sbjct: 121 IPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHEN
Sbjct: 181 PLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHEN 240
Query: 254 EIAQSCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 297
EIAQS A S+V YW+HNG + + EKMSKSLGNFFTIR++
Sbjct: 241 EIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 300
Query: 298 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 357
++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 301 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---- 356
Query: 358 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 417
N F+A M+DD T + F+ L + K L
Sbjct: 357 ---------NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHL 395
Query: 418 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 477
L+ + I+GLL ++ L+ A+ L+ E++ LI R AR
Sbjct: 396 AGCLKALGG-------IIGLLQ----RNPIEFLQGGAVSDG-LSNEEIEDLIARRKQARA 443
Query: 478 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
+K++++SD+IR L I L D T WR
Sbjct: 444 DKNWAESDRIRDLLNEHKIILEDSAGGTTWR 474
>gi|422875372|ref|ZP_16921857.1| cysteinyl-tRNA synthetase [Clostridium perfringens F262]
gi|380303641|gb|EIA15940.1| cysteinyl-tRNA synthetase [Clostridium perfringens F262]
Length = 466
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/495 (39%), Positives = 290/495 (58%), Gaps = 37/495 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ PG+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDC-----EVALSPFQEHGKTARINPAAEDCINKLRDEF 373
N+S L+SA +V IY + + EV+ E K + +NK ++++
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKVYL------ESLNKYKEKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 356 IEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL------------ 402
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GA + Q+ L EE++ LI +R ARK++DF+ +D+IR +L
Sbjct: 403 -------GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFALADKIRDELKD 449
Query: 494 KGIALMDMGKETIWR 508
+GI L D + W+
Sbjct: 450 RGIVLEDTPQGVRWK 464
>gi|417552874|ref|ZP_12203944.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|417561155|ref|ZP_12212034.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|421199231|ref|ZP_15656395.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|421456054|ref|ZP_15905397.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|421632844|ref|ZP_16073487.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|421805171|ref|ZP_16241064.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|395523737|gb|EJG11826.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|395565198|gb|EJG26846.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|400211152|gb|EJO42115.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|400393133|gb|EJP60179.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|408707563|gb|EKL52846.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|410409769|gb|EKP61693.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
Length = 473
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWPSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|429732608|ref|ZP_19267211.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|429155731|gb|EKX98388.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 459
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFV----DAFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E +V + LI++R AR KD++ +D R LT+
Sbjct: 394 L----------QLDPEQFLQAGSDEGEVAKIEALIKQRNEARTAKDWAAADAARNALTKM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIILEDGPNGTTWR 457
>gi|302390630|ref|YP_003826451.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302201258|gb|ADL08828.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/493 (41%), Positives = 290/493 (58%), Gaps = 33/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T++KE F P+ KV +Y CG T YD H+G+AR ++FD++ YL++ EV
Sbjct: 1 MRIYNTLTRRKEEFIPLNGNKVTIYTCGPTVYDFFHVGNARVFITFDVIRNYLKYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I+RAN+ G L +R+ +EY D L PR ++H+E I
Sbjct: 61 KFVQNFTDIDDKMIKRANEEGVTVKELGDRFIKEYFKDADALNIKRADVHPRATEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I AY V GDV+FA K P YG+LSGQ LE AG RV +K++P DFA
Sbjct: 121 IEFIKVLIEKGYAYEVGGDVYFAARKFPGYGKLSGQNLEELEAGARVEPGEKKKDPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEPSW SPWG GRPGWHIECSAM+ +L DIHGGG DLIFPHHENE+AQS
Sbjct: 181 LWKAKKPGEPSWPSPWGEGRPGWHIECSAMAMKHLGETIDIHGGGPDLIFPHHENEVAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A ++MH G++ NNEKMSKSLGNFFT+R I + Y+P LR ++S+HYRSP+
Sbjct: 241 EAFTGKPFARFFMHVGYLNINNEKMSKSLGNFFTVRDILKEYNPEVLRFLMLSSHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S LD + A+ +Y L A+ + +N E+ + + +++F
Sbjct: 301 NFSRELLDQSKSALERLYNAL----YAMEHLENAAPERPLNGEEEEYLRRQLENKNKFKD 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ + F D ++ N SLN + S E+++K + V E+ +L
Sbjct: 357 AMDDDFNTAGAIAVLF-DMIREFNVSLN----------ENSSREAVKKTKEMVLELGGVL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G + V L +E++ Q I+ER ARK K+++ +D+IR +L +G
Sbjct: 406 GFF--SKFEPV-------------LLDEEIEQKIKEREEARKAKNYALADKIRDELRARG 450
Query: 496 IALMDMGKETIWR 508
I L D W+
Sbjct: 451 IILEDTPAGVRWK 463
>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/498 (43%), Positives = 293/498 (58%), Gaps = 44/498 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI PG+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L++R+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A ++ V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRS LNYS LD A A+ +Y L+D A+ A D F
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAAVG-------------AKPDWSESHGQRF 349
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT + F+ + S +N K + P + N++ +
Sbjct: 350 REAMNDDFNTPVAMAVLFE-----LASEVN--KTRSP------------ALVNQLAALGG 390
Query: 434 ILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
++GLL P A+ LQ A + E V IE R A+ +DF+++D IRADL
Sbjct: 391 VMGLLGRDPHAF---LQGGVGAAADGLDAAE--VEARIEARRVAKAERDFARADGIRADL 445
Query: 492 TRKGIALMDM-GKETIWR 508
GI L D G T WR
Sbjct: 446 LAAGIVLEDKPGGVTEWR 463
>gi|421080284|ref|ZP_15541218.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
gi|401705137|gb|EJS95326.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
Length = 461
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/497 (43%), Positives = 284/497 (57%), Gaps = 46/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L + P +PR + H+ I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNIVRPDAEPRATHHIADI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ +I AYV GDV F+V+ +P YG LS Q L+ +AG RV + + KRNP DF
Sbjct: 122 IEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEITAVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 SRCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR- 376
LNYS L A ++ +Y L+ ++ ++ HG DEF AR
Sbjct: 302 LNYSEDNLKQARASLERLYIALRGTDLNVAA---HGG----------------DEFEARF 342
Query: 377 ---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT + F A +N L K + Q L +LRK+
Sbjct: 343 REAMDDDFNTPEAYSVLFDMA-----REVNRL-KAEDVQAANQLASALRKLSG------- 389
Query: 434 ILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P + + Q+ + +K E LI++R AR KD++ +DQ R L
Sbjct: 390 VLGLLEQDPEQFLQNGAQVDNDEVKEIE-------ALIQQRKDARAAKDWALADQARDRL 442
Query: 492 TRKGIALMDMGKETIWR 508
GI L D + TIWR
Sbjct: 443 NEMGIVLEDGSQGTIWR 459
>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427426577|ref|ZP_18916628.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425696633|gb|EKU66338.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
Length = 473
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|388569689|ref|ZP_10156078.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
gi|388263112|gb|EIK88713.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
Length = 477
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/509 (43%), Positives = 292/509 (57%), Gaps = 50/509 (9%)
Query: 7 TGTVAAPKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDL 66
GT ++ +TL I+N++T++ E F PI PG V MYVCG+T YDL H+GHAR+ ++FD+
Sbjct: 8 VGTAPVLRLAMTLHIHNTLTRRLEPFAPIEPGHVRMYVCGITVYDLCHVGHARSNIAFDV 67
Query: 67 LYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPT 126
R+LE VTYVRN TD+DDKIIRRA GE+ +L++R D L PT
Sbjct: 68 ARRWLEATGYRVTYVRNITDIDDKIIRRAVQNGESVRALTDRMIAAMYEDFDALGIARPT 127
Query: 127 YQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 185
+ PR +D++ Q+ D++ ++ + AY +GDV +AV + P YG+LSG+ L+ AGERV
Sbjct: 128 HDPRATDYVPQMLDIVRRLEERNLAYRSGDGDVNYAVRRFPGYGKLSGKTLDELNAGERV 187
Query: 186 AVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 242
AV K +P DF LWKAAK EP+ WDSP+G GRPGWHIECSAMS L FDIHGG
Sbjct: 188 AVAQGKDDPLDFVLWKAAKPEEPADAQWDSPYGRGRPGWHIECSAMSCALLGETFDIHGG 247
Query: 243 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 302
G DL FPHHENEIAQS A WMHNG V +NEKMSKSLGNFFTIR++ +RY
Sbjct: 248 GADLQFPHHENEIAQSEGANGVPLAKVWMHNGFVNVDNEKMSKSLGNFFTIREVLQRYDA 307
Query: 303 LALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA 362
+R F++ AHYRSPLN+S LD A A+ +Y L + A A
Sbjct: 308 ETVRFFMLRAHYRSPLNHSDAHLDDARAALKRLYTALSAVKAA--------------DVA 353
Query: 363 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 422
D + F A M DD NT L+ F + S +N + K P+Q L LR
Sbjct: 354 MDWADPFAARFKAAMDDDFNTPVALSVLFD-----LASEIN--RGKDPRQAGL-----LR 401
Query: 423 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE----ERAAARKN 478
+ +LGL LQ K L+ ++E V +IE +RA+A+
Sbjct: 402 ALGG-------VLGL---------LQADPVKYLQGGGASDELVGAVIEAKIADRASAKLA 445
Query: 479 KDFSKSDQIRADLTRKGIALMDMGKETIW 507
+DF+++D+IR +L GI L D T W
Sbjct: 446 RDFAEADRIRKELLDAGIVLKDSAAGTTW 474
>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|166200137|sp|A4JFD0.1|SYC_BURVG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/496 (44%), Positives = 291/496 (58%), Gaps = 40/496 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P PG+V MYVCG+T YD H+GHAR V FDL+ R+L +
Sbjct: 3 SLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TDVDDKIIRRA + GE+ SL++R+ D A L P +PR + + Q
Sbjct: 63 VTYVRNITDVDDKIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI Q+ N AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P D
Sbjct: 123 MLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AKA +P SW S +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ H
Sbjct: 243 EIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + LD A ++ +Y L+D E + A D F
Sbjct: 303 YRSPLNYSDVHLDDARASLTRLYTALKDVEP--------------DALALDWNEPYAQRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD+NT + F+ A + +N + + +Q KQ L R+
Sbjct: 349 AAAMNDDINTPVAVATLFELAGE-VNRTRDASLARQLKQLAGLLGLLGRE---------- 397
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
P A+ LQQ A A L +++ I R AA++ KD++++D+IRA+L
Sbjct: 398 ------PRAF---LQQGAGSAHAGA-LAADEIEARIAARVAAKQAKDYAEADRIRAELLE 447
Query: 494 KGIALMDM-GKETIWR 508
GIAL D G T WR
Sbjct: 448 AGIALEDKPGGSTEWR 463
>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 463
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 283/491 (57%), Gaps = 32/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL + +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYSGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L++R E D L P +P + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENNETCDQLTSRMLAEMHKDFDALNLERPDLEPHATHHISEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I D AYV GDV FAV+ P+YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IQLVQRLIERDHAYVAANGDVMFAVDSDPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + T + E+ F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGMD-----------TNAVAAGGEE----FEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKGED--------MAAANGLAAELRKLAHVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + LQ + E++E + LI++R AR +KD++ +D R L GI
Sbjct: 394 LAQDP-EQFLQSSAQTDVDNNEVSE--IEALIKQRNDARSSKDWALADSARDRLNEMGIV 450
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 451 LEDSPQGTIWR 461
>gi|89893193|ref|YP_516680.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|122997351|sp|Q250Q6.1|SYC_DESHY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781676|sp|B8G1U2.1|SYC_DESHD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
Length = 477
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/494 (41%), Positives = 285/494 (57%), Gaps = 23/494 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+++N+M+ QKE F P GKVGMY CG T Y+ H+G+ R V FD++ RYL +
Sbjct: 1 MALRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDKII+R + G +PL L+ Y EY D A L +P + P+ +DH+
Sbjct: 61 DVTFVQNFTDIDDKIIKRGQEEGRDPLELAQDYIGEYFKDAAALNLMPASIHPKATDHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV V RK+NP D
Sbjct: 121 EMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ + YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYR
Sbjct: 241 QAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEHFPGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++ L A + + +++ + AL ++ A + R EF
Sbjct: 301 SPLDFDDENLQMAQKGLERLQTSIRLADEALGRQGQNSADAASGQKLRAAAEEARREFAE 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N++ F+ + ++N + P E L K + E+ +L
Sbjct: 361 AMDDDFNSALAYASLFE-----LGKAINAHVQAYPYSS-----EGLLKARATLWELADVL 410
Query: 436 G--LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
G L P +E Q D+ ++ L+E RA ARK KD+ SD IR L
Sbjct: 411 GFDLAKPANQAEAGNQKLDQVMEL----------LLEVRAIARKKKDWEMSDLIRDRLKD 460
Query: 494 KGIALMDMGKETIW 507
GI L D + W
Sbjct: 461 LGIVLEDTPQGARW 474
>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 489
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/497 (41%), Positives = 295/497 (59%), Gaps = 17/497 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N++T + E F P+ P KV +Y CGVT YD SH+GH R+ + FD R+LEHL +V
Sbjct: 1 MKIHNTLTGKVEEFVPVNPPKVLIYTCGVTVYDDSHVGHGRSLIVFDTFRRFLEHLGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRNFTDVDDKII RA + + ++++NRY Y DM ++ P +PRV++HM++I
Sbjct: 61 TFVRNFTDVDDKIINRAKEECTDFMTIANRYIASYYRDMEAIRVKPADVEPRVTEHMKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I +I AY +GDV+F+V +YG+LS + E AG RV +KR+P DFA
Sbjct: 121 VDVIQSLIEKGYAYESDGDVYFSVRSFKDYGKLSKRSPEEMEAGARVEPSEKKRDPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AKAGEPSWDSPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIAQ+
Sbjct: 181 LWKSAKAGEPSWDSPWGKGRPGWHTECVAMIFKHLGETIDIHGGGLDLVFPHHENEIAQA 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMHNG VT +KMSKSLGN+ T+++I +YHP LR ++ HYRSPL
Sbjct: 241 EAVTGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLKEIYTKYHPDILRLLVLFTHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S +++ A + ++D EV L + +P D + ++ + F +S
Sbjct: 301 DFSWEKMEETQRAYDRLKGAIEDYEV-LKELEVIPGKGGAHPLY-DKVKEVEESFFESLS 358
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE------SLRKIENEVKEVL 432
DD NT L+ F + S L +K + + ++ E + R + N +K++
Sbjct: 359 DDFNTPEALSHIFS-----LVSELGKVKNRTYSEGKIDESELGAYEYASRFLLNTLKKIF 413
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADL 491
+L L P ++++ ++ L+ E+ + ++ LIE R AR+ K F +D IR L
Sbjct: 414 GLLEDLYPECE---VRRVVERELEAGEVLDTKLVDLLIEVRTLARQEKQFRIADLIRDRL 470
Query: 492 TRKGIALMDMGKETIWR 508
GI L D T W+
Sbjct: 471 KELGIELEDTPAGTRWK 487
>gi|422013258|ref|ZP_16359886.1| cysteinyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
gi|414103466|gb|EKT65041.1| cysteinyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
Length = 462
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 296/496 (59%), Gaps = 43/496 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++++QKE F PI PGK+GMYVCG+T YDL H+GH R V+FD + RYL +L ++
Sbjct: 2 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + E+ +L+ R E D L L P +PR + H+ +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVDALTARMLAEMHKDFDALNILRPNSEPRATQHIIEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +IN AYV E GDV F V+ +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITELLINRGHAYVAENGDVMFEVKTDEDYGKLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ G + PA + + F M
Sbjct: 302 LNYTEENLKQARTALERLYTALR------------GTDKNVAPAGGEI---FKARFEEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F D ++ IN + K + ++ ++ +E++ + +LGL
Sbjct: 347 NDDFNTPEAYSALF-DMVREIN---------RLKSEDMAAANAM---ASELRRLAGVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
L P A+ + Q +D +E+V + LI++R ARK K+++ +D R +LT
Sbjct: 394 LEQDPEAFLQGSAQGED---------DEEVAKIEALIKQRNDARKTKEWALADAARDELT 444
Query: 493 RKGIALMDMGKETIWR 508
GI L D + TIWR
Sbjct: 445 SMGIVLEDGAQGTIWR 460
>gi|388257084|ref|ZP_10134264.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
gi|387939288|gb|EIK45839.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
Length = 466
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/492 (43%), Positives = 292/492 (59%), Gaps = 33/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE+F PI PGK+ MYVCG+T YD H+GHAR V+FD++ ++L +V
Sbjct: 2 LQIYNTLTRQKEIFKPIYPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGWDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRN TD+DDKII+RAN+ GE +L+ R+ D A L P +PR + +++QI
Sbjct: 62 SYVRNITDIDDKIIKRANENGEEFSALTKRFIDYMHEDEARLGIARPDIEPRATAYIDQI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DM +I+ AY + GDV++ V + +YG+L+ + ++ G R+ VD K +P DF
Sbjct: 122 VDMNKTLIDKGFAYAAINGDVYYRVTRFADYGKLTNKNVDELLVGARIEVDEVKEDPRDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWKSPWGNGRPGWHIECSAMSKNCCGETFDIHGGGPDLPFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V + EKMSKSLGNFFTIR + E+YHP +R L+S+HYRSP
Sbjct: 242 SEAANGCKYVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLEKYHPEVVRFLLVSSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NY+ L A + Y L+D L P TA A F M
Sbjct: 302 INYAEDNLIEARTGLERFYGALRDYADVL-PTSLTAMTASPYYTA----------FVEAM 350
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L G F D ++ +N++ K P + + ++K + ILG+
Sbjct: 351 NDDFNTRVALAGMF-DLVRDLNNA-----KSNP--------DLACDLAGQLKALGLILGV 396
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L EV Q A ++ ++V +LI ER A+K+K ++++D+IR +L G+
Sbjct: 397 LQEN--PEVFLQ----AGGSDQIAADNVERLIAERIQAKKDKQYARADEIRKELLAAGVV 450
Query: 498 LMDMGKETI-WR 508
L D T WR
Sbjct: 451 LEDARDGTTQWR 462
>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 289/492 (58%), Gaps = 27/492 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++TQ+KE F PI GKV MY CG T Y+ H+G+AR + FD+L R+LE++ +V
Sbjct: 1 MKLYNTLTQKKEAFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII R+ + G ++++Y EY D L PRVSDHM +I
Sbjct: 61 KFVQNFTDVDDKIINRSIEEGITAAEVADKYIAEYFKDADALGIRRADVHPRVSDHMPEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI ++ AY V+G+V++ V+ +YG+LS Q +++ ++G R+ V+ KR+P DFA
Sbjct: 121 IEMIKELEARGLAYNVDGNVYYQVDHFHDYGKLSKQSIDDLKSGARIDVNDEKRSPLDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIAQS
Sbjct: 181 LWKKKKDGEPYWESPWGQGRPGWHIECSAMSRKHLGESIDIHGGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+C +YW+HNG++ NNEKMSKS GNFFT+R I + Y +R F++ AHYRSP+
Sbjct: 241 EGSCGCKFANYWVHNGYININNEKMSKSKGNFFTVRDIAKHYDLEVVRMFMLMAHYRSPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L A +A+ +Y E L + + D + + + F M+
Sbjct: 301 NFSDELLGQAQNALERLYNAKYQMEYLLENNKSEA-ASEDEKTWMDNLAQYKKGFIDAMN 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DDLNT+ + F+ ++ NS+L+ ++ + L L KE+ ++GL
Sbjct: 360 DDLNTADAIAAIFE-LVRDTNSNLSEASSREAVKAALDLF----------KELTGVIGL- 407
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
A ++ E +V LI +R ARKNKDFS +D+IR L KGI L
Sbjct: 408 --------------AAKEKETDLEAEVEALIAQRQEARKNKDFSLADEIRDALLAKGIIL 453
Query: 499 MDMGKETIWRPC 510
D + W+
Sbjct: 454 EDTREGVKWKKA 465
>gi|386727442|ref|YP_006193768.1| cysteinyl-tRNA synthetase [Paenibacillus mucilaginosus K02]
gi|384094567|gb|AFH66003.1| cysteinyl-tRNA synthetase [Paenibacillus mucilaginosus K02]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/493 (41%), Positives = 285/493 (57%), Gaps = 31/493 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TLKIYN+M++ KE F P+ PGKV MYVCG T YD H+G+AR + FD++ RYLE +
Sbjct: 1 MTLKIYNTMSRTKEEFRPLDPGKVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLESVGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+IR+A+D+G +++ + Q+Y D L T PRV+ +M
Sbjct: 61 EVNYVVNFTDVDDKLIRKASDMGMTVPEVADLFVQKYYEDTKGLGVREATLHPRVTQNMT 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + I+ + AY GDV+F P YG+LS Q LE + G RV VD RK NP D
Sbjct: 121 EIIEFISGLEEKGLAYEAGGDVYFRTRSFPEYGKLSHQNLEELQYGIRVDVDERKENPQD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE SW SPWG GRPGWHIECSAM +L DIHGGG DL FPHHE EIA
Sbjct: 181 FVLWKAAKPGEISWSSPWGEGRPGWHIECSAMVRKFLGDTIDIHGGGQDLAFPHHECEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS + +YWMHNG V NNEKMSKSLGN + ++ E +R+F++S HYR+
Sbjct: 241 QSEGMTGHAMANYWMHNGFVNINNEKMSKSLGNGINVNRLLESIPSQVIRYFMLSGHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLN+S ++ A ++ L++C L + + ++++F A+
Sbjct: 301 PLNFSDEAVEQAKGSL----ARLENCIAGLKHRLQSAAEGDAEEEVSAAVQAVKEQFEAK 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS-LIESLRKIENEVKEVLRIL 435
M+DD NT +T F+ +N + ++ + L L+E ++ +L
Sbjct: 357 MNDDFNTPDAITAMFE----LVNFANPYAARESVRTASLQLLLEQFAAMDG-------VL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+L P +D+ L ++++ QLI ER ARK+K+++++D+IR LT +G
Sbjct: 406 GILTP----------EDEG-----LLDDEIEQLIIERTEARKSKNWARADEIRDLLTARG 450
Query: 496 IALMDMGKETIWR 508
I L D + WR
Sbjct: 451 ILLEDTAQGIRWR 463
>gi|448240905|ref|YP_007404958.1| cysteinyl-tRNA synthetase [Serratia marcescens WW4]
gi|445211269|gb|AGE16939.1| cysteinyl-tRNA synthetase [Serratia marcescens WW4]
Length = 461
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 279/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENHETCDQLTERMLAEMHADFDALLIDRPDQEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF
Sbjct: 122 IEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + +P AR F M
Sbjct: 302 LNYSEENLKQARTALERLYTALRGTDADAAPAGGEAFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKSED--------MAAANGMAAELRKLAKVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q+ D + E LI++R AR KD++ +D R L
Sbjct: 394 LQQEPEQFLQGGAQVDDGEVAEIE-------ALIKQRNEARAAKDWALADAARDRLNEMN 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|442611662|ref|ZP_21026368.1| Cysteinyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747590|emb|CCQ12430.1| Cysteinyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 459
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/494 (44%), Positives = 287/494 (58%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+ PGKV MYVCG+T YD H+GHAR VSFD++ RYL HL +V
Sbjct: 2 LQIYNTLTRQKEEFKPLTPGKVDMYVCGITIYDYCHVGHARTYVSFDVMNRYLRHLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RAN+ E L+ R + D A L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRANENNEAINDLTVRMTKAMHDDFAALNMLPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV + GDV F V +YG+LS Q LE +AG RV V K +P DF
Sbjct: 122 IVMVERLIEKGHAYVAKNGDVLFDVSTFTDYGKLSQQDLEMLQAGARVEVVQDKEDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKPSEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R + + + +R+FLI+ HYRS
Sbjct: 242 SCCANHGQYVNTWIHTGMVQVNKEKMSKSLGNFFTLRDVLKEFDAETVRYFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI-NKLRDEFHAR 376
LNYS L+ A V IY L+ + P A D + N F A
Sbjct: 302 LNYSHENLEQARATVERIYTALRG----------------VKPVAVDLLSNDYVARFEAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT L F+ + +N LK+ +P + K+ + ++ +LG
Sbjct: 346 MNDDFNTPEALPVIFE-----LAKEVNRLKEAEPLEAG--------KLAYVLVQLAGVLG 392
Query: 437 LL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+ P A+ + Q + A A LIE+R AAR++KD++ +D R LT
Sbjct: 393 IAQRDPEAFFQGGQDSDEVAKIEA---------LIEQRKAARESKDWAAADAARDALTAM 443
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 444 GVVLEDSAGKTTWR 457
>gi|385329332|ref|YP_005883635.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 699
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 282/505 (55%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 579
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 580 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 624
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 625 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 672
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 673 SDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|385325019|ref|YP_005879458.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
Length = 473
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 288/505 (57%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ A + +N + N +
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------Q 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 392 LAGRLKALGGIIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|429744209|ref|ZP_19277714.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
gi|429163425|gb|EKY05652.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
Length = 473
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/507 (42%), Positives = 285/507 (56%), Gaps = 54/507 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ D L L P +P+ ++++ ++
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGDLTARFIAAMHEDADALGVLRPDLEPKATENIAEM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I D AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 122 IAMIENLIARDKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSEKLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y
Sbjct: 242 SVGASGHACGHDHAVTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYD 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y L+ A E+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKHTPPAEFALSENA-------- 353
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
N F+A M+DD T + F+ L + K Q L L
Sbjct: 354 -----NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTQSAELAGCL 396
Query: 422 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ + I+GLL + + L+ A+ L+ E+V LI +R AR +K++
Sbjct: 397 KALGG-------IIGLLQ----RDPTEFLQGGAVADG-LSNEEVEALIAQRKQARADKNW 444
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR LT + I L D T WR
Sbjct: 445 AESDRIRDLLTAQNIILEDGAGGTSWR 471
>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
Length = 460
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/492 (44%), Positives = 290/492 (58%), Gaps = 37/492 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE FTP+V GKV MYVCGVT YD H+GH R V+FD + RYL ++
Sbjct: 2 LKIYNTLSKQKEEFTPLVAGKVSMYVCGVTIYDNCHIGHGRTFVAFDSVVRYLRFKGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
++RN TDVDDKII+RAN+ E+ +L+ R+ + D L L P +PRV++HM +
Sbjct: 62 NFIRNITDVDDKIIKRANENNESCDALTARFTKAMHRDFDALNILRPDLEPRVTEHMPDV 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV GDV F+V YG+LSGQ L+ +AG RV V+ K +P DF
Sbjct: 122 IAMIKTLIEKQHAYVASNGDVLFSVSSFDGYGKLSGQNLDMLQAGARVDVEESKHDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAMS +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGAGRPGWHIECSAMSFKHLGPIFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + + WMH+G V + KMSKSL NFFTI+ + E Y ++R+FLIS HYRS
Sbjct: 242 SCCAHDATYANTWMHSGMVQVDKVKMSKSLNNFFTIKDVLEAYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+D +++ +P A+D N F M
Sbjct: 302 LNYSEDNLKQARASLERLYTALRDVDISDAPI------------AKD--NSHYQAFCKAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ A K +N + K P +L+L+ LR + N +LGL
Sbjct: 348 DDDFNTPEALAVLFELA-KALNKAKLSADKSAP---ELALL--LRTLGN-------VLGL 394
Query: 438 LPPGAYSEVLQQLKDKA-LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L A + LQ + A +++ EL LI++R AR NKD++ +D RA L+ I
Sbjct: 395 LDQSA-DDFLQGDESSAEVEKIEL-------LIKQRNDARANKDWASADDARAQLSALNI 446
Query: 497 ALMDMGKETIWR 508
L D T WR
Sbjct: 447 VLEDGANGTTWR 458
>gi|433476514|ref|ZP_20433845.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|433516605|ref|ZP_20473363.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|433518715|ref|ZP_20475449.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|433524927|ref|ZP_20481579.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|433529189|ref|ZP_20485794.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|433531364|ref|ZP_20487941.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|433533398|ref|ZP_20489954.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|433535558|ref|ZP_20492083.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
gi|432207372|gb|ELK63362.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|432250791|gb|ELL06171.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|432250876|gb|ELL06253.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|432257429|gb|ELL12729.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|432263543|gb|ELL18760.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|432263814|gb|ELL19025.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|432264712|gb|ELL19911.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|432269148|gb|ELL24311.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
Length = 473
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/505 (42%), Positives = 287/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ + +N Q
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ-------------- 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++
Sbjct: 392 LAGRLKALGGIIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|342216509|ref|ZP_08709156.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587399|gb|EGS30799.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 461
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 294/493 (59%), Gaps = 37/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE F P+ V MY CG T Y+ H+G+AR V FD L RY + +V
Sbjct: 1 MKLYNTLTRKKEEFEPLQDKHVRMYNCGPTVYNYIHVGNARPMVVFDSLRRYFIYKGWDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQ 137
+V NFTD+DDKII++AN+ G ++ RY +E+ D L T PR +++M++
Sbjct: 61 DFVVNFTDIDDKIIKKANEEGLETKEIAERYIEEFKKDAQGLNLYEYKTINPRATEYMDE 120
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I I +++ AY ++GDV+F + K+ +YG+LSG+ L+ ++G R+ V+ +K+NP DF
Sbjct: 121 IIHFIKDLVDKGAAYELDGDVYFDITKAKDYGKLSGKNLDELQSGARIDVNEKKKNPGDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK K GEP+W+SPW GRPGWHIECS M+ L DIH GG DL FPHHENEIAQ
Sbjct: 181 ALWKKKKEGEPAWESPWSQGRPGWHIECSVMAKTLLGKTIDIHTGGEDLEFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A +W+HNG +T ++EKMSKS GNFFT+R I++ Y LR FLIS+HYRSP
Sbjct: 241 SEAHNGQDFARFWLHNGMITVDHEKMSKSKGNFFTVRDISKEYDLEVLRLFLISSHYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR--INPAAEDCINKLRDEFHA 375
+N+S +D A+ +Y T E AL K A+ +P + I +L++EF
Sbjct: 301 INFSKEVMDQNKHALERLYNTKDRLEGAL-------KAAKPGSDPNFDQDIQRLKEEFCQ 353
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD+NT+ L+ F D K IN +N +++ L ESL+ + + ++L
Sbjct: 354 AMEDDMNTADALSKLF-DLSKRINQGIN---------EEIGL-ESLKGAQESYLSLAKVL 402
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL K + EE+VL+LI+ER ARKNKDF+++D +R L G
Sbjct: 403 GLL----------------YKEEDQAEEEVLKLIKEREEARKNKDFARADALRDQLLEMG 446
Query: 496 IALMDMGKETIWR 508
IA+ D T W+
Sbjct: 447 IAIEDSRDGTKWK 459
>gi|385341075|ref|YP_005894946.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|416175060|ref|ZP_11609368.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|416189388|ref|ZP_11615301.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|433489259|ref|ZP_20446405.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|432220189|gb|ELK76014.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
Length = 473
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + ++ L+ A L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPIEFLQGGAASDG-LSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|387120512|ref|YP_006286395.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415765542|ref|ZP_11482787.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416040248|ref|ZP_11574423.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347993896|gb|EGY35223.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348653831|gb|EGY69504.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875004|gb|AFI86563.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 469
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E +V + LI++R AR KD++ +D R LT+
Sbjct: 404 L----------QLDPEQFLQAGSDEGEVAKIEALIKQRNEARTAKDWAAADAARNALTKM 453
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 GIILEDGPNGTTWR 467
>gi|167765721|ref|ZP_02437774.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
gi|167712594|gb|EDS23173.1| cysteine--tRNA ligase [Clostridium sp. SS2/1]
gi|291559857|emb|CBL38657.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
Length = 467
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/492 (41%), Positives = 288/492 (58%), Gaps = 31/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+QKE F P+ PGKVGMYVCG T Y+ H+G+AR + FD + RY E+ EV
Sbjct: 1 MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++AN+ G ++ RY +E DM L P T+QPR ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKKANEEGVTATEIAERYIKECKQDMEALNIKPATHQPRATEEIGGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
MI +I AY V+G V+F +YG+LS + +++ AG R V + K +P
Sbjct: 121 IKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTGEEGKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GE +WDSPWG GRPGWHIECS MS Y+ DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + +YWMHNG + NN+KMSKS GNFFT+R+I E+Y +R F++SAHYR
Sbjct: 241 AQSEACNGEKFANYWMHNGFLNINNKKMSKSAGNFFTVREIGEKYPLQVIRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+PLN+S ++SA + I + C +S +E G ++ I L +F
Sbjct: 301 TPLNFSDTLVESAKTGLDRILTAIDLCR-EMSAKEETGSLSKEETEHFANIEVLVKKFED 359
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ ++ NS++ K KI ++++ +L
Sbjct: 360 AMEDDFNTADAVSAIFE-IVRESNSTVKDFSADYAK-----------KILKVLEDLCSVL 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+ + K E+ +E++ +LIEER AARKNKDF+++D+IR L +G
Sbjct: 408 GI---------------ETTKEEEILDEEIEKLIEERQAARKNKDFARADEIRDQLLEQG 452
Query: 496 IALMDMGKETIW 507
I L D + W
Sbjct: 453 IVLKDTREGVKW 464
>gi|242398167|ref|YP_002993591.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|242264560|gb|ACS89242.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 468
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/488 (42%), Positives = 281/488 (57%), Gaps = 28/488 (5%)
Query: 25 MTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNF 84
MT+QKE F P+ ++ MYVCG T YD +HLGHAR ++FD++ RYLEH V V NF
Sbjct: 1 MTKQKEEFKPLRDDEIRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYTVLMVMNF 60
Query: 85 TDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQ 144
TD+DDKIIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++ I + + +
Sbjct: 61 TDIDDKIIRRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDIIEFVRK 120
Query: 145 IINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAK 204
+ AY V+F V K YG+LS LE+ R G RV K+NP DFALWK AK
Sbjct: 121 LEEKGYAYGSSDGVYFEVRKYEKYGKLSKVNLEDLRKGVRVEPGEGKKNPEDFALWKKAK 180
Query: 205 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD 264
GEP W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+ A
Sbjct: 181 PGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEACTGK 240
Query: 265 SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 324
V YW H G V + EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL+Y+
Sbjct: 241 EWVKYWFHTGFVMVSGEKMSKSLGNFVTIRELLQRYSPEVIRFFVLQKHYRSPLDYTEEG 300
Query: 325 LDSASDAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLRDEFHARMSDD 380
+ A + + +Y T+++ +A+ PF+ + + D KL + M DD
Sbjct: 301 IQHAKNNLERLYNTIENIRIAMEKVEVPFKWEKEEFELYETIRDAKKKL----YEAMDDD 356
Query: 381 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 440
NT+ + F+ A +N+ L ++K PK+ L +I +EV
Sbjct: 357 FNTAEAMKPIFEVA-NAVNAYLTKVEK--PKESVLRKALEFFRIISEV-----------F 402
Query: 441 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 500
G + E ++ K+ + +V R+A RK K+F +D+IRA L GI L D
Sbjct: 403 GIFEEYFKEAKETKEEELIELLIEV------RSALRKQKNFELADKIRAQLRELGIQLED 456
Query: 501 MGKETIWR 508
+ TIW+
Sbjct: 457 TPQGTIWK 464
>gi|384177995|ref|YP_005563757.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324324079|gb|ADY19339.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 465
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +I++ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIQAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
Length = 473
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKESFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPATAFELSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL + + L+ A+ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|52078589|ref|YP_077380.1| cysteinyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404487458|ref|YP_006711564.1| cysteinyl-tRNA ligase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|61216165|sp|Q65PC8.1|SYC_BACLD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52001800|gb|AAU21742.1| cysteinyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346452|gb|AAU39086.1| cysteinyl-tRNA ligase CysS [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 467
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/496 (41%), Positives = 286/496 (57%), Gaps = 37/496 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL +YN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + +YLE+
Sbjct: 1 MTLTLYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+I+ AN+LGE ++ R+ + Y D+ L C PRV+++M+
Sbjct: 61 EVQYVSNFTDVDDKLIKAANELGEEVPVIAERFIKAYFEDVGSLGCTKADCHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I D I +I+ AY +GDV++ YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 EIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK E SWDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YW+HNG++ +NEKMSKSLGNF + I + + P LR F++S HYR
Sbjct: 241 QSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKEHDPQVLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKL---RDE 372
P+NYSV L++ +A + A S Q K++ + + + K+ R
Sbjct: 301 PINYSVELLENTKNA-------FGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIEEQRKA 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT++ ++ F D K N L Q K +I++ ++ E+
Sbjct: 354 FQTAMDDDFNTANAISVLF-DLAKHANYYL------QEKNTAEHVIQAFIQL---FDEIC 403
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LG +LK EL ++D+ +LIE+R AR+N+DF+ SDQIR L
Sbjct: 404 SVLGF----------------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQIRDQLK 447
Query: 493 RKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 448 SMNIILEDTPQGTRWK 463
>gi|289548117|ref|YP_003473105.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181734|gb|ADC88978.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 490
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 297/494 (60%), Gaps = 8/494 (1%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L++YN++T + E F P+ P +V +Y CGVT YD SH+GH R+ + FD+L RYLE+L
Sbjct: 1 MSLRLYNTLTGRVEEFVPLNPPQVLIYTCGVTVYDDSHVGHGRSLIVFDVLRRYLEYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +VRNFTDVDDKII +A + + ++++NRY Y DM + P +PRV++H++
Sbjct: 61 RVKFVRNFTDVDDKIINKAREECTHFMTVANRYIASYYRDMEAIGVRPADVEPRVTEHIQ 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +I +I+ AYV GDV+F+V+ P YG+LS + E AG RV +KR+P D
Sbjct: 121 EIIQLIQGLIDKGYAYVSGGDVYFSVKAFPEYGKLSRRNPEELEAGARVEPSEKKRDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAKAGEP+WDSPWGPGRPGWH EC AM +L + DIHGGG+DL+FPHHENEIA
Sbjct: 181 FALWKAAKAGEPAWDSPWGPGRPGWHTECVAMIFKHLGTTIDIHGGGLDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YW+HNG VT +KMSKSLGN+ T+R++ RYHP LR ++ HYRS
Sbjct: 241 QAEALTGRPFARYWVHNGLVTVGGQKMSKSLGNYVTLREVYSRYHPDVLRLLVLMTHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRDEFHA 375
PL++S +++ + + + D E+ P +E R D I ++F A
Sbjct: 301 PLDFSWDKMEETKRSYERLKNAITDAELLKELPSEE----VREKHPLLDKIRDAEEKFFA 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
++DD NT L F + +L++++ K +L + + E +K + I
Sbjct: 357 DLADDFNTPSALGRLFTLVSEMGKLKKEVLERRRVKTSELDAYQ--QASETLLKHLRGIF 414
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRK 494
GL ++++ +K ++ + +E +++ LIE R+ AR+ K ++ +D IR L
Sbjct: 415 GLFEDLYPVCSVRRVVEKEMEAGHVLDERLIELLIEVRSKARQEKAYAIADLIRDRLREL 474
Query: 495 GIALMDMGKETIWR 508
GI L D T W+
Sbjct: 475 GIILEDTPAGTKWK 488
>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
gi|109894893|sp|Q47XL5.1|SYC_COLP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
Length = 469
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/503 (43%), Positives = 277/503 (55%), Gaps = 50/503 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++QKE FTPI GKVG+YVCG T YDL H+GH R +SFD + RYL +V
Sbjct: 2 LQIYNTLSRQKETFTPINAGKVGLYVCGCTVYDLCHIGHGRTYISFDNIARYLRFSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDV+DKII RAN+ E +L+ R D L P +PRV+ HM +I
Sbjct: 62 NYVRNITDVEDKIINRANENNETTEALTERTIAAMHQDFDSLNMARPDLEPRVTTHMNEI 121
Query: 139 KDMITQIINNDCAYVV--------EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR 190
MI ++ + AYV +GDV F V +YG+LSGQ LE ++G RV VD
Sbjct: 122 IAMIETLVTKEHAYVAGANAASTGQGDVLFDVSSYNDYGKLSGQNLEQLQSGSRVEVDQN 181
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K NP DF LWK+AK GEPSW SPWG GRPGWHIECSAM+A L FDIHGGG DL FPH
Sbjct: 182 KNNPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHGGGSDLTFPH 241
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
HENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR + +Y +R FL
Sbjct: 242 HENEIAQSCCALNTPYVNYWMHTGMVQVDQEKMSKSLGNFFTIRDVLAQYDAETVRFFLT 301
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK-- 368
+ HYRS LNYS L A +V IY +L+D +N ++ INK
Sbjct: 302 TGHYRSQLNYSTDNLTQARASVERIYTSLRD----------------VNIESDYVINKDS 345
Query: 369 -LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
+F M DD NT L F+ I+ LN+ K + L +L +
Sbjct: 346 SFVKQFCQAMDDDFNTPQALAVLFE-----ISKELNVAKAAANNALAIDLASTLVALG-- 398
Query: 428 VKEVLRILGL--LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 485
I+GL L P A+ + + A+ A LI +R AR +KD++ +D
Sbjct: 399 -----EIVGLLQLDPAAFLQGDNDNDEVAIIEA---------LIVQRNQARIDKDWAMAD 444
Query: 486 QIRADLTRKGIALMDMGKETIWR 508
R L I L D +T WR
Sbjct: 445 DARDKLNAMNIVLEDSAGKTTWR 467
>gi|163938097|ref|YP_001642981.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|423370672|ref|ZP_17348077.1| cysteinyl-tRNA synthetase [Bacillus cereus VD142]
gi|423473115|ref|ZP_17449857.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|423485389|ref|ZP_17462071.1| cysteinyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|423491114|ref|ZP_17467758.1| cysteinyl-tRNA synthetase [Bacillus cereus CER057]
gi|423502090|ref|ZP_17478707.1| cysteinyl-tRNA synthetase [Bacillus cereus CER074]
gi|423514646|ref|ZP_17491153.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-1]
gi|423514942|ref|ZP_17491423.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|423602381|ref|ZP_17578381.1| cysteinyl-tRNA synthetase [Bacillus cereus VD078]
gi|423665397|ref|ZP_17640536.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM022]
gi|423672657|ref|ZP_17647596.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM062]
gi|229558616|sp|A9VNA2.1|SYC_BACWK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|163860294|gb|ABY41353.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|401073408|gb|EJP81830.1| cysteinyl-tRNA synthetase [Bacillus cereus VD142]
gi|401151484|gb|EJQ58935.1| cysteinyl-tRNA synthetase [Bacillus cereus CER074]
gi|401162039|gb|EJQ69398.1| cysteinyl-tRNA synthetase [Bacillus cereus CER057]
gi|401168443|gb|EJQ75706.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|401225920|gb|EJR32464.1| cysteinyl-tRNA synthetase [Bacillus cereus VD078]
gi|401290304|gb|EJR95999.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM022]
gi|401311517|gb|EJS16812.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM062]
gi|402426613|gb|EJV58734.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|402441580|gb|EJV73530.1| cysteinyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|402442046|gb|EJV73990.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-1]
Length = 465
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--MEKFQVAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFS 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R AR+N+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKG 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 483
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/507 (42%), Positives = 286/507 (56%), Gaps = 54/507 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 12 LNLYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLCECGYPL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 72 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 131
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 132 IAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 192 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 251
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 252 SVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 311
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 312 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFELSENA-------- 363
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
N F+A M+DD T + F+ L + K L L
Sbjct: 364 -----NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAYLAGCL 406
Query: 422 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ + I+GLL + + L+ A+ L+ E++ LI +R AR +K++
Sbjct: 407 KALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIAQRKQARSDKNW 454
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR L I L D T WR
Sbjct: 455 AESDRIRDLLNEHKIILEDNAGGTTWR 481
>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
gi|81311142|sp|Q5F5D6.1|SYC_NEIG1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 473
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 284/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL ++ L+ A+ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQ----RNPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDSAGGTTWR 471
>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 494
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/507 (42%), Positives = 285/507 (56%), Gaps = 54/507 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 23 LNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 82
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ D L L P +P+ ++++ Q+
Sbjct: 83 TYVRNITDIDDKIIARAAENGETIGELTARFIAAMHEDADALGVLRPDLEPKATENIPQM 142
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY GDV++AV + P YG+LSG+ L++ RAGERV VD KR+P DF
Sbjct: 143 IAMIESLIQKGKAYPAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGFKRDPLDF 202
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 203 VLWKAAKAGEPAWESPWGQGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 262
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y
Sbjct: 263 SVGASGHTCGHDHTLTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYD 322
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y L++ A A
Sbjct: 323 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALARLYTALKNTPPA-------------GFA 369
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
+ N F+A M+DD T + F+ L + K + +L L
Sbjct: 370 LSETANNYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTRDAALSGCL 417
Query: 422 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ + I+GLL +E LQ L+ E++ LI R AR +K++
Sbjct: 418 KALGG-------IIGLLQRDP-TEFLQ----GGTASDGLSNEEIENLIAMRKQARADKNW 465
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR LT + I L D T WR
Sbjct: 466 AESDRIRDLLTAQNIILEDSAGITTWR 492
>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385854125|ref|YP_005900639.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416198682|ref|ZP_11619049.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|433466065|ref|ZP_20423533.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|433491440|ref|ZP_20448549.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505933|ref|ZP_20462861.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|433508075|ref|ZP_20464969.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|433510233|ref|ZP_20467087.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|433512288|ref|ZP_20469096.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
gi|30316184|sp|Q9JXE6.1|SYC_NEIMB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|432200267|gb|ELK56364.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|432225192|gb|ELK80945.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|432238457|gb|ELK94023.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|432238657|gb|ELK94222.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|432244477|gb|ELK99965.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|432244649|gb|ELL00134.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
Length = 473
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 285/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ + +N Q
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ-------------- 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 392 LAGRLKALGGIIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|424060453|ref|ZP_17797944.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|404668405|gb|EKB36314.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
Length = 473
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|317497616|ref|ZP_07955934.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895175|gb|EFV17339.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 467
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/492 (41%), Positives = 290/492 (58%), Gaps = 31/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+QKE F P+ PGKVGMYVCG T Y+ H+G+AR + FD + RY E+ EV
Sbjct: 1 MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++AN+ G ++ RY +E DM L P T+QPR ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKKANEEGVTATEIAERYIKECKQDMEALNIKPATHQPRATEEIGGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
MI +I AY V+G V+F +YG+LS + +++ AG R V + K++P
Sbjct: 121 IKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTGEEGKKDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GE +WDSPWG GRPGWHIECS MS Y+ DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + +YWMHNG + NN+KMSKS GNFFT+R+I E+Y +R F++SAHYR
Sbjct: 241 AQSEACNGEKFANYWMHNGFLNINNKKMSKSAGNFFTVREIGEKYPLQVIRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+PLN+S ++SA + I + C ++ +E G ++ I L +F
Sbjct: 301 TPLNFSDTLVESAKTGLDRILTAIDLCR-EMAAKEETGSLSKEETEHFANIEVLVKKFED 359
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ ++++ + S + +KI ++++ +L
Sbjct: 360 AMEDDFNTADAVSAIFE-----------IVRESNSTVKDFSA-DYAKKILKVLEDLCSVL 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+ + K E+ +E++ +LIEER AARKNKDF+++D+IR L +G
Sbjct: 408 GI---------------ETTKEEEILDEEIEKLIEERQAARKNKDFARADEIRDQLLEQG 452
Query: 496 IALMDMGKETIW 507
I L D + W
Sbjct: 453 IVLKDTREGVKW 464
>gi|421545409|ref|ZP_15991472.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|421547458|ref|ZP_15993493.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|421549491|ref|ZP_15995504.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|421551603|ref|ZP_15997590.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|421553643|ref|ZP_15999602.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|421567919|ref|ZP_16013650.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|433472311|ref|ZP_20429687.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|433478638|ref|ZP_20435944.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|433527099|ref|ZP_20483716.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|433539845|ref|ZP_20496309.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
gi|402320768|gb|EJU56249.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|402320956|gb|EJU56436.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|402323198|gb|EJU58644.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|402326610|gb|EJU62009.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|402327463|gb|EJU62851.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|402342864|gb|EJU78020.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|432206264|gb|ELK62273.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|432212918|gb|ELK68849.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|432257916|gb|ELL13208.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|432270890|gb|ELL26023.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
Length = 473
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 286/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ + +N Q
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ-------------- 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL +E LQ + L+ E++ LI R AR +K++++
Sbjct: 392 LAGRLKALGGIIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
Length = 466
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/498 (41%), Positives = 288/498 (57%), Gaps = 39/498 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+QKE F P+ K+ MYVCG T Y+ H+G+AR + FD Y+E+ EV
Sbjct: 1 MKIYNTLTRQKETFIPLEENKIKMYVCGPTVYNFFHIGNARPFMIFDAFRNYMEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII+RAN+ G +P+ ++ +Y EY D L T PRV++++E I
Sbjct: 61 TYVQNFTDVDDKIIKRANEEGISPIEVAEKYIAEYFKDADALGIKRATVHPRVTENIENI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +I+ AY + GDV+F + YG+LS Q LE G R+ V+ K++P DFA
Sbjct: 121 ITFIEDLISKGFAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDEKKHPIDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GE W SPWG GRPGWHIECS MSA YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAKKEGEIGWQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMHNG++ +N+KMSKSLGNFFT+R I + +R FL+SAHYR+P+
Sbjct: 241 EARSGKQFARYWMHNGYINVDNQKMSKSLGNFFTVRDILSEFSGQVIRFFLLSAHYRNPV 300
Query: 319 NYS---VLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDE 372
N+S +LQ + + L + + L H K ++N + + ++ L RD
Sbjct: 301 NFSKELILQAKAG-------MERLANSKERLVFTISHAK-GQMNESELELVSALENHRDR 352
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD+NT+ ++ F+ A +F N+++ + ++ LSL NE+ VL
Sbjct: 353 FIEAMDDDINTADAISIIFELA-RFSNTNVTENSSLEWAEKNLSLF-------NELTGVL 404
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
I+ KA E + +LI++R A+KNKDF+ +D IR +L
Sbjct: 405 NII-----------------KAEDTDSNDNEQIEKLIKDRVEAKKNKDFALADAIRDELK 447
Query: 493 RKGIALMDMGKETIWRPC 510
GI + D + T W+
Sbjct: 448 SMGIEIEDTRQGTKWKKV 465
>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 473
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/491 (41%), Positives = 300/491 (61%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ D A+L C+ P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + +Q+ ++ + + + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFK-------AYQQVYGQKTVDALEQSFVER----FNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q L +LR++ N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATVLYSTLRQLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ D+ LI++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDEFLKSDIGQDALA---LSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|427828191|ref|ZP_18995209.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 587
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 285/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 118 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 177
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 178 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 237
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 238 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 297
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 298 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 357
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 358 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 417
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 418 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 464
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ + +N Q
Sbjct: 465 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ-------------- 505
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 506 LAGRLKALGGIIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 560
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 561 SDRIRDLLNEHKIILEDNAGGTTWR 585
>gi|118442910|ref|YP_877177.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
gi|187629804|sp|A0PXS5.1|SYC_CLONN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118133366|gb|ABK60410.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
Length = 466
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 297/493 (60%), Gaps = 33/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N+MT+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I++AN+ L +R+ EY D L T PR +++M++I
Sbjct: 61 NFIQNFTDIDDKMIKKANEENITVKELGDRFIHEYYKDADGLNIKRATANPRATEYMDEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +I+ AY V GDV+F+ ++ YG+LSGQ L++ +AG R++VD RK++P DFA
Sbjct: 121 IQFVKDLIDKGYAYEVNGDVYFSTKQFKEYGKLSGQNLDDLQAGARISVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEPSW+ PWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS
Sbjct: 181 IWKSEKPGEPSWNCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMH+ ++ NN+KMSKSL NFFT R+I E+Y +R F++SAHYR+PL
Sbjct: 241 EARNGKTFANYWMHSAYLNINNKKMSKSLNNFFTTREILEKYDAEVIRLFMLSAHYRTPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L SA + +Y + + E L K ++ ++ + L ++++
Sbjct: 301 NFSDDLLQSAKASNERLYNAIGNLERLLDEV----KVDKVTENEKEYVKNLESYKEKYIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M DD NT+ ++ F D +K IN+++N K+ + L LI +E+ + L
Sbjct: 357 KMDDDFNTADAISVIF-DLVKDINTNINTESSKELVEYSLELI----------RELGKPL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+L ++ +++ +LIE+R ARK+KD++ +D+IR DL +G
Sbjct: 406 GILQKSTMLDLNAEIE---------------KLIEQRQQARKDKDWALADKIRDDLKARG 450
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 451 IVLEDTPQGVRWK 463
>gi|206978367|ref|ZP_03239240.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217957665|ref|YP_002336209.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|222093860|ref|YP_002527910.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|375282187|ref|YP_005102622.1| cysteinyl-tRNA synthetase [Bacillus cereus NC7401]
gi|423357619|ref|ZP_17335214.1| cysteinyl-tRNA synthetase [Bacillus cereus IS075]
gi|423376318|ref|ZP_17353632.1| cysteinyl-tRNA synthetase [Bacillus cereus AND1407]
gi|423572081|ref|ZP_17548295.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A12]
gi|226735048|sp|B7HQS4.1|SYC_BACC7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765178|sp|B9IZH4.1|SYC_BACCQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206743428|gb|EDZ54862.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217066370|gb|ACJ80620.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|221237908|gb|ACM10618.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|358350710|dbj|BAL15882.1| cysteinyl-tRNA synthetase [Bacillus cereus NC7401]
gi|401074485|gb|EJP82885.1| cysteinyl-tRNA synthetase [Bacillus cereus IS075]
gi|401088775|gb|EJP96957.1| cysteinyl-tRNA synthetase [Bacillus cereus AND1407]
gi|401198803|gb|EJR05716.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A12]
Length = 465
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + + K + F
Sbjct: 301 PINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD------LKKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ +I++ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---VVIQAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKD 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|386333865|ref|YP_006030036.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
gi|334196315|gb|AEG69500.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
Length = 465
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/502 (42%), Positives = 293/502 (58%), Gaps = 52/502 (10%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI PG+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE +L++R+ D L P ++PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV + P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLSMIGKLQANGLAYQAADGDVNYAVRRFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQ+ A + V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +H
Sbjct: 243 EIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQD--CEVALSP--FQEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D E P + HG+
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAEAGAQPDWSEPHGQ--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M+DD NT + F+ + S +N K + P + +++
Sbjct: 348 --RFREAMNDDFNTPVAMAVLFE-----LASEVN--KTRSP------------ALASQLA 386
Query: 430 EVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
+ ++GLL P A+ + L AE+ IE R A+ +DF+++D I
Sbjct: 387 ALGGVMGLLGRDPHAFLQGGVGAAADGLDTAEVEAR-----IEARRVAKAARDFARADGI 441
Query: 488 RADLTRKGIALMDM-GKETIWR 508
RADL GI L D G T WR
Sbjct: 442 RADLLAAGIVLEDKPGGVTEWR 463
>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452949314|gb|EME54782.1| cysteinyl-tRNA ligase [Acinetobacter baumannii MSP4-16]
Length = 473
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATMLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|168206821|ref|ZP_02632826.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170661739|gb|EDT14422.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
Length = 466
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 289/490 (58%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ PG+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+SA +V IY + + E + A + +NK ++++ +M
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ +T F D +K N+++ + K+ Q+ L LI R LG
Sbjct: 361 DDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELI--------------RELG-A 404
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P G + + + L EE + LI +R ARK++DF+ +D+IR +L +GI L
Sbjct: 405 PLGMFQKST---------KGNLAEE-IEALIAKRQQARKDRDFALADKIRDELKDRGIIL 454
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 455 EDTPQGVRWK 464
>gi|407713995|ref|YP_006834560.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
gi|407236179|gb|AFT86378.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
Length = 465
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/498 (44%), Positives = 292/498 (58%), Gaps = 44/498 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K+ F P+ G V MYVCG+T YD H+GHAR V FD++ R+L L +
Sbjct: 3 SLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ D L P +PR +D + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + N AY +GDV +AV K YG+LSG+ LE+ RAGERVA + K +P D
Sbjct: 123 MLGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK +KAGEP+ WDS +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKQSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS AA V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y +R F+ AH
Sbjct: 243 EIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + +D A +A+ +Y L D ++P + AA D F
Sbjct: 303 YRSPLNYSDVHIDDARNALGRLYTALTD----VAP----------DGAALDWNEAHAQRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M+DD NT ++ F+ L + + + +L LR +
Sbjct: 349 QAAMNDDFNTPVAVSVLFE------------LATEVNRTRDPALARQLRSLGA------- 389
Query: 434 ILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P AY LQQ A++ A L + I ER AA++ KD++ +D+IRA+L
Sbjct: 390 VLGLLGREPRAY---LQQAAGAAVEGA-LDPAAIEAKIAERVAAKQAKDYAAADRIRAEL 445
Query: 492 TRKGIALMDM-GKETIWR 508
G+AL D G T WR
Sbjct: 446 LEAGVALEDKPGGLTEWR 463
>gi|385337194|ref|YP_005891067.1| cysteinyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
meningitidis WUE 2594]
Length = 699
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/505 (42%), Positives = 287/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 576
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ + +N Q
Sbjct: 577 EAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ-------------- 617
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++
Sbjct: 618 LAGRLKALGGIIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAE 672
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 673 SDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|229558610|sp|B0VS71.1|SYC_ACIBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
Length = 473
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 297/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTMRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YW+H G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|238785350|ref|ZP_04629338.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
gi|238713741|gb|EEQ05765.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
Length = 461
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/495 (43%), Positives = 284/495 (57%), Gaps = 42/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENSETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I D AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELVERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + +P AR F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDANAAPAGGAEFEAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + I + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------IAAANGLAAELRKLAHVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEED----VLQLIEERAAARKNKDFSKSDQIRADLTR 493
L+Q + L+ T+ D + LI++R AR +KD++ +D R L
Sbjct: 394 ---------LEQDPELFLQSGAQTDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNE 444
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 445 LGIVLEDGPQGTTWR 459
>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 466
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 299/490 (61%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YNS+T+QKE F PIVPG+V MYVCG T Y+ H+G+ R + FD + RYLE+ +V
Sbjct: 1 MRLYNSLTRQKEEFVPIVPGEVKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTD+DDK+I +AN G L +++ EY D LQ T PR +++++++
Sbjct: 61 TFIQNFTDIDDKMINKANAEGITVKELGDKFIDEYYQDADGLQVKRATINPRATEYIDEV 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ + +I+ AY ++GDV+F+ +K YG+L GQ LE+ ++G R++VD RK++P DFA
Sbjct: 121 VEFVKDLIDRGFAYEIDGDVYFSTKKFEEYGKLCGQNLEDLQSGARISVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ L DIHGGG+DL FPHHENEIAQS
Sbjct: 181 VWKSQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHGGGMDLKFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +YWMH V +N+KMSKS NF T R+ ++Y+ +R ++S HYR+ +
Sbjct: 241 EAVTGQKFANYWMHAAFVNVDNKKMSKSENNFVTAREALKKYNSDVIRFLMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S LDSA +V +Y + + E ++ + A ++K R++F +M
Sbjct: 301 NFSAELLDSAKSSVERLYNCVNNLENLINEVNRK-EANDSEKAYLKSLDKHREKFIEKMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F D +K IN+++++ + + L+LI L
Sbjct: 360 DDFNTADGISVIF-DLIKDINNNVSIDSSSELCEGTLNLIREL----------------- 401
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
G+ +LQ+ ++K+L E ++ +LI++R ARKN+DF+ +D+IR DL + I L
Sbjct: 402 --GSPLGILQKTEEKSL------EVEIQELIDKRQEARKNRDFALADKIRDDLKARNIIL 453
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 454 EDTPQGVRWK 463
>gi|421617568|ref|ZP_16058556.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
gi|409780556|gb|EKN60185.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
Length = 461
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/497 (42%), Positives = 283/497 (56%), Gaps = 44/497 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++T+ KE F P+ KV MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 1 MALSIYNTLTKSKEAFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVITRWLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA++ GE +L R D A L L P +PR +DH+
Sbjct: 61 DVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDEARLNVLRPDLEPRATDHIA 120
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I AY GDV++ V K YG+LS +++E+ + G R+ VD K +P
Sbjct: 121 GMHAMIQTLIGKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSWDSPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 241 AQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ L Q G A + + F A
Sbjct: 301 SPINYSEESLKEAKGALERFYNGLK----GLPEAQAAGGEAFV------------ERFGA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N+ F+ + +N L++ S + + + +K++ +L
Sbjct: 345 AMDDDFNSPEACAVLFE-----MIREVNRLRE--------SDVPAAAGLAARLKQLAGVL 391
Query: 436 GLLPPGAYSEVLQQLKDKALKRA----ELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
G+L QL+ +A +A ++ +V LI R AR K++++SD+IR L
Sbjct: 392 GVL----------QLEPEAFLQAGAAGKVDAAEVEALIAARLTARVEKNWAESDRIRDQL 441
Query: 492 TRKGIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 442 AAMGVVLEDGKGGTTWR 458
>gi|417548036|ref|ZP_12199117.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417566287|ref|ZP_12217161.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395558043|gb|EJG24044.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400388335|gb|EJP51407.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 477
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/499 (41%), Positives = 293/499 (58%), Gaps = 37/499 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+ T+ KE F PIV ++ +YVCG+T YD H+GHAR ++FDL+ R+L +V
Sbjct: 4 LYVYNAETRSKEHFEPIVANEIKLYVCGITVYDYCHIGHARTMIAFDLIVRFLRSQGWKV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII +A D E+ L++R+ Q D L CL P +P+ +D ++ I
Sbjct: 64 KYIRNITDIDDKIIHKAQDNHESIGELTDRFIQAMHEDFQTLGCLSPDAEPKATDSIQDI 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPA 195
+ +I +I AY + GD++F++E P+YGRLSG++L + +AG +RV++++ K +P
Sbjct: 124 QRIIQTLIEKKYAYQIANGDIYFSIESYPDYGRLSGRKLADMQAGASQRVSLETEKHHPF 183
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKA+K EP W SPWG GRPGWHIECSAMS +L + FDIHGGG DLIFPHHENEI
Sbjct: 184 DFVLWKASKPNEPFWQSPWGNGRPGWHIECSAMSMCHLGNHFDIHGGGGDLIFPHHENEI 243
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + V+YW+H G + N EKMSKSLGNF TIR + YHP +R ++S+HYR
Sbjct: 244 AQSEAATGEKYVNYWLHTGFINVNGEKMSKSLGNFLTIRDAFKSYHPEVIRLLMMSSHYR 303
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+++S L + YQ + + ++ + KT E N +F+
Sbjct: 304 SPIDFSDHILKDTQKVLSRFYQAIYHAQPFIASKDDAIKT-------ELNSNPFIQKFNQ 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT L F D LK +N +L ES K+ + +L I
Sbjct: 357 AMNDDFNTPEALVICF-DLLKQLNIALKE--------------ESPEKVIKNYQLLLWIG 401
Query: 436 GLLPPGAYSEVLQQLKDKALKRAE------LTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+L + Q +K LK + L+E+++ + I R AR NK ++ +DQIR
Sbjct: 402 NIL------NIFQYDPEKILKHSASEQDSPLSEQEIQEAILARNTARSNKQYALADQIRQ 455
Query: 490 DLTRKGIALMDMGKETIWR 508
L + GI L D +TIWR
Sbjct: 456 KLLQSGILLEDTQTQTIWR 474
>gi|77360989|ref|YP_340564.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
gi|109894923|sp|Q3IF51.1|SYC_PSEHT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76875900|emb|CAI87121.1| cysteine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
Length = 459
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/497 (43%), Positives = 284/497 (57%), Gaps = 48/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ GE+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDVDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDVEPTVTAHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IEMVERLITKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ ++Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+ E + N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRGVEPVACELDD---------------NEYVIKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + LN++K +Q QL+ I
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNLVKDIDSQQAGQLAFI------------------ 383
Query: 437 LLPPGAYSEVL--QQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADL 491
G+ SEVL Q +A + +++V Q LI +R AR +K+++ +D+ R L
Sbjct: 384 ---LGSISEVLGVAQQDPEAFLQGGQDDDEVAQIEALIVKRNDARASKNWAAADEARDAL 440
Query: 492 TRKGIALMDMGKETIWR 508
+ G+ L D +T WR
Sbjct: 441 SALGVILEDSAGKTTWR 457
>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415770039|ref|ZP_11484654.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416108703|ref|ZP_11591198.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346355|ref|ZP_21154322.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348004228|gb|EGY44753.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348657072|gb|EGY74669.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443541696|gb|ELT52102.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 469
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E++V + LI++R +R KD++ +D R LT
Sbjct: 404 L----------QLDPEQFLQAGSDEDEVAKIEALIKQRNESRATKDWAAADAARNALTEM 453
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 GIILEDGPNGTTWR 467
>gi|428218169|ref|YP_007102634.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
gi|427989951|gb|AFY70206.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
Length = 485
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/487 (41%), Positives = 293/487 (60%), Gaps = 15/487 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++ ++YNS+T+QKE + PG++ MYVCGVT YD HLGHARA V +D++ RYL+
Sbjct: 1 MSQQVYNSLTRQKEELQTLEPGQIKMYVCGVTVYDFCHLGHARAYVVWDMVRRYLQSRNY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV+N TD+DDKI++RA G +S+RY Y DMA L +P PR ++ +E
Sbjct: 61 QVRYVQNITDIDDKILKRAQQEGVTMQEISDRYIATYNEDMARLNIMPADEYPRATESIE 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAV-DSRKRN 193
I D+I + D AY GDV++AV+K P YG+LSG++L + +AG RVAV + KR
Sbjct: 121 AIIDLIKALEAQDYAYAAGGDVYYAVQKFPTYGKLSGRKLADMQAGASGRVAVGEELKRY 180
Query: 194 PADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
P DFALWKAAK GEP W SPWG GRPGWHIECSAM L + DIH GG DL FPHHEN
Sbjct: 181 PFDFALWKAAKPGEPFWQSPWGEGRPGWHIECSAMVRSRLGDQIDIHAGGADLQFPHHEN 240
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A YW+HNG V + EKMSKSLGNF TIR++ + Y P+A+R F++ +H
Sbjct: 241 EIAQSEGATHQPLARYWLHNGFVNIDGEKMSKSLGNFTTIRELLKHYDPMAIRLFILQSH 300
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YR P++++ +++A+ ++T++D + F + R+ A + L D F
Sbjct: 301 YRQPIDFTEEAINAATRG----WETIRDGLLFKHDFGDQLGWDRLAVALDQLDQNLLDRF 356
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
H M DD NTS ++ F+ A K + + N L +++ + + + +VL
Sbjct: 357 HGAMDDDFNTSIAISLLFELA-KPLKAEANKLVHSGKSDLASAVLAQTWQTLSYLSDVLG 415
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+ P A S + + A ++++ + ++++R AARK KDF+ SD++R L
Sbjct: 416 FIA--DPEARSNA-----NHSNDSATVSDDQIETMVQQRCAARKAKDFAASDRLRDQLKE 468
Query: 494 KGIALMD 500
GI L+D
Sbjct: 469 LGITLID 475
>gi|290476082|ref|YP_003468980.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
gi|289175413|emb|CBJ82216.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
Length = 460
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 283/494 (57%), Gaps = 41/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ +L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRATENNESCDALTTRMLSEMHSDFDALNIQRPDSEPRATQHISEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++IN AYV + GDV F+++ +P+YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IQITEELINRGHAYVADNGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEIADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGVGRPGWHIECSAMNGKQLGQHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGPYVNYWMHSGMVMVDKEKMSKSLSNFFTIRDVLGYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+ + + P AR A M
Sbjct: 302 LNYTEENLKQARTALERLYTALRGTDKSAQPTGSEAFEARFTEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F I +N LK + E LRK+ ILGL
Sbjct: 347 NDDFNTPEAYSVLFD-----IAREINCLKTENLAAANGLAAE-LRKLAG-------ILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L+Q ++ L+ ++DV Q LI++R AR NK+++ +D R L
Sbjct: 394 ---------LEQEPEQFLQGGAHVDDDVAQIEALIKQRNDARTNKEWALADAARDQLNAM 444
Query: 495 GIALMDMGKETIWR 508
I L D + T WR
Sbjct: 445 RIELEDGPQGTTWR 458
>gi|225026000|ref|ZP_03715192.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
gi|224956650|gb|EEG37859.1| cysteine--tRNA ligase [Eubacterium hallii DSM 3353]
Length = 464
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/490 (41%), Positives = 283/490 (57%), Gaps = 28/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+QKE F P+ GKVGMYVCG T Y+ H+G+AR + FD + RY E+ +V
Sbjct: 1 MKLYNTLTKQKEEFVPVHEGKVGMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++AN+ G +S R+ E DM L P T+ P+ ++ ++ +
Sbjct: 61 NYVSNFTDVDDKIIKKANEEGVPASEISERFIAECKKDMEGLNIEPATHNPKATEEIDGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+ +I AY G V+F K NYG+LS + L++ RAG R+AV K + DF
Sbjct: 121 IAMISTLIEKGYAYEKNGTVYFRTRKFKNYGQLSKKNLDDMRAGIRIAVSDEKEDAMDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP+W SPWG GRPGWHIECS MS Y+ DIH GG DL+FPHHENEIAQS
Sbjct: 181 LWKPKKEGEPAWVSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YWMHN + +N+KMSKS GNFFT+R+I+E+Y +R F++SAHYRSPL
Sbjct: 241 EACNDEKFANYWMHNAFLNIDNKKMSKSAGNFFTVREISEKYPLQVIRFFMLSAHYRSPL 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S ++++ + + I + ++ E E+ N L+ ++ A M
Sbjct: 301 NFSDTLVEASKNGLERILTAIDHLREVIAAAPEGELNVEDQKNLEEA-NALKAKYEAAME 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ + F+ +K N + K QQ L +I L ILG++
Sbjct: 360 DDFNTADAIAAIFE-LVKLANVTAES-GSKAYAQQLLDIIVQL----------CDILGII 407
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
K+ EL ++D+ LIEER AARK K+F+++D+IR L KGI L
Sbjct: 408 TE---------------KKEELLDDDIEALIEERQAARKAKNFARADEIRDLLADKGIIL 452
Query: 499 MDMGKETIWR 508
D W+
Sbjct: 453 EDTRAGVKWK 462
>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 481
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/500 (41%), Positives = 301/500 (60%), Gaps = 29/500 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL+IYN++TQ+KE F P+ +V +Y CG T YD H+G+ARA + D+L RYLE+
Sbjct: 1 MTLQIYNTLTQKKEEFEPLDQDEVKLYSCGPTVYDYFHIGNARAFILPDILKRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +V NFTDVDDK+I+RAN+ L++R+ Y D L P+ ++H+
Sbjct: 61 NVLHVTNFTDVDDKMIKRANEEEIEIEELADRFITAYFEDTERLNIKQADVYPKATEHIS 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +++ ++ + AY V+GDVFFAV K +YG+LS Q LE +G RV V+ +K +P D
Sbjct: 121 DIIELVKKLEDKGYAYEVDGDVFFAVRKFADYGKLSNQELEELTSGSRVEVNDKKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +K GEPSW+SPWG GRPGWHIECSAMS YL +FD H GG+DL+FPHHENEIA
Sbjct: 181 FVLWKKSKEGEPSWESPWGTGRPGWHIECSAMSMCYLGEEFDFHTGGVDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A V+YW+HNG++ + EKMSKSLGNFFT R I + Y LR FLIS HYRS
Sbjct: 241 QNEAGVGSQVVNYWLHNGYINVDGEKMSKSLGNFFTTRDILQDYSAEVLRFFLISKHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL------- 369
P+N+S +LD+A+ ++ Q LQ+ L + + A + P ++ + +L
Sbjct: 301 PINFSDAELDNAAKSL----QRLQNTVNKLKDLLDRDR-ADLKPGNKEELQELEKKIKAK 355
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
R++F M DDLNT+ + GA + K +N +N + Q ++I L K + K
Sbjct: 356 REKFEEAMDDDLNTA-LAIGALHELAKELNIVVN---DADFELNQANII-VLEKAYDTFK 410
Query: 430 EV-LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 488
E+ ++LG+ L+ + LT + + L+E R AR+N+D+ +DQIR
Sbjct: 411 ELSQQVLGI-----------NLETEDDISDNLTSDLIGLLLEVRNKARQNQDWELADQIR 459
Query: 489 ADLTRKGIALMDMGKETIWR 508
+L+ GI L D + T W+
Sbjct: 460 DELSELGIILEDTPQGTDWK 479
>gi|421556545|ref|ZP_16002460.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
gi|402337218|gb|EJU72468.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
Length = 473
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 281/505 (55%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKA KAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKATKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|315649724|ref|ZP_07902808.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
gi|315274912|gb|EFU38288.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
Length = 468
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/492 (42%), Positives = 285/492 (57%), Gaps = 26/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++T+ KE F GKV +YVCG T YD H+G+AR + FD++ Y E+
Sbjct: 1 MALQIYNTLTRMKETFVAQESGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQGN 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V+YV NFTDVDDK+IR+A G +++++ Q Y D+ L T PRV+D+ME
Sbjct: 61 DVSYVVNFTDVDDKMIRKAEQTGTTVPEVADKFIQAYYEDLDGLGIPRATLNPRVTDNME 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++++ D AY GDVF+ K +YG+LS Q L+ + G R+ VD RK NP D
Sbjct: 121 NIIEFIQELVDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKRKENPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE W SPWG GRPGWHIECSAM+ YL DIHGGG DL FPHHE E+A
Sbjct: 181 FVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPHHECEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A +YWMHNG++ NNEKMSKSLGN ++++ E+Y A+R+F++S HYR+
Sbjct: 241 QSEALTGKPLANYWMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAVRYFMLSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNYS +D A ++V + + E LS K ++ I+ + EFH +
Sbjct: 301 PLNYSDEVMDQAQNSVERLANAAANIEHRLST-AIGSKDDEVSQEVAGKISAVLGEFHQK 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT +T FQ A S N L K+ L E LR NE+ VLRI+
Sbjct: 360 MQDDFNTPDAITAMFQWA-----SEANQL-LKEASIPAADLHEVLRAF-NEMNGVLRIVN 412
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+L +E++ LI ER ARKNK+++++D+IR L +GI
Sbjct: 413 ------------------TGTGDLLDEEIEALIAERIEARKNKNWARADEIRDKLADEGI 454
Query: 497 ALMDMGKETIWR 508
L D + WR
Sbjct: 455 VLEDTAQGMRWR 466
>gi|238898628|ref|YP_002924309.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259511836|sp|C4K6G8.1|SYC_HAMD5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229466387|gb|ACQ68161.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 461
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/491 (44%), Positives = 291/491 (59%), Gaps = 34/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+ ++KELFTPI P VGMYVCGVT YDL H+GHAR V FD++ RYL +L +
Sbjct: 2 LKIFNTFNRKKELFTPIHPNTVGMYVCGVTIYDLCHIGHARTFVVFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA+ ++ +L+ + +E D +L L P +PR ++H+ ++
Sbjct: 62 TYVRNITDIDDKIIQRASQNHQSCEALTAQMLKEMYRDFDELNLLRPDLEPRATEHITEM 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ Q+++ AYV GDV F+VEK+P+YG LS Q LE +AG RV V K +P DF
Sbjct: 122 ITLTQQLLDQKYAYVAANGDVLFSVEKNPHYGLLSRQNLEQLQAGARVEVMESKHHPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EP W SPWG GRPGWHIECSAM+A L FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKPNEPHWPSPWGEGRPGWHIECSAMNAKALGPHFDIHGGGADLMFPHHENEMAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH+G + N EKMSKSL NF TIR + +RY P LR+FL+SAHYRSP
Sbjct: 242 SICAHKAPYVNCWMHSGMIMINKEKMSKSLNNFCTIRDLLQRYDPETLRYFLLSAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y L+D F E G++ F + M
Sbjct: 302 LNYTEENLKQARIALTRLYTALRDTNQ--KAFPEGGES-------------FEKRFVSAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT F A +N LKK+ PK L LRK+ ++LGL
Sbjct: 347 NDDFNTPEAYAVLFDTA-----REINKLKKEHPKAAD-GLAAQLRKMG-------KVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L G+ +L KD + AE+ + LIE+R AR +K++ ++D R L G+
Sbjct: 394 LESGSLLSLLNPEKDDRHQSAEIAD-----LIEKRNLARAHKNWEEADNARTRLFEMGVV 448
Query: 498 LMDMGKETIWR 508
+ D T WR
Sbjct: 449 VEDTENGTNWR 459
>gi|291613145|ref|YP_003523302.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583257|gb|ADE10915.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
Length = 491
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/509 (43%), Positives = 293/509 (57%), Gaps = 40/509 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F PI+P V MYVCG+T YD HLGHAR V FD++YR+L+ +V
Sbjct: 2 LKIYNTLARDKQEFKPIIPNTVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + E+ +L+ R+ D L P ++PR + ++ Q+
Sbjct: 62 TYVRNITDIDDKIIKRAAENKESIHALTQRFIDAMHEDADTLGVQRPDHEPRATQYVPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ Q+ N AY +GDV +AV K YG+LSG+ LE+ RAGERV V S K +P DF
Sbjct: 122 LEMVAQLEQNGLAYQAADGDVNYAVRKFDGYGKLSGKSLEDLRAGERVEVVSDKHDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK AK GE WDS WG GRPGWH+ECSAM++ L + FDIHGGG DL FPHHENE
Sbjct: 182 VLWKHAKDGEADEVKWDSKWGKGRPGWHLECSAMASDILGNHFDIHGGGADLQFPHHENE 241
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ++Y +R F++ AHY
Sbjct: 242 IAQSEGAHRCQYVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFILRAHY 301
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVA--LSPFQE-------HGKTARINPAAEDC 365
RSPLNYS + LD A A+ +Y L+ + L P E G+ AR D
Sbjct: 302 RSPLNYSDVHLDDAKGALTRLYTALKSAPSSSILPPEGEGSEFPSPSGRGAR-GEGVIDW 360
Query: 366 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 425
F + M DD NT + F D +N S ++
Sbjct: 361 DTPHAARFKSAMDDDFNTPEAIAVLF-DLANEVNRSQSVTAAA----------------- 402
Query: 426 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE------DVLQLIEERAAARKNK 479
E+K + +LGLL + LQ L T E D+ LIE R AA+K+K
Sbjct: 403 -ELKTLAGVLGLLQRDP-QDFLQGRASMNLTVPTPTLEASGGALDIDALIEARIAAKKSK 460
Query: 480 DFSKSDQIRADLTRKGIALMDMGKETIWR 508
+F+++D+IR +L GI L D + T WR
Sbjct: 461 NFAEADRIRKELLGAGIVLEDTPQGTTWR 489
>gi|317131764|ref|YP_004091078.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
gi|315469743|gb|ADU26347.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
Length = 465
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/491 (41%), Positives = 291/491 (59%), Gaps = 32/491 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+KIYN++T++K+ F PI PG+ +Y CG T Y+ H+G+AR V FD+L RYLE+
Sbjct: 1 MTMKIYNTLTREKDEFVPIKPGEARIYACGPTVYNYIHVGNARPMVVFDILRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V + +NFTDVDDK+IRRAN+ G ++ +Y Y D A L T+ PR ++++
Sbjct: 61 KVLFAQNFTDVDDKMIRRANEEGVAVAEVAEKYIAAYREDAAGLHVREATFHPRATENIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I +I + AY +GDV+F YG+LS Q LE+ AG RV V RK +P D
Sbjct: 121 DILALIRTLEQKGYAYASDGDVYFRAHAFKEYGKLSHQPLEDLEAGARVDVSERKEDPVD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GEPSWDSPWGPGRPGWHIECSAM+ H+L DIH GG DLIFPHHENEIA
Sbjct: 181 FALWKAAKPGEPSWDSPWGPGRPGWHIECSAMARHFLGQTIDIHCGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ +N KMSKSLGNFFT+R++ +Y +R ++SA YR+
Sbjct: 241 QSECANDAPFAHYWMHNGYINIDNRKMSKSLGNFFTVREVAAKYGYEPIRFLMLSAQYRT 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S ++ + A+ +Y+ + + AL ++ G+T PA ++ +++F A
Sbjct: 301 PINFSDEIMEQSVAALDRLYRCREALKDAL---RQAGET----PADSAAVSAWQEKFDAA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DDLNT+ L F+ +K IN+ + + + + L+ +LG
Sbjct: 354 MDDDLNTADALAVLFE-LVKEINTRV---------AEGTAGADWLKGAAGLFGTFCDVLG 403
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L L + K++ L + +V LIE+R ARK KDF +D IR +L+ KGI
Sbjct: 404 L---------LYERKERTL------DAEVEVLIEKRRQARKAKDFKTADAIRDELSAKGI 448
Query: 497 ALMDMGKETIW 507
L D + W
Sbjct: 449 VLKDTPQGVKW 459
>gi|392423874|ref|YP_006464868.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
gi|391353837|gb|AFM39536.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
Length = 477
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/495 (41%), Positives = 293/495 (59%), Gaps = 24/495 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+++N+MT+QKE F GKV MYVCG T Y+ H G+AR V FD++ RY +
Sbjct: 1 MSLRLFNTMTRQKEEFKSRESGKVAMYVCGPTTYNFFHAGNARMFVVFDMIRRYFMYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV+NFTDVDDKII+R + G +PL+L+ +Y EY D L LP T P+ ++H+
Sbjct: 61 DVRYVQNFTDVDDKIIQRGHVEGMDPLALAQKYIDEYFKDAKALNILPATVHPKATEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I +I AY V+GDV+FAV+ PNYG+LSG+ LE+ +AG R+ VD RK +P D
Sbjct: 121 EMIEIIQGLIETGLAYDVDGDVYFAVDHFPNYGKLSGRTLEDMKAGARIEVDERKHHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEPSW+SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKKAKPGEPSWESPWGLGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ + YWMHN +T N EKMSKSLGNFFT R++ + +R +L+ HYR
Sbjct: 241 QTEGYLNGQTFAHYWMHNAFLTINQEKMSKSLGNFFTTRELLAKNSGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG--KTARINPAAEDCINKLRDEF 373
SPL+++ L A + + +++ + AL + G + RI + + R+ F
Sbjct: 301 SPLDFNDENLGMAQKGLERLQTSVRLAQQAL---ERTGSVRNERIEEGLKKAAQEAREAF 357
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD N++ F+ + ++N ++ P Q + + +K E+ EVL
Sbjct: 358 EKAMDDDFNSALAYAALFE-----LAKTMNGYVQEHPVSSQ--ALATAQKTLIELGEVLG 410
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
LL P +++ K + E VL++ R+ AR+ KD+ SD IR
Sbjct: 411 -FDLLHPAQVQVENEEMLSKVM-------ELVLKI---RSKARQKKDWEMSDFIRDAFKA 459
Query: 494 KGIALMDMGKETIWR 508
+GI + D + W+
Sbjct: 460 EGIVIEDTPQGASWK 474
>gi|150015023|ref|YP_001307277.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
gi|187629800|sp|A6LPP1.1|SYC_CLOB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149901488|gb|ABR32321.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 466
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 292/493 (59%), Gaps = 33/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N++T+QKE F PI+ G+V MYVCG T Y+ H+G+ R + FD + RYLE+ +V
Sbjct: 1 MRVFNTLTRQKEEFIPIITGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I +AND G L ++Y +EY D L+ T PR ++++ I
Sbjct: 61 RFVQNFTDIDDKMINKANDEGITVKELGDKYIKEYYQDADSLKIERATVNPRATEYIHDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ ++I AY V+GDV+++ +K NYGRL GQ L++ + G R++VD RK++P DFA
Sbjct: 121 IKFVEELIEAGFAYEVDGDVYYSTKKFDNYGRLVGQNLDDLQVGARISVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWGPGRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS
Sbjct: 181 VWKAQKPGEPAWESPWGPGRPGWHIECSCMAKKLLGDTIDIHAGGMDLRFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YW+H V +N+KMSKSL NFFT R++ E Y A+R ++S HYR +
Sbjct: 241 EALTGKTFANYWLHAAFVNVDNKKMSKSLNNFFTAREVLEEYSSDAIRFLMLSGHYRIQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE---DCINKLRDEFHA 375
N++ LDSA ++ + L +C L ++ ++ A E ++K R++F
Sbjct: 301 NFTKELLDSAKSSI----ERLYNCINNLENLKDEVTKKLMDEAEEKYLKSLDKYREKFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M DD NT+ ++ F ++ K S E K E+ V+E+ L
Sbjct: 357 KMDDDFNTADAISVLF-----------DLTKDINNNVNINSSSELCEKAESMVRELGNPL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G +LQ +K L E ++ +LIE+R ARKNKDF+ +D+IR DL +
Sbjct: 406 G---------ILQDRIEKDL------ETEIQELIEKRQQARKNKDFALADKIRDDLKSRN 450
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 451 IILEDTPQGVRWK 463
>gi|293392469|ref|ZP_06636789.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
gi|291424871|gb|EFE98080.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
Length = 461
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 278/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCGVT YDL H+GH R V+FD++ RYL +L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRA + GE L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDLEPRATQHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV GDV FA++ +YG LS Q L+ +AG RV VD KRNP DF
Sbjct: 122 IELTERLIARGHAYVASNGDVMFAIDSDADYGLLSRQDLDQLQAGARVEVDDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SSCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLGYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + +P D + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDPLATP---------------DGGAEFEARFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F + +N LK + E LRK+ ++LGL
Sbjct: 347 DDDFNTPEAYSALFD-----LAREVNRLKNEDMAAANAMAAE-LRKLA-------KVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK+KD++ +D R L G
Sbjct: 394 LQQEPEAFLQSGAQADDGEVAEIE-------ALIKQRNDARKSKDWALADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 472
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/487 (41%), Positives = 296/487 (60%), Gaps = 31/487 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F PI P KV MYVCG T Y+L H+G+AR + FD + RY E + EV
Sbjct: 2 IKIYNTLTKRKEEFKPIEPHKVRMYVCGPTVYNLIHIGNARPYIVFDTVRRYFESVGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTDVDDKII++AN+ G + + +Y +E L D+ +L P T+ PRV++ M++I
Sbjct: 62 NYVQNFTDVDDKIIKKANEEGRSTNEVVTQYIEETLKDVNNLNVTPATHHPRVTEEMDRI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPAD 196
+MI ++I AY + G V+F YG+LS + LE AG ERVA+ K+N D
Sbjct: 122 IEMIKELIEKGYAYEINGTVYFDTAAFEQYGKLSKKVLEELEAGRSERVALTEEKKNHMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK K GEP W+SPW GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIA
Sbjct: 182 FVLWKPKKEGEPYWESPWSNGRPGWHIECSAMAKRYLGDTIDIHAGGEDLVFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHN + +N+KMSKSLGNF T+R + E Y +R F+++AHYRS
Sbjct: 242 QSECANGKEFAHYWMHNAFLNIDNKKMSKSLGNFKTLRDVGEMYGYDVVRFFMLNAHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EF 373
PLN+S ++SA +++ + +++ + LS EH + A + + + +L D F
Sbjct: 302 PLNFSAELIESAKNSL----ERIKNAKATLSFALEHSQIADLTEEEKALLKELDDFKARF 357
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
H M DD NT+ ++ F+ +KF N+ K+ Q +E++ K+ NE+ +
Sbjct: 358 HEHMEDDFNTADAISIIFE-LVKFANTY-----AKEGASQ--PFVEAVLKLFNELTD--- 406
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL+ K L++E++ + IE+R AA+K +DF+++D+IR L
Sbjct: 407 ILGLI-----------YDRKGNNEDGLSDEEIKEYIEKRTAAKKARDFAEADRIRDFLKD 455
Query: 494 KGIALMD 500
+G+ + D
Sbjct: 456 QGVLIED 462
>gi|421863184|ref|ZP_16294884.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 483
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/504 (42%), Positives = 290/504 (57%), Gaps = 54/504 (10%)
Query: 22 YNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYV 81
YN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TYV
Sbjct: 15 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 74
Query: 82 RNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDM 141
RN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+ M
Sbjct: 75 RNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAM 134
Query: 142 ITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
I +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LW
Sbjct: 135 IETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLW 194
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 195 KAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVG 254
Query: 261 ACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 255 ATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEV 314
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P +
Sbjct: 315 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSE 361
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
+ F+ M+DD +T + F+ A + +N + N ++
Sbjct: 362 AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QL 402
Query: 425 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
+K + I+GLL + + L+ A+ L+ E++ LI R AR +K++++S
Sbjct: 403 AGRLKALGGIIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAES 457
Query: 485 DQIRADLTRKGIALMDMGKETIWR 508
D+IR L I L D T WR
Sbjct: 458 DRIRDLLNEHKIILEDTAGGTTWR 481
>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 473
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/504 (42%), Positives = 290/504 (57%), Gaps = 54/504 (10%)
Query: 22 YNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYV 81
YN++T+QKE F+PI P V MYVCG+T YD HLGHAR V FD++ R+L +TYV
Sbjct: 5 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 64
Query: 82 RNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDM 141
RN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+ M
Sbjct: 65 RNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAM 124
Query: 142 ITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
I +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LW
Sbjct: 125 IETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLW 184
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 185 KAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVG 244
Query: 261 ACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 304
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 245 ATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEV 304
Query: 305 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 364
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P +
Sbjct: 305 VRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSE 351
Query: 365 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 424
+ F+ M+DD +T + F+ A + +N + N ++
Sbjct: 352 AGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QL 392
Query: 425 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
+K + I+GLL + + L+ A+ L+ E++ LI R AR +K++++S
Sbjct: 393 AGRLKALGGIIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAES 447
Query: 485 DQIRADLTRKGIALMDMGKETIWR 508
D+IR L I L D T WR
Sbjct: 448 DRIRDLLNEHKIILEDTAGGTTWR 471
>gi|421652216|ref|ZP_16092579.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425750916|ref|ZP_18868870.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|445457362|ref|ZP_21446507.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
gi|408506489|gb|EKK08197.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425484701|gb|EKU51101.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|444776942|gb|ELX00979.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
Length = 473
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S + + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEVSTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQVTVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|340356801|ref|ZP_08679442.1| cysteine--tRNA ligase [Sporosarcina newyorkensis 2681]
gi|339620139|gb|EGQ24710.1| cysteine--tRNA ligase [Sporosarcina newyorkensis 2681]
Length = 473
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/495 (40%), Positives = 295/495 (59%), Gaps = 34/495 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++++YN++T++KE F PI GKV MYVCG T Y+ H+G+AR ++FD + RYLE+
Sbjct: 8 MSIQLYNTLTRKKEKFIPIEEGKVKMYVCGPTVYNYIHIGNARPVIAFDTVRRYLEYRGY 67
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDKII+ AN+L E L+NR+ + Y D+ L C T PRV++H+
Sbjct: 68 EVNYVSNFTDVDDKIIKAANELNEEVGELTNRFIEAYFEDVGALGCEKATAHPRVTEHIG 127
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I +I AY GDV+F + YG+LS Q ++ + G R+ ++ K +P D
Sbjct: 128 DIVQFIQLLIEKGYAYESNGDVYFHTREFDGYGKLSHQSIDELKVGARIEENAIKSDPLD 187
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIA
Sbjct: 188 FALWKAAKEGEISWDSPWGKGRPGWHIECSVMARELLGDTIDIHAGGQDLTFPHHENEIA 247
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS AA + +YWMHNG++ +NEKMSKSLGNF + I ++ P LR F++S HYR
Sbjct: 248 QSEAATGKTFANYWMHNGYINIDNEKMSKSLGNFILVHDIRKQIDPQVLRFFMLSVHYRH 307
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---F 373
P+N++ +++A++ + I + + LS +A + + ++++ ++ F
Sbjct: 308 PVNFAQDLVENAANGLERIRTAYHNVQHRLS------MSADLAEDPQSWLSRIDEQITAF 361
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ + F+ A + +++ +L+K +Q +E+ +++
Sbjct: 362 ENAMDDDFNTANAIAAIFELAKQ---ANVYLLEKNTDRQVLERFLEAF-------DQLMG 411
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LGL + V EL +E+V LI+ER ARKN+DF+++D+IR L
Sbjct: 412 VLGL----PFESV-----------DELVDEEVDALIQERLDARKNRDFARADEIRDQLKA 456
Query: 494 KGIALMDMGKETIWR 508
KGI L D + T W+
Sbjct: 457 KGIVLEDTAQGTRWK 471
>gi|445443240|ref|ZP_21442575.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|444762811|gb|ELW87163.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
Length = 473
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/491 (41%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|416069686|ref|ZP_11583362.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|347999795|gb|EGY40610.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 469
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 293/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGIDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E++V + LI++R AR KD++ +D R T+
Sbjct: 404 L----------QLDPEQFLQAGSDEDEVAKIEALIKQRNEARTAKDWAAADAARNASTKM 453
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 GIILEDGPNGTTWR 467
>gi|423073155|ref|ZP_17061898.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
gi|361855985|gb|EHL07919.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
Length = 477
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/494 (41%), Positives = 285/494 (57%), Gaps = 23/494 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+++N+M+ QKE F P GKVGMY CG T Y+ H+G+ R V FD++ RYL +
Sbjct: 1 MALRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDKII+R + G +PL L+ Y EY D A L +P + P+ +DH+
Sbjct: 61 DVTFVQNFTDIDDKIIKRGQEEGRDPLELAQDYIGEYFKDAAALNLMPASIHPKATDHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
++ ++I + AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV V RK+NP D
Sbjct: 121 EMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQNPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GEP W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIA
Sbjct: 181 FALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
Q+ + YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYR
Sbjct: 241 QAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILEYFPGEVIRFYLLGTHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPL++ L A + + +++ + AL ++ A + R EF
Sbjct: 301 SPLDFDDENLRMAQKGLERLQTSIRLADEALGRQGQNSADAAPEQKLRAAAEEARREFEE 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N++ F+ + ++N + P E L K + E+ +L
Sbjct: 361 AMDDDFNSALAYASFFE-----LGKAINAHVQAYPYSS-----EGLLKARATLWELADVL 410
Query: 436 G--LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
G L P +E Q D+ ++ L+E RA ARK KD+ SD IR L
Sbjct: 411 GFDLAKPANQAEAGNQKLDQVMEL----------LLEVRAIARKKKDWEMSDLIRDRLKD 460
Query: 494 KGIALMDMGKETIW 507
GI L D + W
Sbjct: 461 LGIVLEDTPQGARW 474
>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|424844377|ref|ZP_18268988.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|363985815|gb|EHM12645.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
Length = 467
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/492 (40%), Positives = 287/492 (58%), Gaps = 28/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T+ KELF P+ GKV Y CG T YD H+G+AR + FD+L RYLE+
Sbjct: 1 MALSLYNDLTRNKELFVPLADGKVSFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VT+V+NFTD+DDK+I RAN G L+ + +Y D L +Y PR +++M
Sbjct: 61 QVTFVQNFTDIDDKMIDRANRDGITVAQLAEKTIADYYEDADALGIKRASYNPRATEYMP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
QI ++ ++I+ AY V G V+F V+ P YGRLS Q ++ AG R+ VD K+ P D
Sbjct: 121 QIIQLVQKLIDRGHAYAVGGTVYFDVKSFPQYGRLSKQNMDELLAGARIEVDDAKKCPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK K GEP+WDSPWG GRPGWHIECS MS L DIH GG+DL FPHHENEIA
Sbjct: 181 FVLWKPQKPGEPAWDSPWGKGRPGWHIECSVMSTALLGDTIDIHSGGVDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ AA V++W+HN ++ + EKMSKSLGNF T R+ + Y PLA+R F++SAHYRS
Sbjct: 241 QAEAATGKPFVNFWLHNEYILIDKEKMSKSLGNFLTAREARKHYSPLAIRAFMLSAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S L+ A V + L++C L + + + + + + + R++F
Sbjct: 301 PVNFSPEGLEQAGAMV----ERLRNCWSDLQFAKSRRDLSYDDASLSEAVRQGREDFEEA 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ L GA + +K +N+ L K ++ K +++EV+ +LG
Sbjct: 357 MDDDFNTAGAL-GAVFEVVKAVNTHLKSSGALSGKG-----LDDAEKFFRDIEEVMGLLG 410
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L + ++ L+E+R AARK K+F++SD++R +L +GI
Sbjct: 411 ------------------LSHETDGDAEIDALVEQRNAARKAKNFAESDRLRDELAARGI 452
Query: 497 ALMDMGKETIWR 508
L D + T W+
Sbjct: 453 VLEDTPQGTKWK 464
>gi|423596979|ref|ZP_17572989.1| cysteinyl-tRNA synthetase [Bacillus cereus VD048]
gi|401218156|gb|EJR24840.1| cysteinyl-tRNA synthetase [Bacillus cereus VD048]
Length = 465
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + + + F
Sbjct: 301 PINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--MERFQVAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFS 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R AR+N+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKG 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|429763128|ref|ZP_19295486.1| cysteine--tRNA ligase [Anaerostipes hadrus DSM 3319]
gi|429179429|gb|EKY20678.1| cysteine--tRNA ligase [Anaerostipes hadrus DSM 3319]
Length = 467
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 288/492 (58%), Gaps = 31/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+QKE F P+ PGKVGMYVCG T Y+ H+G+AR + FD + RY E+ EV
Sbjct: 1 MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++AN+ G ++ RY +E DM L P T+QPR ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKKANEEGVTATEIAERYIKECKQDMEALNIKPATHQPRATEEIGGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
MI +I AY V+G V+F +YG+LS + +++ AG R V + K +P
Sbjct: 121 IKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTGEEGKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GE +WDSPWG GRPGWHIECS MS Y+ DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + +YWMHNG + NN+KMSKS GNFFT+R+I E+Y +R F++SAHYR
Sbjct: 241 AQSEACNGEKFANYWMHNGFLNINNKKMSKSAGNFFTVREIGEKYPLQVIRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+PLN+S ++SA + I + C ++ +E G ++ I L +F
Sbjct: 301 TPLNFSDTLVESAKTGLDRILTAIDLCR-EMAAKEETGSLSKEETEHFANIEVLVKKFED 359
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ ++++ + S + K+VL++L
Sbjct: 360 AMEDDFNTADAVSAIFE-----------IVRESNSTVKDFSA--------DYAKKVLKVL 400
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
++ L + K E+ +E++ +LIEER AARKNKDF+++D+IR L +G
Sbjct: 401 --------EDLCSVLGIETTKEEEILDEEIEKLIEERQAARKNKDFARADEIRDQLLEQG 452
Query: 496 IALMDMGKETIW 507
I L D + W
Sbjct: 453 IVLKDTREGVKW 464
>gi|373468293|ref|ZP_09559550.1| cysteine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371766384|gb|EHO54639.1| cysteine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 469
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/497 (41%), Positives = 296/497 (59%), Gaps = 37/497 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+++++KE F PI GKV MYVCG T Y+L H+G+AR + FD + RY E+ +V
Sbjct: 1 MKIFNTLSRRKEEFVPIEEGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII +A + G + +S RY E DMA + LP T P + + +
Sbjct: 61 NYVSNFTDVDDKIINKAIEEGVDAAVISQRYIDECKKDMAAMNVLPATKNPLATQEIGGM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
+DMI ++I + AYV +G V+F V+ +YG+LS + ++ ++G R V + K +
Sbjct: 121 EDMIGELIESGHAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVTGEDGKEDS 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK K GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENE
Sbjct: 181 NDFVLWKPKKDGEPFWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDLIFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS +A S +YWMHN + +N+KMSKS GNFFT+R I+E+Y LR F++SAHY
Sbjct: 241 IAQSESASGKSFANYWMHNAFLNIDNKKMSKSAGNFFTVRDISEKYDLQVLRFFMLSAHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA---EDCINKLRD 371
RSPLN+S +++A +++ I + + + A+ + A I+ A + L+D
Sbjct: 301 RSPLNFSADLMEAAKNSLERILTGVDNIKSAI----QRDNKAPISDAELSNLEIAKVLKD 356
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
+F A M DD NT+ ++ F+ +K N++LN + + L +IE L
Sbjct: 357 KFVAAMDDDFNTADAISAIFE-LIKLSNTTLNETSTAEYAKGLLKVIEPL---------- 405
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LG++ ++AE+ + ++ LIE+R ARKNKDF+ +D+IR DL
Sbjct: 406 CDVLGIITE---------------RKAEILDSEIEDLIEQRTQARKNKDFALADKIRNDL 450
Query: 492 TRKGIALMDMGKETIWR 508
KGI L D + W+
Sbjct: 451 LEKGIVLEDTREGVKWK 467
>gi|423526408|ref|ZP_17502857.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA4-10]
gi|401163458|gb|EJQ70804.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA4-10]
Length = 465
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--MEKFQVAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFS 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R AR+N+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKG 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTVQGTRWK 463
>gi|375134138|ref|YP_004994788.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 473
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+ E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ-----KTTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALS---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 296/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHDVDAFLKSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|259909186|ref|YP_002649542.1| cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|387872139|ref|YP_005803519.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
gi|224964808|emb|CAX56330.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|283479232|emb|CAY75148.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
Length = 462
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/494 (42%), Positives = 282/494 (57%), Gaps = 39/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI G +GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGNIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIERLTNRMIDEMHKDFAALNILPPDLEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ P YG LS Q L+ +AG RV V + KRNP D
Sbjct: 122 IELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ LS FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLSEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 QSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L+ A A+ +Y L++ + +P AR F
Sbjct: 302 QLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEAR---------------FREA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F + +N +K + P L LR + +LG
Sbjct: 347 MDDDFNTPEAYSALFD-----LAREVNRMKGEDPAAAD-GLAARLRVLGG-------VLG 393
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LL P + + + D+ + + E LI+ R ARK K+++++D R L
Sbjct: 394 LLEQDPQQFLQSGVNINDEEVAQIE-------ALIQMRIDARKEKNWAQADVARDRLNEM 446
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 447 GIVLEDGAGGTRWR 460
>gi|421541345|ref|ZP_15987471.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
gi|402314868|gb|EJU50436.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
Length = 473
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 285/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ L + K L L+
Sbjct: 351 EADDDYTRRFYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI +R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIAQRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|126668153|ref|ZP_01739115.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
gi|126627423|gb|EAZ98058.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
Length = 464
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/495 (42%), Positives = 288/495 (58%), Gaps = 39/495 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN+++Q+KE F PI PGKVG+YVCG+T YD HLGHAR V+FD++ RYL H +V
Sbjct: 2 IRIYNTLSQKKEQFKPIEPGKVGLYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKI+RRA++ GE L+ R D A L L P +PR + + +
Sbjct: 62 NYVRNITDIDDKILRRADENGEVYTCLTERMIAAMHEDEARLGVLSPNAEPRATAFISDM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AY + GDV+F V +YG+LS ++LE+ AG RV V+ KR+PADF
Sbjct: 122 IAMIETLIAGGHAYAADNGDVYFLVSSFADYGKLSKKKLEDLLAGARVDVEQAKRSPADF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK E W SPWG GRPGWHIECSAM+ H L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKAAKPDEVFWPSPWGNGRPGWHIECSAMANHCLGDTFDIHGGGPDLLFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+ WMH G + N EKMSKSLGNFFTIR+I E Y +R+FL+S+HYRS
Sbjct: 242 SECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMETYPAEVVRYFLVSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE--FHA 375
++YS L + ++ +Y L+ + P A D + + + F
Sbjct: 302 VDYSEDNLIESGRSLTKLYNALRG----------------VTPLASDAVARTAHDTLFVK 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
RM DD N + + L + +N ++ +Q + L ++ + +L
Sbjct: 346 RMDDDFNCAGAMA-----TLHALAGEMNQQRRDGDEQAAAASATVLVRLGS-------VL 393
Query: 436 GLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GLL P + + + + EL+ + +I+ RA ARK +DF+ +DQIR +L
Sbjct: 394 GLLQQDPELF------FQSDSGQGNELSAGQIETMIQSRADARKTRDFAGADQIRDELLA 447
Query: 494 KGIALMDMGKETIWR 508
+G+ L D + T WR
Sbjct: 448 RGVILDDSREGTSWR 462
>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
Length = 473
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ GE L+ R+ D A+L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGSAYPAANGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QMYGQT-----TTETLDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRYLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 473
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/507 (42%), Positives = 285/507 (56%), Gaps = 54/507 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++T++KE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +
Sbjct: 2 LTIYNTLTRKKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I N AY GDV++AV + YG+LSG+ L++ RAG+RV VD KR+P DF
Sbjct: 122 IAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGKRVEVDGFKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYH 301
S A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 242 SVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYD 301
Query: 302 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA 361
P +R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 302 PEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------- 353
Query: 362 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 421
N F+A M+DD T + F+ L + K L L
Sbjct: 354 -----NDYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCL 396
Query: 422 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ + I+GLL + + L+ A+ L+ E++ LI R AR +K++
Sbjct: 397 KALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNW 444
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR L I L D T WR
Sbjct: 445 AESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|423556914|ref|ZP_17533217.1| cysteinyl-tRNA synthetase [Bacillus cereus MC67]
gi|401194229|gb|EJR01221.1| cysteinyl-tRNA synthetase [Bacillus cereus MC67]
Length = 465
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKIFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--MEKFQVAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFS 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R AR+N+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKG 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|91788726|ref|YP_549678.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
gi|122967676|sp|Q129L2.1|SYC_POLSJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91697951|gb|ABE44780.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
Length = 462
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/503 (43%), Positives = 288/503 (57%), Gaps = 57/503 (11%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN++++ E+F+P++PG V MYVCG+T YDL HLGHARA V+FD++ R+L+
Sbjct: 1 MSLRIYNTLSRDVEVFSPLLPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKII+RA + GE SL++R D L PT++PR +D +
Sbjct: 61 KVTYVRNVTDIDDKIIKRAVENGETIRSLTDRMVVALHQDADALGIERPTHEPRATDFVP 120
Query: 137 QIKDMITQIINNDCAYVVE-----GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRK 191
Q+ +I + AY + GDV +AV K YG+LSG+ L+ RAGERV V K
Sbjct: 121 QMLSLIGTLEKKGLAYQTQSGSGQGDVNYAVRKFDGYGKLSGKSLDELRAGERVEVLDGK 180
Query: 192 RNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 248
+P DF LWK+AK EP WDSP+GPGRPGWHIECSAM+ L FDIHGGG DL F
Sbjct: 181 DDPLDFVLWKSAKPSEPDDAKWDSPYGPGRPGWHIECSAMACELLGESFDIHGGGADLQF 240
Query: 249 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 308
PHHENEIAQS A WMHNG V +NEKMSKSLGNFFTIR+I +Y +R F
Sbjct: 241 PHHENEIAQSEGAFGKPLAGTWMHNGFVRVDNEKMSKSLGNFFTIREILAKYDAETVRFF 300
Query: 309 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA--AEDCI 366
+I AHYRSPLNYS LD A +++ +Y L ++PA A D
Sbjct: 301 IIRAHYRSPLNYSDAHLDDARNSLKRLYTALD----------------LVSPAVVAIDWT 344
Query: 367 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 426
N F A M +D T + F D +N K + L++SL
Sbjct: 345 NPFAARFKAAMDEDFGTPEAVAVLF-DLAGEVN--------KTRSAELAGLLKSLGG--- 392
Query: 427 EVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 484
LGLL PG+Y + L D +++R LI +RA A+K K+F+++
Sbjct: 393 -------CLGLLQSAPGSYLQAGAGLDDASIQR----------LIAQRADAKKTKNFAEA 435
Query: 485 DQIRADLTRKGIALMDMGKETIW 507
D+IR DL +GI L D T W
Sbjct: 436 DRIRNDLLGQGIVLKDSPAGTTW 458
>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
Length = 473
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 284/504 (56%), Gaps = 54/504 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDVEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIEALIRNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSDKLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y P
Sbjct: 244 GASGHVCGHEHAHTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A +A+ +Y TL + V FQ + A
Sbjct: 304 IVRFFILRAHYRSPLNYSDAHLDDAKNALTRLYNTLAN--VPPVEFQ-------VASEAN 354
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
D + F A M+DD +T + F+ L + K Q L L+
Sbjct: 355 DYTRR----FFAAMNDDFDTVQAVAVLFE------------LAGEANKTQSAELSGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ + GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 399 LAGTI-------GLLQRNP-TEFLQ----GGATANGLSNEEIEALIARRKQARADKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIW 507
SD+IR L +GI L D T W
Sbjct: 447 SDRIRDLLAEQGITLRDGADGTSW 470
>gi|153855861|ref|ZP_01996836.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
gi|149751829|gb|EDM61760.1| cysteine--tRNA ligase [Dorea longicatena DSM 13814]
Length = 468
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/496 (41%), Positives = 286/496 (57%), Gaps = 36/496 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+MT++KE F P+ GKV MYVCG T Y+ H+G+AR + FD + RY E+ +V
Sbjct: 1 MKIFNTMTKKKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++A + G +S RY E DM + P T P ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKKAIEEGVTADEISKRYIAECKKDMDGMNIKPATKNPLATEEICGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
DMI +I+ AY G V+++ K +YG+LS + L++ R+GER V+ + K +P
Sbjct: 121 VDMIQTLIDKGFAYEKNGTVYYSTRKFKDYGKLSHKNLDDLRSGERSLLVSGEDEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEP+W+SPW GRPGWHIECS MS YL + DIH GG DL+FPHHENEI
Sbjct: 181 DFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHN + +N KMSKSLGNF T+R+I+E+Y LR F++SAHYR
Sbjct: 241 AQSEAANGKEFARYWMHNAFLNIDNRKMSKSLGNFRTVREISEQYDLQVLRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---E 372
SPLN+S ++++ + + I + L E+ K I A + K +
Sbjct: 301 SPLNFSADLMEASKNGLERIVNAADN----LKFLMENAKAEAITDAEAENFAKTEEFVAG 356
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT+ + F D +K+IN++ + K+ Q+ L+ L
Sbjct: 357 FEKAMDDDFNTADAVAAIF-DLVKYINTTTDAESSKEYLQKLFDLLVKLTG--------- 406
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGL+ K+ E+ +ED+ +LIEER AARK KDF+++D IR +L
Sbjct: 407 -VLGLIVD---------------KKEEILDEDIEKLIEERQAARKAKDFARADAIRDELL 450
Query: 493 RKGIALMDMGKETIWR 508
KGI L D + W+
Sbjct: 451 EKGIILKDTREGVQWK 466
>gi|261409541|ref|YP_003245782.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
gi|261286004|gb|ACX67975.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
Length = 468
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/492 (42%), Positives = 284/492 (57%), Gaps = 26/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++T+ KE F PGKV +YVCG T YD H+G+AR + FD++ Y E+
Sbjct: 1 MALQIYNTLTRMKETFVAQEPGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQGN 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR+A G ++ ++ Y D+ L T PRV+D+ME
Sbjct: 61 DVNYVVNFTDVDDKMIRKAEQTGTTVPEVAEKFINAYYEDLDGLGIPRATLNPRVTDNME 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++I+ D AY GDVF+ K +YG+LS Q L+ + G R+ VD RK NP D
Sbjct: 121 SIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKRKENPED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE W SPWG GRPGWHIECSAM+ YL DIHGGG DL FPHHE E+A
Sbjct: 181 FVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPHHECEVA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A +YWMHNG++ NNEKMSKSLGN ++++ E+Y A+R+F++S HYR+
Sbjct: 241 QSEALTGKPLANYWMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAVRYFMLSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNYS ++ A ++V + + E L K +++ D I+ + EFH +
Sbjct: 301 PLNYSDEVMEQAQNSVERLANAAANVEHRLGT-AIGSKDDQVSQDVADKISAVLVEFHEK 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT +T FQ A S N L K+ L E LR NE+ VLRI+
Sbjct: 360 MQDDFNTPDAITAMFQWA-----SEANQL-LKEASIPAADLHEVLRAF-NEMNGVLRIVN 412
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
EL +E++ LI ER ARKNK+++++D+IR L +GI
Sbjct: 413 ------------------NGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGI 454
Query: 497 ALMDMGKETIWR 508
L D + WR
Sbjct: 455 VLEDTAQGMRWR 466
>gi|421624016|ref|ZP_16064894.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408702528|gb|EKL47938.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
Length = 473
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII+RAN+ E L+ R+ D A+L CL P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIKRANENDETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A ++ Y + + + Q +G+T E + F+ M
Sbjct: 306 VNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ Q L +LR + N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHNVDDFLKSDIGQDALA---LSDAEIENFIQQRVDAKKAKDFAKADSIRQSLLEQGVV 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|423480234|ref|ZP_17456924.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
gi|401149239|gb|EJQ56714.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
Length = 465
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/498 (41%), Positives = 291/498 (58%), Gaps = 41/498 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDHNEKW----LAE--MEKFQAAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A Q L E K+
Sbjct: 355 EEAMDDDFNTANAITELYNVA---------------NHANQYLLEEHTSKV--------- 390
Query: 434 ILGLLPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
GAY + L+ L D L + EL +E++ LI++R ARKN+DF+ SDQIR D
Sbjct: 391 -----VIGAYVKQLETLFDILGLELAQEELLDEEIETLIQKRIEARKNRDFALSDQIRDD 445
Query: 491 LTRKGIALMDMGKETIWR 508
L + I L D + T W+
Sbjct: 446 LKERNIILEDTAQGTRWK 463
>gi|385787638|ref|YP_005818747.1| cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
gi|310766910|gb|ADP11860.1| Cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
Length = 462
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/494 (42%), Positives = 281/494 (56%), Gaps = 39/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYHL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+NR E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIERLTNRMIDEMHQDFAALNILPPDLEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ P YG LS Q L+ +AG RV V + KRNP D
Sbjct: 122 IELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 QSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L+ A A+ +Y L++ + +P AR F
Sbjct: 302 QLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEAR---------------FREA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F + +N +K + P L LR + +LG
Sbjct: 347 MDDDFNTPEAYSALFD-----LAREVNRMKGEDPAAAD-GLAARLRVLGG-------VLG 393
Query: 437 LLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LL P + + + D+ + + E LI+ R ARK K+++++D R L
Sbjct: 394 LLEQDPEQFLQSGVNINDEEVAQIE-------ALIQMRIDARKEKNWAQADVARDRLNEM 446
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 447 GIVLEDGAGGTRWR 460
>gi|392309602|ref|ZP_10272136.1| cysteinyl-tRNA synthetase [Pseudoalteromonas citrea NCIMB 1889]
Length = 459
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 281/493 (56%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QK F P+V GKV MYVCG+T YD H+GHAR VSFD++ RY HL +V
Sbjct: 2 LQIYNTLTRQKTPFKPLVEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYFRHLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ +L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNEDINALTVRMTKAMHEDFDALNILPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV GDV F V YG+LS Q LE +AG RV V K +P DF
Sbjct: 122 IEMIERLITKGHAYVASSGDVLFDVSTFEQYGQLSQQNLEMLQAGARVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWTSPWGEGRPGWHIECSAMSSKHLGDFFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R++ ++Y +R+FLI+ YRS
Sbjct: 242 SCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKKYDRETVRYFLINGQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ IY L+ E P + + A N + F M
Sbjct: 302 LNYSQENLEQARASLERIYTALRGVE----PVE-------VTLAG----NSYVERFETAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L F+ + +N+LK K E K ++ L
Sbjct: 347 NDDFNTPEALPVIFE-----LAKEVNLLKDKDS--------------EAAAKHAYILVML 387
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G + QQ + L+ + +E + LI R AR +KD++ +D R LT G
Sbjct: 388 ---GEVLGIAQQAPESFLQGEQDNDEVAKIEALIVARNEARASKDWAAADVARDALTALG 444
Query: 496 IALMDMGKETIWR 508
+ L D +T WR
Sbjct: 445 VVLEDSAGKTTWR 457
>gi|226328546|ref|ZP_03804064.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
gi|225203279|gb|EEG85633.1| cysteine--tRNA ligase [Proteus penneri ATCC 35198]
Length = 463
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/491 (44%), Positives = 281/491 (57%), Gaps = 33/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI GK+GMYVCG+T YDL H+GH R V+FD + RYL +L +V
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 NYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNIARPDSEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV FA++ P+YG LS Q LE +AG RV V + KRNP DF
Sbjct: 122 IELTEALIKLGHAYVADNGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVANVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGKGRPGWHIECSAMNSKELGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ +Y +L+ + P A +F M
Sbjct: 302 LNYTEENLKQARTALERLYTSLRGTDENAQPVGGEAFEA---------------QFIDAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F + +N LK L LRK+ ++LGL
Sbjct: 347 NDDFNTPEAYSVLFD-----LAREVNRLKAVDMNAAN-GLAAVLRKLA-------KVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E Q KA +E+ E + LI++R ARKNKD++ +D R LT GI
Sbjct: 394 LEQ--EPEHFLQSGAKADDASEV--EKIELLIQQRNDARKNKDWAAADVARDALTAMGIV 449
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 450 LEDGPQGTVWR 460
>gi|385340928|ref|YP_005894800.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|416180165|ref|ZP_11611350.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|416185171|ref|ZP_11613345.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|416193715|ref|ZP_11617271.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|416209140|ref|ZP_11621220.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|421543337|ref|ZP_15989432.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|433468080|ref|ZP_20425527.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|433470229|ref|ZP_20427634.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|433493523|ref|ZP_20450604.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|433495574|ref|ZP_20452632.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|433503920|ref|ZP_20460871.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|402314983|gb|EJU50550.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|432200763|gb|ELK56852.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|432200991|gb|ELK57078.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|432225583|gb|ELK81324.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|432227143|gb|ELK82855.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|432238194|gb|ELK93770.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
Length = 473
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 283/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ L + K L L+
Sbjct: 351 EADDDYTRRFYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 399 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|169344133|ref|ZP_02865116.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|169297744|gb|EDS79843.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
Length = 466
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 289/490 (58%), Gaps = 27/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++KE F P+ PG+V MYVCG T Y+ H+G+ R + FD + RY E+ +V
Sbjct: 2 IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I++AN+ G + + Y +EY D L T PR ++ + +I
Sbjct: 62 DFVQNFTDIDDKMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA
Sbjct: 122 IKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 182 IWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YW+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR L
Sbjct: 242 EALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+SA +V IY + + E + A + +N+ ++++ +M
Sbjct: 302 NFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNQYKEKYIEKMD 360
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ +T F D +K N+++ + K+ Q+ L LI R LG
Sbjct: 361 DDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELI--------------RELG-A 404
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
P G + + + L EE + LI +R ARK++DF+ +D+IR +L +GI L
Sbjct: 405 PLGMFQKST---------KGNLAEE-IEALIAKRQQARKDRDFALADKIRDELKDRGIIL 454
Query: 499 MDMGKETIWR 508
D + W+
Sbjct: 455 EDTPQGVRWK 464
>gi|390456401|ref|ZP_10241929.1| cysteinyl-tRNA ligase [Paenibacillus peoriae KCTC 3763]
Length = 467
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/492 (41%), Positives = 295/492 (59%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN+MT+ +E F P PGKV MYVCG T YD H+G+AR + FD++ YLE+L
Sbjct: 1 MPLQIYNTMTRSREPFVPQEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR+A +L +++ ++ Y D+ L + PRV++ ME
Sbjct: 61 DVNYVVNFTDVDDKLIRKARELDMEVPAVAEKFIAAYHEDLTGLNVPAASINPRVTESME 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++++ D AY +GDVF+ +K +YG+LSGQ LE + G R+ VD RK N D
Sbjct: 121 LIIDFIKELVDKDYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRIHVDERKENAED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE W SPWG GRPGWHIECSAM+ HYL DIHGGG DL FPHHE E A
Sbjct: 181 FVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ +NEKMSKSLGN ++ + R+ P ALR+F++S HYR+
Sbjct: 241 QSEAITGKPLARYWMHNGYIRIDNEKMSKSLGNGILVKDLRARHKPEALRYFMLSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNY+ + A ++V I + + + L+ + + ++ + ++ + +F +
Sbjct: 301 PLNYNQETMSQAENSVERIANAVANVKHRLANALKGDE--EVSAELQTKLDGILQQFGEK 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT +T F+ +++ + ++L++ Q +L +++ + +VLRI
Sbjct: 359 MDDDFNTPDAITAVFE----WVSEANHLLQRDVVNQAEL---KAVLHTFYSMNKVLRI-- 409
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
YSE +++L D +++ QLI ER ARK K++ ++D+IR L KGI
Sbjct: 410 ------YSEPVEELLD----------DEIEQLIAERVEARKTKNWGRADEIRDLLAAKGI 453
Query: 497 ALMDMGKETIWR 508
L D + WR
Sbjct: 454 VLEDTAQGMRWR 465
>gi|433497645|ref|ZP_20454670.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|433499690|ref|ZP_20456691.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|433501759|ref|ZP_20458738.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
gi|432231584|gb|ELK87243.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|432232373|gb|ELK88018.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|432232760|gb|ELK88396.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
Length = 473
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 288/505 (57%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 244 GATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 350
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ A + +N + N +
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------Q 391
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ +K + I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 392 LAGCLKALGGIIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAE 446
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 447 SDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|359434426|ref|ZP_09224691.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
gi|357918934|dbj|GAA60940.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
Length = 459
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 281/493 (56%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L++R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTSRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IVMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ + Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D E + N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRDVEPVECDLEG---------------NEFVAKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + LN +K + Q ++ +LR LG
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKDTEADQA------------GKLAFILRSLGE 389
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVL--QLIEERAAARKNKDFSKSDQIRADLTRKG 495
+ V QQ + L+ + +E + LI +R +R +K+++ +D+ R L G
Sbjct: 390 VLG-----VAQQAPEAFLQGGQDDDEVAIIEALIVKRNESRASKNWAAADEARDALNALG 444
Query: 496 IALMDMGKETIWR 508
+ L D +T WR
Sbjct: 445 VILEDSAGKTTWR 457
>gi|238760398|ref|ZP_04621538.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
gi|238701403|gb|EEP93980.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
Length = 461
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 281/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +P + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPHATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I + AYV + GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTERLIARNHAYVADNGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F A M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKTED--------MTAANALAAELRKLAHVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQSGAQTDDDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|403071329|ref|ZP_10912661.1| cysteinyl-tRNA ligase [Oceanobacillus sp. Ndiop]
Length = 466
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/497 (41%), Positives = 288/497 (57%), Gaps = 38/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+++YN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + RY E+
Sbjct: 1 MTIRVYNTLTREKEDFKPLEEGKVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V YV NFTDVDDKII+ A +LGE+ L++++ Q YL D+ L T+ PRV + M+
Sbjct: 61 NVDYVLNFTDVDDKIIKTARELGEDVPELADKFIQAYLEDVGALGVKKATHNPRVMETMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY EGDV+F YG+LS Q ++ R+G R+ V +K +P D
Sbjct: 121 DIIAFIDALVQKGFAYEAEGDVYFKPRAFNGYGKLSHQSIDELRSGARIQVGEKKNDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK GE SWDSPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKKAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YWMHNG++ +NEKMSKSLGNF R + + P LR F++S HYR+
Sbjct: 241 QSEAMTGHTFANYWMHNGYINIDNEKMSKSLGNFVLTRDLVAHHDPQVLRFFMLSVHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+N++ L+SA ++ I + EH K + ++ + I+ L++
Sbjct: 301 PINFTEELLESAKNSYDRIKTAYHNL--------EHRKQSSMDLINDTDVWIPLIDGLKN 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F A M DD NT++ ++ F D K N L Q KQ ++I+ +K + +
Sbjct: 353 RFEAEMDDDFNTANAISVLF-DLSKEANVYL------QSKQTSAAVIDHFQKT---IMTL 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
L++LG+ + EL +E + LI ER ARKN+DF+++D+IR L
Sbjct: 403 LQVLGI---------------NLAETEELLDETIEALIVERNEARKNRDFARADEIRDLL 447
Query: 492 TRKGIALMDMGKETIWR 508
+ I L D + W+
Sbjct: 448 KERAIILEDTPQGVRWK 464
>gi|359428272|ref|ZP_09219308.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236288|dbj|GAB00847.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 473
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/491 (41%), Positives = 300/491 (61%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE L+ R+ D A+L C+ P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGETIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ +++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MISTLVDKGAAYPATNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + + Q +G+ E + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFKAYQ------QVYGQ-----KTVETLEQSFVERFNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q +L +LR++ N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATALYSTLRQLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHDVDEFLKSDIGQEALT---LSDTEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
Length = 699
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 283/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 576
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ L + K L L+
Sbjct: 577 EADDDYTRRFYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNDAQLAGCLKA 624
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 625 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAE 672
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 673 SDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|297618406|ref|YP_003703565.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297146243|gb|ADI03000.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 539
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/537 (39%), Positives = 300/537 (55%), Gaps = 53/537 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN+++++KE + P KV MYVCG T Y+ HLG+AR V FD++ RYL++ EV
Sbjct: 2 IQVYNTLSRRKERLNTLEPNKVKMYVCGPTTYNYIHLGNARPLVVFDIIRRYLQYKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII+R+ + G++ ++ +Y EY D L Y PRVSDH+ I
Sbjct: 62 TYVQNFTDVDDKIIQRSQEEGKSAAEVAGKYIDEYFRDADALGVKRADYHPRVSDHIPDI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I ++ AY + GDV++ V YG+LSG+ LE AG RV VD RK +P DFA
Sbjct: 122 IRVIETLVEKGYAYRIGGDVYYRVRAFERYGQLSGRSLEEMLAGARVEVDERKEDPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP+W+SPWGPGRPGWHIECS M+ YL DIHGGG DL+FPHHENEIAQS
Sbjct: 182 LWKEAKPGEPAWESPWGPGRPGWHIECSVMAMKYLGETLDIHGGGADLVFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+HNG +T N EKMSKSLGNFF +R+I +Y +R +L S HYRSPL
Sbjct: 242 EAYSGRPFVRYWLHNGFITVNKEKMSKSLGNFFILREILSQYPAEVVRFYLGSTHYRSPL 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
++ +L+ A A+ + TL+ V + + +T + +++L+++F
Sbjct: 302 DFDNTKLEEAGRALARLNNTLRRLNEVVKNEEVEANDETRDADKGFVSRLHELKEKFEVA 361
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL--RI 434
M DD NT+ + G D + IN+ L+ + + + ++ E+ R V +L I
Sbjct: 362 MDDDFNTAQAI-GYLFDMAREINAYLDFWEGEGSSKAPAAIKEAYR-----VFTLLGGNI 415
Query: 435 LGLLP----------PGAYSEVLQQLKDKALKRAELTE---------------EDVLQ-- 467
LG L E+L ++K++AL+ L ED
Sbjct: 416 LGFLSEDFEHKGHGISDKVIEILFEMKEEALESGSLERVERILSCLQSAGIEIEDTFSGS 475
Query: 468 ----------------LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
L+ R+ AR+NKDF+ +D IR +L + G+ + D + WR
Sbjct: 476 TWRANRPVNVSDLIEPLLSWRSEARRNKDFTTADVIRDNLKKIGVVVEDTREGARWR 532
>gi|421493946|ref|ZP_15941299.1| CYSS [Morganella morganii subsp. morganii KT]
gi|455740332|ref|YP_007506598.1| Cysteinyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
gi|400191717|gb|EJO24860.1| CYSS [Morganella morganii subsp. morganii KT]
gi|455421895|gb|AGG32225.1| Cysteinyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
Length = 462
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 287/491 (58%), Gaps = 33/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI PGK+GMYVCG+T YDL H+GH R V+FD + RYL H +V
Sbjct: 2 LKIYNTLSRQKEEFKPINPGKIGMYVCGITVYDLCHIGHGRTFVAFDTIVRYLRHAGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TDVDDKIIRRAN+ E L +R E D + + P +PR + H+++I
Sbjct: 62 NYIRNITDVDDKIIRRANENNETCDQLVDRMVAEMHRDFDAMNLMRPDSEPRATHHIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ AYV + GDV F + P YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITQLLLDRGHAYVADNGDVMFDISSDPEYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y P +R+FL+SAHYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLGYYDPETVRYFLLSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ Y L+ + K A + E+ N+ RD M
Sbjct: 302 LNYTEENLKQARTALERFYTALRGTD----------KDAAV-VVNEEFANRFRDA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A LN LK++ + + + +++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----RELNRLKQED--------MTAANGLAAQLRQLAGVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + Q L+ A ++ + LI++R AR +K+++ +D R LT GI
Sbjct: 394 LT----QDPEQFLQSGAQSESDEDAAKIEALIKQRNDARASKEWALADAARDALTDMGIV 449
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 450 LEDGPQGTTWR 460
>gi|167036780|ref|YP_001664358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039500|ref|YP_001662485.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|256752501|ref|ZP_05493358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300915250|ref|ZP_07132565.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307725174|ref|YP_003904925.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|320115202|ref|YP_004185361.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|229558799|sp|B0KCH9.1|SYC_THEP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558800|sp|B0K5F6.1|SYC_THEPX RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166853740|gb|ABY92149.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|166855614|gb|ABY94022.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748636|gb|EEU61683.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300888974|gb|EFK84121.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307582235|gb|ADN55634.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|319928293|gb|ADV78978.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 466
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 290/493 (58%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++++ KE F P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ +V
Sbjct: 1 MKLYNTLSRTKEEFEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII+RA + ++ +Y +EY +D +L T P+ ++H+E I
Sbjct: 61 NYVQNFTDIDDKIIKRAQEENVTTKEVAEKYIEEYFIDADNLGIKRATVHPKATEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ AYVV G+V+F K +YG+LS + +E +AG R+ ++ K+NP DF
Sbjct: 121 IEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEEKKNPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG DL+FPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMH G++ NNEKMSKS GNFFT+R+ITE+Y+P LR F++ AHYRSP+
Sbjct: 241 EAAYGQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVLRLFMLMAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-- 376
N+S+ ++ A A Y+ L + L K +N + K +
Sbjct: 301 NFSLDLMEQAKSA----YERLLNAVANLKHLLTVCKDRELNEEEKRIKEKFEEYKKEFED 356
Query: 377 -MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ + K N++++ K+ L+E + I ++ E IL
Sbjct: 357 AMDDDFNTADAISVLFEMS-KTANTNISGNSSKK-------LVEYILDIFLKLSE---IL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL G EL +E++L LIEER ARK K++ +D+IR L KG
Sbjct: 406 GLSYRGV--------------ETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKG 451
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 452 IILEDTPEGVRWK 464
>gi|452944310|ref|YP_007500475.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. HO]
gi|452882728|gb|AGG15432.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. HO]
Length = 488
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/491 (40%), Positives = 289/491 (58%), Gaps = 12/491 (2%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN+++ + E F PI P +V +Y CGVT YD SH+GH R+ + FD+ RYLE L V +
Sbjct: 5 LYNTLSAELEEFVPINPPQVNIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEKLGYRVKF 64
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTD+DDKII +AN+ ++ +S++NRY Y +DM + P +PRV++HME+I
Sbjct: 65 VRNFTDIDDKIINKANEENKDFMSIANRYIARYYLDMEAINVKPANVEPRVTEHMEEIIS 124
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
+I+++I AY +GDV+F+++ YG+LS + E AG R+ +KRNP DFALW
Sbjct: 125 LISKLIELGKAYESDGDVYFSIDSFKEYGKLSKRSPEELEAGARIEPSLKKRNPLDFALW 184
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KA+K+ EP W+SPW GRPGWH EC AM +L DIH GGIDL+FPHHENEIAQ+ +
Sbjct: 185 KASKSHEPGWESPWSYGRPGWHTECVAMIFKHLGETIDIHAGGIDLVFPHHENEIAQAES 244
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
YWMHNG VT +KMSKSLGNF T+++I +YHP LR ++ HYRSPL++
Sbjct: 245 ITGKPFARYWMHNGLVTVGGKKMSKSLGNFITLKEIYTKYHPDVLRLLVLFTHYRSPLDF 304
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDD 380
S +++ A + ++D E L + GK ++ +++F+ +S+D
Sbjct: 305 SFEKMEETKKAYERLKSAIEDIE-PLKAIAKEGKPV-VDIDFYSLEKSTQEQFYKALSED 362
Query: 381 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLR-ILGL 437
NTS + F + LN K + K ++ +E + N +K+ L+ I GL
Sbjct: 363 FNTSLAMAQVFNAV-----AELNRAKTESFKIGYITPKELEGYLFLANSLKQTLKDIFGL 417
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L L+ L+ + ++ E + LI+ R A++NKDF +D IR +L GI
Sbjct: 418 LEENTLQNTLKTLEPAS--SVNISTEFLEILIKARNLAKENKDFKVADFIRDELLNYGIK 475
Query: 498 LMDMGKETIWR 508
L D TIW+
Sbjct: 476 LEDTKAGTIWK 486
>gi|332982044|ref|YP_004463485.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699722|gb|AEE96663.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 467
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 288/493 (58%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+++YN++T+++E+F P+ V MYVCG T YD H+G+AR V FD L RYLE+ +V
Sbjct: 2 VRLYNTLTRKQEIFEPLNDNTVTMYVCGPTVYDYFHIGNARPLVVFDTLRRYLEYRGYKV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDK+I+RAN G L +R+ QEY VD L P PR ++H+ +
Sbjct: 62 KYVQNFTDIDDKMIKRANQEGITVKELGDRFIQEYFVDAKGLNIRPADVHPRATEHITDM 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++I+ AYVV+G+V+F K P YG+LS Q AG RV V+ KRNP DF
Sbjct: 122 IEFIKKLIDKGVAYVVDGNVYFDTSKFPQYGKLSHQDFNEIEAGARVEVNESKRNPMDFV 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWH+ECS MS YL DIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKAQKPGEPAWDSPWGMGRPGWHMECSVMSMKYLGDTIDIHGGGQDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ +W+HNG++ + +KMSKSLGNFFT+R I++ Y +R F++ +HYRSP+
Sbjct: 242 ESLTGKPLARFWLHNGYINVDGQKMSKSLGNFFTVRDISKEYDLETVRIFMLLSHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHA 375
N+S L+ A +A+ +Y + + L + + ++ IN + R +F
Sbjct: 302 NFSHQLLEQAKNALARLY----NVKFRLEDIKNSSDISAVSEQERAFINDMPRYRQKFIE 357
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD+NT+ + F A +N+L + S + + +KE+ ++
Sbjct: 358 AMDDDMNTASAMGVIFDLA-----KDVNILMADGASAEFAS------EASDMLKELTGVM 406
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL KD A + + ++ Q+I++R AR N+D++ +D+IR +L G
Sbjct: 407 GLL-----------YKDSACSQ---LDNEIEQMIQKRQQARANRDWATADRIRDELKAMG 452
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 453 IVLEDTPQGVRWK 465
>gi|418464825|ref|ZP_13035764.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756780|gb|EHK90937.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 459
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/494 (43%), Positives = 292/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IDIVQKLIQRGHAYVADNGDVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 242 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 302 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSALFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E++V + LI++R AR KD++ +D R LT
Sbjct: 394 L----------QLDPEQFLQAGSDEDEVAKIEALIKQRNEARAAKDWAAADAARNALTEM 443
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 444 GIVLEDGPNGTTWR 457
>gi|315652374|ref|ZP_07905363.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485348|gb|EFU75741.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 469
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 295/497 (59%), Gaps = 37/497 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+++++KE F PI GKV MYVCG T Y+L H+G+AR + FD + RY E+ EV
Sbjct: 1 MKIFNTLSRRKEEFVPIEEGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII +A + G + +S RY E DMA + LP T P + +E +
Sbjct: 61 NYVSNFTDVDDKIINKAIEEGVDAAVISQRYINECKKDMAAMNVLPATKNPLATQEIEGM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
+DMI ++I + AYV +G V+F V+ +YG+LS + ++ ++G R V + K +
Sbjct: 121 EDMIGKLIKSGHAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVTGEDGKEDS 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK K GEP W+SPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENE
Sbjct: 181 NDFVLWKPKKEGEPYWESPWSKGRPGWHIECSVMSKKYLGEQIDIHGGGEDLIFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS +A S +YWMHN + +N+KMSKS GNFFT+R I+E+Y LR F++SAHY
Sbjct: 241 IAQSESASGKSFANYWMHNAFLNIDNKKMSKSAGNFFTVRDISEKYDLQVLRFFMLSAHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA---EDCINKLRD 371
RSPLN+S +++A +++ I + + + ++ TA I A + L+D
Sbjct: 301 RSPLNFSAELMEAAKNSLERILTGMDNIKTVIA----RNNTAPITDAELSNLEIAKVLKD 356
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
+F M DD NT+ ++ F+ +K N++LN + S +E + + N ++ +
Sbjct: 357 KFADAMDDDFNTADAVSAIFE-LVKLSNTTLN----------ENSTVEYAKGLLNVIEPL 405
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LG++ ++ E+ + ++ LI R ARKNKDF+ +D+IR DL
Sbjct: 406 CDVLGIITE---------------RKTEILDSEIEDLIARRTQARKNKDFALADKIRNDL 450
Query: 492 TRKGIALMDMGKETIWR 508
KGI L D + W+
Sbjct: 451 LEKGIVLEDTREGVKWK 467
>gi|288550004|ref|ZP_05968971.2| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
gi|288316405|gb|EFC55343.1| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
Length = 465
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 287/493 (58%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 6 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L P +PR + H+ +I
Sbjct: 66 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNIQRPDSEPRATHHIHEI 125
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 126 IDITEKLIERGHAYVADNGDVMFSVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 246 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++ PAA + R F M
Sbjct: 306 LNYSEENLKQARSALERLYTALRGTDKSV-------------PAAGGEAFEAR--FVEVM 350
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 351 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 397
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q + + E QLI+ R AR+ KD++ +D R LT G
Sbjct: 398 LEQEPDAFLQSGAQADEGEVAEIE-------QLIKARLEARQAKDWAAADAARNRLTEMG 450
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 451 IILEDGPQGTTWR 463
>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372510|sp|Q7VMA0.1|SYC_HAEDU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 459
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 286/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL + +
Sbjct: 2 LKIYNTLKREKEEFKPINPAQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ +L R E D L + P +PR ++H+ +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNESCEALVERMIAEMHNDFDALNIMRPDVEPRATEHIAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F V YG LS Q L+ +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIMNGHAYVAADGDVMFDVTSFNQYGALSRQNLDQLQAGARVEIKSAKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKRSKENEPSWLSPWGNGRPGWHIECSAMNNKELGEHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A Q V+YW+H G +T + EKMSKS+GNFF+IR + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHQGEYVNYWLHTGMLTIDKEKMSKSVGNFFSIRHMLGLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS LD A A+ +Y L+ C++++ Q +G + F M
Sbjct: 302 LDYSTDNLDLARSALERLYTALRGCDLSV---QANGGENYVTA------------FKTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ A +N L K + +QQ +L L KE+ +LGL
Sbjct: 347 DDDFNTPAALAVLFEMA-----REVNKL-KTEDQQQANALAVCL-------KELAAVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L Q D LK ++ ++ LI++R A+ NK+++ +DQ+R L
Sbjct: 394 LT---------QDPDNFLKGEVNIDQTAEIEALIQQRNQAKANKNWAVADQVRGKLKAMN 444
Query: 496 IALMDMGKETIWR 508
I L D T+WR
Sbjct: 445 ILLEDTPTGTVWR 457
>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 505
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/497 (40%), Positives = 295/497 (59%), Gaps = 29/497 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN+M+ + E F PI GKV MYVCG T Y+ HLG+AR V FD+L RY ++ +V
Sbjct: 12 MNLYNTMSNKIEEFKPIEEGKVKMYVCGPTVYNYIHLGNARPVVIFDILARYFKYRGYDV 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTDVDDKII+RAN+ G +P ++ +Y Q + D L L +P+V+++M +I
Sbjct: 72 TYVQNFTDVDDKIIKRANEEGISPKEVTEKYIQGFFEDTELLNILQDIKRPKVTENMPEI 131
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I ++I N AY ++G+VFF V+K +YG+LS Q+++ G RV + K NP DFA
Sbjct: 132 IETIEKLIENGYAYEIDGNVFFDVKKYEDYGKLSNQKIDELEIGARVDIMEIKNNPLDFA 191
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS
Sbjct: 192 LWKKKKEGEPYWDSPWGQGRPGWHIECSAMSKKYLGETFDIHGGGQDLIFPHHENEIAQS 251
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+HNG V N +KMSKS GNFF +R+I ++ +R F++S HYR P+
Sbjct: 252 KCAYHGHFAKYWVHNGFVQVNGDKMSKSTGNFFLLREILGKFSGNVIRLFILSTHYRKPV 311
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE------ 372
N+S +++ + + +++ E +L K+ ++ + INK+ E
Sbjct: 312 NFSFEDMENTKKTLQNVISSIRRFEKSLEKLSSGIKSEDVSDEKINEINKVFKEKIKSFD 371
Query: 373 --FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK---KQPKQQQLSLIESL----RK 423
F M +D+NT L+ F D ++ N + ++K K+ L E+L +
Sbjct: 372 VKFIGAMDEDMNTPQALSTIF-DQIRETNRFCDDIEKILDKERNDSSFLLFEALELSYKN 430
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
++ ++++VL +L + +K + +L++ + LI+ R ARK K+FS
Sbjct: 431 LKTKIEDVLGVL-------------LMDEKKENKDDLSKNLIELLIKIRTEARKEKNFSL 477
Query: 484 SDQIRADLTRKGIALMD 500
SD+IR +L + G+ + D
Sbjct: 478 SDEIRDELKKIGVEIKD 494
>gi|402312548|ref|ZP_10831472.1| cysteine--tRNA ligase [Lachnospiraceae bacterium ICM7]
gi|400369006|gb|EJP22009.1| cysteine--tRNA ligase [Lachnospiraceae bacterium ICM7]
Length = 469
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 298/497 (59%), Gaps = 37/497 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+++++KE F PI GKV MYVCG T Y+L H+G+AR + FD + RY E+ +V
Sbjct: 1 MKIFNTLSKRKEEFVPIEEGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII +A + G + +S RY E DM + LP T P ++ + +
Sbjct: 61 NYVSNFTDVDDKIINKAIEEGVDASVISTRYINECKKDMEAMNVLPATKNPLATEEIGGM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
++MI+ +I+N AYV +G V+F V+ YG+LS + ++ ++G R V + K +
Sbjct: 121 EEMISTLIDNGHAYVAKDGTVYFRVKSFDGYGKLSHKNIDELQSGFREIKVTGEDGKEDS 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK K GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENE
Sbjct: 181 NDFVLWKPKKDGEPYWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDLIFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS +A S +YWMHN + +N+KMSKSLGNFFT+R I+E+Y LR F++SAHY
Sbjct: 241 IAQSESASGKSFANYWMHNAFLNIDNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRD 371
RSPLN+S ++++ +++ I +++ L Q+ ++ I A + L+D
Sbjct: 301 RSPLNFSAELMEASKNSLERILTGVEN----LKDVQKKNNSSPITDAELSNLEMAKVLKD 356
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
+F A M DD NT+ ++ F+ +K N+SLN + S +E + N ++ +
Sbjct: 357 KFVAAMDDDFNTADAISAIFE-LIKLSNTSLN----------ENSTLEYANGLLNIIEPL 405
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LG++ ++ E+ + ++ LIE+R ARKNKDF+ +D+IR DL
Sbjct: 406 CDVLGIITE---------------RKTEILDSEIEDLIEQRTQARKNKDFALADKIRNDL 450
Query: 492 TRKGIALMDMGKETIWR 508
+GI L D + W+
Sbjct: 451 LDRGIVLEDTREGVKWK 467
>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 473
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/491 (41%), Positives = 301/491 (61%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ + D A+L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIEAMNEDAANLGCAAPDEAPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI+ +++ AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MISNLVDKGAAYPASNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + +Q+ ++ + + + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFK-------AYQQTYGQKTVDALDQSFVER----FNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q L +LR++ N ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATVLYSTLRQLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ ++ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHDVDEFLKSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|354722388|ref|ZP_09036603.1| cysteinyl-tRNA synthetase [Enterobacter mori LMG 25706]
Length = 461
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/493 (45%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGYTL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV E GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IDITEKLIARGHAYVAENGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ T R PAA + R F M
Sbjct: 302 LNYSEENLKQARSALERLYTALR-------------GTDRSVPAAGGEAFEAR--FVEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI+ R AR+ KD++ +D R LT G
Sbjct: 394 LEQEPDAFLQSGAQADDGEVAEIE-------ALIKARLEARQAKDWAAADAARNRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|423614620|ref|ZP_17590477.1| cysteinyl-tRNA synthetase [Bacillus cereus VD107]
gi|401237464|gb|EJR43916.1| cysteinyl-tRNA synthetase [Bacillus cereus VD107]
Length = 465
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 296/495 (59%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++ D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDILD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--MEKFQVAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLEILFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|308070997|ref|YP_003872602.1| cysteinyl-tRNA synthetase [Paenibacillus polymyxa E681]
gi|305860276|gb|ADM72064.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Paenibacillus
polymyxa E681]
Length = 467
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 293/492 (59%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN+MT+ +E F P+ PGKV MYVCG T YD H+G+AR + FD++ YLE+L
Sbjct: 1 MPLQIYNTMTRSREPFAPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR+A +L + +++ ++ Y D+A L + PRV++ M+
Sbjct: 61 DVNYVVNFTDVDDKLIRKARELDMDVSAVAEKFIAAYYEDLAGLNVPAASMNPRVTESMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I ++++ AY +GDVF+ +K +YG+LSGQ LE + G R+ VD RK N D
Sbjct: 121 LIIDFIKELVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVDERKENAED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE W SPWG GRPGWHIECSAM+ HYL DIHGGG DL FPHHE E A
Sbjct: 181 FVLWKAAKPGEIHWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS YWMHNG++ +NEKMSKSLGN ++ + + P ALR+F++S HYR+
Sbjct: 241 QSEVITGKPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRAHHKPEALRYFMLSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLNY+ + A ++V I + + + L+ E ++ + ++ + +F +
Sbjct: 301 PLNYNQETMSQAENSVERIANAVANVKHRLANALE--GNGEVSTELQTKLDGILQQFGEK 358
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT +T F +++ + ++L++ Q +L +++ + + VLRI
Sbjct: 359 MNDDFNTPDAITAVFD----WVSEANHLLQRDVVHQAEL---QAVLHTFHSMNSVLRI-- 409
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
YSE EL ++++ QLI ER ARK K++S++D+IR L KGI
Sbjct: 410 ------YSE----------PSEELLDDEIEQLIAERVEARKTKNWSRADEIRDLLAAKGI 453
Query: 497 ALMDMGKETIWR 508
L D + WR
Sbjct: 454 VLEDTAQGMRWR 465
>gi|392538778|ref|ZP_10285915.1| cysteinyl-tRNA ligase [Pseudoalteromonas marina mano4]
Length = 459
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 282/494 (57%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ +
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ E+ L+ R + D L L P +P V+ HM +I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMGEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R + + Y P ++R+FLIS HYRS
Sbjct: 242 SCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D + P + E N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRD----VKPIE-----------CELESNEFVIKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + LN +K+ Q QL+ I ++ + +LG
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAFI---------LRTIGEVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
V QQ + L+ + E + LI +R AR +KD++ +D+ R L
Sbjct: 393 ---------VAQQAPEAFLQGGQDDNEVATIEALIVKRNEARASKDWAAADEARDALNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 444 GVILEDSAGKTTWR 457
>gi|423393457|ref|ZP_17370683.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
gi|423421744|ref|ZP_17398833.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401096863|gb|EJQ04900.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401629564|gb|EJS47377.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
Length = 465
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/498 (41%), Positives = 291/498 (58%), Gaps = 41/498 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE + K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--MEKFQVAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT++ +T + A Q L E K+
Sbjct: 355 EEAMDDDFNTANAITELYNVA---------------NHANQYLLEEHTSKV--------- 390
Query: 434 ILGLLPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
GAY + L+ L D L + EL +E++ LI++R ARKN+DF+ SDQIR D
Sbjct: 391 -----VIGAYVKQLETLFDILGLELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDD 445
Query: 491 LTRKGIALMDMGKETIWR 508
L + I L D + T W+
Sbjct: 446 LKDRNIILEDTAQGTRWK 463
>gi|255527266|ref|ZP_05394147.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296187245|ref|ZP_06855641.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255509051|gb|EET85410.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048116|gb|EFG87554.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 465
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/492 (39%), Positives = 300/492 (60%), Gaps = 31/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K++N++ ++KE F P+ +V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVFNTIARKKEEFIPLSEKEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RA + L +++ +EY D L T PR ++++ +I
Sbjct: 61 KFIQNFTDIDDKMIKRAKEDNITVKELGDKFIEEYYKDADSLNIERATVNPRATEYINEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D + ++I+ AY V+GDV+F +K +YG+LSGQ LE+ +AG R++VD RK++P DFA
Sbjct: 121 VDFVKELIDRGYAYEVDGDVYFHTKKFKDYGKLSGQNLEDLQAGARISVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENE+AQS
Sbjct: 181 VWKSQKPGEPAWKSPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLAFPHHENEVAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YWMH+ V NNEKMSKSL NFFT R+I E+Y +R F++S HYR+ +
Sbjct: 241 EARTGKTFAKYWMHSAFVNVNNEKMSKSLNNFFTAREILEKYDSDVIRLFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHAR 376
N+S+ L+S A+ +Y ++ + E S +E + ++ E ++ ++++ +
Sbjct: 301 NFSMESLESMKAAMDRLYNSISNLE---SLLEETKQEELMDQEVEYIKILDGYKEKYIEK 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ ++ F D ++ IN+++ + K+ + L+LI+ L K
Sbjct: 358 MDDDFNTADAVSVIF-DLIRDINTNVKIDSSKKLIKHCLNLIKELGK------------- 403
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
P G +LQ+ K L EE + LIEER ARK+K+++ SD+IR DL +GI
Sbjct: 404 --PLG----ILQKSKKGNL------EEKIEALIEERQQARKDKNWALSDKIRDDLKEQGI 451
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 452 LLEDTPQGVRWK 463
>gi|170025371|ref|YP_001721876.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|229558805|sp|B1JHJ1.1|SYC_YERPY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169751905|gb|ACA69423.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
Length = 461
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---VEFEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKLAQVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR +KD++ +D R L G
Sbjct: 394 LEQDPELFLQGGAQADDDEVAKIE-------ALIKQRNDARSSKDWALADAARDQLNDLG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|307243392|ref|ZP_07525549.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
gi|306493202|gb|EFM65198.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
Length = 467
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 287/493 (58%), Gaps = 31/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+MT++KE F P+ GKV MYVCG T Y+ HLG+AR FD L RY E+ EV
Sbjct: 1 MKIYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY++NFTDVDDKII+R+++ G +P ++ +Y +EY +D L T P+V+D+++ I
Sbjct: 61 TYIQNFTDVDDKIIKRSHEEGISPEEVAEKYIKEYFIDCDGLGIKRATVHPQVTDNIDNI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ +I+ AY GDV F K YG+LS Q +E G R+ VD +K +P DF
Sbjct: 121 IVFVQDLIDKGYAYEAGGDVLFRTRKFKEYGKLSHQNIEELELGARIDVDDKKEDPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP W SPWG GRPGWHIECS MS YL + DIH GG DL FPHHENEIAQS
Sbjct: 181 LWKAKKEGEPGWQSPWGEGRPGWHIECSVMSNRYLGNTIDIHAGGQDLQFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+ YWMHNG++ + EKMSKSLGNFFT+R I+ +Y +R FL++ YR+P+
Sbjct: 241 ECRNGHTFARYWMHNGYINVDGEKMSKSLGNFFTVRDISNKYDLGLVRFFLLATQYRNPV 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI---NKLRDEFHA 375
N+S L+ A + + + E L + + + +D + +K R+ F
Sbjct: 301 NFSDTVLEQAKAGLERLTNARDNAEFILGNLAD----SSLRDEEKDMVAGLDKYRERFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLNT+ ++ F+ A KF+N++++ K+ Q L + NE+ VL I
Sbjct: 357 AMDDDLNTADAISVIFELA-KFMNTNISDQSSKEFVQLNLDIF-------NELTGVLNI- 407
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+K+++ + + V LI +RA A+K K+F+ +DQIR +LT G
Sbjct: 408 ---------------ANKSVEEDDSLSQKVEDLIAKRAQAKKEKNFALADQIRDELTAMG 452
Query: 496 IALMDMGKETIWR 508
IA+ D + W+
Sbjct: 453 IAIEDTRQGVKWK 465
>gi|406040789|ref|ZP_11048144.1| cysteinyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 473
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/491 (42%), Positives = 297/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P V G++ +YVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRVDGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE L+ R+ D A L C P P+ +++++Q+++
Sbjct: 66 IRNITDIDDKIISRANENGETIQQLTARFITAMNEDAASLGCAEPDESPKATEYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++ N AY GDV++ V K YGRLSG++L++ +AG ERV V+ K++P DF
Sbjct: 126 MIGTLVENGTAYPSSNGDVYYEVTKFAKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKA EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKANEPSWQSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A A+ Y + E Q +G+ ++ ++ + F++ M
Sbjct: 306 VNFSDTALKEAKTALTRFYHAFKAYE------QTYGQI-----HSDQLDHEFIERFNSAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F +N LN K+Q +Q +LR + ILGL
Sbjct: 355 RDDFNTPEAMAVLFD-----LNRELNRAVKEQCAEQAALYYATLRHLTT-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L ++++ LI++R A+K KDF+K+D IR L KG+A
Sbjct: 403 VQHNVDEFLKSDIGQQALS---LNDDEIEALIQQRHDAKKAKDFAKADGIRQSLLEKGVA 459
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 460 LEDTRQGTVWR 470
>gi|350424873|ref|XP_003493941.1| PREDICTED: cysteinyl-tRNA synthetase-like [Bombus impatiens]
Length = 463
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/496 (44%), Positives = 280/496 (56%), Gaps = 44/496 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE F PI P KVGMYVCGVT YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEAFNPIHPNKVGMYVCGVTIYDLCHIGHGRTFVAFDVVSRYLRFLGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE+ L+ R E D L P +PR + HM I
Sbjct: 62 TYVRNITDVDDKIIKRARENGESCQQLTERMLTEMYRDFDALNIQRPDQEPRATAHMADI 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I AYV GDV F+VE +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVNTLIKRGHAYVATNGDVMFSVESDNHYGLLSRQNLEQLQAGARVEVTEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM+ + L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNNNVLGHHFDIHGGGADLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V ++EKMSKSLGNFFTIR + + Y ++R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDHEKMSKSLGNFFTIRDVLKHYDAESVRYFLLSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ Y L+D +Q+ N F M
Sbjct: 302 LNYSEENLKQARIALERWYTALRDTHNVEMDYQD---------------NPYYHRFCMAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSL---NMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
+DD NT + F D IN + N+LK Q LR + N V
Sbjct: 347 NDDFNTPEAYSVLF-DLASEINKAKAEDNLLKANQSATL-------LRYLANNV------ 392
Query: 435 LGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
LGLL P A+ LQ D E+ + LI++R AR K+++ +D R L
Sbjct: 393 LGLLTQDPQAF---LQGKND------EVDVAHIEALIKQRNEARATKNWALADAARDQLN 443
Query: 493 RKGIALMDMGKETIWR 508
+ I L D T WR
Sbjct: 444 QLNIVLEDGPTGTTWR 459
>gi|292487539|ref|YP_003530411.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
gi|428784474|ref|ZP_19001965.1| cysteine tRNA synthetase [Erwinia amylovora ACW56400]
gi|291552958|emb|CBA20003.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
gi|426276036|gb|EKV53763.1| cysteine tRNA synthetase [Erwinia amylovora ACW56400]
Length = 502
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/496 (42%), Positives = 288/496 (58%), Gaps = 43/496 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 42 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 101
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ GE+ L+ R E D A L LPP +PR + H+ +I
Sbjct: 102 NYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHIAEI 161
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ YG LS Q L+ +AG RV V + KRNP D
Sbjct: 162 IELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTADVKRNPMD 221
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 222 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 281
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS +A V+YWMH+G V + EKMSKSL NFFT+R + E Y +R+FL+S HYRS
Sbjct: 282 QSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVRYFLMSGHYRS 341
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L+ A A+ +Y L++ + +P AR F A
Sbjct: 342 QLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEAR---------------FRAA 386
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F + +N +K + P + ++ L LR+L
Sbjct: 387 MDDDFNTPEAYSALFD-----LAREVNRMKAENP-----AAVDGL-------AARLRVL- 428
Query: 437 LLPPGAYSEVLQQLKDKALKR-AELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
G +L+Q ++ L+ A + +E+V Q LI+ R ARK K+++++D R L
Sbjct: 429 ----GGVLGLLEQDPEQFLQSGANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLN 484
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 485 EMGIVLEDGAGGTRWR 500
>gi|292898782|ref|YP_003538151.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|291198630|emb|CBJ45738.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
Length = 462
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/496 (42%), Positives = 288/496 (58%), Gaps = 43/496 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ GE+ L+ R E D A L LPP +PR + H+ +I
Sbjct: 62 NYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ YG LS Q L+ +AG RV V + KRNP D
Sbjct: 122 IELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTADVKRNPMD 181
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 182 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 241
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS +A V+YWMH+G V + EKMSKSL NFFT+R + E Y +R+FL+S HYRS
Sbjct: 242 QSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVRYFLMSGHYRS 301
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L+ A A+ +Y L++ + +P AR F A
Sbjct: 302 QLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEAR---------------FRAA 346
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F + +N +K + P + ++ L LR+L
Sbjct: 347 MDDDFNTPEAYSALFD-----LAREVNRMKAENP-----AAVDGL-------AARLRVL- 388
Query: 437 LLPPGAYSEVLQQLKDKALKR-AELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
G +L+Q ++ L+ A + +E+V Q LI+ R ARK K+++++D R L
Sbjct: 389 ----GGVLGLLEQDPEQFLQSGANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLN 444
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 445 EMGIVLEDGAGGTRWR 460
>gi|288554704|ref|YP_003426639.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
gi|288545864|gb|ADC49747.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
Length = 465
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/492 (39%), Positives = 291/492 (59%), Gaps = 29/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++YNS+T++KE F P+ GKV MYVCG T Y+ H+G+AR + +D++ RYLE+
Sbjct: 1 MAIQLYNSLTKKKETFVPMEEGKVKMYVCGPTVYNYIHIGNARPPIVYDMVRRYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV ++ NFTDVDDKIIR A++LGE+ +++NR+ +EY D L PRV++ +
Sbjct: 61 EVEFISNFTDVDDKIIRAAHELGEDVFAVANRFIEEYHNDTCALGVKKANKHPRVTETIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + + ++I + AY GDV+F +K YG+LS Q +++ R+G R+ VD RK +P D
Sbjct: 121 EIIEFVAKLIEKEYAYESGGDVYFRTKKFEGYGKLSSQSIDDLRSGARIEVDERKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE SW+SPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIA
Sbjct: 181 FVLWKAAKEGEVSWESPWGDGRPGWHIECSAMVKKYLGDTIDIHAGGKDLSFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YWMHNG + NNEKMSKSLGNF I ++ +R F+++AHYRS
Sbjct: 241 QSEALTGKTMANYWMHNGFININNEKMSKSLGNFVLAHDIIRQHSAEVVRFFMLTAHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N+S LD A + + + + E L ++G+ A I++L++ F
Sbjct: 301 PINFSDELLDGAKNGLERLRTAVSSLEHRLGESADYGEKAEWLTK----ISQLKEAFIKE 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD N+++ + F D K N L + +Q ++ + + +E+ +VL I+
Sbjct: 357 MDDDFNSANGIAVMF-DLAKEANRYL------REEQTSKEVLHAFIDLFDELADVLGIV- 408
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+AEL + ++ LIEER R++++F ++D+IR L +GI
Sbjct: 409 -----------------VRTQAELLDTEIEALIEERNETRRSRNFKRADEIRDQLKDQGI 451
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 452 LLEDTAQGVRWK 463
>gi|262276150|ref|ZP_06053959.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
gi|262219958|gb|EEY71274.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
Length = 461
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 291/493 (59%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE F PI PGKVGMYVCGVT YDL H+GH R VSFD++ RYL +L ++
Sbjct: 2 LKIYNSLTKQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ +L+ R E D L P +PR + ++ +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCEALTERLIGEMYADFDALNMKRPDIEPRATQYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I+ AYV GDV F V K YG+LS Q LE +AG RV V+ K++P DF
Sbjct: 122 IALVERLIDRGFAYVASNGDVLFEVAKFDEYGKLSRQDLEQLQAGARVDVEEAKKSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y +L+ + +++ E G+ + F A M
Sbjct: 302 LNYSEENLKQARASMERLYTSLRGLDTSVAA--EGGEA-------------FVERFKAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + K+ ++E+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKAED--------VAAASKLAARMRELAEVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + + D + E LI+ R AR NKD++ +D R LT G
Sbjct: 394 LEQDPEAFLKGNTEGGDDEVAEIE-------ALIKARNDARANKDWAAADAARDALTAMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGAQGTTWR 459
>gi|307729279|ref|YP_003906503.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307583814|gb|ADN57212.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 479
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/502 (43%), Positives = 293/502 (58%), Gaps = 40/502 (7%)
Query: 12 APKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYL 71
AP +L+IYN++ + K+ F P+ PG V MYVCG+T YD H+GHAR V FD++ R+L
Sbjct: 11 APFSMESLRIYNTLARDKQTFVPLEPGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWL 70
Query: 72 EHLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRV 131
L +VTYVRN TD+DDKIIRRA + GE SL++R+ Q D L P +PR
Sbjct: 71 RTLGYQVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIQALHEDADALGIARPDMEPRA 130
Query: 132 SDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR 190
+D + Q+ MI ++ AY +GDV +AV K YG+LSG+ LE+ RAGERVA +
Sbjct: 131 TDFIPQMLGMIEKLEEKGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDA 190
Query: 191 KRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 247
K +P DF LWK +KA EP+ WDS +G GRPGWHIECSAM L +FDIHGGG DL
Sbjct: 191 KEDPLDFVLWKQSKADEPADTGWDSRYGRGRPGWHIECSAMGCTLLGERFDIHGGGQDLQ 250
Query: 248 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 307
FPHHENEIAQS AA V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y +R
Sbjct: 251 FPHHENEIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 310
Query: 308 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 367
F+ AHYRSPLNYS + +D A +A+ +Y L+D ++P + AA D
Sbjct: 311 FIARAHYRSPLNYSDVHIDDARNALGRLYTALKD----VTP----------DGAALDWNE 356
Query: 368 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
F A M+DD NT ++ F+ L + + + +L LR +
Sbjct: 357 AHAQRFQAAMNDDFNTPVAVSVLFE------------LATEVNRTRDPALARQLRSL--- 401
Query: 428 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
VL +LG P + AL+ A + + I ER AA++ KD++ +D+I
Sbjct: 402 -GAVLGLLGREPRAYLQQAAGAAVQGALEPAAIEAK-----IAERVAAKQAKDYAAADRI 455
Query: 488 RADLTRKGIALMDM-GKETIWR 508
RA+L G+AL D G T WR
Sbjct: 456 RAELLEAGVALEDKPGGLTEWR 477
>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
Length = 699
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/505 (42%), Positives = 283/505 (56%), Gaps = 54/505 (10%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYLLTY 289
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 350 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 409
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 410 WKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 469
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P
Sbjct: 470 GASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPE 529
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A +P
Sbjct: 530 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPS 576
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
+ + F+ M+DD +T + F+ L + K L L+
Sbjct: 577 EADDDYTRRFYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNDAQLAGCLKA 624
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
+ I+GLL +E LQ L+ E++ LI R AR +K++++
Sbjct: 625 LGG-------IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAE 672
Query: 484 SDQIRADLTRKGIALMDMGKETIWR 508
SD+IR L I L D T WR
Sbjct: 673 SDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|365966530|ref|YP_004948092.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745443|gb|AEW76348.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 469
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 292/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+ A + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKHALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E++V + LI++R +R KD++ +D R LT
Sbjct: 404 L----------QLDPEQFLQAGSDEDEVAKIEALIKQRNESRATKDWAAADAARNALTEM 453
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 GIILEDGPNGTTWR 467
>gi|411117203|ref|ZP_11389690.1| cysteinyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
gi|410713306|gb|EKQ70807.1| cysteinyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
Length = 495
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/502 (41%), Positives = 300/502 (59%), Gaps = 21/502 (4%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L IYN++T++KE FT I PGKV MYVCGVT YD HLGHAR+ + +D++ RYL+
Sbjct: 1 MSLMIYNTLTRKKEPFTTIEPGKVRMYVCGVTVYDYCHLGHARSYIVWDMVRRYLQWRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV+NFTD+DDKIIRR+ + ++++Y YL DM L LP P+ ++ +
Sbjct: 61 DVCYVQNFTDIDDKIIRRSQEENLPWQDITHKYIDAYLEDMKRLNILPAVAYPKATEVIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD----SRKR 192
QI D I ++I+ AY +GDV++AVEK P YG+LSG++L+ AG VD ++KR
Sbjct: 121 QIIDFIKRLIDQGYAYAADGDVYYAVEKFPPYGKLSGRKLDQMEAGASGRVDEEAETKKR 180
Query: 193 NPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
+P DFALWKAAK GEP W+SPWG GRPGWHIECSAM L + DIH GG DL+FPHHE
Sbjct: 181 HPLDFALWKAAKPGEPEWESPWGMGRPGWHIECSAMVKELLGDRIDIHTGGEDLVFPHHE 240
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS AA ++W+HNG V +KMSKSL NF TIR + E P+ +R F++ A
Sbjct: 241 NEIAQSEAALAKPLSTFWLHNGFVKIRGDKMSKSLKNFTTIRSLLETTDPMVVRLFVLQA 300
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 372
HYRSP++++ D A A ++T+ + + F + P D + R
Sbjct: 301 HYRSPIDFT----DEAIAAAENGWKTISEALESFKKFSRLPDWSTYYPGNLDSVYVER-- 354
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F+ M DD NT L+ F+ A + + + +P + + E + + ++L
Sbjct: 355 FNEAMDDDFNTPVALSVIFELAKELRREQNLLTHQGKPGKSTKQIAEYCQTL----AQLL 410
Query: 433 RILGLL---PPGAYSEV---LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 486
ILGL P +E + + + + E+T+ +V L+++R ARK K++++SD+
Sbjct: 411 NILGLKAEDPAPIVAERGLGISRGDVVIISKTEMTDAEVDALVQQRNEARKAKNWAESDR 470
Query: 487 IRADLTRKGIALM-DMGKETIW 507
IR +L KGI L+ D G T W
Sbjct: 471 IRNELQEKGITLIDDKGGVTRW 492
>gi|332526279|ref|ZP_08402408.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
gi|332110113|gb|EGJ10741.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
Length = 457
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/501 (42%), Positives = 292/501 (58%), Gaps = 57/501 (11%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL+++N++T++ E F P+ PG+V MYVCG+T YDL H+GHAR ++FD++YR+L+
Sbjct: 1 MTLRLHNTLTRRLETFVPLEPGRVRMYVCGITVYDLCHMGHARMNLAFDVVYRWLKASGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRN TD+DDKIIRRA + G +L++ D A L PPT++PR ++ +
Sbjct: 61 EVTYVRNITDIDDKIIRRALERGVGIRALTDEMVAAMHRDFAALGLEPPTHEPRATEFVP 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
Q+ D+I ++ N AY E GDV FAV + P YG+LSG+ L+ RAGERVAV K +P
Sbjct: 121 QMLDIIGRLERNGLAYRAEDGDVNFAVRRFPGYGKLSGKSLDELRAGERVAVAGGKEDPL 180
Query: 196 DFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHE 252
DF LWK+AK EP+ WDSP+G GRPGWHIECSAMS L +FD+HGGG+DL FPHHE
Sbjct: 181 DFVLWKSAKPEEPAEAKWDSPFGAGRPGWHIECSAMSCALLGERFDLHGGGMDLQFPHHE 240
Query: 253 NEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 312
NEIAQS A V+YW+HNG + +NEKMSKSLGNFFTI + +++ +R F++
Sbjct: 241 NEIAQSEGAFGHPFVNYWLHNGFLNVDNEKMSKSLGNFFTIADVLKKFDGETVRFFMLRT 300
Query: 313 HYRSPLNYSVLQLDSASDAVFYIYQTLQD-----CEVALSPFQEHGKTARINPAAEDCIN 367
HYRSP N++ LD A A+ +Y L CEV S +P A
Sbjct: 301 HYRSPFNFADSLLDEARAALRRLYTALDGADAVACEVDWS-----------DPRAA---- 345
Query: 368 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
F A M DD NT L F+ A +F S + + L+ SL
Sbjct: 346 ----AFKAAMDDDFNTPGALAVLFELANEFNRSRDAAMAR---------LLVSL------ 386
Query: 428 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAE-LTEEDVLQLIEERAAARKNKDFSKSDQ 486
GA +LQQ L+ + + ++ + IE RA A++ + F+ +D+
Sbjct: 387 -------------GAVLGILQQAPRAFLQAGTGVDDAEIARQIEARATAKRERRFADADR 433
Query: 487 IRADLTRKGIALMDMGKETIW 507
IRA+L +G+ L D + T W
Sbjct: 434 IRAELAAQGVELKDTPQGTTW 454
>gi|423680487|ref|ZP_17655326.1| cysteinyl-tRNA synthetase [Bacillus licheniformis WX-02]
gi|383441593|gb|EID49302.1| cysteinyl-tRNA synthetase [Bacillus licheniformis WX-02]
Length = 467
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/496 (40%), Positives = 285/496 (57%), Gaps = 37/496 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL +YN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + +YLE+
Sbjct: 1 MTLTLYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+I+ AN+ GE ++ R+ + Y D+ L C PRV+++M+
Sbjct: 61 EVQYVSNFTDVDDKLIKAANEHGEEVPVIAERFIKAYFEDVGSLGCTKADCHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I D I +I+ AY +GDV++ YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 EIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK E SWDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YW+HNG++ +NEKMSKSLGNF + I + + P LR F++S HYR
Sbjct: 241 QSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKEHDPQVLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKL---RDE 372
P+NYSV L++ +A + A S Q K++ + + + K+ R
Sbjct: 301 PINYSVELLENTKNA-------FGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIEEQRKA 353
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT++ ++ F D K N L Q K +I++ ++ E+
Sbjct: 354 FQTAMDDDFNTANAISVLF-DLAKHANYYL------QEKNTAEHVIQAFIQL---FDEIC 403
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LG +LK EL ++D+ +LIE+R AR+N+DF+ SDQIR L
Sbjct: 404 SVLGF----------------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQIRDQLK 447
Query: 493 RKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 448 SMNIILEDTPQGTRWK 463
>gi|359449072|ref|ZP_09238573.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
gi|358045104|dbj|GAA74822.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
Length = 459
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/494 (43%), Positives = 282/494 (57%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ +
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ E+ L+ R + D L L P +P V+ HM +I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMGEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGARVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R + + Y P ++R+FLIS HYRS
Sbjct: 242 SCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D + P + E N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRD----VKPIE-----------CELESNEFVIKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + LN +K+ Q QL+ I ++ + +LG
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAFI---------LRTIGEVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
V QQ + L+ + E + LI +R AR +KD++ +D+ R L
Sbjct: 393 ---------VAQQAPEAFLQGGQDDNEVATIEALIVKRNEARASKDWAAADEARDALNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 444 GVILEDSAGKTTWR 457
>gi|251788870|ref|YP_003003591.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
gi|247537491|gb|ACT06112.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
Length = 461
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/493 (42%), Positives = 281/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+NR E D L L P +PR + ++ +I
Sbjct: 62 KYVRNITDIDDKIIKRATENGETIEQLTNRMIGEMHTDFQALNILSPDEEPRATHYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF
Sbjct: 122 IELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLDQLKAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + Y +R+FLIS HYRS
Sbjct: 242 STCAHGGDYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLTHYDAETIRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A ++ +Y L+ + + S R A M
Sbjct: 302 LNYTEENLKQARASLERLYTALRGTDASASAAGGEAFERRFRDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + ++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKAEDAAAANGL--------AAMLRQLAGVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D ++ E LI++R AR++KD++ +D R LT G
Sbjct: 394 LECDPELFLQSGAQADDGEVQEIE-------ALIKQRNDARQSKDWALADAARNRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDGPQGTIWR 459
>gi|339325369|ref|YP_004685062.1| cysteinyl-tRNA synthetase [Cupriavidus necator N-1]
gi|338165526|gb|AEI76581.1| cysteinyl-tRNA synthetase CysS [Cupriavidus necator N-1]
Length = 462
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/500 (43%), Positives = 286/500 (57%), Gaps = 53/500 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++ ++K+ F PI PGKV MYVCG+T YD H+GHAR V FD+++R+L EV
Sbjct: 4 LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+N TD+DDKIIRRA + GE L+ R+ Q D A L + P ++PR +D++ Q+
Sbjct: 64 TYVQNITDIDDKIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI ++ AY +GDV ++V K YG+LSG+ LE+ RAGERV+ + K++P DF
Sbjct: 124 LDMIGKLEARGLAYQASDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVSANDAKQDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AKA EP WDS WG GRPGWHIECSAMS L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y +R F++ AHY
Sbjct: 244 IAQSEGASGKPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+D + P C DE H
Sbjct: 304 RSPLNYSDAHLDDARHALTRLYTALKDSQ----------------PGG--CAVDW-DEPH 344
Query: 375 AR-----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
AR M DD NT ++ F D IN + + +Q +K
Sbjct: 345 ARRFAEAMGDDFNTPIAMSVLF-DLASEINRTGSTAAARQ------------------LK 385
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+ LGLL ++ + D ++ E + LI R A+ ++F+++D+IRA
Sbjct: 386 ALAGTLGLLERDPHTFLQGGRSDDG-----ISPEQIETLIAARKTAKLERNFAEADRIRA 440
Query: 490 DLTRKGIALMDM-GKETIWR 508
L GI L D G T WR
Sbjct: 441 QLLEAGIVLEDKPGGATEWR 460
>gi|345018555|ref|YP_004820908.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939598|ref|ZP_10305242.1| cysteinyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
gi|344033898|gb|AEM79624.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291348|gb|EIV99791.1| cysteinyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
Length = 466
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/493 (41%), Positives = 287/493 (58%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++++ KE P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ +V
Sbjct: 1 MKLYNTLSRTKEELEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII+RA + ++ +Y EY D +L T P+ ++H+E I
Sbjct: 61 NYVQNFTDIDDKIIKRAQEENVTTKEVAEKYIDEYFKDADNLGIKRATVHPKATEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ AYVV G+V+F K +YG+LS + +E +AG R+ ++ K+NP DF
Sbjct: 121 IEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEEKKNPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG DL+FPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA + YWMH G++ NNEKMSKS GNFFT+R+ITE+Y+P LR F++ AHYRSP+
Sbjct: 241 EAAYEQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVLRLFMLMAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-- 376
N+S+ ++ A+ A Y+ L + L K +N + + K +
Sbjct: 301 NFSLDLMEQANSA----YERLLNAVANLKHLANVCKDGGLNEEEKKLMEKFEEYKKEFEE 356
Query: 377 -MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ A K N++L+ K+ + L + L + +L
Sbjct: 357 AMDDDFNTADAISVLFEMA-KTSNANLSRNSSKKLVEYILDMFLKLSE----------VL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL G EL +E++L LIEER ARK K++ +D+IR L KG
Sbjct: 406 GLSYRGV--------------ETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKG 451
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 452 IILEDTPEGVRWK 464
>gi|312171645|emb|CBX79903.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
Length = 507
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/496 (42%), Positives = 288/496 (58%), Gaps = 43/496 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI GK+GMYVCG+T YDL H+GH R +FD++ RYL + ++
Sbjct: 47 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 106
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA++ GE+ L+ R E D A L LPP +PR + H+ +I
Sbjct: 107 NYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHIAEI 166
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPAD 196
+++ ++I + AYV GDV F+V+ YG LS Q L+ +AG RV V + KRNP D
Sbjct: 167 IELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTADVKRNPMD 226
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWK +KA EP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIA
Sbjct: 227 FVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIA 286
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS +A V+YWMH+G V + EKMSKSL NFFT+R + E Y +R+FL+S HYRS
Sbjct: 287 QSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVRYFLMSGHYRS 346
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
LNY L+ A A+ +Y L++ + +P AR F A
Sbjct: 347 QLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEAR---------------FRAA 391
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT + F + +N +K + P + ++ L LR+L
Sbjct: 392 MDDDFNTPEAYSALFD-----LAREVNRMKAENP-----AAVDGL-------AARLRVL- 433
Query: 437 LLPPGAYSEVLQQLKDKALKR-AELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
G +L+Q ++ L+ A + +E+V Q LI+ R ARK K+++++D R L
Sbjct: 434 ----GGVLGLLEQDPEQFLQSGANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLN 489
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 490 EMGIVLEDGAGGTRWR 505
>gi|407789635|ref|ZP_11136735.1| cysteinyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
gi|407206295|gb|EKE76253.1| cysteinyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
Length = 457
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 289/491 (58%), Gaps = 38/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N+++++KE F P+VPGKV +YVCG+T YDL H+GHAR V+FD++ RYL H +V
Sbjct: 2 LKVFNTLSREKETFQPLVPGKVSLYVCGITIYDLMHIGHARTYVAFDVINRYLRHKGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RAN+ GE+ +L+ R+ D A L LPP +P+V+ HM+ I
Sbjct: 62 TYVRNITDVDDKIIKRANENGESCEALTERFATLMREDFAALNTLPPDIEPKVTTHMDDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ +++ AY + GDV F V+ YG+LS Q L+ +AG RV V+ KR+P DF
Sbjct: 122 IQMVKALVDRGHAYQADNGDVLFEVKSFEQYGQLSRQDLDALQAGARVDVEDAKRDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKQAKPGEPKWASPWGEGRPGWHIECSAMSSRHLGPVFDIHGGGSDLTFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A YW+H+G V N EKMSKSLGNFFT+R + + + +R+FL+++HYRS
Sbjct: 242 SCCASGQQFARYWLHSGMVQVNKEKMSKSLGNFFTVRDVLKVFDAETVRYFLLTSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ G +A A + F A M
Sbjct: 302 LNYSEDNLNQAKAALERLYTALK------------GVSAEAELAGD-----WAARFDAAM 344
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ + LN + KQ+ + + SL + +L ++
Sbjct: 345 DDDFNTPEALVVLFE-----LARELN-----KAKQEGRADVASLAATLKHLGGLLGVVQQ 394
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
P E Q D+ L A + LI +R AR+++D++ +D R LT G+
Sbjct: 395 AP-----EAFLQGGDEDLDVAHIE-----GLIAKRNQARQDRDWAAADAARDALTALGVV 444
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 445 LEDGPQGTSWR 455
>gi|383935040|ref|ZP_09988478.1| cysteinyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
gi|383703805|dbj|GAB58569.1| cysteinyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
Length = 459
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/496 (45%), Positives = 296/496 (59%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN+++++KELFTPIVPGK G+YVCG+T YD H+GHAR V+FD++ RYL L +V
Sbjct: 2 LQIYNTLSRKKELFTPIVPGKAGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E+ +L+ R+ + D L +P +PRV+ HM +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNESCDALTARFTKAMHADFNALGLMPADIEPRVTTHMAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI Q++ AYV +GDV F V K YG LS Q L+ +AG RV V K +P DF
Sbjct: 122 IQMIEQLLAKGYAYVAADGDVLFDVSKYEAYGELSQQNLDMLQAGARVNVAENKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP W SPWG GRPGWHIECSAMSA +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ W+H G V + EKMSKSLGNFFT++ + +Y+ A+R+FL+S+HYRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKDVLAQYNAEAVRYFLLSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L++ I PAA+ D + F A
Sbjct: 302 LNYSAENLEQAHAALGRLYTALRN----------------ITPAADVDLQSDYIARFKAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F+ + +N K+ +P K +L+ + SL + +L
Sbjct: 346 MDDDFNTPEALPVLFE-----LAREVNRFKETEPAKAAELAGVLSL---------LAGVL 391
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
GLL G + LQ + +++DV + LI +R AR NKD++ +D R LT
Sbjct: 392 GLL-QGDAEQFLQ---------SGTSDDDVAEIEALIAQRNTARANKDWAAADAARDALT 441
Query: 493 RKGIALMDMGKETIWR 508
KGI + D T WR
Sbjct: 442 AKGIIVEDKNGVTSWR 457
>gi|291522471|emb|CBK80764.1| cysteinyl-tRNA synthetase [Coprococcus catus GD/7]
Length = 466
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/494 (40%), Positives = 288/494 (58%), Gaps = 36/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N++T++K+ F P+ GKV MYVCG T Y+ H+G+AR + FD + RY E+ +V
Sbjct: 1 MKIFNTLTRRKDEFVPLEEGKVRMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++AN+ G + +S R+ +E DMAD+ T+ P+ ++ ++ +
Sbjct: 61 NYVSNFTDVDDKIIKKANEEGVDASVISERFIKEAQKDMADMNVKEATHHPKATEEIDGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
DMI ++N AY V+G V+F +YG+LS + +++ AG R V + K +P
Sbjct: 121 IDMIQTLVNKGHAYAVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVNGEEGKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEPSW SPWG GRPGWHIECS MS YL + DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEPSWPSPWGDGRPGWHIECSVMSKKYLGEQIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
AQS AC D + YWMHNG + NN KMSKSLGNFFT+R+I E+Y LR F++SAHY
Sbjct: 241 AQS-EACNDKEFAHYWMHNGFLNINNVKMSKSLGNFFTVREIAEKYDLQVLRFFMLSAHY 299
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEF 373
RSPLN+S ++++ + + I + L G T + + L ++
Sbjct: 300 RSPLNFSAELMEASRNGLERILTAID----RLRTLNLQGDTCTAEENEQMKVFDALVAKY 355
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
A M DD NT+ ++ F+ M+K + S +I +E+ +
Sbjct: 356 EAAMEDDFNTADAISAIFE-----------MVKAANIHVTETSTAAFRDQILSEIVRLCD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
+LG+ K K+ EL ++++ LI+ER AARK K+F+++D+IR +L
Sbjct: 405 VLGI---------------KTEKKEELLDDEIQALIDERQAARKAKNFARADEIRDELLA 449
Query: 494 KGIALMDMGKETIW 507
KGI L D + W
Sbjct: 450 KGIILKDTREGVKW 463
>gi|209363819|ref|YP_001423944.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212212147|ref|YP_002303083.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212219210|ref|YP_002305997.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
gi|215919193|ref|NP_820470.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|218511865|sp|Q83BL7.2|SYC_COXBU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206584077|gb|AAO90984.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|207081752|gb|ABS78112.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212010557|gb|ACJ17938.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212013472|gb|ACJ20852.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
Length = 460
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 36/493 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++KI+NS+T+QKE+F PI GKV +YVCG+T YD H+GH R+ + FD++ RYL
Sbjct: 1 MSVKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVT+VRN TD+DDKII+RA + E+P +L+ R+ Q D L+ L P +PR + ++
Sbjct: 61 EVTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVP 120
Query: 137 QIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I +I ++++N AY + GDVFF V + +YG+LS + L+ +AG RV V KR+P
Sbjct: 121 EIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSDSKRDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEP WDSPWG GRPGWHIECSAMS+ L FDIHGGG+DL FPHHENEI
Sbjct: 181 DFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + V WMH G + N EKMSKSLGN +IR+ + LR+FL+S HYR
Sbjct: 241 AQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+PL+YS L++ A+ Y L+ P H KT+ D F+
Sbjct: 301 NPLSYSKENLENGRLALERFYLALRGL-----PVVNHEKTSSYT-----------DRFYE 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT F+ + +N + ++ L L+ + N I
Sbjct: 345 AMDDDFNTPIAFALLFE-----MVREINRFRDNNQIEKAAVLAAELKCLGN-------IF 392
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GLL YS +Q A K A++ E + +LI++R AR KD+ +DQIR LT G
Sbjct: 393 GLL---QYSP--EQFLQGAKKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDLG 445
Query: 496 IALMDMGKETIWR 508
+A+ D T WR
Sbjct: 446 VAIEDSSDGTSWR 458
>gi|113867241|ref|YP_725730.1| cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
gi|123134207|sp|Q0KCA9.1|SYC_CUPNH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113526017|emb|CAJ92362.1| Cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
Length = 462
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/500 (43%), Positives = 286/500 (57%), Gaps = 53/500 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++ ++K+ F PI PGKV MYVCG+T YD H+GHAR V FD+++R+L EV
Sbjct: 4 LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+N TD+DDKIIRRA + GE L+ R+ Q D A L + P ++PR +D++ Q+
Sbjct: 64 TYVQNITDIDDKIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQM 123
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI ++ AY +GDV ++V K YG+LSG+ LE+ RAGERV+ + K++P DF
Sbjct: 124 LDMIGKLEAKGLAYQASDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVSANDAKQDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK+AKA EP WDS WG GRPGWHIECSAMS L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y +R F++ AHY
Sbjct: 244 IAQSEGASGKPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS LD A A+ +Y L+D + P C DE H
Sbjct: 304 RSPLNYSDAHLDDARHALTRLYTALKDSQ----------------PGG--CAVDW-DEPH 344
Query: 375 AR-----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
AR M DD NT ++ F D IN + + +Q +K
Sbjct: 345 ARRFAEAMGDDFNTPIAMSVLF-DLASEINRTGSTAAARQ------------------LK 385
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+ LGLL ++ + D ++ E + LI R A+ ++F+++D+IRA
Sbjct: 386 GLAGTLGLLERDPHTFLQGGRSDDG-----ISPEQIETLIAARKTAKVERNFAEADRIRA 440
Query: 490 DLTRKGIALMDM-GKETIWR 508
L GI L D G T WR
Sbjct: 441 QLLEAGIVLEDKPGGATEWR 460
>gi|336435108|ref|ZP_08614826.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336002001|gb|EGN32128.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 468
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 281/493 (56%), Gaps = 30/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+M++QKE F P+ GKV MYVCG T Y+ H+G+AR + FD + RY E+ +V
Sbjct: 1 MKLYNTMSKQKEEFVPLEEGKVRMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII++AN+ G +S RY E DMAD+ LP T P ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKKANEEGVTAEEISKRYIAECKKDMADMNVLPATTHPLATEEIGGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
++I +I AY G V+F + +YG+LS + L++ R+G R V+ + K +P
Sbjct: 121 IELIGTLIEKGYAYAKNGTVYFRTRQFKDYGKLSHKNLDDLRSGNRALLVSGEDEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEP+W+SPWG GRPGWHIECS MS YL + DIH GG DLIFPHHENEI
Sbjct: 181 DFVLWKPKKEGEPAWESPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLIFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHNG + +N KMSKSLGNFFT+R+I E+Y LR F++SAHYR
Sbjct: 241 AQSEAANGKEFSKYWMHNGFLNIDNRKMSKSLGNFFTVREIGEKYDLQVLRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLN+S +++A + + I + L T E +++ F
Sbjct: 301 SPLNFSAELMEAAKNGLDRIVTATDNLRFLLGKASVDTLTEEEQAQMEKAQGFVKN-FEN 359
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ + F D +K N++ + K Q L LI L +L
Sbjct: 360 AMEDDFNTADAVAAIF-DLVKHANTTASAESSKAYLQGVLDLIVKLSD----------VL 408
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G++ ++ +L + D+ LI ER AARK ++F+++D+IR +L KG
Sbjct: 409 GIITE---------------RKEDLLDADIEALIAERQAARKERNFARADEIRDELLAKG 453
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 454 IILEDTREGVKWK 466
>gi|337751746|ref|YP_004645908.1| protein CysS [Paenibacillus mucilaginosus KNP414]
gi|336302935|gb|AEI46038.1| CysS [Paenibacillus mucilaginosus KNP414]
Length = 465
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/493 (41%), Positives = 285/493 (57%), Gaps = 31/493 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TLKIYN+M++ KE F P+ PGKV MYVCG T YD H+G+AR + FD++ RYLE +
Sbjct: 1 MTLKIYNTMSRTKEEFRPLDPGKVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLESVGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDK+IR+A+D+G +++ + Q+Y D L T PRV+ +M
Sbjct: 61 EVNYVVNFTDVDDKLIRKASDMGMTVPEIADLFVQKYYEDTKGLGVREATLHPRVTQNMT 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + I+ + AY GDV+F P YG+LS Q LE + G RV VD RK NP D
Sbjct: 121 EIIEFISGLEEKGLAYEAGGDVYFRTRSFPEYGKLSHQNLEELQYGIRVDVDERKENPQD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE SW SPWG GRPGWHIECSAM +L DIHGGG DL FPHHE EIA
Sbjct: 181 FVLWKAAKPGEISWSSPWGEGRPGWHIECSAMVRKFLGDTIDIHGGGQDLAFPHHECEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS + +YWMHNG V NNEKMSKSLGN + ++ E +R+F++S HYR+
Sbjct: 241 QSEGMTGHAMANYWMHNGFVNINNEKMSKSLGNGINVNRLLESIPSQVIRYFMLSGHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLN+S ++ A ++ L++C L + + ++++F A+
Sbjct: 301 PLNFSDEAVEQAKGSL----ARLENCIAGLKHRLQSAAEGEAEEEVSAAVQAVKEQFEAK 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS-LIESLRKIENEVKEVLRIL 435
M+DD NT +T F+ +N + ++ + L L+E ++ +L
Sbjct: 357 MNDDFNTPDAITAMFE----LVNFANPYAARESVRTASLQLLLEQFAAMDG-------VL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+L P +D+ L ++++ QLI ER ARK+K+++++D+IR LT +G
Sbjct: 406 GILTP----------EDEG-----LLDDEIEQLIIERTEARKSKNWARADEIRDLLTARG 450
Query: 496 IALMDMGKETIWR 508
I L D + WR
Sbjct: 451 ILLEDTAQGIRWR 463
>gi|297528461|ref|YP_003669736.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|297251713|gb|ADI25159.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
Length = 466
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/496 (42%), Positives = 290/496 (58%), Gaps = 39/496 (7%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++++YN++T++KE F P+ P KV MYVCG T Y+ H+G+ARAAV FD + RYLE +
Sbjct: 3 SIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAVVFDTIRRYLEFRGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYV NFTDVDDK+I+ A +LGE+ +++ R+ + Y D+ L C PRV+++++
Sbjct: 63 VTYVSNFTDVDDKLIKAARELGESVPAIAERFIEAYFEDIQALGCKKADIHPRVTENIDA 122
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I + I +I+ AY V+GDV++ K YG+LS Q ++ +AG R+ + +K +P DF
Sbjct: 123 IIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIGEKKDDPLDF 182
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQ
Sbjct: 183 ALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQ 242
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A YW+HNG++ NNEKMSKSLGNF + I P LR F++S HYR P
Sbjct: 243 SEALTGKPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDIIREIDPQVLRFFMLSVHYRHP 302
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDE 372
+NYS L+SA + L+ + A S Q H A N D I +R
Sbjct: 303 INYSEELLESAR-------RGLERLKTAYSNLQ-HRLQASTNLTDNDEEWVSRIADIRAS 354
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT++ + F+ A K N L Q K +I + + E +++
Sbjct: 355 FIREMDDDFNTANGIAVLFELA-KQANLYL------QEKTTSEKVIHAFLR---EFEQLA 404
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGL LK+ EL +E++ LI++R ARKN+DF+ +D+IR +L
Sbjct: 405 DVLGL----------------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRDELR 448
Query: 493 RKGIALMDMGKETIWR 508
K I L D + T W+
Sbjct: 449 AKNIILEDTPQGTRWK 464
>gi|451965977|ref|ZP_21919232.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
gi|451315226|dbj|GAC64594.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
Length = 461
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 279/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R V FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYTL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ L+ R E D L P +PR + H+ +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENKESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IALVEQLIARGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G A PAA++ F A M
Sbjct: 302 LNYSEENLKQARAALERLYTALR------------GTDATAQPAADEAFEG---RFRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + +++ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKGED--------MAQANALAAQLRRLAGVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + D + E LI++R AR KD++++D R L G
Sbjct: 394 LEQDPDAFLQSGASADDGEAAQIE-------ALIKQRNDARAAKDWARADDARDQLNALG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|283834167|ref|ZP_06353908.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
gi|291070317|gb|EFE08426.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
Length = 461
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + +++P AR F M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEAR---------------FIEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + LRK+ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKGEDMAAAN-GMASHLRKLSS-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R L G
Sbjct: 394 LEQEPEAFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|354596705|ref|ZP_09014722.1| cysteinyl-tRNA synthetase [Brenneria sp. EniD312]
gi|353674640|gb|EHD20673.1| cysteinyl-tRNA synthetase [Brenneria sp. EniD312]
Length = 461
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L+ R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNVTDIDDKIIKRAAENGETCDQLTTRMIAEMHADFDALNILRPDEEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I AYV GDV F+V + YG LS Q L+ +AG RV + K NP DF
Sbjct: 122 IELVKALIARRHAYVASNGDVMFSVATARGYGALSRQDLDQLQAGARVEITEVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKKSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +A V+YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS
Sbjct: 242 STSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++ + I A F M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDSSVE-----AQGGEIFEA----------RFREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + P + L +LRK+ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----RDINRLKTEDPHEAN-QLASALRKLA-------KVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D ++ E LI++R AR+ KD++ +DQ R L G
Sbjct: 394 LEQDPEVFLQSGAQTDDAEVREIE-------GLIKQRKDARQAKDWALADQARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IILEDGPQGTIWR 459
>gi|431927424|ref|YP_007240458.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
gi|431825711|gb|AGA86828.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
Length = 462
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/497 (42%), Positives = 281/497 (56%), Gaps = 44/497 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++T+ KE F P+ V MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 2 MALSIYNTLTKTKEAFRPLQGNNVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGY 61
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA + GE +L R D L L P +PR +DH+
Sbjct: 62 DVTYVRNITDIDDKIIRRAGENGEPFQALVERMIAAMHEDETRLDVLRPDIEPRATDHIA 121
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K++P
Sbjct: 122 GMHQMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQDPL 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSW SPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKGAKPGEPSWSSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 242 AQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ + PA D + F
Sbjct: 302 SPINYSEDSLREAKSALERFYNGLKGL-------------PNVAPAGGD---EFVARFAT 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N+ F D ++ +N L++ P + ++ +KE+ +L
Sbjct: 346 AMDDDFNSPEACAVLF-DMIR----EVNRLRESDPT--------AAAQLAARLKELASVL 392
Query: 436 GLLPPGAYSEVLQQLKDKALKRA----ELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
G+L QL+ +A +A ++ +V LI R AR K++++SD+IR L
Sbjct: 393 GVL----------QLEPEAFLQAGAAGKVDAAEVEALIAARLTARAEKNWAESDRIRDQL 442
Query: 492 TRKGIALMDMGKETIWR 508
T G+ L D T WR
Sbjct: 443 TAMGVVLEDGKGGTTWR 459
>gi|410088151|ref|ZP_11284848.1| Cysteinyl-tRNA synthetase [Morganella morganii SC01]
gi|409765456|gb|EKN49568.1| Cysteinyl-tRNA synthetase [Morganella morganii SC01]
Length = 462
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 287/491 (58%), Gaps = 33/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI PGK+GMYVCG+T YDL H+GH R V+FD + RYL H +V
Sbjct: 2 LKIYNTLSRQKEEFKPINPGKIGMYVCGITVYDLCHIGHGRTFVAFDTIVRYLRHAGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TDVDDKII+RAN+ E L +R E D + + P +PR + H+++I
Sbjct: 62 NYIRNITDVDDKIIKRANENNETCDQLVDRMVAEMHRDFDAMNLMRPDSEPRATHHIKEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +++ AYV + GDV F + P YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITQLLLDRGHAYVADNGDVMFDISSDPEYGLLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGTHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y P +R+FL+SAHYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLGYYDPETVRYFLLSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A A+ Y L+ + K A + E+ N+ RD M
Sbjct: 302 LNYTEENLKQARTALERFYTALRGTD----------KDAAV-VVNEEFANRFRDA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A LN LK++ + + + +++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----RELNRLKQED--------MTAANGLAAQLRQLAGVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + Q L+ A ++ + LI++R AR +K+++ +D R LT GI
Sbjct: 394 LT----QDPEQFLQSGAQSESDEDAAKIEALIKQRNDARASKEWALADAARDALTDMGIV 449
Query: 498 LMDMGKETIWR 508
L D + T WR
Sbjct: 450 LEDGPQGTTWR 460
>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|229558710|sp|B4U9I4.1|SYC_HYDS0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 488
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/491 (39%), Positives = 290/491 (59%), Gaps = 12/491 (2%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN+++ + E F PI P +V +Y CGVT YD SH+GH R+ + FD+ RYLE L V +
Sbjct: 5 LYNTLSAELEEFVPINPPQVNIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEKLGYRVKF 64
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRNFTD+DDKII +AN+ ++ +S++NRY Y +DM + P +PRV++HME+I
Sbjct: 65 VRNFTDIDDKIINKANEENKDFMSIANRYIARYYLDMEAINVKPANVEPRVTEHMEEIIS 124
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
+I+++I AY +GD++F+++ +YG+LS + E AG R+ +KRNP DFALW
Sbjct: 125 LISKLIELGKAYESDGDIYFSIDSFKDYGKLSKRSPEELEAGARIEPSLKKRNPLDFALW 184
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KA+K+ EP W+SPW GRPGWH EC AM +L DIH GGIDL+FPHHENEIAQ+ +
Sbjct: 185 KASKSHEPGWESPWSYGRPGWHTECVAMIFKHLGETIDIHAGGIDLVFPHHENEIAQAES 244
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
YWMHNG VT +KMSKSLGNF T+++I +YHP LR ++ HYRSPL++
Sbjct: 245 ITGKPFARYWMHNGLVTVGGKKMSKSLGNFVTLKEIYTKYHPDVLRLLVLFTHYRSPLDF 304
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDD 380
S +++ A + ++D E L + GK ++ +++F+ +S+D
Sbjct: 305 SFEKMEETKKAYERLKSAIEDIE-PLKAIAKEGKPV-VDIDFYSLEKSTQEQFYKALSED 362
Query: 381 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLR-ILGL 437
NTS + F + LN K + K ++ +E + N +K+ L+ I GL
Sbjct: 363 FNTSLAIAHIFNAV-----AELNKAKTESFKIGYITPKELEGYLFLANSLKQTLKDIFGL 417
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L L+ L+ + ++ E + LI+ R A++NKDF +D IR +L GI
Sbjct: 418 LEENTLQNTLKTLEPAS--SVNISTEFLEILIKARNLAKENKDFKVADFIRDELLNYGIK 475
Query: 498 LMDMGKETIWR 508
L D TIW+
Sbjct: 476 LEDTKAGTIWK 486
>gi|381208309|ref|ZP_09915380.1| cysteinyl-tRNA synthetase [Lentibacillus sp. Grbi]
Length = 470
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/493 (40%), Positives = 287/493 (58%), Gaps = 30/493 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + IYN++T KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + RYLE+ +
Sbjct: 1 MAITIYNTLTHDKEAFKPLDAGKVRMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYKEY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV NFTDVDDKII AN+L E ++NR+ + YL D+ L TY PRV++ M+
Sbjct: 61 EVDYVLNFTDVDDKIINAANELNEQVPDVANRFIEAYLSDVEALGVKKATYNPRVTETMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I+ +I+ AY V+GDV+F +YG+LS Q ++ R+G R+ V +K +P D
Sbjct: 121 DIIRFISNLISKGYAYEVDGDVYFKPRSFDDYGKLSHQSIDELRSGARIQVGEKKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK AK E +WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKKAKDDEIAWDSPWGQGRPGWHIECSAMAKKYLGETIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + +YWMHNG++ +NEKMSKSLGNF + I ++ P +R F++S HYR+
Sbjct: 241 QSEAMTEKPFANYWMHNGYINIDNEKMSKSLGNFVLTKDIISQHDPQVIRFFMLSVHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+N++ L A +++ I + E Q + A + I++L ++F A
Sbjct: 301 PINFTEELLQGAKNSLDRIKNAWTNLE---HRSQSSMDLTDKSNAWLEKISQLHNQFEAA 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNM-LKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT++ ++ F+ + N+ L++KQ +R + + VL +L
Sbjct: 358 MDDDFNTANAISVLFE-----LTKEANVYLEEKQTDTH------VIRAFQESMNTVLDVL 406
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G+ + L +ED+ L++ R ARKN+DF ++D+IR L K
Sbjct: 407 GI---------------RMETEEPLLDEDIEALLKARTEARKNRDFGRADEIRDALKGKN 451
Query: 496 IALMDMGKETIWR 508
I L D + T W+
Sbjct: 452 IILEDTPQGTRWK 464
>gi|256823180|ref|YP_003147143.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
gi|256796719|gb|ACV27375.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
Length = 465
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/494 (42%), Positives = 285/494 (57%), Gaps = 36/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++T+QKE F P+ GKV MYVCGVT YDL H+GHAR +FD++ R+L+ +V
Sbjct: 2 LQIYNNLTRQKEPFKPMEEGKVSMYVCGVTTYDLCHIGHARTYAAFDVINRFLKFSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE+ L+ R+ QE D + P +PR + M++I
Sbjct: 62 TYVRNITDIDDKIINRANENGEDFSELTERFIQEMYQDFDAIGLQRPDIEPRATQTMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M +I AY + GDV+F V +YG+LS Q L AGERV V+ K++P DF
Sbjct: 122 IQMTQTLIEKGAAYATDNGDVYFHVPAFKDYGKLSKQDLTQLNAGERVDVNDIKKDPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK++K GEPSWDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 ALWKSSKPGEPSWDSPWGKGRPGWHIECSAMSKKCLGDTFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + W+H G V + EKMSKSLGNFFTIR + ++Y P ++R+FL+S HYRS
Sbjct: 242 SECANDCTFARVWIHTGMVQVDKEKMSKSLGNFFTIRDVLKQYRPESVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFH 374
L+Y+ L+SA ++ +Y +L+ + N A +D + L F
Sbjct: 302 LSYTQANLESADASLERLYTSLRGVD--------------FNRATDDKLGILEQAQLRFT 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD N + F + +N LK + + I ++KE+ +
Sbjct: 348 EAMDDDFNVPEAMPVLFD-----LAKEVNRLKATD--------MATAATIAVKIKELAGV 394
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
L LL S + D +++++ED+ LI++R AR +K++ +D+IR L
Sbjct: 395 LSLLQQDPESFLKSGAGD-----SDVSDEDIDSLIQQRLQARADKNWDLADEIRDKLHAM 449
Query: 495 GIALMDMGKETIWR 508
I L D T WR
Sbjct: 450 NIELEDAAGGTSWR 463
>gi|56418620|ref|YP_145938.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261417586|ref|YP_003251268.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|319765244|ref|YP_004130745.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|61216117|sp|Q5L429.1|SYC_GEOKA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56378462|dbj|BAD74370.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261374043|gb|ACX76786.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|317110110|gb|ADU92602.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
Length = 466
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/496 (42%), Positives = 290/496 (58%), Gaps = 39/496 (7%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++++YN++T++KE F P+ P KV MYVCG T Y+ H+G+ARAA+ FD + RYLE +
Sbjct: 3 SIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYV NFTDVDDK+I+ A +LGE+ +++ R+ + Y D+ L C PRV+++++
Sbjct: 63 VTYVSNFTDVDDKLIKAARELGESVPAIAERFIEAYFEDIQALGCKKADIHPRVTENIDT 122
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I + I +I+ AY V+GDV++ K YG+LS Q ++ +AG R+ + +K +P DF
Sbjct: 123 IIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIGEKKDDPLDF 182
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQ
Sbjct: 183 ALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQ 242
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A YW+HNG++ NNEKMSKSLGNF + I P LR F++S HYR P
Sbjct: 243 SEALTGKPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDIIREIDPQVLRFFMLSVHYRHP 302
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDE 372
+NYS L+SA + L+ + A S Q H A N D I +R
Sbjct: 303 INYSEELLESAR-------RGLERLKTAYSNLQ-HRLQASTNLTDNDEEWVSRIADIRAS 354
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT++ + F+ A K N L Q K +I + + E +++
Sbjct: 355 FIREMDDDFNTANGIAVLFELA-KQANLYL------QEKTTSEKVIHAFLR---EFEQLA 404
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGL LK+ EL +E++ LI++R ARKN+DF+ +D+IR +L
Sbjct: 405 DVLGL----------------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRDELR 448
Query: 493 RKGIALMDMGKETIWR 508
K I L D + T W+
Sbjct: 449 AKNIILEDTPQGTRWK 464
>gi|332532274|ref|ZP_08408155.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
gi|332038372|gb|EGI74817.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
Length = 459
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/494 (42%), Positives = 281/494 (56%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ ++
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IAMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECS MS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSVMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ + Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-INKLRDEFHAR 376
LNYS LD A ++ IY L+D + P D N+ +F
Sbjct: 302 LNYSQENLDQARSSLERIYTALRD----------------VVPVECDLEGNEFVAKFRKA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT L F+ + LN +K+ Q ++ +LR LG
Sbjct: 346 MNDDFNTPEALPVLFE-----LAKELNRVKESDAGQA------------GKLAFILRSLG 388
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+ V QQ + L+ + +E + LI +R AR +KD++ +D+ R L
Sbjct: 389 EVLG-----VAQQAPEAFLQGGQDDDEVATIEALIVKRNEARASKDWAAADEARDALNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 444 GVILEDSAGKTTWR 457
>gi|392546145|ref|ZP_10293282.1| cysteinyl-tRNA ligase [Pseudoalteromonas rubra ATCC 29570]
Length = 459
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/497 (44%), Positives = 287/497 (57%), Gaps = 48/497 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IY+++T+QK F PIV GKVGMYVCG+T YD H+GHAR VSFD++ RYL HL EV
Sbjct: 2 LQIYDTLTRQKTEFKPIVEGKVGMYVCGITIYDFCHVGHARTYVSFDVMNRYLRHLGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E +L+ R + D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNEEINALTVRMTKAMHEDFEALNILPADIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+MI ++I AYV GDV F V +YG+LS Q L+ +AG RV V K +P DF
Sbjct: 122 IEMIERLIEKGHAYVASNGDVLFDVSTFEDYGKLSQQDLDMLQAGARVEVAEGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWTSPWGEGRPGWHIECSAMSSKHLGELFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSLGNFFT+R++ + Y +R+FLI+ HYRS
Sbjct: 242 SCCANNGCYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAYDRETVRYFLINGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A ++ IY L+ E+ + + AR F A M
Sbjct: 302 LNYSQENLEQARSSLERIYTALRGVELVETELAGNPFVAR---------------FEAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK---QQQLSLIESLRKIENEVKEVLRI 434
+DD NT L F+ A +N+LK K + L+ ++ EVL I
Sbjct: 347 NDDFNTPEALPVIFELA-----KEVNLLKDSDAKAAGEHAFILV--------KLAEVLGI 393
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADL 491
Q +A + E++V + LIE+R AR +KD++ +D R L
Sbjct: 394 -------------AQQDPEAFLHGDQDEDEVAKIEALIEQRKNARADKDWAAADAARDAL 440
Query: 492 TRKGIALMDMGKETIWR 508
T G+ L D +T WR
Sbjct: 441 TAMGVVLEDSAGKTTWR 457
>gi|416074249|ref|ZP_11584479.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444337722|ref|ZP_21151657.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348006937|gb|EGY47302.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443546405|gb|ELT56069.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 469
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 292/494 (59%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK++N++T++KE+F PI GK+GMYVCGVT YDL H+GH R V FD++ RYL +L ++
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R E D L L P ++PR + H+ +I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D++ ++I AYV + GDV F VE +YG+LS Q LE +AG R+ ++ K+N DF
Sbjct: 132 IDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNTMDF 191
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 192 VLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQ 251
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS
Sbjct: 252 SCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQ 311
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + D F M
Sbjct: 312 LNYSEENLNLAHGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAM 356
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A LN LK + + + ++E+ ILGL
Sbjct: 357 DDDFNTPNALSVLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGL 403
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L QL + +A E++V + LI++R +R KD++ +D R LT
Sbjct: 404 L----------QLDPEQFLQAGSDEDEVAKIEALIKQRNESRATKDWAAADAARNALTEM 453
Query: 495 GIALMDMGKETIWR 508
GI L D T WR
Sbjct: 454 GIILEDGPNGTTWR 467
>gi|56478148|ref|YP_159737.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
gi|61216130|sp|Q5P1H8.1|SYC_AROAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56314191|emb|CAI08836.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
Length = 461
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 291/494 (58%), Gaps = 40/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L I+N++T++KE F PI PGKV MYVCG+T YD HLGHAR V FD++ R+L E+
Sbjct: 2 LHIHNTLTRRKEAFVPIAPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFEL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKIIRRA + GE+ +L++R+ D L L P ++PR ++++ Q+
Sbjct: 62 TYVRNITDIDDKIIRRAGEKGESIRTLTDRFIAAMHEDADALGVLRPDHEPRATEYVMQM 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ +I ++ + AYV DV ++V K +YGR SG+ L+ RAGERV V K++P DF
Sbjct: 122 QSLIGRLRDKGLAYVAGNRDVCYSVRKFDSYGRFSGKSLDELRAGERVEVAGDKQDPLDF 181
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWK A+ EP W SPWG GRPGWHIECSAMS+ L +FDIHGGG DL FPHHENE
Sbjct: 182 VLWKHARTDEPDEVKWASPWGAGRPGWHIECSAMSSDLLGEQFDIHGGGQDLQFPHHENE 241
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR + ER+ P +R F++ AHY
Sbjct: 242 IAQSEGAHGHTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLERFDPEVVRFFILRAHY 301
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
RSPLNYS L+ A A+ +Y L++ + + A+++ D + +R F
Sbjct: 302 RSPLNYSDAHLEDARQALTRLYTALRNVQPS---------DAQVD---WDEPHAMR--FR 347
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M DD NT+ + F+ A + N S + Q K L R+
Sbjct: 348 AAMDDDFNTAEAVAVLFELANE-ANRSGSAATAAQLKGLGGVLGLLARE----------- 395
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
P + DK A + +IE RA A+K+KD++++D+IRA L
Sbjct: 396 ----PASFLQGRMAGEPDKGEGVA------IESMIERRALAKKSKDYAEADRIRAQLLAS 445
Query: 495 GIALMDMGKETIWR 508
GI L D T+WR
Sbjct: 446 GIVLEDTPHGTVWR 459
>gi|22125011|ref|NP_668434.1| cysteinyl-tRNA synthetase [Yersinia pestis KIM10+]
gi|45440695|ref|NP_992234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
gi|21957858|gb|AAM84685.1|AE013714_1 cysteine tRNA synthetase [Yersinia pestis KIM10+]
gi|45435553|gb|AAS61111.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
Length = 476
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/499 (42%), Positives = 282/499 (56%), Gaps = 38/499 (7%)
Query: 13 PKMDLTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLE 72
P+ LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL
Sbjct: 11 PRNVPMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLR 70
Query: 73 HLKCEVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVS 132
+L +TYVRN TDVDDKII+RA + E L+ R E D L P +PR +
Sbjct: 71 YLGYSLTYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRAT 130
Query: 133 DHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRK 191
H+ +I +M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V K
Sbjct: 131 HHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVK 190
Query: 192 RNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHH 251
RNP DF LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHH
Sbjct: 191 RNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHH 250
Query: 252 ENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLIS 311
ENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S
Sbjct: 251 ENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMS 310
Query: 312 AHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD 371
HYRS LNYS L A ++ +Y L+ G A PA +
Sbjct: 311 GHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEA 355
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT + F I +N LK + + + + E++++
Sbjct: 356 RFRTAMDDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKL 402
Query: 432 LRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
++LGLL P + + Q D + + E LI++R AR +K+++ +D R
Sbjct: 403 AQVLGLLEQDPELFLQGGAQADDDEVAKIE-------ALIKQRNDARSSKNWALADAARD 455
Query: 490 DLTRKGIALMDMGKETIWR 508
L GI L D + T WR
Sbjct: 456 QLNELGIVLEDGPQGTTWR 474
>gi|108808560|ref|YP_652476.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|108811182|ref|YP_646949.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|145599972|ref|YP_001164048.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149365066|ref|ZP_01887101.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|153947472|ref|YP_001401974.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162421370|ref|YP_001605813.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011255|ref|ZP_02232153.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214354|ref|ZP_02240389.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398585|ref|ZP_02304109.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422736|ref|ZP_02314489.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423331|ref|ZP_02315084.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218930118|ref|YP_002347993.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|229838673|ref|ZP_04458832.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896170|ref|ZP_04511340.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|229899240|ref|ZP_04514383.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901410|ref|ZP_04516532.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|270489600|ref|ZP_06206674.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294504817|ref|YP_003568879.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|384123284|ref|YP_005505904.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|384127139|ref|YP_005509753.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|384139080|ref|YP_005521782.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|420548145|ref|ZP_15045976.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|420553460|ref|ZP_15050726.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|420559037|ref|ZP_15055595.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|420564461|ref|ZP_15060440.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|420569501|ref|ZP_15065018.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|420575167|ref|ZP_15070142.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|420580485|ref|ZP_15074976.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|420585834|ref|ZP_15079824.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|420590946|ref|ZP_15084421.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|420596334|ref|ZP_15089269.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|420601996|ref|ZP_15094308.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|420607428|ref|ZP_15099212.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|420612817|ref|ZP_15104048.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|420618197|ref|ZP_15108746.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|420623493|ref|ZP_15113510.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|420628572|ref|ZP_15118118.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|420633693|ref|ZP_15122712.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|420638899|ref|ZP_15127398.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|420644384|ref|ZP_15132392.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|420649655|ref|ZP_15137163.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|420655294|ref|ZP_15142232.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|420660785|ref|ZP_15147156.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|420666090|ref|ZP_15151921.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|420670966|ref|ZP_15156357.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|420676308|ref|ZP_15161217.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|420681923|ref|ZP_15166294.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|420687244|ref|ZP_15171028.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|420692464|ref|ZP_15175609.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|420698237|ref|ZP_15180687.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|420704036|ref|ZP_15185317.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|420709438|ref|ZP_15190082.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|420714890|ref|ZP_15194936.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|420720394|ref|ZP_15199666.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|420725871|ref|ZP_15204476.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|420731467|ref|ZP_15209496.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|420736490|ref|ZP_15214034.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|420741963|ref|ZP_15218954.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|420747666|ref|ZP_15223787.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|420753121|ref|ZP_15228643.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|420758860|ref|ZP_15233290.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|420764162|ref|ZP_15237915.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|420769390|ref|ZP_15242606.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|420774374|ref|ZP_15247118.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|420779986|ref|ZP_15252059.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|420785573|ref|ZP_15256951.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|420790732|ref|ZP_15261580.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|420796262|ref|ZP_15266544.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|420801311|ref|ZP_15271084.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|420806674|ref|ZP_15275938.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|420812024|ref|ZP_15280749.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|420817545|ref|ZP_15285730.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|420822854|ref|ZP_15290497.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|420827943|ref|ZP_15295069.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|420833622|ref|ZP_15300202.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|420838498|ref|ZP_15304604.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|420843684|ref|ZP_15309311.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|420849347|ref|ZP_15314399.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|420854999|ref|ZP_15319197.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|420860203|ref|ZP_15323771.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|421764579|ref|ZP_16201368.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
gi|21264007|sp|Q8ZCC0.1|SYC_YERPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123073499|sp|Q1CKY1.1|SYC_YERPN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123372235|sp|Q1C4U1.1|SYC_YERPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470969|sp|A7FL46.1|SYC_YERP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470970|sp|A4TP63.1|SYC_YERPP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558804|sp|A9R253.1|SYC_YERPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|108774830|gb|ABG17349.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|108780473|gb|ABG14531.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|115348729|emb|CAL21675.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|145211668|gb|ABP41075.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149291479|gb|EDM41553.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|152958967|gb|ABS46428.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162354185|gb|ABX88133.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989933|gb|EDR42234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204483|gb|EDR48963.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958327|gb|EDR55348.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051089|gb|EDR62497.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057501|gb|EDR67247.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681339|gb|EEO77433.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|229687642|gb|EEO79715.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695039|gb|EEO85086.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701093|gb|EEO89122.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|262362880|gb|ACY59601.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|262366803|gb|ACY63360.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|270338104|gb|EFA48881.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294355276|gb|ADE65617.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|342854209|gb|AEL72762.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|391423674|gb|EIQ86138.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|391424374|gb|EIQ86753.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|391424729|gb|EIQ87076.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|391438705|gb|EIQ99426.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|391439857|gb|EIR00474.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|391443572|gb|EIR03875.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|391455549|gb|EIR14656.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|391456444|gb|EIR15468.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|391458487|gb|EIR17345.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|391471519|gb|EIR29074.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|391472873|gb|EIR30293.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|391473719|gb|EIR31069.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|391487453|gb|EIR43379.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|391489029|gb|EIR44814.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|391489638|gb|EIR45367.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|391503544|gb|EIR57731.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|391503810|gb|EIR57967.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|391508889|gb|EIR62571.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|391519328|gb|EIR71970.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|391521221|gb|EIR73707.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|391522153|gb|EIR74563.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|391534333|gb|EIR85521.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|391537088|gb|EIR88010.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|391539374|gb|EIR90102.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|391552393|gb|EIS01819.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|391552769|gb|EIS02164.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|391553371|gb|EIS02701.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|391567328|gb|EIS15201.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|391568468|gb|EIS16184.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|391573381|gb|EIS20451.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|391581635|gb|EIS27496.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|391584036|gb|EIS29622.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|391594270|gb|EIS38438.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|391597353|gb|EIS41185.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|391598656|gb|EIS42350.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|391611769|gb|EIS53912.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|391612314|gb|EIS54398.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|391615548|gb|EIS57299.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|391624825|gb|EIS65408.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|391630058|gb|EIS69884.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|391635620|gb|EIS74755.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|391637683|gb|EIS76572.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|391647632|gb|EIS85241.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|391651309|gb|EIS88497.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|391656004|gb|EIS92682.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|391660617|gb|EIS96746.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|391668146|gb|EIT03408.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|391677645|gb|EIT11934.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|391678488|gb|EIT12696.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|391679224|gb|EIT13376.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|391691554|gb|EIT24472.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|391694557|gb|EIT27202.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|391696240|gb|EIT28745.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|391708199|gb|EIT39474.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|391711820|gb|EIT42751.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|391712687|gb|EIT43541.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|391724443|gb|EIT54019.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|391725375|gb|EIT54847.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|391727841|gb|EIT57009.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|411174690|gb|EKS44721.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
Length = 461
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKLAQVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR +K+++ +D R L G
Sbjct: 394 LEQDPELFLQGGAQADDDEVAKIE-------ALIKQRNDARSSKNWALADAARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|157146856|ref|YP_001454175.1| cysteinyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|157084061|gb|ABV13739.1| hypothetical protein CKO_02631 [Citrobacter koseri ATCC BAA-895]
Length = 461
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 283/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYTL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q LE +AG RV V K NP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLEQLQAGARVDVVDVKHNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++P AR A M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-AMASHLRKISG-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D L E LI++R ARK KD++ +D R L G
Sbjct: 394 LEQEPEAFLQSGAQADDGELAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|385856089|ref|YP_005902602.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 473
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/507 (42%), Positives = 283/507 (55%), Gaps = 58/507 (11%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
IYN++T+QKE F PI P V MYVCG+T YD HLGHAR V FD++ R+L +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RA + GE L+ R+ Q D L L P +P+ ++++ Q+
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFAL 199
MI +I N AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF L
Sbjct: 124 MIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVL 183
Query: 200 WKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSC 259
WKAAKAGEP+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS
Sbjct: 184 WKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSV 243
Query: 260 AACQD----------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 303
A S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y
Sbjct: 244 GASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDLE 303
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
+R F++ AHYRSPLNYS LD A A+ +Y TL++ A E+
Sbjct: 304 VVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA---------- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
N F+A M+DD T + F+ L + K L L+
Sbjct: 354 ---NGYTRRFYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKA 398
Query: 424 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 481
+ I+GLL P A+ L+ A L+ E++ LI R AR +K++
Sbjct: 399 LGG-------IIGLLQRDPTAF------LQGSAASDG-LSNEEIEDLIARRKQARADKNW 444
Query: 482 SKSDQIRADLTRKGIALMDMGKETIWR 508
++SD+IR L I L D T WR
Sbjct: 445 AESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|119471530|ref|ZP_01613944.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|119445473|gb|EAW26759.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
Length = 459
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 283/494 (57%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL H+ +
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ E+ L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R + + Y P ++R+FLIS HYRS
Sbjct: 242 SCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+D + P + E N+ +F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRD----VKPIE-----------CELESNEFVIKFRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILG 436
DD NT L F+ + LN +K+ Q QL+ I ++ + +LG
Sbjct: 347 DDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAFI---------LRTIGEVLG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
V QQ + L+ + E + LI +R AR +K+++ +D+ R L
Sbjct: 393 ---------VAQQAPEAFLQGGQDDNEVATIEALIVKRNDARASKNWAAADEARDALNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 444 GVILEDSAGKTTWR 457
>gi|398791993|ref|ZP_10552691.1| cysteinyl-tRNA synthetase [Pantoea sp. YR343]
gi|398214125|gb|EJN00708.1| cysteinyl-tRNA synthetase [Pantoea sp. YR343]
Length = 461
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/495 (42%), Positives = 292/495 (58%), Gaps = 42/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++QKE F PI G++GMYVCG+T YDL H+GH R V+FD++ RYL ++ ++
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGQIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYMGYQL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN GE+ +L+NR E D A L LPP +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANQNGESIETLTNRMIAEMHKDFAALGILPPDLEPRATRHIDEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ +I + AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELVGTLIERNHAYVADNGDVMFDVLSDKDYGALSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KA EP+W+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENE+AQ
Sbjct: 182 VLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY L+ A A+ +Y L+ + + AR F M
Sbjct: 302 LNYGEDNLNQARAALERLYTALRHTDANATAAGGEEFEAR---------------FRLAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N L K + K +L LR+I N +LG
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRL-KTEDKTSADALAAKLRQIAN-------VLG- 392
Query: 438 LPPGAYSEVLQQLKDKALKR-AELTEEDVLQL---IEERAAARKNKDFSKSDQIRADLTR 493
+LQQ ++ L+ A++ +++V ++ ++ R+ AR KD++++D R L
Sbjct: 393 --------ILQQDPEQFLQSGAQVNDDEVAEIEHWVKARSDARAAKDWAQADVARDKLNE 444
Query: 494 KGIALMDMGKETIWR 508
G+ + D + + WR
Sbjct: 445 LGVIVEDGPQGSSWR 459
>gi|188997490|ref|YP_001931741.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229558793|sp|B2V6B4.1|SYC_SULSY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188932557|gb|ACD67187.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 487
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/497 (41%), Positives = 295/497 (59%), Gaps = 17/497 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN++T +KE F PI PG+V +Y CGVT YD +H+GH R+ + FD++ RYL +L
Sbjct: 1 MSLKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +VRNFTDVDDKII RA + +S+++ +EY D + P +PRV+ H+
Sbjct: 61 NVIFVRNFTDVDDKIINRAKNECLPFSVISDKFIKEYFDDAEKFRIEPADIEPRVTTHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++++ AY +GDV+F+V K YG+LS + ++ AG R+ +K++P D
Sbjct: 121 DIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPGEKKKDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AKAGEP W+SPWG GRPGWH EC AM +L DIHGGG+DL FPHHENEIA
Sbjct: 181 FALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YW+HNG VT N +KMSKSLGN+ +++I +Y P LR ++S HYRS
Sbjct: 241 QAEALTGKPFARYWIHNGLVTVNGQKMSKSLGNYIKLKEIYSKYEPDILRLLVLSVHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRDEFHA 375
PL++S +++ A + +++ EV P E+ + N I K + F++
Sbjct: 301 PLDFSWDKMEETKKAYERLKNAIEEAEVLNKLPIDENFEGDLYN-----AIQKAQSGFYS 355
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLR 433
MSDD NT L F + +N+L+ K K +S IES ++ + ++ R
Sbjct: 356 AMSDDFNTPEALASLFG-----LVREMNILRDKAIKHGGISKKAIESYKEAAKTLHDIGR 410
Query: 434 -ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADL 491
I GL + ++Q + K ++ E ED++Q LIE R ARK K F+ +D IR L
Sbjct: 411 DIFGLF--DSLQPCIKQEEVKVKEKEESINEDLIQVLIEAREKARKEKQFTIADLIRDKL 468
Query: 492 TRKGIALMDMGKETIWR 508
KGI L D T W+
Sbjct: 469 AEKGIILEDAPFGTKWK 485
>gi|386388850|ref|ZP_10073696.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
gi|385696993|gb|EIG27453.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
Length = 459
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 286/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL + +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 CYVRNITDVDDKIIKRAIENNETCDQLVDRMIAEMHKDFDALNILRPDVEPRATHHISEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE P YG LS Q L+ +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIANGHAYVAADGDVMFDVESFPKYGALSRQNLDQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YW+H G +T + EKMSKSLGNFF+IR + + Y +LR+F ++AHYRS
Sbjct: 242 SCCANHGNYVNYWLHTGMLTIDKEKMSKSLGNFFSIRYMLDLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS+ L+ A A+ +Y L+ C++ + PA + + F M
Sbjct: 302 LDYSIDNLNLARSALERLYTALRGCDLTV-------------PAKGG--EQYVEAFKTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ I +N LK + E+ + +KE+ +LGL
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDA--------ETANGLAVCLKELAGVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L+Q + LK +E ++ LI++R A+ K+++ +D++R L
Sbjct: 394 ---------LEQDPETFLKGDANDDEAAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMN 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDTPNGTTWR 457
>gi|237730496|ref|ZP_04560977.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|365105048|ref|ZP_09334440.1| cysteinyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|395231060|ref|ZP_10409357.1| cysteinyl-tRNA synthetase [Citrobacter sp. A1]
gi|424731036|ref|ZP_18159624.1| cysteinyl-trna synthetase [Citrobacter sp. L17]
gi|226906035|gb|EEH91953.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|363643989|gb|EHL83293.1| cysteinyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|394715181|gb|EJF21015.1| cysteinyl-tRNA synthetase [Citrobacter sp. A1]
gi|422894446|gb|EKU34258.1| cysteinyl-trna synthetase [Citrobacter sp. L17]
gi|455641712|gb|EMF20883.1| cysteinyl-tRNA synthetase [Citrobacter freundii GTC 09479]
Length = 461
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + +++P AR F M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEAR---------------FIEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + LRK+ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKGEDMAAAN-GMAAHLRKLSS-------VLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R L G
Sbjct: 394 LEQDPEAFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|404483021|ref|ZP_11018246.1| cysteine-tRNA ligase [Clostridiales bacterium OBRC5-5]
gi|404344111|gb|EJZ70470.1| cysteine-tRNA ligase [Clostridiales bacterium OBRC5-5]
Length = 492
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 296/497 (59%), Gaps = 37/497 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+++++KE F PI GKV MYVCG T Y+L H+G+AR + FD + RY E+ V
Sbjct: 24 MKIFNTLSKRKEEFVPIEEGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYGV 83
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII +A + G + +S RY E DM + LP T P ++ + +
Sbjct: 84 NYVSNFTDVDDKIINKAIEEGVDASVISTRYINECKKDMEAMNVLPATKNPLATEEIGGM 143
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
++MI+ +I N AYV +G V+F V+ YG+LS + ++ ++G R V + K +
Sbjct: 144 EEMISTLIENGHAYVAKDGTVYFRVKSFDGYGKLSHKNIDELQSGFREIKVTGEDGKEDS 203
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK K GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENE
Sbjct: 204 NDFVLWKPKKDGEPYWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDLIFPHHENE 263
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS +A S +YWMHN + +N+KMSKSLGNFFT+R I+E+Y LR F++SAHY
Sbjct: 264 IAQSESASGKSFANYWMHNAFLNIDNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHY 323
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRD 371
RSPLN+S ++++ +++ I +++ L Q+ ++ I A + L+D
Sbjct: 324 RSPLNFSAELMEASKNSLERILTGVEN----LKDVQKKNNSSPITDAELSNLEMAKVLKD 379
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
+F A M DD NT+ ++ F+ +K N+SLN + S +E + N ++ +
Sbjct: 380 KFVAAMDDDFNTADAISAIFE-LIKLSNTSLN----------ENSTLEYANGLLNIIEPL 428
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LG++ ++ E+ + ++ LIE+R ARKNKDF+ +D+IR DL
Sbjct: 429 CDVLGIITE---------------RKTEILDSEIEDLIEQRTQARKNKDFALADKIRNDL 473
Query: 492 TRKGIALMDMGKETIWR 508
+GI L D + W+
Sbjct: 474 LDRGIVLEDTREGVKWK 490
>gi|387890094|ref|YP_006320392.1| cysteinyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|414592245|ref|ZP_11441897.1| cysteinyl-tRNA synthetase [Escherichia blattae NBRC 105725]
gi|386924927|gb|AFJ47881.1| cysteinyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|403196768|dbj|GAB79549.1| cysteinyl-tRNA synthetase [Escherichia blattae NBRC 105725]
Length = 461
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 281/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRFLGYRL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKIIRRA++ GE L +R E D A L LPP +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIRRASENGEAFTDLVDRMIGEMHKDFAALNILPPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F+V P YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITEQLIARGHAYVADNGDVMFSVPTDPGYGVLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + +P AR F M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKEAAPAGGEAFEAR---------------FREAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + Q + +RK+ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKAEDMAQAN-QMAAHMRKLAS-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R L G
Sbjct: 394 LEQEPEAFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|419718461|ref|ZP_14245778.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
gi|383305296|gb|EIC96664.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
Length = 469
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/497 (41%), Positives = 297/497 (59%), Gaps = 37/497 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+N+++++KE F PI GKV MYVCG T Y+L H+G+AR + FD + RY E+ EV
Sbjct: 1 MKIFNTLSRRKEEFVPIEEGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII +A + G + +S RY E DMA + LP T P + +E +
Sbjct: 61 NYVSNFTDVDDKIINKAIEEGVDAAVISQRYINECKKDMAAMNVLPATKNPLATQEIEGM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
+DMI ++I + AYV +G V+F V+ +YG+LS + ++ ++G R V + K +
Sbjct: 121 EDMIGKLIESGHAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVTGEDGKEDS 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK K GEP W+SPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENE
Sbjct: 181 NDFVLWKPKKEGEPYWESPWSKGRPGWHIECSVMSKKYLGEQIDIHGGGEDLIFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS +A S +YWMHN + +N+KMSKS GNFFT+R I+E+Y LR F++SAHY
Sbjct: 241 IAQSESASGKSFANYWMHNAFLNIDNKKMSKSAGNFFTVRDISEKYDLQVLRFFMLSAHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA--AEDCINK-LRD 371
RSPLN+S +++A +++ I + + + ++ TA I A A I K L+D
Sbjct: 301 RSPLNFSAELMEAAKNSLERILTGMDNIKTVIA----RNNTAPITDAELANLEIAKVLKD 356
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
+F M DD NT+ ++ F+ +K N++L+ + S +E + + N ++ +
Sbjct: 357 KFADAMDDDFNTADAVSAIFE-LIKLSNTTLS----------ENSTVEYAKGLLNVIEPL 405
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LG++ ++ E+ + ++ LI R ARKNKDF+ +D+IR DL
Sbjct: 406 CDVLGIITE---------------RKTEILDSEIEDLIARRTQARKNKDFALADKIRNDL 450
Query: 492 TRKGIALMDMGKETIWR 508
KGI L D + W+
Sbjct: 451 LEKGIVLEDTREGVKWK 467
>gi|423692284|ref|ZP_17666804.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
gi|388002211|gb|EIK63540.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
Length = 460
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/491 (42%), Positives = 282/491 (57%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++++ KE+F P+ KV MYVCG+T YD H+GH R+ V+FDL+ R+L ++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE+ +L+ R D A L L P +PR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKA K GEPSW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + + WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ Y L+ A++P AR F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD T F+ + +N L++ I++ + +KE+ +LG+
Sbjct: 346 NDDFGTPEACAVLFE-----MVREINRLRETD--------IDAAAGLAARLKELASVLGV 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E L+ A R + E D LI+ R AAR NKD+++SD+IR LT G+
Sbjct: 393 LQ----MEADDFLQAGAEGRVDAAEVDA--LIQARLAARSNKDWAESDRIRDQLTAMGVV 446
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 447 LEDGKGGTTWR 457
>gi|296333091|ref|ZP_06875545.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672793|ref|YP_003864464.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149707|gb|EFG90602.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411036|gb|ADM36154.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 466
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/497 (41%), Positives = 281/497 (56%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPAISERFIKAYFEDVGALGCRKADLHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D + Q++ AY EGDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIDFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ A + A S Q H + N +D + + R
Sbjct: 301 PINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F D K N L K + IE +I
Sbjct: 353 AFEEAMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI------- 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +LG +L EL ++++ LIE+R AR+N+DF+ SDQIR L
Sbjct: 403 VSVLGF----------------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMNIILEDTAQGTRWK 463
>gi|161830739|ref|YP_001597327.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
gi|187629808|sp|A9N924.1|SYC_COXBR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|161762606|gb|ABX78248.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
Length = 458
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/491 (42%), Positives = 285/491 (58%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+NS+T+QKE+F PI GKV +YVCG+T YD H+GH R+ + FD++ RYL EV
Sbjct: 1 MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E+P +L+ R+ Q D L+ L P +PR + ++ +I
Sbjct: 61 TFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++++N AY + GDVFF V + +YG+LS + L+ +AG RV V KR+P DF
Sbjct: 121 IKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDKLQAGARVEVSDSKRDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP WDSPWG GRPGWHIECSAMS+ L FDIHGGG+DL FPHHENEIAQ
Sbjct: 181 VLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V WMH G + N EKMSKSLGN +IR+ + LR+FL+S HYR+P
Sbjct: 241 SEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYRNP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS L++ A+ Y L+ P H KT+ D F+ M
Sbjct: 301 LSYSKENLENGRLALERFYLALRGL-----PVVNHEKTSSYT-----------DRFYEAM 344
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT F+ + +N + ++ L L+ + N I GL
Sbjct: 345 DDDFNTPIAFALLFE-----MVREINRFRDNNQIEKAAVLAAELKCLGN-------IFGL 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L YS +Q A K A++ E + +LI++R AR KD+ +DQIR LT G+A
Sbjct: 393 L---QYSP--EQFLQGAKKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDLGVA 445
Query: 498 LMDMGKETIWR 508
+ D T WR
Sbjct: 446 IEDSSDGTSWR 456
>gi|359437267|ref|ZP_09227337.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|359446712|ref|ZP_09236363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
gi|392554148|ref|ZP_10301285.1| cysteinyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
gi|358028091|dbj|GAA63586.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358039518|dbj|GAA72612.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
Length = 459
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 282/493 (57%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL HL ++
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ GE L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDVDDKIIKRANENGEAINDLTVRMTKAMHEDFDSLNMLRPDVEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IAMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ ++Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+ E + + A+ F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRGVEPVECELEGNEYVAK---------------FRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD N+ L F+ + LN +K ES + + VLR LG
Sbjct: 347 NDDFNSPEALPVVFE-----VAKELNRVK------------ESDSEKAGHLAFVLRSLGE 389
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+ + QQ + L+ + +E ++ LI +R AR +K+++ +D+ R L G
Sbjct: 390 ILG-----IAQQAPEAFLQGGQNDDEVAEIEALIVKRNDARASKNWAAADEARDALNALG 444
Query: 496 IALMDMGKETIWR 508
+ L D +T WR
Sbjct: 445 VILEDSAGKTTWR 457
>gi|51595384|ref|YP_069575.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186894407|ref|YP_001871519.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
gi|61216168|sp|Q66DK9.1|SYC_YERPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558803|sp|B2K7N2.1|SYC_YERPB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|51588666|emb|CAH20275.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186697433|gb|ACC88062.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 461
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 280/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKLAQVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR +K+++ +D R L G
Sbjct: 394 LEQDPELFLQGGAQADDDEVAKIE-------ALIKQRNDARSSKNWALADAARDQLNDLG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|425738224|ref|ZP_18856490.1| cysteinyl-tRNA ligase [Staphylococcus massiliensis S46]
gi|425480234|gb|EKU47402.1| cysteinyl-tRNA ligase [Staphylococcus massiliensis S46]
Length = 467
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/482 (42%), Positives = 291/482 (60%), Gaps = 27/482 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ +YN++T+QKE F PI PGKV MYVCG T Y+ H+G+AR A+ +D++ RY E+ EV
Sbjct: 2 ITLYNTLTRQKETFKPIEPGKVKMYVCGPTVYNYIHIGNARPAICYDVVRRYFEYQGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDK+I+R+N+LGE+ ++ RY + + D L T PRV DHM+ I
Sbjct: 62 EYVSNFTDVDDKLIKRSNELGESVPDIAERYIKAFYEDTGALHVKKATSNPRVMDHMDNI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D I ++++ AY GDV+F K YG+LS Q +++ + G R+ +K + DF
Sbjct: 122 IDFIKELVDKGYAYESGGDVYFRTRKFDGYGKLSHQSIDDLKVGARIETGEQKEDALDFT 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GE SWDSP+G GRPGWHIECS M+ H L DIH GG DL FPHHENEIAQS
Sbjct: 182 LWKKAKPGEISWDSPFGEGRPGWHIECSVMAYHELGPTIDIHAGGSDLQFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A ++ +YWMHNG + NNEKMSKSLGNF + I + P LR F+IS HYRSP+
Sbjct: 242 EAHNCETFANYWMHNGFININNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NY++ +D+A + + +++ AL E + + A +D +++ +F M+
Sbjct: 302 NYNLELVDAARSGL----ERIRNSYEALRTRLETSVDIKSHDAHKDEADQILAQFEKVMN 357
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT++ +T A+ D K N + +Q + ++ L+++ EV E++
Sbjct: 358 DDFNTANAIT-AWYDLAKLSN---------KYNLEQSTSVDVLKRL-MEVHEII------ 400
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
S+VL +KA K EL +E++ LIEER AR+ K+F ++D+IR L K I L
Sbjct: 401 -----SDVLGVPLEKASKE-ELLDEEIEALIEERNEARQQKNFERADEIRDLLKEKNIIL 454
Query: 499 MD 500
D
Sbjct: 455 ED 456
>gi|443635010|ref|ZP_21119181.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443345201|gb|ELS59267.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 466
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 282/497 (56%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTIRNYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++S+R+ + Y D+ L C PRV ++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTISDRFIKAYFEDVGALGCRKADLHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + + Q++ AY EGDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRD 371
P+NYS L++ A + A S Q H + N +D + + R
Sbjct: 301 PINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDGQWLEKVEEQRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F D K N L K + IE +I
Sbjct: 353 AFEEAMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVIKAFIEMFDRI------- 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +LG +L EL ++++ LIE+R AR+N+DF+ SDQIR L
Sbjct: 403 VSVLGF----------------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMNIILEDTAQGTRWK 463
>gi|425744739|ref|ZP_18862794.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425490335|gb|EKU56635.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 473
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/491 (41%), Positives = 298/491 (60%), Gaps = 29/491 (5%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G++ MYVCG+T YD H+GHAR V+FD + R+L +V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
+RN TD+DDKII RAN+ GE+ L+ R+ D A+L C P P+ +++++Q++
Sbjct: 66 IRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAANLGCAAPDEAPKATEYIDQMQS 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI +++ AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF
Sbjct: 126 MINTLVDKGAAYPSSNGDVYFEVSKFDKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S + L A A+ Y + + +Q+ I ++ + + F+ M
Sbjct: 306 VNFSDVALKEAKTALSRFYHSFK-------AYQQVYGQKTIETLEQNFVER----FNNAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F+ +N LN K++ +Q +L +LR + + ILGL
Sbjct: 355 CDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQATALYSTLRHLTH-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+ + + +AL L++ D+ I++R A+K KDF+K+D IR L +G+
Sbjct: 403 VQHDVDEFLKSDIGQEALS---LSDADIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVV 459
Query: 498 LMDMGKETIWR 508
L D + TIWR
Sbjct: 460 LEDTRQGTIWR 470
>gi|153209422|ref|ZP_01947398.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165919402|ref|ZP_02219468.1| cysteinyl-tRNA synthetase [Coxiella burnetii Q321]
gi|187629807|sp|A9KBJ2.1|SYC_COXBN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120575359|gb|EAX31983.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165916918|gb|EDR35522.1| cysteinyl-tRNA synthetase [Coxiella burnetii Q321]
Length = 458
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/491 (42%), Positives = 285/491 (58%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KI+NS+T+QKE+F PI GKV +YVCG+T YD H+GH R+ + FD++ RYL EV
Sbjct: 1 MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + E+P +L+ R+ Q D L+ L P +PR + ++ +I
Sbjct: 61 TFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEI 120
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++++N AY + GDVFF V + +YG+LS + L+ +AG RV V KR+P DF
Sbjct: 121 IKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSDSKRDPLDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP WDSPWG GRPGWHIECSAMS+ L FDIHGGG+DL FPHHENEIAQ
Sbjct: 181 VLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V WMH G + N EKMSKSLGN +IR+ + LR+FL+S HYR+P
Sbjct: 241 SEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYRNP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS L++ A+ Y L+ P H KT+ D F+ M
Sbjct: 301 LSYSKENLENGRLALERFYLALRGL-----PVVNHEKTSSYT-----------DRFYEAM 344
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT F+ + +N + ++ L L+ + N I GL
Sbjct: 345 DDDFNTPIAFALLFE-----MVREINRFRDNNQIEKAAVLAAELKCLGN-------IFGL 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L YS +Q A K A++ E + +LI++R AR KD+ +DQIR LT G+A
Sbjct: 393 L---QYSP--EQFLQGAKKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDLGVA 445
Query: 498 LMDMGKETIWR 508
+ D T WR
Sbjct: 446 IEDSSDGTSWR 456
>gi|428204512|ref|YP_007083101.1| cysteinyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
gi|427981944|gb|AFY79544.1| cysteinyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
Length = 484
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/506 (41%), Positives = 301/506 (59%), Gaps = 40/506 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TLK+YN++T+++E F P+ PGKV MY CG+T YD HLGHAR + +D++ RYLE
Sbjct: 1 MTLKLYNTLTRREEPFEPLEPGKVRMYCCGITVYDYCHLGHARTCIVWDVVRRYLEWRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDKI+ RA G + +S R+ Q Y DM L+ PR + ++
Sbjct: 61 EVKYVQNFTDIDDKILNRARQEGISMEEVSERFIQAYFEDMERLKVKKADDYPRATHTID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD------SR 190
I+ ++ ++ AY GDV++ V + P+YG+LSG++LE+ +AG VD +
Sbjct: 121 GIERLVCELEQKGYAYRTNGDVYYCVCRFPSYGKLSGRKLEDLQAGASGRVDLEDPENQK 180
Query: 191 KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPH 250
K+NPADFALWKAAK GEPSWDSPWG GRPGWHIECSAM L DIH GG DLIFPH
Sbjct: 181 KKNPADFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMVREKLGETIDIHVGGSDLIFPH 240
Query: 251 HENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
HENEIAQS A YWMHNG V EKMSKSLGNF TIR + ER P+A+R F++
Sbjct: 241 HENEIAQSEAVTGKPLARYWMHNGMVKVEGEKMSKSLGNFITIRDLLERVEPMAVRLFIL 300
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR 370
AHYR PL+++ L++A++ + TL++ L +G+ +P E+ +K++
Sbjct: 301 QAHYRKPLDFTDEALEAATNG----WHTLRE---GLLFGHRYGEQLGWDPIQENSQSKIQ 353
Query: 371 D----EFHARMSDDLNTSHILTGAFQDALKFINSSLNML----KKKQPKQQQLSLIESLR 422
+ F + +D N + L F+ K + N+L K + P Q+ L
Sbjct: 354 NLLEQRFQEAVDNDFNFAGGLAVLFEITKKLVKEG-NLLVHEGKTETPPQE-------LE 405
Query: 423 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 482
+ + E+ ++LGL +E ++Q L AE+ + LI++RA ARK K+++
Sbjct: 406 QQWRTLVELAQVLGL-----EAEAIEQEATGGLSDAEIED-----LIQKRAEARKAKNWA 455
Query: 483 KSDQIRADLTRKGIALMDM-GKETIW 507
+SD+IR L +GI L+D G T W
Sbjct: 456 ESDRIRDQLKAQGIVLIDQPGGVTRW 481
>gi|340787525|ref|YP_004752990.1| cysteinyl-tRNA synthetase [Collimonas fungivorans Ter331]
gi|340552792|gb|AEK62167.1| Cysteinyl-tRNA synthetase [Collimonas fungivorans Ter331]
Length = 473
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/496 (42%), Positives = 289/496 (58%), Gaps = 34/496 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++K+ F+PI PGKV MYVCG+T YD HLGH R V FD++ R+L +V
Sbjct: 4 LKIYNTLAREKQPFSPIEPGKVRMYVCGMTVYDYCHLGHGRVMVVFDMVQRWLRQSGLDV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + GE L+ R+ Q D A L P ++PR + + Q+
Sbjct: 64 TYVRNITDIDDKIIKRAVENGETISQLTGRFIQAMDEDAAALGVQKPDHEPRATAFVPQM 123
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++ + AY +GDV ++V YG+LSG+ L++ RAGERV V+ KR+P DF
Sbjct: 124 LALIEKLEHKGLAYQGSDGDVNYSVRDFAGYGKLSGKSLDDLRAGERVDVNLGKRDPLDF 183
Query: 198 ALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKAAK EP W S WG GRPGWHIECSAM+ L +FDIHGGG DL FPHHENE
Sbjct: 184 VLWKAAKDSEPEEVKWTSRWGQGRPGWHIECSAMAEQLLGEQFDIHGGGQDLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A V+YWMHNG V ++EKMSKSLGNFFTIR + ++Y +R F++ AHY
Sbjct: 244 IAQSEGAHGHRFVNYWMHNGFVRIDDEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEF 373
RSPLNY+ LD A A+ +Y L++ P AR+ A
Sbjct: 304 RSPLNYADSNLDDAKHALTRLYTALKEVSADSLPLDWSEAHAARVAQA------------ 351
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT ++ F + + +N + + +Q L L ++ ++ L+
Sbjct: 352 ---MDDDFNTPMAISALFD-----LANEVNKNRSQAAARQLKGLAGVLGLLQRSPEDFLK 403
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
L A EV+ + +A L+E+D+L I+ R AA+ KDFS +D IR +L
Sbjct: 404 GRAL----AGGEVV----GNGIAQAALSEQDILLKIQTRQAAKIAKDFSAADLIRKELLA 455
Query: 494 KGIALMDM-GKETIWR 508
+GI L D G +T WR
Sbjct: 456 EGILLEDKPGGQTEWR 471
>gi|308275277|emb|CBX31873.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 413
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/425 (44%), Positives = 274/425 (64%), Gaps = 22/425 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN++ ++K F P+ PGKV MYVCG T YD H+GHAR+ + FD++ +YL
Sbjct: 1 MSLRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYVRNFTDVDDKII RA LG ++ RY +E+ DM L T +P+ ++H++
Sbjct: 61 EVTYVRNFTDVDDKIINRAVQLGIESHEVAERYIKEFYEDMDALNIKRATIEPKATEHID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I +I ++ + AY ++GD++++V+K +YG+LSG++LE+ AG RV +D RK NP D
Sbjct: 121 KIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDERKNNPFD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+ K GEP W+SPWG GRPGWHIECSAMS+ YL FDIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG V N+EKMSKSLGNF I+ I + YHP ++R FL+S HYRS
Sbjct: 241 QSEGAFEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDILKSYHPDSVRLFLLSNHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDEF 373
P++++ ++ + A+ IY +Q E + A I +D IN ++F
Sbjct: 301 PIDFTDKAMEESEAALDKIYSAIQRVE----------EIADI--TGKDFINYPEGYWEKF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ + G D+++ IN +L + + ++I S I +++++
Sbjct: 349 CESMDDDFNTAKGI-GYLFDSVRHIN---RLLDENSNSDEIKTIINS---IYADIRKMGD 401
Query: 434 ILGLL 438
++G+L
Sbjct: 402 VIGIL 406
>gi|295694815|ref|YP_003588053.1| cysteinyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
gi|295410417|gb|ADG04909.1| cysteinyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
Length = 476
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/501 (42%), Positives = 284/501 (56%), Gaps = 38/501 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ ++++N++T++KE+F P PG V MY CG T YD H+G+ARA V FDL+ RYL +
Sbjct: 1 MPIRVFNTLTKRKEVFEPQEPGVVKMYCCGPTVYDYFHIGNARAFVVFDLVRRYLRYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
VTYV+NFTDVDDKIIRRA + L+ +Y + Y D A L P QPRV+ HM
Sbjct: 61 RVTYVQNFTDVDDKIIRRAAEEHMAVQDLAEKYIRAYFEDAAALGIEPADVQPRVTMHMH 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I DMI +++ AY ++ DV+F + P+YG+LSGQ AG RV VD RKR+P D
Sbjct: 121 EIIDMIQALLDKGFAYRIQEDVYFDTSRDPDYGKLSGQDPAALMAGARVEVDERKRHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK +K GE +WDSPWG GRPGWHIECSAMS YL DIH GG DLIFPHHENEIA
Sbjct: 181 FALWKGSKPGEVAWDSPWGKGRPGWHIECSAMSRTYLGDTLDIHAGGQDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS YWMHNG++ N KMSKSLGN T+R++ +R P A+R +L+SAHYR
Sbjct: 241 QSECVTGHPFARYWMHNGYLQWNRVKMSKSLGNVVTVRELLKRVRPHAIRLYLLSAHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSP--------FQEHGKTARINPAAE-DCIN 367
PLN+S+ L+ A + I +L+D L P +E G P E D +
Sbjct: 301 PLNFSLELLEQADRGLERIESSLRDLGDWLGPDSSLTGAVTEESGHV----PGLEVDEVQ 356
Query: 368 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
++ +++ M DD NT+ L GA + + N ++ + K Q L
Sbjct: 357 RIHEKWTEAMDDDFNTAEAL-GALYEGVGLANRAIREQDVTRAKAWQGWLSYH------- 408
Query: 428 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
R +GL+ G K +E E + LI RA ARK +D++ +D+I
Sbjct: 409 ----ARFMGLIADGQ-------------KESETEREKIEALIARRAEARKKRDWAAADRI 451
Query: 488 RADLTRKGIALMDMGKETIWR 508
R L+ GI L D WR
Sbjct: 452 RDQLSEMGIVLEDTPYGVRWR 472
>gi|319649137|ref|ZP_08003345.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
gi|317388837|gb|EFV69656.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
Length = 463
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/492 (41%), Positives = 283/492 (57%), Gaps = 37/492 (7%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YN++T++KE F P+ GKV MYVCG T Y+ H+G+AR A+ FD + +YLE+ EV Y
Sbjct: 1 MYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGYEVQY 60
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
V NFTDVDDK+I+ AN+LGE ++ R+ + Y D+ L C PRV+++M++I D
Sbjct: 61 VSNFTDVDDKLIKAANELGEEVPVIAERFIKAYFEDVGSLGCTKADCHPRVTENMDEIID 120
Query: 141 MITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALW 200
I +I+ AY +GDV++ YG+LS Q ++ R+G R+ V +K + DF LW
Sbjct: 121 FIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKEDALDFTLW 180
Query: 201 KAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA 260
KAAK E SWDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A
Sbjct: 181 KAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHENEIAQSEA 240
Query: 261 ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 320
YW+HNG++ +NEKMSKSLGNF + I + + P LR F++S HYR P+NY
Sbjct: 241 LTGKPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKEHDPQVLRFFMLSVHYRHPINY 300
Query: 321 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKL---RDEFHAR 376
SV L++ +A + A S Q K++ + + + K+ R F
Sbjct: 301 SVELLENTKNA-------FGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIEEQRKAFQTA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT++ ++ F D K N L Q K +I++ ++ E+ +LG
Sbjct: 354 MDDDFNTANAISVLF-DLAKHANYYL------QEKNTAEHVIQAFIQL---FDEICSVLG 403
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+LK EL ++D+ +LIE+R AR+N+DF+ SDQIR L I
Sbjct: 404 F----------------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNI 447
Query: 497 ALMDMGKETIWR 508
L D + T W+
Sbjct: 448 ILEDTPQGTRWK 459
>gi|398309196|ref|ZP_10512670.1| cysteinyl-tRNA ligase [Bacillus mojavensis RO-H-1]
Length = 466
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/497 (40%), Positives = 282/497 (56%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTIRNYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I Q++ AY EGDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIDFIDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ A + A S Q H + N +D I + R
Sbjct: 301 PINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDKWVAKIEEHRT 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F A N++ + + + I+ +I
Sbjct: 353 AFEEAMDDDFNTANAISVLFDLAK---NANYYLQEDHTADHVITAFIDMFDRI------- 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +LG +L EL ++++ LIE+R AR+N+DF+ SDQIR L
Sbjct: 403 VSVLGF----------------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMNIILEDTAQGTRWK 463
>gi|389852533|ref|YP_006354767.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
gi|388249839|gb|AFK22692.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
Length = 451
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/470 (42%), Positives = 276/470 (58%), Gaps = 26/470 (5%)
Query: 42 MYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTYVRNFTDVDDKIIRRANDLGEN 101
MYVCG T YD HLGHAR ++FD++ RYLEH V V NFTD+DDKIIRRAN+ GE+
Sbjct: 1 MYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYTVLMVMNFTDIDDKIIRRANETGED 60
Query: 102 PLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFA 161
P L+ ++ + +L DM L+ P PRV++H+E I I ++I AY V+F
Sbjct: 61 PKELAEKFIKVFLEDMRALKVKPADIYPRVTEHIEDIIRFIEKLIEKGYAYEGSDGVYFE 120
Query: 162 VEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGW 221
V+K YG+LSG ++E R G RV K+NP DFALWK AK GEP W+SPWG GRPGW
Sbjct: 121 VQKFSEYGKLSGIKIEELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGDGRPGW 180
Query: 222 HIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNE 281
HIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V YW+H G V E
Sbjct: 181 HIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVRYWLHTGFVMVKGE 240
Query: 282 KMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD 341
KMSKSLGNF T+R++ +RY+P +R F++ HYRSPL+Y+ L A + + +Y TL++
Sbjct: 241 KMSKSLGNFVTVRELLQRYNPEVIRFFVLQKHYRSPLDYTEEGLQHAKNNLERLYNTLEN 300
Query: 342 CEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 401
A+ + A + I + +F+ M DD NT+ L F+ ++++
Sbjct: 301 IRTAMKEAELSYTWGEEEFEAYEAIKSAKRKFYEAMDDDFNTAEALKAVFE-----VSNA 355
Query: 402 LN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE 459
+N + + ++PK+ L + E +I+ SE+ +D +
Sbjct: 356 INRYLTEVERPKESVL----------RKAWEFFKIV--------SEIFGIFEDYFKEEKV 397
Query: 460 LTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 508
EE +++ L+E R+ RK K + +D+IR +L + GI L D +TIW+
Sbjct: 398 GEEEKLIELLVEVRSQLRKEKKYDLADKIREELRKLGIQLEDKKDKTIWK 447
>gi|304315919|ref|YP_003851064.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777421|gb|ADL67980.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 464
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/490 (39%), Positives = 296/490 (60%), Gaps = 28/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ +V
Sbjct: 1 MKIYNTLTRKKEEFVPLNDNIVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDK+I+R+++ L++RY +EY D L T PR +++++ I
Sbjct: 61 NYVQNFTDIDDKLIKRSHEENTTVKELADRYIEEYFKDADSLGIKRATVHPRATENIDDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ + ++I+ AYV+ GDV++ K YG+LS + ++ +AG R+ V+ K+NP DF
Sbjct: 121 INFVKKLIDKGFAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARIEVNEDKKNPTDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +WMH G++ NNEKMSKS NFFT+R IT +Y P LR F++++HYR+P+
Sbjct: 241 EAANDAEFARFWMHIGYLNINNEKMSKSKNNFFTVRDITSQYDPEVLRFFMLTSHYRNPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ + + T+ + L + + + A ++ ++ + F M
Sbjct: 301 NFSHDLLEQSKSGFLRLSNTVDNLRHLLDDALDR-ELSDEEKAYKEKYDEYKRRFEEAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F+ ++ IN++++ PK+ LIE + I ++ VL I
Sbjct: 360 DDFNTADAISVLFE-MVRDINTNID---GNSPKE----LIEYILDIFLKLSSVLGI---- 407
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
+ K+ +L ++++ +LIE+R ARK K+++++D+IR +L ++GIAL
Sbjct: 408 ---------------SYKKRDLLDDEIKKLIEKREEARKAKNWAEADKIRDELKKQGIAL 452
Query: 499 MDMGKETIWR 508
D W+
Sbjct: 453 EDTPSGVRWK 462
>gi|16077162|ref|NP_387975.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307906|ref|ZP_03589753.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312227|ref|ZP_03594032.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317161|ref|ZP_03598455.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321424|ref|ZP_03602718.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|402774337|ref|YP_006628281.1| cysteinyl-tRNA synthetase [Bacillus subtilis QB928]
gi|452916597|ref|ZP_21965219.1| cysteine--tRNA ligase [Bacillus subtilis MB73/2]
gi|549024|sp|Q06752.1|SYC_BACSU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|289284|gb|AAA21798.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
gi|467482|dbj|BAA05328.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
gi|499303|emb|CAA52167.1| cysteine--tRNA ligase [Bacillus subtilis subsp. subtilis str. 168]
gi|2632361|emb|CAB11870.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|402479523|gb|AFQ56032.1| Cysteinyl-tRNA synthetase [Bacillus subtilis QB928]
gi|407955785|dbj|BAM49025.1| cysteinyl-tRNA synthetase [Bacillus subtilis BEST7613]
gi|407963056|dbj|BAM56295.1| cysteinyl-tRNA synthetase [Bacillus subtilis BEST7003]
gi|452114506|gb|EME04906.1| cysteine--tRNA ligase [Bacillus subtilis MB73/2]
Length = 466
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 281/497 (56%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + + Q++ AY EGDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ A + A S Q H + N +D + + R
Sbjct: 301 PINYSEELLENTKSA-------FSRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F D K N L K + IE +I
Sbjct: 353 AFEEEMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI------- 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +LG +L EL ++++ LIE+R AR+N+DF+ SDQIR L
Sbjct: 403 VSVLGF----------------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMNIILEDTAQGTRWK 463
>gi|373859609|ref|ZP_09602335.1| cysteinyl-tRNA synthetase [Bacillus sp. 1NLA3E]
gi|372450604|gb|EHP24089.1| cysteinyl-tRNA synthetase [Bacillus sp. 1NLA3E]
Length = 465
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/498 (40%), Positives = 293/498 (58%), Gaps = 41/498 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T++IYN++T++KE F PI PGK+ MYVCG T Y+ H+G+AR A+ FD + RY E
Sbjct: 1 MTIQIYNTLTRKKEEFVPIEPGKIKMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEFRGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V ++ NFTDVDDK+I+ A LGE+ +++NR+ Y D++ L C PRV+++M+
Sbjct: 61 DVQFISNFTDVDDKLIKAAKTLGEDVPTIANRFIDAYFEDVSALGCKQANVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I+++++ AY GDV+F K YG+LS Q ++ + G R+ V +K++ D
Sbjct: 121 IIIDFISELVDKGFAYESAGDVYFRTRKFEGYGKLSHQSIDELKVGARIDVGEKKQDDLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAKAGE +W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKAGEIAWESPWGMGRPGWHIECSAMAKKYLGDTIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A YWMHNG++ +NEKMSKSLGNF + I +++ P +R F++S HYR+
Sbjct: 241 QSEALSGKPFARYWMHNGYINIDNEKMSKSLGNFVLVHDIIKKHAPEVVRFFMLSVHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ A+ + + Q+ +H A N D I+ L+
Sbjct: 301 PINYSDELLENTKAALERLKTSYQNL--------KHRIDASTNLTENDQEWIGKISDLQG 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLN-MLKKKQPKQQQLSLIESLRKIENEVKE 430
EF M DD+NT++ ++ F+ ++ N L +K + ++ SL ++
Sbjct: 353 EFIREMDDDINTANGISVLFE-----LSKQANYYLLEKNTSTEVINAFTSL------FEK 401
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+ +LGL +L+ EL + ++ LIE+R ARKN+DF SDQIR
Sbjct: 402 LFGVLGL----------------SLENQELLDIEIETLIEQRIEARKNRDFQLSDQIRDQ 445
Query: 491 LTRKGIALMDMGKETIWR 508
L I L D + T W+
Sbjct: 446 LKDMNIILEDTPQGTRWK 463
>gi|395649608|ref|ZP_10437458.1| cysteinyl-tRNA ligase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 462
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/491 (43%), Positives = 284/491 (57%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++++ KE+F P+ KV MYVCG+T YD H+GH R+ V+FDL+ R+L ++
Sbjct: 2 LTIYNTLSKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE+ +L+ R D A L L P +PR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW+SPWGPGRPGWHIECS MS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + + WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ Y L+ A++P AR F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD T F+ + +N L++ S +++ + +KE+ +LG+
Sbjct: 346 NDDFGTPEACAVLFE-----MVREINRLRE--------SDLDAAAGLAARLKELASVLGV 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E L+ A R + TE D LI+ R AAR NKD+++SD+IR LT G+
Sbjct: 393 LQ----MEADDFLQAGAEGRVDATEVDA--LIQARLAARVNKDWAESDRIRDQLTAMGVV 446
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 447 LEDGKGGTTWR 457
>gi|254252008|ref|ZP_04945326.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
gi|124894617|gb|EAY68497.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
Length = 465
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 291/499 (58%), Gaps = 46/499 (9%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K++F P G+V MYVCG+T YD H+GHAR V FDL+ R+L +
Sbjct: 3 SLRIYNTLARDKQVFVPRRSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYR 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + GE SL++R+ D L P +PR + + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDEDALGIQRPDIEPRATQFIPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI Q+ +N AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P D
Sbjct: 123 MLGMIEQLESNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK AK +P SW+S +G GRPGWHIECSAM L FDIHGGG DL FPHHEN
Sbjct: 183 FVLWKRAKPEDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ H
Sbjct: 243 EIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRFFIVRTH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAEDCINKLR 370
YRSPLNYS + LD A ++ +Y L+D E +AL + H +
Sbjct: 303 YRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWSEPHAQ---------------- 346
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
F A M+DD NT + F+ A + +N + + +Q KQ L R+
Sbjct: 347 -RFAAAMNDDFNTPVAIATLFELAGE-VNRTRDASLARQLKQLAGLLGLLGRE------- 397
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
P A+ LQQ A + L +++ I R AA++ KD++++D+IRA+
Sbjct: 398 ---------PRAF---LQQASGAA-RDGGLAADEIEAKIAARVAAKQAKDYAEADRIRAE 444
Query: 491 LTRKGIALMDM-GKETIWR 508
L GIAL D G T WR
Sbjct: 445 LLDAGIALEDKPGGSTEWR 463
>gi|432328526|ref|YP_007246670.1| cysteinyl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
gi|432135235|gb|AGB04504.1| cysteinyl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
Length = 458
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/492 (41%), Positives = 287/492 (58%), Gaps = 43/492 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IY++++ ++ F P PG+VG+YVCG T YD +H+GHAR A+ FD+L R+LE++ +V
Sbjct: 4 IYIYDTLSGERRKFEPFHPGRVGIYVCGPTTYDYAHIGHARPAIMFDVLRRFLEYMGYDV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+ N TDVDDKII +AN+LG++P+ +++ Y QEYL DM L+ P P+ + HME+I
Sbjct: 64 ILISNITDVDDKIINKANELGKDPIEMAHYYAQEYLKDMDSLRVRRPNIIPKATRHMEEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+++ +I AY GDV+F+VEK NYG+LS +++E+ AG RV V +KRNP DFA
Sbjct: 124 INLVKTLIEKGYAYESGGDVYFSVEKFKNYGKLSHRKMEDMLAGARVEVSDKKRNPLDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP W SPWGPGRPGWHIECSAMS YL S DIHGGG DLIFPHHENEIAQS
Sbjct: 184 LWKAAKPGEPHWPSPWGPGRPGWHIECSAMSMTYLGSTLDIHGGGADLIFPHHENEIAQS 243
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMH G V EKMSKS+GN F IR ++Y P LR +++HYR P
Sbjct: 244 EAATGKPFARYWMHVGLVRFEKEKMSKSIGNVFLIRDFLKKYPPEVLRLMYLNSHYRKPY 303
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHA 375
++S I T+ E S +Q K+A A+E ++R+ +
Sbjct: 304 DFSEKN----------ITDTIPLLEKIWSTYQILKKSASGGDASEQTKMRIRNAKRSIIS 353
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+SDD NT A + L F+N + ++ P + + +E L +++ I
Sbjct: 354 ALSDDFNTRE----ALAEYLNFVNYAKDL---HGPDAR--AALEFLGEMD-------YIF 397
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LLP G + ++L + L+E R R+ K++ +D IR L + G
Sbjct: 398 DLLPRGTGGDKEEKL--------------IGLLLEVRNEERRRKNYDIADYIREQLEKMG 443
Query: 496 IALMDMGKETIW 507
I + D + T W
Sbjct: 444 IKIEDTKEGTRW 455
>gi|150402240|ref|YP_001329534.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
gi|166200151|sp|A6VG07.1|SYC_METM7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150033270|gb|ABR65383.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
Length = 476
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/487 (41%), Positives = 283/487 (58%), Gaps = 22/487 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LK+YN++T+++E F P+ +V MYVCG T YD +HLGH R VSFD++ RYLEH+ V
Sbjct: 2 LKVYNTLTRKEEEFKPLNENEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
V NFTD+DDKII+R+ + G+NP LS + +L DMA L+ P P+V++H+ +I
Sbjct: 62 NLVINFTDIDDKIIKRSQEKGKNPKELSETFVNVFLNDMATLKVKPADIYPKVTEHIPEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I ++I AY E V+F V+K NYG+LS LE+ +G R+ K+NP DFA
Sbjct: 122 IAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLISGARIEPSDEKKNPEDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SP+G GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS
Sbjct: 182 LWKTAKPGEPKWESPFGEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP+
Sbjct: 242 VAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFITIEDISKEYDPEILRFFFIQRHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
+Y+ + + + IY +++ ++L ++ G D + + F+ M+
Sbjct: 302 DYTAESMSHVKNNLEKIYNVIENIRISLEKSEKSGIWNENEFLLYDILKNSKHNFYEAMN 361
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
D NT L F+ + +N L+++ K P + L L+ + +I+G
Sbjct: 362 SDFNTVEALKSVFEVS-NGVNKYLSLV--KTPSEGLL-----LKAF-----DFFKIVG-- 406
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIA 497
E+ ++ + +E +E ++ LIE R+ R K++ SD+IR L G
Sbjct: 407 ------EIFGLFENYFKESSESNDEGFVKFLIELRSDLRLQKNYEMSDKIRDGLKELGYQ 460
Query: 498 LMDMGKE 504
+ D KE
Sbjct: 461 IEDNPKE 467
>gi|334136720|ref|ZP_08510177.1| cysteine--tRNA ligase [Paenibacillus sp. HGF7]
gi|333605741|gb|EGL17098.1| cysteine--tRNA ligase [Paenibacillus sp. HGF7]
Length = 465
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/492 (42%), Positives = 288/492 (58%), Gaps = 29/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL+++N+MT++KE F P+ PGKV MYVCG T Y+ H+G+ R A+ FD++ RYL ++
Sbjct: 1 MTLRMFNTMTREKEEFKPLEPGKVKMYVCGPTVYNYIHIGNGRPAIFFDVVRRYLTYVGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVTYV NFTDVDDK+IR+A + GE L++R+ Y+ DM L+ P T PRV+D+ME
Sbjct: 61 EVTYVVNFTDVDDKLIRKAEETGETVQELADRFIAAYMEDMKTLRIEPATIHPRVTDNME 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I I ++ AY GDV++ + YG+LS Q L+ + G R+ VD RK NP D
Sbjct: 121 IIITFINSLVQQGFAYENGGDVYYRTSRFKEYGKLSHQNLDELQYGIRIEVDERKENPQD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE W SPWG GRPGWHIECSA+ YL DIHGGG+DL FPHHE EIA
Sbjct: 181 FVLWKAAKPGEVFWSSPWGNGRPGWHIECSALVHKYLGESIDIHGGGVDLTFPHHECEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YW+HN + +NEKMSKSLGN IR+I ++ P LR F++S+HYR+
Sbjct: 241 QTEAITGKPMAKYWLHNEFLNIDNEKMSKSLGNGVLIREIAKKIKPETLRFFMLSSHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLN+S L A + + I + + + L QE ++ E + ++ +F ++
Sbjct: 301 PLNFSEDGLTQAGNGLDRIQNCVTNLKHRLGIAQEDA----LDDQVEARVKEIEAQFISK 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT +T F D + N L QQ+ +LR I + +LG
Sbjct: 357 MDDDFNTPDAITAVF-DLVTEANRVL---------QQERVSAATLRLIMGRFRNFDSVLG 406
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+L A + EL +E++ LIEER AR+ K+++++D+IR LT KGI
Sbjct: 407 IL---------------AREEEELLDEEIEGLIEERNEARRAKNWARADEIRDLLTEKGI 451
Query: 497 ALMDMGKETIWR 508
L D + WR
Sbjct: 452 YLEDTPQGIRWR 463
>gi|218703810|ref|YP_002411329.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|293403647|ref|ZP_06647738.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298379257|ref|ZP_06989138.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300897246|ref|ZP_07115688.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|419937015|ref|ZP_14453934.1| cysteinyl-tRNA synthetase [Escherichia coli 576-1]
gi|432352190|ref|ZP_19595498.1| cysteinyl-tRNA synthetase [Escherichia coli KTE2]
gi|432400638|ref|ZP_19643398.1| cysteinyl-tRNA synthetase [Escherichia coli KTE26]
gi|432429676|ref|ZP_19672135.1| cysteinyl-tRNA synthetase [Escherichia coli KTE181]
gi|432459496|ref|ZP_19701660.1| cysteinyl-tRNA synthetase [Escherichia coli KTE204]
gi|432474545|ref|ZP_19716558.1| cysteinyl-tRNA synthetase [Escherichia coli KTE208]
gi|432521162|ref|ZP_19758327.1| cysteinyl-tRNA synthetase [Escherichia coli KTE228]
gi|432541381|ref|ZP_19778255.1| cysteinyl-tRNA synthetase [Escherichia coli KTE235]
gi|432630097|ref|ZP_19866047.1| cysteinyl-tRNA synthetase [Escherichia coli KTE80]
gi|432639646|ref|ZP_19875491.1| cysteinyl-tRNA synthetase [Escherichia coli KTE83]
gi|432664713|ref|ZP_19900309.1| cysteinyl-tRNA synthetase [Escherichia coli KTE116]
gi|432791775|ref|ZP_20025869.1| cysteinyl-tRNA synthetase [Escherichia coli KTE78]
gi|432797742|ref|ZP_20031770.1| cysteinyl-tRNA synthetase [Escherichia coli KTE79]
gi|432884493|ref|ZP_20099449.1| cysteinyl-tRNA synthetase [Escherichia coli KTE158]
gi|432910211|ref|ZP_20117338.1| cysteinyl-tRNA synthetase [Escherichia coli KTE190]
gi|433017483|ref|ZP_20205753.1| cysteinyl-tRNA synthetase [Escherichia coli KTE105]
gi|433051826|ref|ZP_20239063.1| cysteinyl-tRNA synthetase [Escherichia coli KTE122]
gi|433066735|ref|ZP_20253578.1| cysteinyl-tRNA synthetase [Escherichia coli KTE128]
gi|433157470|ref|ZP_20342345.1| cysteinyl-tRNA synthetase [Escherichia coli KTE177]
gi|433176977|ref|ZP_20361441.1| cysteinyl-tRNA synthetase [Escherichia coli KTE82]
gi|226735058|sp|B7N980.1|SYC_ECOLU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218430907|emb|CAR11781.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|291429500|gb|EFF02520.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298280370|gb|EFI21874.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300358974|gb|EFJ74844.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|388398419|gb|EIL59325.1| cysteinyl-tRNA synthetase [Escherichia coli 576-1]
gi|430880589|gb|ELC03874.1| cysteinyl-tRNA synthetase [Escherichia coli KTE2]
gi|430929358|gb|ELC49869.1| cysteinyl-tRNA synthetase [Escherichia coli KTE26]
gi|430947342|gb|ELC67043.1| cysteinyl-tRNA synthetase [Escherichia coli KTE181]
gi|430992580|gb|ELD08951.1| cysteinyl-tRNA synthetase [Escherichia coli KTE204]
gi|431010485|gb|ELD24833.1| cysteinyl-tRNA synthetase [Escherichia coli KTE208]
gi|431045716|gb|ELD55946.1| cysteinyl-tRNA synthetase [Escherichia coli KTE228]
gi|431064099|gb|ELD73297.1| cysteinyl-tRNA synthetase [Escherichia coli KTE235]
gi|431174616|gb|ELE74661.1| cysteinyl-tRNA synthetase [Escherichia coli KTE80]
gi|431185221|gb|ELE84951.1| cysteinyl-tRNA synthetase [Escherichia coli KTE83]
gi|431204781|gb|ELF03339.1| cysteinyl-tRNA synthetase [Escherichia coli KTE116]
gi|431342571|gb|ELG29550.1| cysteinyl-tRNA synthetase [Escherichia coli KTE78]
gi|431345962|gb|ELG32876.1| cysteinyl-tRNA synthetase [Escherichia coli KTE79]
gi|431420081|gb|ELH02415.1| cysteinyl-tRNA synthetase [Escherichia coli KTE158]
gi|431447286|gb|ELH28028.1| cysteinyl-tRNA synthetase [Escherichia coli KTE190]
gi|431537058|gb|ELI13207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE105]
gi|431575791|gb|ELI48517.1| cysteinyl-tRNA synthetase [Escherichia coli KTE122]
gi|431590975|gb|ELI61978.1| cysteinyl-tRNA synthetase [Escherichia coli KTE128]
gi|431681896|gb|ELJ47668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE177]
gi|431710199|gb|ELJ74628.1| cysteinyl-tRNA synthetase [Escherichia coli KTE82]
Length = 461
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGPGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++P AR F M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEAR---------------FIEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + ++ LRK+ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKAEDMAAAN-AMASHLRKLSS-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R L G
Sbjct: 394 LEQEPEAFLQSGAQADDSEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|394989192|ref|ZP_10382026.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
gi|393791611|dbj|GAB71665.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
Length = 463
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/491 (45%), Positives = 287/491 (58%), Gaps = 32/491 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++++ K+ F PI GKV MYVCG+T YD HLGHAR V FD++ R+L +V
Sbjct: 2 LKIYNTLSRSKQDFIPIESGKVRMYVCGMTVYDYCHLGHARVMVVFDMINRWLRADGFDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII+RA + E +L+ R+ D L P ++PR + ++ +
Sbjct: 62 TYVRNITDIDDKIIKRAAENHEPIDALTGRFIAAMDEDATKLGVEKPEHEPRATQYVPGM 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +++N AYV GDV ++V K P YG+LSG+ L++ RAGERV V K +P DF
Sbjct: 122 IAMIQALMDNGLAYVARSGDVCYSVHKFPGYGKLSGKSLDDLRAGERVDVAVGKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK+AK GEP WDSPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKSAKPGEPQWDSPWGQGRPGWHIECSVMSDALLGEHFDIHGGGADLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +V+YW+HNG V +NEKMSKSLGNFFTIR++ ERY +R F++ AHYRSP
Sbjct: 242 SEGTHGHQHVNYWIHNGFVRVDNEKMSKSLGNFFTIREVLERYDAEVVRFFILRAHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A A+ +Y L++ SP HG A D + F A M
Sbjct: 302 LNYSDQHLDDAKGALTRLYTALKNVPPHPSPLTPHG-------VAIDWHDPYAAAFKAAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ + F A N K KQ L LR + +LGL
Sbjct: 355 EDDFNTAEAVAVLFDLA--------NEANKTHDKQ----LASLLRTLGG-------VLGL 395
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L G SE LQ + T E + Q I R AA+K KD++ +D+IR +L +G+
Sbjct: 396 LQRGP-SEFLQ----GGAGESGCTPEQIEQRIAARIAAKKAKDYAAADRIRKELLDQGVV 450
Query: 498 LMDMGKETIWR 508
L D + T+WR
Sbjct: 451 LEDTPQGTVWR 461
>gi|429083804|ref|ZP_19146830.1| Cysteinyl-tRNA synthetase [Cronobacter condimenti 1330]
gi|426547158|emb|CCJ72871.1| Cysteinyl-tRNA synthetase [Cronobacter condimenti 1330]
Length = 461
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 283/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L ++
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPESEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G + PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDSEAAPAGGEAFET---RFVEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + L LRK+ +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKAEDSSAAN-QLAAHLRKLAA-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI +R ARK KD++ +D R LT G
Sbjct: 394 LEQEPEQFLQSGAQANDDEVAEIE-------ALIVKRLEARKAKDWAAADAARDRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|321313765|ref|YP_004206052.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|418034772|ref|ZP_12673241.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|320020039|gb|ADV95025.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|351468426|gb|EHA28646.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SC-8]
Length = 466
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 282/497 (56%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++S R+ + Y D++ L C PRV ++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVSALGCRKADLHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + + Q++ AY EGDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ A + A S Q H + N +D + + R
Sbjct: 301 PINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F D K N L K + IE +I
Sbjct: 353 AFEEAMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI------- 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +LG +L EL ++++ LIE+R AR+N+DF+ SDQIR L
Sbjct: 403 VSVLGF----------------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMNIILEDTAQGTRWK 463
>gi|358066738|ref|ZP_09153228.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
gi|356695009|gb|EHI56660.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
Length = 469
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/498 (40%), Positives = 295/498 (59%), Gaps = 35/498 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++I+N+ T++KE F P+ GKV MYVCG T Y+L H+G+AR + FD + RY + +V
Sbjct: 1 MRIFNTFTRKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIFFDTVRRYFIYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII RA + G + +S RY E DMAD+ +P T P + ++ +
Sbjct: 61 NYVSNFTDVDDKIINRAKEEGVESIVISTRYIAECKKDMADMNIMPATKHPLATQEIDGM 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
+DMI +I AYV +G V+F VE +YGRLS + ++ ++G R V + K++P
Sbjct: 121 EDMIKTLIEKKHAYVAKDGTVYFDVESFKDYGRLSNKNIDELQSGFRELQVTGEESKKSP 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
ADF LWK K GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENE
Sbjct: 181 ADFVLWKPKKEGEPYWDSPWSKGRPGWHIECSVMSRKYLGVQIDIHGGGEDLIFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS ++ ++WMHN + +N+KMSKSLGNFFT+RQI E+Y ALR F++SAHY
Sbjct: 241 IAQSESSSGMKFANFWMHNAFLNIDNKKMSKSLGNFFTVRQIGEKYDLQALRFFMLSAHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKLRDEF 373
R+PLN+S+ ++S+ +A+ I +++ + L Q A + D + KL+++F
Sbjct: 301 RNPLNFSMDLMESSKNALDRIITSVERLDEFL--LQSSRDAADDMEKQNLDRLLKLKNKF 358
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M DD NT+ ++ F+ ++ NS+ + K E + + + +
Sbjct: 359 EVFMDDDFNTADAISTVFE-IVRLANSTADENSSK----------EYINALHEAIDTLCN 407
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELT-EEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LG++ KR +L+ +E+V LIE+R ARKNKD+ ++D+IR L
Sbjct: 408 VLGIIT----------------KRKQLSIDEEVEALIEKRQEARKNKDYKQADEIRNRLL 451
Query: 493 RKGIALMDMGKETIWRPC 510
GI L D + W+
Sbjct: 452 SMGIVLEDTREGVKWKKA 469
>gi|315127193|ref|YP_004069196.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
gi|315015707|gb|ADT69045.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
Length = 459
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/494 (42%), Positives = 282/494 (57%), Gaps = 42/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F P+V GK+ MYVCG+T YD H+GHAR V FD++ RYL HL ++
Sbjct: 2 VQIYNTLTRQKEEFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RAN+ GE L+ R + D L L P +P V+ HM++I
Sbjct: 62 KYVRNITDVDDKIIKRANENGEAINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTGHMDEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I AYV +GDV F V YG LS Q L ++G RV V K +P DF
Sbjct: 122 IAMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V N EKMSKSL NFFT+R++ ++Y ++R+FLIS HYRS
Sbjct: 242 SCCANNGQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS LD A ++ IY L+ E + + A+ F M
Sbjct: 302 LNYSQENLDQARSSLERIYTALRGVEPVECELEGNEYVAK---------------FRKAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRILG 436
+DD N+ L F+ + LN +K K L+ I ++ + ILG
Sbjct: 347 NDDFNSPEALPVVFE-----VAKELNRVKDSDSEKAGHLAFI---------LRSLGEILG 392
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+ QQ + L+ + +E ++ LI +R AR +K+++ +D+ R L
Sbjct: 393 ---------IAQQAPEAFLQGGQNDDEVAEIEALIVKRNDARASKNWAAADEARDALNAL 443
Query: 495 GIALMDMGKETIWR 508
G+ L D +T WR
Sbjct: 444 GVVLEDSAGKTTWR 457
>gi|90580099|ref|ZP_01235907.1| cysteinyl-tRNA synthetase [Photobacterium angustum S14]
gi|90438984|gb|EAS64167.1| cysteinyl-tRNA synthetase [Photobacterium angustum S14]
Length = 460
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 287/493 (58%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE FTPI PGKVGMYVCGVT YDL H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AYV GDV F V K +YGRLS Q L+ +AG RV +D KR+P DF
Sbjct: 122 IALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ + ++ E+ + + F M
Sbjct: 302 LNYSEDNLKQARSALERLYTSLRGLDTSVEA-----------AGGEEFVTR----FKEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + ++E+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKTDD--------VATASALGARMRELADVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ L+ A + + E + LI++R AR KD++ +D+ R L G
Sbjct: 394 LSQEPEAF------LQGGAGEDDNVAE--IEALIQQRLDARAAKDWAAADEARDKLLAMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IILEDGAQGTTWR 458
>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 472
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 301/491 (61%), Gaps = 24/491 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N++T++KE F P+ V MYVCG T YD +H+GHAR+A+ FD++ R+ E+ V
Sbjct: 2 IRVFNTLTEKKEEFKPLNDKTVKMYVCGPTVYDHAHIGHARSAIVFDVIRRWFEYRGYRV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN+TDVDDKII+R+ + G ++ +Y + Y DM L PTY+P+V++H+E+I
Sbjct: 62 IYVRNYTDVDDKIIKRSKEEGIPWYEVAKKYIESYEEDMKALNIKEPTYKPKVTEHIEEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+MI +I AY EGDV+F+VEK YG+LS ++ E AG R+ +K+NP DFA
Sbjct: 122 IEMIKGLIAKGYAYESEGDVYFSVEKFSEYGKLSKRKTEELIAGARIEPGEKKKNPLDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK +K GEP W+SPWG GRPGWHIECSAM+ YL DIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKKSKEGEPGWESPWGIGRPGWHIECSAMAMKYLGRTMDIHGGGLDLIFPHHENEIAQS 241
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A S V YW+HNG V N EKMSKSLGNFFTI+ I + + LR FL+S HYRSP+
Sbjct: 242 EAYTGKSFVRYWLHNGFVMVNKEKMSKSLGNFFTIKDILKEFSSDVLRLFLLSTHYRSPI 301
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S +L A + + ++ E+ E T N D N + +F + M
Sbjct: 302 DFSFERLKDAERSFGRLLNFIESKEII-----EKLPTFEKNSEIFDVEN-YKLQFESAMD 355
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ L F+ + N++K K K+ ++S E + +L+ +G++
Sbjct: 356 DDFNTARALGVIFE-----LVKEANLIKDKAIKENKIS--------NKEKETILKAIGIV 402
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIA 497
+Y ++L +K K+ E E+++++ LI+ R+ RK K F +D+IR L GI
Sbjct: 403 E--SYLKLLGFKLEK--KKQEGIEDELIKLLIDVRSELRKRKAFDLADKIRDGLKDLGII 458
Query: 498 LMDMGKETIWR 508
L D+ TI++
Sbjct: 459 LEDLPSGTIYK 469
>gi|365840758|ref|ZP_09381935.1| cysteine--tRNA ligase [Anaeroglobus geminatus F0357]
gi|364560501|gb|EHM38435.1| cysteine--tRNA ligase [Anaeroglobus geminatus F0357]
Length = 481
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/494 (42%), Positives = 293/494 (59%), Gaps = 21/494 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KELF P+ PG+V MYVCG+T Y+ SH+G+AR V++D++ RYL+HL +V
Sbjct: 4 LTVYNTLTRKKELFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYQV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN +++NRY Y M L+ PRVS+HM+ I
Sbjct: 64 THIQNFTDVDDKIINAANGEDAAWDTVANRYIASYFEVMDKLRVQRADRYPRVSEHMDDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +++ AY ++GD+++ V NYG LS + L++ AG R+ VD RK NP DFA
Sbjct: 124 ISMIGELVKKGHAYELDGDIYYRVRSFENYGELSHRSLDDMMAGARIEVDDRKENPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK+AK GEP+WDSPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQ+
Sbjct: 184 LWKSAKPGEPAWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDLIFPHHENEIAQT 243
Query: 259 CAAC-QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A C V+YW+HNG +T ++EKMSKSL NFF ++ + E Y ALR+FLIS HYRSP
Sbjct: 244 EACCGHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLEHYSADALRYFLISNHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAEDCINKLRDEFH 374
L++S +L + ++ + + + L G A +N A K ++F
Sbjct: 304 LDFSDERLTEMTRSLERLGTAIDNTLYLLDLPSGSGSAASAQLLNDA-----RKAMEDFE 358
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT+ F+ A K LN+ K + L ++++ K + I
Sbjct: 359 EAMCDDFNTALASAAMFELAKK-----LNIYKNEVVTDDVPVDASVLAEVKHIFKTMTDI 413
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LG+L ++ V DK AEL + ++E R R K ++ +D IR L+
Sbjct: 414 LGILED-RWNGVRGGTGDK--DYAELMD----VILELRQECRAQKQYALADAIRDKLSEL 466
Query: 495 GIALMDMGKETIWR 508
GI + D + W+
Sbjct: 467 GITIEDSPQGARWK 480
>gi|443470479|ref|ZP_21060579.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|443473065|ref|ZP_21063090.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442900156|gb|ELS26408.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442903628|gb|ELS28919.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
Length = 462
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/495 (42%), Positives = 281/495 (56%), Gaps = 40/495 (8%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++T+ KE F P+ V MYVCG+T YD H+GHAR V+FD++ R+L
Sbjct: 2 MALSIYNTLTKAKEAFQPLEGNSVRMYVCGMTVYDYCHIGHARVMVAFDVVTRWLRERGY 61
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA + GE L +R D A L L P +PR + H+
Sbjct: 62 DVTYVRNITDIDDKIIRRAQENGEPFEVLVDRMIAAMHEDEARLSVLRPDIEPRATGHIA 121
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ +MI +I+ AY GDV++ V + YG+LS +R++ + G R+ VD K +P
Sbjct: 122 GMHEMIQTLIDKGFAYAPGNGDVYYRVGRFEGYGKLSRRRIDELKIGARIEVDESKEDPL 181
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSW+SPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 182 DFVLWKGAKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 241
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 242 AQSEAATGKLYAKAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 301
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ A++P AR F A
Sbjct: 302 SPINYSEESLKEAKGALERFYNGLKGLP-AVAPAGGEAFVAR---------------FGA 345
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N+ F+ + +N L++ ++ + ++K + +L
Sbjct: 346 AMDDDFNSPEACAVLFE-----MIREVNRLREVD--------VQVAAGLAAQLKSMAAVL 392
Query: 436 GLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
G+L P A+ L+ A + + E D L I+ R AAR K++++SD+IR LT
Sbjct: 393 GVLQLEPDAF------LQAGAAGKVDAAEVDAL--IQARLAARAEKNWAESDRIRDRLTA 444
Query: 494 KGIALMDMGKETIWR 508
G+ L D T WR
Sbjct: 445 MGVVLEDGKGGTTWR 459
>gi|387772152|ref|ZP_10128111.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
gi|386907797|gb|EIJ72499.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
Length = 459
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 285/493 (57%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ ++KE F PI P +VGMYVCGVT YDL H GH R VSFD++ RYL + +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E L +R E D L L P +PR + H+ +I
Sbjct: 62 HYVRNITDVDDKIIKRAIENNETCDQLVDRMIAEMHKDFDALNILRPDVEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ ++I N AYV +GDV F VE P YG LS Q L+ +AG RV + S K+NP DF
Sbjct: 122 IAMVEKLIANGHAYVAADGDVMFDVESFPKYGALSRQNLDQLQAGARVEIKSVKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWESPWGKGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H G +T + EKMSKSLGNFF+IR + + Y +LR+F ++AHYRS
Sbjct: 242 SCCAHHGDYVNYWLHTGMLTIDREKMSKSLGNFFSIRYMLDLYDAESLRYFFLTAHYRSL 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS+ L+ A A+ +Y L+ C++ + PA + + F M
Sbjct: 302 LDYSIDNLNLARSALERLYTALRGCDLTV-------------PAKGG--EQYVEAFKIAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT L F+ I +N LK + E+ + +KE+ +LGL
Sbjct: 347 DDDFNTPGALAVLFE-----IAREVNKLKTEDA--------ETANGLAVCLKELAGVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L+Q + LK +E ++ LI++R A+ K+++ +D++R L
Sbjct: 394 ---------LEQDPETFLKGGANDDEAAEIEALIKQRNEAKAAKNWAIADEVRDKLKAMN 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDTPNGTTWR 457
>gi|326391118|ref|ZP_08212664.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325992817|gb|EGD51263.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 466
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 286/493 (58%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++++ KE P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ +V
Sbjct: 1 MKLYNTLSRTKEELEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII+RA + ++ +Y EY D +L T P+ ++H+E I
Sbjct: 61 NYVQNFTDIDDKIIKRAQEENVTTKEVAEKYIDEYFKDADNLGIKRATVHPKATEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ AYVV G+V+F K +YG+LS + +E +AG R+ ++ K+NP DF
Sbjct: 121 IEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEEKKNPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG DL+FPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + YWMH G++ NNEKMSKS GNFFT+R+ITE+Y+P LR F++ AHYRSP+
Sbjct: 241 ETAYEQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVLRLFMLMAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-- 376
N+S+ ++ A+ A Y+ L + L K +N + + K +
Sbjct: 301 NFSLDLMEQANSA----YERLLNAVANLKHLANVCKDGGLNEEEKKLMEKFEEYKKEFEE 356
Query: 377 -MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ A K N++L+ K+ + L + L + +L
Sbjct: 357 AMDDDFNTADAISVLFEMA-KTSNANLSRNSSKKLVEYILDMFLKLSE----------VL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL G EL +E++L LIEER ARK K++ +D+IR L KG
Sbjct: 406 GLSYRGV--------------ETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKG 451
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 452 IILEDTPEGVRWK 464
>gi|237756267|ref|ZP_04584825.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691568|gb|EEP60618.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 487
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/497 (41%), Positives = 299/497 (60%), Gaps = 17/497 (3%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++LKIYN++T +KE F PI PG+V +Y CGVT YD +H+GH R+ + FD++ RYL +L
Sbjct: 1 MSLKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V +VRNFTDVDDKII RA + +S+++ +EY D + P +PRV+ H+
Sbjct: 61 NVIFVRNFTDVDDKIINRAKNECLPFSVISDKFIKEYFDDAEKFRIEPADVEPRVTTHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I ++++ AY +GDV+F+V K YG+LS + ++ AG R+ +K++P D
Sbjct: 121 DIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPGEKKKDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AKAGEP W+SPWG GRPGWH EC AM +L DIHGGG+DL FPHHENEIA
Sbjct: 181 FALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
Q+ A YW+HNG VT N +KMSKSLGN+ T+++I +Y P LR ++S HYRS
Sbjct: 241 QAEALTGKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYSKYEPDILRLLVLSVHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRDEFHA 375
PL++S +++ A + +++ EV P +E+ + N + K + F++
Sbjct: 301 PLDFSWDKMEETKKAYERLKNAIEEAEVLNKLPIEENFEGDLYN-----AVQKAQSGFYS 355
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLR 433
MSDD NT L F + +N+L+ K K +S +ES ++ + ++ R
Sbjct: 356 AMSDDFNTPEALASLFG-----LVREMNILRDKAIKHGGISKKALESYKEAAKTLHDIGR 410
Query: 434 -ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADL 491
I GL + ++Q + KA ++ E ED++Q LIE R ARK+K F+ +D IR L
Sbjct: 411 DIFGLF--DSLQPCVKQEEIKAKEKEESINEDLIQVLIEAREKARKDKQFAIADLIRDKL 468
Query: 492 TRKGIALMDMGKETIWR 508
KGI L D T W+
Sbjct: 469 AEKGIILEDTPFGTKWK 485
>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 483
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/494 (39%), Positives = 293/494 (59%), Gaps = 34/494 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN+MT + E F I KV MYVCG T Y+ HLG+AR V FD L RY EH EV
Sbjct: 1 MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHKGMEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTDVDDKII ++ + G + +S +Y + + D++ L L +P+V+++M ++
Sbjct: 61 EFVQNFTDVDDKIINKSMEEGTSASEVSEKYIKYFFEDISKLNILESVKRPKVTENMSEV 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I ++I+N AY +GDV+F V+K +YG+LS Q++E G R+ V K+NP DFA
Sbjct: 121 IEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEIKKNPVDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK K GEP W+SPWG GRPGWHIECSAM+ YL FDIHGGG DL+FPHHENEIAQS
Sbjct: 181 LWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A + +YW+HNG + N +KMSKSLGNFF +R+I E++ +R F++S HYR P+
Sbjct: 241 KCAYHGNFANYWLHNGFIQINGDKMSKSLGNFFLLREILEKFSGNVIRLFILSTHYRKPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S ++ A+ I +++ E + ++ N I++ +F M+
Sbjct: 301 NFSFENMEDTKKALQNIIKSMNKFENIVEKYKNEKIENVKNSEFSQKIDEFDKKFEEAMA 360
Query: 379 DDLNTSHILTGAF---QDALKFINSSLNMLKKKQPKQQQLSLI--------ESLR-KIEN 426
+D+NT L F ++ KFI+++ + + S I +SL+ KIEN
Sbjct: 361 EDMNTPQALATIFDQIRETNKFISTN----------ESEFSTIYYEIKKSYDSLKAKIEN 410
Query: 427 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 486
+ G+ EV +K++ + ELT++ + LI+ R+ AR K+F SD+
Sbjct: 411 -------VFGIAI-----EVENAVKEEDGENMELTKKLIELLIKLRSEARSEKNFKLSDE 458
Query: 487 IRADLTRKGIALMD 500
IR +L G+ + D
Sbjct: 459 IRDELKVLGVEIKD 472
>gi|330445515|ref|ZP_08309167.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489706|dbj|GAA03664.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 460
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 285/494 (57%), Gaps = 41/494 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE FTPI PGKVGMYVCGVT YDL H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+VRN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AYV GDV F V K +YGRLS Q L+ +AG RV +++ KR+P DF
Sbjct: 122 IALCERLIERGFAYVASNGDVMFEVSKFEDYGRLSKQDLDQLQAGARVDIETAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ + ++ AR A M
Sbjct: 302 LNYSEENLKQARSALERLYTSLRGLDTSVEAAGGEEFVARFKEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + ++E+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKADD--------VAAASVLGARMRELADVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRK 494
L Q + L+ ++DV + LI++R AR KD++ +D+ R L
Sbjct: 394 ---------LSQEPETFLQGGAGEDDDVAEIEALIQQRLDARAAKDWAAADEARDKLMAM 444
Query: 495 GIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 445 GIILEDGAQGTTWR 458
>gi|167758881|ref|ZP_02431008.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
gi|167663621|gb|EDS07751.1| cysteine--tRNA ligase [Clostridium scindens ATCC 35704]
Length = 468
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/495 (40%), Positives = 281/495 (56%), Gaps = 30/495 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++++QKE F P+ GKV MYVCG T Y+ H+G+AR + FD + RY E+ +V
Sbjct: 1 MKLYNTLSKQKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII+RA + G + +S RY E DM + P T P ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKRAIEEGVSSDEISKRYIAECKKDMDGMNIKPATKNPMATEEICGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
DMI +I+ AY G V++ K YG+LS + L++ R+GER V + K +P
Sbjct: 121 VDMIQTLIDKGYAYEKNGTVYYRTRKFEEYGKLSHKNLDDLRSGERSLLVTGEDEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEP+W+SPW GRPGWHIECS MS YL + DIH GG DL+FPHHENEI
Sbjct: 181 DFVLWKPKKEGEPAWESPWSDGRPGWHIECSEMSKKYLGEQIDIHAGGEDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHN + +N KMSKSLGNF T+R+I+++Y LR F++SAHYR
Sbjct: 241 AQSEAANGKEFAKYWMHNAFLNIDNRKMSKSLGNFRTVREISQQYDLQILRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLN+S ++++ + I + + L + T A ++ EF
Sbjct: 301 SPLNFSADLMEASKSGLERIVNAADNLKFLLGNAKSESMTQEEEAAFAKTAEYVQ-EFER 359
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ + F D +K+IN++ + K K+ Q L+ L +L
Sbjct: 360 AMDDDFNTADAIASVF-DLVKYINTTADADKSKEFLQNLFDLLVKLTD----------VL 408
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL+ K+ E+ ED+ ++IEER AARK KDF+++D IR +L KG
Sbjct: 409 GLIVD---------------KKEEMLAEDIEKMIEERQAARKAKDFARADAIRDELLAKG 453
Query: 496 IALMDMGKETIWRPC 510
I L D + W+
Sbjct: 454 IVLEDTREGVKWKKA 468
>gi|297545336|ref|YP_003677638.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843111|gb|ADH61627.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 466
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 286/493 (58%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++++ KE F P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ +V
Sbjct: 1 MKLYNTLSRTKEEFQPLNDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII+RA + L+ +Y EY D +L T P+ ++H+E I
Sbjct: 61 NYVQNFTDIDDKIIKRAQEENVTTKELAEKYIHEYFKDADNLGIKRATVHPKATEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I +I+ AYVV G+V+F K +YG+LS + +E +AG R+ ++ K+NP DF
Sbjct: 121 VKFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEEKKNPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMH G++ NNEKMSKS GNFFT+R+ITE+YHP LR F++ AHYR+P+
Sbjct: 241 EALYGQQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYHPEVLRLFMLMAHYRNPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-- 376
N+S+ +D A+ A Y+ L + L K +N + + K +
Sbjct: 301 NFSLDLMDQANSA----YERLLNAMANLKHLLTVCKERELNEEEKRIVEKFEEYKKEFEE 356
Query: 377 -MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ A K N +L+ K+ + L + L + IL
Sbjct: 357 AMDDDFNTADAISVLFEMA-KTANINLSGNSSKELVKYILDMFLKLSE----------IL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL Y V + ++ +E++L LIE+R ARK K++ +D+IR L KG
Sbjct: 406 GLF----YRTV----------KTDIDDEEILALIEKRQQARKEKNWKLADEIRDRLREKG 451
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 452 IILEDTPEGVRWK 464
>gi|289579166|ref|YP_003477793.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
gi|289528879|gb|ADD03231.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
Length = 466
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 286/493 (58%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++++ KE F P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ +V
Sbjct: 1 MKLYNTLSRTKEEFQPLNDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII+RA + L+ +Y EY D +L T P+ ++H+E I
Sbjct: 61 NYVQNFTDIDDKIIKRAQEENVTTKELAEKYIHEYFKDADNLGIKRATVHPKATEHIEDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ I +I+ AYVV G+V+F K YG+LS + +E +AG R+ ++ K+NP DF
Sbjct: 121 IEFIKILIDKGYAYVVNGNVYFETAKFKGYGKLSHKNIEELQAGARIEINEEKKNPLDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMH G++ NNEKMSKS GNFFT+R+ITE+YHP LR F++ AHYR+P+
Sbjct: 241 EALYGQQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYHPEVLRLFMLIAHYRNPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-- 376
N+S+ +D A+ A Y+ L + L K +N + + K +
Sbjct: 301 NFSLDLMDQANSA----YERLLNAVANLKHLFTVCKERELNEEEKRIVEKFEEYKKEFEE 356
Query: 377 -MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ ++ F+ A K N +L+ K+ + L + L + IL
Sbjct: 357 AMDDDFNTADAISVLFEMA-KTANINLSGNSSKELVKYILDMFLKLSE----------IL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL Y V + ++ +E++L LIE+R ARK K++ +D+IR L KG
Sbjct: 406 GLF----YRSV----------KTDIDDEEILALIEKRQQARKEKNWKLADEIRDRLREKG 451
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 452 IILEDTPEGVRWK 464
>gi|311070741|ref|YP_003975664.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|419823194|ref|ZP_14346754.1| cysteinyl-tRNA ligase [Bacillus atrophaeus C89]
gi|310871258|gb|ADP34733.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|388472725|gb|EIM09488.1| cysteinyl-tRNA ligase [Bacillus atrophaeus C89]
Length = 466
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/497 (41%), Positives = 286/497 (57%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR A++LGE+ ++S R+ + Y D+ L C PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIRAADELGEDVPTISERFIKAYFEDVGALGCKKADLHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D + ++I AY +GDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIDFVQELIKKGYAYESDGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWD+PWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKDGEISWDAPWGKGRPGWHIECSAMVKKYLGEQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKKHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ +A + A S H + N A+D I + R
Sbjct: 301 PINYSEELLENTKNA-------FNRLKTAYSNLL-HRLNSSTNLTADDDEWLKKIEEHRT 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F+ A K N L + + + IE +I +
Sbjct: 353 AFEEAMDDDFNTANAISILFELA-KHANYYLQ--EDNTADKVINAFIEMFDRIAS----- 404
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGL + EL ++DV +LIE+R AR+N+DF+ SDQIR L
Sbjct: 405 --VLGL----------------TMGEQELLDQDVEELIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMNIILEDTAQGTRWK 463
>gi|375006897|ref|YP_004980527.1| cysteinyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236395|ref|YP_007400453.1| cysteinyl-tRNA synthetase [Geobacillus sp. GHH01]
gi|359285743|gb|AEV17427.1| Cysteinyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205237|gb|AGE20702.1| cysteinyl-tRNA synthetase [Geobacillus sp. GHH01]
Length = 466
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/496 (41%), Positives = 289/496 (58%), Gaps = 39/496 (7%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
++++YN++T++KE F P+ P KV MYVCG T Y+ H+G+ARAA+ FD + RYLE +
Sbjct: 3 SIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYV NFTDVDDK+I+ A +LGE+ +++ R+ + Y D+ L C PRV+++++
Sbjct: 63 VTYVSNFTDVDDKLIKAARELGESVPAIAERFIEAYFEDIQALGCKKADIHPRVTENIDT 122
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I + I +I+ AY V+GDV++ K YG+LS Q ++ +AG R+ + +K +P DF
Sbjct: 123 IIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIGEKKDDPLDF 182
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQ
Sbjct: 183 ALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQ 242
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A YW+HNG++ NNEKMSKSLGNF + I P LR F++S HYR P
Sbjct: 243 SEALTGKPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDIIREIDPQVLRFFMLSVHYRHP 302
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDE 372
+NYS L+SA + L+ + A Q H A N D I +R
Sbjct: 303 INYSEELLESAR-------RGLERLKTAYGNLQ-HRLQASTNLTDNDEEWVSRIADIRAS 354
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT++ + F+ A K N L Q K +I + + E +++
Sbjct: 355 FIREMDDDFNTANGIAVLFELA-KQANLYL------QEKTTSEKVIHAFLR---EFEQLA 404
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGL LK+ EL +E++ LI++R ARKN+DF+ +D+IR +L
Sbjct: 405 DVLGL----------------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRDELR 448
Query: 493 RKGIALMDMGKETIWR 508
K I L D + T W+
Sbjct: 449 AKNIILEDTPQGTRWK 464
>gi|170760749|ref|YP_001788843.1| cysteinyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
Maree]
gi|229558627|sp|B1KTA5.1|SYC_CLOBM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169407738|gb|ACA56149.1| cysteine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
Length = 465
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/491 (39%), Positives = 294/491 (59%), Gaps = 29/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +VPG+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGSRINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKNQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F D ++ +N+++ + K+ + L LI +E+ LG+
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGNPLGI 407
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + ++++ +R + ARK K+++ +D+IR DL +GI
Sbjct: 408 LQESTKASLEEEIEKLIEERQK---------------ARKEKNWALADKIRDDLKERGIV 452
Query: 498 LMDMGKETIWR 508
L D + W+
Sbjct: 453 LEDTPQGVRWK 463
>gi|421843582|ref|ZP_16276742.1| cysteinyl-tRNA synthetase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411775303|gb|EKS58749.1| cysteinyl-tRNA synthetase [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 461
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q++ AYV + GDV F V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLMAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + +++P AR F M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEAR---------------FIEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + LRK+ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKGEDMAAAN-GMAAHLRKLSS-------VLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R L G
Sbjct: 394 LEQDPEAFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|269837621|ref|YP_003319849.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269786884|gb|ACZ39027.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 468
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/496 (43%), Positives = 287/496 (57%), Gaps = 34/496 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL++ ++ T ++ F PI PG V MYVCG T YD +H+GHA +A+ FD+L RYLE+
Sbjct: 1 MTLRLTDTRTGEQRPFEPIEPGVVRMYVCGPTVYDDAHIGHAMSAIVFDVLRRYLEYSGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V + +NFTDVDDKII+RA LG P L+ R +++L D A L P T PR + ++
Sbjct: 61 RVIHAQNFTDVDDKIIQRAATLGIEPRELAERLIEDWLRDTARLNVKPATIYPRATQEID 120
Query: 137 QIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
I +MI +I AY VEG DVFF V+ P YG+LS + L+ AG R+ VD RK NP
Sbjct: 121 TIIEMIKGLIAEGHAYAVEGGDVFFRVDSFPGYGKLSHRSLDEMMAGARIEVDPRKENPM 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWK AK GEP+WDSPWGPGRPGWHIECSAM +L + DIHGGG DLIFPHHENEI
Sbjct: 181 DFALWKGAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGDRIDIHGGGADLIFPHHENEI 240
Query: 256 AQSCAAC-QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
AQS A Q+ +W+HNG + EKMSKSLGN TIR++ ER A R ++S+HY
Sbjct: 241 AQSEAFTDQEPLARFWVHNGLLQLGGEKMSKSLGNLITIRELLERGDGEAFRFLVLSSHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ--EHGKTARINPAAEDCINKLRDE 372
RSPL +S +DSA + + ++ + A +P +H ARI ++ R E
Sbjct: 301 RSPLTFSDEAMDSARRGLARLQSAVRGFDPATAPATAPDHA-LARIA-------DETRAE 352
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F A M DDLNT L+ F+ A + IN + S++ KE+
Sbjct: 353 FRAAMDDDLNTPVALSHLFELA-RAINRERDAGAPAAAVAYAQSVL----------KELA 401
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
+LGL E Q D+A+ E V L+E RA RK + + +D+IR L
Sbjct: 402 GVLGLT-----LETTTQRTDEAI------EPFVDLLLEVRAELRKQRLWDLADRIRVRLG 450
Query: 493 RKGIALMDMGKETIWR 508
GI + D + + WR
Sbjct: 451 ELGIRVEDTAQGSTWR 466
>gi|17228587|ref|NP_485135.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|21264005|sp|Q8YXW5.1|SYC_NOSS1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|17130438|dbj|BAB73049.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 486
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/504 (42%), Positives = 300/504 (59%), Gaps = 34/504 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL IYN++T+++E + PGKV MY CGVT YD HLGHAR+ + +D + RYL
Sbjct: 1 MTLTIYNTLTRRQEPLETVEPGKVKMYCCGVTVYDYCHLGHARSYIVWDTIRRYLIWRGF 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
V Y++NFTD+DDKI+ RA + G +SNR+ Y D+ L L PRV++H+
Sbjct: 61 GVKYIQNFTDIDDKILNRAKEQGLTMAEVSNRFIDAYFADIRRLNVLDADEYPRVTEHIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS-----RK 191
+I +I + AY V GDV++ VE+ P+YG+LSG+ LE +AG VD+ +K
Sbjct: 121 EIHQLIQILEEKGLAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVDAEDSEPKK 180
Query: 192 RNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHH 251
++P DFALWKAAK GEP+WDSPWG GRPGWHIECSAM L + DIHGGG DLIFPHH
Sbjct: 181 QHPFDFALWKAAKPGEPAWDSPWGAGRPGWHIECSAMIRSKLGATIDIHGGGGDLIFPHH 240
Query: 252 ENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER--------YHPL 303
ENEIAQS AA YW HNG V N +KMSKSLGNF TIR++ + +P+
Sbjct: 241 ENEIAQSEAAMNQPLARYWTHNGMVMVNGQKMSKSLGNFITIRELLDGVGSWKEDPVNPM 300
Query: 304 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 363
A+R F++ AHYR PL+++ + +A ++ ++TL+ E L +Q K +A
Sbjct: 301 AVRLFVLQAHYRKPLDFTEEAIATAENS----WKTLK--EGLLFGYQYGEKLGWGQESA- 353
Query: 364 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 423
I +L F DD N S L F+ A K + N+L + + + + L++
Sbjct: 354 -IIPELATRFQELGDDDFNFSGGLAVLFELA-KELRREGNILVHEGTTK---TPSDELQR 408
Query: 424 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 483
N + + +ILGL +L D+ +A L++ D+ LIE+R AARKNK+FS+
Sbjct: 409 QWNTLVTLAKILGLEA---------KLDDETQTQAGLSDTDIEALIEQRQAARKNKNFSE 459
Query: 484 SDQIRADLTRKGIALMDMGKETIW 507
SD+IR +L +G+ L+D + T W
Sbjct: 460 SDRIRNELQAQGVTLIDSPQGTRW 483
>gi|428277509|ref|YP_005559244.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|430755604|ref|YP_007211165.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Bacillus
subtilis subsp. subtilis str. BSP1]
gi|291482466|dbj|BAI83541.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|430020124|gb|AGA20730.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Bacillus
subtilis subsp. subtilis str. BSP1]
Length = 466
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 281/497 (56%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + + Q++ AY EGDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ A + A S Q H + N +D + + R
Sbjct: 301 PINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F D K N L K + IE +I
Sbjct: 353 AFEEAMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI------- 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +LG +L EL ++++ LIE+R AR+N+DF+ SDQIR L
Sbjct: 403 VSVLGF----------------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMNIILEDTAQGTRWK 463
>gi|295096713|emb|CBK85803.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 465
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 286/493 (58%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 6 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 66 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 125
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 126 IDITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 246 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++ PAA + R F M
Sbjct: 306 LNYSEENLKQARAALERLYTALRGTDKSV-------------PAAGGEAFEAR--FVEVM 350
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 351 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 397
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI+ R AR+ KD++ +D R LT G
Sbjct: 398 LEQEPDLFLQSGAQADDGEVAEIE-------ALIKARLEARQAKDWAAADAARNRLTEMG 450
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 451 IILEDGPQGTTWR 463
>gi|313887550|ref|ZP_07821233.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846428|gb|EFR33806.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 465
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/494 (40%), Positives = 291/494 (58%), Gaps = 35/494 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE F PI G+VG+Y CG T Y+ H+G+AR V FD L RY ++ +V
Sbjct: 1 MKLYNTLTRKKEDFVPIKEGEVGIYNCGPTVYNFIHVGNARPLVVFDTLRRYFDYKGMKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQ 137
+V NFTD+DDK+I +AND G ++ RY +E+ D L T PR ++H+++
Sbjct: 61 KFVVNFTDIDDKMINKANDEGVKVSDIAERYIKEFKKDAGGLHLYDYETINPRATEHIDE 120
Query: 138 IKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
I D I +I+ AYV GDV+F + + +YG+LS + LE+ +G RV V+ K+NP DF
Sbjct: 121 IIDFIQTLIDKGAAYVSNGDVYFDISHAKDYGKLSKKNLEDLISGHRVDVNDNKKNPQDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK K GEP W +PWG GRPGWHIECS M+ + DIH GG DL FPHHENEIAQ
Sbjct: 181 ALWKNKKEGEPYWQAPWGEGRPGWHIECSVMAKTIIGDNIDIHTGGEDLQFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S +YW+HNG +T +NEKMSKS GNFFT+R+I+E + LR FL++ YRSP
Sbjct: 241 SETCNGVPFANYWLHNGMITVDNEKMSKSKGNFFTVREISEEFDLEVLRFFLLTTQYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI---NKLRDEFH 374
+N+S ++ ++ +Y E A+ E ++ E+ + +K ++F
Sbjct: 301 INFSREVMEQTKNSSKRLYNAKYKLEDAI----EKTSVEKMTEEEENLLKGYDKHIEKFE 356
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DDLNT+ +T F D +K IN +L+ K+ ++ L L++ L K +
Sbjct: 357 KAMEDDLNTADAITAIF-DLVKDINLNLDENSSKEVLEKSLELLKKLTK----------V 405
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LG++ +R E++ D+ +LI+ER ARKNKDF+++D+IR +L
Sbjct: 406 LGIMEE---------------EREEIS-GDIEELIKERNEARKNKDFTRADEIRDELKNM 449
Query: 495 GIALMDMGKETIWR 508
GI + D T W+
Sbjct: 450 GIEIEDTRSGTTWK 463
>gi|260582005|ref|ZP_05849800.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
gi|260094895|gb|EEW78788.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
Length = 459
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/493 (43%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T++KE+F PI KVGMYVCGVT YDL H+GH R V FD++ RYL L ++
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L +R QE D L L P ++PR + H+ +I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ ++I AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF
Sbjct: 122 IEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS
Sbjct: 242 SCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L+ A A+ +Y L+ + + F E+ + R+ M
Sbjct: 302 LNYSEENLNLAQGALERLYTALRGADQSAVAF-----------GGENFVETFREA----M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + L+ F+ A +N LK + +E + ++E+ ILGL
Sbjct: 347 DDDFNTPNALSVLFEMA-----REINKLKAED--------VEKANGLAARLRELGAILGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
LQQ +K L+ +E + LI++R AR KD++ +D R +LT G
Sbjct: 394 ---------LQQEPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMG 444
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 445 IVLEDGANGTTWR 457
>gi|416510386|ref|ZP_11736984.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416520758|ref|ZP_11740383.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416557371|ref|ZP_11759500.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363549055|gb|EHL33412.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363554086|gb|EHL38325.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363578885|gb|EHL62687.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
Length = 461
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GEN ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGENFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + + +P AR A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKGEDMTAAN-AMASHLRKISG-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R LT G
Sbjct: 394 LEQEPDVFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|387819784|ref|YP_005680131.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
gi|322807828|emb|CBZ05403.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
Length = 465
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/491 (39%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +VPG+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT RQI E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTARQILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F D ++ +N+++ + K+ + L LI +E+ LG+
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKEIVKYTLDLI----------RELGSPLGI 407
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + ++++ +R + ARK K+++ +D+IR +L +GI
Sbjct: 408 LQESTKASLEEEIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIV 452
Query: 498 LMDMGKETIWR 508
L D + W+
Sbjct: 453 LEDTPQGVRWK 463
>gi|387894410|ref|YP_006324707.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
gi|387159469|gb|AFJ54668.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
Length = 460
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/491 (42%), Positives = 281/491 (57%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L IYN++++ KE+F P+ KV MYVCG+T YD H+GH R+ V+FDL+ R+L ++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TD+DDKII RAN+ GE+ +L+ R D A L L P +PR +DH+ +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I+ AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF
Sbjct: 122 HAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GEPSW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA + + WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS
Sbjct: 242 SEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSA 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS L A A+ Y L+ A++P AR F M
Sbjct: 302 INYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVM 345
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD T F+ + +N L++ I++ + +KE+ +LG+
Sbjct: 346 NDDFGTPEACAVLFE-----MVREINRLRETD--------IDAAAGLAARLKELASVLGV 392
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E L+ A R + E D LI+ R AAR NKD+++SD+IR LT G+
Sbjct: 393 LQ----MEADDFLQAGAEGRVDAAEVDA--LIQARLAARSNKDWAESDRIRDQLTAMGVV 446
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 447 LEDGKGGTTWR 457
>gi|393762614|ref|ZP_10351241.1| cysteinyl-tRNA ligase [Alishewanella agri BL06]
gi|392606849|gb|EIW89733.1| cysteinyl-tRNA ligase [Alishewanella agri BL06]
Length = 459
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/496 (44%), Positives = 296/496 (59%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++QKE+FTPI PGKVG+YVCG+T YD H+GHAR V+FD++ RYL +V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE+ +L+ R+ Q D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFKALGLLPADIEPTVTGHMQEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q+++ AY+ +GDV F V K YG LS Q LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYDAYGELSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAMSA +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ W+H G V + EKMSKSLGNFFT++++ +Y+ A+R+FL+S+ YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L+D I PA + D N F A
Sbjct: 302 LNYSKENLEQAHAALGRLYNALRD----------------ITPATQVDLNNDYVARFKAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F+ + +N K +P K +L+ + ++ + +L
Sbjct: 346 MDDDFNTPEALPVLFE-----LAREVNRFKTTEPAKAAELAAV---------LQTLAGVL 391
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
G+L A +A ++ ++++V Q LI +R AAR KD++ +D RA+LT
Sbjct: 392 GILQGDA----------EAFLKSGASDDEVGQIEALIAKRNAARAAKDWAAADAARAELT 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 ALGIVLEDKNGVTSWR 457
>gi|440288665|ref|YP_007341430.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI
57]
gi|440048187|gb|AGB79245.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI
57]
Length = 463
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 281/493 (56%), Gaps = 36/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YD H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDFCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ + L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVQLVDRMIVEMHKDFDALNILRPDAEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV E GDV F+V PNYG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITERLIERGHAYVAESGDVMFSVPTDPNYGKLSRQDLEQLQAGARVEVAEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGHHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ F + D F M
Sbjct: 302 LNYSEDNLKQARSALERLYTALRGTTTTDLEFVRSAQYV--------------DRFKEAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + D K +N++ K+ ++ + LR + +LGL
Sbjct: 348 DDDFNTP-VAYAVLFDLAKEVNNA----KQAGNSEEANAAATCLRTLAA-------VLGL 395
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R L G
Sbjct: 396 LEQDPEAFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 448
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 449 IVLEDGPQGTTWR 461
>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|416218561|ref|ZP_11624975.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|416234182|ref|ZP_11629731.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|416238906|ref|ZP_11631589.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|416243700|ref|ZP_11634035.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|416247920|ref|ZP_11636012.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|416255849|ref|ZP_11639418.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|421780418|ref|ZP_16216907.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BBH18]
gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|407812574|gb|EKF83359.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 480
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 293/493 (59%), Gaps = 28/493 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++Y++++ K F PI G++G+YVCG+T YD H+GHAR V FD++ R+L + +V
Sbjct: 11 LQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIGYQV 70
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA D GE L++R+ D L C P +PR ++H+E +
Sbjct: 71 NYVRNITDIDDKIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIENM 130
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPA 195
+ +I ++ + AY G DV++A+EK PNYG+LS + +++ +AG ERV+ KR+P
Sbjct: 131 QHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAEDKRHPF 190
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK EP W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEI
Sbjct: 191 DFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDLQFPHHENEI 250
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + ++WMH G + + EKMSKSLGNFFTIR++ +++HP +R FL+S+HYR
Sbjct: 251 AQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVDKFHPETIRFFLLSSHYR 310
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+N+S L + A+ IYQ+L+ E+ I P A + ++ F
Sbjct: 311 SPVNFSDTALKESHTALSRIYQSLKSA--------ENFGVISIMPNAWE--SEAGQAFAK 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT ++ F + IN ++ + Q Q+ S +++L + N
Sbjct: 361 AMNDDFNTPKAVSVLF-SVVTEINRAMKA-GEYQKATQEASTLKTLASVLN--------- 409
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+ + E LQ + K L++ ++ I +R A+ K+F+K+D IR +L R+G
Sbjct: 410 --IAQSSPHEFLQ--ANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQG 465
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 466 IELEDGRMGTTWR 478
>gi|295702329|ref|YP_003595404.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
gi|294799988|gb|ADF37054.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
Length = 465
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/494 (40%), Positives = 294/494 (59%), Gaps = 33/494 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +K+YN++T+QKE F P+ KV MYVCG T Y+ H+G+AR A+ FD + RYLE
Sbjct: 1 MAIKLYNTLTRQKETFVPLEENKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ A +LGE+ +++NR+ Y D + L C PRV+++M+
Sbjct: 61 DVEYVSNFTDVDDKLIKAAKELGEDVPTIANRFIDAYFEDTSALGCKHADVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++ + AY EGDV++ K YG+LS Q ++ ++G R+ V +K +P D
Sbjct: 121 IIIEFIDELVKKEYAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVGEKKEDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKA K GE +WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FTLWKATKDGEIAWDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A S YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKSFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKKHDPSLLRFFILSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFH 374
P+NY+ L++ ++ LQ L+ E T A+E + + +LR+ F
Sbjct: 301 PINYNEEILENTRKG----FERLQTAYGNLTHRLE-AATNLQEDASEWFEKLKELRETFV 355
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD NT++ ++ F+ A + ++L +L++ +IE+ K E KE+
Sbjct: 356 EEMDDDFNTANAISVLFELAKQ---ANLYLLEQTTST----DVIEAFIK---EFKELGTA 405
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
+G+ AEL +E++ QLI++R ARK+++F +DQIR +L K
Sbjct: 406 IGI----------------TFGEAELLDEEIDQLIQDRIQARKDRNFQLADQIRDELKAK 449
Query: 495 GIALMDMGKETIWR 508
I L D + T W+
Sbjct: 450 NIILEDTAQGTRWK 463
>gi|255282796|ref|ZP_05347351.1| cysteine--tRNA ligase [Bryantella formatexigens DSM 14469]
gi|255266570|gb|EET59775.1| cysteine--tRNA ligase [Marvinbryantia formatexigens DSM 14469]
Length = 469
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/496 (40%), Positives = 291/496 (58%), Gaps = 35/496 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN+++++KE F P+VPGKV MYVCG T Y+ H+G+AR + FD + RY+EH EV
Sbjct: 1 MKIYNTLSKKKEEFVPLVPGKVSMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEHKGYEV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V NFTDVDDKII++A + G +S RY E DM + P T P + ++ +
Sbjct: 61 NFVSNFTDVDDKIIKKAQEEGVTADEISQRYIAECKKDMEGMNVKPATTHPLATQEIDGM 120
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNP 194
+MI+ +I AY +G V+F K YG+LS + L++ R G R V+ + +K +P
Sbjct: 121 IEMISTLIEKGYAYPAADGTVYFRTRKFKEYGKLSHKNLDDLRGGNRSLLVSGEEQKEDP 180
Query: 195 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
DF LWK K GEP W+SPW GRPGWHIECS MS YL + DIH GG DLIFPHHENE
Sbjct: 181 LDFVLWKPKKEGEPYWESPWCQGRPGWHIECSVMSKKYLGEEIDIHAGGEDLIFPHHENE 240
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS YWMHNG + +N KMSKSLGNFFT+R+I+E+Y LR F++SAHY
Sbjct: 241 IAQSECCNGKIFARYWMHNGFLNIDNRKMSKSLGNFFTVREISEKYDLQVLRFFMLSAHY 300
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDE 372
RSPLN+S +++A + + I +++ + + T P AE + + +
Sbjct: 301 RSPLNFSAELMEAAGNGLNRIVNAVENLKFLAGNASQETLT---EPEAETQKALAEYEKK 357
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F M DD NT+ ++ F+ +KF N+++ + +L E+++ +++ E+
Sbjct: 358 FDDAMDDDFNTADAISAIFE-LVKFANTNVT-------EDSSKALAEAVK---DKIVELS 406
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
ILGL+ K+ E+ + ++ LIEER AARK K+F+++D+IR L
Sbjct: 407 DILGLIVE---------------KKEEMLDAEIEALIEERQAARKAKNFARADEIRDILL 451
Query: 493 RKGIALMDMGKETIWR 508
KGI L D + W+
Sbjct: 452 GKGIILKDTREGVKWK 467
>gi|336421767|ref|ZP_08601922.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
gi|336009616|gb|EGN39607.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 468
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/495 (40%), Positives = 281/495 (56%), Gaps = 30/495 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++++QKE F P+ GKV MYVCG T Y+ H+G+AR + FD + RY E+ +V
Sbjct: 1 MKLYNTLSKQKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYDV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV NFTDVDDKII+RA + G + +S RY E DM + P T P ++ + +
Sbjct: 61 NYVSNFTDVDDKIIKRAIEEGVSSDEISKRYIAECKKDMDGMNIKPATKNPLATEEICGM 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPA 195
DMI +I+ AY G V++ K YG+LS + L++ R+GER V + K +P
Sbjct: 121 VDMIQTLIDKGYAYEKNGTVYYRTRKFEEYGKLSHKNLDDLRSGERSLLVTGEDEKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK K GEP+W+SPW GRPGWHIECS MS YL + DIH GG DL+FPHHENEI
Sbjct: 181 DFVLWKPKKEGEPAWESPWSDGRPGWHIECSEMSKKYLGEQIDIHAGGEDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA YWMHN + +N KMSKSLGNF T+R+I+++Y LR F++SAHYR
Sbjct: 241 AQSEAANGKEFAKYWMHNAFLNIDNRKMSKSLGNFRTVREISQQYDLQILRFFMLSAHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SPLN+S ++++ + I + + L + T A ++ EF
Sbjct: 301 SPLNFSADLMEASKSGLERIVNAADNLKFLLGNAKSESMTQEEEAAFAKTAEYVQ-EFER 359
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ + F D +K+IN++ + K K+ Q L+ L +L
Sbjct: 360 AMDDDFNTADAIASVF-DLVKYINTTADADKSKEFLQNLFDLLVKLTD----------VL 408
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL+ K+ E+ ED+ ++IEER AARK KDF+++D IR +L KG
Sbjct: 409 GLIVD---------------KKEEMLAEDIEKMIEERQAARKAKDFARADAIRDELLAKG 453
Query: 496 IALMDMGKETIWRPC 510
I L D + W+
Sbjct: 454 IVLEDTREGVKWKKA 468
>gi|390566443|ref|ZP_10246825.1| cysteinyl-tRNA synthetase [Nitrolancetus hollandicus Lb]
gi|390170307|emb|CCF86174.1| cysteinyl-tRNA synthetase [Nitrolancetus hollandicus Lb]
Length = 466
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/494 (43%), Positives = 290/494 (58%), Gaps = 32/494 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ LKI N++T +KE+F P+ PG+V MYVCG T Y +H+GHA +A+ FD++ RYLE+
Sbjct: 1 MALKITNTLTGRKEVFEPLEPGRVRMYVCGPTVYSEAHIGHAMSAIIFDVIRRYLEYAGH 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVT+V+NFTD+DDKII+RA LG P L+ R +++L + A L P T PR + ++
Sbjct: 61 EVTFVQNFTDIDDKIIQRAATLGIPPEELAERLIRDWLTETAALNIKPATIYPRATQEID 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I+++I +IN+ AY +GDVF+ V P YG+LS +++E AG RV VD RK +P D
Sbjct: 121 VIQEIIQGLINSGHAYAADGDVFYRVLSFPGYGKLSKRQIEEMLAGARVEVDPRKEHPMD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GEP+W+SPWGPGRPGWHIECSAM H+L + DIHGGG DLIFPHHENEIA
Sbjct: 181 FVLWKAAKPGEPAWESPWGPGRPGWHIECSAMIIHHLGNAIDIHGGGSDLIFPHHENEIA 240
Query: 257 QSCA-ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
QS A Q V YW+HNG + EKMSKSLGN +IR++ +R R ++S+HYR
Sbjct: 241 QSEAFLAQAPWVRYWIHNGLLQLGEEKMSKSLGNLISIRELLDRGGGEIFRFLVLSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
+PL ++ + A + LQ P QE +P A+ R FH
Sbjct: 301 NPLTFTDESFEGAKRGL----ARLQGAVRGFQP-QEVPTQPPDHPLAK-AAESARQGFHR 354
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F D + IN ++ + E++ ++ +KE+ +L
Sbjct: 355 AMEDDFNTPVALAQLF-DLAREINR----------EEAAGTAPETVAYAQSVLKELAGVL 403
Query: 436 GLLPPGAYSEVLQQLKDKALKRA-ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
GL L++ +RA E E V LI R R+ K + +DQIR+ LT
Sbjct: 404 GL-----------TLREP--ERADEAIEPFVELLIAVRRDLRERKQWDLADQIRSRLTEL 450
Query: 495 GIALMDMGKETIWR 508
GIAL D + T WR
Sbjct: 451 GIALEDTAQGTTWR 464
>gi|153005356|ref|YP_001379681.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
gi|171769386|sp|A7HDA1.1|SYC_ANADF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152028929|gb|ABS26697.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 482
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/501 (41%), Positives = 285/501 (56%), Gaps = 30/501 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ + I +++T K PI PGK+ Y CG T YD +H+GH R+ V +DL+ R+L
Sbjct: 1 MPIVISDTLTGTKRELQPIEPGKIRFYACGPTVYDSAHVGHGRSYVVWDLVVRHLRARGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YVRNFTDVDDKIIRRA + E+P++L+ RY +E+ DM L L P P+VS+H+
Sbjct: 61 EVRYVRNFTDVDDKIIRRATERREDPVALAARYAREFDEDMDALGNLRPDVAPKVSEHVP 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
QI MI+ ++ AY GDV+F+V P+YGRLS + L++ +G RV KR+P
Sbjct: 121 QIVAMISSLVEKGFAYAAANGDVYFSVRAFPDYGRLSKRNLDDLLSGARVEPGEAKRDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKAAK GEP+WDSPWG GRPGWHIECSAM+ +L D+HGGG DL+FPHH NEI
Sbjct: 181 DFALWKAAKPGEPTWDSPWGGGRPGWHIECSAMTLAHLGVPIDLHGGGKDLVFPHHTNEI 240
Query: 256 AQSCAACQDSNVS-----YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
AQS AA D + +WMH+G V ++EKMSKSLGNFFT+R + ++ +R F +
Sbjct: 241 AQSAAAVGDGRTAESFCRHWMHHGFVEIDSEKMSKSLGNFFTLRDVLAKFDAEGVRLFYL 300
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEV---ALSPFQEHGKTARINPAAEDCIN 367
HYR+P+NYS L A + Y Y+TL+ + SP E G ED
Sbjct: 301 GTHYRNPINYSDAILAEAERRLNYFYETLEKVDALAEGTSPAGEGGGV------VEDARR 354
Query: 368 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 427
L DD N +L +A N+ + KK P+ + L +
Sbjct: 355 AL--------DDDFNAPQVLA-VLAEAFTAANALADKRGKKTPEDRA-----RLAAFARD 400
Query: 428 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 487
V+E+ LGL+ + A +R + V I ERA AR+ +DF++SD I
Sbjct: 401 VREIGTTLGLVQRRPAEALRAIRARAAARRG-IDPASVEAKIVERAEARRARDFARSDAI 459
Query: 488 RADLTRKGIALMDMGKETIWR 508
R L +G+ALMD + T W+
Sbjct: 460 RDALLAQGVALMDGPQGTTWK 480
>gi|375000267|ref|ZP_09724607.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353074955|gb|EHB40715.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
Length = 461
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IDLTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + + +P AR A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKGEDMAAAN-AMASHLRKISG-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R LT G
Sbjct: 394 LEQEPDVFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|452747914|ref|ZP_21947703.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
gi|452008063|gb|EME00307.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
Length = 461
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/493 (42%), Positives = 277/493 (56%), Gaps = 36/493 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L IYN++T+ KE F P+ KV MYVCG+T YD H+GHAR ++FD++ R+L H
Sbjct: 1 MALSIYNTLTKTKEAFRPLEDNKVRMYVCGMTVYDFCHIGHARVMIAFDVVTRWLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKIIRRA++ GE +L R D L L P +PR +DH+
Sbjct: 61 DVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDIEPRATDHIA 120
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K++P
Sbjct: 121 GMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSWDSPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 241 AQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ A PA D + F A
Sbjct: 301 SPINYSEDSLREAKSALERFYNGLKGLPEA-------------QPAGGD---EFVARFAA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N+ F+ + +N L++ E+ +VL +L
Sbjct: 345 AMDDDFNSPEACAVLFE-----MIREVNRLRESDLPAAAALAARL-----KELADVLGVL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P L+ A + + TE V LI R AR K++++SD+IR LT G
Sbjct: 395 QLEPE-------TFLQAGAAGKVDATE--VEALIAARLTARAEKNWAESDRIRDQLTAMG 445
Query: 496 IALMDMGKETIWR 508
+ L D T WR
Sbjct: 446 VVLEDGKGGTTWR 458
>gi|334123097|ref|ZP_08497127.1| cysteine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
gi|333391213|gb|EGK62333.1| cysteine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
Length = 461
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ T R PAA + R F M
Sbjct: 302 LNYSEENLKQARAALERLYTALR-------------GTDRSVPAAGGEAFEAR--FVEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI+ R AR+ KD++ +D R LT G
Sbjct: 394 LEQEPDVFLQSGAQADDGEVAEIE-------ALIKARLEARQAKDWAAADAARNRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|313891890|ref|ZP_07825492.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
gi|313119665|gb|EFR42855.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
Length = 481
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/492 (41%), Positives = 286/492 (58%), Gaps = 20/492 (4%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++ ++K++ PI GKV +YVCGVT Y+ H+G+AR AV++D++ RYLE++ V
Sbjct: 4 IKVYNTLKREKQILKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGYHV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTDVDDKII +AN + ++S RY Y M L P VS HM I
Sbjct: 64 DFIQNFTDVDDKIINKANAEKSDWKTVSTRYIDAYFKVMDALHIRRADIYPYVSKHMGDI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
DM+ +I AYV+ DV++ + +Y +LSG+++E+ AG RV V++ KRNP DFA
Sbjct: 124 IDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVNTAKRNPGDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEP W+SPWG GRPGWHIECS MS HYL + FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRSPL
Sbjct: 244 EGATGQKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSPL 303
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHAR 376
++S +L+ A + L+D + ++ N + + + +EF
Sbjct: 304 DFSDERLEEAEKNM----SKLKDVIARIKEMEKEDGKVETNESVSLKKAAARTIEEFRQA 359
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M+DD NT + TG D +K IN N + ++ ++IE+ + K +L ILG
Sbjct: 360 MNDDFNTG-LATGVLFDFVKDINIYYNAVNSGVAIDKE-AVIEA----KETFKTILDILG 413
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+L +E Q L E ++ R ARK K + +D+IR L GI
Sbjct: 414 ILE----NEWNIQESHAGSDYDALME----MILSVREIARKEKQYKLADEIRDKLAELGI 465
Query: 497 ALMDMGKETIWR 508
+ D W+
Sbjct: 466 TVEDSATGARWK 477
>gi|449472388|ref|XP_004153579.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 465
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 6 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 66 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 125
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 126 IEITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 246 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ T R PAA + R F M
Sbjct: 306 LNYSEENLKQARAALERLYTALR-------------GTDRSVPAAGGEAFEAR--FVEVM 350
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 351 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 397
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI+ R AR+ KD++ +D R LT G
Sbjct: 398 LEQEPDVFLQSGAQADDGEVAEIE-------ALIKARLEARQAKDWAAADAARNRLTEMG 450
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 451 IILEDGPQGTTWR 463
>gi|375111151|ref|ZP_09757362.1| cysteinyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
gi|374568693|gb|EHR39865.1| cysteinyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
Length = 459
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/496 (44%), Positives = 296/496 (59%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++QKE+FTPI PGKVG+YVCG+T YD H+GHAR V+FD++ RYL +V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE+ +L+ R+ Q D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFNALGLLPADIEPTVTGHMQEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q+++ AY+ +GDV F V K YG LS Q LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYQAYGALSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAMSA +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ W+H G V + EKMSKSLGNFFT++++ +Y+ A+R+FL+S+ YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L+D I PA + D N F A
Sbjct: 302 LNYSKENLEQAHAALGRLYNALRD----------------ITPATQVDLNNDYVTRFKAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F+ + +N K +P K +L+ + ++ + +L
Sbjct: 346 MDDDFNTPEALPVLFE-----LAREVNRFKTTEPAKAAELAAV---------LQTLAGVL 391
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
G+L A +A ++ ++++V Q LI +R AAR KD++ +D RA+LT
Sbjct: 392 GILQGDA----------EAFLKSGASDDEVGQIEALIAKRNAARAAKDWAAADAARAELT 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 ALGIVLEDKNGVTSWR 457
>gi|384173755|ref|YP_005555140.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349592979|gb|AEP89166.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 466
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 281/497 (56%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + + Q++ AY EGDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ A + A S Q H + N +D + + R
Sbjct: 301 PINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F D K N L K + IE +I
Sbjct: 353 AFEEAMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI------- 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +LG +L EL ++++ LIE+R AR+N+DF+ SDQIR L
Sbjct: 403 VSVLGF----------------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMKIILEDTAQGTRWK 463
>gi|406903893|gb|EKD45834.1| hypothetical protein ACD_69C00115G0004 [uncultured bacterium]
Length = 468
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/490 (42%), Positives = 289/490 (58%), Gaps = 36/490 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+ IYN++T++KEL PI P K+G+YVCG+T YD H+GH R + FD+L RYL + +V
Sbjct: 2 IHIYNTLTKRKELLKPIDPPKIGLYVCGLTVYDDCHIGHGRLFIWFDVLTRYLRSVGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+YVRN TD+DDKII+RA +L + L+ + D L +PP ++PRV+DH+ +I
Sbjct: 62 SYVRNITDIDDKIIKRAQELNIDYKELTKQVIASMHADEKLLGNIPPDFEPRVTDHIPEI 121
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
DMI +I+ + AY +G DV+++V K YG LS + + G RV V K++P DF
Sbjct: 122 IDMIQTLIDKNFAYPTKGGDVYYSVAKFKKYGELSHKDIGGLLLGIRVEVSEDKQDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWKAAK+ EP W SPWG GRPGWHIECSAM+ YL FDIHGGG DL FPHH+NE+AQ
Sbjct: 182 VLWKAAKSKEPFWPSPWGNGRPGWHIECSAMAKKYLGKTFDIHGGGSDLQFPHHQNELAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S AA V+YWMH G V +N EKMSKSLGNFFT++++ ++Y+P LR+F++ +HYRS
Sbjct: 242 SEAANDCPFVNYWMHIGFVQSNQEKMSKSLGNFFTLKEVLKKYNPEVLRYFVVISHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+NYS LD+A A+ Y +++ E T + N+ FHA M
Sbjct: 302 INYSQENLDNAQSALQRFYISMRSLPT------EKNITFETD-------NQFYKNFHAAM 348
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D + IN L ++ Q Q +L++ L
Sbjct: 349 QDDFNTPKAIAILF-DLAREIN-QLRDSSQELKAQNQCALLKHL---------------- 390
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
G +LQ+ + LK + E + LI R AR+NK++ ++D+IRA+LT GI
Sbjct: 391 ---GWSLGILQENPETFLKFG-VNIEKIETLIAARNQARQNKNWHEADKIRAELTTMGIT 446
Query: 498 LMDMGKETIW 507
L D G T W
Sbjct: 447 LEDTGAGTTW 456
>gi|433654077|ref|YP_007297785.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292266|gb|AGB18088.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 464
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/490 (39%), Positives = 295/490 (60%), Gaps = 28/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F P+ V MYVCG T Y+ H+G+ARA + FD + RY E+ +V
Sbjct: 1 MKIYNTLTRKKEEFVPLNDNIVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYFEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDK+I+R+++ L++RY +EY D L T PR +++++ I
Sbjct: 61 NYVQNFTDIDDKLIKRSHEENTTVKELADRYIEEYFKDADSLGIKRATVHPRATENIDDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ + ++I+ AYV+ GDV++ K YG+LS + ++ +AG R+ V+ K+NP DF
Sbjct: 121 INFVKKLIDKGFAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARIEVNEDKKNPTDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA +WMH G++ NNEKMSKS NFFT+R IT +Y P LR F++++HYR+P+
Sbjct: 241 EAANDAEFARFWMHIGYLNINNEKMSKSKNNFFTVRDITSQYDPEVLRFFMLTSHYRNPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
N+S L+ + + T+ + L + + + A ++ ++ + F M
Sbjct: 301 NFSHDLLEQSKSGFLRLSNTVDNLRHLLDDALDR-ELSDEEKAYKEKYDEYKKRFEEAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F+ ++ IN++++ PK+ LIE + I ++ VL I
Sbjct: 360 DDFNTADAISVLFE-MVRDINTNID---GNSPKE----LIEYILDIFLKLSSVLGI---- 407
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
+ K+ +L ++++ +LIE+R ARK K+++++D+IR +L ++GIAL
Sbjct: 408 ---------------SYKKRDLLDDEIKKLIEKREEARKAKNWAEADKIRDELKKQGIAL 452
Query: 499 MDMGKETIWR 508
D W+
Sbjct: 453 EDTPSGVRWK 462
>gi|283784327|ref|YP_003364192.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
gi|282947781|emb|CBG87337.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
Length = 461
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 286/493 (58%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P+YG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIAKGHAYVADNGDVMFDVPTDPSYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++P AR A M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFIDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKNEDMAAAN-AMASHLRKIS-------AVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + + E LI++R ARK KD++ +D R L G
Sbjct: 394 LEQEPEAFLQSGAQADDGEVAQIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|333896167|ref|YP_004470041.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111432|gb|AEF16369.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 464
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 295/490 (60%), Gaps = 28/490 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F P+ V MYVCG T Y+ H+G+ARA + FD + RYLE+ +V
Sbjct: 1 MKIYNTLTRKKEEFVPLNDNVVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDK+I+R+++ L++RY +EY D L T+ PR ++++++I
Sbjct: 61 NYVQNFTDIDDKLIKRSHEENTTVKELADRYIEEYFKDADSLGIKRATFHPRATENIKEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ + ++I+ AY +G+V++ K +YG+LS + ++ +AG R+ V+ K+NP DF
Sbjct: 121 IEFVKKLIDKGFAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARIEVNEDKKNPTDFV 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEP WDSPWG GRPGWHIECS MS +L DIH GG DLIFPHHENEIAQS
Sbjct: 181 LWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKFLGKTLDIHAGGPDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMH G++ NNEKMSKS NFFT+R + +Y P LR F++ +HYR+P+
Sbjct: 241 EAANDAEFAKYWMHIGYLNINNEKMSKSKNNFFTVRDVISQYDPEVLRFFMLMSHYRNPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
NYS ++ A + + T+ + + L E + + A ++ + R +F M
Sbjct: 301 NYSQDLIEQAKNGYLRLSNTVYNLQHLLD-VAEDRQLSDEEKAYKEKYEEYRRKFEEAMD 359
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD NT+ ++ F+ ++ INS+++ PK+ LI+ + + + VL I
Sbjct: 360 DDFNTADAISVIFE-MVRDINSNID---GNSPKE----LIKYILDVFLNLSSVLGI---- 407
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
K+ EL ++++ +LIE+R ARK K+++++D+IR +L ++GI L
Sbjct: 408 ---------------TYKKKELLDDEIKELIEKRQEARKAKNWAEADRIRDELKKQGIVL 452
Query: 499 MDMGKETIWR 508
D W+
Sbjct: 453 EDTPNGVRWK 462
>gi|397169815|ref|ZP_10493244.1| cysteinyl-tRNA synthetase [Alishewanella aestuarii B11]
gi|396088598|gb|EJI86179.1| cysteinyl-tRNA synthetase [Alishewanella aestuarii B11]
Length = 459
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/496 (44%), Positives = 296/496 (59%), Gaps = 46/496 (9%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN++++QKE+FTPI PGKVG+YVCG+T YD H+GHAR V+FD++ RYL +V
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + GE+ +L+ R+ Q D L LP +P V+ HM++I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFKALGLLPADIEPTVTGHMQEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
M+ Q+++ AY+ +GDV F V K YG LS Q LE +AG RV V K +P DF
Sbjct: 122 ILMVQQLLDKGYAYIAKDGDVLFDVSKYQAYGALSQQNLEMLQAGARVEVSDSKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK GEP W SPWG GRPGWHIECSAMSA +L + FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKTAKPGEPYWQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+ W+H G V + EKMSKSLGNFFT++++ +Y+ A+R+FL+S+ YRS
Sbjct: 242 STCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLLSSQYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L+ A A+ +Y L+D I PA + D N F A
Sbjct: 302 LNYSKENLEQAHAALGRLYNALRD----------------ITPATQVDLNNDYVARFKAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT L F+ + +N K +P K +L+ + ++ + +L
Sbjct: 346 MDDDFNTPEALPVLFE-----LAREVNRFKTTEPAKAAELAAV---------LQTLAGVL 391
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLT 492
G+L A +A ++ ++++V Q LI +R AAR KD++ +D RA+LT
Sbjct: 392 GILQGDA----------EAFLKSGASDDEVGQIEALIAKRNAARAAKDWAAADAARAELT 441
Query: 493 RKGIALMDMGKETIWR 508
GI L D T WR
Sbjct: 442 ALGIVLEDKNGVTSWR 457
>gi|403054114|ref|ZP_10908598.1| cysteinyl-tRNA ligase [Acinetobacter bereziniae LMG 1003]
Length = 457
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/460 (43%), Positives = 274/460 (59%), Gaps = 29/460 (6%)
Query: 21 IYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEVTY 80
+YNS ++K F P G + MYVCG+T YD H+GHAR V+FD + R+L V Y
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVKY 65
Query: 81 VRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKD 140
VRN TD+DDKII RAN+ GE+ +L++R+ Q D +L CL P PR +D+++Q+++
Sbjct: 66 VRNITDIDDKIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQN 125
Query: 141 MITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADF 197
MI ++N AY GDV+F VEK YGRLSG++L++ +AG ERV VD K++P DF
Sbjct: 126 MIGHLVNKGAAYPSANGDVYFEVEKFARYGRLSGRKLDDMQAGASERVDVDVEKKHPFDF 185
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 186 VLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQ 245
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A+ + V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP
Sbjct: 246 SEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSP 305
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+N+S L A + Y A +Q+ + E + + F+ M
Sbjct: 306 VNFSDFALKEAKTTLSRFYH-------AFKAYQQVYADLSTDVLDETFVER----FNIAM 354
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NTS + F+ I LN K++ +Q +LR + N ILGL
Sbjct: 355 RDDFNTSEAIAVLFE-----IIKELNRAVKEENAEQATLYYSTLRHLTN-------ILGL 402
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 477
+ + + +AL L+E D+ I++R A+K
Sbjct: 403 VQYNVDEFLKSDIGQEALG---LSEADITDFIQQRVDAKK 439
>gi|418849052|ref|ZP_13403787.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392822399|gb|EJA78211.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
Length = 461
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
ALWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 ALWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + + +P AR A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKGEDMTAAN-AMASHLRKISG-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R LT G
Sbjct: 394 LEQEPDVFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|423422323|ref|ZP_17399354.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
gi|401120040|gb|EJQ27841.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
Length = 465
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/495 (42%), Positives = 300/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE++
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYIGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + AE I K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--IEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ +LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|423119049|ref|ZP_17106733.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
gi|376399695|gb|EHT12309.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
Length = 461
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNILRPDMEPRATHHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F+V PNYG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEQLIARGHAYVADNGDVMFSVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGNGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G + PA D F M
Sbjct: 302 LNYSEENLKQARSALERLYTALR------------GTDKSVEPAGGDAFEA---RFIEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + + ++++ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKTED--------VAAANAMAAHMRKLSGVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E +LI++R ARK KD++ +D R L G
Sbjct: 394 LEQEPDVFLQSGAQADDGEVAEIE-------RLIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|161504307|ref|YP_001571419.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|187631629|sp|A9MLA7.1|SYC_SALAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160865654|gb|ABX22277.1| hypothetical protein SARI_02415 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 461
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + + +P AR A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMTAAN-AMASHLRKISG-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R LT G
Sbjct: 394 LEQEPDAFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|359410050|ref|ZP_09202515.1| cysteinyl-tRNA synthetase [Clostridium sp. DL-VIII]
gi|357168934|gb|EHI97108.1| cysteinyl-tRNA synthetase [Clostridium sp. DL-VIII]
Length = 466
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 287/492 (58%), Gaps = 31/492 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++IYN++T+QKE F PI G+V MYVCG T Y+ H+G+ R + FD + RYLE+ +V
Sbjct: 1 MRIYNTLTKQKEEFIPITSGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTD+DDK+I +AND G L ++Y +EY D L+ T PR ++++ I
Sbjct: 61 TFIQNFTDIDDKMINKANDEGITVKELGDKYIKEYYQDADALKIERATVNPRATEYINDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
I Q+I N AY ++GDV+++ +K NYG+L GQ L++ + G R++VD RKR+P DFA
Sbjct: 121 IKFIEQLIKNGFAYEIDGDVYYSTKKFTNYGKLGGQNLDDLQVGARISVDERKRDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS
Sbjct: 181 VWKAKKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHAGGMDLKFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YWMH V +N+KMSKSL NFFT R+I E Y A+R ++S HYR +
Sbjct: 241 EAVTGKPFAHYWMHAAFVNVDNKKMSKSLNNFFTAREILEEYDADAIRFLMLSGHYRIQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHAR 376
N++ LDSA ++ +Y + + E + E K + E ++K R+ F +
Sbjct: 301 NFTKELLDSAKSSIERLYNCINNLE---NLKNEVSKKTLDDKEREYLKSLDKYRENFIEK 357
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ ++ F ++ K S E K E ++E+ LG
Sbjct: 358 MDDDFNTADAISVLF-----------DLAKDLNNNINISSSSELCEKAEALMRELANPLG 406
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
+LQ +K L E ++ +LI++R ARK++DF+ +D+IR DL + I
Sbjct: 407 ---------ILQNHMEKDL------ESEIQELIDKRQQARKDRDFALADKIRDDLKSRNI 451
Query: 497 ALMDMGKETIWR 508
L D + W+
Sbjct: 452 VLEDTPQGVRWK 463
>gi|89075764|ref|ZP_01162152.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
gi|89048496|gb|EAR54071.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
Length = 460
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 284/493 (57%), Gaps = 39/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYNS+T+QKE FTPI PGK+GMYVCGVT YDL H+GH R VSFD++ RYL + ++
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+ RN TD+DDKII+RA + GE+ SL+ R E D L P +PR + + +I
Sbjct: 62 TFARNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+ ++I AYV GDV F V K +YGRLS Q L+ +AG RV +D KR+P DF
Sbjct: 122 IALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDMAKRSPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS
Sbjct: 242 SCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y +L+ + ++ AR A M
Sbjct: 302 LNYSEENLKQARSALERLYTSLRGLDTSIEAAGGEEFVARFKEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + + + ++E+ +LGL
Sbjct: 347 DDDFNTPEAYSVMFDMA-----REINRLKTDD--------VTKASALGSRMRELADVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ L+ A + + E + LI++R AR KD++ +D+ R L G
Sbjct: 394 LSQEPEAF------LQGGAGEDDNVAE--IEALIQQRLDARAAKDWAAADEARDKLLAMG 445
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 446 IILEDGAQGTTWR 458
>gi|423565552|ref|ZP_17541828.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|401193754|gb|EJR00757.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A1]
Length = 465
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 298/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ +++NR+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIANRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H + + I K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE------IEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ +LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELTQEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKG 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
>gi|392977950|ref|YP_006476538.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323883|gb|AFM58836.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 461
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 281/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
D+ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IDITEKLIARGHAYVADNGDVMFSVPTDPTYGSLSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++ AR F M
Sbjct: 302 LNYSEENLKQARSALERLYTALRGTDKSVEAAGGEAFEAR---------------FVEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ + +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSS-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI R AR+ KD++ +D R LT G
Sbjct: 394 LEQEPDAFLQSGAQADDGEVAEIE-------ALINARLEARQAKDWAAADAARNRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|226950955|ref|YP_002806046.1| cysteinyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
gi|254781234|sp|C1FMX3.1|SYC_CLOBJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226842951|gb|ACO85617.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
Length = 465
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +VPG+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKSALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F D ++ +N+++ + K+ + L LI +E+ LG+
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGSPLGI 407
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + ++++ +R + ARK K+++ +D+IR +L +GI
Sbjct: 408 LQESTKASLEEEIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIV 452
Query: 498 LMDMGKETIWR 508
L D + W+
Sbjct: 453 LEDTPQGVRWK 463
>gi|416231107|ref|ZP_11628689.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 480
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 293/493 (59%), Gaps = 28/493 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++Y++++ K F PI G++G+YVCG+T YD H+GHAR V FD++ R+L + +V
Sbjct: 11 LQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIGYQV 70
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA D GE L++R+ D L C P +PR ++H+E +
Sbjct: 71 NYVRNITDIDDKIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIENM 130
Query: 139 KDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPA 195
+ +I ++ + AY G DV++A+EK PNYG+LS + +++ +AG ERV+ KR+P
Sbjct: 131 QHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAEDKRHPF 190
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK EP W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEI
Sbjct: 191 DFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDLQFPHHENEI 250
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A + ++WMH G + + EKMSKSLGNFFTIR++ +++HP +R FL+S+HYR
Sbjct: 251 AQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREVMDKFHPETIRFFLLSSHYR 310
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+N+S L + A+ IYQ+L+ E+ I P A + ++ F
Sbjct: 311 SPVNFSDTALKESHTALSRIYQSLKSA--------ENFGVISIMPNAWE--SEAGQAFAK 360
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT ++ F + IN ++ + Q Q+ S +++L + N
Sbjct: 361 AMNDDFNTPKAVSVLF-SVVTEINRAMKA-GEYQKATQEASTLKTLASVLN--------- 409
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
+ + E LQ + K L++ ++ I +R A+ K+F+K+D IR +L R+G
Sbjct: 410 --IAQSSPHEFLQ--ANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQG 465
Query: 496 IALMDMGKETIWR 508
I L D T WR
Sbjct: 466 IELEDGRMGTTWR 478
>gi|312898320|ref|ZP_07757710.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620239|gb|EFQ03809.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 482
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/491 (41%), Positives = 290/491 (59%), Gaps = 15/491 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN+++++KE F P+ PG+V MYVCG+T Y+ SH+G+AR V++D++ RYL+HL V
Sbjct: 5 LTVYNTLSRKKEAFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYAV 64
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN + +++NRY Y M L PRVS+HM+ I
Sbjct: 65 THIQNFTDVDDKIINAANGEEVSWDTIANRYIASYFEVMDKLHIQRADKYPRVSEHMDDI 124
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI+++I N AY ++GDV++ V+ +YG LS + L++ AG R+ VD RK NP DFA
Sbjct: 125 IAMISKLIENGHAYELDGDVYYRVQSFEHYGELSHRSLDDMMAGARIEVDDRKENPMDFA 184
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK EPSWDSPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQ+
Sbjct: 185 LWKAAKPSEPSWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDLIFPHHENEIAQT 244
Query: 259 CAACQDS-NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A C V+YW+HNG +T ++EKMSKSL NFF ++ + E Y P ALR+FLIS HYRSP
Sbjct: 245 EACCNHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLEHYSPDALRYFLISNHYRSP 304
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L++S +L + ++ + + + L Q G + ++ A + ++F M
Sbjct: 305 LDFSDERLTEMTRSLERLGTAIDNTLWLLE--QPSGGKSELSAALLADAQRTMEDFETAM 362
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ F+ A K + + P + L +++ K + ILG+
Sbjct: 363 CDDFNTALASAAMFELAKKVNIYTSEVSTNGVPADSAV-----LSEVKRIFKTMTDILGV 417
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + KA + DV ++E R R K ++ +D IR L+ GI
Sbjct: 418 L-----EDRWNGTAGKADDKDYAALMDV--ILELRQECRAQKQYALADAIRDKLSDLGIT 470
Query: 498 LMDMGKETIWR 508
+ D + W+
Sbjct: 471 IEDSPQGARWK 481
>gi|383763829|ref|YP_005442811.1| cysteinyl-tRNA synthetase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384097|dbj|BAM00914.1| cysteinyl-tRNA synthetase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 469
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/492 (42%), Positives = 284/492 (57%), Gaps = 27/492 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++T++ E F P+ PGKV MYVCG T Y +H+GHA +A+ FD++ RYL +
Sbjct: 1 MALRIYNTLTRRVEEFVPLEPGKVKMYVCGPTVYADAHIGHAMSAIVFDMVRRYLLYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +V NFTDVDDKIIRRA + G +PL L+N Y EYL + DL +P T PRVS M+
Sbjct: 61 EVKFVTNFTDVDDKIIRRAAEQGRDPLELANHYANEYLRHLKDLNVMPATVYPRVSTEMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I MI + AY ++GDV+F V K +YG+LSG+RLE AG R+ D+RK +PAD
Sbjct: 121 WITQMIAGLEEEGYAYRLDGDVYFRVTKDEDYGKLSGRRLEEALAGVRIEEDARKEHPAD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP+WDSP+GPGRPGWHIECSAM H+L DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPAWDSPFGPGRPGWHIECSAMCLHHLGEVVDIHGGGNDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS + YWMH+G + EKMSKSLGN TI + +++ ALR + + HYR
Sbjct: 241 QSESYTGKPFARYWMHHGMLQLAGEKMSKSLGNLITIDEFLKKHSADALRLLIFTGHYRK 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
P+ YS ++SA ++L AL P Q T A R F
Sbjct: 301 PVVYSEEAIESAE-------RSLARLRSALRPPQGSVTTGEAADALRIATENARVAFVEA 353
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ + F+ A + INS+ + + + ++ ++E+ +LG
Sbjct: 354 MDDDFNTAGAIAALFELA-RAINSA------RSAGVAGPFFVAA----QHTLRELAGVLG 402
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
L + + D + A D+ L+ R+ R+ K ++ +D++R L G+
Sbjct: 403 L-------TLAEPTADAGVNVAAQPFIDL--LVSVRSELRQAKQWALADKVRDGLRALGV 453
Query: 497 ALMDMGKETIWR 508
L D + T WR
Sbjct: 454 VLEDTPEGTRWR 465
>gi|168178810|ref|ZP_02613474.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
gi|182669931|gb|EDT81907.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
Length = 465
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +VPG+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F D ++ +N+++ + K+ + L LI +E+ LG+
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGSPLGI 407
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + ++++ +R + ARK K+++ +D+IR +L +GI
Sbjct: 408 LQESTKASLEEEIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIV 452
Query: 498 LMDMGKETIWR 508
L D + W+
Sbjct: 453 LEDTTQGVRWK 463
>gi|156934911|ref|YP_001438827.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
gi|156533165|gb|ABU77991.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
Length = 479
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/495 (44%), Positives = 283/495 (57%), Gaps = 38/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
L LKI+N+M++QKE F PI G+VGMYVCG+T YDL H+GH R ++FD++ RYL L
Sbjct: 18 LMLKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGY 77
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
++ YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+
Sbjct: 78 KLKYVRNITDIDDKIIKRANENGEDFVALVDRMVTEMHKDFDALNILRPDSEPRATQHIP 137
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I +++ Q+I AYV GDV FAVE +YG+LS Q LE +AG RV V KRNP
Sbjct: 138 EIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRNPM 197
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEI
Sbjct: 198 DFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEI 257
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYR
Sbjct: 258 AQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYR 317
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
S LNYS L A ++ +Y L+ + + + AR A
Sbjct: 318 SQLNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVEA-------------- 363
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M+DD NT + F A +N LK + L LRK+ +L
Sbjct: 364 -MNDDFNTPEAYSVLFDMA-----REVNRLKAEDSSAAN-QLAAHLRKLAA-------VL 409
Query: 436 GLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
GLL P + + Q D + E LI +R ARK KD++ +D R L
Sbjct: 410 GLLEQEPEQFLQSGAQANDDEVAEIE-------ALIVKRLEARKAKDWAAADAARDRLNE 462
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 463 MGIILEDGPQGTTWR 477
>gi|241662706|ref|YP_002981066.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
gi|240864733|gb|ACS62394.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
Length = 463
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/500 (43%), Positives = 292/500 (58%), Gaps = 50/500 (10%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+LKIYN++ ++K+ F PI PG+V MYVCG+T YD H+GHAR V FD++ R+L +
Sbjct: 3 SLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGYD 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKII+RA + GE +L+ R+ D L P Y+PR ++++ Q
Sbjct: 63 VTYVRNITDIDDKIIKRAVENGETMSALTGRFIAAMHEDADALGVQRPDYEPRATEYVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P D
Sbjct: 123 MLGMIGKLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLD 182
Query: 197 FALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK+AKA EP+ W SPWG GRPGWHIECSAMS L FD+HGGG DL FPHHEN
Sbjct: 183 FVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGADLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A + V+ WMHNG V N+EKMSKSLGNFFTIR + + Y +R F++ +H
Sbjct: 243 EIAQSEGATGKTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDAEVVRFFILRSH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSP----FQEHGKTARINPAAEDCINKL 369
YRS LNYS LD A A+ +Y L+D A + HGK
Sbjct: 303 YRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNESHGK--------------- 347
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
F M+DD NT ++ F+ + S +N K + P ++ +++
Sbjct: 348 --RFLEAMNDDFNTPVAVSVLFE-----LASEVN--KTRSP------------ELASQLA 386
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
+ +LGLL ++ + + L AE+ IEER AA+ +DF+++D IRA
Sbjct: 387 ALAGVLGLLGRDPHAFLQGGVSPDGLDAAEVEAR-----IEERRAAKAARDFARADAIRA 441
Query: 490 DLTRKGIALMDM-GKETIWR 508
DL GI L D G T WR
Sbjct: 442 DLLAAGIVLEDKPGGVTEWR 461
>gi|398813150|ref|ZP_10571852.1| cysteinyl-tRNA synthetase [Brevibacillus sp. BC25]
gi|398039311|gb|EJL32449.1| cysteinyl-tRNA synthetase [Brevibacillus sp. BC25]
Length = 468
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/498 (41%), Positives = 293/498 (58%), Gaps = 38/498 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ +++ N+MT++KE F + PGKV MYVCG T Y+ H+G+AR A+ FD L RYL++
Sbjct: 1 MGIQLTNTMTRRKEPFHTLEPGKVKMYVCGPTVYNYIHIGNARPAIVFDTLRRYLKYRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EVT+V+N TDVDDK+IR AN G +++RY Y D+ L PP QPRV +
Sbjct: 61 EVTFVQNITDVDDKLIRVANQEGVTVKEVADRYTDAYNADLKSLNVTPPDIQPRVMQTIP 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+I + + +I AY EGDV+F + YG+LS Q L++ +AG RV ++ +K +P D
Sbjct: 121 EIIEFVQGLIEKGFAYESEGDVYFRTGRFQEYGKLSHQPLDDLQAGARVEINEKKEHPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE +WDSPWG GRPGWHIECSAM+ +L + DIH GG DL+FPHHENEIA
Sbjct: 181 FVLWKAAKTGEVTWDSPWGDGRPGWHIECSAMALKFLGEEIDIHAGGTDLVFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS YW+HNG + +NEKMSKSLGNF R ++E++ +R F++ HYR+
Sbjct: 241 QSECFTGKVFARYWLHNGMLNIDNEKMSKSLGNFLLARDLSEKFGGQLIRFFMLQGHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQ---DCEVALSPFQEHGKTARINPAAEDCINKLR 370
P+N+S ++ A++ + I Y L D A P + + ARI I +LR
Sbjct: 301 PINFSEELIEQAANGLDRIKTAYTNLSHRLDTVRAEEPNDQAQEQARI-------IGELR 353
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
+ F A M DD+NT++ +T F D +K N L + Q + E +R + + E
Sbjct: 354 ERFIAEMDDDINTANAITVIF-DIVKEANLYL--------RHQNVGETE-VRAYMDLLVE 403
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
+ +LGL E+ ++ EL + ++ LIEER ARK +DF++SD+IR
Sbjct: 404 LTEVLGL-------EIAEE--------QELLDSEIDALIEERTEARKARDFARSDEIRDL 448
Query: 491 LTRKGIALMDMGKETIWR 508
L KGI L D + WR
Sbjct: 449 LAAKGIVLEDTPQGVRWR 466
>gi|451817039|ref|YP_007453240.1| cysteine--tRNA ligase CysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783018|gb|AGF53986.1| cysteine--tRNA ligase CysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 466
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/493 (39%), Positives = 291/493 (59%), Gaps = 33/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T+QKE F PI+PG+V MYVCG T Y+ H+G+ R + FD + RYLE+ +V
Sbjct: 1 MKVYNTLTKQKEEFIPIIPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I +AND G L ++Y EY D L + PR +++++ I
Sbjct: 61 EFIQNFTDIDDKMINKANDEGITVKELGDKYINEYYQDADALNIERASVNPRATEYIKDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+ ++I D AY V+GDV+++ +K NYG+L+GQ LE+ +AG R++VD RK++P DFA
Sbjct: 121 IKFVEELIAADFAYEVDGDVYYSTKKFSNYGQLAGQNLEDLQAGARISVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS
Sbjct: 181 IWKAQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHAGGMDLKFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A +YW+H V +N+KMSKSL NFFT R+I + Y A+R ++S HYR +
Sbjct: 241 EAVTGKKFANYWLHAAFVNVDNKKMSKSLNNFFTAREILQEYDADAIRFLMLSGHYRIQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED---CINKLRDEFHA 375
N++ LDSA ++ + L +C L ++ ++ +D ++K R++F
Sbjct: 301 NFTKELLDSAKASI----ERLYNCINNLENLKDEVSKKTMDNGEDDYLKSLSKYREKFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
+M DD NT+ ++ F ++ K S E + + V+E+ + L
Sbjct: 357 KMDDDFNTADAISVLF-----------DLAKDINNNVNINSSAELCEETKKLVRELGKPL 405
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G +LQ K L E ++ +LI+ R ARK++DF+ +D+IR DL +
Sbjct: 406 G---------ILQTYMKKDL------EAEIQELIDRRQQARKDRDFALADKIRDDLKSRN 450
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 451 IILEDTPQGVRWK 463
>gi|413958323|ref|ZP_11397562.1| cysteinyl-tRNA ligase [Burkholderia sp. SJ98]
gi|413940903|gb|EKS72863.1| cysteinyl-tRNA ligase [Burkholderia sp. SJ98]
Length = 465
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/498 (42%), Positives = 292/498 (58%), Gaps = 44/498 (8%)
Query: 18 TLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCE 77
+L+IYN++ + K+ FTP+ G+V MYVCG+T YD H+GHAR V FD++ R+L + +
Sbjct: 3 SLRIYNTLARDKQTFTPLRAGEVRMYVCGITVYDYCHVGHARMFVVFDIVQRWLREIGYK 62
Query: 78 VTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ 137
VTYVRN TD+DDKIIRRA + E+ SL+ R+ + DM L +PR ++ + Q
Sbjct: 63 VTYVRNITDIDDKIIRRAVENNESIKSLTQRFIEAMYEDMDALGVARADIEPRATEFVPQ 122
Query: 138 IKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
+ MI + N AY +GDV ++V K +YG+LSG+ +E+ RAGERV + K +P D
Sbjct: 123 MLGMIDALHANGYAYQAKDGDVNYSVRKFTDYGKLSGKSIEDLRAGERVTANDAKEDPLD 182
Query: 197 FALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHEN 253
F LWK +KAGEP W+S WG GRPGWHIECSAM L +FDIHGGG+DL FPHHEN
Sbjct: 183 FVLWKQSKAGEPEDTGWNSKWGRGRPGWHIECSAMGCTLLGEQFDIHGGGMDLQFPHHEN 242
Query: 254 EIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 313
EIAQS A V+YWMHNG V ++EKMSKSLGNFFTIR++ E++ +R F+ AH
Sbjct: 243 EIAQSEGATGKQFVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIARAH 302
Query: 314 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
YRSPLNYS + +D A +A+ +Y L+D E P + + N F
Sbjct: 303 YRSPLNYSDVHIDDAKNALTRLYTALKDVE----PDNQQLDWSEANA----------QRF 348
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
+ M+DD NT ++ F + S +N + +Q +K +
Sbjct: 349 QSAMNDDFNTPVAVSVLFD-----LASEVNRTRDAALARQ--------------LKGLAG 389
Query: 434 ILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+LGLL P A+ Q A L+ +++ I ER AA++ K+++++D+IRA L
Sbjct: 390 VLGLLQREPRAF----LQRASGAGSSEGLSPQEIEAKIAERIAAKRAKNYAEADRIRAAL 445
Query: 492 TRKGIALMDM-GKETIWR 508
GIAL D G T WR
Sbjct: 446 LEAGIALEDKPGGSTEWR 463
>gi|442320001|ref|YP_007360022.1| cysteinyl-tRNA synthetase [Myxococcus stipitatus DSM 14675]
gi|441487643|gb|AGC44338.1| cysteinyl-tRNA synthetase [Myxococcus stipitatus DSM 14675]
Length = 492
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/490 (42%), Positives = 295/490 (60%), Gaps = 12/490 (2%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
++++N+M+ QKEL P VPG VG+YVCG T Y H+G+AR SFD++ RYL + V
Sbjct: 9 IRLFNTMSMQKELLEPAVPGCVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGYTV 68
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRNFTDVDDKII+ A++ GE P++L++RY + + D L + P P+VS+H+ +I
Sbjct: 69 RYVRNFTDVDDKIIKAAHETGEAPVALASRYVEYFREDAKALHMVEPDVAPKVSEHLPEI 128
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+I +++ AY +GDV+F+V +Y +LS + L++ GERV +KR P DFA
Sbjct: 129 VRIIQTLVDKGFAYESQGDVYFSVRADKDYAKLSKRNLDDLSVGERVQPGDQKREPLDFA 188
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWKAAK GEPSW+SPWG GRPGWHIECSAMS YL FDIHGG +DLIFPHHENEIAQS
Sbjct: 189 LWKAAKPGEPSWESPWGLGRPGWHIECSAMSEKYLGETFDIHGGALDLIFPHHENEIAQS 248
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
+A YWMH G + KMSKSLGN +R E+ ALR F +S HYR PL
Sbjct: 249 ESAHGKDLAKYWMHCGFLDLEGAKMSKSLGNVVRLRDALEKVDAEALRFFFLSTHYRHPL 308
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS 378
++S L A + Y Y+TL+ + L+ GK P + ++ EF M
Sbjct: 309 SFSDKALADAEARMEYFYETLRKVDERLA-----GKDFGAGPVHGEP-HRFLGEFECAMD 362
Query: 379 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 438
DD N++ L AL + +N L K P + + + +L + ++V++V +LGL
Sbjct: 363 DDFNSAGALG-----ALSGLFGMMNELTDKPPVKDKPLVGRTLLALRDDVRKVSGVLGLF 417
Query: 439 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 498
A + +L++ + +R + +V +L+ ER AAR KDF+ +D++RA L KG+ +
Sbjct: 418 EDDAGAWLLRRRERAVRERG-IDVAEVERLLSERTAARAAKDFAAADRVRATLKEKGVEI 476
Query: 499 MDMGKETIWR 508
MD T W+
Sbjct: 477 MDTAGGTSWK 486
>gi|310644226|ref|YP_003948985.1| translation initiation factor if-1 [Paenibacillus polymyxa SC2]
gi|309249177|gb|ADO58744.1| Translation initiation factor IF-1 [Paenibacillus polymyxa SC2]
gi|392304919|emb|CCI71282.1| cysteinyl-tRNA synthetase [Paenibacillus polymyxa M1]
Length = 467
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/496 (40%), Positives = 293/496 (59%), Gaps = 35/496 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
++L+IYN+MT+ +E F P+ PGKV MYVCG T YD H+G+AR + FD++ YLE+L
Sbjct: 1 MSLQIYNTMTRSREPFVPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+IR+A +L +++ ++ Y D+A L + PRV++ M+
Sbjct: 61 DVNYVVNFTDVDDKLIRKARELNMEVPAVAEKFIAAYHEDLAGLNVPAASINPRVTESMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I D I +++ AY +GDVF+ +K +YG+LSGQ LE + G R+ VD RK N D
Sbjct: 121 LIIDFIKDLVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVDERKENAED 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
F LWKAAK GE W SPWG GRPGWHIECSAM+ HYL DIHGGG DL FPHHE E A
Sbjct: 181 FVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS YWMHNG++ +NEKMSKSLGN ++ + R+ P ALR+F++S HYR+
Sbjct: 241 QSEVITGKPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRARHKPEALRYFMLSTHYRN 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCE----VALSPFQEHGKTARINPAAEDCINKLRDE 372
PLNY+ + A ++V I + + + +AL +E ++ + ++ + +
Sbjct: 301 PLNYNQETMSQAENSVERIANAVANVKHRLAIALKGNEE------VSAELQMKLDGILQQ 354
Query: 373 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 432
F +M DD NT +T F+ +++ + +L++ Q +L +++ + + VL
Sbjct: 355 FGEKMDDDFNTPDAITAVFE----WVSEANLLLQRDVVNQAEL---QAVLHTFHSMNTVL 407
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 492
RI YSE ++L D +V QLI ER ARK K++ ++D+IR L
Sbjct: 408 RI--------YSEPSEELLDG----------EVEQLIAERVEARKTKNWGRADEIRDLLA 449
Query: 493 RKGIALMDMGKETIWR 508
KGI L D + WR
Sbjct: 450 TKGIVLEDTAQGMRWR 465
>gi|167550932|ref|ZP_02344688.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205324269|gb|EDZ12108.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 461
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGTDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + + +P AR A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKGEDMTAAN-AMASHLRKISG-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R LT G
Sbjct: 394 LEQEPDVFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|419762171|ref|ZP_14288420.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397745089|gb|EJK92298.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 478
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 287/493 (58%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R VSFD++ RYL L ++
Sbjct: 19 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 78
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 79 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 138
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V PNYG LS Q L+ +AG RV V KRNP DF
Sbjct: 139 IEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDF 198
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 199 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 258
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 259 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQ 318
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ G ++ A + F M
Sbjct: 319 LNYSEENLKQARSALERLYTALR------------GTDKSVDAAGGEAFEA---RFIEAM 363
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N L K + ++ LRK+ +LGL
Sbjct: 364 DDDFNTPEAYSVLFDMA-----REVNRL-KTEDAAAANAMAAHLRKLA-------AVLGL 410
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q+ D AE+TE + LI++R ARK KD++ +D R L G
Sbjct: 411 LEQEPEAFLQSGAQVDD-----AEVTE--IESLIQQRLDARKAKDWAAADAARDRLNEMG 463
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 464 IVLEDGPQGTTWR 476
>gi|420155520|ref|ZP_14662380.1| cysteine--tRNA ligase [Clostridium sp. MSTE9]
gi|394759006|gb|EJF41818.1| cysteine--tRNA ligase [Clostridium sp. MSTE9]
Length = 467
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/493 (41%), Positives = 296/493 (60%), Gaps = 32/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T+QKE F PI G+ +Y CG T Y+ H+G+AR FD+L RY+E+ +V
Sbjct: 1 MKIYNTLTRQKEEFIPIKEGEAKIYACGPTVYNFIHIGNARPICVFDVLRRYMEYRGLKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTD+DDKIIR+AN+ + L++S +Y +EY D L P T P ++ ME I
Sbjct: 61 TYVQNFTDIDDKIIRKANEEETDYLTVSRKYIEEYKTDAKGLNVRPATVHPLATESMEDI 120
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++ AY GDV+F +K YG+LS Q L++ +AG R++VD K + DF
Sbjct: 121 LQIIQTLVEKGYAYAAPNGDVYFRTKKFDEYGKLSHQPLDDLQAGARISVDEVKEDAMDF 180
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
A+WK+AK GEPSWDSPWG GRPGWHIECSAM+ H+L + DIH GG DLIFPHHENEIAQ
Sbjct: 181 AVWKSAKPGEPSWDSPWGKGRPGWHIECSAMARHFLGNTIDIHCGGQDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S YWMHNG++ +N KMSKSL NFFT+R++ Y +R ++S+ YRSP
Sbjct: 241 SECCNGVPFAHYWMHNGYINVDNHKMSKSLNNFFTVREVANVYGYEPIRFLMVSSQYRSP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHA 375
+NYS+ ++ A+ +Y +C L+ +++ + E D ++ R F
Sbjct: 301 INYSIEIIEQCKSALDRLY----NCRDNLTFARDNAPEGLKDGEQEQIDALDSFRQRFIT 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DDLNT+ ++ F D + IN++L P ++ L + K+ E+ +V L
Sbjct: 357 AMDDDLNTADAISVLF-DLAREINTNL------IPGEKSKELYNAALKLYGELADV---L 406
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
GL L Q KD++L +E++ LI++R ARKNKD++ +D+IR +L +
Sbjct: 407 GL---------LYQRKDQSL------DEEIEALIQQRTDARKNKDWATADRIRDELKARH 451
Query: 496 IALMDMGKETIWR 508
+ L D + W+
Sbjct: 452 VVLEDTPQGIKWK 464
>gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 484
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/500 (40%), Positives = 296/500 (59%), Gaps = 31/500 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L++YN+++++KE FTP+ GKV MYVCG+T + +H+GH R+AV++D++ RYLE+ EV
Sbjct: 2 LRVYNTLSRKKEKFTPLETGKVRMYVCGLTVQNYAHIGHIRSAVNYDVIRRYLEYKGYEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYV+NFTD+++KI+ RA + G PL L+++Y + YL D+ ++ R +D +++I
Sbjct: 62 TYVQNFTDINEKIVARAREEGLRPLELADKYTKAYLEDIEKMKIKRADVYCRATDTIKEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
M+ ++++ AY V G+V+F+VEK +YG+LSG+ LE +AG RV V+ KR+P DFA
Sbjct: 122 IKMVKKLLDKGYAYEVNGNVYFSVEKFSDYGKLSGRNLEEMQAGARVEVNEEKRHPMDFA 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK A AGE SWDSPWG G PGWHIECSAMS YL + DIHGGG DLIFPHHENEIAQS
Sbjct: 182 LWKKAPAGEISWDSPWGKGWPGWHIECSAMSIKYLGKRIDIHGGGTDLIFPHHENEIAQS 241
Query: 259 -CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
+ V YW+HNG V EKMSKSLGNFFT+R+I + + P +R+FL++ HYRSP
Sbjct: 242 ESCTGEKPFVKYWLHNGSVNLKGEKMSKSLGNFFTVREILKEFKPDEVRYFLLTKHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI----NKLRDEF 373
++++ ++++A + + T Q L N E+ I NK EF
Sbjct: 302 IDFNFEEVEAARKSWRKLVNTYQVMVQILEKGVITKNKITENTKGENTIISILNKKEKEF 361
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK-QQQLSLIESLRKIENEVKEVL 432
M DD NT+ TG + + IN+ +N P+ + + L+K +N
Sbjct: 362 EEAMDDDFNTARA-TGVMHELAREINTFVN-----SPEFELNGETSKVLKKAQNLFDRFS 415
Query: 433 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-----LIEERAAARKNKDFSKSDQI 487
ILGL D A ++ + ++L ++E R AR+ K++ +D+I
Sbjct: 416 DILGL--------------DLAFSSSDEVDNEILNNLVDFILEIRDEARQEKNWQLADRI 461
Query: 488 RADLTRKGIALMDMGKETIW 507
R L G + D W
Sbjct: 462 RDGLEDLGFEIKDTPHGVRW 481
>gi|192361138|ref|YP_001982161.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
gi|190687303|gb|ACE84981.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
Length = 466
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 289/495 (58%), Gaps = 34/495 (6%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L+IYN++++QKE F P+ PGK+ MYVCG+T YD H+GHAR V+FD++ ++L
Sbjct: 1 MALQIYNTLSRQKEEFKPLKPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGW 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+VTYVRN TD+DDKII+RAN+ GE L+ R+ D A L P +PR + ++
Sbjct: 61 DVTYVRNITDIDDKIIKRANENGEQYTDLTKRFIDYMHEDEARLGIARPDIEPRATAFID 120
Query: 137 QIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
QI +M +I+ AY GDV++ V + +YG+L+ + ++ G R+ VD K +P
Sbjct: 121 QIINMNQALIDKGYAYPASNGDVYYRVTRFADYGKLTNKNVDELLVGARIEVDEIKEDPR 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWKAAKAGEP+W SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEI
Sbjct: 181 DFVLWKAAKAGEPAWKSPWGQGRPGWHIECSAMSKDCCGTTFDIHGGGPDLPFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA V+YWMH G V + EKMSKSLGNFFTIR + E+YHP +R L+S+HYR
Sbjct: 241 AQSEAANGCKYVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLEKYHPEVVRFLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQD-CEVALSPFQEHGKTARINPAAEDCINKLRDEFH 374
SP+NY+ L A + Y L+D +V P E A D F
Sbjct: 301 SPINYAEDNLVEARTGLERFYGALRDYADVESLPLTE--------LQASDYYRS----FV 348
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
A M+DD NT L + D ++ +N++ + +E +++ E+K + I
Sbjct: 349 AAMNDDFNTRVALASMY-DLVRELNNAGK------------TDVERAQRLAGELKALGLI 395
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LG+L V Q ++ E+V +L+ ER A+K K+++++D++R L
Sbjct: 396 LGILQEN--PRVFLQTGTS----GQIAAEEVDRLVAERIQAKKEKNYARADEVRKQLADN 449
Query: 495 GIALMDMGKETI-WR 508
GI + D T WR
Sbjct: 450 GILIEDAKDGTTQWR 464
>gi|386756675|ref|YP_006229891.1| cysteinyl-tRNA synthetase [Bacillus sp. JS]
gi|384929957|gb|AFI26635.1| cysteinyl-tRNA synthetase [Bacillus sp. JS]
Length = 466
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/497 (40%), Positives = 281/497 (56%), Gaps = 39/497 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ +YN++T+QKE F P+ GKV MYVCG T Y+ H+G+AR A+ +D + YLE+
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + + Q++ AY EGDV+F YG+LS Q ++ R+G R+ V +K + D
Sbjct: 121 AIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YW+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR
Sbjct: 241 QSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRD 371
P+NYS L++ A + A S Q H + N +D + + R
Sbjct: 301 PINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRK 352
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT++ ++ F D K N L K + I+ +I
Sbjct: 353 AFEEAMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVITAFIQMFDRI------- 402
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
+ +LG +L EL ++++ LIE+R AR+N+DF+ SDQIR L
Sbjct: 403 VSVLGF----------------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
I L D + T W+
Sbjct: 447 KSMNIILEDTAQGTRWK 463
>gi|409397649|ref|ZP_11248512.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
gi|409117783|gb|EKM94209.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
Length = 461
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/493 (42%), Positives = 278/493 (56%), Gaps = 36/493 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+TL IY+++++ K+ F P+ KV MYVCG+T YD H+GHAR V+FD++ R+L H
Sbjct: 1 MTLSIYSTLSKSKDAFKPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVARWLRHRGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
E+TYVRN TD+DDKII+RAN+ GE+ L R D A L L P +PR +DH+
Sbjct: 61 ELTYVRNITDIDDKIIKRANENGESFQDLVARMIAAMHEDEARLNVLRPDIEPRATDHIA 120
Query: 137 QIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+ MI +I+ AY GDV++ V K YG+LS +++E+ + G R+ VD K +P
Sbjct: 121 GMHAMIQTLIDKGFAYAPGNGDVYYRVGKFAGYGKLSRRKIEDLKIGARIEVDEAKEDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DF LWK AK GEPSW+SPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEI
Sbjct: 181 DFVLWKGAKPGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEI 240
Query: 256 AQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 315
AQS AA + WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYR
Sbjct: 241 AQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYR 300
Query: 316 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 375
SP+NYS L A A+ Y L+ A PA + L + F A
Sbjct: 301 SPINYSEDSLREAKGALERFYNGLKGLPEA-------------APAGGEA---LVERFGA 344
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD N+ F+ + +N L+ E+ VL +L
Sbjct: 345 AMDDDFNSPEACAVLFE-----MIREVNRLRDSDLNAAAALAARL-----KELAGVLGVL 394
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P E Q A ++ +V LI R AAR K++++SD+IR LT G
Sbjct: 395 QLDP-----EAFLQ----AGAAGKVDAAEVEALIGARLAARAEKNWAESDRIRDQLTAMG 445
Query: 496 IALMDMGKETIWR 508
+ L D T WR
Sbjct: 446 VVLEDGKGGTTWR 458
>gi|419173997|ref|ZP_13717852.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7B]
gi|378037315|gb|EHV99843.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7B]
Length = 461
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 282/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GEN ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGENFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I AYV + GDV F V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + ++P AR F M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEAR---------------FIEAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + ++ LRK+ +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKAEDMAAAN-AMASHLRKLS-------AVLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R L G
Sbjct: 394 LEQEPEAFLQSGAQADDSEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|170754736|ref|YP_001783143.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|429246816|ref|ZP_19210112.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001628]
gi|229558626|sp|B1IGH6.1|SYC_CLOBK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169119948|gb|ACA43784.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|428756150|gb|EKX78726.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001628]
Length = 465
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +VPG+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F D ++ +N+++ + K+ + L LI +E+ LG+
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGNPLGI 407
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + ++++ +R + ARK K+++ +D+IR +L +GI
Sbjct: 408 LQESTKASLEEEIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIV 452
Query: 498 LMDMGKETIWR 508
L D + W+
Sbjct: 453 LEDTPQGVRWK 463
>gi|384415761|ref|YP_005625123.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|320016265|gb|ADV99836.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 461
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 279/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GKVGMYVCG+T YDL H+GH R V+FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RA + E L+ R E D L P +PR + H+ +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+M ++I AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GE W+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGESRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ G A PA + F M
Sbjct: 302 LNYSEENLKQARASLERLYTALR------------GTDANATPAGG---AEFEARFRTAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F I +N LK + + + + E++++ ++LGL
Sbjct: 347 DDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANGLAAELRKLAQVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + + E LI++R AR +K+++ +D R L G
Sbjct: 394 LEQDPELFLQGGAQADDDEVAKIE-------ALIKQRNDARSSKNWALADAARDQLNELG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IVLEDGPQGTTWR 459
>gi|336316096|ref|ZP_08570998.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
gi|335879586|gb|EGM77483.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
Length = 459
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/495 (43%), Positives = 288/495 (58%), Gaps = 44/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+I+N++T++KE F P+VPGKV MYVCG+T YD H+GHAR V+FD++ RYL +V
Sbjct: 2 LQIFNTLTRKKESFVPLVPGKVSMYVCGITIYDFCHVGHARTYVAFDVMNRYLRFSGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TYVRN TDVDDKII+RAN+ GE+ +L+ RY D L +P +PRV+ HM +I
Sbjct: 62 TYVRNITDVDDKIIKRANENGESCDALTARYTVAMHDDFKALGLMPADIEPRVTTHMAEI 121
Query: 139 KDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++I ++ AY+ +GDV F V K YG+LS Q L+ ++G RV +D K +P DF
Sbjct: 122 IELIETLVAKGYAYIASDGDVLFDVSKYEAYGQLSQQNLDMLQSGARVEIDQAKDDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK EPSW SPWG GRPGWHIECSAMSA +L FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKMAKPNEPSWSSPWGEGRPGWHIECSAMSAKHLGKHFDIHGGGSDLQFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ W+H G V + EKMSKSLGNFFT++ + Y+ A+R+FLIS+HYRS
Sbjct: 242 SCCAHDTPYVNTWIHTGMVQVDKEKMSKSLGNFFTVKDVLADYNAEAVRYFLISSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHAR 376
LNYS L A A+ +Y L++ + PAA+ D N F A
Sbjct: 302 LNYSAENLLQAHSALGRLYTALRE----------------VKPAADVDMNNDYVKTFSAA 345
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP-KQQQLSLIESLRKIENEVKEVLRIL 435
M DD NT+ L F+ + +N K P K QL+ +
Sbjct: 346 MDDDFNTALALPVLFE-----LARDINKEKATDPAKASQLAGL----------------- 383
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTR 493
L+ G+ +LQ + L+ +++ ++ LI +R AR NKD++ +D R L
Sbjct: 384 -LIKLGSVMGILQGDAETFLQSGTDSDDVAEIEALIAQRNTARANKDWAAADAARDALVA 442
Query: 494 KGIALMDMGKETIWR 508
KGI L D T WR
Sbjct: 443 KGIILEDKAGITTWR 457
>gi|160872079|ref|ZP_02062211.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
gi|159120878|gb|EDP46216.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
Length = 466
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 291/491 (59%), Gaps = 29/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++TQ+KE F P++ KVGMYVCG+T YD H+GHAR V FD++ RYL+ +V
Sbjct: 2 LKIYNTLTQKKEAFKPMIAKKVGMYVCGMTVYDFCHIGHARVVVVFDVILRYLKMQGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+RN TD+DDKII+RA + E+P L+ R + D L LPP +P+ +D + I
Sbjct: 62 NYIRNITDIDDKIIKRAQENNESPFELTQRMIKAMHEDFNRLNTLPPNAEPKATDAIVYI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++++ AY E GD+ F V+K YG L+ Q ++ R G RVAVD K++P DF
Sbjct: 122 IALIQRLVDKAYAYRSENGDICFDVKKFKTYGDLAHQNVQKLRRGLRVAVDITKKDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AK+GEPSW+SPWGPGRPGWHIECSAMS L FDIHGGG+DL+FPHH+NEIAQ
Sbjct: 182 VLWKKAKSGEPSWESPWGPGRPGWHIECSAMSMAALGEHFDIHGGGLDLVFPHHQNEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S V+ W+H G V + +KMSKSLGNFFT+R + ++Y +R+FLIS+HYRSP
Sbjct: 242 SEGVTDKKFVNTWIHVGFVQIDRQKMSKSLGNFFTLRDVLKQYPAEVVRYFLISSHYRSP 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
+ YS+ L +A A+ +Y +L+ V P + E+ + +++F M
Sbjct: 302 IQYSLENLQAAQAALQRLYTSLRGL-VGKGPQK---------FVLEESSKEYQEKFEHAM 351
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT L F+ A + +N L++ K Q + N ++ + +LG+
Sbjct: 352 NDDFNTPDALAILFELARR-----INRLRETNSKHAQ--------RDANCLQYLASLLGI 398
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L E Q LK K L E+ + L+ R AR K++ ++D+IR +L I
Sbjct: 399 LQ----QEPEQFLKLNQEKDPHLVEK-INGLMNARNHARAAKNWQEADRIRDELLALNIV 453
Query: 498 LMDMGKETIWR 508
L D T WR
Sbjct: 454 LEDTTTGTQWR 464
>gi|169335260|ref|ZP_02862453.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
17244]
gi|169257998|gb|EDS71964.1| cysteine--tRNA ligase [Anaerofustis stercorihominis DSM 17244]
Length = 468
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/493 (41%), Positives = 293/493 (59%), Gaps = 33/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T++KE F PI G+V MYVCG T Y+ H+G+AR + FD L RYLE+ +V
Sbjct: 1 MKLYNTLTRKKEEFVPINEGEVNMYVCGPTVYNFFHIGNARPFIIFDTLRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YV+NFTD+DDKII +A + +++++Y +EY D L T PRVS+ + I
Sbjct: 61 NYVQNFTDIDDKIINKAKEEHTTSKAVADKYIKEYFTDAKGLGIKEATVHPRVSECIGDI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
D+I+ + N AY V+G+V++ V K +YG+LS + ++ +G RV V+ K +P DFA
Sbjct: 121 IDLISDLEKNGYAYNVDGNVYYRVSKFKDYGKLSKKPIDELISGARVEVNDEKESPLDFA 180
Query: 199 LWKAAKA-GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K E ++DSPWG GRPGWHIECSAMS YL S DIHGGG DLIFPHHENEIAQ
Sbjct: 181 LWKKQKEDSEIAFDSPWGKGRPGWHIECSAMSRKYLGSTIDIHGGGEDLIFPHHENEIAQ 240
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V Y++HNG++ NNEKMSKS GNFF +R I++ + +R F++SAHY++P
Sbjct: 241 SEGANGKDFVHYFVHNGYININNEKMSKSKGNFFMVRDISKDFDLEVVRLFMLSAHYKTP 300
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFH 374
+N+S L + +Y T ++ L + K + ++ IN L R+EF
Sbjct: 301 VNFSFDILKQTQSGLNRLYNTKENLLYLL----DKAKDKDLKEDEKEFINSLPKYREEFK 356
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M DD+NT++ ++ + D K INS++N K+ + + L +
Sbjct: 357 NAMEDDINTANAVSTIY-DLSKDINSNVNENSSKEMIMKSYEMYMELNG----------V 405
Query: 435 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 494
LGLL E+L E+++++LIE+R ARKNKDF+ +D+IR DL K
Sbjct: 406 LGLLTKEKEDEIL--------------EDEIIELIEKRQNARKNKDFALADKIRDDLLDK 451
Query: 495 GIALMDMGKETIW 507
GI L D + W
Sbjct: 452 GIVLEDTREGVKW 464
>gi|421838079|ref|ZP_16272066.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001627]
gi|409739613|gb|EKN40247.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001627]
Length = 465
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 295/491 (60%), Gaps = 29/491 (5%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F +VPG+V MYVCG T Y+ H+G+AR V FD + RYLE+ +V
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+++NFTD+DDK+I+RAN+ G L +R+ +EY D DL T PR ++ ME+I
Sbjct: 61 KFIQNFTDIDDKMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++ +I AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA
Sbjct: 121 IKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS
Sbjct: 181 IWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A YW+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +
Sbjct: 241 EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARM 377
N+S+ LDS A+ +Y ++ + E L + E + + E + K ++++ +M
Sbjct: 301 NFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKM 358
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT+ ++ F D ++ +N+++ + K+ + L LI +E+ LG+
Sbjct: 359 DDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGSPLGI 407
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L + + ++++ +R + ARK K+++ +D+IR +L +GI
Sbjct: 408 LQESTKASLEEEIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIV 452
Query: 498 LMDMGKETIWR 508
L D + W+
Sbjct: 453 LEDTPQGVRWK 463
>gi|377579972|ref|ZP_09808928.1| cysteinyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
gi|377538721|dbj|GAB54093.1| cysteinyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
Length = 461
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/493 (44%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDNEPRATQHIPEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV FAV+ +YG+LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEIVEQLIARGHAYVASNGDVMFAVDTDASYGQLSRQDLDQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y P +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDPETIRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ +V AR A M
Sbjct: 302 LNYSEENLKQARSALERLYIALRGTDVNAQAAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F D + +N L + K Q L LRK+ +LGL
Sbjct: 347 DDDFNTPEAYSVLF-DMAREVN-RLKSVDKGAADQ----LASHLRKLAG-------VLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D + E LI++R ARK KD++ +D R L G
Sbjct: 394 LEHDPEQFLQNGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLNEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDGPQGTIWR 459
>gi|307131980|ref|YP_003883996.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
gi|306529509|gb|ADM99439.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
Length = 461
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 277/493 (56%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI GK+GMYVCG+T YDL H+GH R V+FD++ RYL +L +V
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RA + GE L++R E D L P +PR + ++ +I
Sbjct: 62 KYVRNITDIDDKIIKRATENGETITQLTDRMIGEMHTDFDALNIQRPDEEPRATHYIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+++ Q+I AYV GDV F+V+ +P YG LS Q LE +AG RV + KRNP DF
Sbjct: 122 IELVEQLIARRHAYVANNGDVMFSVDTAPGYGALSRQDLEQLKAGARVEITEVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +KAGEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH G V + EKMSKSL NFFT+R + Y +R+FLIS HYRS
Sbjct: 242 STCAHGGEYVNYWMHTGMVMVDREKMSKSLNNFFTMRDVLMHYDAETIRYFLISGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNY+ L A ++ +Y L+ + A S +R A M
Sbjct: 302 LNYTEENLKQARASLERLYTALRGTDAAASAAGGDAFESRFRDA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + R + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REVNRLKAEDAAAANGLAAALRR--------LAGVLGL 393
Query: 438 LP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P + + Q D ++ E LI++R AR++KD++ +D R LT G
Sbjct: 394 LEQDPELFLQSGAQADDGEVQEIE-------ALIKQRNDARQSKDWALADAARNRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + TIWR
Sbjct: 447 IVLEDGPQGTIWR 459
>gi|86157699|ref|YP_464484.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|109894880|sp|Q2IQG7.1|SYC_ANADE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|85774210|gb|ABC81047.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 481
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/499 (43%), Positives = 304/499 (60%), Gaps = 27/499 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+++++++++T QK P+ PGK+ +YVCG T YD SHLGHAR V +D++ R+L
Sbjct: 1 MSIQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGL 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV +VRNFTDVDDKII+RAN+ GE+P++L++R+ + DM L L P +PRVS H+
Sbjct: 61 EVRFVRNFTDVDDKIIQRANERGEDPIALASRFADAFHEDMDALGNLRPDVEPRVSGHIP 120
Query: 137 QIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPA 195
+I +I +++ AY GDV++AV K P YGRLS + L++ AG RV KR+P
Sbjct: 121 EIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGEAKRDPL 180
Query: 196 DFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEI 255
DFALWKAAK GEP+WDSPWG GRPGWHIECSAM+ +L + D+H GG DL+FPHH NEI
Sbjct: 181 DFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFPHHTNEI 240
Query: 256 AQSCAACQDS-----NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLI 310
AQS AA D YWMHNG V ++EKMSKSLGNFFTIR + R+ ALR FL+
Sbjct: 241 AQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLARFDGEALRFFLL 300
Query: 311 SAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-INKL 369
HYR N+S L A + +Y+T++ E A + P AE + +
Sbjct: 301 GTHYRRDFNFSDQVLAEAERRLSALYETVEKAERL---------GAGVEPGAEPAFVERA 351
Query: 370 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 429
R A + DD NT +L G +A N+ + KK P+++ + + + + V
Sbjct: 352 R----AALDDDFNTPQVL-GIVAEAFTEANALADRKGKKSPEEK--ARLAAFARGARAVG 404
Query: 430 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 489
VL ILG P ++ L ++D+A R + +V +LI ERAAAR KDF++SD IR
Sbjct: 405 AVLGILGRPP----AQALSAIRDRAAARRGIDGSEVERLIAERAAARAAKDFARSDAIRD 460
Query: 490 DLTRKGIALMDMGKETIWR 508
L +G+ LMD + T W+
Sbjct: 461 GLLARGVVLMDGPQGTTWK 479
>gi|374298149|ref|YP_005048340.1| cysteinyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
gi|359827643|gb|AEV70416.1| cysteinyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
Length = 467
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 296/493 (60%), Gaps = 31/493 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+KIYN++T++KE F P+ +V MY CG T Y+ H+G+AR + FD + RYLE+ +V
Sbjct: 1 MKIYNTLTRKKEEFVPLDEKEVKMYSCGPTVYNYFHIGNARPFIIFDTVRRYLEYKGYKV 60
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
+V+NFTD+DDK+I+RAN+ G L+ ++ EY +D L T P+ +++++ I
Sbjct: 61 KFVQNFTDIDDKMIKRANEEGITVKELAEKFINEYFIDAEGLGIGKATVHPKATENIDAI 120
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
++I ++ + Y V+GDV+F+ +K YG+LS Q L++ G R+ VD RK++P DFA
Sbjct: 121 IELIKKLEDKGFVYNVDGDVYFSTKKFKEYGKLSHQSLDDLELGARIDVDERKQDPMDFA 180
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
+WKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQS
Sbjct: 181 VWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
AA YWMHNG + +N+KMSKS GNFFT+R+I +++ +R F++SAHYRSP+
Sbjct: 241 EAATGKPFARYWMHNGFINVDNKKMSKSEGNFFTVREIAQKFDYEVIRFFMLSAHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHA 375
N+S+ L+ A +++ IY +C L +EH + ++ ++ NK L+ +F
Sbjct: 301 NFSLELLEQAQNSLERIY----NCIDNLLYLREHAEDREMSEVEKEFQNKLLGLKGKFIE 356
Query: 376 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 435
M DD+NT+ + F D +K +NS++ K S R I + ++R L
Sbjct: 357 AMDDDINTADAIAAIF-DIVKEVNSNITANSK------------SSRAIIDFSHSLIREL 403
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G G +Q +DK + ++ +LI R ARK K++ +D+IR L G
Sbjct: 404 G----GVLGIAQKQKEDK-------LDSEIEELINLRQQARKEKNWKLADEIRDKLKDMG 452
Query: 496 IALMDMGKETIWR 508
I L D + W+
Sbjct: 453 IVLEDTPQGVKWK 465
>gi|365175135|ref|ZP_09362573.1| cysteine-tRNA ligase [Synergistes sp. 3_1_syn1]
gi|363614000|gb|EHL65505.1| cysteine-tRNA ligase [Synergistes sp. 3_1_syn1]
Length = 468
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/493 (42%), Positives = 289/493 (58%), Gaps = 29/493 (5%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+ L +YN +T+ KE F P+ GKV YVCG T Y+ H+G+AR V FD+ RYLE L
Sbjct: 1 MALAVYNDLTRTKEKFIPLEEGKVRFYVCGPTVYNFFHIGNARPFVLFDVFRRYLESLGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
EV YV+NFTD+DDK+I+RAN+ G L+ R+ EY D L T PR + +
Sbjct: 61 EVKYVQNFTDIDDKMIKRANEDGITVAELAERFIAEYYKDADALGIRRATVNPRATHEIA 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I ++I +I AY V+GDV+F+V YG+LS Q ++ +G R+ VD RK+ P D
Sbjct: 121 AIIEIIEALIEKGHAYEVDGDVYFSVASFSEYGKLSKQSVDELLSGARIDVDERKQQPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWK+AK GEP+WDSPWGPGRPGWHIECSAMS YL DIHGGG DLIFPHHENEIA
Sbjct: 181 FALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSTKYLGKTIDIHGGGSDLIFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A V YW+HN ++ + EKMSKSLGNF T+R ++++ +PL LR FL S HYRS
Sbjct: 241 QSECANNAQFVKYWLHNAYLLIDKEKMSKSLGNFLTVRDVSQKVNPLVLRFFLASVHYRS 300
Query: 317 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
PLN+S L+ A A+ + L +C + E+ + A + + F A
Sbjct: 301 PLNFSPEGLEQAKAAL----ERLNNCYADMLFALENRAAGEADEALRAAVKGSEEGFTAA 356
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL-RKIENEVKEVLRIL 435
M DD NT+ + G + ++ +N +++ + ++ ++ L+ ++L K +N IL
Sbjct: 357 MDDDFNTAGAV-GCIFEMVRAVN--VHLTEHQEIDKEALTEAKALFEKTDN-------IL 406
Query: 436 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
G L Y E K A E ++ L+ ER ARK K+F +SD+IR L KG
Sbjct: 407 GYL----YEE----------KEAGDEESEIDALVAERTEARKAKNFKRSDEIRDLLAAKG 452
Query: 496 IALMDMGKETIWR 508
+ + D + W+
Sbjct: 453 VVIEDTPQGPRWK 465
>gi|401674819|ref|ZP_10806816.1| cysteinyl-tRNA synthetase [Enterobacter sp. SST3]
gi|400217834|gb|EJO48723.1| cysteinyl-tRNA synthetase [Enterobacter sp. SST3]
Length = 461
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/493 (45%), Positives = 284/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N+MT+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ ++I AYV + GDV F+V P YG LS Q L+ +AG RV V KRNP DF
Sbjct: 122 IEITEKLIARGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGDGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ T R PAA + R F M
Sbjct: 302 LNYSEENLKQARSALERLYTALR-------------GTDRSVPAAGGEAFEAR--FVEVM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + +L LRK+ +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKSEDMAAAN-ALASHLRKLSA-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI+ R AR+ KD++ +D R LT G
Sbjct: 394 LEQEPDAFLQSGAQADDGEVAEIE-------ALIKARLEARQAKDWAAADAARNRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|445496217|ref|ZP_21463261.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
gi|444792378|gb|ELX13925.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
Length = 463
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/500 (43%), Positives = 285/500 (57%), Gaps = 52/500 (10%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKIYN++ + K+ F PI GKV MYVCG+T YD H+GHAR ++FD++YR+L EV
Sbjct: 4 LKIYNTLARDKQTFVPIEAGKVRMYVCGMTIYDYCHIGHARMMMAFDVMYRWLLASGYEV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
TY RN TD+DDKII+RA + GE L+ R+ Q D L LP T PR ++++ Q+
Sbjct: 64 TYARNITDIDDKIIKRAVENGETISQLTTRFTQYMDEDTGALGILPATLVPRATEYVPQM 123
Query: 139 KDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I + + D AY +GDV +AV PNYGRLSG+ L++ RAGERV V++ KR+P DF
Sbjct: 124 LALIETLESKDLAYQGSDGDVNYAVRNFPNYGRLSGKSLDDLRAGERVDVNTGKRDPLDF 183
Query: 198 ALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENE 254
LWKA+K EP WDS WG GRPGWHIECSAM + L FDIHGGG DL FPHHENE
Sbjct: 184 VLWKASKESEPDEVKWDSKWGKGRPGWHIECSAMCSALLGEHFDIHGGGADLQFPHHENE 243
Query: 255 IAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHY 314
IAQS A + V+YW+HNG V +NEKMSKSLGNFFTIR + ++Y +R F++ AHY
Sbjct: 244 IAQSEGAFGRTMVNYWVHNGFVRVDNEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAHY 303
Query: 315 RSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAEDCINKLRD 371
RSPLNYS LD A A+ +Y L E +AL + H
Sbjct: 304 RSPLNYSDAHLDDARVALTRLYTALDGVEGDGLALDWQEPHAA----------------- 346
Query: 372 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 431
F M DD NT L F + S LN K K P + ++K +
Sbjct: 347 RFAEAMDDDFNTPVALAVLFD-----LVSELN--KSKSP------------AVARQLKAL 387
Query: 432 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA--ARKNKDFSKSDQIRA 489
++GLL + Q+ + A+ + T+ D A+K ++F++SD+IRA
Sbjct: 388 AGVIGLL-----ARTPQEFRQAAVGETD-TDGDAAIAARIAQRIEAKKARNFAESDKIRA 441
Query: 490 DLTRKGIALMDMGKETI-WR 508
DL GI L D T WR
Sbjct: 442 DLLTAGIILEDKPDGTTNWR 461
>gi|407793853|ref|ZP_11140884.1| cysteinyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
gi|407214007|gb|EKE83858.1| cysteinyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
Length = 465
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/497 (44%), Positives = 289/497 (58%), Gaps = 42/497 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L ++N++T+QKE F PI G+V +YVCGVT YD H+GHAR VSFD++ RYL + +V
Sbjct: 2 LTLFNTLTRQKEAFKPIHEGQVNLYVCGVTIYDFCHIGHARTYVSFDVVVRYLRAIGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKIIRRAN+ G+ ++ + D A L L P +P V+DHM+ I
Sbjct: 62 KYVRNITDVDDKIIRRANESGQQIGDITRHFAAAMHEDFAALNLLEPDVEPTVTDHMDDI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
MI +I AYV + GDV F V +YG+LS Q L +AG RV VD+ K +P DF
Sbjct: 122 IAMIAALIEKGAAYVADNGDVLFDVSTFNDYGKLSKQDLSQLQAGARVDVDNSKADPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK AKAGEPSW SPWG GRPGWHIECSAM+ +L S FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 VLWKPAKAGEPSWPSPWGAGRPGWHIECSAMNKKHLGSHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A + V+YWMH+G V ++ KMSKSLGNFFTIR + +Y +R+FL+S+HYRS
Sbjct: 242 SCCANDSAYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLSQYSAETVRYFLLSSHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA---EDCINKLRDEFH 374
L+Y+ L A ++ +Y TL+D I PA E ++ F
Sbjct: 302 LSYTSDNLQQAHASLERLYGTLRD----------------IAPAEALDETLYDRYWQRFC 345
Query: 375 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 434
M+DD N F+ A S M K+Q + L+ L + +K + +
Sbjct: 346 QAMNDDFNVPEATPLLFELA----RDSQRM--KQQGDAESLAQAAQLTAV---MKRLAAV 396
Query: 435 LGLL--PPGAYSEVLQQLKDKA-LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 491
LGLL P A+ LQ +D A + R E LI +R AR NKD++ +D R L
Sbjct: 397 LGLLQQAPEAF---LQGQQDAAEVARIE-------ALIAQRENARANKDWAAADAARDQL 446
Query: 492 TRKGIALMDMGKETIWR 508
T G+ L D T WR
Sbjct: 447 TELGVVLEDGAGGTRWR 463
>gi|290968519|ref|ZP_06560058.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290781515|gb|EFD94104.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 481
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/492 (42%), Positives = 294/492 (59%), Gaps = 17/492 (3%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L +YN++T++KE F P+ PG+V MYVCG+T Y+ SH+G+AR V++D++ RYLEHL V
Sbjct: 4 LYVYNTLTRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAV 63
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
T+++NFTDVDDKII AN +++NRY Y M L PRVS+HM +I
Sbjct: 64 THIQNFTDVDDKIIHAANGEQVRWDTIANRYIASYFDVMDALHVRHADIYPRVSEHMPEI 123
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
MI +++ AYVVE DV+++VEK +YG+LSG+ L++ +AG R+ VD+RK +P DFA
Sbjct: 124 IQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVDTRKHHPMDFA 183
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK AK GEPSW+SPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQS
Sbjct: 184 LWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIFPHHENEIAQS 243
Query: 259 CAACQDS-NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
A S V YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R FLIS HYRSP
Sbjct: 244 EACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYDPDAVRFFLISNHYRSP 303
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 376
L+++ +L+ + ++ + ++ + E+A P G + A ++ ++F
Sbjct: 304 LDFTDARLEEMTRSLERLRTSIMNVLELATMP---AGGKSAEAAALLTEAQQVAEDFETA 360
Query: 377 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 436
M DD NT+ F+ A K ++ P S+I +++I + ++L IL
Sbjct: 361 MCDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDT--SVITEVKRIFKMMTDILGILE 418
Query: 437 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 496
G S A + A L E ++E R R+ K + +D IR L GI
Sbjct: 419 SAWNGQTSSA------DASEYAALVE----AVLEIRKECREKKQYELADAIRDKLQALGI 468
Query: 497 ALMDMGKETIWR 508
+ D + W+
Sbjct: 469 TIEDSPQGARWK 480
>gi|269140042|ref|YP_003296743.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|387868556|ref|YP_005700025.1| cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
gi|267985703|gb|ACY85532.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|304559869|gb|ADM42533.1| Cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
Length = 461
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/495 (43%), Positives = 280/495 (56%), Gaps = 42/495 (8%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++++QKE F PI G+VGMYVCGVT YDL H+GH R V FD++ RYL +L +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYRL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA + E+ L+ R E D L P +PR + H+ +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENKESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ Q+I D AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF
Sbjct: 122 IALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVADVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A + V+YWMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A A+ +Y L+ + A P + TAR F A M
Sbjct: 302 LNYSEENLKQARAALERLYTALRGTDAAAQPAADETFTAR---------------FRAAM 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
DD NT + F A +N LK + Q + +++ + +LGL
Sbjct: 347 DDDFNTPEAYSVLFDMA-----REINRLKGEDMAQAS--------ALAAQMRGLAHVLGL 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEED----VLQLIEERAAARKNKDFSKSDQIRADLTR 493
L+Q + L+ +D + LI++R AR K ++ +D+ R L
Sbjct: 394 ---------LEQTPEHFLQSGAAAGDDEVAQIEALIKQRNDARAAKAWALADEARDSLNA 444
Query: 494 KGIALMDMGKETIWR 508
GI L D + T WR
Sbjct: 445 MGIVLEDGPQGTTWR 459
>gi|381394421|ref|ZP_09920138.1| cysteinyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330023|dbj|GAB55271.1| cysteinyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 459
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/491 (43%), Positives = 280/491 (57%), Gaps = 36/491 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
L+IYN+++++K+ FTPIV KVG+YVCG+T YDL H+GHAR +SFD++ RYL HL EV
Sbjct: 2 LQIYNTLSKEKQPFTPIVKNKVGLYVCGITVYDLCHMGHARTYLSFDIVLRYLRHLGFEV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TDVDDKII+RA E P L+ R E D A L L P +PRV+ HM +I
Sbjct: 62 KYVRNITDVDDKIIQRAQQNNETPGELTQRTITEMHADFAALNLLKPDVEPRVTTHMPEI 121
Query: 139 KDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
+I ++I+ AY GDV F V YG+LS Q L +G RV S K +P DF
Sbjct: 122 ITVIERLIDKGYAYQSSTGDVLFKVNAYEGYGKLSKQDLSQLVSGIRVQTTSDKHDPLDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK K GE SW SPWG GRPGWHIECSAM+ +L FDIHGGG DLIFPHHENE+AQ
Sbjct: 182 ILWKGVKEGEISWASPWGEGRPGWHIECSAMNHKHLGEHFDIHGGGSDLIFPHHENEVAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
SC A V+ WMH G V NNEKMSKSL NFFT+R + E++ LR FL+SAHYRS
Sbjct: 242 SCCAYDTPYVNTWMHTGMVQINNEKMSKSLDNFFTLRSVLEKHDAETLRFFLMSAHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
L+YS +D A ++ Y +L+D + N E +F A M
Sbjct: 302 LSYSQENIDQARASLERFYTSLRDV--------------KANVDVEMSYGGYLAKFEAAM 347
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD N + F I LN L + + + ++ + +ILG+
Sbjct: 348 NDDFNMPVAVAVLFD-----IVKDLNKLDSNSDEAKDTA---------GALRHLGKILGI 393
Query: 438 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 497
L +E Q L+ + +LT + + LI +R AR +K+++ +D IR +L+ G+
Sbjct: 394 LE----NEPEQFLQGDLSQ--DLTAQ-IEALIAKRIQARTDKNWASADAIRDELSALGVI 446
Query: 498 LMDMGKETIWR 508
L + T WR
Sbjct: 447 LEESKTGTTWR 457
>gi|423138995|ref|ZP_17126633.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379051549|gb|EHY69440.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 461
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/493 (44%), Positives = 285/493 (57%), Gaps = 38/493 (7%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
LKI+N++T+QKE F PI G+VGMYVCG+T YDL H+GH R V+FD++ RYL L ++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
YVRN TD+DDKII+RAN+ GE+ ++L +R E D L L P +PR + H+++I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHRDFDALNILRPDSEPRATHHIQEI 121
Query: 139 KDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADF 197
++ +I AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF
Sbjct: 122 IEITRILIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDF 181
Query: 198 ALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ 257
LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQ
Sbjct: 182 VLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQ 241
Query: 258 SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 317
S A V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS
Sbjct: 242 STCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQ 301
Query: 318 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 377
LNYS L A ++ +Y L+ + + +P AR A M
Sbjct: 302 LNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA---------------M 346
Query: 378 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 437
+DD NT + F A +N LK + ++ LRKI +LGL
Sbjct: 347 NDDFNTPEAYSVLFDMA-----REVNRLKGEDMTAAN-AMASHLRKISG-------VLGL 393
Query: 438 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 495
L P A+ + Q D + E LI++R ARK KD++ +D R LT G
Sbjct: 394 LEQEPDAFLQSGAQADDGEVAEIE-------ALIQQRLDARKAKDWAAADAARDRLTEMG 446
Query: 496 IALMDMGKETIWR 508
I L D + T WR
Sbjct: 447 IILEDGPQGTTWR 459
>gi|385800588|ref|YP_005836992.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 483
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 300/497 (60%), Gaps = 31/497 (6%)
Query: 19 LKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKCEV 78
+K+YN++T +KE F P+ KV MYVCG+T + SH+GH R+ +++D++ R+LE+L +V
Sbjct: 2 IKVYNTLTGEKEEFKPVEKDKVKMYVCGLTVQNYSHIGHIRSVINYDVIRRFLEYLGYQV 61
Query: 79 TYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQI 138
Y+ NFTD+++KI++RA + P +L+N+Y +L D+ + P RVS+++ +I
Sbjct: 62 DYISNFTDINEKIVQRAAEEDLKPAALANKYANAFLEDLREFNVKPADKYLRVSENVAEI 121
Query: 139 KDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFA 198
+M+T +I AY V G+V+F+VE +YG+LSG+ L+ +AG R+AV+ KRNP DF
Sbjct: 122 IEMVTTLIEKGYAYEVNGNVYFSVESFADYGKLSGRNLDEMQAGARIAVNKEKRNPLDFG 181
Query: 199 LWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS 258
LWK ++ E WDSPWG G PGWHIECSAMS L S FDIHGGG+DLIFPHHENEIAQS
Sbjct: 182 LWKKVES-ETGWDSPWGEGWPGWHIECSAMSMKRLGSTFDIHGGGVDLIFPHHENEIAQS 240
Query: 259 CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPL 318
A V+YW+HNG V + EKMSKS GNFFT R++ + + +R+FL++ HYRSP+
Sbjct: 241 EAYSDQKFVNYWLHNGTVNLSGEKMSKSQGNFFTSREVLKEFSAEVVRYFLLTRHYRSPI 300
Query: 319 NYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------LR 370
++S +L+ A+ ++ I T + LS IN AAE+ I + +
Sbjct: 301 DFSYEKLEEAATSLTRIKNTRKQLAKVLS--------LDINSAAENKIEQEFFENIISKK 352
Query: 371 DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKE 430
EF A + DD NT+ + G D INS +N K+ ++ +L+ KI E
Sbjct: 353 KEFIAALKDDFNTAEAI-GVIHDLAGEINSYINR-KEFDLNEKNFALLTKTEKI---FLE 407
Query: 431 VLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 490
++ ILGL +L+ + +EL V LI+ R AR+NK++ ++D IR
Sbjct: 408 LIEILGLEF---------KLESASESESELVSPLVNLLIKLRNKARENKNWQEADLIRDQ 458
Query: 491 LTRKGIALMDMGKETIW 507
L GI ++D T W
Sbjct: 459 LEEIGIEVIDSPHGTEW 475
>gi|206972194|ref|ZP_03233141.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
gi|206732768|gb|EDZ49943.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
Length = 465
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/495 (41%), Positives = 297/495 (60%), Gaps = 35/495 (7%)
Query: 17 LTLKIYNSMTQQKELFTPIVPGKVGMYVCGVTAYDLSHLGHARAAVSFDLLYRYLEHLKC 76
+T+ IYN++T+QKE F P+ KV MYVCG T Y+ H+G+AR + FD + RYLE+
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 77 EVTYVRNFTDVDDKIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHME 136
+V YV NFTDVDDK+I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+
Sbjct: 61 DVQYVSNFTDVDDKLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMD 120
Query: 137 QIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPAD 196
I + I +++N AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P D
Sbjct: 121 IIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLD 180
Query: 197 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 256
FALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIA
Sbjct: 181 FALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIA 240
Query: 257 QSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 316
QS A + YWMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR
Sbjct: 241 QSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRH 300
Query: 317 PLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 373
P+N+S L S ++ + I Y L+ + + +H N I K + F
Sbjct: 301 PINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDH------NEKWLSEIEKFQTAF 354
Query: 374 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 433
M+DD NT++ +T + A N + L ++ + +IE+ K +++ +
Sbjct: 355 EEAMNDDFNTANAITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFD 404
Query: 434 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 493
ILGL L + EL +E++ +LI++R ARKN+DF+ SDQIR DL
Sbjct: 405 ILGL----------------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKE 448
Query: 494 KGIALMDMGKETIWR 508
+ I L D + T W+
Sbjct: 449 RNIILEDTAQGTRWK 463
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,340,433,072
Number of Sequences: 23463169
Number of extensions: 349990296
Number of successful extensions: 1047851
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5988
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 1021936
Number of HSP's gapped (non-prelim): 7597
length of query: 537
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 389
effective length of database: 8,886,646,355
effective search space: 3456905432095
effective search space used: 3456905432095
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)