Query 009330
Match_columns 537
No_of_seqs 220 out of 471
Neff 4.5
Searched_HMMs 29240
Date Tue Mar 26 00:03:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009330.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009330hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ix7_C Myosin-5A; contractIle 98.7 1.5E-08 5.3E-13 78.7 6.4 53 154-207 3-56 (58)
2 1n2d_C IQ2 and IQ3 motifs from 98.3 5.5E-07 1.9E-11 67.3 5.5 41 157-197 4-47 (48)
3 2dfs_A Myosin-5A; myosin-V, in 98.3 9.1E-07 3.1E-11 103.2 8.0 66 155-221 815-881 (1080)
4 2dfs_A Myosin-5A; myosin-V, in 98.3 1.3E-06 4.5E-11 101.8 9.2 66 156-222 768-834 (1080)
5 2l53_B CAM, voltage-gated sodi 97.8 8.3E-06 2.8E-10 57.0 2.2 23 154-176 4-26 (31)
6 2kxw_B Sodium channel protein 97.7 1.4E-05 4.8E-10 54.2 2.0 21 154-174 4-24 (27)
7 1n2d_C IQ2 and IQ3 motifs from 97.3 0.00039 1.3E-08 51.6 5.9 43 178-221 3-45 (48)
8 1wdc_A Scallop myosin; calcium 96.3 0.0048 1.6E-07 48.7 5.3 40 157-196 7-50 (64)
9 3gn4_A Myosin-VI; unconvention 96.3 0.003 1E-07 58.5 4.5 38 153-190 42-80 (148)
10 2bl0_A Major plasmodial myosin 96.2 0.0046 1.6E-07 48.7 4.7 39 157-195 5-47 (63)
11 2ix7_C Myosin-5A; contractIle 95.9 0.012 4.1E-07 45.3 5.4 40 179-221 6-45 (58)
12 1kk8_A Myosin heavy chain, str 95.5 0.011 3.8E-07 67.6 5.4 42 156-197 779-824 (837)
13 1wdc_A Scallop myosin; calcium 94.9 0.043 1.5E-06 43.1 5.6 42 179-220 7-48 (64)
14 2bl0_A Major plasmodial myosin 94.8 0.041 1.4E-06 43.2 5.3 43 179-221 5-47 (63)
15 1i84_S Smooth muscle myosin he 92.9 0.078 2.7E-06 62.4 5.3 41 157-197 793-837 (1184)
16 4dck_A Sodium channel protein 90.4 0.15 5E-06 48.1 3.2 24 153-176 127-150 (168)
17 1kk8_A Myosin heavy chain, str 83.7 1.6 5.6E-05 50.0 7.2 43 178-220 779-821 (837)
18 1w7j_A Myosin VA; motor protei 79.8 1 3.4E-05 51.4 3.6 24 156-179 768-791 (795)
19 1i84_S Smooth muscle myosin he 71.9 5.3 0.00018 47.1 7.0 42 179-220 793-834 (1184)
20 4anj_A Unconventional myosin-V 69.0 4.5 0.00015 47.5 5.4 34 156-190 775-809 (1052)
21 3gn4_A Myosin-VI; unconvention 38.5 49 0.0017 30.5 5.8 31 179-212 46-76 (148)
22 2f3y_B Voltage-dependent L-typ 25.7 41 0.0014 22.5 2.1 19 157-175 3-21 (26)
23 2be6_D Voltage-dependent L-typ 23.6 56 0.0019 23.5 2.7 21 155-175 10-30 (37)
24 3dvk_B Voltage-dependent R-typ 20.2 40 0.0014 22.0 1.3 19 155-173 5-23 (23)
No 1
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.74 E-value=1.5e-08 Score=78.73 Aligned_cols=53 Identities=19% Similarity=0.345 Sum_probs=45.7
Q ss_pred chhhHHHHHHHHHhhHHHHHHHH-HHhhHHHHHHHhhhhhhhhhhHHHHHHHHHH
Q 009330 154 YRHASATKIQAAYRGYMARRSFR-ALKGLVRLQGVVRGQNVKRQTTNAMKYMQLL 207 (537)
Q Consensus 154 ~ee~AAI~IQsAfRGylARR~lr-alkglVrLQalvRG~~VRrQa~~tlr~mqa~ 207 (537)
..+.|||.||+.||||++|+.|. ...++|.||+.+||+++|+.+ ..++...++
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~~r~~~aA 56 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA-KFLRRTKAA 56 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCc
Confidence 46789999999999999999999 555999999999999999998 556665554
No 2
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.35 E-value=5.5e-07 Score=67.30 Aligned_cols=41 Identities=17% Similarity=0.330 Sum_probs=34.1
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHh---hHHHHHHHhhhhhhhhhh
Q 009330 157 ASATKIQAAYRGYMARRSFRALK---GLVRLQGVVRGQNVKRQT 197 (537)
Q Consensus 157 ~AAI~IQsAfRGylARR~lralk---glVrLQalvRG~~VRrQa 197 (537)
.|||.||+.+|||++|+.+..++ ..|.||+.+||+.+|+..
T Consensus 4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 58999999999999999988433 778888888888888764
No 3
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.28 E-value=9.1e-07 Score=103.16 Aligned_cols=66 Identities=21% Similarity=0.309 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHHhhHHHHHHHH-HHhhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009330 155 RHASATKIQAAYRGYMARRSFR-ALKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRRIQM 221 (537)
Q Consensus 155 ee~AAI~IQsAfRGylARR~lr-alkglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs~iR~rr~R~ 221 (537)
++.||++||+.||||++|+.|. .+.++|.||+.+||..+|+++ ..++...+++.||+.+|++..|.
T Consensus 815 ~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~-~~lr~~~aav~IQ~~~Rg~l~R~ 881 (1080)
T 2dfs_A 815 RTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKY-QMMLREHKSIIIQKHVRGWLARV 881 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTTHHHH
T ss_pred cchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777788888888888777 566777788888888888777 44555667777777777777664
No 4
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.27 E-value=1.3e-06 Score=101.84 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHhhHHHHHHHH-HHhhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009330 156 HASATKIQAAYRGYMARRSFR-ALKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRRIQML 222 (537)
Q Consensus 156 e~AAI~IQsAfRGylARR~lr-alkglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs~iR~rr~R~s 222 (537)
..||+.||++||||++|+.|+ ...+++.||+.+||+.+|+.+ ..++...|++.||+.+|++.+|..
T Consensus 768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~ 834 (1080)
T 2dfs_A 768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKR 834 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHH
Confidence 579999999999999999999 667899999999999999998 667888999999999999998854
No 5
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=97.79 E-value=8.3e-06 Score=57.04 Aligned_cols=23 Identities=35% Similarity=0.452 Sum_probs=21.0
Q ss_pred chhhHHHHHHHHHhhHHHHHHHH
Q 009330 154 YRHASATKIQAAYRGYMARRSFR 176 (537)
Q Consensus 154 ~ee~AAI~IQsAfRGylARR~lr 176 (537)
.||.||+.||.|||+||.|+.+.
T Consensus 4 ~Ee~aA~vIQrA~R~yl~rr~~~ 26 (31)
T 2l53_B 4 SEEVSAMVIQRAFRRHLLQRSLK 26 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 68999999999999999998754
No 6
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=97.68 E-value=1.4e-05 Score=54.24 Aligned_cols=21 Identities=38% Similarity=0.559 Sum_probs=19.4
Q ss_pred chhhHHHHHHHHHhhHHHHHH
Q 009330 154 YRHASATKIQAAYRGYMARRS 174 (537)
Q Consensus 154 ~ee~AAI~IQsAfRGylARR~ 174 (537)
.||.||+.||.|||+||+++.
T Consensus 4 ~Ee~aA~vIQrA~R~yl~~~~ 24 (27)
T 2kxw_B 4 QEEVSAIVIQRAYRRYLLKQK 24 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 689999999999999999874
No 7
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00039 Score=51.64 Aligned_cols=43 Identities=14% Similarity=0.212 Sum_probs=37.7
Q ss_pred HhhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009330 178 LKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRRIQM 221 (537)
Q Consensus 178 lkglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs~iR~rr~R~ 221 (537)
.+.+|.||+.+||.++|+++ ..++...+++.||+.+|++.+|.
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk 45 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRA 45 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHH
Confidence 35789999999999999999 56777789999999999998773
No 8
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.35 E-value=0.0048 Score=48.67 Aligned_cols=40 Identities=30% Similarity=0.434 Sum_probs=23.9
Q ss_pred hHHHHHHHHHhhHHHHHHHHH----HhhHHHHHHHhhhhhhhhh
Q 009330 157 ASATKIQAAYRGYMARRSFRA----LKGLVRLQGVVRGQNVKRQ 196 (537)
Q Consensus 157 ~AAI~IQsAfRGylARR~lra----lkglVrLQalvRG~~VRrQ 196 (537)
..++.||+.+||||+|+.|.. ..++.-||.-+|+.+..+.
T Consensus 7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~ 50 (64)
T 1wdc_A 7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 50 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 457778888888888887762 2344344555555544443
No 9
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=96.32 E-value=0.003 Score=58.45 Aligned_cols=38 Identities=24% Similarity=0.550 Sum_probs=33.1
Q ss_pred cchhhHHHHHHHHHhhHHHHHHHH-HHhhHHHHHHHhhh
Q 009330 153 RYRHASATKIQAAYRGYMARRSFR-ALKGLVRLQGVVRG 190 (537)
Q Consensus 153 ~~ee~AAI~IQsAfRGylARR~lr-alkglVrLQalvRG 190 (537)
.++..|+|+||+++||||+|+.++ .+.|++++.+|..-
T Consensus 42 ~yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~~~ 80 (148)
T 3gn4_A 42 KYRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLKKR 80 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 367889999999999999999999 88999998877543
No 10
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.25 E-value=0.0046 Score=48.66 Aligned_cols=39 Identities=26% Similarity=0.312 Sum_probs=22.2
Q ss_pred hHHHHHHHHHhhHHHHHHHHH----HhhHHHHHHHhhhhhhhh
Q 009330 157 ASATKIQAAYRGYMARRSFRA----LKGLVRLQGVVRGQNVKR 195 (537)
Q Consensus 157 ~AAI~IQsAfRGylARR~lra----lkglVrLQalvRG~~VRr 195 (537)
..++.||+.+|||++|+.|.. ..++.-||.-+|+.+.++
T Consensus 5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456777777777777777652 233333444444444443
No 11
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=95.89 E-value=0.012 Score=45.26 Aligned_cols=40 Identities=15% Similarity=0.300 Sum_probs=34.8
Q ss_pred hhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009330 179 KGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRRIQM 221 (537)
Q Consensus 179 kglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs~iR~rr~R~ 221 (537)
..+|.||+.+||+.+|+.+ ++...+++.||+.+|++.+|.
T Consensus 6 ~aai~IQ~~~Rg~~~Rk~~---~~~r~aai~IQ~~~Rg~~aR~ 45 (58)
T 2ix7_C 6 AACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQARC 45 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999 334479999999999998885
No 12
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=95.47 E-value=0.011 Score=67.56 Aligned_cols=42 Identities=31% Similarity=0.434 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHH----hhHHHHHHHhhhhhhhhhh
Q 009330 156 HASATKIQAAYRGYMARRSFRAL----KGLVRLQGVVRGQNVKRQT 197 (537)
Q Consensus 156 e~AAI~IQsAfRGylARR~lral----kglVrLQalvRG~~VRrQa 197 (537)
..+|+.||+++||||+|+.|+.+ .+++.||.-+||++++|+.
T Consensus 779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~ 824 (837)
T 1kk8_A 779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 824 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 34688899999999999988743 5677777777777777665
No 13
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=94.88 E-value=0.043 Score=43.11 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=36.4
Q ss_pred hhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009330 179 KGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRRIQ 220 (537)
Q Consensus 179 kglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs~iR~rr~R 220 (537)
.-++.||+.+||.++|+.+...+...+|+..||..+|++..+
T Consensus 7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l 48 (64)
T 1wdc_A 7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 48 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 457889999999999999987777788888999999998654
No 14
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=94.81 E-value=0.041 Score=43.18 Aligned_cols=43 Identities=14% Similarity=0.014 Sum_probs=36.6
Q ss_pred hhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009330 179 KGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRRIQM 221 (537)
Q Consensus 179 kglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs~iR~rr~R~ 221 (537)
.-++.||+.+||.++|+.+...+...+|+..||..+|++..+.
T Consensus 5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3477899999999999999877777888889999999986543
No 15
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=92.95 E-value=0.078 Score=62.42 Aligned_cols=41 Identities=27% Similarity=0.308 Sum_probs=36.1
Q ss_pred hHHHHHHHHHhhHHHHHHHHHH----hhHHHHHHHhhhhhhhhhh
Q 009330 157 ASATKIQAAYRGYMARRSFRAL----KGLVRLQGVVRGQNVKRQT 197 (537)
Q Consensus 157 ~AAI~IQsAfRGylARR~lral----kglVrLQalvRG~~VRrQa 197 (537)
.+|+.||+.+|||++|+.|..+ .+++.||..+||++.++..
T Consensus 793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~ 837 (1184)
T 1i84_S 793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW 837 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6789999999999999998843 5899999999999988763
No 16
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=90.44 E-value=0.15 Score=48.07 Aligned_cols=24 Identities=33% Similarity=0.466 Sum_probs=21.6
Q ss_pred cchhhHHHHHHHHHhhHHHHHHHH
Q 009330 153 RYRHASATKIQAAYRGYMARRSFR 176 (537)
Q Consensus 153 ~~ee~AAI~IQsAfRGylARR~lr 176 (537)
..|+.||+.||.|||.|+.|+.+.
T Consensus 127 ~~e~~aA~~IQra~R~~~~r~~~~ 150 (168)
T 4dck_A 127 KHEEVSAMVIQRAFRRHLLQRSLK 150 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc
Confidence 368999999999999999998776
No 17
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=83.72 E-value=1.6 Score=49.95 Aligned_cols=43 Identities=16% Similarity=0.127 Sum_probs=35.8
Q ss_pred HhhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009330 178 LKGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRRIQ 220 (537)
Q Consensus 178 lkglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs~iR~rr~R 220 (537)
.+-++.||+.+||.+.|+.+...+....|++.||..+|++..|
T Consensus 779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~ 821 (837)
T 1kk8_A 779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 821 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999965555568999999999999765
No 18
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=79.84 E-value=1 Score=51.40 Aligned_cols=24 Identities=25% Similarity=0.642 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHh
Q 009330 156 HASATKIQAAYRGYMARRSFRALK 179 (537)
Q Consensus 156 e~AAI~IQsAfRGylARR~lralk 179 (537)
..+|++||+++||||+||.|+.++
T Consensus 768 ~~~~~~iQ~~~Rg~l~R~~~~~~r 791 (795)
T 1w7j_A 768 RAACIRIQKTIRGWLMRKKYMRMR 791 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999998554
No 19
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=71.93 E-value=5.3 Score=47.08 Aligned_cols=42 Identities=12% Similarity=0.167 Sum_probs=35.7
Q ss_pred hhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009330 179 KGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQSQIQSRRIQ 220 (537)
Q Consensus 179 kglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs~iR~rr~R 220 (537)
.-++.||+.+||.+.|+.+...++...+++.||+.+|++..+
T Consensus 793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~ 834 (1184)
T 1i84_S 793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNV 834 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999966555678999999999998765
No 20
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=69.00 E-value=4.5 Score=47.51 Aligned_cols=34 Identities=3% Similarity=0.002 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHhhHHHHHHHH-HHhhHHHHHHHhhh
Q 009330 156 HASATKIQAAYRGYMARRSFR-ALKGLVRLQGVVRG 190 (537)
Q Consensus 156 e~AAI~IQsAfRGylARR~lr-alkglVrLQalvRG 190 (537)
+.+|+.||. +||||+|+.|+ .....+.+|.+-|+
T Consensus 775 ~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~ 809 (1052)
T 4anj_A 775 DHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNK 809 (1052)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777774 68888888876 33344444443333
No 21
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=38.50 E-value=49 Score=30.49 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=21.3
Q ss_pred hhHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHH
Q 009330 179 KGLVRLQGVVRGQNVKRQTTNAMKYMQLLVRVQS 212 (537)
Q Consensus 179 kglVrLQalvRG~~VRrQa~~tlr~mqa~vriQs 212 (537)
..+|.+|..|||+++|++.. -++.+++++.+
T Consensus 46 ~~~i~iQktvR~~L~rkkhk---PRi~g~~kv~~ 76 (148)
T 3gn4_A 46 EACIKMQKTIRMWLCKRRHK---PRIDGLVKVGT 76 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHH
Confidence 46777899999999999883 34444544443
No 22
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=25.67 E-value=41 Score=22.52 Aligned_cols=19 Identities=21% Similarity=0.295 Sum_probs=16.2
Q ss_pred hHHHHHHHHHhhHHHHHHH
Q 009330 157 ASATKIQAAYRGYMARRSF 175 (537)
Q Consensus 157 ~AAI~IQsAfRGylARR~l 175 (537)
.|...||-.||.|..|+.-
T Consensus 3 Yat~LIqdyfRkfkkrke~ 21 (26)
T 2f3y_B 3 YATFLIQEYFRKFKKRKEQ 21 (26)
T ss_pred chhhhHHHHHHHHHHhHHh
Confidence 3678999999999998865
No 23
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=23.63 E-value=56 Score=23.55 Aligned_cols=21 Identities=19% Similarity=0.308 Sum_probs=18.0
Q ss_pred hhhHHHHHHHHHhhHHHHHHH
Q 009330 155 RHASATKIQAAYRGYMARRSF 175 (537)
Q Consensus 155 ee~AAI~IQsAfRGylARR~l 175 (537)
+=.|...||-.||.|..|+..
T Consensus 10 KfYatfLIQdyFRkfkkrke~ 30 (37)
T 2be6_D 10 KFYATFLIQEYFRKFKKRKEQ 30 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 456889999999999999865
No 24
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=20.20 E-value=40 Score=22.03 Aligned_cols=19 Identities=16% Similarity=0.212 Sum_probs=15.5
Q ss_pred hhhHHHHHHHHHhhHHHHH...
Q 009330 155 RHASATKIQAAYRGYMARR... 173 (537)
Q Consensus 155 ee~AAI~IQsAfRGylARR... 173 (537)
+--|+..||--||-+..|+
T Consensus 5 KiYA~llI~d~~r~~k~r~... 23 (23)
T 3dvk_B 5 KIYAAMMIMDYYKQSKVKKxxx 26 (26)
T ss_dssp HHHHHHHHHHHHHHHHHTC...
T ss_pred HHHHHHHHHHHHHHHhccC...
Confidence 4568999999999887763
Done!