BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009340
(537 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 169/299 (56%), Gaps = 12/299 (4%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQI 269
+L+ AT+N++ +G G FG VYKG+L DG+ VA+KR I +F E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H H+V L+G C E +L+Y+Y+ +G L H++ S+SWE R+ +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM--------SMSWEQRLEI 144
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTI 388
A + Y+H+ A I HRD+KS NILLD+ F K++DFGIS+ D+THL +
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
+GT GY+DPEYF + T+KSDVYSFGVVL E+L + I + E NL +
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 449 ENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCL 507
QL +I+D +A + R E + + A++CL L+S+ RP+M V +LE R Q +
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 168/299 (56%), Gaps = 12/299 (4%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQI 269
+L+ AT+N++ +G G FG VYKG+L DG+ VA+KR I +F E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H H+V L+G C E +L+Y+Y+ +G L H++ S+SWE R+ +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM--------SMSWEQRLEI 144
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTI 388
A + Y+H+ A I HRD+KS NILLD+ F K++DFGIS+ +THL +
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
+GT GY+DPEYF + T+KSDVYSFGVVL E+L + I + E NL +
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 449 ENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCL 507
QL +I+D +A + R E + + A++CL L+S+ RP+M V +LE R Q +
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 182/309 (58%), Gaps = 13/309 (4%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIH--QFIN 261
K F+ ELQ A+DN++ LG+GGFG VYKG L DG++VAVKR KE ++ Q QF
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKE-ERXQGGELQFQT 84
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV ++S HR++++L G C+ +LVY Y+++G+++ + + L
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ--------PPL 136
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK 381
W R R+A A +AY+H I HRD+K++NILLD++F A V DFG+++ +
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 196
Query: 382 THLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERN--L 439
H+ ++GT G++ PEY + + ++K+DV+ +GV+LLEL+TG++ AR+ + + L
Sbjct: 197 XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 440 VACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEG 499
+ L KE +L ++D + ++E++ + ++A+ C + + +RP M +V LEG
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
Query: 500 LRRSQRCLE 508
++R E
Sbjct: 317 DGLAERWEE 325
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 181/309 (58%), Gaps = 13/309 (4%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIH--QFIN 261
K F+ ELQ A+DN+ LG+GGFG VYKG L DG +VAVKR KE ++TQ QF
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE-ERTQGGELQFQT 76
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV ++S HR++++L G C+ +LVY Y+++G+++ + + L
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ--------PPL 128
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK 381
W R R+A A +AY+H I HRD+K++NILLD++F A V DFG+++ +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 382 THLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARV--EEERNL 439
H+ ++G G++ PEY + + ++K+DV+ +GV+LLEL+TG++ AR+ +++ L
Sbjct: 189 XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 440 VACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEG 499
+ L KE +L ++D + ++E++ + ++A+ C + + +RP M +V LEG
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
Query: 500 LRRSQRCLE 508
++R E
Sbjct: 309 DGLAERWEE 317
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 164/312 (52%), Gaps = 25/312 (8%)
Query: 202 RAKVFTADELQRATDNYNQSRF------LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQ 255
R F+ EL+ T+N+++ +G+GGFG VYKG + + ++ K + +D T
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 256 ---IHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXX 312
QF E+ ++++ H ++V+LLG + + LVY Y+ +G+L +
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--------- 121
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
LSW R ++A A + ++H + I HRDIKS+NILLD+ F+AK+SDFG
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFG 178
Query: 373 ISRSIPN-DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFA 431
++R+ +T + + I GT Y+ PE + + T KSD+YSFGVVLLE++TG P
Sbjct: 179 LARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDE 236
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + L +E + + +D ++ +A + AM +A +CL KRP +K
Sbjct: 237 HREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 492 QVSMELEGLRRS 503
+V L+ + S
Sbjct: 296 KVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 163/312 (52%), Gaps = 25/312 (8%)
Query: 202 RAKVFTADELQRATDNYNQSRF------LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQ 255
R F+ EL+ T+N+++ +G+GGFG VYKG + + ++ K + +D T
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 256 ---IHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXX 312
QF E+ ++++ H ++V+LLG + + LVY Y+ +G+L +
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--------- 121
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
LSW R ++A A + ++H + I HRDIKS+NILLD+ F+AK+SDFG
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFG 178
Query: 373 ISRSIPN-DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFA 431
++R+ +T + I GT Y+ PE + + T KSD+YSFGVVLLE++TG P
Sbjct: 179 LARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDE 236
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + L +E + + +D ++ +A + AM +A +CL KRP +K
Sbjct: 237 HREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 492 QVSMELEGLRRS 503
+V L+ + S
Sbjct: 296 KVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 162/312 (51%), Gaps = 25/312 (8%)
Query: 202 RAKVFTADELQRATDNYNQSRF------LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQ 255
R F+ EL+ T+N+++ +G+GGFG VYKG + + ++ K + +D T
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 64
Query: 256 ---IHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXX 312
QF E+ ++++ H ++V+LLG + + LVY Y+ +G+L +
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--------- 115
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
LSW R ++A A + ++H + I HRDIKS+NILLD+ F+AK+SDFG
Sbjct: 116 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFG 172
Query: 373 ISRSIPN-DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFA 431
++R+ + + I GT Y+ PE + + T KSD+YSFGVVLLE++TG P
Sbjct: 173 LARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDE 230
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + L +E + + +D ++ +A + AM +A +CL KRP +K
Sbjct: 231 HREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIK 289
Query: 492 QVSMELEGLRRS 503
+V L+ + S
Sbjct: 290 KVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 154/307 (50%), Gaps = 25/307 (8%)
Query: 202 RAKVFTADELQRATDNYNQSRF------LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQ 255
R F+ EL+ T+N+++ G+GGFG VYKG + + ++ K + +D T
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 256 ---IHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXX 312
QF E+ + ++ H ++V+LLG + + LVY Y +G+L +
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--------- 112
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
LSW R ++A A + ++H + I HRDIKS+NILLD+ F+AK+SDFG
Sbjct: 113 SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFG 169
Query: 373 ISRSIPNDKTHLTTT-IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFA 431
++R+ + + I GT Y PE + + T KSD+YSFGVVLLE++TG P
Sbjct: 170 LARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDE 227
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + L +E + + +D + +A + A +A +CL KRP +K
Sbjct: 228 HREPQLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIK 286
Query: 492 QVSMELE 498
+V L+
Sbjct: 287 KVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 14/206 (6%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID--KTQIHQFINEVVILSQINHRHIVKLLGCC 281
+G G FGTV++ GS VAVK E D ++++F+ EV I+ ++ H +IV +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
+ +V EY+S G+L +H L R+ +A +VA + Y+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAR---------EQLDERRRLSMAYDVAKGMNYLH 154
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQ 401
+ + PI HRD+KS N+L+D K++ KV DFG+SR + + GT ++ PE +
Sbjct: 155 NR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 402 SSQFTDKSDVYSFGVVLLELLTGKKP 427
+KSDVYSFGV+L EL T ++P
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 16/207 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID--KTQIHQFINEVVILSQINHRHIVKLLGCC 281
+G G FGTV++ GS VAVK E D ++++F+ EV I+ ++ H +IV +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
+ +V EY+S G+L +H L R+ +A +VA + Y+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAR---------EQLDERRRLSMAYDVAKGMNYLH 154
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT-TIQGTFGYLDPEYF 400
+ + PI HR++KS N+L+D K++ KV DFG+SR T L++ + GT ++ PE
Sbjct: 155 NR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVL 211
Query: 401 QSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ +KSDVYSFGV+L EL T ++P
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 149/316 (47%), Gaps = 57/316 (18%)
Query: 206 FTADELQRATDN-YNQSRFLGQGGFGTVYKG-MLPDGSIVAVK---------RSKEIDKT 254
F L DN + +G+GGFG V+KG ++ D S+VA+K ++ I+K
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 255 QIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX 314
Q +F EV I+S +NH +IVKL G L P +V E++ G L H + D
Sbjct: 68 Q--EFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKA------- 116
Query: 315 XXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL-----DDKFSAKVS 369
+ W ++R+ ++A + YM + PI HRD++S NI L + AKV+
Sbjct: 117 ----HPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 370 DFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQ--FTDKSDVYSFGVVLLELLTGKKP 427
DFG+S+ H + + G F ++ PE + + +T+K+D YSF ++L +LTG+ P
Sbjct: 172 DFGLSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 428 I---CFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNS 484
+ +++ FI++ +E L + R + EL C +
Sbjct: 228 FDEYSYGKIK--------FINMIREEGLRPTIPEDCPPRLRN-----VIEL---CWSGDP 271
Query: 485 KKRPTMKQVSMELEGL 500
KKRP + EL L
Sbjct: 272 KKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 57/316 (18%)
Query: 206 FTADELQRATDN-YNQSRFLGQGGFGTVYKG-MLPDGSIVAVK---------RSKEIDKT 254
F L DN + +G+GGFG V+KG ++ D S+VA+K ++ I+K
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 255 QIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX 314
Q +F EV I+S +NH +IVKL G L P +V E++ G L H + D
Sbjct: 68 Q--EFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKA------- 116
Query: 315 XXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL-----DDKFSAKVS 369
+ W ++R+ ++A + YM + PI HRD++S NI L + AKV+
Sbjct: 117 ----HPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 370 DFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQ--FTDKSDVYSFGVVLLELLTGKKP 427
DFG S+ H + + G F ++ PE + + +T+K+D YSF ++L +LTG+ P
Sbjct: 172 DFGTSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 428 I---CFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNS 484
+ +++ FI++ +E L + R + EL C +
Sbjct: 228 FDEYSYGKIK--------FINMIREEGLRPTIPEDCPPRLRN-----VIEL---CWSGDP 271
Query: 485 KKRPTMKQVSMELEGL 500
KKRP + EL L
Sbjct: 272 KKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 148/316 (46%), Gaps = 57/316 (18%)
Query: 206 FTADELQRATDN-YNQSRFLGQGGFGTVYKG-MLPDGSIVAVK---------RSKEIDKT 254
F L DN + +G+GGFG V+KG ++ D S+VA+K ++ I+K
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 255 QIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX 314
Q +F EV I+S +NH +IVKL G L P +V E++ G L H + D
Sbjct: 68 Q--EFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKA------- 116
Query: 315 XXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL-----DDKFSAKVS 369
+ W ++R+ ++A + YM + PI HRD++S NI L + AKV+
Sbjct: 117 ----HPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 370 DFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQ--FTDKSDVYSFGVVLLELLTGKKP 427
DF +S+ H + + G F ++ PE + + +T+K+D YSF ++L +LTG+ P
Sbjct: 172 DFSLSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 428 I---CFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNS 484
+ +++ FI++ +E L + R + EL C +
Sbjct: 228 FDEYSYGKIK--------FINMIREEGLRPTIPEDCPPRLRN-----VIEL---CWSGDP 271
Query: 485 KKRPTMKQVSMELEGL 500
KKRP + EL L
Sbjct: 272 KKRPHFSYIVKELSEL 287
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A VF DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 3 ADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 62
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 63 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 123 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 178 DI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 132 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 187 DI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 64
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 125 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 180 DI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 2 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 61
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 62 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 122 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 176
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 177 DI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 132 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 187 DI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 64
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 125 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 180 DI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 21/233 (9%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 126 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 376 SIPNDKTHLTTTIQGTFG-----YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I +G G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 181 DI----XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
Query: 223 FLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFI----NEVVILSQINHRHIVKLL 278
+G GGFG VY+ G VAVK ++ I Q I E + + + H +I+ L
Sbjct: 14 IIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G CL+ LV E+ G L+ + V A ++A +
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL-------------VNWAVQIARGMN 119
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFS--------AKVSDFGISRSIPNDKTHLTTTIQ- 389
Y+H A +PI HRD+KSSNIL+ K K++DFG++R + H TT +
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSA 174
Query: 390 -GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
G + ++ PE ++S F+ SDV+S+GV+L ELLTG+ P
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 126 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 181 DI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPD--GSIVAVKRSKEIDKTQI 256
A V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 34 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 93
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 94 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
SLS +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R
Sbjct: 154 LAPPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR 208
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 209 DI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 136/287 (47%), Gaps = 47/287 (16%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQ------FINEVVILSQINHRHIVKL 277
+G+G FG V K A R+K++ QI FI E+ LS++NH +IVKL
Sbjct: 17 VGRGAFGVVCK---------AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL 67
Query: 278 LGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G CL PV LV EY G+L + +H ++SW + +
Sbjct: 68 YGACLN---PVCLVMEYAEGGSLYNVLHG---AEPLPYYTAAHAMSW------CLQCSQG 115
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSA-KVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
VAY+HS + HRD+K N+LL + K+ DFG + I +TH+T +G+ ++
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWM 171
Query: 396 DPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEI 455
PE F+ S +++K DV+S+G++L E++T +KP +E A I A N
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPF------DEIGGPAFRIMWAVHNGTRPP 225
Query: 456 LDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRR 502
L + K + L RC + +RP+M+++ + L R
Sbjct: 226 LIKNLPK--------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 136/287 (47%), Gaps = 47/287 (16%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQ------FINEVVILSQINHRHIVKL 277
+G+G FG V K A R+K++ QI FI E+ LS++NH +IVKL
Sbjct: 16 VGRGAFGVVCK---------AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL 66
Query: 278 LGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G CL PV LV EY G+L + +H ++SW + +
Sbjct: 67 YGACLN---PVCLVMEYAEGGSLYNVLHG---AEPLPYYTAAHAMSW------CLQCSQG 114
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSA-KVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
VAY+HS + HRD+K N+LL + K+ DFG + I +TH+T +G+ ++
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWM 170
Query: 396 DPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEI 455
PE F+ S +++K DV+S+G++L E++T +KP +E A I A N
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPF------DEIGGPAFRIMWAVHNGTRPP 224
Query: 456 LDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRR 502
L + K + L RC + +RP+M+++ + L R
Sbjct: 225 LIKNLPK--------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 224 LGQGGFGTVY----KGMLP--DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKL 277
LG+G FG V+ +LP D +VAVK KE ++ F E +L+ + H+HIV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 278 LGCCLETEVPVLVYEYISSGTLSHHIHDH---XXXXXXXXXXXLSSLSWENRVRVACEVA 334
G C E ++V+EY+ G L+ + H L + VA +VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQGTFG 393
+ Y+ A + HRD+ + N L+ K+ DFG+SR I D +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ PE +FT +SDV+SFGVVL E+ T GK+P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 224 LGQGGFGTVY----KGMLP--DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKL 277
LG+G FG V+ +LP D +VAVK KE ++ F E +L+ + H+HIV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 278 LGCCLETEVPVLVYEYISSGTLSHHIHDH---XXXXXXXXXXXLSSLSWENRVRVACEVA 334
G C E ++V+EY+ G L+ + H L + VA +VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQGTFG 393
+ Y+ A + HRD+ + N L+ K+ DFG+SR I D +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ PE +FT +SDV+SFGVVL E+ T GK+P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 224 LGQGGFGTVY----KGMLP--DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKL 277
LG+G FG V+ +LP D +VAVK KE ++ F E +L+ + H+HIV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 278 LGCCLETEVPVLVYEYISSGTLSHHIHDH---XXXXXXXXXXXLSSLSWENRVRVACEVA 334
G C E ++V+EY+ G L+ + H L + VA +VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQGTFG 393
+ Y+ A + HRD+ + N L+ K+ DFG+SR I D +
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ PE +FT +SDV+SFGVVL E+ T GK+P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 15/228 (6%)
Query: 205 VFTADELQRATDNYNQSRFLGQGGFGTVY----KGMLPDG--SIVAVKRSKEIDKTQIH- 257
V+ DE + A + SR LGQG FG VY KG++ D + VA+K E +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 258 QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXX 317
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 318 LSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI 377
SLS +++A E+A +AY++++ + HRD+ + N + + F+ K+ DFG++R I
Sbjct: 121 PPSLS--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 378 PNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
+ + +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 176 -YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 147
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN---DKTHLTTTIQGTFGY 394
++ AS HRD+ + N +LD+KF+ KV+DFG++R + + D H T + +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 205
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN---DKTHLTTTIQGTFGY 394
++ AS HRD+ + N +LD+KF+ KV+DFG++R + + D H T + +
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 144
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN---DKTHLTTTIQGTFGY 394
++ AS HRD+ + N +LD+KF+ KV+DFG++R + + D H T + +
Sbjct: 145 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 147
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN---DKTHLTTTIQGTFGY 394
++ AS HRD+ + N +LD+KF+ KV+DFG++R + + D H T + +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 146
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN---DKTHLTTTIQGTFGY 394
++ AS HRD+ + N +LD+KF+ KV+DFG++R + + D H T + +
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 138
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 139 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 145
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 151
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN---DKTHLTTTIQGTFGY 394
++ AS HRD+ + N +LD+KF+ KV+DFG++R + + D H T + +
Sbjct: 152 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 146
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN---DKTHLTTTIQGTFGY 394
++ AS HRD+ + N +LD+KF+ KV+DFG++R + + D H T + +
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 146
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 164
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 165 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 143
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 144 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 165
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 166 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 21/227 (9%)
Query: 209 DELQRATDNYNQSRFLGQGGFGTVY----KGMLPDG--SIVAVKRSKEIDKTQIH-QFIN 261
DE + A + SR LGQG FG VY KG++ D + VA+K E + +F+N
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
E ++ + N H+V+LLG + + +++ E ++ G L ++ SL
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK 381
S +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R I
Sbjct: 123 S--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI---- 173
Query: 382 THLTTTIQGTFG-----YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
+G G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 174 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 146
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 144
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 145 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 145
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 224 LGQGGFGTVYKGML--PDGSIV--AVKRSKEI-DKTQIHQFINEVVILSQINHRHIVKLL 278
+G+G FG VY G L DG + AVK I D ++ QF+ E +I+ +H +++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 279 GCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
G CL +E P++V Y+ G L + I + ++ + +VA +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-----------KDLIGFGLQVAKGM 141
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK---THLTTTIQGTFGY 394
Y+ AS HRD+ + N +LD+KF+ KV+DFG++R + + + H T + +
Sbjct: 142 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ E Q+ +FT KSDV+SFGV+L EL+T P
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 209 DELQRATDNYNQSRFLGQGGFGTVY----KGMLPDG--SIVAVKRSKEIDKTQIH-QFIN 261
DE + A + SR LGQG FG VY KG++ D + VA+K E + +F+N
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
E ++ + N H+V+LLG + + +++ E ++ G L ++ SL
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK 381
S +++A E+A +AY++++ + HRD+ + N ++ + F+ K+ DFG++R I +
Sbjct: 125 S--KMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YET 178
Query: 382 THLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
+ +G ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 139/307 (45%), Gaps = 46/307 (14%)
Query: 208 ADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILS 267
AD+ + + +G G FGTVYKG V + Q+ F NEV +L
Sbjct: 16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I+ +G ++ +V ++ +L HH+H + + +
Sbjct: 76 KTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLH-----------ASETKFEMKKLI 123
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTT 386
+A + A + Y+H+ + I HRD+KS+NI L + + K+ DFG++ +H
Sbjct: 124 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 387 TIQGTFGYLDPEYFQ---SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACF 443
+ G+ ++ PE + S+ ++ +SDVY+FG+VL EL+TG+ P +
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP---------------Y 225
Query: 444 ISLAKENQLLEILDARVAKEAREEDIGA--------MAELAMRCLRLNSKKRPTMKQVSM 495
++ +Q++E+ V + + D+ M L CL+ +RP+ ++
Sbjct: 226 SNINNRDQIIEM----VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281
Query: 496 ELEGLRR 502
E+E L R
Sbjct: 282 EIEELAR 288
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 46/291 (15%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + + +A + A + Y+H+
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLH-----------ASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 140 S---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
S+ ++ +SDVY+FG+VL EL+TG+ P + ++ +Q++E+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIEM---- 237
Query: 460 VAKEAREEDIGA--------MAELAMRCLRLNSKKRPTMKQVSMELEGLRR 502
V + + D+ M L CL+ +RP+ ++ E+E L R
Sbjct: 238 VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
Query: 222 RFLGQGGFGTVY----KGMLP--DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIV 275
R LG+G FG V+ + P D +VAVK K+ F E +L+ + H HIV
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV 78
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXX-XXXXXXXXXLSSLSWENRVRVACEVA 334
K G C+E + ++V+EY+ G L+ + H + L+ + +A ++A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQGTFG 393
+ Y+ AS HRD+ + N L+ + K+ DFG+SR + D +
Sbjct: 139 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ PE +FT +SDV+S GVVL E+ T GK+P
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 46/291 (15%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + + +A + A + Y+H+
Sbjct: 80 PQLAI-VTQWCEGSSLYHHLH-----------ASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 128 S---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
S+ ++ +SDVY+FG+VL EL+TG+ P + ++ +Q++E+
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIEM---- 225
Query: 460 VAKEAREEDIGA--------MAELAMRCLRLNSKKRPTMKQVSMELEGLRR 502
V + + D+ M L CL+ +RP+ ++ E+E L R
Sbjct: 226 VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 30/232 (12%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIV----AVKRSKEIDKTQIH- 257
++ EL+R + LG G FGTVYKG+ +P+G V A+K E + +
Sbjct: 33 RILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 85
Query: 258 QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXX 317
+F++E +I++ ++H H+V+LLG CL + LV + + G L ++H+H
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLL-- 142
Query: 318 LSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI 377
L+W ++A + Y+ + HRD+ + N+L+ K++DFG++R +
Sbjct: 143 ---LNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL 190
Query: 378 PND-KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
D K + + ++ E +FT +SDV+S+GV + EL+T G KP
Sbjct: 191 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 30/284 (10%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + +A + A + Y+H+
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 124 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ ++ +SDVY+FG+VL EL+TG+ P ++ + R+ + + + L + +
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
K AM L CL+ +RP Q+ +E L RS
Sbjct: 238 CPK--------AMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 30/232 (12%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIV----AVKRSKEIDKTQIH- 257
++ EL+R + LG G FGTVYKG+ +P+G V A+K E + +
Sbjct: 10 RILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 258 QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXX 317
+F++E +I++ ++H H+V+LLG CL + LV + + G L ++H+H
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLL-- 119
Query: 318 LSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI 377
L+W ++A + Y+ + HRD+ + N+L+ K++DFG++R +
Sbjct: 120 ---LNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL 167
Query: 378 PND-KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
D K + + ++ E +FT +SDV+S+GV + EL+T G KP
Sbjct: 168 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FG V+ G + VA+K KE ++ FI E ++ +++H +V+L G CLE
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
LV+E++ G LS ++ E + + +V +AY+ +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA-----------ETLLGMCLDVCEGMAYLEEA 142
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
I HRD+ + N L+ + KVSDFG++R + +D+ +T + + PE F S
Sbjct: 143 CVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+++ KSDV+SFGV++ E+ + GK P
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FG V+ G + VA+K +E ++ FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
LV+E++ G LS ++ E + + +V +AY+ +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA-----------ETLLGMCLDVCEGMAYLEEA 122
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ I HRD+ + N L+ + KVSDFG++R + +D+ +T + + PE F S
Sbjct: 123 SVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+++ KSDV+SFGV++ E+ + GK P
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 30/284 (10%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + +A + A + Y+H+
Sbjct: 96 PQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLHAK 143
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 144 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 200
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ ++ +SDVY+FG+VL EL+TG+ P ++ + R+ + + + L + +
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIFMVGRGYLSPDLSKVRSN 257
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
K AM L CL+ +RP Q+ +E L RS
Sbjct: 258 CPK--------AMKRLMAECLKKKRDERPLFPQILASIELLARS 293
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 30/284 (10%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + +A + A + Y+H+
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 152 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ ++ +SDVY+FG+VL EL+TG+ P ++ + R+ + + + L + +
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
K AM L CL+ +RP Q+ +E L RS
Sbjct: 266 CPK--------AMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 30/301 (9%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVIL 266
++D+ + + +G G FGTVYKG V + Q+ F NEV +L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
+ H +I+ +G + ++ + V ++ +L HH+H +
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKL 111
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
+ +A + A + Y+H+ + I HRD+KS+NI L + + K+ DFG++ +H
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 386 TTIQGTFGYLDPEYFQ---SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
+ G+ ++ PE + + ++ +SDVY+FG+VL EL+TG+ P ++ + R+ +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIF 225
Query: 443 FISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRR 502
+ + L + + K AM L CL+ +RP Q+ +E L R
Sbjct: 226 MVGRGYLSPDLSKVRSNCPK--------AMKRLMAECLKKKRDERPLFPQILASIELLAR 277
Query: 503 S 503
S
Sbjct: 278 S 278
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G FG VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 127
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 128 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P + ++ +Q+ E+L+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSP--YPGID--------------PSQVYELLEKDYR 228
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 30/284 (10%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + +A + A + Y+H+
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 124 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ ++ +SDVY+FG+VL EL+TG+ P ++ + R+ + + + L + +
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
K AM L CL+ +RP Q+ +E L RS
Sbjct: 238 CPK--------AMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FG V+ G + VA+K +E ++ FI E ++ +++H +V+L G CLE
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
LV+E++ G LS ++ E + + +V +AY+ +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA-----------ETLLGMCLDVCEGMAYLEEA 125
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
I HRD+ + N L+ + KVSDFG++R + +D+ +T + + PE F S
Sbjct: 126 CVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+++ KSDV+SFGV++ E+ + GK P
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 30/284 (10%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + +A + A + Y+H+
Sbjct: 103 PQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLHAK 150
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 151 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 207
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ ++ +SDVY+FG+VL EL+TG+ P ++ + R+ + + + L + +
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIFMVGRGYLSPDLSKVRSN 264
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
K AM L CL+ +RP Q+ +E L RS
Sbjct: 265 CPK--------AMKRLMAECLKKKRDERPLFPQILASIELLARS 300
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 30/301 (9%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVIL 266
++D+ + + +G G FGTVYKG V + Q+ F NEV +L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
+ H +I+ +G + ++ + V ++ +L HH+H +
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKL 111
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
+ +A + A + Y+H+ + I HRD+KS+NI L + + K+ DFG++ +H
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 386 TTIQGTFGYLDPEYFQ---SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
+ G+ ++ PE + + ++ +SDVY+FG+VL EL+TG+ P ++ + R+ +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIF 225
Query: 443 FISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRR 502
+ + L + + K AM L CL+ +RP Q+ +E L R
Sbjct: 226 MVGRGYLSPDLSKVRSNCPK--------AMKRLMAECLKKKRDERPLFPQILASIELLAR 277
Query: 503 S 503
S
Sbjct: 278 S 278
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 30/301 (9%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVIL 266
++D+ + + +G G FGTVYKG V + Q+ F NEV +L
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
+ H +I+ +G + ++ + V ++ +L HH+H +
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKL 108
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
+ +A + A + Y+H+ + I HRD+KS+NI L + + K+ DFG++ +H
Sbjct: 109 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 386 TTIQGTFGYLDPEYFQ---SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
+ G+ ++ PE + + ++ +SDVY+FG+VL EL+TG+ P ++ + R+ +
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIF 222
Query: 443 FISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRR 502
+ + L + + K AM L CL+ +RP Q+ +E L R
Sbjct: 223 MVGRGYLSPDLSKVRSNCPK--------AMKRLMAECLKKKRDERPLFPQILASIELLAR 274
Query: 503 S 503
S
Sbjct: 275 S 275
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FG V+ G + VA+K +E ++ FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
LV+E++ G LS ++ E + + +V +AY+ +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA-----------ETLLGMCLDVCEGMAYLEEA 122
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
I HRD+ + N L+ + KVSDFG++R + +D+ +T + + PE F S
Sbjct: 123 CVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+++ KSDV+SFGV++ E+ + GK P
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FG V+ G + VA+K +E ++ FI E ++ +++H +V+L G CLE
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
LV+E++ G LS ++ E + + +V +AY+ +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA-----------ETLLGMCLDVCEGMAYLEEA 120
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
I HRD+ + N L+ + KVSDFG++R + +D+ +T + + PE F S
Sbjct: 121 CVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+++ KSDV+SFGV++ E+ + GK P
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 30/284 (10%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + +A + A + Y+H+
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 152 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ ++ +SDVY+FG+VL EL+TG+ P ++ + R+ + + + L + +
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
K AM L CL+ +RP Q+ +E L RS
Sbjct: 266 CPK--------AMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 30/284 (10%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FGTVYKG V + Q+ F NEV +L + H +I+ +G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ + V ++ +L HH+H + + +A + A + Y+H+
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLH-----------IIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTIQGTFGYLDPEYFQ- 401
+ I HRD+KS+NI L + + K+ DFG++ +H + G+ ++ PE +
Sbjct: 124 S---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 402 --SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ ++ +SDVY+FG+VL EL+TG+ P ++ + R+ + + + L + +
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLP--YSNI-NNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
K AM L CL+ +RP Q+ +E L RS
Sbjct: 238 CPK--------AMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 127
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 128 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P + ++ +Q+ E+L+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSP--YPGID--------------PSQVYELLEKDYR 228
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 134
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 135 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 191
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 235
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 130
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 131 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 187
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 231
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 134
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 135 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 235
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 129
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 130 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 230
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 133
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 134 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 234
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 235 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 131
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 132 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 188
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 232
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 130
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 131 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 187
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 231
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 134
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 135 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 235
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 142
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 143 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 199
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 243
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 244 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 129
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 130 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 230
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 129
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 130 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P + +Q+ E+L+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLEKDYR 230
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 129
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 130 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P + +Q+ E+L+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLEKDYR 230
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 134
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 135 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 235
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 131
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 132 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 232
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 129
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 130 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P + +Q+ E+L+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLEKDYR 230
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 129
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 130 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 230
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 131
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 132 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 232
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 134
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 135 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 235
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 112
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + TT
Sbjct: 113 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TT 166
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 127
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 128 KNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAY 184
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P + ++ +Q+ E+L+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSP--YPGID--------------PSQVYELLEKDYR 228
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 114
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + TT
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 168
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 116
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + TT
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 170
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + TT
Sbjct: 129 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 182
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 137
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + TT
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 191
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 25/222 (11%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLPDGS----IVAVKRSKE---IDKTQIHQFINEVVIL 266
A ++ +R LG+G FG VY+G+ + VAVK K+ +D + +F++E VI+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIM 63
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
++H HIVKL+G +E E ++ E G L H++ + +SL
Sbjct: 64 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNK-----------NSLKVLTL 111
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT 386
V + ++ A+AY+ S I HRDI NIL+ K+ DFG+SR I ++ + +
Sbjct: 112 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ ++ PE +FT SDV+ F V + E+L+ GK+P
Sbjct: 169 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 110
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ + TT
Sbjct: 111 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 164
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 114
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ + TT
Sbjct: 115 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 168
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 219 NQSRFLGQGGFGTVYKGMLPDGS-----IVAVKRSKE-IDKTQIHQFINEVVILSQINHR 272
+ + +G G FG VYKGML S VA+K K + Q F+ E I+ Q +H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+I++L G + + +++ EY+ +G L + + S L +R
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE--------FSVLQLVGMLR---- 154
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
G A M A++ HRD+ + NIL++ KVSDFG+SR + +D TT G
Sbjct: 155 --GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 393 G--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +FT SDV+SFG+V+ E++T G++P
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + TT
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 165
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 115
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ + TT
Sbjct: 116 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 169
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 25/222 (11%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLPDGS----IVAVKRSKE---IDKTQIHQFINEVVIL 266
A ++ +R LG+G FG VY+G+ + VAVK K+ +D + +F++E VI+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIM 79
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
++H HIVKL+G +E E ++ E G L H++ + +SL
Sbjct: 80 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNK-----------NSLKVLTL 127
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT 386
V + ++ A+AY+ S I HRDI NIL+ K+ DFG+SR I ++ + +
Sbjct: 128 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ ++ PE +FT SDV+ F V + E+L+ GK+P
Sbjct: 185 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 25/222 (11%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLPDGS----IVAVKRSKE---IDKTQIHQFINEVVIL 266
A ++ +R LG+G FG VY+G+ + VAVK K+ +D + +F++E VI+
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIM 67
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
++H HIVKL+G +E E ++ E G L H++ + +SL
Sbjct: 68 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNK-----------NSLKVLTL 115
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT 386
V + ++ A+AY+ S I HRDI NIL+ K+ DFG+SR I ++ + +
Sbjct: 116 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ ++ PE +FT SDV+ F V + E+L+ GK+P
Sbjct: 173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
+G G FG V+ G + VA+K +E ++ FI E ++ +++H +V+L G CLE
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
LV E++ G LS ++ E + + +V +AY+ +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA-----------ETLLGMCLDVCEGMAYLEEA 123
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
I HRD+ + N L+ + KVSDFG++R + +D+ +T + + PE F S
Sbjct: 124 CVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+++ KSDV+SFGV++ E+ + GK P
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 116
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + TT
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 170
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 147/308 (47%), Gaps = 46/308 (14%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEI--DKTQIHQF 259
A++F EL++ + LG G FGTV+KG+ +P+G + + ++ DK+ F
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 260 ---INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXX 316
+ ++ + ++H HIV+LLG C + + LV +Y+ G+L H+ H
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLL- 135
Query: 317 XLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
L+W ++A + Y+ + HR++ + N+LL +V+DFG++
Sbjct: 136 ----LNW------GVQIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFGVADL 182
Query: 377 IP-NDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVE 434
+P +DK L + + ++ E ++T +SDV+S+GV + EL+T G +P R+
Sbjct: 183 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 242
Query: 435 EERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVS 494
E +L+ LA+ + +D + + ++C ++ RPT K+++
Sbjct: 243 EVPDLLEKGERLAQPQ--ICTIDVYM--------------VMVKCWMIDENIRPTFKELA 286
Query: 495 MELEGLRR 502
E + R
Sbjct: 287 NEFTRMAR 294
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 222 RFLGQGGFGTVYKG----MLP--DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIV 275
R LG+G FG V+ + P D +VAVK K+ F E +L+ + H HIV
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSH----HIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
K G C + + ++V+EY+ G L+ H D L + +A
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
++A + Y+ AS HRD+ + N L+ K+ DFG+SR + D +
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ PE +FT +SDV+SFGV+L E+ T GK+P
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 147/308 (47%), Gaps = 46/308 (14%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEI--DKTQIHQF 259
A++F EL++ + LG G FGTV+KG+ +P+G + + ++ DK+ F
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 260 ---INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXX 316
+ ++ + ++H HIV+LLG C + + LV +Y+ G+L H+ H
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLL- 117
Query: 317 XLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
L+W ++A + Y+ + HR++ + N+LL +V+DFG++
Sbjct: 118 ----LNW------GVQIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFGVADL 164
Query: 377 IP-NDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVE 434
+P +DK L + + ++ E ++T +SDV+S+GV + EL+T G +P R+
Sbjct: 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 224
Query: 435 EERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVS 494
E +L+ LA+ + +D + + ++C ++ RPT K+++
Sbjct: 225 EVPDLLEKGERLAQPQ--ICTIDVYM--------------VMVKCWMIDENIRPTFKELA 268
Query: 495 MELEGLRR 502
E + R
Sbjct: 269 NEFTRMAR 276
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 108
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ + TT
Sbjct: 109 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 162
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 132
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 133 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 184 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 243 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY G + + LS +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK------------LSKFDEQRTA 116
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + TT
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TT 170
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 136
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 137 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 188 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 246
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 247 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 32/301 (10%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVKRSKEIDKTQI 256
+ VF DE + + + R LGQG FG VY+G D + VAVK E +
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ H+V+LLG + + ++V E ++ G L ++
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+L + +++A E+A +AY+++ + HRD+ + N ++ F+ K+ DFG++R
Sbjct: 124 RPPPTL--QEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFAR 432
I + + +G ++ PE + FT SD++SFGVVL E+ + ++P
Sbjct: 179 DI-YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----- 232
Query: 433 VEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
+ L+ E L ++D + + + +L C + N K RPT +
Sbjct: 233 ----------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 493 V 493
+
Sbjct: 282 I 282
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 131
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 132 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 183 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 241
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 242 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 163
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 164 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 215 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 274 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 135
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 136 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 187 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 246 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 113
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K+++FG S P+ + TT
Sbjct: 114 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TT 167
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 137
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 138 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 189 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 247
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 248 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 132
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 133 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 184 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 243 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + T
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TD 165
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 138
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 139 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 190 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 248
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 249 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 38/304 (12%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVKRSKEIDKTQI 256
+ VF DE + + + R LGQG FG VY+G D + VAVK E +
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ H+V+LLG + + ++V E ++ G L ++
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+L + +++A E+A +AY+++ + HRD+ + N ++ F+ K+ DFG++R
Sbjct: 124 RPPPTL--QEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 376 SIPNDKTHLTTTIQGTFG-----YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPIC 429
I +G G ++ PE + FT SD++SFGVVL E+ + ++P
Sbjct: 179 DI----XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-- 232
Query: 430 FARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPT 489
+ L+ E L ++D + + + +L C + N K RPT
Sbjct: 233 -------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPT 278
Query: 490 MKQV 493
++
Sbjct: 279 FLEI 282
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 114
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K+++FG S P+ + TT
Sbjct: 115 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TT 168
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 32/301 (10%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVKRSKEIDKTQI 256
+ VF DE + + + R LGQG FG VY+G D + VAVK E +
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ H+V+LLG + + ++V E ++ G L ++
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+L + +++A E+A +AY+++ + HRD+ + N ++ F+ K+ DFG++R
Sbjct: 124 RPPPTL--QEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFAR 432
I + + +G ++ PE + FT SD++SFGVVL E+ + ++P
Sbjct: 179 DI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----- 232
Query: 433 VEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
+ L+ E L ++D + + + +L C + N K RPT +
Sbjct: 233 ----------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 493 V 493
+
Sbjct: 282 I 282
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 132
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 133 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 184 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 243 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 139
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 140 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 191 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 249
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 250 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDH-----IKLLQYTSQICKGMEYLGT 135
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 136 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 187 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 246 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V+ G + VA+K K F+ E I+ ++ H +V+L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY++ G+L + D +L N V +A +VA +AY+
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEG----------RALKLPNLVDMAAQVAAGMAYIERM 124
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
I HRD++S+NIL+ + K++DFG++R I +++ + + PE
Sbjct: 125 NYI---HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL+T G+ P
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 150
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 151 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 202 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 260
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D +E M E C N +RP+ + +++ ++ +R
Sbjct: 261 ELLKNNGRLPRPDG-----CPDEIYMIMTE----CWNNNVNQRPSFRDLALRVDQIR 308
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 130
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 131 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 182 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 240
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 241 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 49/302 (16%)
Query: 222 RFLGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
R LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 277 LLGCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
G C L+ E++ G+L ++ H + L + +++ E
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDH-----IKLLQYTSQICKGMEYL 133
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---T 391
G Y+H RD+ + NIL++++ K+ DFG+++ +P DK G
Sbjct: 134 GTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVAC 442
F Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V
Sbjct: 185 FWYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 443 FISLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEG 499
I L K N L D G E+ M C N +RP+ + +++ ++
Sbjct: 244 LIELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 291
Query: 500 LR 501
+R
Sbjct: 292 IR 293
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 38/304 (12%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVKRSKEIDKTQI 256
+ VF DE + + + R LGQG FG VY+G D + VAVK E +
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 60
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ H+V+LLG + + ++V E ++ G L ++
Sbjct: 61 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 120
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+L + +++A E+A +AY+++ + HRD+ + N ++ F+ K+ DFG++R
Sbjct: 121 RPPPTL--QEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR 175
Query: 376 SIPNDKTHLTTTIQGTFG-----YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPIC 429
I +G G ++ PE + FT SD++SFGVVL E+ + ++P
Sbjct: 176 DI----XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-- 229
Query: 430 FARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPT 489
+ L+ E L ++D + + + +L C + N K RPT
Sbjct: 230 -------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPT 275
Query: 490 MKQV 493
++
Sbjct: 276 FLEI 279
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ + T
Sbjct: 112 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TX 165
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + T
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TD 165
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + T
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TE 165
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 49/300 (16%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 133
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H R++ + NIL++++ K+ DFG+++ +P DK + G F
Sbjct: 134 KRYIH---------RNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 185 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 243
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAM---RCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D G E+ M C N +RP+ + +++ ++ +R
Sbjct: 244 ELLKNNGRLPRPD------------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 112
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + T
Sbjct: 113 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DT 166
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 112
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + T
Sbjct: 113 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TD 166
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 31/214 (14%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVK----------RSKEIDKTQIHQFINEVVILSQINHRH 273
LG GG TVY L + +I+ +K R KE + +F EV SQ++H++
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKE---ETLKRFEREVHNSSQLSHQN 72
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV ++ E + LV EYI TLS +I H LS + + ++
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH------------GPLSVDTAINFTNQI 120
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ + H + I HRDIK NIL+D + K+ DFGI++++ T + GT
Sbjct: 121 LDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
Y PE + + +D+YS G+VL E+L G+ P
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G C L+ EY+ G+L ++ H + L + +++ E G
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-----IKLLQYTSQICKGMEYLGT 150
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
Y+H RD+ + NIL++++ K+ DFG+++ +P DK G F
Sbjct: 151 KRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-----GKKPICFARV----EEERNLVACFI 444
Y PE S+F+ SDV+SFGVVL EL T P F R+ ++ + +V I
Sbjct: 202 YA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 260
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 501
L K N L D +E M E C N +RP+ + +++ ++ +R
Sbjct: 261 ELLKNNGRLPRPDG-----CPDEIYMIMTE----CWNNNVNQRPSFRDLALRVDQIR 308
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL----------LYMATQISSAMEYLEK 336
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HR++ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 337 KNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 437
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 116
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ + T
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TD 170
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 40/289 (13%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKT--QIHQFINEVVILSQINHRHIVKLLGCC 281
+G G FGTVYKG VAVK K +D T Q F NEV +L + H +I+ +G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
+ + + V ++ +L H+H + +A + A + Y+H
Sbjct: 102 TKDNLAI-VTQWCEGSSLYKHLHVQETKFQMFQL-----------IDIARQTAQGMDYLH 149
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFGI----SRSIPNDKTHLTTTIQGTFGYLDP 397
+ I HRD+KS+NI L + + K+ DFG+ SR + + T G+ ++ P
Sbjct: 150 AKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAP 203
Query: 398 EYFQ---SSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLE 454
E + ++ F+ +SDVYS+G+VL EL+TG+ P R+ + + + L
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI---NNRDQIIFMVGRGYASPDLS 260
Query: 455 ILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
L K AM L C++ ++RP Q+ +E L+ S
Sbjct: 261 KLYKNCPK--------AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 333
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HR++ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 334 KNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 390
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 391 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 434
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 435 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY + I+A+K +++K + HQ EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G ++ L+ EY GT+ + LS +
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ +
Sbjct: 112 TYITELANALSYCHSKKVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AA 165
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY+G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
++ E+++ G L ++ + + +A +++ A+ Y+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL----------LYMATQISSAMEYLEK 375
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HR++ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 376 KNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 432
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
++F+ KSDV++FGV+L E+ T G P I L+ Q+ E+L+
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMSPY-------------PGIDLS---QVYELLEKDYR 476
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + N RP+ ++ E +
Sbjct: 477 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 114
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ +
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AA 168
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ +
Sbjct: 112 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AA 165
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 40/318 (12%)
Query: 202 RAKVFTADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKT 254
R T E + D N S + +G G FG V G L S VA+K K +
Sbjct: 17 RGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 76
Query: 255 QIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX 314
Q F+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 77 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-- 134
Query: 315 XXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGIS 374
+++ + G + M + + HRD+ + NIL++ KVSDFG+S
Sbjct: 135 ------------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Query: 375 RSIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFA 431
R + +D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 183 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---- 238
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
+ ++ ++ +++ +D + A+ +L + C + + RP +
Sbjct: 239 -----------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 286
Query: 492 QVSMELEGLRRSQRCLEM 509
Q+ L+ L R+ L++
Sbjct: 287 QIVSILDKLIRNPGSLKI 304
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 113
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ +
Sbjct: 114 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XX 167
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 114
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ +
Sbjct: 115 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XX 168
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ +
Sbjct: 112 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XX 165
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQI------HQFINEVVI 265
Q ++++ R LG+G FG VY + K + KTQ+ HQ EV I
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILA--LKVLFKTQLEKAGVEHQLRREVEI 65
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
S + H +I++L G + L+ EY GT+ + LS +
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSRFDEQR 113
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
E+A A++Y HS I HRDIK N+LL K++DFG S P+ +
Sbjct: 114 TATYITELANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHAPSSRR--- 167
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
TT+ GT YL PE + +K D++S GV+ E L G P
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 21/233 (9%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVKRSKEIDKTQI 256
+ V+ DE + + + R LGQG FG VY+G D + VAVK E +
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ H+V+LLG + + ++V E ++ G L ++
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+L + +++A E+A +AY+++ + HRD+ + N ++ F+ K+ DFG++R
Sbjct: 124 RPPPTL--QEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 376 SIPNDKTHLTTTIQGTFG-----YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I +G G ++ PE + FT SD++SFGVVL E+ +
Sbjct: 179 DI----XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 137
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ +
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DD 191
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY G + + LS +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK------------LSKFDEQRTA 116
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS + HRDIK N+LL K++DFG S P+ +
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XX 170
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 42/324 (12%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSKE-IDKTQI 256
K+ + + N + LG+G FG V K + VAVK KE +++
Sbjct: 11 KILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70
Query: 257 HQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXX 316
++E +L Q+NH H++KL G C + +L+ EY G+L + +
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 317 XLS------------SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF 364
S +L+ + + A +++ + Y+ A + + HRD+ + NIL+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGR 187
Query: 365 SAKVSDFGISRSIPNDKTHLTTTIQGTF--GYLDPEYFQSSQFTDKSDVYSFGVVLLELL 422
K+SDFG+SR + + +++ + QG ++ E +T +SDV+SFGV+L E++
Sbjct: 188 KMKISDFGLSRDVYEEDSYVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 423 T-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLR 481
T G P + + ER +L K +E D EE M L ++C +
Sbjct: 247 TLGGNP--YPGIPPER-----LFNLLKTGHRMERPD-----NCSEE----MYRLMLQCWK 290
Query: 482 LNSKKRPTMKQVSMELEGLRRSQR 505
KRP +S +LE + +R
Sbjct: 291 QEPDKRPVFADISKDLEKMMVKRR 314
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 5 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 117
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 118 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 221
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 222 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 275 LDKLIRNPGSLKI 287
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 34/284 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V G VAVK KE ++ +F E + +++H +VK G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVC-S 73
Query: 284 TEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
E P+ +V EYIS+G L +++ H L + + +V +A++ S
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHG-----------KGLEPSQLLEMCYDVCEGMAFLES 122
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+D KVSDFG++R + +D+ + + + PE F
Sbjct: 123 HQFI---HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHY 179
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
+++ KSDV++FG+++ E+ + GK P +L + K +Q + +A
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGKMPY---------DLYTNSEVVLKVSQGHRLYRPHLA 230
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQR 505
+ + ++ C +KRPT +Q+ +E LR +
Sbjct: 231 SD-------TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 32 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 144
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 145 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 248
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 249 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 301
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 302 LDKLIRNPGSLKI 314
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 10 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 68
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 69 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 116
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 117 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEX 173
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 174 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILS 267
Q A +++ R LG+G FG VY I+A+K +++K + HQ EV I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +I++L G + L+ EY GT+ + LS +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSKFDEQRTA 114
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
E+A A++Y HS I HRDIK N+LL K++DFG S P+ +
Sbjct: 115 TYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DD 168
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ GT YL PE + +K D++S GV+ E L GK P
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 3 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 61
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 62 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 109
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 110 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEX 166
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 167 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 59
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 60 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 107
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEX 164
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 222 RFLGQGGFGTVYKGML--PDGSIVAVK-RSKEIDKT--QIHQFINEVVILSQINHRHIVK 276
R +G G FG V G L P VAV ++ ++ T Q F+ E I+ Q +H ++V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G + ++V E++ +G L + H +++ + G
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--------------IQLVGMLRGI 154
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--Y 394
A M A + HRD+ + NIL++ KVSDFG+SR I +D + TT G +
Sbjct: 155 AAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW 214
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
PE Q +FT SDV+S+G+V+ E+++ G++P
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 2 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 60
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 61 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 108
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 109 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEX 165
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 166 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 59
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 60 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 107
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEX 164
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSI-VAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G +G VY G+ S+ VAVK KE D ++ +F+ E ++ +I H ++V+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
+V EY+ G L ++ + + +A +++ A+ Y+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL----------LYMATQISSAMEYLEK 148
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD+ + N L+ + KV+DFG+SR + D + + PE
Sbjct: 149 KNFI---HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 205
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVA 461
+ F+ KSDV++FGV+L E+ T G P + +Q+ ++L+
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYDLLEKGYR 249
Query: 462 KEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGL 500
E E + EL C + + RP+ + E +
Sbjct: 250 MEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 9 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 67
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 68 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 115
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 116 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEX 172
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 173 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 7 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 65
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 66 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 113
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 114 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEX 170
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 171 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 59
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 60 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 107
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 42/324 (12%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSKE-IDKTQI 256
K+ + + N + LG+G FG V K + VAVK KE +++
Sbjct: 11 KILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70
Query: 257 HQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXX 316
++E +L Q+NH H++KL G C + +L+ EY G+L + +
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 317 XLS------------SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF 364
S +L+ + + A +++ + Y+ A + + HRD+ + NIL+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGR 187
Query: 365 SAKVSDFGISRSIPNDKTHLTTTIQGTF--GYLDPEYFQSSQFTDKSDVYSFGVVLLELL 422
K+SDFG+SR + + + + + QG ++ E +T +SDV+SFGV+L E++
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 423 T-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLR 481
T G P + + ER +L K +E D EE M L ++C +
Sbjct: 247 TLGGNP--YPGIPPER-----LFNLLKTGHRMERPD-----NCSEE----MYRLMLQCWK 290
Query: 482 LNSKKRPTMKQVSMELEGLRRSQR 505
KRP +S +LE + +R
Sbjct: 291 QEPDKRPVFADISKDLEKMMVKRR 314
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG++R + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 6 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 64
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 65 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 112
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 113 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEY 169
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 170 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 7 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 65
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 66 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 113
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 114 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEY 170
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 171 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 42/324 (12%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSKE-IDKTQI 256
K+ + + N + LG+G FG V K + VAVK KE +++
Sbjct: 11 KILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70
Query: 257 HQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXX 316
++E +L Q+NH H++KL G C + +L+ EY G+L + +
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 317 XLS------------SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF 364
S +L+ + + A +++ + Y+ A + + HRD+ + NIL+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGR 187
Query: 365 SAKVSDFGISRSIPNDKTHLTTTIQGTF--GYLDPEYFQSSQFTDKSDVYSFGVVLLELL 422
K+SDFG+SR + + + + + QG ++ E +T +SDV+SFGV+L E++
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 423 T-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLR 481
T G P + + ER +L K +E D EE M L ++C +
Sbjct: 247 TLGGNP--YPGIPPER-----LFNLLKTGHRMERPD-----NCSEE----MYRLMLQCWK 290
Query: 482 LNSKKRPTMKQVSMELEGLRRSQR 505
KRP +S +LE + +R
Sbjct: 291 QEPDKRPVFADISKDLEKMMVKRR 314
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 42/292 (14%)
Query: 224 LGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG+G FG K + G ++ +K D+ F+ EV ++ + H +++K +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
+ + + EYI GTL I S W RV A ++A +AY+HS
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMD-----------SQYPWSQRVSFAKDIASGMAYLHS 126
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT-------------TIQ 389
+ I HRD+ S N L+ + + V+DFG++R + ++KT T+
Sbjct: 127 ---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE 449
G ++ PE + +K DV+SFG+VL E++ RV + + + +
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII--------GRVNADPDYLPRTMDFGL- 234
Query: 450 NQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 501
+ LD + + +RC L+ +KRP+ ++ LE LR
Sbjct: 235 -NVRGFLDRYCPPNCPP----SFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V EY+ +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+ R + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V G VA+K KE ++ +FI E ++ ++H +V+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ EY+++G L +++ + + + + +V A+ Y+ S
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT-----------QQLLEMCKDVCEAMEYLESK 123
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
HRD+ + N L++D+ KVSDFG+SR + +D+ + + + PE S
Sbjct: 124 Q---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+F+ KSD+++FGV++ E+ + GK P
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 20/207 (9%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V G VA+K KE ++ +FI E ++ ++H +V+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ EY+++G L +++ + + + + +V A+ Y+ S
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT-----------QQLLEMCKDVCEAMEYLESK 119
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--YLDPEYFQ 401
HRD+ + N L++D+ KVSDFG+SR + +D+ T+++ F + PE
Sbjct: 120 Q---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLM 174
Query: 402 SSQFTDKSDVYSFGVVLLELLT-GKKP 427
S+F+ KSD+++FGV++ E+ + GK P
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 20/207 (9%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V G VA+K KE ++ +FI E ++ ++H +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ EY+++G L +++ + + + + +V A+ Y+ S
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT-----------QQLLEMCKDVCEAMEYLESK 124
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--YLDPEYFQ 401
HRD+ + N L++D+ KVSDFG+SR + +D+ T+++ F + PE
Sbjct: 125 Q---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLM 179
Query: 402 SSQFTDKSDVYSFGVVLLELLT-GKKP 427
S+F+ KSD+++FGV++ E+ + GK P
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V G VA+K KE ++ +FI E ++ ++H +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ EY+++G L +++ + + + + +V A+ Y+ S
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT-----------QQLLEMCKDVCEAMEYLESK 139
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
HRD+ + N L++D+ KVSDFG+SR + +D+ + + + PE S
Sbjct: 140 Q---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYS 196
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+F+ KSD+++FGV++ E+ + GK P
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + DE + + LG G FG V+ G + VAVK K+ F+ E
Sbjct: 11 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEA 69
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ Q+ H+ +V+L T+ P+ ++ EY+ +G+L + L+
Sbjct: 70 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLT 117
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ +A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 118 INKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEY 174
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 175 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 20/207 (9%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V G VA+K KE ++ +FI E ++ ++H +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ EY+++G L +++ + + + + +V A+ Y+ S
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT-----------QQLLEMCKDVCEAMEYLESK 139
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--YLDPEYFQ 401
HRD+ + N L++D+ KVSDFG+SR + +D+ T+++ F + PE
Sbjct: 140 Q---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLM 194
Query: 402 SSQFTDKSDVYSFGVVLLELLT-GKKP 427
S+F+ KSD+++FGV++ E+ + GK P
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQI------HQFINEVVI 265
Q ++++ R LG+G FG VY + K + KTQ+ HQ EV I
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILA--LKVLFKTQLEKAGVEHQLRREVEI 65
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
S + H +I++L G + L+ EY GT+ + LS +
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------LSRFDEQR 113
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
E+A A++Y HS I HRDIK N+LL K++DFG S P+ +
Sbjct: 114 TATYITELANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHAPSSRR--- 167
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T+ GT YL PE + +K D++S GV+ E L G P
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 20/207 (9%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V G VA+K KE ++ +FI E ++ ++H +V+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ EY+++G L +++ + + + + +V A+ Y+ S
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT-----------QQLLEMCKDVCEAMEYLESK 130
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--YLDPEYFQ 401
HRD+ + N L++D+ KVSDFG+SR + +D+ T+++ F + PE
Sbjct: 131 Q---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLM 185
Query: 402 SSQFTDKSDVYSFGVVLLELLT-GKKP 427
S+F+ KSD+++FGV++ E+ + GK P
Sbjct: 186 YSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETG----------KYLRLPQLVDMAAQIASGMAYVERM 123
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 124 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 180
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ +I H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 134 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVKRSKEIDKTQI 256
+ V+ DE + + + R LGQG FG VY+G D + VAVK E +
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ H+V+LLG + + ++V E ++ G L ++
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+L + +++A E+A +AY+++ + HR++ + N ++ F+ K+ DFG++R
Sbjct: 124 RPPPTL--QEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTR 178
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SD++SFGVVL E+ +
Sbjct: 179 DI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 15/230 (6%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVKRSKEIDKTQI 256
+ V+ DE + + + R LGQG FG VY+G D + VAVK E +
Sbjct: 5 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 64
Query: 257 H-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+F+NE ++ H+V+LLG + + ++V E ++ G L ++
Sbjct: 65 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 124
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+L + +++A E+A +AY+++ + HR++ + N ++ F+ K+ DFG++R
Sbjct: 125 RPPPTL--QEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTR 179
Query: 376 SIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I + + +G ++ PE + FT SD++SFGVVL E+ +
Sbjct: 180 DI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V G VA+K KE ++ +FI E ++ ++H +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
++ EY+++G L +++ + + + + +V A+ Y+ S
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT-----------QQLLEMCKDVCEAMEYLESK 124
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
HRD+ + N L++D+ KVSDFG+SR + +D+ + + + PE S
Sbjct: 125 Q---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYS 181
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+F+ KSD+++FGV++ E+ + GK P
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 134 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 190
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETG----------KYLRLPQLVDMAAQIASGMAYVERM 126
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 127 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 183
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query: 209 DELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
DE + + LG G FG V+ G + VAVK K+ F+ E ++ Q
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQ 59
Query: 269 INHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H+ +V+L T+ P+ ++ EY+ +G+L + L+ +
Sbjct: 60 LQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGI----------KLTINKLL 107
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+A ++A +A++ I HRD++++NIL+ D S K++DFG++R I +++
Sbjct: 108 DMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 164
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 165 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 124
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 125 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 181
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 29/306 (9%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYKG------MLPDGSIVAVKRSKEIDKTQIHQ- 258
+ A + + D N + LG+G FG V + VAVK KE H+
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHIHDHXXXXXXXXXX 316
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 317 XLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG++R
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 377 IPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVE 434
I D ++ + ++ PE +T +SDV+SFGV+L E+ + G P +++
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 435 EERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVS 494
EE F KE + D + M + + C +RPT ++
Sbjct: 254 EE------FXRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELV 298
Query: 495 MELEGL 500
L L
Sbjct: 299 EHLGNL 304
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 122
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 123 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 179
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 46/314 (14%)
Query: 208 ADELQRATDN-------YNQSRFLGQGGFGTVYKGMLP--DGSIV--AVKRSKE--IDKT 254
+DEL+ ++ + R LG+G FG+V + L DGS V AVK K I +
Sbjct: 8 SDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS 67
Query: 255 QIHQFINEVVILSQINHRHIVKLLGCCLETE------VPVLVYEYISSGTLSHHIHDHXX 308
I +F+ E + + +H H+ KL+G L + +P+++ ++ G L H
Sbjct: 68 DIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL------HAF 121
Query: 309 XXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKV 368
+L + VR ++A + Y+ S I HRD+ + N +L + + V
Sbjct: 122 LLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFI---HRDLAARNCMLAEDMTVCV 178
Query: 369 SDFGISRSI-PNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKK 426
+DFG+SR I D + +L E + +T SDV++FGV + E++T G+
Sbjct: 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238
Query: 427 PICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKK 486
P +A +E + L N+L + E EE + +L +C + K+
Sbjct: 239 P--YAGIEN----AEIYNYLIGGNRL------KQPPECMEE----VYDLMYQCWSADPKQ 282
Query: 487 RPTMKQVSMELEGL 500
RP+ + MELE +
Sbjct: 283 RPSFTCLRMELENI 296
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 134 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
Y + +GQG GTVY M + G VA+++ + + INE++++ + + +IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAG 335
L L + +V EY++ G+L+ + + E ++ C E
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--------------EGQIAAVCRECLQ 127
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
A+ ++HS+ + HRDIKS NILL S K++DFG I +++ +T + GT ++
Sbjct: 128 ALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWM 183
Query: 396 DPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
PE + K D++S G++ +E++ G+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 134 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 35/269 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYK----GMLP--DGSIVAVKRSKEIDKTQIH-QFINEVVILSQ 268
+N R +G+G FG V++ G+LP ++VAVK KE + F E ++++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHI------------HDHXXXXXXXXXX 316
++ +IVKLLG C + L++EY++ G L+ + H
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 317 XLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
LS ++ +A +VA +AY+ + HRD+ + N L+ + K++DFG+SR+
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 377 IPN-DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVE 434
I + D ++ PE +++T +SDV+++GVVL E+ + G +P E
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283
Query: 435 E------ERNLVACFISLAKENQLLEILD 457
E + N++AC EN LE+ +
Sbjct: 284 EVIYYVRDGNILAC-----PENCPLELYN 307
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 134 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G L + L V +A ++A +AY+
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 134 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V E + +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 5 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V E + +G+L + H
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV------- 117
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 118 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 221
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 222 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 275 LDKLIRNPGSLKI 287
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 40/313 (12%)
Query: 207 TADELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSK-EIDKTQIHQF 259
T E + D N S + +G G FG V G L S VA+K K + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 260 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
+ E I+ Q +H +I++L G +++ ++V E + +G+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV------- 146
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+++ + G + M + + HRD+ + NIL++ KVSDFG+SR + +
Sbjct: 147 -------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 380 DKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEE 436
D TT G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------- 250
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
+ ++ ++ +++ +D + A+ +L + C + + RP +Q+
Sbjct: 251 ------YWEMSNQD-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 497 LEGLRRSQRCLEM 509
L+ L R+ L++
Sbjct: 304 LDKLIRNPGSLKI 316
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 32/282 (11%)
Query: 222 RFLGQGGFGTVYKGMLPD------GSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LGQG FG VY+G D + VAVK E + +F+NE ++ H+
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+LLG + + ++V E ++ G L ++ +L + +++A E+A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIA 139
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG- 393
+AY+++ + HRD+ + N ++ F+ K+ DFG++R I + + +G
Sbjct: 140 DGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPV 195
Query: 394 -YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQ 451
++ PE + FT SD++SFGVVL E+ + ++P + L+ E
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP---------------YQGLSNEQV 240
Query: 452 LLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
L ++D + + + +L C + N K RPT ++
Sbjct: 241 LKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 3 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLA 108
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 109 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 165
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 166 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 143/305 (46%), Gaps = 45/305 (14%)
Query: 205 VFTADELQRATDNYNQSRF-----LGQGGFGTVYKGMLPD--GSIVAVKRSKEIDKTQIH 257
V DE R+ N +G+G FG V ML D G+ VAVK K Q
Sbjct: 177 VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQ-- 231
Query: 258 QFINEVVILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXX 316
F+ E +++Q+ H ++V+LLG +E + + +V EY++ G+L ++
Sbjct: 232 AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------- 283
Query: 317 XLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
S L + ++ + +V A+ Y+ + + HRD+ + N+L+ + AKVSDFG+++
Sbjct: 284 --SVLGGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKE 338
Query: 377 IPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEE 436
+ + ++ T PE + +F+ KSDV+SFG++L E+ + F RV
Sbjct: 339 ASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYS------FGRVPYP 388
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
R + + ++ ++ D A+ ++ C L++ RPT Q+ +
Sbjct: 389 RIPLKDVVPRVEKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATRPTFLQLREQ 439
Query: 497 LEGLR 501
LE +R
Sbjct: 440 LEHIR 444
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 8 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 66 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLA 113
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 114 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 170
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 171 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 29/306 (9%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYKG------MLPDGSIVAVKRSKEIDKTQIHQ- 258
+ A + + D N + LG+G FG V + VAVK KE H+
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHIHDHXXXXXXXXXX 316
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 317 XLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG++R
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARD 193
Query: 377 IPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVE 434
I D ++ + ++ PE +T +SDV+SFGV+L E+ + G P +++
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 435 EERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVS 494
EE F KE + D + M + + C +RPT ++
Sbjct: 254 EE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELV 298
Query: 495 MELEGL 500
L L
Sbjct: 299 EHLGNL 304
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 11 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 69 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLA 116
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 117 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 173
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLA 111
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 112 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G L + L V +A ++A +AY+
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 134 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLA 111
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 112 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 34 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 92 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLA 139
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 140 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 196
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 197 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 9 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 67 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-----------SLDLA 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 115 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 171
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 172 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMG----------KYLRLPQLVDMAAQIASGMAYVERM 133
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD+ ++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 134 NYV---HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKF-----------SLDLA 111
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 112 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 168
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 127
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 128 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 115
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 116 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKF-----------SLDLA 111
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + +
Sbjct: 112 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXK 168
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKY----------LRLPQLVDMAAQIASGMAYVERM 299
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 300 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKY----------LRLPQLVDMAAQIASGMAYVERM 299
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 300 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K + + F+ E ++ ++ H +V+L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKY----------LRLPQLVDMAAQIASGMAYVERM 300
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG+ R I +++ + + PE
Sbjct: 301 NYV---HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYG 357
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 117
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 118 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 121
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 122 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 137
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 138 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 137
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 138 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY++ G+L + L V ++ ++A +AY+
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETG----------KYLRLPQLVDMSAQIASGMAYVERM 130
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 131 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYG 187
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
Y + +GQG GTVY M + G VA+++ + + INE++++ + + +IV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAG 335
L L + +V EY++ G+L+ + + E ++ C E
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--------------EGQIAAVCRECLQ 128
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
A+ ++HS+ + HR+IKS NILL S K++DFG I +++ +T + GT ++
Sbjct: 129 ALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWM 184
Query: 396 DPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
PE + K D++S G++ +E++ G+ P
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKY----------LRLPQLVDMAAQIASGMAYVERM 299
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 300 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
Y + +GQG GTVY M + G VA+++ + + INE++++ + + +IV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAG 335
L L + +V EY++ G+L+ + + E ++ C E
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--------------EGQIAAVCRECLQ 128
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
A+ ++HS+ + HRDIKS NILL S K++DFG I +++ + + GT ++
Sbjct: 129 ALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWM 184
Query: 396 DPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
PE + K D++S G++ +E++ G+ P
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V+ G + VAVK K+ F+ E ++ Q+ H+ +V+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 73
Query: 284 TEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
T+ P+ ++ EY+ +G+L + L+ + +A ++A +A++
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGMAFIEE 123
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HR+++++NIL+ D S K++DFG++R I +++ + + PE
Sbjct: 124 RNYI---HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 180
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKP 427
FT KSDV+SFG++L E++T G+ P
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 34/286 (11%)
Query: 224 LGQGGFGTVYKGML-PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHIVKLLGCC 281
+G+G FG V+ G L D ++VAVK +E + +F+ E IL Q +H +IV+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
+ + +V E + G + + L + +++ + A + Y+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-----------ARLRVKTLLQMVGDAAAGMEYLE 230
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI-QGTFGYLDPEYF 400
S I HRD+ + N L+ +K K+SDFG+SR + + + Q + PE
Sbjct: 231 SKCCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 401 QSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+++ +SDV+SFG++L E + G P + +L+ + Q E ++
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASP---------------YPNLSNQ-QTREFVEKG 331
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQR 505
E A+ L +C +RP+ + EL+ +R+ R
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 135
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 136 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 224 LGQGGFGTVYKGML--PDGSIVAV-----KRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
LG G FG V +G P G V+V K + FI EV + ++HR++++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G L T +V E G+L + H L +LS R A +VA
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL------LGTLS-----RYAVQVAEG 127
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFGY 394
+ Y+ S I HRD+ + N+LL + K+ DFG+ R++P + H + + F +
Sbjct: 128 MGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLL 453
PE ++ F+ SD + FGV L E+ T G++P +I L +Q+L
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---------------WIGL-NGSQIL 228
Query: 454 EILDARVAKEAREEDIGA-MAELAMRCLRLNSKKRPT 489
+D + R ED + + ++C + RPT
Sbjct: 229 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
Y + +GQG GTVY M + G VA+++ + + INE++++ + + +IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAG 335
L L + +V EY++ G+L+ + + E ++ C E
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--------------EGQIAAVCRECLQ 127
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
A+ ++HS+ + HRDIKS NILL S K++DFG I +++ + + GT ++
Sbjct: 128 ALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWM 183
Query: 396 DPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
PE + K D++S G++ +E++ G+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
Y + +GQG GTVY M + G VA+++ + + INE++++ + + +IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAG 335
L L + +V EY++ G+L+ + + E ++ C E
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--------------EGQIAAVCRECLQ 127
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
A+ ++HS+ + HRDIKS NILL S K++DFG I +++ + + GT ++
Sbjct: 128 ALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWM 183
Query: 396 DPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
PE + K D++S G++ +E++ G+ P
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 224 LGQGGFGTVYKGML--PDGSIVAV-----KRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
LG G FG V +G P G V+V K + FI EV + ++HR++++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G L T +V E G+L + H L +LS R A +VA
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL------LGTLS-----RYAVQVAEG 133
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFGY 394
+ Y+ S I HRD+ + N+LL + K+ DFG+ R++P + H + + F +
Sbjct: 134 MGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLL 453
PE ++ F+ SD + FGV L E+ T G++P +I L +Q+L
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---------------WIGL-NGSQIL 234
Query: 454 EILDARVAKEAREEDIGA-MAELAMRCLRLNSKKRPT 489
+D + R ED + + ++C + RPT
Sbjct: 235 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 224 LGQGGFGTVYKGML--PDGSIVAV-----KRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
LG G FG V +G P G V+V K + FI EV + ++HR++++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G L T +V E G+L + H L +LS R A +VA
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL------LGTLS-----RYAVQVAEG 133
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFGY 394
+ Y+ S I HRD+ + N+LL + K+ DFG+ R++P + H + + F +
Sbjct: 134 MGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLL 453
PE ++ F+ SD + FGV L E+ T G++P +I L +Q+L
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---------------WIGL-NGSQIL 234
Query: 454 EILDARVAKEAREEDIGA-MAELAMRCLRLNSKKRPT 489
+D + R ED + + ++C + RPT
Sbjct: 235 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY++ G+L + L V ++ ++A +AY+
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETG----------KYLRLPQLVDMSAQIASGMAYVERM 130
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 131 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 187
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 386 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 444 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKF-----------SLDLA 491
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 492 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 222 RFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQINHRHIV 275
+ LG G FGTVYKG+ +PDG VA+K +E + + + ++E +++ + ++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+LLG CL + V LV + + G L H+ ++ L ++ + ++A
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENR-----------GRLGSQDLLNWCMQIAK 130
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT-HLTTTIQGTFGY 394
++Y+ + + HRD+ + N+L+ K++DFG++R + D+T + + +
Sbjct: 131 GMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 187
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ E +FT +SDV+S+GV + EL+T G KP
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 224 LGQGGFGTVYKGML--PDGSIVAV-----KRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
LG G FG V +G P G V+V K + FI EV + ++HR++++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G L + +V E G+L + H L +LS R A +VA
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL------LGTLS-----RYAVQVAEG 123
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFGY 394
+ Y+ S I HRD+ + N+LL + K+ DFG+ R++P + H + + F +
Sbjct: 124 MGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLL 453
PE ++ F+ SD + FGV L E+ T G++P +I L +Q+L
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---------------WIGL-NGSQIL 224
Query: 454 EILDARVAKEAREEDIGA-MAELAMRCLRLNSKKRPT 489
+D + R ED + + ++C + RPT
Sbjct: 225 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 31/222 (13%)
Query: 219 NQSRFLGQGGFGTVYKGMLPDGS-------IVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+ R +G+G FG VY G D + I ++ R E+ Q+ F+ E +++ +NH
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ--QVEAFLREGLLMRGLNH 81
Query: 272 RHIVKLLGCCLETE-VPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+++ L+G L E +P ++ Y+ G L I + + ++ +
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-----------RNPTVKDLISFG 130
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND-----KTHLT 385
+VA + Y+ A HRD+ + N +LD+ F+ KV+DFG++R I + + H
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH 187
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + L E Q+ +FT KSDV+SFGV+L ELLT P
Sbjct: 188 ARLPVKWTAL--ESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 34/286 (11%)
Query: 224 LGQGGFGTVYKGML-PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHIVKLLGCC 281
+G+G FG V+ G L D ++VAVK +E + +F+ E IL Q +H +IV+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
+ + +V E + G + + L + +++ + A + Y+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-----------ARLRVKTLLQMVGDAAAGMEYLE 230
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI-QGTFGYLDPEYF 400
S I HRD+ + N L+ +K K+SDFG+SR + + + Q + PE
Sbjct: 231 SKCCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 401 QSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+++ +SDV+SFG++L E + G P + +L+ + Q E ++
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASP---------------YPNLSNQ-QTREFVEKG 331
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQR 505
E A+ L +C +RP+ + EL+ +R+ R
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LGQG FG V+ G + VA+K K F+ E ++ ++ H +V+L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
+ +V EY+S G+L + L V +A ++A +AY+
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKY----------LRLPQLVDMAAQIASGMAYVERM 382
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
+ HRD++++NIL+ + KV+DFG++R I +++ + + PE
Sbjct: 383 NYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 439
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
+FT KSDV+SFG++L EL T G+ P
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 224 LGQGGFGTVYKGML--PDGSIVAV-----KRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
LG G FG V +G P G V+V K + FI EV + ++HR++++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G L T +V E G+L + H L +LS R A +VA
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL------LGTLS-----RYAVQVAEG 123
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFGY 394
+ Y+ S I HRD+ + N+LL + K+ DFG+ R++P + H + + F +
Sbjct: 124 MGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLL 453
PE ++ F+ SD + FGV L E+ T G++P +I L +Q+L
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---------------WIGL-NGSQIL 224
Query: 454 EILDARVAKEAREEDIGA-MAELAMRCLRLNSKKRPT 489
+D + R ED + + ++C + RPT
Sbjct: 225 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 224 LGQGGFGTVYKGML--PDGSIVAV-----KRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
LG G FG V +G P G V+V K + FI EV + ++HR++++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G L + +V E G+L + H L +LS R A +VA
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL------LGTLS-----RYAVQVAEG 127
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFGY 394
+ Y+ S I HRD+ + N+LL + K+ DFG+ R++P + H + + F +
Sbjct: 128 MGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLL 453
PE ++ F+ SD + FGV L E+ T G++P +I L +Q+L
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---------------WIGL-NGSQIL 228
Query: 454 EILDARVAKEAREEDIGA-MAELAMRCLRLNSKKRPT 489
+D + R ED + + ++C + RPT
Sbjct: 229 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 224 LGQGGFGTVYKGML--PDGSIVAV-----KRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
LG G FG V +G P G V+V K + FI EV + ++HR++++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G L + +V E G+L + H L +LS R A +VA
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL------LGTLS-----RYAVQVAEG 123
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFGY 394
+ Y+ S I HRD+ + N+LL + K+ DFG+ R++P + H + + F +
Sbjct: 124 MGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQLL 453
PE ++ F+ SD + FGV L E+ T G++P +I L +Q+L
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---------------WIGL-NGSQIL 224
Query: 454 EILDARVAKEAREEDIGA-MAELAMRCLRLNSKKRPT 489
+D + R ED + + ++C + RPT
Sbjct: 225 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 143/305 (46%), Gaps = 45/305 (14%)
Query: 205 VFTADELQRATDNYNQSRF-----LGQGGFGTVYKGMLPD--GSIVAVKRSKEIDKTQIH 257
V DE R+ N +G+G FG V ML D G+ VAVK K Q
Sbjct: 5 VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQ-- 59
Query: 258 QFINEVVILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXX 316
F+ E +++Q+ H ++V+LLG +E + + +V EY++ G+L ++
Sbjct: 60 AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------- 111
Query: 317 XLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
S L + ++ + +V A+ Y+ + + HRD+ + N+L+ + AKVSDFG+++
Sbjct: 112 --SVLGGDCLLKFSLDVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKE 166
Query: 377 IPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEE 436
+ + ++ T PE + +F+ KSDV+SFG++L E+ + F RV
Sbjct: 167 ASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYS------FGRVPYP 216
Query: 437 RNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
R + + ++ ++ D A+ E+ C L++ RP+ Q+ +
Sbjct: 217 RIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFLQLREQ 267
Query: 497 LEGLR 501
LE ++
Sbjct: 268 LEHIK 272
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 222 RFLGQGGFGTVYKGMLPD-----GSIVAVKRSKEIDKTQIHQ--FINEVVILSQINHRHI 274
R LG+G FG V G +VAVK K D H+ + E+ IL + H HI
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 275 VKLLGCCLETEVPVL--VYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+K GCC + L V EY+ G+L ++ H S+ + A +
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-------------SIGLAQLLLFAQQ 142
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG-- 390
+ +AY+H+ I HRD+ + N+LLD+ K+ DFG+++++P G
Sbjct: 143 ICEGMAYLHAQHYI---HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS 199
Query: 391 -TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
F Y PE + +F SDV+SFGV L ELLT
Sbjct: 200 PVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 15/225 (6%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + D + ++ + LG G FG V+ G + + VAVK K + F+ E
Sbjct: 1 KPWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEA 59
Query: 264 VILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSW 323
++ + H +V+L E ++ EY++ G+L + L L
Sbjct: 60 NLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-----LPKL-- 112
Query: 324 ENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH 383
+ + ++A +AY+ I HRD++++N+L+ + K++DFG++R I +++
Sbjct: 113 ---IDFSAQIAEGMAYIERKNYI---HRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 166
Query: 384 LTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L E++T GK P
Sbjct: 167 AREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 22/211 (10%)
Query: 224 LGQGGFGTVYKG---MLPDGSIVAVKRSKE-IDKTQIHQFINEVVILSQINHRHIVKLLG 279
LG G FG+V +G M VA+K K+ +K + + E I+ Q+++ +IV+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
C + E +LV E G L H +S N + +V+ + Y
Sbjct: 78 VC-QAEALMLVMEMAGGGPL------HKFLVGKREEIPVS-----NVAELLHQVSMGMKY 125
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF--GYLDP 397
+ + HRD+ + N+LL ++ AK+SDFG+S+++ D ++ T G + + P
Sbjct: 126 LEEKNFV---HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 398 EYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
E +F+ +SDV+S+GV + E L+ G+KP
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 121
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ G +
Sbjct: 122 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSKEIDKTQIHQ-FINEVV 264
E+QR + R +G+G FG V++G M P+ VA+K K + + F+ E +
Sbjct: 386 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+ Q +H HIVKL+G E V +++ E + G L + SL
Sbjct: 444 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKF-----------SLDLA 491
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG+SR + + +
Sbjct: 492 SLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + ++ PE +FT SDV+ FGV + E+L G KP
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 222 RFLGQGGFGTVYKGMLPD-----GSIVAVKRSKEIDKTQIHQ-FINEVVILSQINHRHIV 275
R LG+G FG V G +VAVK KE Q+ + E+ IL + H HIV
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 276 KLLGCCLET-EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
K GCC + E V LV EY+ G+L ++ H L+ L + A ++
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG--------LAQL-----LLFAQQI 121
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG--- 390
+AY+H+ I HR + + N+LLD+ K+ DFG+++++P + G
Sbjct: 122 CEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
F Y PE + +F SDV+SFGV L ELLT
Sbjct: 179 VFWYA-PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 224 LGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG+G +G+VYK + + G IVA+K+ ++ + + I E+ I+ Q + H+VK G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
+ +V EY +G++S I +L+ + + + Y+H
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRN-----------KTLTEDEIATILQSTLKGLEYLHF 143
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRDIK+ NILL+ + AK++DFG++ + D + GT ++ PE Q
Sbjct: 144 MRKI---HRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 403 SQFTDKSDVYSFGVVLLELLTGKKP 427
+ +D++S G+ +E+ GK P
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 222 RFLGQGGFGTVYKGMLPD-----GSIVAVKRSKEIDKTQIHQ-FINEVVILSQINHRHIV 275
R LG+G FG V G +VAVK KE Q+ + E+ IL + H HIV
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 276 KLLGCCLET-EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
K GCC + E V LV EY+ G+L ++ H L+ L + A ++
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG--------LAQL-----LLFAQQI 120
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG--- 390
+AY+H+ I HR + + N+LLD+ K+ DFG+++++P + G
Sbjct: 121 CEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
F Y PE + +F SDV+SFGV L ELLT
Sbjct: 178 VFWYA-PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 40/281 (14%)
Query: 224 LGQGGFGTVYKGMLPD--GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCC 281
+G+G FG V ML D G+ VAVK K Q F+ E +++Q+ H ++V+LLG
Sbjct: 14 IGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSNLVQLLGVI 68
Query: 282 LETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYM 340
+E + + +V EY++ G+L ++ S L + ++ + +V A+ Y+
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGR----------SVLGGDCLLKFSLDVCEAMEYL 118
Query: 341 HSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYF 400
+ + HRD+ + N+L+ + AKVSDFG+++ + + ++ T PE
Sbjct: 119 EGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEAL 171
Query: 401 QSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARV 460
+ +F+ KSDV+SFG++L E+ + F RV R + + ++ ++ D
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 225
Query: 461 AKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 501
A+ E+ C L++ RP+ Q+ +LE ++
Sbjct: 226 P---------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 40/281 (14%)
Query: 224 LGQGGFGTVYKGMLPD--GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCC 281
+G+G FG V ML D G+ VAVK K Q F+ E +++Q+ H ++V+LLG
Sbjct: 20 IGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSNLVQLLGVI 74
Query: 282 LETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYM 340
+E + + +V EY++ G+L ++ S L + ++ + +V A+ Y+
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGR----------SVLGGDCLLKFSLDVCEAMEYL 124
Query: 341 HSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYF 400
+ + HRD+ + N+L+ + AKVSDFG+++ + + ++ T PE
Sbjct: 125 EGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEAL 177
Query: 401 QSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARV 460
+ + F+ KSDV+SFG++L E+ + F RV R + + ++ ++ D
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 231
Query: 461 AKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 501
A+ E+ C L++ RP+ Q+ +LE ++
Sbjct: 232 P---------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 40/272 (14%)
Query: 243 VAVKRSKE-IDKTQIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSH 301
VA+K K + Q F++E I+ Q +H +I++L G + ++V EY+ +G+L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 302 HIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD 361
+ H +++ + G A M + + HRD+ + N+L+D
Sbjct: 140 FLRTHDGQFTI--------------MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD 185
Query: 362 DKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLL 419
KVSDFG+SR + +D TT G + PE F+ SDV+SFGVV+
Sbjct: 186 SNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 420 ELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIG---AMAEL 475
E+L G++P + IS +E L +G A+ +L
Sbjct: 246 EVLAYGERPYWNMTNRD-------VISSVEEGYRL------------PAPMGCPHALHQL 286
Query: 476 AMRCLRLNSKKRPTMKQVSMELEGLRRSQRCL 507
+ C + +RP Q+ L+ L RS L
Sbjct: 287 MLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 43/306 (14%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEI---DKTQIHQFINEVVILSQIN 270
+D Y LG GG V+ L D VAVK + D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 271 HRHIVKLLGCCLETEVPV-----LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
H IV + E E P +V EY+ TL +H ++ +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTE------------GPMTPKR 117
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
+ V + A+ + H + I HRD+K +NI++ + KV DFGI+R+I + +T
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 386 TT--IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP--------ICFARVEE 435
T + GT YL PE + +SDVYS G VL E+LTG+ P + + V E
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 436 ERNLVACFISLAKENQLLEILDARVAK---EAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
+ A+ L LDA V K + E AE+ +R+++ + P +
Sbjct: 235 D-----PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289
Query: 493 VSMELE 498
V + E
Sbjct: 290 VLTDAE 295
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 479
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 480 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G G V+ G + VAVK K+ F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 284 TEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
T+ P+ ++ EY+ +G+L + L+ + +A ++A +A++
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGI----------KLTINKLLDMAAQIAEGMAFIEE 127
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
I HRD++++NIL+ D S K++DFG++R I + + + + PE
Sbjct: 128 RNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINY 184
Query: 403 SQFTDKSDVYSFGVVLLELLT-GKKP 427
FT KSDV+SFG++L E++T G+ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S++NH++I
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 165
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 166 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 43/306 (14%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEI---DKTQIHQFINEVVILSQIN 270
+D Y LG GG V+ L D VAVK + D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 271 HRHIVKLLGCCLETEVPV-----LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
H IV + E E P +V EY+ TL +H ++ +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTE------------GPMTPKR 117
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
+ V + A+ + H + I HRD+K +NI++ + KV DFGI+R+I + +T
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 386 TT--IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP--------ICFARVEE 435
T + GT YL PE + +SDVYS G VL E+LTG+ P + + V E
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 436 ERNLVACFISLAKENQLLEILDARVAK---EAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
+ A+ L LDA V K + E AE+ +R+++ + P +
Sbjct: 235 D-----PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289
Query: 493 VSMELE 498
V + E
Sbjct: 290 VLTDAE 295
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 220 QSRFLGQGGFGTVYKGMLP-----DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
+ + LG G FGTV KG V + +++ D + + E ++ Q+++ +I
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+++G C E E +LV E G L+ ++ + +N + + +V+
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVS 480
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF-- 392
+ Y+ S + HRD+ + N+LL + AK+SDFG+S+++ D+ + G +
Sbjct: 481 MGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +F+ KSDV+SFGV++ E + G+KP
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 40/272 (14%)
Query: 243 VAVKRSKE-IDKTQIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSH 301
VA+K K + Q F++E I+ Q +H +I++L G + ++V EY+ +G+L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 302 HIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD 361
+ H +++ + G A M + + HRD+ + N+L+D
Sbjct: 140 FLRTHDGQFTI--------------MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD 185
Query: 362 DKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--YLDPEYFQSSQFTDKSDVYSFGVVLL 419
KVSDFG+SR + +D TT G + PE F+ SDV+SFGVV+
Sbjct: 186 SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 420 ELLT-GKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIG---AMAEL 475
E+L G++P + IS +E L +G A+ +L
Sbjct: 246 EVLAYGERPYWNMTNRD-------VISSVEEGYRL------------PAPMGCPHALHQL 286
Query: 476 AMRCLRLNSKKRPTMKQVSMELEGLRRSQRCL 507
+ C + +RP Q+ L+ L RS L
Sbjct: 287 MLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 222 RFLGQGGFGTVYKGMLPD-----GSIVAVKRSKEIDKTQIHQ--FINEVVILSQINHRHI 274
R LG+G FG V G +VAVK K D H+ + E+ IL + H HI
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 275 VKLLGCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+K GCC + + LV EY+ G+L ++ H S+ + A +
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-------------SIGLAQLLLFAQQ 125
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG-- 390
+ +AY+HS I HR++ + N+LLD+ K+ DFG+++++P + G
Sbjct: 126 ICEGMAYLHSQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 391 -TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
F Y PE + +F SDV+SFGV L ELLT
Sbjct: 183 PVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 217 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQI 269
N R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
NH++IV+ +G L++ ++ E ++ G L + + SSL+ + + V
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHV 145
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTT 386
A ++A Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 146 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 387 TIQG-TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 217 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQI 269
N R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
NH++IV+ +G L++ ++ E ++ G L + + SSL+ + + V
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHV 145
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTT 386
A ++A Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 146 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 387 TIQG-TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 217 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQI 269
N R LG G FG VY+G + P VAVK E+ Q F+ E +I+S++
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
NH++IV+ +G L++ ++ E ++ G L + + SSL+ + + V
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHV 146
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTT 386
A ++A Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 147 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 387 TIQG-TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 129/306 (42%), Gaps = 43/306 (14%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEI---DKTQIHQFINEVVILSQIN 270
+D Y LG GG V+ L D VAVK + D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 271 HRHIVKLLGCCLETEVPV-----LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
H IV + E E P +V EY+ TL +H ++ +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTE------------GPMTPKR 117
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL- 384
+ V + A+ + H + I HRD+K +NIL+ + KV DFGI+R+I + +
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVX 174
Query: 385 -TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP--------ICFARVEE 435
T + GT YL PE + +SDVYS G VL E+LTG+ P + + V E
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 436 ERNLVACFISLAKENQLLEILDARVAK---EAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
+ A+ L LDA V K + E AE+ +R+++ + P +
Sbjct: 235 D-----PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289
Query: 493 VSMELE 498
V + E
Sbjct: 290 VLTDAE 295
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 31/308 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYKG------MLPDGSIVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + VAVK KE H+
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHIHDHXXXXXXXXXX 316
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 317 XLSS--LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGIS 374
L L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG++
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLA 195
Query: 375 RSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFAR 432
R I D + + ++ PE +T +SDV+SFGV+L E+ + G P +
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 433 VEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
++EE F KE + D + M + + C +RPT +
Sbjct: 256 IDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSE 300
Query: 493 VSMELEGL 500
+ L L
Sbjct: 301 LVEHLGNL 308
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 217 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQI 269
N R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+
Sbjct: 23 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
NH++IV+ +G L++ ++ E ++ G L + + SSL+ + + V
Sbjct: 83 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHV 137
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTT 386
A ++A Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 138 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 194
Query: 387 TIQG-TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 195 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 217 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQI 269
N R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+
Sbjct: 48 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 107
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
NH++IV+ +G L++ ++ E ++ G L + + SSL+ + + V
Sbjct: 108 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHV 162
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTT 386
A ++A Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 163 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 219
Query: 387 TIQG-TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 220 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+ NH++I
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 165
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 166 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 136/297 (45%), Gaps = 40/297 (13%)
Query: 222 RFLGQGGFGTVYKG--MLPDGS--IVAVKRSKE-IDKTQIHQFINEVVILSQINHRHIVK 276
+ +G G FG V G LP VA+K K + Q F++E I+ Q +H +++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G ++ +++ E++ +G+L + + +++ + G
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--------------IQLVGMLRGI 144
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT--IQGTFG- 393
A M A + HRD+ + NIL++ KVSDFG+SR + +D + T T + G
Sbjct: 145 AAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 204
Query: 394 -YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQ 451
+ PE Q +FT SDV+S+G+V+ E+++ G++P ++ N ++ ++ +
Sbjct: 205 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN------AIEQDYR 258
Query: 452 LLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCLE 508
L +D A+ +L + C + + RP Q+ L+ + R+ L+
Sbjct: 259 LPPPMDCP----------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK 305
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+ NH++I
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 177
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLD---DKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 178 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 43/306 (14%)
Query: 215 TDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y LG GG V+ + D ++ ++ D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 271 HRHIVKLLGCCLETEVPV-----LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
H IV + E E P +V EY+ TL +H ++ +
Sbjct: 71 HPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVHTE------------GPMTPKR 117
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
+ V + A+ + H + I HRD+K +NI++ + KV DFGI+R+I + +T
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 386 TT--IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP--------ICFARVEE 435
T + GT YL PE + +SDVYS G VL E+LTG+ P + + V E
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 436 ERNLVACFISLAKENQLLEILDARVAK---EAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
+ A+ L LDA V K + E AE+ +R+++ + P +
Sbjct: 235 D-----PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289
Query: 493 VSMELE 498
V + E
Sbjct: 290 VLTDAE 295
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+ NH++I
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 165
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 166 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+ NH++I
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 157
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 158 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+ NH++I
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 168
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 169 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+ NH++I
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 191
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 192 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 248
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+ NH++I
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 151
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG++R I +
Sbjct: 152 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 222 RFLGQGGFGTVYKGMLPD-----GSIVAVKRSKEIDKTQIHQ--FINEVVILSQINHRHI 274
R LG+G FG V G +VAVK K D H+ + E+ IL + H HI
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 275 VKLLGCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+K GCC + + LV EY+ G+L ++ H S+ + A +
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-------------SIGLAQLLLFAQQ 125
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG-- 390
+ +AY+H+ I HR++ + N+LLD+ K+ DFG+++++P + G
Sbjct: 126 ICEGMAYLHAQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 391 -TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
F Y PE + +F SDV+SFGV L ELLT
Sbjct: 183 PVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYL-----LNW------C 124
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 125 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 22/214 (10%)
Query: 222 RFLGQGGFGTVYKGML--PDGS--IVAVKRSK-EIDKTQIHQFINEVVILSQINHRHIVK 276
R +G G FG V G L P VA+K K + Q F+ E I+ Q +H +I+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G +++ ++V EY+ +G+L + + +++ + G
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--------------IQLVGMLRGI 133
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--Y 394
A M + + HRD+ + NIL++ KVSDFG+SR + +D TT G +
Sbjct: 134 SAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G++VAVK+ + Q F E+ IL ++ IVK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 279 GCCLETEVP--VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G P LV EY+ SG L + H SS ++
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-----------QICKG 123
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
+ Y+ S + HRD+ + NIL++ + K++DFG+++ +P DK G F
Sbjct: 124 MEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
Y PE + F+ +SDV+SFGVVL EL T
Sbjct: 181 YA-PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 143/328 (43%), Gaps = 38/328 (11%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFI 260
+ADE Q NY + +G+G F V + G VAVK IDKTQ++ +
Sbjct: 6 SADE-QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKI---IDKTQLNSSSLQKLF 61
Query: 261 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-------- 113
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 114 ---EARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNL 439
T G+ Y PE FQ ++ + DV+S GV+L L++G P ++E R
Sbjct: 167 NK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
Query: 440 V-------ACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
V ++S EN L + L +K E I M + M + + +P ++
Sbjct: 225 VLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI--MKDRWMNVGHEDDELKPYVEP 282
Query: 493 VSMELEGLRRSQRCLEMCQVNQLLADEI 520
+ + + RR++ + M + + D +
Sbjct: 283 LP-DYKDPRRTELMVSMGYTREEIQDSL 309
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 126
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 127 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 43/306 (14%)
Query: 215 TDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y LG GG V+ + D ++ ++ D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 271 HRHIVKLLGCCLETEVPV-----LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
H IV + E E P +V EY+ TL +H ++ +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTE------------GPMTPKR 117
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
+ V + A+ + H + I HRD+K +NI++ + KV DFGI+R+I + +T
Sbjct: 118 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 386 TT--IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP--------ICFARVEE 435
T + GT YL PE + +SDVYS G VL E+LTG+ P + + V E
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 436 ERNLVACFISLAKENQLLEILDARVAK---EAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
+ A+ L LDA V K + E AE+ +R+++ + P +
Sbjct: 235 D-----PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPK 289
Query: 493 VSMELE 498
V + E
Sbjct: 290 VLTDAE 295
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 32/309 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D N + LG+G FG V + G+ + VAVK KE H+
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHIH---DHXXXXXXX 313
++E+ IL I H ++V LLG C + P++V E+ G LS ++ +
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGI 373
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG+
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGL 194
Query: 374 SRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFA 431
+R I D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
+++EE F KE + D + M + + C +RPT
Sbjct: 255 KIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFS 299
Query: 492 QVSMELEGL 500
++ L L
Sbjct: 300 ELVEHLGNL 308
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 125
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 124
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 125 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 123
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYL-----LNW------C 123
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 133
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 134 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 123
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 109/241 (45%), Gaps = 28/241 (11%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFI 260
+ADE Q NY + +G+G F V + G VAVK IDKTQ++ +
Sbjct: 6 SADE-QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKI---IDKTQLNSSSLQKLF 61
Query: 261 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-------- 113
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 114 ---EARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNL 439
T G+ Y PE FQ ++ + DV+S GV+L L++G P ++E R
Sbjct: 167 NK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
Query: 440 V 440
V
Sbjct: 225 V 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 22/211 (10%)
Query: 224 LGQGGFGTVYKG---MLPDGSIVAVKRSKE-IDKTQIHQFINEVVILSQINHRHIVKLLG 279
LG G FG+V +G M VA+K K+ +K + + E I+ Q+++ +IV+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
C + E +LV E G L H +S N + +V+ + Y
Sbjct: 404 VC-QAEALMLVMEMAGGGPL------HKFLVGKREEIPVS-----NVAELLHQVSMGMKY 451
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG--YLDP 397
+ + HR++ + N+LL ++ AK+SDFG+S+++ D ++ T G + + P
Sbjct: 452 LEEKNFV---HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 398 EYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
E +F+ +SDV+S+GV + E L+ G+KP
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 126
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 127 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 80 NPHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 127
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 128 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
LG G FG V+ G + + VAVK K + F+ E ++ + H +V+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSS 343
E ++ E+++ G+L + L L + + ++A +AY+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVL-----LPKL-----IDFSAQIAEGMAYIERK 128
Query: 344 ASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSS 403
I HRD++++N+L+ + K++DFG++R I +++ + + PE
Sbjct: 129 NYI---HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 404 QFTDKSDVYSFGVVLLELLT-GKKP 427
FT KS+V+SFG++L E++T GK P
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 126
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 127 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 217 NYNQSRF---LGQGGFGTVYKGMLPDGSI---VAVKRSKEIDKTQIHQ-FINEVVILSQI 269
++N +F +G+G FG V K + + A+KR KE H+ F E+ +L ++
Sbjct: 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 82
Query: 270 NHR-HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHD----HXXXXXXXXXXXLSSLSWE 324
H +I+ LLG C L EY G L + S+LS +
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ A +VA + Y+ I HRD+ + NIL+ + + AK++DFG+SR
Sbjct: 143 QLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRG-------Q 192
Query: 385 TTTIQGTFG-----YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPIC 429
++ T G ++ E S +T SDV+S+GV+L E+++ G P C
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 243
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 126
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 127 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 123
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEEDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDH----XXXXXXXXXXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 125
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 130
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 131 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 217 NYNQSRF---LGQGGFGTVYKGMLPDGSI---VAVKRSKEIDKTQIHQ-FINEVVILSQI 269
++N +F +G+G FG V K + + A+KR KE H+ F E+ +L ++
Sbjct: 13 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 72
Query: 270 NHR-HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHD----HXXXXXXXXXXXLSSLSWE 324
H +I+ LLG C L EY G L + S+LS +
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ A +VA + Y+ I HRD+ + NIL+ + + AK++DFG+SR
Sbjct: 133 QLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRG-------Q 182
Query: 385 TTTIQGTFG-----YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPIC 429
++ T G ++ E S +T SDV+S+GV+L E+++ G P C
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 233
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 117
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 118 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDH----XXXXXXXXXXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 148
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 149 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 129
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 130 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 27/243 (11%)
Query: 205 VFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----Q 258
+ +A + Q NY + +G+G F V + G VAVK IDKTQ++ +
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKI---IDKTQLNPTSLQK 60
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK------ 114
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP 378
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 115 -----EARAKFR-QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
Query: 379 NDKTHLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEER 437
T G+ Y PE FQ ++ + DV+S GV+L L++G P ++E R
Sbjct: 166 VGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 223
Query: 438 NLV 440
V
Sbjct: 224 ERV 226
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 120
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 121 VQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 224 LGQGGFGTVYKGMLPD-GSIVAVKRSK-EIDKTQIHQFINEVVILSQINHRHIVKL---- 277
LG GGFG V + + D G VA+K+ + E+ ++ E+ I+ ++NH ++V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 278 --LGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
L ++P+L EY G L +++ + LS +++
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---------DISS 132
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLD---DKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
A+ Y+H + I HRD+K NI+L + K+ D G ++ + D+ L T GT
Sbjct: 133 ALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTL 187
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
YL PE + ++T D +SFG + E +TG +P
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 143/328 (43%), Gaps = 38/328 (11%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFI 260
+ADE Q NY + +G+G F V + G VAV+ IDKTQ++ +
Sbjct: 6 SADE-QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRI---IDKTQLNSSSLQKLF 61
Query: 261 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-------- 113
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 114 ---EARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNL 439
T G+ Y PE FQ ++ + DV+S GV+L L++G P ++E R
Sbjct: 167 NK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
Query: 440 V-------ACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
V ++S EN L + L +K E I M + M + + +P ++
Sbjct: 225 VLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI--MKDRWMNVGHEDDELKPYVEP 282
Query: 493 VSMELEGLRRSQRCLEMCQVNQLLADEI 520
+ + + RR++ + M + + D +
Sbjct: 283 LP-DYKDPRRTELMVSMGYTREEIQDSL 309
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 224 LGQGGFGTVYKGMLPD-GSIVAVKRSK-EIDKTQIHQFINEVVILSQINHRHIVKL---- 277
LG GGFG V + + D G VA+K+ + E+ ++ E+ I+ ++NH ++V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 278 --LGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
L ++P+L EY G L +++ + LS +++
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---------DISS 133
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLD---DKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
A+ Y+H + I HRD+K NI+L + K+ D G ++ + D+ L T GT
Sbjct: 134 ALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTL 188
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
YL PE + ++T D +SFG + E +TG +P
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y LG GG V+ + D ++ ++ D + +F E + +N
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 271 HRHIVKLLGCCLETEVPV-----LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
H IV + E E P +V EY+ TL +H ++ +
Sbjct: 88 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTE------------GPMTPKR 134
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
+ V + A+ + H + I HRD+K +NI++ + KV DFGI+R+I + +T
Sbjct: 135 AIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 191
Query: 386 TT--IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
T + GT YL PE + +SDVYS G VL E+LTG+ P
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + +++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 138/321 (42%), Gaps = 43/321 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFINEVVILSQIN 270
NY + +G+G F V + G VAVK IDKTQ++ + EV I+ +N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKI---IDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSW--ENRVR 328
H +IVKL + LV EY S G + ++ H W E R
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---------------GWMKEKEAR 109
Query: 329 VAC-EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
++ AV Y H I HRD+K+ N+LLD + K++DFG S T
Sbjct: 110 AKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDT 164
Query: 388 IQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNLV------ 440
G+ Y PE FQ ++ + DV+S GV+L L++G P ++E R V
Sbjct: 165 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 224
Query: 441 -ACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEG 499
++S EN L + L +K E I M + M + + +P ++ + + +
Sbjct: 225 IPFYMSTDCENLLKKFLILNPSKRGTLEQI--MKDRWMNVGHEDDELKPYVEPLP-DYKD 281
Query: 500 LRRSQRCLEMCQVNQLLADEI 520
RR++ + M + + D +
Sbjct: 282 PRRTELMVSMGYTREEIQDSL 302
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXX----XXXXXLSSLSWENRVRV 329
I+ LLG C + ++ EY S G L ++ LS ++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTI 388
A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D TT
Sbjct: 156 AYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ PE +T +SDV+SFGV+L E+ T G P VEE L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKLL 265
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 266 KEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 222 RFLGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHRHI 274
R LG G FG VY+G + P VAVK E+ Q F+ E +I+S+ NH++I
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+ +G L++ ++ E ++ G L + + SSL+ + + VA ++A
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP-----SSLAMLDLLHVARDIA 151
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQG- 390
Y+ + I HRDI + N LL AK+ DFG+++ I +
Sbjct: 152 CGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ PE F FT K+D +SFGV+L E+ +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 80
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDH----XXXXXXXXXXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 254
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 255 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
Query: 496 ELE 498
+L+
Sbjct: 299 DLD 301
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIH-------DHXXXXXXXXXXXLSSLSWENR 326
I+ LLG C + ++ EY S G L ++ ++ LSS ++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS---KDL 193
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
V A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D T
Sbjct: 194 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFI 444
T + ++ PE +T +SDV+SFGV+L E+ T G P VEE
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LF 303
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
L KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 304 KLLKEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 254 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 298
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 299 SELVEHLGNL 308
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 85
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 259
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 260 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
Query: 496 ELE 498
+L+
Sbjct: 304 DLD 306
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 125
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K + +
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 195
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 196 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 256 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 300
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 301 SELVEHLGNL 310
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIH-------DHXXXXXXXXXXXLSSLSWENR 326
I+ LLG C + ++ EY S G L ++ ++ LSS ++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS---KDL 144
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
V A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D T
Sbjct: 145 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFI 444
T + ++ PE +T +SDV+SFGV+L E+ T G P VEE
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LF 254
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
L KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 255 KLLKEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 82
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 256
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 257 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
Query: 496 ELE 498
+L+
Sbjct: 301 DLD 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIH-------DHXXXXXXXXXXXLSSLSWENR 326
I+ LLG C + ++ EY S G L ++ ++ LSS ++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS---KDL 145
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
V A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D T
Sbjct: 146 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFI 444
T + ++ PE +T +SDV+SFGV+L E+ T G P VEE
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LF 255
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
L KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 256 KLLKEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 127
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K + +
Sbjct: 128 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIH-------DHXXXXXXXXXXXLSSLSWENR 326
I+ LLG C + ++ EY S G L ++ ++ LSS ++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS---KDL 141
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
V A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D T
Sbjct: 142 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFI 444
T + ++ PE +T +SDV+SFGV+L E+ T G P VEE
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LF 251
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
L KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 252 KLLKEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 230
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 231 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 291 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 335
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 336 SELVEHLGNL 345
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXX----XXXXXLSSLSWENRVRV 329
I+ LLG C + ++ EY S G L ++ LS ++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTI 388
A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D TT
Sbjct: 156 AYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ PE +T +SDV+SFGV+L E+ T G P VEE L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKLL 265
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 266 KEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLVY-EYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 245 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 289
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 290 SELVEHLGNL 299
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIH-------DHXXXXXXXXXXXLSSLSWENR 326
I+ LLG C + ++ EY S G L ++ ++ LSS ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS---KDL 152
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
V A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D T
Sbjct: 153 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFI 444
T + ++ PE +T +SDV+SFGV+L E+ T G P VEE
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LF 262
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
L KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 263 KLLKEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 125
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K + +
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 217 NYNQSRF---LGQGGFGTVYKGMLPDGSI---VAVKRSKEIDKTQIHQ-FINEVVILSQI 269
++N +F +G+G FG V K + + A+KR KE H+ F E+ +L ++
Sbjct: 20 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 79
Query: 270 NHR-HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHD----HXXXXXXXXXXXLSSLSWE 324
H +I+ LLG C L EY G L + S+LS +
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ A +VA + Y+ I HR++ + NIL+ + + AK++DFG+SR
Sbjct: 140 QLLHFAADVARGMDYLSQKQFI---HRNLAARNILVGENYVAKIADFGLSRG-------Q 189
Query: 385 TTTIQGTFG-----YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPIC 429
++ T G ++ E S +T SDV+S+GV+L E+++ G P C
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 240
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIH-------DHXXXXXXXXXXXLSSLSWENR 326
I+ LLG C + ++ EY S G L ++ ++ LSS ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS---KDL 152
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLT 385
V A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D T
Sbjct: 153 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFI 444
T + ++ PE +T +SDV+SFGV+L E+ T G P VEE
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LF 262
Query: 445 SLAKENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
L KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 263 KLLKEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 139
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 314 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
Query: 496 ELE 498
+L+
Sbjct: 358 DLD 360
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 125
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K + +
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+ +E + + + ++E +++ ++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 157
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 158 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 37/292 (12%)
Query: 224 LGQGGFGTVYK----GMLPDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQIN-HRH 273
LG+G FG V G+ D + VAVK K + + + I+E+ ++ I H++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXX----XXXXXLSSLSWENRVRV 329
I+ LLG C + ++ EY S G L ++ LS ++ V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN-DKTHLTTTI 388
A +VA + Y+ S I HRD+ + N+L+ + K++DFG++R I + D TT
Sbjct: 141 AYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ PE +T +SDV+SFGV+L E+ T G P VEE L
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKLL 250
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMR-CLRLNSKKRPTMKQVSMELE 498
KE ++ + + + MR C +RPT KQ+ +L+
Sbjct: 251 KEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G++VAVK+ + Q F E+ IL ++ IVK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G + LV EY+ SG L + H SS ++
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-----------QICKG 139
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
+ Y+ S + HRD+ + NIL++ + K++DFG+++ +P DK + G F
Sbjct: 140 MEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLL 453
Y PE + F+ +SDV+SFGVVL EL T C E R ++ C + ++LL
Sbjct: 197 YA-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR-MMGCERDVPALSRLL 254
Query: 454 EILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCLE 508
E+L+ A + EL C + + RP+ + +L+ L R E
Sbjct: 255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCE 309
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 123
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K + +
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + LG G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 130
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K + +
Sbjct: 131 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 135/297 (45%), Gaps = 40/297 (13%)
Query: 222 RFLGQGGFGTVYKG--MLPDGS--IVAVKRSKE-IDKTQIHQFINEVVILSQINHRHIVK 276
+ +G G FG V G LP VA+K K + Q F++E I+ Q +H +++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
L G ++ +++ E++ +G+L + + +++ + G
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--------------IQLVGMLRGI 118
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT--IQGTFG- 393
A M A + HR + + NIL++ KVSDFG+SR + +D + T T + G
Sbjct: 119 AAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 394 -YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLAKENQ 451
+ PE Q +FT SDV+S+G+V+ E+++ G++P ++ N ++ ++ +
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN------AIEQDYR 232
Query: 452 LLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCLE 508
L +D A+ +L + C + + RP Q+ L+ + R+ L+
Sbjct: 233 LPPPMDCP----------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLK 279
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 141/328 (42%), Gaps = 38/328 (11%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFI 260
+ADE Q NY + +G+G F V + G VAVK IDKTQ++ +
Sbjct: 6 SADE-QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKI---IDKTQLNSSSLQKLF 61
Query: 261 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-------- 113
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 114 ---EARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 166
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNL 439
G Y PE FQ ++ + DV+S GV+L L++G P ++E R
Sbjct: 167 NK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
Query: 440 V-------ACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQ 492
V ++S EN L + L +K E I M + M + + +P ++
Sbjct: 225 VLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI--MKDRWMNVGHEDDELKPYVEP 282
Query: 493 VSMELEGLRRSQRCLEMCQVNQLLADEI 520
+ + + RR++ + M + + D +
Sbjct: 283 LP-DYKDPRRTELMVSMGYTREEIQDSL 309
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 254 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 298
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 299 SELVEHLGNL 308
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLVY-EYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 245 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 289
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 290 SELVEHLGNL 299
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ Y S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + L G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 130
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 131 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 146/330 (44%), Gaps = 42/330 (12%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFI 260
+ADE Q NY + +G+G F V + G VAV+ IDKTQ++ +
Sbjct: 6 SADE-QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRI---IDKTQLNSSSLQKLF 61
Query: 261 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-------- 113
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S N+
Sbjct: 114 ---EARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS----NE 162
Query: 381 KTHLTTTIQ--GTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEER 437
T + G+ Y PE FQ ++ + DV+S GV+L L++G P ++E R
Sbjct: 163 FTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR 222
Query: 438 NLV-------ACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
V ++S EN L + L +K E I M + M + + +P +
Sbjct: 223 ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI--MKDRWMNVGHEDDELKPYV 280
Query: 491 KQVSMELEGLRRSQRCLEMCQVNQLLADEI 520
+ + + + RR++ + M + + D +
Sbjct: 281 EPLP-DYKDPRRTELMVSMGYTREEIQDSL 309
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G++VAVK+ + Q F E+ IL ++ IVK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G + LV EY+ SG L + H SS ++
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-----------QICKG 127
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
+ Y+ S + HRD+ + NIL++ + K++DFG+++ +P DK + G F
Sbjct: 128 MEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
Y PE + F+ +SDV+SFGVVL EL T
Sbjct: 185 YA-PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 222 RFLGQGGFGTVYKGMLPDGS----IVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIV 275
+ +G G FG V G L VA+K ++ DK Q F++E I+ Q +H +I+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNII 78
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
L G + + +++ EY+ +G+L + + +++ + G
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--------------IQLVGMLRG 124
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG-- 393
+ M + + HRD+ + NIL++ KVSDFG+SR + +D TT G
Sbjct: 125 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 254 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 298
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 299 SELVEHLGNL 308
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 245 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 289
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 290 SELVEHLGNL 299
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + L G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 123
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 224 LGQGGFGTV----YKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+G FG+V Y + + G++VAVK+ + Q F E+ IL ++ IVK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 279 GCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
G + LV EY+ SG L + H SS ++
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-----------QICKG 126
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG---TFG 393
+ Y+ S + HRD+ + NIL++ + K++DFG+++ +P DK + G F
Sbjct: 127 MEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
Y PE + F+ +SDV+SFGVVL EL T
Sbjct: 184 YA-PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 222 RFLGQGGFGTVYKGMLPDGS----IVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIV 275
+ +G G FG V G L VA+K ++ DK Q F++E I+ Q +H +I+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNII 93
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
L G + + +++ EY+ +G+L + + +++ + G
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--------------IQLVGMLRG 139
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG-- 393
+ M + + HRD+ + NIL++ KVSDFG+SR + +D TT G
Sbjct: 140 IGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 199
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 33/310 (10%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGS--IVAVKRSKEIDKTQIHQ- 258
+ A + + D + LG+G FG V + G+ + VAVK KE H+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 259 FINEVVILSQINHR-HIVKLLGCCLETEVPVLVY-EYISSGTLSHHI----HDHXXXXXX 312
++E+ IL I H ++V LLG C + P++V E+ G LS ++ ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 313 XXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG 372
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 373 ISRSIPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICF 430
++R I D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTM 490
+++EE F KE + D + M + + C +RPT
Sbjct: 245 VKIDEE------FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTF 289
Query: 491 KQVSMELEGL 500
++ L L
Sbjct: 290 SELVEHLGNL 299
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQ 268
++ D++ + LG G G V+K P G ++A K EI +Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
N +IV G + E++ G+L + + + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------------KKAGRIPEQILGK 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
V+ V + Y+ I HRD+K SNIL++ + K+ DFG+S + + + +
Sbjct: 109 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEE-RNLVACFISLA 447
GT Y+ PE Q + ++ +SD++S G+ L+E+ G+ PI +E+ R +A F
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF---- 219
Query: 448 KENQLLEILDARVAKEAREEDIGAMA----ELAMRCLRLNSKKRPTMKQV 493
E+LD V + + G + + +CL N +R +KQ+
Sbjct: 220 ------ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 222 RFLGQGGFGTVYKGML-PDG----SIVAVKRSK-EIDKTQIHQFINEVVILSQINHRHIV 275
R LG+G FG V P+G VAVK K E I E+ IL + H +IV
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 276 KLLGCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
K G C E L+ E++ SG+L ++ + + ++ + +++ A ++
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-----------NKINLKQQLKYAVQI 123
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ---G 390
+ Y+ S + HRD+ + N+L++ + K+ DFG++++I DK T
Sbjct: 124 CKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
F Y PE S+F SDV+SFGV L ELLT
Sbjct: 181 VFWYA-PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSKEIDKTQIH-QFINEVVILSQIN 270
+ + + L G FGTVYKG+ +P+G VA+K +E + + + ++E +++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+ H+ +LLG CL + V L+ + + G L ++ +H L+W
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW------C 130
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
++A + Y+ + HRD+ + N+L+ K++DFG+++ + +K + +
Sbjct: 131 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
++ E +T +SDV+S+GV + EL+T G KP
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 222 RFLGQGGFGTVYKGMLPDGS----IVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIV 275
+ +G G FG V G L VA+K ++ DK Q F++E I+ Q +H +I+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNII 72
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
L G + + +++ EY+ +G+L + + +++ + G
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--------------IQLVGMLRG 118
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG-- 393
+ M + + HRD+ + NIL++ KVSDFG+SR + +D TT G
Sbjct: 119 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 222 RFLGQGGFGTVYKGML-PDGS----IVAVKRSK-EIDKTQIHQFINEVVILSQINHRHIV 275
R LG+G FG V P+G VAVK K E I E+ IL + H +IV
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 276 KLLGCCLET--EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
K G C E L+ E++ SG+L ++ + + ++ + +++ A ++
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-----------NKINLKQQLKYAVQI 135
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ---G 390
+ Y+ S + HRD+ + N+L++ + K+ DFG++++I DK T
Sbjct: 136 CKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 192
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
F Y PE S+F SDV+SFGV L ELLT
Sbjct: 193 VFWYA-PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 216 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSKEIDKTQ--IHQFINEVVI 265
D + LG+G FG V K + VAVK K+ D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEM 93
Query: 266 LSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX----XXXLSS 320
+ I H++I+ LLG C + ++ Y S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN- 379
+++++ V ++A + Y+ S I HRD+ + N+L+ + K++DFG++R I N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
D TT + ++ PE +T +SDV+SFGV++ E+ T G P VEE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMR---CLRLNSKKRPTMKQVSM 495
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 496 ELE 498
+L+
Sbjct: 312 DLD 314
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + D + ++ + LG G FG V+ + VAVK K + F+ E
Sbjct: 3 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEA 61
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ + H +VKL T+ P+ ++ E+++ G+L + L L
Sbjct: 62 NVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQP-----LPKL- 113
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ + ++A +A++ I HRD++++NIL+ K++DFG++R I +++
Sbjct: 114 ----IDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVIEDNEY 166
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ + PE FT KSDV+SFG++L+E++T G+ P
Sbjct: 167 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 61
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 109
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 167 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKE---IDKTQIHQFINEVVILSQI 269
DN+ R LG+G FG V + + G + AVK K+ + + + E ILS
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 270 NHRHIVKLLGCCLET-EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+ + L CC +T + V E+++ G L HI S E R R
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK-------------SRRFDEARAR 127
Query: 329 V-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR-SIPNDKTHLTT 386
A E+ A+ ++H I +RD+K N+LLD + K++DFG+ + I N T T
Sbjct: 128 FYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TA 182
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T GT Y+ PE Q + D ++ GV+L E+L G P
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 222 RFLGQGGFGTVYK-GMLPDGSIVAVKRSKE---IDKTQIHQFINEVVILSQINHRHIVKL 277
R LG G FG V+ +G A+K K+ + Q+ +E ++LS + H I+++
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 278 LGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR--VACEVAG 335
G + + ++ +YI G L + S + N V A EV
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLR--------------KSQRFPNPVAKFYAAEVCL 117
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
A+ Y+HS I +RD+K NILLD K++DFG ++ +P+ +T + GT Y+
Sbjct: 118 ALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYI 170
Query: 396 DPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
PE + + D +SFG+++ E+L G P
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 14/219 (6%)
Query: 216 DNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSKEIDKT-QIHQFINEVVILSQ 268
+N + LG G FG V + G+ + ++ VAVK K + ++E+ I+S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 269 IN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL--SSLSWEN 325
+ H +IV LLG C +++ EY G L + + + S+LS +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
+ + +VA +A++ S I HRD+ + N+LL + AK+ DFG++R I ND ++
Sbjct: 166 LLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 386 T-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
+ ++ PE +T +SDV+S+G++L E+ +
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINAM 61
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 109
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 210 ELQRATDN-YNQSRFLGQGGFGTVYKGML-PDGSIVAVKRSKEIDKTQIH---QFINEVV 264
E Q T N + Q R LG+GGFG V + G + A K+ ++ + +NE
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL ++N R +V L + LV ++ G L HI+ +
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ----------AGFPEA 286
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
V A E+ + +H I +RD+K NILLDD ++SD G++ +P +T
Sbjct: 287 RAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-- 341
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT GY+ PE ++ ++T D ++ G +L E++ G+ P
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 38/296 (12%)
Query: 221 SRFLGQGGFGTVYKGMLP--DGSI--VAVKRSKEIDKTQ--IHQFINEVVILSQINHRHI 274
+ LG+G FG+V +G L DG+ VAVK K + +Q I +F++E + +H ++
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 275 VKLLGCCLETEV-----PVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
++LLG C+E P+++ ++ G L H + + ++
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDL------HTYLLYSRLETGPKHIPLQTLLKF 152
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI- 388
++A + Y+ + HRD+ + N +L D + V+DFG+S+ I + + I
Sbjct: 153 MVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA 209
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ E +T KSDV++FGV + E+ T G P + E +
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY-------- 261
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 503
+L K+ E+ + + E+ C R + RPT + ++LE L S
Sbjct: 262 -------LLHGHRLKQP-EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 28/240 (11%)
Query: 208 ADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFIN 261
+DE Q NY + +G+G F V + G VA+K IDKTQ++ +
Sbjct: 5 SDE-QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKI---IDKTQLNPTSLQKLFR 60
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV I+ +NH +IVKL + L+ EY S G + ++ H
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK--------- 111
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK 381
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 112 --EARSKFR-QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 165
Query: 382 THLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNLV 440
T G+ Y PE FQ ++ + DV+S GV+L L++G P ++E R V
Sbjct: 166 K--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 109
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 59
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 107
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 108 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 210 ELQRATDN-YNQSRFLGQGGFGTVYKGML-PDGSIVAVKRSKEIDKTQIH---QFINEVV 264
E Q T N + Q R LG+GGFG V + G + A K+ ++ + +NE
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL ++N R +V L + LV ++ G L HI+ +
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ----------AGFPEA 286
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
V A E+ + +H I +RD+K NILLDD ++SD G++ +P +T
Sbjct: 287 RAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-- 341
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT GY+ PE ++ ++T D ++ G +L E++ G+ P
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
R ++ + LGQG FG V K D A+K+ + ++ ++ ++EV++L+ +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNH 61
Query: 272 RHIVKLLGCCLETEVPV-------------LVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
+++V+ LE V + EY +GTL IH
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY--- 118
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGI----- 373
W R+ ++ A++Y+HS I HRD+K NI +D+ + K+ DFG+
Sbjct: 119 ----W----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 374 ---------SRSIPNDKTHLTTTIQGTFGYLDPEYFQ-SSQFTDKSDVYSFGVVLLELL 422
S+++P +LT+ I GT Y+ E + + +K D+YS G++ E++
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
D++ R +G+G FG V D ++ + + K +++ ++ E+ I+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-A 330
+V L + E +V + + G L +H+ + E V++
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK-------------EETVKLFI 121
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
CE+ A+ Y+ + I HRD+K NILLD+ ++DF I+ +P + TT+ G
Sbjct: 122 CELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAG 176
Query: 391 TFGYLDPEYFQSSQ---FTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACF 443
T Y+ PE F S + ++ D +S GV ELL G++P + +V F
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 109
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID----KTQIHQFINEVVILSQINHRHIVKLLG 279
+G+G FG V+KG+ D V K ID + +I E+ +LSQ + ++ K G
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC---EVAGA 336
L+ ++ EY+ G+ L + ++A E+
Sbjct: 89 SYLKGSKLWIIMEYLGGGS----------------ALDLLRAGPFDEFQIATMLKEILKG 132
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLD 396
+ Y+HS I HRDIK++N+LL ++ K++DFG++ + + + T + GT ++
Sbjct: 133 LDYLHSEKKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 188
Query: 397 PEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
PE Q S + K+D++S G+ +EL G+ P
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 19/229 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQINHRH 273
D++ + LG G G V+K P G ++A K EI +Q I E+ +L + N +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV G + E++ G+L + + + +V+ V
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK------------KAGRIPEQILGKVSIAV 140
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ Y+ I HRD+K SNIL++ + K+ DFG+S + + + + GT
Sbjct: 141 IKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 195
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
Y+ PE Q + ++ +SD++S G+ L+E+ G+ PI +E + C
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 244
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQINHRH 273
D++ + LG G G V K P G I+A K EI +Q I E+ +L + N +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV G + E++ G+L + + + E +V+ V
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKE------------AKRIPEEILGKVSIAV 123
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+AY+ I HRD+K SNIL++ + K+ DFG+S + + + + GT
Sbjct: 124 LRGLAYLREKHQI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 178
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
Y+ PE Q + ++ +SD++S G+ L+EL G+ PI
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID----KTQIHQFINEVVILSQINHRHIVKLLG 279
+G+G FG V+KG+ D V K ID + +I E+ +LSQ + ++ K G
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
L+ ++ EY+ G+ + L + E+ + Y
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEP-------------GPLDETQIATILREILKGLDY 139
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY 399
+HS I HRDIK++N+LL + K++DFG++ + + + T + GT ++ PE
Sbjct: 140 LHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEV 195
Query: 400 FQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ S + K+D++S G+ +EL G+ P E + + + K N L+
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP--PTLEGN 247
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+K + E CL RPT K++
Sbjct: 248 YSK--------PLKEFVEACLNKEPSFRPTAKEL 273
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 109
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 109
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 19/229 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQINHRH 273
D++ + LG G G V+K P G ++A K EI +Q I E+ +L + N +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV G + E++ G+L + + + +V+ V
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK------------KAGRIPEQILGKVSIAV 175
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ Y+ I HRD+K SNIL++ + K+ DFG+S + + + + GT
Sbjct: 176 IKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 230
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
Y+ PE Q + ++ +SD++S G+ L+E+ G+ PI +E + C
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 279
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 109
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 208 ADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFIN 261
ADE Q NY + +G+G F V + G VA+K IDKTQ++ +
Sbjct: 8 ADE-QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKI---IDKTQLNPTSLQKLFR 63
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV I+ +NH +IVKL + L+ EY S G + ++ H
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK--------- 114
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK 381
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 115 --EARSKFR-QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168
Query: 382 THLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNLV 440
G Y PE FQ ++ + DV+S GV+L L++G P ++E R V
Sbjct: 169 K--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 36/298 (12%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + D + ++ + LG G FG V+ + VAVK K + F+ E
Sbjct: 176 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEA 234
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ + H +VKL T+ P+ ++ E+++ G+L + L L
Sbjct: 235 NVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQP-----LPKL- 286
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ + ++A +A++ I HRD++++NIL+ K++DFG++R I +++
Sbjct: 287 ----IDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVIEDNEY 339
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPI-CFARVEEERNLV 440
+ + PE FT KSDV+SFG++L+E++T G+ P + E R L
Sbjct: 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399
Query: 441 ACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
+ EN E+ + + MRC + ++RPT + + L+
Sbjct: 400 RGYRMPRPENCPEELYN-----------------IMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 39/274 (14%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID----KTQIHQFINEVVILSQINHRHIVKLLG 279
+G+G FG V+KG+ D V K ID + +I E+ +LSQ + ++ K G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
L+ ++ EY+ G+ + L + E+ + Y
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEP-------------GPLDETQIATILREILKGLDY 119
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY 399
+HS I HRDIK++N+LL + K++DFG++ + + + T + GT ++ PE
Sbjct: 120 LHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEV 175
Query: 400 FQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ S + K+D++S G+ +EL G+ P E + + + K N L+
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP--PTLEGN 227
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+K + E CL RPT K++
Sbjct: 228 YSK--------PLKEFVEACLNKEPSFRPTAKEL 253
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQ 268
++ D++ + LG G G V+K P G ++A K EI +Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
N +IV G + E++ G+L + + + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK------------KAGRIPEQILGK 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
V+ V + Y+ I HRD+K SNIL++ + K+ DFG+S + + + +
Sbjct: 109 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
GT Y+ PE Q + ++ +SD++S G+ L+E+ G+ PI +E + C
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQ 268
++ D++ + LG G G V+K P G ++A K EI +Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
N +IV G + E++ G+L + + + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK------------KAGRIPEQILGK 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
V+ V + Y+ I HRD+K SNIL++ + K+ DFG+S + + + +
Sbjct: 109 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
GT Y+ PE Q + ++ +SD++S G+ L+E+ G+ PI +E + C
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQ 268
++ D++ + LG G G V+K P G ++A K EI +Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
N +IV G + E++ G+L + + + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------------KKAGRIPEQILGK 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
V+ V + Y+ I HRD+K SNIL++ + K+ DFG+S + + + +
Sbjct: 109 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
GT Y+ PE Q + ++ +SD++S G+ L+E+ G+ PI +E + C
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYK----GMLPDG-SI-VAVKRSKE-IDKTQIHQFINEVVILSQ 268
+N + LG G FG V G+ G SI VAVK KE D ++ ++E+ +++Q
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 269 I-NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIH-----------DHXXXXXXXXXX 316
+ +H +IV LLG C + L++EY G L +++ ++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 317 XLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
L+ L++E+ + A +VA + ++ + + HRD+ + N+L+ K+ DFG++R
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 377 IPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
I +D ++ + ++ PE +T KSDV+S+G++L E+ + G P
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 107/241 (44%), Gaps = 28/241 (11%)
Query: 207 TADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-----QFI 260
+ADE Q NY + +G+G F V + G VAVK IDKTQ++ +
Sbjct: 6 SADE-QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKI---IDKTQLNSSSLQKLF 61
Query: 261 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
EV I +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK-------- 113
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
E R + ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 114 ---EARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFG 166
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNL 439
G Y PE FQ ++ + DV+S GV+L L++G P ++E R
Sbjct: 167 NK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 224
Query: 440 V 440
V
Sbjct: 225 V 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQ 268
++ D++ + LG G G V+K P G ++A K EI +Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
N +IV G + E++ G+L + + + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL------------KKAGRIPEQILGK 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
V+ V + Y+ I HRD+K SNIL++ + K+ DFG+S + + + +
Sbjct: 109 VSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSF 163
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
GT Y+ PE Q + ++ +SD++S G+ L+E+ G+ PI +E + C
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSK---EIDKTQIHQFINEVVILSQINHR 272
N+ + +G+G F VY+ L DG VA+K+ + +D I E+ +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+++K +E +V E +G LS I + W+ V +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV----WKYFV----Q 144
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
+ A+ +MHS + HRDIK +N+ + K+ D G+ R + KT ++ GT
Sbjct: 145 LCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTP 200
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
Y+ PE + + KSD++S G +L E+ + P
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 224 LGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQI-HQFINEVVILSQINHRHIVK 276
LG+ FG VYKG L VA+K K+ + + +F +E ++ +++ H ++V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHI---HDHXXXXXXXXXXXL-SSLSWENRVRVACE 332
LLG + + +++ Y S G L + H + S+L + V + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQGT 391
+A + Y+ S + H+D+ + N+L+ DK + K+SD G+ R + D L
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPIC 429
++ PE +F+ SD++S+GVVL E+ + G +P C
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 216 DNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSKEIDKT-QIHQFINEVVILSQ 268
+N + LG G FG V + G+ + ++ VAVK K + ++E+ I+S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 269 IN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL--SSLSWEN 325
+ H +IV LLG C +++ EY G L + + + S+ S +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT 385
+ + +VA +A++ S I HRD+ + N+LL + AK+ DFG++R I ND ++
Sbjct: 166 LLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 386 T-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
+ ++ PE +T +SDV+S+G++L E+ +
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
E+ I +NH ++VK G E + L EY S G L I +
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GM 101
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-ND 380
+ R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N+
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ L + GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 109
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 110 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 224 LGQGGFGTVYKGML------PDGSIVAVKRSKEIDKTQI-HQFINEVVILSQINHRHIVK 276
LG+ FG VYKG L VA+K K+ + + +F +E ++ +++ H ++V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHI---HDHXXXXXXXXXXXL-SSLSWENRVRVACE 332
LLG + + +++ Y S G L + H + S+L + V + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQGT 391
+A + Y+ S + H+D+ + N+L+ DK + K+SD G+ R + D L
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPIC 429
++ PE +F+ SD++S+GVVL E+ + G +P C
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM------LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQ 268
++++ + LG+G +G V + IV +KR+ + + E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+NH ++VK G E + L EY S G L I + + R
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI------------GMPEPDAQR 108
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP-NDKTHLTTT 387
++ V Y+H I I HRDIK N+LLD++ + K+SDFG++ N++ L
Sbjct: 109 FFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 388 IQGTFGYLDPEYFQSSQF-TDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + +F + DV+S G+VL +L G+ P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 224 LGQGGFGTVYKGMLP----DGSIVAVKRSKE-IDKTQIHQFINEVVILSQINHRHIVKLL 278
+G G FG V +G L S VA+K K + Q +F++E I+ Q H +I++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G + +++ E++ +G L + + +++ + G +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--------------IQLVGMLRGIAS 127
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI---PNDKTHLTTTIQGTFG-- 393
M A + HRD+ + NIL++ KVSDFG+SR + +D T+ T+++ G
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY-TSSLGGKIPIR 186
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 224 LGQGGFGTVYKGMLP----DGSIVAVKRSKE-IDKTQIHQFINEVVILSQINHRHIVKLL 278
+G G FG V +G L S VA+K K + Q +F++E I+ Q H +I++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G + +++ E++ +G L + + +++ + G +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--------------IQLVGMLRGIAS 129
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR------SIPNDKTHLTTTIQGTF 392
M A + HRD+ + NIL++ KVSDFG+SR S P + + L I
Sbjct: 130 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI--PI 187
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKP 427
+ PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQINHRH 273
D++ + LG G G V+K P G ++A K EI +Q I E+ +L + N +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV G + E++ G+L + + + +V+ V
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK------------AGRIPEQILGKVSIAV 132
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ Y+ I HRD+K SNIL++ + K+ DFG+S + + + + GT
Sbjct: 133 IKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 187
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
Y+ PE Q + ++ +SD++S G+ L+E+ G+ PI
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID----KTQIHQFINEVVILSQINHRHIVKLLG 279
+G+G FG VYKG+ D V K ID + +I E+ +LSQ + +I + G
Sbjct: 27 IGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
L++ ++ EY+ G+ L + E+ + Y
Sbjct: 85 SYLKSTKLWIIMEYLGGGS-------------ALDLLKPGPLEETYIATILREILKGLDY 131
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY 399
+HS I HRDIK++N+LL ++ K++DFG++ + + + + GT ++ PE
Sbjct: 132 LHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEV 187
Query: 400 FQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ S + K+D++S G+ +EL G+ P
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 207 TADELQR--ATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFI 260
T D L R D++ R LG+G FG VY IVA+K +I+K + HQ
Sbjct: 12 TPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR 71
Query: 261 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
E+ I + ++H +I++L + L+ EY G L + +
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS------------CT 119
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
+ + E+A A+ Y H + HRDIK N+LL K K++DFG S P+
Sbjct: 120 FDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSL 176
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ T+ GT YL PE + +K D++ GV+ ELL G P
Sbjct: 177 RR---KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID----KTQIHQFINEVVILSQINHRHIVKLLG 279
+G+G FG V+KG+ D V K ID + +I E+ +LSQ + ++ K G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
L+ ++ EY+ G+ + L + E+ + Y
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEP-------------GPLDETQIATILREILKGLDY 134
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY 399
+HS I HRDIK++N+LL + K++DFG++ + + + + GT ++ PE
Sbjct: 135 LHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEV 190
Query: 400 FQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ S + K+D++S G+ +EL G+ P E + + + K N L+
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP--PTLEGN 242
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+K + E CL RPT K++
Sbjct: 243 YSK--------PLKEFVEACLNKEPSFRPTAKEL 268
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID----KTQIHQFINEVVILSQINHRHIVKLLG 279
+G+G FG V+KG+ D V K ID + +I E+ +LSQ + ++ K G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
L+ ++ EY+ G+ + L + E+ + Y
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEP-------------GPLDETQIATILREILKGLDY 119
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY 399
+HS I HRDIK++N+LL + K++DFG++ + + + + GT ++ PE
Sbjct: 120 LHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEV 175
Query: 400 FQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDAR 459
+ S + K+D++S G+ +EL G+ P E + + + K N L+
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP--PTLEGN 227
Query: 460 VAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+K + E CL RPT K++
Sbjct: 228 YSK--------PLKEFVEACLNKEPSFRPTAKEL 253
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 216 DNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKR-SKEIDKTQIHQFINEVVILSQINHRH 273
D+Y +G G V P VA+KR + E +T + + + E+ +SQ +H +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV + + LV + +S G++ I H L + +R EV
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIATILR---EV 130
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN----DKTHLTTTIQ 389
+ Y+H + I HRD+K+ NILL + S +++DFG+S + + + T
Sbjct: 131 LEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 390 GTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKP 427
GT ++ PE + + D K+D++SFG+ +EL TG P
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 45/239 (18%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
R ++ + LGQG FG V K D A+K+ + ++ ++ ++EV++L+ +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNH 61
Query: 272 RHIVKLLGCCLETEVPV-------------LVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
+++V+ LE V + EY + TL IH
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY--- 118
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGI----- 373
W R+ ++ A++Y+HS I HRD+K NI +D+ + K+ DFG+
Sbjct: 119 ----W----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 374 ---------SRSIPNDKTHLTTTIQGTFGYLDPEYFQ-SSQFTDKSDVYSFGVVLLELL 422
S+++P +LT+ I GT Y+ E + + +K D+YS G++ E++
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 216 DNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKR-SKEIDKTQIHQFINEVVILSQINHRH 273
D+Y +G G V P VA+KR + E +T + + + E+ +SQ +H +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV + + LV + +S G++ I H L + +R EV
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDII-KHIVAKGEHKSGVLDESTIATILR---EV 125
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND----KTHLTTTIQ 389
+ Y+H + I HRD+K+ NILL + S +++DFG+S + + + T
Sbjct: 126 LEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 390 GTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKP 427
GT ++ PE + + D K+D++SFG+ +EL TG P
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 216 DNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSKEIDKT-QIHQFINEVVILSQ 268
+N + LG G FG V + G+ + ++ VAVK K + ++E+ I+S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 269 IN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +IV LLG C +++ EY G L + + L + +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDG--RPLELRDLL 155
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT- 386
+ +VA +A++ S I HRD+ + N+LL + AK+ DFG++R I ND ++
Sbjct: 156 HFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 212
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
+ ++ PE +T +SDV+S+G++L E+ +
Sbjct: 213 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILSQINH 271
D+++ R LG+G FG VY I+A+K +++K + HQ E+ I S + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+I+++ + + L+ E+ G L + H +
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------------ 122
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
E+A A+ Y H I HRDIK N+L+ K K++DFG S P+ + + GT
Sbjct: 123 ELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGT 176
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI-CFARVEEERNLV 440
YL PE + +K D++ GV+ E L G P + E R +V
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILSQINH 271
D+++ R LG+G FG VY I+A+K +++K + HQ E+ I S + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+I+++ + + L+ E+ G L + H +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------------ 121
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
E+A A+ Y H I HRDIK N+L+ K K++DFG S P+ + + GT
Sbjct: 122 ELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGT 175
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI-CFARVEEERNLV 440
YL PE + +K D++ GV+ E L G P + E R +V
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 216 DNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSKEIDKT-QIHQFINEVVILSQ 268
+N + LG G FG V + G+ + ++ VAVK K + ++E+ I+S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 269 IN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +IV LLG C +++ EY G L + + L + +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDG--RPLELRDLL 163
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT- 386
+ +VA +A++ S I HRD+ + N+LL + AK+ DFG++R I ND ++
Sbjct: 164 HFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 220
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
+ ++ PE +T +SDV+S+G++L E+ +
Sbjct: 221 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 29/194 (14%)
Query: 240 GSIVAVKRSKEIDKTQIHQFI-NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGT 298
G VAVK ++ K Q + + NEVVI+ H ++V++ L E ++ E++ G
Sbjct: 70 GRQVAVK-MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 299 LSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE-VAGAVAYMHSSASIPIFHRDIKSSN 357
L+ + E ++ CE V A+AY+H+ + HRDIKS +
Sbjct: 129 LTDIVSQVRLN--------------EEQIATVCEAVLQALAYLHAQG---VIHRDIKSDS 171
Query: 358 ILLDDKFSAKVSDFG----ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYS 413
ILL K+SDFG IS+ +P K + GT ++ PE S + + D++S
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKDVPKRK-----XLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 414 FGVVLLELLTGKKP 427
G++++E++ G+ P
Sbjct: 227 LGIMVIEMVDGEPP 240
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 216 DNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHI 274
DN+ + +G+G G V + G +VAVK+ + + NEVVI+ H ++
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V++ L + +V E++ G L+ I H + ++ E V V
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALT-DIVTH------------TRMNEEQIAAVCLAVL 126
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFG----ISRSIPNDKTHLTTTIQG 390
A++ +H+ + HRDIKS +ILL K+SDFG +S+ +P K + G
Sbjct: 127 QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVG 178
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
T ++ PE + + D++S G++++E++ G+ P
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 224 LGQGGFGTV-YKGMLPDGSIVAVKRSKEIDKTQIHQFI-NEVVILSQINHRHIVKLLGCC 281
+G+G G V + G +VAVK+ ++ K Q + + NEVVI+ H ++V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
L + +V E++ G L+ I H + ++ E V V A++ +H
Sbjct: 141 LVGDELWVVMEFLEGGALT-DIVTH------------TRMNEEQIAAVCLAVLQALSVLH 187
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFG----ISRSIPNDKTHLTTTIQGTFGYLDP 397
+ + HRDIKS +ILL K+SDFG +S+ +P K + GT ++ P
Sbjct: 188 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYWMAP 239
Query: 398 EYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
E + + D++S G++++E++ G+ P
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 224 LGQGGFGTV-YKGMLPDGSIVAVKRSKEIDKTQIHQFI-NEVVILSQINHRHIVKLLGCC 281
+G+G G V + G +VAVK+ ++ K Q + + NEVVI+ H ++V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
L + +V E++ G L+ I H + ++ E V V A++ +H
Sbjct: 98 LVGDELWVVMEFLEGGALT-DIVTH------------TRMNEEQIAAVCLAVLQALSVLH 144
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFG----ISRSIPNDKTHLTTTIQGTFGYLDP 397
+ + HRDIKS +ILL K+SDFG +S+ +P K + GT ++ P
Sbjct: 145 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYWMAP 196
Query: 398 EYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
E + + D++S G++++E++ G+ P
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQINHRH 273
D++ + LG G G V+K P G ++A K EI +Q I E+ +L + N +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV G + E++ G+L + + + +V+ V
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------------KKAGRIPEQILGKVSIAV 116
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ Y+ I HRD+K SNIL++ + K+ DFG+S + ++ + GT
Sbjct: 117 IKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEFVGTRS 171
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
Y+ PE Q + ++ +SD++S G+ L+E+ G+ P
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 224 LGQGGFGTV-YKGMLPDGSIVAVKRSKEIDKTQIHQFI-NEVVILSQINHRHIVKLLGCC 281
+G+G G V + G +VAVK+ ++ K Q + + NEVVI+ H ++V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
L + +V E++ G L+ I H + ++ E V V A++ +H
Sbjct: 96 LVGDELWVVMEFLEGGALT-DIVTH------------TRMNEEQIAAVCLAVLQALSVLH 142
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFG----ISRSIPNDKTHLTTTIQGTFGYLDP 397
+ + HRDIKS +ILL K+SDFG +S+ +P K + GT ++ P
Sbjct: 143 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYWMAP 194
Query: 398 EYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
E + + D++S G++++E++ G+ P
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKR--SKEIDKTQI-HQFINEVVILSQINH 271
D+++ R LG+G FG VY I+A+K +++K + HQ E+ I S + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+I+++ + + L+ E+ G L + H +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------------ 121
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
E+A A+ Y H I HRDIK N+L+ K K++DFG S P+ + + GT
Sbjct: 122 ELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGT 175
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI-CFARVEEERNLV 440
YL PE + +K D++ GV+ E L G P + E R +V
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 224 LGQGGFGTV-YKGMLPDGSIVAVKRSKEIDKTQIHQFI-NEVVILSQINHRHIVKLLGCC 281
+G+G G V + G +VAVK+ ++ K Q + + NEVVI+ H ++V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
L + +V E++ G L+ I H + ++ E V V A++ +H
Sbjct: 218 LVGDELWVVMEFLEGGALT-DIVTH------------TRMNEEQIAAVCLAVLQALSVLH 264
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFG----ISRSIPNDKTHLTTTIQGTFGYLDP 397
+ + HRDIKS +ILL K+SDFG +S+ +P K + GT ++ P
Sbjct: 265 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYWMAP 316
Query: 398 EYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
E + + D++S G++++E++ G+ P
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 22/224 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSKEIDKT-QIHQFINEVVILSQ 268
+N + LG G FG V + G+ + ++ VAVK K + ++E+ I+S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 269 IN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIH-------DHXXXXXXXXXXXLSS 320
+ H +IV LLG C +++ EY G L + + ++ LSS
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
+ + + +VA +A++ S I HRD+ + N+LL + AK+ DFG++R I ND
Sbjct: 166 ---RDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 381 KTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
++ + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 224 LGQGGFGTV-YKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
+G+G G V + G +VAVK+ + + NEVVI+ H ++V++ L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHS 342
+ +V E++ G L+ I H + ++ E V V A++ +H+
Sbjct: 92 VGDELWVVMEFLEGGALT-DIVTH------------TRMNEEQIAAVCLAVLQALSVLHA 138
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFG----ISRSIPNDKTHLTTTIQGTFGYLDPE 398
+ HRDIKS +ILL K+SDFG +S+ +P K + GT ++ PE
Sbjct: 139 QG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-----XLVGTPYWMAPE 190
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + D++S G++++E++ G+ P
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 224 LGQGGFG-----TVYKGMLPDGSI-VAVKRSK-EIDKTQIHQFINEVVILSQI-NHRHIV 275
LG G FG T Y + D ++ VAVK K T+ ++E+ +LS + NH +IV
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDH------XXXXXXXXXXXLSSLSWENRVRV 329
LLG C +++ EY G L + + +L E+ +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT-TI 388
+ +VA +A++ S I HRD+ + NILL K+ DFG++R I ND ++
Sbjct: 151 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 252
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
+++ +++ + E M ++ C + KRPT KQ+ +E
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 224 LGQGGFG-----TVYKGMLPDGSI-VAVKRSK-EIDKTQIHQFINEVVILSQI-NHRHIV 275
LG G FG T Y + D ++ VAVK K T+ ++E+ +LS + NH +IV
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDH------XXXXXXXXXXXLSSLSWENRVRV 329
LLG C +++ EY G L + + +L E+ +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT-TI 388
+ +VA +A++ S I HRD+ + NILL K+ DFG++R I ND ++
Sbjct: 169 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 270
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
+++ +++ + E M ++ C + KRPT KQ+ +E
Sbjct: 271 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 224 LGQGGFG-----TVYKGMLPDGSI-VAVKRSK-EIDKTQIHQFINEVVILSQI-NHRHIV 275
LG G FG T Y + D ++ VAVK K T+ ++E+ +LS + NH +IV
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDH------XXXXXXXXXXXLSSLSWENRVRV 329
LLG C +++ EY G L + + +L E+ +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT-TI 388
+ +VA +A++ S I HRD+ + NILL K+ DFG++R I ND ++
Sbjct: 167 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 268
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
+++ +++ + E M ++ C + KRPT KQ+ +E
Sbjct: 269 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 224 LGQGGFG-----TVYKGMLPDGSI-VAVKRSK-EIDKTQIHQFINEVVILSQI-NHRHIV 275
LG G FG T Y + D ++ VAVK K T+ ++E+ +LS + NH +IV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDH------XXXXXXXXXXXLSSLSWENRVRV 329
LLG C +++ EY G L + + +L E+ +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT-TI 388
+ +VA +A++ S I HRD+ + NILL K+ DFG++R I ND ++
Sbjct: 174 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 275
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
+++ +++ + E M ++ C + KRPT KQ+ +E
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 34/291 (11%)
Query: 224 LGQGGFG-----TVYKGMLPDGSI-VAVKRSK-EIDKTQIHQFINEVVILSQI-NHRHIV 275
LG G FG T Y + D ++ VAVK K T+ ++E+ +LS + NH +IV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDH------XXXXXXXXXXXLSSLSWENRVRV 329
LLG C +++ EY G L + + +L E+ +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT-TI 388
+ +VA +A++ S I HRD+ + NILL K+ DFG++R I ND ++
Sbjct: 174 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
+ ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 275
Query: 448 KENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
+++ +++ + E M ++ C + KRPT KQ+ +E
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 36/223 (16%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIV 275
++ + +G GGFG V+K DG +KR K ++ + EV L++++H +IV
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIV 67
Query: 276 KLLGCC----------------LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
GC +T+ + E+ GTL I
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA--- 124
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+ + ++ V Y+HS I +RD+K SNI L D K+ DFG+ S+ N
Sbjct: 125 -------LELFEQITKGVDYIHSKKLI---NRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 174
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELL 422
D + +GT Y+ PE S + + D+Y+ G++L ELL
Sbjct: 175 DGKRXRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 166
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T T+
Sbjct: 167 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTL 219
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 213 RATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSKEID-----KTQIHQFINEVVIL 266
RA D Y +G G +G K DG I+ K E+D + + ++EV +L
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLL 59
Query: 267 SQINHRHIVKLLGCCLETEVPVL--VYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
++ H +IV+ ++ L V EY G L+ I L E
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--------TKGTKERQYLDEE 111
Query: 325 NRVRVACEVAGAVAYMH--SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+RV ++ A+ H S + HRD+K +N+ LD K + K+ DFG++R I N T
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDT 170
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLEL 421
T GT Y+ PE + +KSD++S G +L EL
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 224 LGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G FG VYK + G++ A K + + ++ +I E+ IL+ +H +IVKLLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAGAVAYMH 341
++ E+ G + L E +++V C ++ A+ ++H
Sbjct: 79 HDGKLWIMIEFCPGGAVD------------AIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT-HLTTTIQGTFGYLDPEYF 400
S I HRD+K+ N+L+ + +++DFG+S N KT + GT ++ PE
Sbjct: 127 SKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVV 181
Query: 401 QSSQFTD-----KSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKEN 450
D K+D++S G+ L+E+ + P E N + + +AK +
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEPP------HHELNPMRVLLKIAKSD 230
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 224 LGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G FG VYK + G++ A K + + ++ +I E+ IL+ +H +IVKLLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAGAVAYMH 341
++ E+ G + L E +++V C ++ A+ ++H
Sbjct: 87 HDGKLWIMIEFCPGGAVD------------AIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT-HLTTTIQGTFGYLDPEYF 400
S I HRD+K+ N+L+ + +++DFG+S N KT + GT ++ PE
Sbjct: 135 SKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVV 189
Query: 401 QSSQFTD-----KSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKEN 450
D K+D++S G+ L+E+ + P E N + + +AK +
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPP------HHELNPMRVLLKIAKSD 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 90/213 (42%), Gaps = 18/213 (8%)
Query: 218 YNQSRFLGQGGFGTVYKG-MLPDGSIVAVK-RSKEIDKTQIHQFINEVVILSQINHRHIV 275
Y +G GGF V + G +VA+K K + + + E+ L + H+HI
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+L +V EY G L +I LS E V ++
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYI------------ISQDRLSEEETRVVFRQIVS 119
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
AVAY+HS HRD+K N+L D+ K+ DFG+ +K + T G+ Y
Sbjct: 120 AVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 396 DPEYFQS-SQFTDKSDVYSFGVVLLELLTGKKP 427
PE Q S ++DV+S G++L L+ G P
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVK--RSKEIDKTQIHQF-INEVVILSQINH 271
++++ R +G+GGFG VY D G + A+K K I Q +NE ++LS ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 272 RHIVKLLGCCLETEVP---VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
++ P + + ++ G L +H+ H S +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH------------GVFSEADMRF 296
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A E+ + +MH+ + +RD+K +NILLD+ ++SD G++ K H +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-- 351
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
GT GY+ PE Q D S D +S G +L +LL G P + +++ + +++A
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 448 KE 449
E
Sbjct: 411 VE 412
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVK--RSKEIDKTQIHQF-INEVVILSQINH 271
++++ R +G+GGFG VY D G + A+K K I Q +NE ++LS ++
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 272 RHIVKLLGCCLETEVP---VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
++ P + + ++ G L +H+ H S +
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH------------GVFSEADMRF 295
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A E+ + +MH+ + +RD+K +NILLD+ ++SD G++ K H +
Sbjct: 296 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-- 350
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
GT GY+ PE Q D S D +S G +L +LL G P + +++ + +++A
Sbjct: 351 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 448 KE 449
E
Sbjct: 410 VE 411
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKR---SKEIDKTQIHQ 258
A++F D+ ++ ++ R +G G FG VY + + +VA+K+ S + +
Sbjct: 44 AELFFKDDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD 100
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
I EV L ++ H + ++ GC L LV EY G+ S + H
Sbjct: 101 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLEVHKKPL-------- 151
Query: 319 SSLSWENRVRVACEVAGAV---AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
V +A GA+ AY+HS I HRD+K+ NILL + K+ DFG S
Sbjct: 152 ------QEVEIAAVTHGALQGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGDFG-SA 201
Query: 376 SIPNDKTHLTTTIQGTFGYLDPEY---FQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
SI GT ++ PE Q+ K DV+S G+ +EL K P+
Sbjct: 202 SI----MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARFYAA 149
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T T+ GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGT 202
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVK--RSKEIDKTQIHQF-INEVVILSQINH 271
++++ R +G+GGFG VY D G + A+K K I Q +NE ++LS ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 272 RHIVKLLGCCLETEVP---VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
++ P + + ++ G L +H+ H S +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH------------GVFSEADMRF 296
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A E+ + +MH+ + +RD+K +NILLD+ ++SD G++ K H +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-- 351
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
GT GY+ PE Q D S D +S G +L +LL G P + +++ + +++A
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 448 KE 449
E
Sbjct: 411 VE 412
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVK--RSKEIDKTQIHQF-INEVVILSQINH 271
++++ R +G+GGFG VY D G + A+K K I Q +NE ++LS ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 272 RHIVKLLGCCLETEVP---VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
++ P + + ++ G L +H+ H S +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH------------GVFSEADMRF 296
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A E+ + +MH+ + +RD+K +NILLD+ ++SD G++ K H +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-- 351
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
GT GY+ PE Q D S D +S G +L +LL G P + +++ + +++A
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 448 KE 449
E
Sbjct: 411 VE 412
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKG-MLPDGSIVAVKRSKEIDKT------QIHQFINEVVILSQ 268
+++ LG+G F VY+ + G VA+K IDK + + NEV I Q
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKM---IDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+ H I++L ++ LV E +G ++ ++ + EN R
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFS------------ENEAR 115
Query: 329 -VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI--PNDKTHLT 385
++ + Y+HS I HRD+ SN+LL + K++DFG++ + P++K +
Sbjct: 116 HFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY-- 170
Query: 386 TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVA 441
T+ GT Y+ PE S +SDV+S G + LL G+ P V+ N V
Sbjct: 171 -TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 240 GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTL 299
G VAVK+ + + NEVVI+ +H ++V + L + +V E++ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 300 SHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNIL 359
+ I H + ++ E V V A++Y+H+ + HRDIKS +IL
Sbjct: 130 TD-IVTH------------TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSIL 173
Query: 360 LDDKFSAKVSDFG----ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFG 415
L K+SDFG +S+ +P K + GT ++ PE + + D++S G
Sbjct: 174 LTSDGRIKLSDFGFCAQVSKEVPKRK-----XLVGTPYWMAPEVISRLPYGTEVDIWSLG 228
Query: 416 VVLLELLTGKKP 427
++++E++ G+ P
Sbjct: 229 IMVIEMIDGEPP 240
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARFYAA 134
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T T+ GT
Sbjct: 135 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGT 187
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKR---SKEIDKTQIHQ 258
A++F D+ ++ ++ R +G G FG VY + + +VA+K+ S + +
Sbjct: 5 AELFFKDDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD 61
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
I EV L ++ H + ++ GC L LV EY G+ S + H
Sbjct: 62 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLEVHKKPL-------- 112
Query: 319 SSLSWENRVRVACEVAGAV---AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
V +A GA+ AY+HS I HRD+K+ NILL + K+ DFG S
Sbjct: 113 ------QEVEIAAVTHGALQGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGDFG-SA 162
Query: 376 SIPNDKTHLTTTIQGTFGYLDPEY---FQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
SI GT ++ PE Q+ K DV+S G+ +EL K P+
Sbjct: 163 SIMAPANXFV----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 222 RFLGQGGFGTVYKGMLPDGS----IVAVKRSKEI-----DKTQIHQFINEVVILSQINHR 272
+ LGQG FG V+ GS + A+K K+ D+ + E IL ++NH
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM---ERDILVEVNHP 87
Query: 273 HIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
IVKL +TE + L+ +++ G L + + E+
Sbjct: 88 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVM------------FTEEDVKFYLA 134
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR-SIPNDKTHLTTTIQG 390
E+A A+ ++HS + I +RD+K NILLD++ K++DFG+S+ SI ++K + G
Sbjct: 135 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCG 189
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE T +D +SFGV++ E+LTG P
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 222 RFLGQGGFGTVYKGMLPDGS----IVAVKRSKEI-----DKTQIHQFINEVVILSQINHR 272
+ LGQG FG V+ GS + A+K K+ D+ + E IL ++NH
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM---ERDILVEVNHP 86
Query: 273 HIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
IVKL +TE + L+ +++ G L + + E+
Sbjct: 87 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVM------------FTEEDVKFYLA 133
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR-SIPNDKTHLTTTIQG 390
E+A A+ ++HS + I +RD+K NILLD++ K++DFG+S+ SI ++K + G
Sbjct: 134 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCG 188
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE T +D +SFGV++ E+LTG P
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 222 RFLGQGGFGTVYKGMLPDGS----IVAVKRSKEI-----DKTQIHQFINEVVILSQINHR 272
+ LGQG FG V+ GS + A+K K+ D+ + E IL ++NH
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM---ERDILVEVNHP 86
Query: 273 HIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
IVKL +TE + L+ +++ G L + + E+
Sbjct: 87 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVM------------FTEEDVKFYLA 133
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR-SIPNDKTHLTTTIQG 390
E+A A+ ++HS + I +RD+K NILLD++ K++DFG+S+ SI ++K + G
Sbjct: 134 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCG 188
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE T +D +SFGV++ E+LTG P
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 28 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 132
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D++ +V+DFG ++ + T +
Sbjct: 133 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXL 185
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 33/216 (15%)
Query: 224 LGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG+G +G VY G L + +A+K E D E+ + + H++IV+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSW----ENRVRVAC---EVAG 335
E + E + G+LS L W +N + ++
Sbjct: 90 ENGFIKIFMEQVPGGSLS----------------ALLRSKWGPLKDNEQTIGFYTKQILE 133
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ Y+H + I HRDIK N+L++ +S K+SDFG S+ + T T GT
Sbjct: 134 GLKYLHDNQ---IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTETFTGTLQ 188
Query: 394 YLDPEYFQSSQ--FTDKSDVYSFGVVLLELLTGKKP 427
Y+ PE + +D++S G ++E+ TGK P
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 45/239 (18%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
R ++ + LGQG FG V K D A+K+ + ++ ++ ++EV +L+ +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNH 61
Query: 272 RHIVKLLGCCLETEVPV-------------LVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
+++V+ LE V + EY + TL IH
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY--- 118
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGI----- 373
W R+ ++ A++Y+HS I HR++K NI +D+ + K+ DFG+
Sbjct: 119 ----W----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVH 167
Query: 374 ---------SRSIPNDKTHLTTTIQGTFGYLDPEYFQ-SSQFTDKSDVYSFGVVLLELL 422
S+++P +LT+ I GT Y+ E + + +K D YS G++ E +
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 213 RATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSKEID-----KTQIHQFINEVVIL 266
RA D Y +G G +G K DG I+ K E+D + + ++EV +L
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLL 59
Query: 267 SQINHRHIVKLLGCCLETEVPVL--VYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
++ H +IV+ ++ L V EY G L+ I L E
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--------TKGTKERQYLDEE 111
Query: 325 NRVRVACEVAGAVAYMH--SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+RV ++ A+ H S + HRD+K +N+ LD K + K+ DFG++R I N T
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDT 170
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLEL 421
GT Y+ PE + +KSD++S G +L EL
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 33/216 (15%)
Query: 224 LGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG+G +G VY G L + +A+K E D E+ + + H++IV+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSW----ENRVRVAC---EVAG 335
E + E + G+LS L W +N + ++
Sbjct: 76 ENGFIKIFMEQVPGGSLS----------------ALLRSKWGPLKDNEQTIGFYTKQILE 119
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ Y+H + I HRDIK N+L++ +S K+SDFG S+ + T T GT
Sbjct: 120 GLKYLHDNQ---IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTETFTGTLQ 174
Query: 394 YLDPEYFQSSQ--FTDKSDVYSFGVVLLELLTGKKP 427
Y+ PE + +D++S G ++E+ TGK P
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 95/236 (40%), Gaps = 49/236 (20%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIV 275
++ + +G GGFG V+K DG ++R K + EV L++++H +IV
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK----YNNEKAEREVKALAKLDHVNIV 68
Query: 276 KLLGCC-------------LE----------------TEVPVLVYEYISSGTLSHHIHDH 306
GC LE T+ + E+ GTL I
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 307 XXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA 366
+ + ++ V Y+HS + HRD+K SNI L D
Sbjct: 129 RGEKLDKVLA----------LELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQV 175
Query: 367 KVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELL 422
K+ DFG+ S+ ND T +GT Y+ PE S + + D+Y+ G++L ELL
Sbjct: 176 KIGDFGLVTSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 42 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 146
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 147 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 199
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSKEIDKT-QIHQFINEVVILSQ 268
+N + LG G FG V + G+ + ++ VAVK K + ++E+ I+S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 269 IN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS------- 320
+ H +IV LLG C +++ EY G L + +
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 321 ----LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS 376
L + + + +VA +A++ S I HRD+ + N+LL + AK+ DFG++R
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 377 IPNDKTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT 423
I ND ++ + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 204 KVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEV 263
K + D + ++ + LG G FG V+ + VAVK K + F+ E
Sbjct: 170 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEA 228
Query: 264 VILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
++ + H +VKL T+ P+ ++ E+++ G+L + L L
Sbjct: 229 NVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQP-----LPKL- 280
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+ + ++A +A++ I HRD++++NIL+ K++DFG++R
Sbjct: 281 ----IDFSAQIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLAR------- 326
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPI-CFARVEEERNLV 440
+ + PE FT KSDV+SFG++L+E++T G+ P + E R L
Sbjct: 327 ---VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 383
Query: 441 ACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
+ EN E+ + + MRC + ++RPT + + L+
Sbjct: 384 RGYRMPRPENCPEELYN-----------------IMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 224 LGQGGFGTVYKGMLP-DGSIVAVKR----SKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
LG+GGFG V++ D A+KR ++E+ + ++ + EV L+++ H IV+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKV---MREVKALAKLEHPGIVRYF 69
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-----EV 333
LE + SS + +I + E R R C ++
Sbjct: 70 NAWLEKNTTEKLQP--SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLT-------- 385
A AV ++HS + HRD+K SNI KV DFG+ ++ D+ T
Sbjct: 128 AEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 386 ---TTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELL 422
T GT Y+ PE + ++ K D++S G++L ELL
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 215 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y R LG+G FG V K + ++ + + + KT + EV +L Q++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +I+KL + LV E + G L I S + R+
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARII 138
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTT 387
+V + YMH + I HRD+K N+LL+ K + ++ DFG+S K
Sbjct: 139 RQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 195
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + +K DV+S GV+L LL+G P
Sbjct: 196 --GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 25/220 (11%)
Query: 215 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y R LG+G FG V K + ++ + + + KT + EV +L Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +I+KL + LV E + G L I S + R+
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARII 132
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTT 387
+V + YMH + I HRD+K N+LL+ K + ++ DFG+S K +
Sbjct: 133 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDK 188
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
I GT Y+ PE + + +K DV+S GV+L LL+G P
Sbjct: 189 I-GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 29/247 (11%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSK--EIDKTQIHQFINEVVILSQ 268
Q + Y + +G+G +G VYK G IVA+KR + D+ I E+ +L +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
++H +IV L+ LV+E++ L + ++ +++++
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ------------DSQIK 122
Query: 329 VAC-EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHL 384
+ ++ VA+ H I HRD+K N+L++ + K++DFG++R+ IP TH
Sbjct: 123 IYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 385 TTTIQGTFGYLDPEYFQSS-QFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACF 443
T+ Y P+ S +++ D++S G + E++TGK F V ++ L F
Sbjct: 180 VVTLW----YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP--LFPGVTDDDQLPKIF 233
Query: 444 ISLAKEN 450
L N
Sbjct: 234 SILGTPN 240
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 29/247 (11%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSK--EIDKTQIHQFINEVVILSQ 268
Q + Y + +G+G +G VYK G IVA+KR + D+ I E+ +L +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
++H +IV L+ LV+E++ L + ++ +++++
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ------------DSQIK 122
Query: 329 VAC-EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHL 384
+ ++ VA+ H I HRD+K N+L++ + K++DFG++R+ IP TH
Sbjct: 123 IYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 385 TTTIQGTFGYLDPEYFQSS-QFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACF 443
T+ Y P+ S +++ D++S G + E++TGK F V ++ L F
Sbjct: 180 VVTLW----YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP--LFPGVTDDDQLPKIF 233
Query: 444 ISLAKEN 450
L N
Sbjct: 234 SILGTPN 240
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY++ G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 46/300 (15%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFI--NEVVILSQI 269
++ + Y +G+G +G V K D G IVA+K+ E D ++ + I E+ +L Q+
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H ++V LL C + + LV+E++ H I D + L ++ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVD-----HTILDDLELFP-------NGLDYQVVQKY 129
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ 389
++ + + HS I HRDIK NIL+ K+ DFG +R++ +
Sbjct: 130 LFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV- 185
Query: 390 GTFGYLDPEYFQSS-QFTDKSDVYSFGVVLLELLTGKKPI--CFARVEEERNLVACFISL 446
T Y PE ++ DV++ G ++ E+ G +P+ + +++ +++ C +L
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNL 244
Query: 447 AKENQLL------------------EILDARVAKEAREEDIGAMAELAMRCLRLNSKKRP 488
+Q L E L+ R K + + +LA +CL ++ KRP
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSE-----VVIDLAKKCLHIDPDKRP 299
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 35/225 (15%)
Query: 215 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y R LG+G FG V K + ++ + + + KT + EV +L Q++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +I+KL + LV E + G L I S + R+
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARII 155
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTT 387
+V + YMH + I HRD+K N+LL+ K + ++ DFG+S TH +
Sbjct: 156 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEAS 205
Query: 388 IQ-----GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + + +K DV+S GV+L LL+G P
Sbjct: 206 KKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 206 FTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKE-IDKTQIHQFINEV 263
FTA++L+ + +G+G +G+V K + P G I+AVKR + +D+ + Q + ++
Sbjct: 19 FTAEDLKDLGE-------IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL 71
Query: 264 -VILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
V++ + +IV+ G + E +S+ + + + L ++
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+A A H ++ I HRDIK SNILLD + K+ DFGIS + + +
Sbjct: 132 ----------LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--S 179
Query: 383 HLTTTIQGTFGYLDPEYFQSSQ----FTDKSDVYSFGVVLLELLTGKKP 427
T G Y+ PE S + +SDV+S G+ L EL TG+ P
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 215 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y R LG+G FG V K + ++ + + + KT + EV +L Q++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +I+KL + LV E + G L I S + R+
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARII 156
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTT 387
+V + YMH + I HRD+K N+LL+ K + ++ DFG+S TH +
Sbjct: 157 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEAS 206
Query: 388 IQ-----GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFA 431
+ GT Y+ PE + + +K DV+S GV+L LL+G P A
Sbjct: 207 KKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGA 254
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSKEIDKTQIHQFINEVVI 265
+++ +++ + LG+G FG V+ +I A+K+ + + + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 266 LSQINHRHIVKLLGCCLET-EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
LS + + C +T E V EY++ G L +HI LS ++
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-------SCHKFDLSRATF- 123
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR-SIPNDKTH 383
A E+ + ++HS I +RD+K NILLD K++DFG+ + ++ D
Sbjct: 124 ----YAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK- 175
Query: 384 LTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T GT Y+ PE ++ D +SFGV+L E+L G+ P
Sbjct: 176 -TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID---KTQIHQFINEVVILSQINHRHIVKLLGC 280
LG G FG VYK + S++A +K ID + ++ ++ E+ IL+ +H +IVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 281 CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAGAVAY 339
++ E+ + G + L E++++V C + A+ Y
Sbjct: 103 FYYENNLWILIEFCAGGAVD------------AVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ------GTFG 393
+H + I HRD+K+ NIL K++DFG+S T TIQ GT
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRTIQRRDSFIGTPY 200
Query: 394 YLDPEYFQSSQFTD-----KSDVYSFGVVLLELLTGKKP 427
++ PE D K+DV+S G+ L+E+ + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + +G G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + KV+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL C + E Y +G L +I + S
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 144
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 145 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARFYAA 149
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 202
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 222 RFLGQGGFGTVYKGMLPDGSI---VAVKRSKEI--DKTQIHQFINEVVILSQINHRHIVK 276
+ +G+G FG V + V V + K I K + H V+L + H +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 277 LLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-ACEVAG 335
L + V +YI+ G L +H+ E R R A E+A
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFL-------------EPRARFYAAEIAS 150
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR-SIPNDKTHLTTTIQGTFGY 394
A+ Y+HS + I +RD+K NILLD + ++DFG+ + +I ++ T T+T GT Y
Sbjct: 151 ALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEY 205
Query: 395 LDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
L PE + D + G VL E+L G P
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 222 RFLGQGGFGTVY---KGMLPD-GSIVAVKRSKEI-----DKTQIHQFINEVVILSQINHR 272
+ LGQG FG V+ K PD G + A+K K+ D+ + E IL+ +NH
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM---ERDILADVNHP 90
Query: 273 HIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL +TE + L+ +++ G L + + E+
Sbjct: 91 FVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVM------------FTEEDVKFYLA 137
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR-SIPNDKTHLTTTIQG 390
E+A + ++HS + I +RD+K NILLD++ K++DFG+S+ +I ++K + G
Sbjct: 138 ELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK--AYSFCG 192
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE + +D +S+GV++ E+LTG P
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFAEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 20/219 (9%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQ 268
R Y + RFLG+GGF Y+ D V V +S + Q + E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+++ H+V G + + +V E +L +H + E R
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRK----------AVTEPEARYF 147
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
+ + G V Y+H++ + HRD+K N+ L+D K+ DFG++ I D T+
Sbjct: 148 MRQTIQG-VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKTL 202
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + D++S G +L LL GK P
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+++D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 30/221 (13%)
Query: 223 FLGQGGFGTVYKGM-LPDGSIVAVKRSKEI--DKTQIHQFINEVVILSQINHRHIVKLLG 279
+G G +G VYKG + G + A+K ++ +I Q IN + S +HR+I G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS--HHRNIATYYG 88
Query: 280 CCLETEVP------VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
++ P LV E+ +G+++ I + ++L E + E+
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG----------NTLKEEWIAYICREI 138
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
++++H + HRDIK N+LL + K+ DFG+S + T I GT
Sbjct: 139 LRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPY 194
Query: 394 YLDPEYFQSSQFTD-----KSDVYSFGVVLLELLTGKKPIC 429
++ PE + D KSD++S G+ +E+ G P+C
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + +G G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + KV+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + +G G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + KV+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ ++ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 213 RATDNYNQSRFLGQGGFG-TVYKGMLPDGSIVAVKR-------SKEIDKTQIHQFINEVV 264
++ + Y + + +G+G FG + DG +K SKE ++++ EV
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESR-----REVA 75
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+L+ + H +IV+ E +V +Y G L I+ L W
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI----LDW- 130
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
++ A+ ++H I HRDIKS NI L + ++ DFGI+R + N L
Sbjct: 131 -----FVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVEL 181
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
GT YL PE ++ + +KSD+++ G VL EL T K
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + S +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARF 146
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 147 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 199
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + S +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + S +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + S +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARF 146
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 147 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 199
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFXEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + S +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + S +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARF 146
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 147 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 199
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 23/232 (9%)
Query: 202 RAKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSI---VAVKRSKEIDKTQIHQ 258
R F + + +DNY+ LG+G F V + + + + +K++ +
Sbjct: 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK 74
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
E I ++ H +IV+L E LV++ ++ G L I
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI------------VAR 122
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF---SAKVSDFGISR 375
S + ++ ++AY HS+ I HR++K N+LL K + K++DFG++
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Query: 376 SIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ ND + GT GYL PE + ++ D+++ GV+L LL G P
Sbjct: 180 EV-ND-SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 62 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + S +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARF 166
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 167 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 219
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFXEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFXEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+++D + KV+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + S +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFSEPHARF 138
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 139 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 191
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 36 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + +
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFXEPHARF 140
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 141 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 193
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFXEPHARF 166
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 167 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 219
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSKEIDKTQIHQFINEVVI 265
+++ +++ + LG+G FG V+ +I A+K+ + + + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 266 LSQINHRHIVKLLGCCLET-EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
LS + + C +T E V EY++ G L +HI LS ++
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-------SCHKFDLSRATF- 122
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR-SIPNDKTH 383
A E+ + ++HS I +RD+K NILLD K++DFG+ + ++ D
Sbjct: 123 ----YAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK- 174
Query: 384 LTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T GT Y+ PE ++ D +SFGV+L E+L G+ P
Sbjct: 175 -TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 213 RATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSKEID-----KTQIHQFINEVVIL 266
RA D Y +G G +G K DG I+ K E+D + + ++EV +L
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLL 59
Query: 267 SQINHRHIVKLLGCCLETEVPVL--VYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
++ H +IV+ ++ L V EY G L+ I L E
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--------TKGTKERQYLDEE 111
Query: 325 NRVRVACEVAGAVAYMH--SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
+RV ++ A+ H S + HRD+K +N+ LD K + K+ DFG++R + +D+
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLEL 421
GT Y+ PE + +KSD++S G +L EL
Sbjct: 172 -FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 222 RFLGQGGFGTVYK----GMLPDGSIVAVKRSKEI----DKTQIHQFINEVVILSQINHRH 273
R LG+GG+G V++ G I A+K K+ + E IL ++ H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV L+ L+ EY+S G L + L+ E+
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA------------EI 130
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ A+ ++H I +RD+K NI+L+ + K++DFG+ + +D T +T T GT
Sbjct: 131 SMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIE 186
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
Y+ PE S D +S G ++ ++LTG P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSKEIDKTQIHQFINEVV---ILSQINH 271
D + R LG+GGFG V+ M G + A K+ + + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 272 RHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
R IV L ET+ + LV ++ G + +HI++ +
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN--------PGFQEPRAIFYT 295
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
++ + ++H I +RD+K N+LLDD + ++SD G++ + +T T G
Sbjct: 296 AQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAG 351
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERN 438
T G++ PE ++ D ++ GV L E++ + P AR E+ N
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR-ARGEKVEN 398
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSKEIDKTQIHQFINEVV---ILSQINH 271
D + R LG+GGFG V+ M G + A K+ + + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 272 RHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
R IV L ET+ + LV ++ G + +HI++ +
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN--------PGFQEPRAIFYT 295
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
++ + ++H I +RD+K N+LLDD + ++SD G++ + +T T G
Sbjct: 296 AQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAG 351
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERN 438
T G++ PE ++ D ++ GV L E++ + P AR E+ N
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR-ARGEKVEN 398
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSKEIDKTQIHQFINEVV---ILSQINH 271
D + R LG+GGFG V+ M G + A K+ + + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 272 RHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
R IV L ET+ + LV ++ G + +HI++ +
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN--------PGFQEPRAIFYT 295
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
++ + ++H I +RD+K N+LLDD + ++SD G++ + +T T G
Sbjct: 296 AQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAG 351
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERN 438
T G++ PE ++ D ++ GV L E++ + P AR E+ N
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR-ARGEKVEN 398
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSKEIDKTQIHQFINEVV---ILSQINH 271
D + R LG+GGFG V+ M G + A K+ + + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 272 RHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
R IV L ET+ + LV ++ G + +HI++ +
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN--------PGFQEPRAIFYT 295
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
++ + ++H I +RD+K N+LLDD + ++SD G++ + +T T G
Sbjct: 296 AQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAG 351
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERN 438
T G++ PE ++ D ++ GV L E++ + P AR E+ N
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR-ARGEKVEN 398
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID---KTQIHQFINEVVILSQINHRHIVKLLGC 280
LG G FG VYK + S++A +K ID + ++ ++ E+ IL+ +H +IVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 281 CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAGAVAY 339
++ E+ + G + L E++++V C + A+ Y
Sbjct: 103 FYYENNLWILIEFCAGGAVD------------AVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGIS----RSIPNDKTHLTTTIQGTFGYL 395
+H + I HRD+K+ NIL K++DFG+S R I + + GT ++
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWM 202
Query: 396 DPEYFQSSQFTD-----KSDVYSFGVVLLELLTGKKP 427
PE D K+DV+S G+ L+E+ + P
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL P S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY G + H+ + S +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFSEPHARF 146
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+++D + KV+DFG ++ + T +
Sbjct: 147 YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXL 199
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + +I +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+++D + KV+DFG+++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + + A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFXEPHARFYAA 149
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 202
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 217 NYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHR 272
++N LG+G FG V KG +I +K+ I + + E +L+ ++
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 273 HIVKLLGCCLET-EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+ L C +T + V EY++ G L +HI + V A
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ------------QVGKFKEPQAVFYAA 127
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
E++ + ++H I +RD+K N++LD + K++DFG+ + D T GT
Sbjct: 128 EISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTREFCGT 183
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
Y+ PE + D +++GV+L E+L G+ P
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFXEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + R LG G FG V ML G+ A+K + K + QI +NE I
Sbjct: 42 DQFERIRTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY G + H+ + S +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR------------RIGRFSEPHARF 146
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + KV+DFG ++ + T +
Sbjct: 147 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXL 199
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY+ G + H+ + + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFXEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 45/238 (18%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEI--DKTQIHQFINEVVILSQIN-HRH 273
Y + LG+G +G V+K + G +VAVK+ + + T + E++IL++++ H +
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 274 IVKLLGCC-LETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
IV LL + + V LV++Y+ + +H + L ++ V
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETD-----LH---------AVIRANILEPVHKQYVVY 116
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN------------ 379
++ + Y+HS + HRD+K SNILL+ + KV+DFG+SRS N
Sbjct: 117 QLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSI 173
Query: 380 --------DKTHLTTTIQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
D + T T Y PE S+++T D++S G +L E+L G KPI
Sbjct: 174 NENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 20/219 (9%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQ 268
R Y + RFLG+GGF Y+ D V V +S + Q + E+ I
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+++ H+V G + + +V E +L +H + E R
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRK----------AVTEPEARYF 131
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
+ + G V Y+H++ I HRD+K N+ L+D K+ DFG++ I D +
Sbjct: 132 MRQTIQG-VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDL 186
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + D++S G +L LL GK P
Sbjct: 187 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 39/219 (17%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEID---KTQIHQFINEVVILSQINHRHIVKLLGC 280
LG G FG VYK + S++A +K ID + ++ ++ E+ IL+ +H +IVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 281 CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAGAVAY 339
++ E+ + G + L E++++V C + A+ Y
Sbjct: 103 FYYENNLWILIEFCAGGAVD------------AVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ------GTFG 393
+H + I HRD+K+ NIL K++DFG+S T IQ GT
Sbjct: 151 LHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDXFIGTPY 200
Query: 394 YLDPEYFQSSQFTD-----KSDVYSFGVVLLELLTGKKP 427
++ PE D K+DV+S G+ L+E+ + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGSI---VAVKRSKEIDKTQIHQFINEVVILSQINH 271
+DNY+ LG+G F V + + + + +K++ + E I ++ H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+IV+L E LV++ ++ G L I +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ------------ 112
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF---SAKVSDFGISRSIPNDKTHLTTTI 388
++ ++AY HS+ I HR++K N+LL K + K++DFG++ + ND +
Sbjct: 113 QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-ND-SEAWHGF 167
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GYL PE + ++ D+++ GV+L LL G P
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGSI---VAVKRSKEIDKTQIHQFINEVVILSQINH 271
+DNY+ LG+G F V + + + + +K++ + E I ++ H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+IV+L E LV++ ++ G L I +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ------------ 111
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF---SAKVSDFGISRSIPNDKTHLTTTI 388
++ ++AY HS+ I HR++K N+LL K + K++DFG++ + ND +
Sbjct: 112 QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-ND-SEAWHGF 166
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GYL PE + ++ D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 20/219 (9%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQ 268
R Y + RFLG+GGF Y+ D V V +S + Q + E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+++ H+V G + + +V E +L +H + E R
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRK----------AVTEPEARYF 147
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
+ + G V Y+H++ + HRD+K N+ L+D K+ DFG++ I D +
Sbjct: 148 MRQTIQG-VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXL 202
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + D++S G +L LL GK P
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 27/241 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRH 273
+ Y+ +G+G +G VYK G A+K R ++ D+ I E+ IL ++ H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IVKL + VLV+E H+ L S++ ++ + ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFL---LQL 109
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDK-THLTTTIQG 390
+AY H + HRD+K N+L++ + K++DFG++R+ IP K TH T+
Sbjct: 110 LNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW- 165
Query: 391 TFGYLDPEYFQSS-QFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE 449
Y P+ S +++ D++S G + E++ G F V E L+ F L
Sbjct: 166 ---YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP--LFPGVSEADQLMRIFRILGTP 220
Query: 450 N 450
N
Sbjct: 221 N 221
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 27/241 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRH 273
+ Y+ +G+G +G VYK G A+K R ++ D+ I E+ IL ++ H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IVKL + VLV+E H+ L S++ ++ + ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFL---LQL 109
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDK-THLTTTIQG 390
+AY H + HRD+K N+L++ + K++DFG++R+ IP K TH T+
Sbjct: 110 LNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW- 165
Query: 391 TFGYLDPEYFQSS-QFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE 449
Y P+ S +++ D++S G + E++ G F V E L+ F L
Sbjct: 166 ---YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAP--LFPGVSEADQLMRIFRILGTP 220
Query: 450 N 450
N
Sbjct: 221 N 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGSI---VAVKRSKEIDKTQIHQFINEVVILSQINH 271
+DNY+ LG+G F V + + + + +K++ + E I ++ H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+IV+L E LV++ ++ G L I S +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDI------------VAREFYSEADASHCIQ 112
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF---SAKVSDFGISRSIPNDKTHLTTTI 388
++ ++AY HS+ I HR++K N+LL K + K++DFG++ + ND +
Sbjct: 113 QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-ND-SEAWHGF 167
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GYL PE + ++ D+++ GV+L LL G P
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 19/219 (8%)
Query: 222 RFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQI--HQFINEVVILSQINHRHIVKLLG 279
R LG G FG V+ + V ++ D++Q+ Q E+ +L ++H +I+K+
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
+ +V E G L I +LS + ++ A+AY
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERI--------VSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 340 MHSSASIPIFHRDIKSSNILLDD---KFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLD 396
HS + H+D+K NIL D K+ DFG++ +D+ +T GT Y+
Sbjct: 140 FHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMA 194
Query: 397 PEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEE 435
PE F+ T K D++S GVV+ LLTG P +EE
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE 232
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 20/219 (9%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQ 268
R Y + RFLG+GGF Y+ D V V +S + Q + E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+++ H+V G + + +V E +L +H + E R
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRK----------AVTEPEARYF 147
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
+ + G V Y+H++ + HRD+K N+ L+D K+ DFG++ I D +
Sbjct: 148 MRQTIQG-VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDL 202
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + D++S G +L LL GK P
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+++D + +V+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 224 LGQGGFGTV-----YKGMLPDGSIVAVK--RSKEIDKTQIHQFIN-EVVILSQINHRHIV 275
LG+G FG V YK VA+K + + K+ +H + E+ L + H HI+
Sbjct: 17 LGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
KL V+V EY + G L +I + ++ + R ++
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEK------------KRMTEDEGRRFFQQIIC 119
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
A+ Y H I HRD+K N+LLDD + K++DFG+S +I D L T+ G+ Y
Sbjct: 120 AIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYA 174
Query: 396 DPEYFQSSQFT-DKSDVYSFGVVLLELLTGKKP 427
PE + + DV+S G+VL +L G+ P
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+ KL + +V EY G + H+ + S + A
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFSEPHARFYAA 149
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+++D + KV+DFG ++ + T + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 202
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 213 RATDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSK------EIDKTQIHQF--- 259
+ ++Y + R LG G +G V K + +I +K+S+ D I +F
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 260 -INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
NE+ +L ++H +I+KL + + LV E+ G L I +
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC------ 146
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISR 375
+ + ++ + Y+H I HRDIK NILL++K + K+ DFG+S
Sbjct: 147 ------DAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197
Query: 376 SIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
D + GT Y+ PE + ++ +K DV+S GV++ LL G P
Sbjct: 198 FFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+ KL + +V EY G + H+ + S + A
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFSEPHARFYAA 149
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+++D + KV+DFG ++ + T + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 202
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRK------------IGSFDETCTRFYTA 139
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K + G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE + SD+++ G ++ +L+ G P
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYK---GMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHR 272
+ YN LG+G FG V K + V V + EV +L +++H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+I+KL ++ +V E + G L I S + R+ +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEI------------IKRKRFSEHDAARIIKQ 129
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKF---SAKVSDFGISRSIPNDKTHLTTTIQ 389
V + YMH I HRD+K NILL+ K K+ DFG+S + T + I
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + + +K DV+S GV+L LL+G P
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 40/276 (14%)
Query: 227 GGFGTVYKGMLPDGSIVAVKRSKEID---KTQIHQFINEVVILSQINHRHIVKLLGCCLE 283
G FG VYK + S++A +K ID + ++ ++ E+ IL+ +H +IVKLL
Sbjct: 21 GDFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 284 TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC-EVAGAVAYMHS 342
++ E+ + G + L E++++V C + A+ Y+H
Sbjct: 79 ENNLWILIEFCAGGAVD------------AVMLELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 343 SASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS 402
+ I HRD+K+ NIL K++DFG+S + GT ++ PE
Sbjct: 127 NK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 403 SQFTD-----KSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILD 457
D K+DV+S G+ L+E+ + P E N + + +AK
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEMAEIEPP------HHELNPMRVLLKIAKSEP------ 231
Query: 458 ARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+A+ +R + +CL N R T Q+
Sbjct: 232 PTLAQPSRWS--SNFKDFLKKCLEKNVDARWTTSQL 265
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 27/241 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRH 273
+ Y+ +G+G +G VYK G A+K R ++ D+ I E+ IL ++ H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IVKL + VLV+E H+ L S++ ++ + ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFL---LQL 109
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDK-THLTTTIQG 390
+AY H + HRD+K N+L++ + K++DFG++R+ IP K TH T+
Sbjct: 110 LNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLW- 165
Query: 391 TFGYLDPEYFQSS-QFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE 449
Y P+ S +++ D++S G + E++ G F V E L+ F L
Sbjct: 166 ---YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP--LFPGVSEADQLMRIFRILGTP 220
Query: 450 N 450
N
Sbjct: 221 N 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFI--NEVVILSQINHR 272
+ Y + +G+G +G V+K D G IVA+K+ E + + + I E+ +L Q+ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
++V LL LV+EY L H+ + S++W+
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVKSITWQT------- 111
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
AV + H I HRD+K NIL+ K+ DFG +R + + + T
Sbjct: 112 -LQAVNFCHKHNCI---HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATR 166
Query: 393 GYLDPEYF-QSSQFTDKSDVYSFGVVLLELLTG 424
Y PE +Q+ DV++ G V ELL+G
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 262 EVVILSQI-NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
E IL Q+ H HI+ L+ + LV++ + G L ++ + + S
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PN 379
L AV+++H++ I HRD+K NILLDD ++SDFG S + P
Sbjct: 209 L------------LEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG 253
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQ------FTDKSDVYSFGVVLLELLTGKKPICFAR 432
+K + GT GYL PE + S + + D+++ GV+L LL G P R
Sbjct: 254 EKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 31/237 (13%)
Query: 207 TADELQRATDNYNQSRF----------LGQGGFGTVY----KGMLPDGSIVAVKRSKEID 252
TA+ + + +N N+ R LG+G FG V KG ++ +K+ I
Sbjct: 322 TANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ 381
Query: 253 KTQIHQFINEVVILSQINHRHIVKLLGCCLET-EVPVLVYEYISSGTLSHHIHDHXXXXX 311
+ + E +L+ + L C +T + V EY++ G L +HI
Sbjct: 382 DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ------- 434
Query: 312 XXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDF 371
+ + V A E+A + ++ S I +RD+K N++LD + K++DF
Sbjct: 435 -----QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADF 486
Query: 372 GISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
G+ + D T GT Y+ PE + D ++FGV+L E+L G+ P
Sbjct: 487 GMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D +++ + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY++ G + H+ + S +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR------------RIGRFSEPHARF 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT L PE S + D ++ GV++ E+ G P
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY G + H+ + + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFXEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+++D + KV+DFG ++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-A 330
+ L + V EY + G L H+ E R R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYG 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
E+ A+ Y+HS + +RDIK N++LD K++DFG+ + +D + T G
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-KTFCG 167
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T YL PE + + + D + GVV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 216 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
D + + + LG G FG V ML G+ A+K + K + QI +NE IL
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+N +VKL + +V EY+ G + H+ + +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR------------RIGRFXEPHARF 138
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTI 388
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ + T +
Sbjct: 139 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 191
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE S + D ++ GV++ E+ G P
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-A 330
+ L + V EY + G L H+ E R R
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYG 114
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
E+ A+ Y+HS + +RDIK N++LD K++DFG+ + +D + T G
Sbjct: 115 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-KTFCG 170
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T YL PE + + + D + GVV+ E++ G+ P
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILS 267
++ +++ + LG+G F TV + +I +++ I + ++ E ++S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+++H VKL + E Y +G L +I + S
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTR 111
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTT 386
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K
Sbjct: 112 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT Y+ PE SD+++ G ++ +L+ G P
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYK---GMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHR 272
+ YN LG+G FG V K + V V + EV +L +++H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+I+KL ++ +V E + G L I S + R+ +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEI------------IKRKRFSEHDAARIIKQ 129
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTTIQ 389
V + YMH I HRD+K NILL+ K K+ DFG+S + T + I
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + + +K DV+S GV+L LL+G P
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYK---GMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHR 272
+ YN LG+G FG V K + V V + EV +L +++H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+I+KL ++ +V E + G L I S + R+ +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEI------------IKRKRFSEHDAARIIKQ 129
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTTIQ 389
V + YMH I HRD+K NILL+ K K+ DFG+S + T + I
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + + +K DV+S GV+L LL+G P
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILS 267
++ +++ + LG+G F TV + +I +++ I + ++ E ++S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+++H VKL + E Y +G L +I + S
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTR 113
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTT 386
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K
Sbjct: 114 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT Y+ PE SD+++ G ++ +L+ G P
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-A 330
+ L + V EY + G L H+ E R R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYG 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
E+ A+ Y+HS + +RDIK N++LD K++DFG+ + +D + T G
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-KTFCG 167
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T YL PE + + + D + GVV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 222 RFLGQGGFGTVYK----GMLPDGSIVAVKRSKEI----DKTQIHQFINEVVILSQINHRH 273
R LG+GG+G V++ G I A+K K+ + E IL ++ H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
IV L+ L+ EY+S G L + L+ E+
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA------------EI 130
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ A+ ++H I +RD+K NI+L+ + K++DFG+ + +D T +T GT
Sbjct: 131 SMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIE 186
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
Y+ PE S D +S G ++ ++LTG P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + +I +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+VKL + +V EY G + H+ + S + A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFSEPHARFYAA 148
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+++D + +V+DFG+++ + T + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGT 201
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILS 267
++ +++ + LG+G F TV + +I +++ I + ++ E ++S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+++H VKL + E Y +G L +I + S
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTR 112
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTT 386
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K
Sbjct: 113 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT Y+ PE SD+++ G ++ +L+ G P
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILS 267
++ +++ + LG+G F TV + +I +++ I + ++ E ++S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+++H VKL + E Y +G L +I + S
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTR 110
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTT 386
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K
Sbjct: 111 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT Y+ PE SD+++ G ++ +L+ G P
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 217 NYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHR 272
++N LG+G FG V KG ++ +K+ I + + E +L+
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 273 HIVKLLGCCLET-EVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+ L C +T + V EY++ G L +HI + + V A
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ------------QVGRFKEPHAVFYAA 128
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
E+A + ++ S I +RD+K N++LD + K++DFG+ + D T GT
Sbjct: 129 EIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGT 184
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
Y+ PE + D ++FGV+L E+L G+ P
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPDGSIVAVKR--SKEI--DKTQIHQFINEVVILSQINHR 272
+++ R +G+G + V L + R KE+ D I E + Q ++
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 273 HIVKLLGCCLETEVPVL-VYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+ L C +TE + V EY++ G L H+ L E+ +
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ------------RKLPEEHARFYSA 160
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQ 389
E++ A+ Y+H I +RD+K N+LLD + K++D+G+ + P D T +T
Sbjct: 161 EISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFC 214
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT Y+ PE + + D ++ GV++ E++ G+ P
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 25/220 (11%)
Query: 215 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y R LG+G FG V K + ++ + + + KT + EV +L Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +I KL + LV E + G L I S + R+
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI------------ISRKRFSEVDAARII 132
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTT 387
+V + Y H + I HRD+K N+LL+ K + ++ DFG+S K
Sbjct: 133 RQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI 189
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + + +K DV+S GV+L LL+G P
Sbjct: 190 --GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 136
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K + G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSKEIDKTQIHQFIN-EVVILSQINHR 272
NY + LG+G FG V G VA+K K + K+ + I E+ L + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
HI+KL + ++V EY + + + +S + R +
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR-------------DKMSEQEARRFFQQ 121
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
+ AV Y H I HRD+K N+LLD+ + K++DFG+S +I D L T+ G+
Sbjct: 122 IISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSP 176
Query: 393 GYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKP 427
Y PE + + DV+S GV+L +L + P
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSKEIDKTQIHQFIN-EVVILSQINHR 272
NY + LG+G FG V G VA+K K + K+ + I E+ L + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
HI+KL + ++V EY + + + +S + R +
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR-------------DKMSEQEARRFFQQ 111
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
+ AV Y H I HRD+K N+LLD+ + K++DFG+S +I D L T+ G+
Sbjct: 112 IISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSP 166
Query: 393 GYLDPEYFQSSQFT-DKSDVYSFGVVLLELLTGKKP 427
Y PE + + DV+S GV+L +L + P
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSKEIDKTQIHQFIN-EVVILSQINHR 272
NY + LG+G FG V G VA+K K + K+ + I E+ L + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
HI+KL + ++V EY + + + +S + R +
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR-------------DKMSEQEARRFFQQ 120
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
+ AV Y H I HRD+K N+LLD+ + K++DFG+S +I D L T+ G+
Sbjct: 121 IISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSP 175
Query: 393 GYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKP 427
Y PE + + DV+S GV+L +L + P
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 140
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K + G
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 16/243 (6%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQINH 271
++ + Q LG G + TVYKG+ G VA+K K + ++ I E+ ++ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+IV+L LV+E++ + + D L+ + +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYM--DSRTVGNTPRGLELNLVKY-----FQW 115
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ +A+ H + I HRD+K N+L++ + K+ DFG++R+ ++ + T
Sbjct: 116 QLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-T 171
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKEN 450
Y P+ S+ ++ D++S G +L E++TGK F +E L F + N
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP--LFPGTNDEEQLKLIFDIMGTPN 229
Query: 451 QLL 453
+ L
Sbjct: 230 ESL 232
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 109/258 (42%), Gaps = 29/258 (11%)
Query: 224 LGQGGFGTVYKGMLP-DGSIVAVK---RSKEIDKTQIHQFINEVVILSQINHRHIVKLLG 279
LG G FG V G G VAVK R K + + E+ L H HI+KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
+V EY+S G L +I H E R R+ ++ AV Y
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVE-----------EMEAR-RLFQQILSAVDY 126
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY 399
H + HRD+K N+LLD +AK++DFG+S + +D L T+ G+ Y PE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSC-GSPNYAAPEV 181
Query: 400 FQSSQFTD-KSDVYSFGVVLLELLTGKKPI-------CFARVEEERNLVACFISLAKENQ 451
+ + D++S GV+L LL G P F ++ + +++ +
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATL 241
Query: 452 LLEILDARVAKEAREEDI 469
L+ +L K A +DI
Sbjct: 242 LMHMLQVDPLKRATIKDI 259
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 137
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSKEIDKTQIHQFIN-EVVILSQINHR 272
NY + LG+G FG V G VA+K K + K+ + I E+ L + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
HI+KL + ++V EY + + + +S + R +
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR-------------DKMSEQEARRFFQQ 115
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
+ AV Y H I HRD+K N+LLD+ + K++DFG+S +I D L T+ G+
Sbjct: 116 IISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSP 170
Query: 393 GYLDPEYFQSSQFT-DKSDVYSFGVVLLELLTGKKP 427
Y PE + + DV+S GV+L +L + P
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 29/257 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 142
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 143 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP-------ICFAR-VEEERNLVAC 442
T Y+ PE SD+++ G ++ +L+ G P + F + ++ E + A
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAA 259
Query: 443 FISLAKE-NQLLEILDA 458
F A++ + L +LDA
Sbjct: 260 FFPKARDLVEKLLVLDA 276
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 22/234 (9%)
Query: 201 ERAKVFTADELQRATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQ 255
E +V A R T N + + LG+G FG V K ++ +K+ + K +
Sbjct: 132 EEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE 191
Query: 256 IHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+ + E +L H + L + V EY + G L H+
Sbjct: 192 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----- 246
Query: 316 XXLSSLSWENRVRV-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGIS 374
E+R R E+ A+ Y+HS ++ +RD+K N++LD K++DFG+
Sbjct: 247 --------EDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLC 296
Query: 375 RSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ D + T GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 297 KEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 139
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 139
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 139
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 22/234 (9%)
Query: 201 ERAKVFTADELQRATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQ 255
E +V A R T N + + LG+G FG V K ++ +K+ + K +
Sbjct: 135 EEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE 194
Query: 256 IHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+ + E +L H + L + V EY + G L H+
Sbjct: 195 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS----- 249
Query: 316 XXLSSLSWENRVRV-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGIS 374
E+R R E+ A+ Y+HS ++ +RD+K N++LD K++DFG+
Sbjct: 250 --------EDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLC 299
Query: 375 RSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
+ D + T GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 300 KEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 139
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 137
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 136
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 137
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 140
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 121
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 139
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 31/249 (12%)
Query: 202 RAKVFTADELQRATDNYNQSRFLGQGGFGTVYKGMLPDG-------SIVAVKRSKEIDKT 254
R T + +N+ + LG G +G V+ G ++ +K++ + K
Sbjct: 40 RTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA 99
Query: 255 QIHQFI-NEVVILSQINHRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXX 312
+ + E +L I + L +TE + L+ +YI+ G L H+
Sbjct: 100 KTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT-- 157
Query: 313 XXXXXLSSLSWENRVRV-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDF 371
E+ V++ E+ A+ ++H + I +RDIK NILLD ++DF
Sbjct: 158 -----------EHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDF 203
Query: 372 GISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFT-DKS-DVYSFGVVLLELLTGKKPIC 429
G+S+ D+T GT Y+ P+ + DK+ D +S GV++ ELLTG P
Sbjct: 204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
Query: 430 FARVEEERN 438
V+ E+N
Sbjct: 264 ---VDGEKN 269
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D + + + LG G FG V + G+ A+K + K + QI +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+ KL + +V EY G + H+ + + A
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR------------RIGRFXEPHARFYAA 149
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ Y+HS + + +RD+K N+++D + KV+DFG ++ + T + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 202
Query: 392 FGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
YL PE S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 38/258 (14%)
Query: 219 NQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHR 272
+++ LG G FG V+K G+ I+ + K DK ++ NE+ +++Q++H
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK--DKEEVK---NEISVMNQLDHA 146
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
++++L VLV EY+ G L I D L+ L ++ CE
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE--------SYNLTELDTILFMKQICE 198
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILL--DDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
+ +MH + I H D+K NIL D K+ DFG++R P +K +
Sbjct: 199 ---GIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF--- 249
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFAR-VEEERNLVACFISLAK 448
GT +L PE + +D++S GV+ LL+G P E N++AC L
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 449 ENQLLEILDARVAKEARE 466
E E D +++EA+E
Sbjct: 310 E----EFQD--ISEEAKE 321
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 38/218 (17%)
Query: 226 QGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLE-T 284
+G FG V+K L + VAVK DK Q Q EV L + H +I++ +G T
Sbjct: 34 RGRFGCVWKAQLLN-EYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 285 EVPV---LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
V V L+ + G+LS + + +SW +A +A +AY+H
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL-------------KANVVSWNELCHIAETMARGLAYLH 138
Query: 342 SSASIP---------IFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ-GT 391
IP I HRDIKS N+LL + +A ++DFG++ K+ T Q GT
Sbjct: 139 ED--IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGT 196
Query: 392 FGYLDPEY------FQSSQFTDKSDVYSFGVVLLELLT 423
Y+ PE FQ F + D+Y+ G+VL EL +
Sbjct: 197 RRYMAPEVLEGAINFQRDAFL-RIDMYAMGLVLWELAS 233
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 22/218 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-A 330
+ L + V EY + G L H+ E R R
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYG 116
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
E+ A+ Y+HS + +RDIK N++LD K++DFG+ + +D + G
Sbjct: 117 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-KXFCG 172
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T YL PE + + + D + GVV+ E++ G+ P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 20/218 (9%)
Query: 216 DNYNQSRFLGQGGFGT-VYKGMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
+++ + LG+G F T V L A+K + I + ++ E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
VKL + E Y +G L +I + S
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK------------IGSFDETCTRFYTA 137
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQG 390
E+ A+ Y+H I HRD+K NILL++ +++DFG ++ + P K G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y+ PE SD+++ G ++ +L+ G P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 25/239 (10%)
Query: 224 LGQGGFGTVYKGM--LPDGSIVAVKRSK-EIDKTQIHQFINEVVILSQINHRHIVKLLGC 280
LG+G + TVYKG L D ++VA+K + E ++ I EV +L + H +IV L
Sbjct: 10 LGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 281 CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYM 340
+ LV+EY+ L ++ D + ++ N ++ +AY
Sbjct: 69 IHTEKSLTLVFEYLDKD-LKQYLDDCG-----------NIINMHNVKLFLFQLLRGLAYC 116
Query: 341 HSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR--SIPNDKTHLTTTIQGTFGYLDPE 398
H + HRD+K N+L++++ K++DFG++R SIP KT+ + T Y P+
Sbjct: 117 HRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYDNEVV--TLWYRPPD 170
Query: 399 -YFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEIL 456
S+ ++ + D++ G + E+ TG+ + VEE+ + + + E IL
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 34/235 (14%)
Query: 209 DELQ-RATDNYNQSRFL------GQGGFGTVYKGMLPDGSIVAVK---RSKEIDKTQIHQ 258
+EL+ +A N RFL G+G F TVYKG+ + ++ + +++ K++ +
Sbjct: 12 EELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR 71
Query: 259 FINEVVILSQINHRHIVKLLGCCLET----EVPVLVYEYISSGTLSHHIHDHXXXXXXXX 314
F E L + H +IV+ T + VLV E +SGTL ++
Sbjct: 72 FKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV- 130
Query: 315 XXXLSSLSWENRVRVAC-EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF-SAKVSDFG 372
+R C ++ + ++H+ PI HRD+K NI + S K+ D G
Sbjct: 131 ------------LRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLG 177
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
++ + + GT + PE ++ ++ + DVY+FG LE T + P
Sbjct: 178 LATL---KRASFAKAVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 22/218 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-A 330
+ L + V EY + G L H+ E R R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYG 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
E+ A+ Y+HS + +RDIK N++LD K++DFG+ + +D + G
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-KXFCG 167
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T YL PE + + + D + GVV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINH 271
TD Y LG+G F V + M +P G A K +K++ + E I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+IV+L E LV++ ++ G L I S +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDI------------VAREYYSEADASHCIQ 110
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTTI 388
++ +V + H + I HRD+K N+LL K + K++DFG++ + D+
Sbjct: 111 QILESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGF 166
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GYL PE + + D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINH 271
TD Y LG+G F V + M +P G A K +K++ + E I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+IV+L E LV++ ++ G L I S +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDI------------VAREYYSEADASHCIQ 110
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTTI 388
++ +V + H + I HRD+K N+LL K + K++DFG++ + D+
Sbjct: 111 QILESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGF 166
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GYL PE + + D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 22/218 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-A 330
+ L + V EY + G L H+ E R R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYG 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
E+ A+ Y+HS + +RDIK N++LD K++DFG+ + +D + G
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-KXFCG 167
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T YL PE + + + D + GVV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 22/218 (10%)
Query: 216 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINH 271
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-A 330
+ L + V EY + G L H+ E R R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT-------------EERARFYG 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQG 390
E+ A+ Y+HS + +RDIK N++LD K++DFG+ + +D + G
Sbjct: 112 AEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-KXFCG 167
Query: 391 TFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T YL PE + + + D + GVV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSKEIDKTQIHQFINEVVILSQINHR 272
+++ R +G+G + V L ++ VK+ D I E + Q ++
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 273 HIVKLLGCCLETEVPVL-VYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+ L C +TE + V EY++ G L H+ L E+ +
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ------------RKLPEEHARFYSA 128
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQ 389
E++ A+ Y+H I +RD+K N+LLD + K++D+G+ + P D T +
Sbjct: 129 EISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFC 182
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT Y+ PE + + D ++ GV++ E++ G+ P
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 224 LGQGGFGTVY--KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCC 281
LG G F V+ K L G + A+K K+ + NE+ +L +I H +IV L
Sbjct: 17 LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
T LV + +S G L I + ++ V +V AV Y+H
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTE------------KDASLVIQQVLSAVKYLH 123
Query: 342 SSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE 398
+ I HRD+K N+L ++ ++DFG+S+ ++ + +T GT GY+ PE
Sbjct: 124 ENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPE 177
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
++ D +S GV+ LL G P
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 175
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 176 ----YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 229
Query: 449 ENQLL 453
++++
Sbjct: 230 PDEVV 234
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 ----YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 222
Query: 449 ENQLL 453
++++
Sbjct: 223 PDEVV 227
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGS----IVAVK-RSKEIDKTQIHQFINEVVILSQIN 270
D Y+ LG G F V +L + +VA+K +KE + + NE+ +L +I
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IV L L+ + +S G L I + + R+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------------RDASRLI 122
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNIL---LDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+V AV Y+H + I HRD+K N+L LD+ +SDFG+S+ D + +T
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLST 177
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 108/258 (41%), Gaps = 29/258 (11%)
Query: 224 LGQGGFGTVYKGMLP-DGSIVAVK---RSKEIDKTQIHQFINEVVILSQINHRHIVKLLG 279
LG G FG V G G VAVK R K + + E+ L H HI+KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
+V EY+S G L +I H E R R+ ++ AV Y
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVE-----------EMEAR-RLFQQILSAVDY 126
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY 399
H + HRD+K N+LLD +AK++DFG+S + +D L + G+ Y PE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSC-GSPNYAAPEV 181
Query: 400 FQSSQFTD-KSDVYSFGVVLLELLTGKKPI-------CFARVEEERNLVACFISLAKENQ 451
+ + D++S GV+L LL G P F ++ + +++ +
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATL 241
Query: 452 LLEILDARVAKEAREEDI 469
L+ +L K A +DI
Sbjct: 242 LMHMLQVDPLKRATIKDI 259
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 175
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 176 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 229
Query: 449 ENQLL 453
++++
Sbjct: 230 PDEVV 234
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 245 VKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIH 304
V ++ID Q + + E NH +V L C V EY++ G L H+
Sbjct: 47 VNDDEDIDWVQTEKHVFE----QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ 102
Query: 305 DHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF 364
L E+ + E++ A+ Y+H I +RD+K N+LLD +
Sbjct: 103 RQ------------RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEG 147
Query: 365 SAKVSDFGISRS--IPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELL 422
K++D+G+ + P D T + GT Y+ PE + + D ++ GV++ E++
Sbjct: 148 HIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 423 TGKKPI 428
G+ P
Sbjct: 205 AGRSPF 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSKEIDKTQIHQFINEVVILSQINHR 272
+++ R +G+G + V L ++ VK+ D I E + Q ++
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 273 HIVKLLGCCLETEVPVL-VYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+ L C +TE + V EY++ G L H+ L E+ +
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ------------RKLPEEHARFYSA 113
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQ 389
E++ A+ Y+H I +RD+K N+LLD + K++D+G+ + P D T +
Sbjct: 114 EISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFC 167
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT Y+ PE + + D ++ GV++ E++ G+ P
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 222
Query: 449 ENQLL 453
++++
Sbjct: 223 PDEVV 227
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 27/247 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTT 387
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 167
Query: 388 IQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISL 446
+ Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 LW----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTL 221
Query: 447 AKENQLL 453
++++
Sbjct: 222 GTPDEVV 228
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 167
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 221
Query: 449 ENQLL 453
++++
Sbjct: 222 PDEVV 226
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGS----IVAVK-RSKEIDKTQIHQFINEVVILSQIN 270
D Y+ LG G F V +L + +VA+K +KE + + NE+ +L +I
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IV L L+ + +S G L I + + R+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------------RDASRLI 122
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNIL---LDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+V AV Y+H + I HRD+K N+L LD+ +SDFG+S+ D + +T
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLST 177
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 222
Query: 449 ENQLL 453
++++
Sbjct: 223 PDEVV 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 224 LGQGGFGTVYKGMLP-DGSIVAVK---RSKEIDKTQIHQFINEVVILSQINHRHIVKLLG 279
LG G FG V G G VAVK R K + + E+ L H HI+KL
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
+V EY+S G L +I + L + R+ ++ V Y
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKN------------GRLDEKESRRLFQQILSGVDY 131
Query: 340 MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY 399
H + HRD+K N+LLD +AK++DFG+S + +D L + G+ Y PE
Sbjct: 132 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSC-GSPNYAAPEV 186
Query: 400 FQSSQFT-DKSDVYSFGVVLLELLTGKKP------------ICFARVEEERNLVACFISL 446
+ + D++S GV+L LL G P IC + L ISL
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISL 246
Query: 447 AKENQLLEILDARVAKEAREED 468
K ++ + K+ RE +
Sbjct: 247 LKHMLQVDPMKRATIKDIREHE 268
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 172
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 173 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 226
Query: 449 ENQLL 453
++++
Sbjct: 227 PDEVV 231
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E H H L+ + +
Sbjct: 62 NIVKLLDVIHTENKLYLVFE-----------HVHQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 167
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 221
Query: 449 ENQLL 453
++++
Sbjct: 222 PDEVV 226
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 167
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 221
Query: 449 ENQLL 453
++++
Sbjct: 222 PDEVV 226
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGS----IVAVK-RSKEIDKTQIHQFINEVVILSQIN 270
D Y+ LG G F V +L + +VA+K +KE + + NE+ +L +I
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IV L L+ + +S G L I + + R+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------------RDASRLI 122
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNIL---LDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+V AV Y+H + I HRD+K N+L LD+ +SDFG+S+ D + +T
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLST 177
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 112
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 168
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 224
Query: 448 KENQLL 453
++++
Sbjct: 225 TPDEVV 230
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 167
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 223
Query: 448 KENQLL 453
++++
Sbjct: 224 TPDEVV 229
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 112
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 168
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 224
Query: 448 KENQLL 453
++++
Sbjct: 225 TPDEVV 230
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 36/225 (16%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRS-KEIDKTQIH-----QFINEVVILSQ 268
++ Y + + LG G +G V +L + V+R+ K I KT + + + EV +L
Sbjct: 36 SEMYQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL 92
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
++H +I+KL + LV E G L I + + + N V
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI--------------IHRMKF-NEVD 137
Query: 329 VAC---EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKT 382
A +V V Y+H I HRD+K N+LL+ K K+ DFG+S N K
Sbjct: 138 AAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + ++ +K DV+S GV+L LL G P
Sbjct: 195 MKERL--GTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 221
Query: 448 KENQLL 453
++++
Sbjct: 222 TPDEVV 227
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 25/244 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQG 390
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV-- 164
Query: 391 TFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE 449
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGTP 222
Query: 450 NQLL 453
++++
Sbjct: 223 DEVV 226
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKTFMDASALTGIPLPLIKSYL 112
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 168
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 224
Query: 448 KENQLL 453
++++
Sbjct: 225 TPDEVV 230
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 113
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 169
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 225
Query: 448 KENQLL 453
++++
Sbjct: 226 TPDEVV 231
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 221
Query: 448 KENQLL 453
++++
Sbjct: 222 TPDEVV 227
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 166
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 222
Query: 448 KENQLL 453
++++
Sbjct: 223 TPDEVV 228
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 221
Query: 448 KENQLL 453
++++
Sbjct: 222 TPDEVV 227
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 167
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 223
Query: 448 KENQLL 453
++++
Sbjct: 224 TPDEVV 229
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 109
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 221
Query: 448 KENQLL 453
++++
Sbjct: 222 TPDEVV 227
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 167
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 223
Query: 448 KENQLL 453
++++
Sbjct: 224 TPDEVV 229
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYL 110
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 166
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 222
Query: 448 KENQLL 453
++++
Sbjct: 223 TPDEVV 228
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 25/244 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQG 390
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV-- 166
Query: 391 TFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE 449
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGTP 224
Query: 450 NQLL 453
++++
Sbjct: 225 DEVV 228
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 25/244 (10%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQG 390
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV-- 164
Query: 391 TFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE 449
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGTP 222
Query: 450 NQLL 453
++++
Sbjct: 223 DEVV 226
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ H L+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKDFMDASALTGIPLPLIKSYL 109
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 221
Query: 448 KENQLL 453
++++
Sbjct: 222 TPDEVV 227
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 48/236 (20%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVI--LSQINHRH 273
DN +G+G +G VYKG L D VAVK ++ FINE I + + H +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDN 68
Query: 274 IVKLLGCCLETEVP-----VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
I + + +LV EY +G+L ++ H W + R
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-------------DWVSSCR 115
Query: 329 VACEVAGAVAYMHSSASIP--------IFHRDIKSSNILLDDKFSAKVSDFGISRSI--- 377
+A V +AY+H+ +P I HRD+ S N+L+ + + +SDFG+S +
Sbjct: 116 LAHSVTRGLAYLHTE--LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
Query: 378 ----PNDKTHLTTTIQGTFGYLDPEYFQSS-------QFTDKSDVYSFGVVLLELL 422
P ++ + + GT Y+ PE + + + D+Y+ G++ E+
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 22/224 (9%)
Query: 211 LQRATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVI 265
+ R T N + + LG+G FG V K ++ +K+ + K ++ + E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
L H + L + V EY + G L H+ E+
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS-------------ED 109
Query: 326 RVRV-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
R R E+ A+ Y+HS ++ +RD+K N++LD K++DFG+ + D +
Sbjct: 110 RARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 167
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 168 KX-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 34/305 (11%)
Query: 211 LQRATDNYNQSRFLGQGGFGTV----YKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVIL 266
LQ ++Y+ + +G+G FG V +K ++ + + + I ++ F E I+
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
+ N +V+L + + +V EY+ G L + + ++ W
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-----------KWAKF 178
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT 386
EV A+ +HS I HRD+K N+LLD K++DFG +
Sbjct: 179 Y--TAEVVLALDAIHSMGLI---HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 387 TIQGTFGYLDPEYFQS----SQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
T GT Y+ PE +S + + D +S GV L E+L G P +LV
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY------ADSLVGT 287
Query: 443 FISLAK-ENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNS---KKRPTMKQVSMELE 498
+ + +N L DA ++K A+ + + +R R K+ P K +
Sbjct: 288 YSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWD 347
Query: 499 GLRRS 503
+R +
Sbjct: 348 NIRET 352
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +++ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 222
Query: 449 ENQLL 453
++++
Sbjct: 223 PDEVV 227
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E+ LS + D L+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASA------LTGIPLPLIKSYL 112
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 168
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 224
Query: 448 KENQLL 453
++++
Sbjct: 225 TPDEVV 230
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++S L+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLS-----------MDLKKFMDASALTGIPLPLIKSYL 112
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 168
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 224
Query: 448 KENQLL 453
++++
Sbjct: 225 TPDEVV 230
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E+ LS + D L+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASA------LTGIPLPLIKSYL 111
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 167
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 223
Query: 448 KENQLL 453
++++
Sbjct: 224 TPDEVV 229
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++S L+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLS-----------MDLKKFMDASALTGIPLPLIKSYL 110
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 166
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 222
Query: 448 KENQLL 453
++++
Sbjct: 223 TPDEVV 228
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 21/212 (9%)
Query: 222 RFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKL 277
+ LG+G FG V K ++ +K+ + K ++ + E +L H + L
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 278 LGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV-ACEVAGA 336
+ V EY + G L H+ E+R R E+ A
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFS-------------EDRARFYGAEIVSA 122
Query: 337 VAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLD 396
+ Y+HS ++ +RD+K N++LD K++DFG+ + D + GT YL
Sbjct: 123 LDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLA 179
Query: 397 PEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
PE + + + D + GVV+ E++ G+ P
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 213 RATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILS 267
R T N + + LG+G FG V K ++ +K+ + K ++ + E +L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
H + L + V EY + G L H+ E+R
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS-------------EDRA 110
Query: 328 RV-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT 386
R E+ A+ Y+HS ++ +RD+K N++LD K++DFG+ + D +
Sbjct: 111 RFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX 168
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 169 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 261 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSS 320
NE+ +L +I H +IV L L+ + +S G L I +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE--------- 115
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNIL---LDDKFSAKVSDFGISRSI 377
+ R+ +V AV Y+H + I HRD+K N+L LD+ +SDFG+S+
Sbjct: 116 ---RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM- 168
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
D + +T GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 169 -EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 208 ADELQRATDNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN----- 261
A +++ Y + FLG+G F TVYK + IVA+K+ K +++ IN
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
E+ +L +++H +I+ LL LV++++ + L I D+ +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI--PN 379
+ + + Y+H I HRD+K +N+LLD+ K++DFG+++S PN
Sbjct: 121 TLQ-----------GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166
Query: 380 DKTHLTTTIQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELL 422
+ + + T Y PE F + + D+++ G +L ELL
Sbjct: 167 -RAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 75
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 134 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 184 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+ + + +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 222
Query: 449 ENQLL 453
++++
Sbjct: 223 PDEVV 227
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 27/245 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQINHR 272
+N+ + +G+G +G VYK G +VA+ + + +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+IVKLL LV+E++ H L+ + +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IP-NDKTHLTTTIQ 389
+ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P TH T+
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 167
Query: 390 GTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 168 ----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLGT 221
Query: 449 ENQLL 453
++++
Sbjct: 222 PDEVV 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 79
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 138 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 187
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 188 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 87
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 146 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 196 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTV----YKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVI 265
+L+ ++Y + +G+G FG V +K ++ + + + I ++ F E I
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
++ N +V+L + +V EY+ G L + + ++ E
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP--------------EK 168
Query: 326 RVRV-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
R EV A+ +HS I HRD+K N+LLD K++DFG + +
Sbjct: 169 WARFYTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225
Query: 385 TTTIQGTFGYLDPEYFQS----SQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLV 440
T GT Y+ PE +S + + D +S GV L E+L G P +LV
Sbjct: 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY------ADSLV 279
Query: 441 ACFISLAK-ENQLLEILDARVAKEAR 465
+ + +N L D ++KEA+
Sbjct: 280 GTYSKIMNHKNSLTFPDDNDISKEAK 305
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTV----YKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVI 265
+L+ ++Y + +G+G FG V +K ++ + + + I ++ F E I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
++ N +V+L + +V EY+ G L + + ++ E
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP--------------EK 173
Query: 326 RVRV-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
R EV A+ +HS I HRD+K N+LLD K++DFG + +
Sbjct: 174 WARFYTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 385 TTTIQGTFGYLDPEYFQS----SQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLV 440
T GT Y+ PE +S + + D +S GV L E+L G P +LV
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY------ADSLV 284
Query: 441 ACFISLAK-ENQLLEILDARVAKEAR 465
+ + +N L D ++KEA+
Sbjct: 285 GTYSKIMNHKNSLTFPDDNDISKEAK 310
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG++R I D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 381 KTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
++ + ++ PE +T +SDV+SFGV+L E+ + G P +++EE
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-- 304
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
F KE + D + M + + C +RPT ++ L
Sbjct: 305 ----FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELVEHLG 351
Query: 499 GL 500
L
Sbjct: 352 NL 353
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 76
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 135 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 184
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 185 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTV----YKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVI 265
+L+ ++Y + +G+G FG V +K ++ + + + I ++ F E I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
++ N +V+L + +V EY+ G L + + ++ E
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP--------------EK 173
Query: 326 RVRV-ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
R EV A+ +HS I HRD+K N+LLD K++DFG + +
Sbjct: 174 WARFYTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 385 TTTIQGTFGYLDPEYFQS----SQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLV 440
T GT Y+ PE +S + + D +S GV L E+L G P +LV
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY------ADSLV 284
Query: 441 ACFISLAK-ENQLLEILDARVAKEAR 465
+ + +N L D ++KEA+
Sbjct: 285 GTYSKIMNHKNSLTFPDDNDISKEAK 310
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG++R I D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 381 KTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
++ + ++ PE +T +SDV+SFGV+L E+ + G P +++EE
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-- 311
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
F KE + D + M + + C +RPT ++ L
Sbjct: 312 ----FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELVEHLG 358
Query: 499 GL 500
L
Sbjct: 359 NL 360
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG++R I D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 381 KTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
++ + ++ PE +T +SDV+SFGV+L E+ + G P +++EE
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-- 309
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
F KE + D + M + + C +RPT ++ L
Sbjct: 310 ----FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELVEHLG 356
Query: 499 GL 500
L
Sbjct: 357 NL 358
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
L+ E+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG++R I D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 381 KTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
++ + ++ PE +T +SDV+SFGV+L E+ + G P +++EE
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-- 302
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
F KE + D + M + + C +RPT ++ L
Sbjct: 303 ----FCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELVEHLG 349
Query: 499 GL 500
L
Sbjct: 350 NL 351
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 75
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 134 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 184 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 94
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 153 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 202
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 203 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 35/229 (15%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVIL 266
Q +D Y + + LG G +G V K + +I +K+S + ++EV +L
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
Q++H +I+KL + LV E G L I S +
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI------------ILRQKFSEVDA 123
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTH 383
+ +V Y+H I HRD+K N+LL+ K K+ DFG+S H
Sbjct: 124 AVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS-------AH 173
Query: 384 LTTTIQ-----GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ GT Y+ PE + ++ +K DV+S GV+L LL G P
Sbjct: 174 FEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 83
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 142 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 191
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 192 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 75
Query: 275 VKLL------GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L G + LV +Y+ + + H L R
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 134 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 184 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + + H L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 134 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 184 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 87
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 146 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 196 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 109
Query: 275 VKL---LGCCLETEVPV---LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L E + V LV +Y+ + + H L R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 168 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 217
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 218 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 224 LGQGGFG-TVYKGMLPDGSIVAVK-RSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCC 281
LG G F V G + AVK K+ K + NE+ +L +I H +IV L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
LV + +S G L D S+L +R +V AV Y+H
Sbjct: 90 ESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTL-----IR---QVLDAVYYLH 137
Query: 342 SSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE 398
+ I HRD+K N+L D++ +SDFG+S+ K + +T GT GY+ PE
Sbjct: 138 R---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPE 192
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
++ D +S GV+ LL G P
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 75
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 134 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 184 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 22/219 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINH 271
TD Y +G+G F V + + L G A K +K++ + E I + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+IV+L E LV++ ++ G L I S +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDI------------VAREYYSEADASHCIQ 110
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTTTI 388
++ AV + H + + HRD+K N+LL K + K++DFG++ + D+
Sbjct: 111 QILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGF 166
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GYL PE + + D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 88
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 147 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 196
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 197 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 30/251 (11%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQIHQF-----INEVVILS 267
AT Y +G G +GTVYK P G VA+K + + + EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 268 QIN---HRHIVKLLGCC----LETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
++ H ++V+L+ C + E+ V LV+E++ D L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD--------QDLRTYLDKAPPPGLP 118
Query: 320 SLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPN 379
+ + ++ +R + + ++H++ I HRD+K NIL+ + K++DFG++R I +
Sbjct: 119 AETIKDLMR---QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYS 171
Query: 380 DKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNL 439
+ LT + T Y PE S + D++S G + E+ K C ++
Sbjct: 172 YQMALTPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK 230
Query: 440 VACFISLAKEN 450
+ I L E+
Sbjct: 231 IFDLIGLPPED 241
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 109
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 168 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 217
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 218 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 223 FLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
FLG+GGF ++ D V V +S + Q + E+ I + H+H+V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G + + +V E +L +H + + ++ + C+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-----EARYYLRQIVLGCQ------ 135
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE 398
Y+H + I HRD+K N+ L++ K+ DFG++ + D T+ GT Y+ PE
Sbjct: 136 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPE 191
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + DV+S G ++ LL GK P
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 25/246 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKEIDKTQ--IHQFINEVVILSQIN 270
+ +N+ + +G+G +G VYK G +VA+K+ + +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +IVKLL LV+E++ L+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQD-----------LKKFMDASALTGIPLPLIKSYL 112
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTI 388
++ +A+ HS + HRD+K N+L++ + + K++DFG++R+ +P +T+ +
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 168
Query: 389 QGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
T Y PE ++ + D++S G + E++T + F E L F +L
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSEIDQLFRIFRTLG 224
Query: 448 KENQLL 453
++++
Sbjct: 225 TPDEVV 230
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 80
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 139 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 188
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 189 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 223 FLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
FLG+GGF ++ D V V +S + Q + E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G + + +V E +L +H + + ++ + C+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-----EARYYLRQIVLGCQ------ 131
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE 398
Y+H + I HRD+K N+ L++ K+ DFG++ + D T+ GT Y+ PE
Sbjct: 132 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPE 187
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + DV+S G ++ LL GK P
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 111
Query: 275 VKL---LGCCLETEVPV---LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L E + V LV +Y+ + + H L R
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 170 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 219
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 220 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 103
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 162 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 211
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 212 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 223 FLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
FLG+GGF ++ D V V +S + Q + E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G + + +V E +L +H + + ++ + C+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-----EARYYLRQIVLGCQ------ 131
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE 398
Y+H + I HRD+K N+ L++ K+ DFG++ + D T+ GT Y+ PE
Sbjct: 132 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPE 187
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + DV+S G ++ LL GK P
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 39/246 (15%)
Query: 256 IHQFINEVVILSQINHRHIVKLLGCCLETEVP--VLVYEYISSGTLSHHIHDHXXXXXXX 313
I Q E+ IL +++H ++VKL+ + +V+E ++ G +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME------------ 127
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGI 373
L LS + ++ + Y+H I HRDIK SN+L+ + K++DFG+
Sbjct: 128 -VPTLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGV 183
Query: 374 SRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQ--FTDKS-DVYSFGVVLLELLTGKKPICF 430
S L+ T+ GT ++ PE ++ F+ K+ DV++ GV L + G+ P
Sbjct: 184 SNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
Query: 431 ARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGA-MAELAMRCLRLNSKKRPT 489
R + C S K +Q LE D + DI + +L R L N + R
Sbjct: 243 ER-------IMCLHSKIK-SQALEFPD--------QPDIAEDLKDLITRMLDKNPESRIV 286
Query: 490 MKQVSM 495
+ ++ +
Sbjct: 287 VPEIKL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 27/248 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVK--RSKEIDKTQIHQFINEVVILSQIN 270
AT Y +G G +GTVYK P G VA+K R ++ + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 271 ---HRHIVKLLGCC----LETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
H ++V+L+ C + E+ V LV+E++ D L + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD--------QDLRTYLDKAPPPGLPAET 113
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
++ +R + + ++H++ I HRD+K NIL+ + K++DFG++R I + +
Sbjct: 114 IKDLMR---QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQM 166
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
L + T Y PE S + D++S G + E+ K C ++ +
Sbjct: 167 ALAPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
Query: 443 FISLAKEN 450
I L E+
Sbjct: 226 LIGLPPED 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 113
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 172 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 221
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 222 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 94/230 (40%), Gaps = 25/230 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHR 272
+ ++ LG+G +G V P G IVA+K+ + DK + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+I+ + YI + +H LS ++ +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH---------RVISTQMLSDDHIQYFIYQ 120
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI---------PNDKTH 383
AV +H S I HRD+K SN+L++ KV DFG++R I P +
Sbjct: 121 TLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 384 LTTTIQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGKKPICFAR 432
T T Y PE S++++ DV+S G +L EL ++PI R
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR 226
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 27/248 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVK--RSKEIDKTQIHQFINEVVILSQIN 270
AT Y +G G +GTVYK P G VA+K R ++ + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 271 ---HRHIVKLLGCC----LETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
H ++V+L+ C + E+ V LV+E++ D L + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD--------QDLRTYLDKAPPPGLPAET 113
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
++ +R + + ++H++ I HRD+K NIL+ + K++DFG++R
Sbjct: 114 IKDLMR---QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
+ T Y PE S + D++S G + E+ K C ++ +
Sbjct: 168 LFPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
Query: 443 FISLAKEN 450
I L E+
Sbjct: 226 LIGLPPED 233
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 134 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 184 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 25/220 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKR----SKEIDKTQIHQFINEVVILSQINH 271
D Y+ LG G FG V++ + V V + +DK + NE+ I++Q++H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK---NEISIMNQLHH 107
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
++ L + VL+ E++S G L I +S N +R AC
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRI--------AAEDYKMSEAEVINYMRQAC 159
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDK--FSAKVSDFGISRSIPNDKTHLTTTIQ 389
E + +MH + I H DIK NI+ + K S K+ DFG++ + D+ TT
Sbjct: 160 E---GLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
F PE +D+++ GV+ LL+G P
Sbjct: 214 AEFA--APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q +F N E+ I+ +++H +I
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 154
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 213 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 262
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 263 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 94/230 (40%), Gaps = 25/230 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHR 272
+ ++ LG+G +G V P G IVA+K+ + DK + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+I+ + YI + +H LS ++ +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH---------RVISTQMLSDDHIQYFIYQ 120
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI---------PNDKTH 383
AV +H S I HRD+K SN+L++ KV DFG++R I P +
Sbjct: 121 TLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 384 LTTTIQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGKKPICFAR 432
T T Y PE S++++ DV+S G +L EL ++PI R
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR 226
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 215 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D Y + + LG G +G V K + +I +K+S + ++EV +L Q++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H +I+KL + LV E G L I S + +
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI------------ILRQKFSEVDAAVIM 110
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIP---NDKTHL 384
+V Y+H I HRD+K N+LL+ K K+ DFG+S K L
Sbjct: 111 KQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 167
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT Y+ PE + ++ +K DV+S GV+L LL G P
Sbjct: 168 -----GTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 215 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQIN 270
+D + LG+G VY KG ++ +K++ +DK + E+ +L +++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVR---TEIGVLLRLS 106
Query: 271 HRHIVKLLGCCLETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H +I+KL ET + LV E ++ G L I + S +
Sbjct: 107 HPNIIKL-KEIFETPTEISLVLELVTGGELFDRIVEK------------GYYSERDAADA 153
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTT 386
++ AVAY+H + I HRD+K N+L K++DFG+S+ + + L
Sbjct: 154 VKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMK 208
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
T+ GT GY PE + + + D++S G++ LL G +P
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 217 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHI 274
+Y ++ +G G FG VY+ L D G +VA+K+ Q F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 275 VKLLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
V+L + EV + LV +Y+ + + H L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETV--YRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTTT 387
++AY+HS I HRDIK N+LLD D K+ DFG ++ + + +++
Sbjct: 134 -------SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 388 IQGTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T DV+S G VL ELL G+
Sbjct: 184 CSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 140
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 141 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 190 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 243
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 244 --EHDEEIIGGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 283
Query: 492 QV 493
++
Sbjct: 284 EI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 139
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 140 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 189 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 242
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 243 --EHDEEIIGGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 282
Query: 492 QV 493
++
Sbjct: 283 EI 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 139
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 140 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 189 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 242
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 243 --EHDEEIIGGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 282
Query: 492 QV 493
++
Sbjct: 283 EI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 140
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 141 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 190 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 243
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 244 --EHDEEIIGGQVFFRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFE 283
Query: 492 QV 493
++
Sbjct: 284 EI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 139
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 140 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 189 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 242
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 243 --EHDEEIIGGQVFFRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFE 282
Query: 492 QV 493
++
Sbjct: 283 EI 284
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 27/248 (10%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVK--RSKEIDKTQIHQFINEVVILSQIN 270
AT Y +G G +GTVYK P G VA+K R ++ + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 271 ---HRHIVKLLGCC----LETEVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
H ++V+L+ C + E+ V LV+E++ D L + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD--------QDLRTYLDKAPPPGLPAET 113
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKT 382
++ +R + + ++H++ I HRD+K NIL+ + K++DFG++R I + +
Sbjct: 114 IKDLMR---QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQM 166
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
L + T Y PE S + D++S G + E+ K C ++ +
Sbjct: 167 ALDPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
Query: 443 FISLAKEN 450
I L E+
Sbjct: 226 LIGLPPED 233
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 140
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 141 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 190 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 243
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 244 --EHDEEIIGGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 283
Query: 492 QV 493
++
Sbjct: 284 EI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 140
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 141 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 190 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 243
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 244 --EHDEEIIGGQVFFRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFE 283
Query: 492 QV 493
++
Sbjct: 284 EI 285
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 28/223 (12%)
Query: 216 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVVILSQ 268
D Y+ LG G F V K G+ + +R+K + + I EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEEEATE 118
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPNDKTHL 384
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNE 173
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 174 FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGM--LPDGSIVA-VKRSKEIDKTQIHQFINEVVILSQI 269
R TD+Y LG+G F V + + P A + +K++ + E I +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H +IV+L E LV++ ++ G L I S +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI------------VAREYYSEADASHC 135
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDK---FSAKVSDFGISRSIPNDKTHLTT 386
++ +V ++H I HRD+K N+LL K + K++DFG++ + ++
Sbjct: 136 IHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWF 191
Query: 387 TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GYL PE + + D+++ GV+L LL G P
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 348 IFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTD 407
+ HRD+K SNILLD++ K+ DFGIS + +DK + G Y+ PE T
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTK 203
Query: 408 -----KSDVYSFGVVLLELLTGKKP 427
++DV+S G+ L+EL TG+ P
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFP 228
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 38 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 154
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 155 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 203
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 204 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 257
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 258 --EHDEEIIRGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 297
Query: 492 QV 493
++
Sbjct: 298 EI 299
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + + D S W
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEP---VQDLFDFITERGALQEELARSFFW---- 121
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 122 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 171
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 226
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 227 FRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFEEI 256
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 127
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 128 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 177 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 230
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 231 --EHDEEIIRGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 270
Query: 492 QV 493
++
Sbjct: 271 EI 272
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 38 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 154
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 155 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 203
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 204 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 257
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 258 --EHDEEIIRGQVFFRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFE 297
Query: 492 QV 493
++
Sbjct: 298 EI 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 10 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 126
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 127 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 175
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 176 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 229
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 230 --EHDEEIIRGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 269
Query: 492 QV 493
++
Sbjct: 270 EI 271
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 30 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 89
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 90 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 146
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 147 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 195
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 196 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 249
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 250 --EHDEEIIRGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 289
Query: 492 QV 493
++
Sbjct: 290 EI 291
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 127
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 128 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 177 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 230
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 231 --EHDEEIIRGQVFFRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFE 270
Query: 492 QV 493
++
Sbjct: 271 EI 272
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 139
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 140 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 189 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 242
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 243 --EHDEEIIRGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFE 282
Query: 492 QV 493
++
Sbjct: 283 EI 284
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 223 FLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
FLG+GGF ++ D V V +S + Q + E+ I + H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G + + +V E +L +H + + ++ + C+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-----EARYYLRQIVLGCQ------ 129
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE 398
Y+H + I HRD+K N+ L++ K+ DFG++ + D + GT Y+ PE
Sbjct: 130 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 185
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + DV+S G ++ LL GK P
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 138/302 (45%), Gaps = 59/302 (19%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPD----GSI----VAVKRSKEIDKTQIHQFINEVVILSQI 269
+N+S LGQG F ++KG+ + G + V +K + + F ++S++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
+H+H+V G C+ + +LV E++ G+L ++ + ++ W ++ V
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCI---------NILW--KLEV 118
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILL---DDKFSA-----KVSDFGISRSI-PND 380
A ++A A+ ++ + I H ++ + NILL +D+ + K+SD GIS ++ P D
Sbjct: 119 AKQLAAAMHFLEENTLI---HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
+Q ++ PE ++ + + +D +SFG L E+ + G KP+ + ++ +R
Sbjct: 176 ------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL--SALDSQRK 227
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
L Q E A +A E +A L C+ RP+ + + +L
Sbjct: 228 L-----------QFYEDRHQLPAPKAAE-----LANLINNCMDYEPDHRPSFRAIIRDLN 271
Query: 499 GL 500
L
Sbjct: 272 SL 273
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 43 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 102
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 103 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 159
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 160 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 208
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 209 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 262
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 263 --EHDEEIIRGQVFFRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFE 302
Query: 492 QV 493
++
Sbjct: 303 EI 304
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 25/230 (10%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH-QFINEVVILSQINHR 272
+ ++ LG+G +G V P G IVA+K+ + DK + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 273 HIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+I+ + YI + +H LS ++ +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH---------RVISTQMLSDDHIQYFIYQ 120
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI---------PNDKTH 383
AV +H S I HRD+K SN+L++ KV DFG++R I P +
Sbjct: 121 TLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 384 LTTTIQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGKKPICFAR 432
T Y PE S++++ DV+S G +L EL ++PI R
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR 226
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 117
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 118 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 167
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVF 222
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 223 FRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFEEI 252
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 127
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 128 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 177 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 230
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 231 --EHDEEIIRGQVFFRQ----------RVSXECQ--------HLIRWCLALRPXDRPTFE 270
Query: 492 QV 493
++
Sbjct: 271 EI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 51/302 (16%)
Query: 203 AKVFTADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN 261
K+ E + Y LG GGFG+VY G+ + D VA+K ++ + + N
Sbjct: 10 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 262 ------EVVILSQINH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXX 313
EVV+L +++ +++LL + VL+ E + D
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGAL 126
Query: 314 XXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFG 372
S W +V AV + H+ + HRDIK NIL+D ++ K+ DFG
Sbjct: 127 QEELARSFFW--------QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 175
Query: 373 ISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFA 431
S ++ D + T GT Y PE+ + ++ +S V+S G++L +++ G P
Sbjct: 176 -SGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 229
Query: 432 RVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
E + ++ + + RV+ E + L CL L RPT +
Sbjct: 230 --EHDEEIIRGQVFFRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFE 269
Query: 492 QV 493
++
Sbjct: 270 EI 271
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 45/299 (15%)
Query: 223 FLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
+G+G FG VY G + + + ++ Q+ F EV+ Q H ++V +G C+
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 283 ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR-VACEVAGAVAYMH 341
++ TL + D N+ R +A E+ + Y+H
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDV------------NKTRQIAQEIVKGMGYLH 147
Query: 342 SSASIPIFHRDIKSSNILLDDKFSAKVSDFG---ISRSIPNDKTHLTTTIQ-GTFGYLDP 397
+ I H+D+KS N+ D+ ++DFG IS + + IQ G +L P
Sbjct: 148 AKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 398 EYFQSSQ---------FTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAK 448
E + F+ SDV++ G + EL + P + + ++ + K
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF---KTQPAEAIIWQMGTGMK 260
Query: 449 ENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCL 507
N + + KE ++++ + C ++RPT ++ LE L + R L
Sbjct: 261 PN----LSQIGMGKE--------ISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL 307
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 223 FLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
FLG+GGF ++ D V V +S + Q + E+ I + H+H+V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G + + +V E +L +H + + ++ + C+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-----EARYYLRQIVLGCQ------ 153
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE 398
Y+H + I HRD+K N+ L++ K+ DFG++ + D + GT Y+ PE
Sbjct: 154 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 209
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + DV+S G ++ LL GK P
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 225 GQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL-----G 279
+G FG V+K L + VAVK DK Q Q E+ + H ++++ + G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDK-QSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 280 CCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAY 339
LE E+ L+ + G+L+ ++ + ++W VA ++ ++Y
Sbjct: 82 SNLEVEL-WLITAFHDKGSLTDYLKGNI-------------ITWNELCHVAETMSRGLSY 127
Query: 340 MHSSASI--------PIFHRDIKSSNILLDDKFSAKVSDFGIS-RSIPNDKTHLTTTIQG 390
+H I HRD KS N+LL +A ++DFG++ R P T G
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVG 187
Query: 391 TFGYLDPEY------FQSSQFTDKSDVYSFGVVLLELLT 423
T Y+ PE FQ F + D+Y+ G+VL EL++
Sbjct: 188 TRRYMAPEVLEGAINFQRDAFL-RIDMYAMGLVLWELVS 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 223 FLGQGGFGTVYKGMLPDGSIV----AVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
FLG+GGF ++ D V V +S + Q + E+ I + H+H+V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
G + + +V E +L +H + + ++ + C+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-----EARYYLRQIVLGCQ------ 155
Query: 339 YMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE 398
Y+H + I HRD+K N+ L++ K+ DFG++ + D + GT Y+ PE
Sbjct: 156 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPE 211
Query: 399 YFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + DV+S G ++ LL GK P
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 28/223 (12%)
Query: 216 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVVILSQ 268
D Y+ LG G F V K G+ + +R+K + + I EV IL +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEEEATE 118
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPNDKTHL 384
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNE 173
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 59/302 (19%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPD----GSI----VAVKRSKEIDKTQIHQFINEVVILSQI 269
+N+S LGQG F ++KG+ + G + V +K + + F ++S++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
+H+H+V G C + +LV E++ G+L ++ + ++ W ++ V
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCI---------NILW--KLEV 118
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILL---DDKFSA-----KVSDFGISRSI-PND 380
A ++A A+ ++ + I H ++ + NILL +D+ + K+SD GIS ++ P D
Sbjct: 119 AKQLAWAMHFLEENTLI---HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
+Q ++ PE ++ + + +D +SFG L E+ + G KP+ + ++ +R
Sbjct: 176 ------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL--SALDSQRK 227
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
L Q E A +A E +A L C+ RP+ + + +L
Sbjct: 228 L-----------QFYEDRHQLPAPKAAE-----LANLINNCMDYEPDHRPSFRAIIRDLN 271
Query: 499 GL 500
L
Sbjct: 272 SL 273
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTI 388
++ AV++MH + + HRD+K N+L +D K+ DFG +R P D L T
Sbjct: 114 KLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
T Y PE + + + D++S GV+L +L+G+ P
Sbjct: 171 -FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 57/295 (19%)
Query: 217 NYNQSRFLGQGGFGTVYKG-MLPDGSIVAVK---RSKEIDKTQIHQFIN---EVVILSQI 269
Y LG+GGFGTV+ G L D VA+K R++ + + + + EV +L ++
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 270 N----HRHIVKLLGCCLETEVPVLVYEY-ISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
H +++LL E +LV E + + L +I +
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG----- 146
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTH 383
+V A+ + HS + HRDIK NIL+D + AK+ DFG S ++ +D+ +
Sbjct: 147 -------QVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPY 195
Query: 384 LTTTIQGTFGYLDPEYFQSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNLVAC 442
T GT Y PE+ Q+ + V+S G++L +++ G P ER+
Sbjct: 196 --TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF-------ERD---- 242
Query: 443 FISLAKENQLLEILDARVAKEAR-EEDIGAMAELAMRCLRLNSKKRPTMKQVSME 496
EIL+A + A D A L RCL RP+++++ ++
Sbjct: 243 ----------QEILEAELHFPAHVSPDCCA---LIRRCLAPKPSSRPSLEEILLD 284
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 137
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 138 LRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 120
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 121 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 170
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 225
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 226 FRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFEEI 255
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 117
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 118 ----QVLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 167
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 222
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 223 FRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFEEI 252
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 122
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 123 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 172
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 227
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 228 FRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFEEI 257
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 117
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 118 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 167
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 222
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 223 FRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFEEI 252
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 122
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 123 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 172
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 227
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 228 FRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFEEI 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 121
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 122 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 171
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 226
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 227 FRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFEEI 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 122
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 123 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 172
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 227
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 228 FRQ----------RVSSECQ--------HLIRWCLALRPSDRPTFEEI 257
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y Q +++G+G +G V + VA+K+ + +T + + E+ IL + H +++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + + YI + ++ LS ++ ++
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS---------QQLSNDHICYFLYQILR 155
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR--SIPNDKTHLTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+L++ K+ DFG++R +D T T T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 137
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 138 LRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 113
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 114 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 168
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 217 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFIN------EVVILSQI 269
Y LG GGFG+VY G+ + D VA+K ++ + + N EVV+L ++
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 270 NH--RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ +++LL + VL+ E + D S W
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFW---- 144
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDKTHLTT 386
+V AV + H+ + HRDIK NIL+D ++ K+ DFG S ++ D + T
Sbjct: 145 ----QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--T 194
Query: 387 TIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPICFARVEEERNLVACFIS 445
GT Y PE+ + ++ +S V+S G++L +++ G P E + ++ +
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVF 249
Query: 446 LAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
+ RV+ E + L CL L RPT +++
Sbjct: 250 FRQ----------RVSXECQ--------HLIRWCLALRPSDRPTFEEI 279
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 113
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 114 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 168
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 35/258 (13%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 131
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 132 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGKKPICFARV-------------EEER 437
Y PE +S+ +T D++S G +L E+L+ +PI + E+
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPEQ 247
Query: 438 NLVACFISLAKENQLLEI 455
+ C I+L N LL +
Sbjct: 248 EDLNCIINLKARNYLLSL 265
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 135
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 350 HRDIKSSNILLDDKFSAKVSDFGISRSIPNDK-THLTTTIQGTFGYLDPEYFQSSQFTDK 408
HRD+K NIL+ A + DFGI+ + ++K T L T+ GT Y PE F S T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 409 SDVYSFGVVLLELLTGKKP 427
+D+Y+ VL E LTG P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKCQHLSNDHICYFLYQI 137
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 138 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D+Y+ LG G FG V++ G+ A K E DK + + E+ +S + H
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLRH 213
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+V L + V++YE++S G L + D + +S + V
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-----------NKMSEDEAVEYMR 262
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSI-PNDKTHLTTTI 388
+V + +MH + + H D+K NI+ K S K+ DFG++ + P +TT
Sbjct: 263 QVCKGLCHMHENNYV---HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT-- 317
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEE-RNLVAC 442
GT + PE + +D++S GV+ LL+G P +E RN+ +C
Sbjct: 318 -GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 371
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 216 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVK---RSKEIDKTQIHQFINEVVILSQINH 271
D+Y+ LG G FG V++ G+ A K E DK + + E+ +S + H
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLRH 107
Query: 272 RHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
+V L + V++YE++S G L + D + +S + V
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-----------NKMSEDEAVEYMR 156
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSI-PNDKTHLTTTI 388
+V + +MH + + H D+K NI+ K S K+ DFG++ + P +TT
Sbjct: 157 QVCKGLCHMHENNYV---HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT-- 211
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEE-RNLVAC 442
GT + PE + +D++S GV+ LL+G P +E RN+ +C
Sbjct: 212 -GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 265
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGS----IVAVKRSK-----EIDKTQIHQFINEVVI 265
+ Y+ LG G FG V+ + + + + +K+ K I+ ++ + E+ I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSG-TLSHHIHDHXXXXXXXXXXXLSSLSWE 324
LS++ H +I+K+L LV E SG L I H L
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL--- 139
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
AV Y+ I HRDIK NI++ + F+ K+ DFG + + ++ L
Sbjct: 140 ---------VSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKL 185
Query: 385 TTTIQGTFGYLDPEYFQSSQFTDKS-DVYSFGVVLLELLTGKKPIC 429
T GT Y PE + + +++S GV L L+ + P C
Sbjct: 186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 138
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 139 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 139
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 140 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 130
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 131 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 137
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 138 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 131
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 132 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 135
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 100/233 (42%), Gaps = 32/233 (13%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGS--IVAVK---RSKEIDKTQIHQFINEVVILSQI 269
+D Y + +G G FG V + M S +VAVK R ++ID+ + IN +
Sbjct: 17 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSL 71
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H +IV+ L +V EY S G L I + L
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL-------- 123
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSIPNDKTHLTTT 387
++G V+Y H+ + + HRD+K N LLD + K+ DFG S+S +T
Sbjct: 124 ---ISG-VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV 176
Query: 388 IQGTFGYLDPEYFQSSQFTDK-SDVYSFGVVLLELLTGKKPICFARVEEERNL 439
GT Y+ PE ++ K +DV+S GV L +L G P F EE +N
Sbjct: 177 --GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 135
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 101/250 (40%), Gaps = 37/250 (14%)
Query: 201 ERAKVFTAD---ELQRATDNYNQSRFLGQGGFGTVYKGMLPDG---SIVAVK---RSKEI 251
+RA V T + +D Y+ + +G G FG ++ D +VAVK R I
Sbjct: 2 DRAPVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVAR--LMRDKLTKELVAVKYIERGAAI 59
Query: 252 DKTQIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXX 311
D+ + IN + H +IV+ L ++ EY S G L I +
Sbjct: 60 DENVQREIINH----RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSE 115
Query: 312 XXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVS 369
L V+Y HS + I HRD+K N LLD + K+
Sbjct: 116 DEARFFFQQL------------LSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKIC 160
Query: 370 DFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDK-SDVYSFGVVLLELLTGKKPI 428
DFG S+S +T GT Y+ PE ++ K +DV+S GV L +L G P
Sbjct: 161 DFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP- 217
Query: 429 CFARVEEERN 438
F EE R+
Sbjct: 218 -FEDPEEPRD 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTT 386
+ + ++A AV ++HS + HRD+K SNI KV DFG+ ++ D+ T
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 387 TIQ-----------GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELL 422
GT Y+ PE + ++ K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 224 LGQGGFGTVYKGMLP-DGSIVAVKR----SKEIDKTQIHQFINEVVILSQINHRHIVKLL 278
+G+GGFG V++ D A+KR ++E+ + ++ + EV L+++ H IV+
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKV---MREVKALAKLEHPGIVRYF 70
Query: 279 GCCLET 284
LET
Sbjct: 71 NAWLET 76
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + Y+ + H LS ++ ++
Sbjct: 105 GINDIIRAPTIEQMKDVYLVT---------HLMGADLYKLLKTQHLSNDHICYFLYQILR 155
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
+ D Y+ LG G F V K G+ + +R+K + + I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL +I H +++ L +L+ E ++ G L + + SL+ E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK------------ESLTEE 114
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDD----KFSAKVSDFGISRSIPND 380
++ V Y+HS + I H D+K NI+L D K K+ DFG++ I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 135
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
Query: 205 VFTADELQRATDNYNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QF 259
V AD Y Q + +G G G V + +L G VAVK+ + Q H +
Sbjct: 11 VQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRA 68
Query: 260 INEVVILSQINHRHIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX 314
E+V+L +NH++I+ LL LE V + + L IH
Sbjct: 69 YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH---------- 118
Query: 315 XXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGIS 374
L E + ++ + ++HS+ I HRD+K SNI++ + K+ DFG++
Sbjct: 119 ----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 171
Query: 375 RSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
R+ + + T T Y PE + + D++S G ++ EL+ G
Sbjct: 172 RTASTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 137
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 143
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 144 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 135
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL + H +I+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 155
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 36/278 (12%)
Query: 224 LGQGGFGTVYK-GMLPDGSIVAVKRSKEIDKTQIHQ--FINEVVILSQINHRHIVKLLGC 280
LG+G +G V K +P G I+AVKR + +Q + ++ + + ++ V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 281 CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYM 340
E V + + +L L ++A + A+ ++
Sbjct: 119 LFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG--------KIAVSIVKALEHL 169
Query: 341 HSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY- 399
HS S+ HRD+K SN+L++ K+ DFGIS + + + T G Y+ PE
Sbjct: 170 HSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERI 225
Query: 400 ---FQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE-NQLLEI 455
++ KSD++S G+ ++EL + P + S QL ++
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAILRFP---------------YDSWGTPFQQLKQV 270
Query: 456 LDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
++ + ++ + +CL+ NSK+RPT ++
Sbjct: 271 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 224 LGQGGFGTVYK-GMLPDGSIVAVKRSKEIDKTQIHQ--FINEVVILSQINHRHIVKLLGC 280
LG+G +G V K +P G I+AVKR + +Q + ++ + + ++ V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 281 CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYM 340
E V + + +L L ++A + A+ ++
Sbjct: 75 LFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG--------KIAVSIVKALEHL 125
Query: 341 HSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEY- 399
HS S+ HRD+K SN+L++ K+ DFGIS + +D G Y+ PE
Sbjct: 126 HSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--GCKPYMAPERI 181
Query: 400 ---FQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKE-NQLLEI 455
++ KSD++S G+ ++EL + P + S QL ++
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFP---------------YDSWGTPFQQLKQV 226
Query: 456 LDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
++ + ++ + +CL+ NSK+RPT ++
Sbjct: 227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPD---GSIVAVK---RSKEIDKTQIHQFINEVVILSQ 268
+D Y + +G G FG ++ D +VAVK R ++ID+ + IN
Sbjct: 18 SDRYELVKDIGAGNFGVAR--LMRDKQANELVAVKYIERGEKIDENVKREIINH----RS 71
Query: 269 INHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR 328
+ H +IV+ L +V EY S G L I + L
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------- 124
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISR-SIPNDKTHLT 385
++G V+Y H+ + + HRD+K N LLD + K++DFG S+ S+ + +
Sbjct: 125 ----ISG-VSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---P 173
Query: 386 TTIQGTFGYLDPEYFQSSQFTDK-SDVYSFGVVLLELLTGKKPICFARVEEERNL 439
+ GT Y+ PE ++ K +DV+S GV L +L G P F EE +N
Sbjct: 174 KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 226
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 47/241 (19%)
Query: 216 DNYNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI--DKTQIHQFINEVVILSQIN 270
D Y +G G +G V Y + + +VA+K+ + D + + E+ IL+++N
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKL--EKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
H H+VK+L + +V E + I D L+ L + +
Sbjct: 111 HDHVVKVLDIVIPKDV-----EKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT---LL 162
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI------------- 377
+ V Y+HS+ I HRD+K +N L++ S KV DFG++R++
Sbjct: 163 YNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 378 -----------PNDKTHLTTTIQG---TFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELL 422
P+ K L + G T Y PE +T+ DV+S G + ELL
Sbjct: 220 PREDDMNLVTFPHTKN-LKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Query: 423 T 423
Sbjct: 279 N 279
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+++ + +T + + E+ IL + H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 137
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 138 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL H +I+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 137
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 221 SRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQ-IHQFINEVVILSQINHRHIVKLL 278
S LGQG V++G G + A+K I + + + E +L ++NH++IVKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 279 GCCLETEV--PVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
ET VL+ E+ G+L + + L L +V G
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR---------DVVGG 124
Query: 337 VAYMHSSASIPIFHRDIKSSNILL----DDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
+ ++ + I HR+IK NI+ D + K++DFG +R + +D+ + + GT
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV--XLYGTE 179
Query: 393 GYLDPEYFQSS--------QFTDKSDVYSFGVVLLELLTGKKP 427
YL P+ ++ + ++ D++S GV TG P
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 221 SRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQ-IHQFINEVVILSQINHRHIVKLL 278
S LGQG V++G G + A+K I + + + E +L ++NH++IVKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 279 GCCLETEV--PVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
ET VL+ E+ G+L + + L L +V G
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR---------DVVGG 124
Query: 337 VAYMHSSASIPIFHRDIKSSNILL----DDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
+ ++ + I HR+IK NI+ D + K++DFG +R + +D+ + ++ GT
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV--SLYGTE 179
Query: 393 GYLDPEYFQSS--------QFTDKSDVYSFGVVLLELLTGKKP 427
YL P+ ++ + ++ D++S GV TG P
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 31/230 (13%)
Query: 205 VFTADELQRATDNYNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QF 259
V AD Y Q + +G G G V + +L G VAVK+ + Q H +
Sbjct: 13 VEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRA 70
Query: 260 INEVVILSQINHRHIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXX 314
E+V+L +NH++I+ LL LE V + + L IH
Sbjct: 71 YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH---------- 120
Query: 315 XXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGIS 374
L E + ++ + ++HS+ I HRD+K SNI++ + K+ DFG++
Sbjct: 121 ----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 375 RSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
R+ + + T T Y PE + D++S G ++ EL+ G
Sbjct: 174 RTACTN--FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEID-KTQIHQFINEVVILSQINHRHIV 275
Y ++G+G +G V + VA+K+ + +T + + E+ IL H +I+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
+ + + YI + ++ LS ++ ++
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQILR 137
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTH--LTTTIQGTFG 393
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H T T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 394 YLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 26/176 (14%)
Query: 260 INEVVILSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
+ EV IL +++ H +I++L LV++ + G L ++ + L
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---------KVTL 121
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI- 377
S +R EV A+ ++ I HRD+K NILLDD + K++DFG S +
Sbjct: 122 SEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQ------FTDKSDVYSFGVVLLELLTGKKP 427
P +K ++ GT YL PE + S + + D++S GV++ LL G P
Sbjct: 176 PGEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 26/176 (14%)
Query: 260 INEVVILSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
+ EV IL +++ H +I++L LV++ + G L ++ + L
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---------KVTL 108
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI- 377
S +R EV A+ ++ I HRD+K NILLDD + K++DFG S +
Sbjct: 109 SEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLD 162
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQ------FTDKSDVYSFGVVLLELLTGKKP 427
P +K + GT YL PE + S + + D++S GV++ LL G P
Sbjct: 163 PGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + LS I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S GV++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 253 KTQIHQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXX 312
K++ F NE+ I++ I + + + G + ++YEY+ + ++ D
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF--DEYFFVLD 141
Query: 313 XXXXXLSSLSWENRVRVAC---EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVS 369
+ + C V + +Y+H+ +I HRD+K SNIL+D K+S
Sbjct: 142 KNYTCFIPIQ-----VIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLS 194
Query: 370 DFGISRSIPNDKTHLTTTIQGTFGYLDPEYF--QSSQFTDKSDVYSFGVVLLELLTGKKP 427
DFG S + + K + +GT+ ++ PE+F +SS K D++S G+ L + P
Sbjct: 195 DFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 37/272 (13%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVKRSKEID---KTQIHQFINEVVI 265
E++ D++ + +G+G F V M G + A+K + D + ++ F E +
Sbjct: 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV 114
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
L + R I +L + LV EY G L LS
Sbjct: 115 LVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL---------------LTLLSKFGERI 159
Query: 326 RVRVA----CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK 381
+A E+ A+ +H + HRDIK NILLD +++DFG + D
Sbjct: 160 PAEMARFYLAEIVMAIDSVHRLGYV---HRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216
Query: 382 THLTTTIQGTFGYLDPEYFQS-------SQFTDKSDVYSFGVVLLELLTGKKPICFARVE 434
T + GT YL PE Q+ + + D ++ GV E+ G+ P
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276
Query: 435 EERNLVACFISLAKENQLLEILDARVAKEARE 466
E + + KE+ L ++D V +EAR+
Sbjct: 277 ETYGKIVHY----KEHLSLPLVDEGVPEEARD 304
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 31/233 (13%)
Query: 209 DELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSIVAVKRSK--EIDKTQIHQFINEVV 264
D L RA Y +G+G +G V+K + G VA+KR + ++ I EV
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 265 ILSQIN---HRHIVKLLGCCL------ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+L + H ++V+L C ET++ LV+E++ ++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTY-----------LDK 111
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+ E + ++ + ++HS + HRD+K NIL+ K++DFG++R
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168
Query: 376 SIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
I + + LT+ + T Y PE S + D++S G + E+ +KP+
Sbjct: 169 -IYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKE----IDKTQIHQFIN 261
Q+ D Y+ LG G F V K G+ + ++S+ + + +I +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV IL Q+ H +++ L VL+ E +S G L + SL
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK------------ESL 112
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSI 377
S E ++ V Y+H+ I H D+K NI+L DK K+ DFG++ I
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 EDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + LS I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S GV++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 137
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ--GT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H + T
Sbjct: 138 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEID-KTQIHQFINEVVILSQINHRH 273
Y ++G+G +G V Y + + VA+K+ + +T + + E+ IL + H +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ + + + YI + ++ LS ++ ++
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY---------KLLKTQHLSNDHICYFLYQI 138
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ--GT 391
+ Y+HS+ + HRD+K SN+LL+ K+ DFG++R D H + T
Sbjct: 139 LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 392 FGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGK 425
Y PE +S+ +T D++S G +L E+L+ +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKE----IDKTQIHQFIN 261
Q+ D Y+ LG G F V K G+ + ++S+ + + +I +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV IL Q+ H +++ L VL+ E +S G L + SL
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK------------ESL 112
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSI 377
S E ++ V Y+H+ I H D+K NI+L DK K+ DFG++ I
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 EDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 31/233 (13%)
Query: 209 DELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSIVAVKRSK--EIDKTQIHQFINEVV 264
D L RA Y +G+G +G V+K + G VA+KR + ++ I EV
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 265 ILSQIN---HRHIVKLLGCCL------ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+L + H ++V+L C ET++ LV+E++ ++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTY-----------LDK 111
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+ E + ++ + ++HS + HRD+K NIL+ K++DFG++R
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168
Query: 376 SIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
I + + LT+ + T Y PE S + D++S G + E+ +KP+
Sbjct: 169 -IYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 31/233 (13%)
Query: 209 DELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSIVAVKRSK--EIDKTQIHQFINEVV 264
D L RA Y +G+G +G V+K + G VA+KR + ++ I EV
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 265 ILSQIN---HRHIVKLLGCCL------ETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXX 315
+L + H ++V+L C ET++ LV+E++ ++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTY-----------LDK 111
Query: 316 XXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISR 375
+ E + ++ + ++HS + HRD+K NIL+ K++DFG++R
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168
Query: 376 SIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
I + + LT+ + T Y PE S + D++S G + E+ +KP+
Sbjct: 169 -IYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 26/176 (14%)
Query: 260 INEVVILSQIN-HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
+ EV IL +++ H +I++L LV++ + G L ++ + L
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE---------KVTL 121
Query: 319 SSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI- 377
S +R EV A+ ++ I HRD+K NILLDD + K++DFG S +
Sbjct: 122 SEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQ------FTDKSDVYSFGVVLLELLTGKKP 427
P +K + GT YL PE + S + + D++S GV++ LL G P
Sbjct: 176 PGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKE----IDKTQIHQFIN 261
Q+ D Y+ LG G F V K G+ + ++S+ + + +I +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV IL Q+ H +++ L VL+ E +S G L + SL
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK------------ESL 112
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSI 377
S E ++ V Y+H+ I H D+K NI+L DK K+ DFG++ I
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 EDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 36/258 (13%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVK 276
Y + LG GG G V+ + D VA+K+ D + + E+ I+ +++H +IVK
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 277 L--------------LGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLS 322
+ +G E +V EY+ + + L
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLAN--------------VLEQGPLL 118
Query: 323 WENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLD-DKFSAKVSDFGISRSIPNDK 381
E+ ++ + Y+HS+ + HRD+K +N+ ++ + K+ DFG++R +
Sbjct: 119 EEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY 175
Query: 382 THLTTTIQG--TFGYLDPEYFQS-SQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERN 438
+H +G T Y P S + +T D+++ G + E+LTGK A E+
Sbjct: 176 SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235
Query: 439 LVACFISLAKENQLLEIL 456
L+ I + E E+L
Sbjct: 236 LILESIPVVHEEDRQELL 253
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 321 LSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPND 380
++ E+ + + +VA + ++ S I HRD+ + NILL + K+ DFG++R I +
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCI---HRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 381 KTHLTT-TIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERN 438
++ + ++ PE ++ KSDV+S+GV+L E+ + G P +++E+
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED-- 310
Query: 439 LVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELE 498
F S +E + A E + ++ + C + K+RP ++ +L
Sbjct: 311 ----FCSRLREGMRM---------RAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLG 357
Query: 499 GL 500
L
Sbjct: 358 DL 359
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 28/227 (12%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN-EVV 264
Q+ D Y+ LG G F V K G+ + ++S+ + + I EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
IL Q+ H +I+ L VL+ E +S G L + SLS E
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK------------ESLSEE 115
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSIPND 380
++ V Y+H+ I H D+K NI+L DK K+ DFG++ I +
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 381 KTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 173 VEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKE----IDKTQIHQFIN 261
Q+ D Y+ LG G F V K G+ + ++S+ + + +I +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV IL Q+ H +++ L VL+ E +S G L + SL
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK------------ESL 112
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSI 377
S E ++ V Y+H+ I H D+K NI+L DK K+ DFG++ I
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 EDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 212 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKE----IDKTQIHQFIN 261
Q+ D Y+ LG G F V K G+ + ++S+ + + +I +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
EV IL Q+ H +++ L VL+ E +S G L + SL
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK------------ESL 112
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSI 377
S E ++ V Y+H+ I H D+K NI+L DK K+ DFG++ I
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 378 PNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 170 EDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 221 SRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQFINEVVILSQI-NHRHIVKLL 278
S LG+G + V + L +G AVK ++ + EV L Q +++I++L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 279 GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
+ LV+E + G++ HI + RV +VA A+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQ------------KHFNEREASRVVRDVAAALD 125
Query: 339 YMHSSASIPIFHRDIKSSNILLD--DKFS-AKVSDF--GISRSIPNDKTHLTT----TIQ 389
++H+ I HRD+K NIL + +K S K+ DF G + N T +TT T
Sbjct: 126 FLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 390 GTFGYLDPEYF-----QSSQFTDKSDVYSFGVVLLELLTGKKPI 428
G+ Y+ PE Q++ + + D++S GVVL +L+G P
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 35/244 (14%)
Query: 201 ERAKVFT--ADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQ 258
E AK FT E+Q +++ + +G+G FG V AV + K ++ +
Sbjct: 57 EWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEV-----------AVVKMKNTERIYAMK 105
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHI-----HDHXXXXXXX 313
+N+ +L + C E VLV T H+ H +
Sbjct: 106 ILNKWEMLKRAE--------TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYV 157
Query: 314 XXXXLSSLS-WENRV---RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVS 369
L+ LS +E+++ + V + S + HRDIK N+LLD +++
Sbjct: 158 GGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLA 217
Query: 370 DFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS-----SQFTDKSDVYSFGVVLLELLTG 424
DFG + +D T ++ GT Y+ PE Q+ ++ + D +S GV + E+L G
Sbjct: 218 DFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
Query: 425 KKPI 428
+ P
Sbjct: 278 ETPF 281
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKR-SKEIDK-TQIHQFINEVVILSQINHR 272
D Y +G G +G V G VA+K+ D T + + E+ IL H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 273 HIVKLLGCCLETEVPVLVYE--YISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+I+ + L VP ++ Y+ + +H L+ E+
Sbjct: 115 NIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQ--------IIHSSQPLTLEHVRYFL 165
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI---PNDKTHLTTT 387
++ + YMHS+ + HRD+K SN+L+++ K+ DFG++R + P + + T
Sbjct: 166 YQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 388 IQGTFGYLDPEYFQS-SQFTDKSDVYSFGVVLLELLTGKK 426
T Y PE S ++T D++S G + E+L ++
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 39/246 (15%)
Query: 201 ERAKVFTAD--ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQ 258
E AK FT+ +++ +++ + +G+G FG V AV + K DK +
Sbjct: 57 EWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEV-----------AVVKLKNADKVFAMK 105
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLV---YEYISSGTLSHHIHD----HXXXXX 311
+N+ +L + C E VLV ++I+ TL + D +
Sbjct: 106 ILNKWEMLKRAE--------TACFREERDVLVNGDSKWIT--TLHYAFQDDNNLYLVMDY 155
Query: 312 XXXXXXLSSLS-WENRV---RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAK 367
L+ LS +E+R+ +A V + S + HRDIK NIL+D +
Sbjct: 156 YVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIR 215
Query: 368 VSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS-----SQFTDKSDVYSFGVVLLELL 422
++DFG + D T ++ GT Y+ PE Q+ ++ + D +S GV + E+L
Sbjct: 216 LADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275
Query: 423 TGKKPI 428
G+ P
Sbjct: 276 YGETPF 281
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKR-SKEIDK-TQIHQFINEVVILSQINHR 272
D Y +G G +G V G VA+K+ D T + + E+ IL H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 273 HIVKLLGCCLETEVPVLVYE--YISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
+I+ + L VP ++ Y+ + +H L+ E+
Sbjct: 114 NIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQ--------IIHSSQPLTLEHVRYFL 164
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI---PNDKTHLTTT 387
++ + YMHS+ + HRD+K SN+L+++ K+ DFG++R + P + + T
Sbjct: 165 YQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 388 IQGTFGYLDPEYFQS-SQFTDKSDVYSFGVVLLELLTGKK 426
T Y PE S ++T D++S G + E+L ++
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 35/244 (14%)
Query: 201 ERAKVFT--ADELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQ 258
E AK FT E+Q +++ + +G+G FG V AV + K ++ +
Sbjct: 73 EWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEV-----------AVVKMKNTERIYAMK 121
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHI-----HDHXXXXXXX 313
+N+ +L + C E VLV T H+ H +
Sbjct: 122 ILNKWEMLKRAE--------TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYV 173
Query: 314 XXXXLSSLS-WENRV---RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVS 369
L+ LS +E+++ + V + S + HRDIK N+LLD +++
Sbjct: 174 GGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLA 233
Query: 370 DFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQS-----SQFTDKSDVYSFGVVLLELLTG 424
DFG + +D T ++ GT Y+ PE Q+ ++ + D +S GV + E+L G
Sbjct: 234 DFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
Query: 425 KKPI 428
+ P
Sbjct: 294 ETPF 297
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 126/308 (40%), Gaps = 59/308 (19%)
Query: 216 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKR----SKEIDKTQIHQFINEVVI 265
D+Y LG G F V K G + +R + + + +I + EV I
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER---EVNI 61
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
L +I H +I+ L VL+ E +S G L + + SL+ +
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK------------ESLTEDE 109
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSIPNDK 381
+ ++ V Y+HS I H D+K NI+L DK K+ DFGI+ I +
Sbjct: 110 ATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EA 164
Query: 382 THLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVA 441
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-------------- 210
Query: 442 CFISLAKENQLLEILDARVAKEAREEDIGAMAELA----MRCLRLNSKKRPTMKQVSME- 496
F+ K+ L I + V + EE +ELA R L + K+R T+ Q S+E
Sbjct: 211 -FLGETKQETLTNI--SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQ-SLEH 266
Query: 497 --LEGLRR 502
++ +RR
Sbjct: 267 SWIKAIRR 274
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 216 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKR----SKEIDKTQIHQFINEVVI 265
D+Y LG G F V K G + +R + + + +I + EV I
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER---EVNI 68
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
L +I H +I+ L VL+ E +S G L + + SL+ +
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK------------ESLTEDE 116
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSIPNDK 381
+ ++ V Y+HS I H D+K NI+L DK K+ DFGI+ I +
Sbjct: 117 ATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EA 171
Query: 382 THLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 32/233 (13%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGS--IVAVK---RSKEIDKTQIHQFINEVVILSQI 269
+D Y + +G G FG V + M S +VAVK R ++ID+ + IN +
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSL 72
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H +IV+ L +V EY S G L I + S +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN------------AGRFSEDEARFF 120
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSIPNDKTHLTTT 387
++ V+Y H+ + + HRD+K N LLD + K+ FG S+S +T
Sbjct: 121 FQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV 177
Query: 388 IQGTFGYLDPEYFQSSQFTDK-SDVYSFGVVLLELLTGKKPICFARVEEERNL 439
GT Y+ PE ++ K +DV+S GV L +L G P F EE +N
Sbjct: 178 --GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 226
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 216 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKR----SKEIDKTQIHQFINEVVI 265
D+Y LG G F V K G + +R + + + +I + EV I
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIER---EVNI 82
Query: 266 LSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWEN 325
L +I H +I+ L VL+ E +S G L + + SL+ +
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK------------ESLTEDE 130
Query: 326 RVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSIPNDK 381
+ ++ V Y+HS I H D+K NI+L DK K+ DFGI+ I +
Sbjct: 131 ATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EA 185
Query: 382 THLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ I GT ++ PE ++D++S GV+ LL+G P
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF---SAKVSDFGISRSIPNDKTH 383
+R+ ++ V Y+H + I H D+K NILL + K+ DFG+SR I +
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE- 189
Query: 384 LTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACF 443
I GT YL PE T +D+++ G++ LLT P
Sbjct: 190 -LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF--------------- 233
Query: 444 ISLAKENQLLEILDARVAKEAREEDIGAMAELAM----RCLRLNSKKRPT 489
+ ++NQ + ++V + EE ++++LA L N +KRPT
Sbjct: 234 --VGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT 281
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 99/238 (41%), Gaps = 42/238 (17%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGS--IVAVK---RSKEIDKTQIHQFINEVVILSQI 269
+D Y + +G G FG V + M S +VAVK R ++ID+ + IN +
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSL 72
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H +IV+ L +V EY S G L I + S +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN------------AGRFSEDEARFF 120
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSI-----PNDKT 382
++ V+Y H+ + + HRD+K N LLD + K+ FG S+S P D
Sbjct: 121 FQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV 177
Query: 383 HLTTTIQGTFGYLDPEYFQSSQFTDK-SDVYSFGVVLLELLTGKKPICFARVEEERNL 439
GT Y+ PE ++ K +DV+S GV L +L G P F EE +N
Sbjct: 178 -------GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 226
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + LS I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + LS I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 24/171 (14%)
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
++A + A+ ++HS S+ HRD+K SN+L++ K DFGIS + +D
Sbjct: 140 KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 388 IQGTFGYLDPEY----FQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACF 443
G Y PE ++ KSD++S G+ +EL + P +
Sbjct: 198 --GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP---------------Y 240
Query: 444 ISLAKE-NQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
S QL ++++ + ++ + +CL+ NSK+RPT ++
Sbjct: 241 DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 215 TDNYNQSRFLGQGGFGTVYKGMLPDGS--IVAVK---RSKEIDKTQIHQFINEVVILSQI 269
+D Y + +G G FG V + M S +VAVK R ++I + IN +
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIAANVKREIINH----RSL 72
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRV 329
H +IV+ L +V EY S G L I + S +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN------------AGRFSEDEARFF 120
Query: 330 ACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSIPNDKTHLTTT 387
++ V+Y H+ + + HRD+K N LLD + K+ DFG S+S +T
Sbjct: 121 FQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV 177
Query: 388 IQGTFGYLDPEYFQSSQFTDK-SDVYSFGVVLLELLTGKKPICFARVEEERNL 439
GT Y+ PE ++ K +DV+S GV L +L G P F EE +N
Sbjct: 178 --GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 213 RATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFINEVVIL 266
R T+ Y LG+G F V + G I+ K+ D ++ + E I
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARIC 64
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
+ H +IV+L E L+++ ++ G L I S +
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI------------VAREYYSEADA 112
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF---SAKVSDFGISRSIPNDKTH 383
++ AV + H + + HR++K N+LL K + K++DFG++ + ++
Sbjct: 113 SHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-Q 168
Query: 384 LTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
GT GYL PE + + D+++ GV+L LL G P
Sbjct: 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 34/229 (14%)
Query: 214 ATDN-YNQSRF-----LGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN 261
T+N Y QS + LG+G F V + G I+ K+ D ++ +
Sbjct: 14 GTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER--- 70
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
E I + H +IV+L E L+++ ++ G L I
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI------------VAREYY 118
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKF---SAKVSDFGISRSIP 378
S + ++ AV + H + + HRD+K N+LL K + K++DFG++ +
Sbjct: 119 SEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE 175
Query: 379 NDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
++ GT GYL PE + + D+++ GV+L LL G P
Sbjct: 176 GEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + LS I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFIN-EVVILSQINHRHIVK 276
Y + +G G FG V++ L + VA+K+ Q +F N E+ I+ + H ++V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-----LQDKRFKNRELQIMRIVKHPNVVD 96
Query: 277 LLGCCLET-----EVPV-LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
L EV + LV EY+ + H L L +R
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETV--YRASRHYAKLKQTMPMLLIKLYMYQLLR-- 152
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA-KVSDFGISRSIPNDKTHLTTTIQ 389
++AY+HS I I HRDIK N+LLD K+ DFG ++ + + +++
Sbjct: 153 -----SLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICS 204
Query: 390 GTFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE F ++ +T D++S G V+ EL+ G+
Sbjct: 205 RY--YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + LS I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 85 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQM 135
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQGTF 392
AV Y+H + I HRD+K N+LL + K++DFG S+ + +T L T+ GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 393 GYLDPEYFQS---SQFTDKSDVYSFGVVLLELLTGKKPICFARVE 434
YL PE S + + D +S GV+L L+G P R +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDG-SIVAVKRSK--EIDKTQIHQFINEVVILSQINHRHI 274
Y + +G+G +GTV+K + IVA+KR + + D+ + E+ +L ++ H++I
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+L + LV+E+ + + L E ++
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN------------GDLDPEIVKSFLFQLL 111
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQGTF 392
+ + HS + HRD+K N+L++ K++DFG++R+ IP + T
Sbjct: 112 KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIP---VRCYSAEVVTL 165
Query: 393 GYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
Y P+ F + ++ D++S G + EL +P+
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQGTF 392
AV Y+H + I HRD+K N+LL + K++DFG S+ + +T L T+ GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 393 GYLDPEYFQS---SQFTDKSDVYSFGVVLLELLTGKKPICFARVE 434
YL PE S + + D +S GV+L L+G P R +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQGTF 392
AV Y+H + I HRD+K N+LL + K++DFG S+ + +T L T+ GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 393 GYLDPEYFQS---SQFTDKSDVYSFGVVLLELLTGKKPICFARVE 434
YL PE S + + D +S GV+L L+G P R +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQGTF 392
AV Y+H + I HRD+K N+LL + K++DFG S+ + +T L T+ GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 186
Query: 393 GYLDPEYFQS---SQFTDKSDVYSFGVVLLELLTGKKPICFARVE 434
YL PE S + + D +S GV+L L+G P R +
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 231
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQGTF 392
AV Y+H + I HRD+K N+LL + K++DFG S+ + +T L T+ GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 179
Query: 393 GYLDPEYFQS---SQFTDKSDVYSFGVVLLELLTGKKPICFARVE 434
YL PE S + + D +S GV+L L+G P R +
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 224
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 19/222 (8%)
Query: 208 ADELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVV 264
A + + Y +G G +G+V G VAVK+ ++ IH + E+
Sbjct: 10 AKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR 69
Query: 265 ILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWE 324
+L + H +++ LL P E + L H+ + L+ +
Sbjct: 70 LLKHMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCAKLTDD 121
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL 384
+ + ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 178
Query: 385 TTTIQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 179 V----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 85 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQM 135
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 336 AVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
AV Y+H + I HRD+K N+LL ++ K++DFG S+ + +T L T+ GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 305
Query: 393 GYLDPEYFQS---SQFTDKSDVYSFGVVLLELLTGKKPICFARVE 434
YL PE S + + D +S GV+L L+G P R +
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 85 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQM 135
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 336 AVAYMHSSASIPIFHRDIKSSNILL---DDKFSAKVSDFGISRSIPNDKTHLTTTIQGTF 392
AV Y+H + I HRD+K N+LL ++ K++DFG S+ + +T L T+ GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 319
Query: 393 GYLDPEYFQS---SQFTDKSDVYSFGVVLLELLTGKKPICFARVE 434
YL PE S + + D +S GV+L L+G P R +
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 364
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 78 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQM 128
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 129 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY 183
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 85 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 135
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + L I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + L I L E
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------------MELDHERMS 130
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 185
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + L I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 82 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 133
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 134 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-- 188
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 189 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + L I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 216 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIV 275
+ Y + LG+G FG V++ + + + ++ T E+ IL+ HR+I+
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 276 KLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
L E V+++E+IS + I+ L+ + V CE
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERIN--------TSAFELNEREIVSYVHQVCE--- 113
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSA--KVSDFGISRSI-PNDKTHLTTTIQGTF 392
A+ ++HS I H DI+ NI+ + S+ K+ +FG +R + P D L T
Sbjct: 114 ALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE-- 168
Query: 393 GYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
Y PE Q + +D++S G ++ LL+G P
Sbjct: 169 -YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKXQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSIPNDKTHLTTTI 388
+ V Y+H+ + HRD+K SNIL D+ S ++ DFG ++ + + L T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
T ++ PE + + D++S GV+L +LTG P
Sbjct: 182 Y-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA 221
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 38/235 (16%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEI-----------DKTQIHQ 258
EL Y RF+ G +G V G+ +G VA+KR D +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
+ E+ +L+ +H +I+ L + E P + Y+ + + L
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR---------------TDL 120
Query: 319 SSLSWENRVRVACEVAGAVAY-----MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGI 373
+ + + R+ ++ + Y +H + HRD+ NILL D + DF +
Sbjct: 121 AQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNL 180
Query: 374 SRSIPND--KTHLTTTIQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
+R D KTH T Y PE Q FT D++S G V+ E+ K
Sbjct: 181 AREDTADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQF----INEVVILSQINHR 272
Y + +GQG FG V+K G VA+K K + + + F + E+ IL + H
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHE 76
Query: 273 HIVKLLGCCLETEVPV--------LVYEYIS---SGTLSHHIHDHXXXXXXXXXXXLSSL 321
++V L+ C P LV+++ +G LS+ L
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN---------------VLVKF 121
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP--- 378
+ RV + + Y+H + I HRD+K++N+L+ K++DFG++R+
Sbjct: 122 TLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178
Query: 379 NDKTHLTTTIQGTFGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGKKPICFARVEEER 437
N + + T Y PE + + D++ G ++ E+ T + PI E+ +
Sbjct: 179 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 38/235 (16%)
Query: 210 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEI-----------DKTQIHQ 258
EL Y RF+ G +G V G+ +G VA+KR D +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 259 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXL 318
+ E+ +L+ +H +I+ L + E P + Y+ + + L
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR---------------TDL 120
Query: 319 SSLSWENRVRVACEVAGAVAY-----MHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGI 373
+ + + R+ ++ + Y +H + HRD+ NILL D + DF +
Sbjct: 121 AQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNL 180
Query: 374 SRSIPND--KTHLTTTIQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
+R D KTH T Y PE Q FT D++S G V+ E+ K
Sbjct: 181 AREDTADANKTHYVTHRW----YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 97 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 148
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 149 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 203
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 204 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 73 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 124
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 125 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 179
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 180 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 82 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 133
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 134 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-- 188
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 189 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 96 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 147
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 148 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 202
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 203 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 78 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 128
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 129 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 183
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQF----INEVVILSQINHR 272
Y + +GQG FG V+K G VA+K K + + + F + E+ IL + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHE 77
Query: 273 HIVKLLGCCLETEVPV--------LVYEYIS---SGTLSHHIHDHXXXXXXXXXXXLSSL 321
++V L+ C P LV+++ +G LS+ L
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSN---------------VLVKF 122
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP--- 378
+ RV + + Y+H + I HRD+K++N+L+ K++DFG++R+
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 379 NDKTHLTTTIQGTFGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGKKPICFARVEEER 437
N + + T Y PE + + D++ G ++ E+ T + PI E+ +
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 79 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 129
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 184
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQF----INEVVILSQINHR 272
Y + +GQG FG V+K G VA+K K + + + F + E+ IL + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHE 77
Query: 273 HIVKLLGCCLETEVPV--------LVYEYIS---SGTLSHHIHDHXXXXXXXXXXXLSSL 321
++V L+ C P LV+++ +G LS+ L
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN---------------VLVKF 122
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP--- 378
+ RV + + Y+H + I HRD+K++N+L+ K++DFG++R+
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 379 NDKTHLTTTIQGTFGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGKKPICFARVEEER 437
N + + T Y PE + + D++ G ++ E+ T + PI E+ +
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 88 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 139
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 140 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV-- 194
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 195 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 84 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 135
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 136 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-- 190
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 191 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 84 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 135
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 136 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-- 190
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 191 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 79 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 129
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 184
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 224 LGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHRHIVKLLGC 280
+G G +G+V G VAVK+ ++ IH + E+ +L + H +++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 281 CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYM 340
P E + L H+ L+ ++ + ++ + Y+
Sbjct: 100 F----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 151
Query: 341 HSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE-Y 399
HS+ I HRD+K SN+ +++ K+ DFG++R ++ T T Y PE
Sbjct: 152 HSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIM 204
Query: 400 FQSSQFTDKSDVYSFGVVLLELLTGK 425
+ D++S G ++ ELLTG+
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 84 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 135
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 136 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV-- 190
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 191 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 218 YNQSRFLGQGGFGTVYKGMLPDG-SIVAVKRSK--EIDKTQIHQFINEVVILSQINHRHI 274
Y + +G+G +GTV+K + IVA+KR + + D+ + E+ +L ++ H++I
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 275 VKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVA 334
V+L + LV+E+ + + L E ++
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN------------GDLDPEIVKSFLFQLL 111
Query: 335 GAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQGTF 392
+ + HS + HRD+K N+L++ K+++FG++R+ IP + T
Sbjct: 112 KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP---VRCYSAEVVTL 165
Query: 393 GYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGKKPI 428
Y P+ F + ++ D++S G + EL +P+
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 86 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 136
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 191
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ + ++ IH + E+ +L
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK 88
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 89 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 140
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 141 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 195
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 196 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKXQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 83 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 134
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 135 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 189
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 190 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 218 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIHQF----INEVVILSQINHR 272
Y + +GQG FG V+K G VA+K K + + + F + E+ IL + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHE 77
Query: 273 HIVKLLGCCLETEVPV--------LVYEYIS---SGTLSHHIHDHXXXXXXXXXXXLSSL 321
++V L+ C P LV+++ +G LS+ L
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN---------------VLVKF 122
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIP--- 378
+ RV + + Y+H + I HRD+K++N+L+ K++DFG++R+
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 379 NDKTHLTTTIQGTFGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGKKPICFARVEEER 437
N + + T Y PE + + D++ G ++ E+ T + PI E+ +
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 84 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 134
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 135 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 189
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 85 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 135
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 85 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 135
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 190
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 84 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 135
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 136 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 190
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 191 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILL--DDKFSAKVSDFGISRS---IPNDKTHLTT 386
++ A+ Y+H+ I HRDIK N L + F K+ DFG+S+ + N + + T
Sbjct: 176 QIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT 232
Query: 387 TIQGTFGYLDPEYFQSSQ--FTDKSDVYSFGVVLLELLTGKKP 427
T GT ++ PE ++ + K D +S GV+L LL G P
Sbjct: 233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 86 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 136
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 191
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL--DDKFSAK-----------VSDF 371
N + + ++A VA++HS + I HRD+K NIL+ +F+A +SDF
Sbjct: 116 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 372 GISRSIPNDKTHLTTTIQ---GTFGYLDPEYFQSS-------QFTDKSDVYSFGVVLLEL 421
G+ + + + ++ T + GT G+ PE + S + T D++S G V +
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 422 LT-GKKPICFARVEEERNLVACFISL 446
L+ GK P + E N++ SL
Sbjct: 233 LSKGKHPFG-DKYSRESNIIRGIFSL 257
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 79 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 130
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 131 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 185
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 186 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 88 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 139
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 140 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 194
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 195 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 82 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 133
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 134 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 188
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 189 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 83 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 134
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 135 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 189
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 190 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 75
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 76 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 127
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 128 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 182
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 183 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 56/313 (17%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVK------RSKEIDKTQIHQFINEVVILSQINHRHIVKL 277
+G+G +G V+ G G VAVK + +T+I+Q + + H +I+
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTV-------LMRHENILGF 96
Query: 278 L-----GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACE 332
+ G T++ L+ +Y +G+L ++ ++L ++ +++A
Sbjct: 97 IAADIKGTGSWTQL-YLITDYHENGSLYDYLKS-------------TTLDAKSMLKLAYS 142
Query: 333 VAGAVAYMH----SSASIP-IFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHL--- 384
+ ++H S+ P I HRD+KS NIL+ + ++D G++ +D +
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 385 TTTIQGTFGYLDPEYFQSS------QFTDKSDVYSFGVVLLELLTGKKPICFARVEEER- 437
T GT Y+ PE S Q +D+YSFG++L E+ ++ + VEE +
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQL 260
Query: 438 ---NLVACFISLAKENQLLEILDARVA---KEAREEDIGAMAELAMRCLRLNSKKRPTMK 491
+LV S +++ I R + + + +E + M +L C N R T
Sbjct: 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTAL 320
Query: 492 QVSMELEGLRRSQ 504
+V L + SQ
Sbjct: 321 RVKKTLAKMSESQ 333
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 100 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 151
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 152 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 206
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 207 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 74 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 125
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 126 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 180
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 181 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 79 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 130
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 131 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 185
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 186 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 222 RFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHRHIVK 276
R +G G +G+V Y L VAVK+ ++ IH + E+ +L + H +++
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 277 LLGC-CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
LL T + Y+ + + +++ +LS E+ + ++
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNN---------IVKCQALSDEHVQFLVYQLLR 134
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
+ Y+HS+ I HRD+K SN+ +++ ++ DFG++R + T T Y
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV----ATRWYR 187
Query: 396 DPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
PE + D++S G ++ ELL GK
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 82 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 133
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 134 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 188
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 189 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 89 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 140
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 141 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 195
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 196 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 79 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 130
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 131 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV-- 185
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 186 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + L I L E
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------------MELDHERMS 131
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + +
Sbjct: 132 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVP 186
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTG 424
T Y PE + + D++S G ++ E++ G
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 89 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 140
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 141 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 195
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 196 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 97 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 148
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 149 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 203
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 204 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 83 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 134
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 135 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV-- 189
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 190 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 96 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 147
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 148 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 202
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 203 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 123 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 173
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 228
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 74 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 125
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 126 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 180
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 181 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 73 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 124
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 125 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 179
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 180 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 222 RFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHRHIVK 276
R +G G +G+V Y L VAVK+ ++ IH + E+ +L + H +++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 277 LLGC-CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAG 335
LL T + Y+ + + +++ +LS E+ + ++
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNN---------IVKCQALSDEHVQFLVYQLLR 142
Query: 336 AVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYL 395
+ Y+HS+ I HRD+K SN+ +++ ++ DFG++R + T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV----ATRWYR 195
Query: 396 DPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
PE + D++S G ++ ELL GK
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEI-DKTQIHQFINEVVILSQINHRH 273
Y + +G G G V Y +L D ++ K S+ ++T + E+V++ +NH++
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 274 IVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEV 333
I+ LL P E L + D +S+ + ++
Sbjct: 123 IISLLNVF----TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-----LLYQM 173
Query: 334 AGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFG 393
+ ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T T
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 228
Query: 394 YLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + + D++S G ++ E++ K
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 79 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 130
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 131 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 185
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 186 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 74
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 75 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 126
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 127 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 181
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 182 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 124 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 179
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 180 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 125 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 180
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 181 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 131 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 186
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 187 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA---KVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 176 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 231
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 232 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 140 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 195
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 196 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 43/295 (14%)
Query: 224 LGQGGFGTV--YKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCC 281
LG+GGF V +G L DG A+KR ++ + E + NH +I++L+ C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 282 LE----TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAV 337
L L+ + GTL + I + L+ + + + + +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEI--------ERLKDKGNFLTEDQILWLLLGICRGL 147
Query: 338 AYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRS--IPNDKTHLTTTIQG----- 390
+H+ HRD+K +NILL D+ + D G I + + T+Q
Sbjct: 148 EAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 391 -TFGYLDPEYF--QSSQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISL 446
T Y PE F QS D ++DV+S G VL ++ G+ P + V ++ + VA L
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP--YDMVFQKGDSVA----L 258
Query: 447 AKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 501
A +NQL + + R A+ +L + ++ +RP + + +LE L+
Sbjct: 259 AVQNQL------SIPQSPRHSS--ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 83 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 134
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++ T
Sbjct: 135 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV-- 189
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 190 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 130 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 185
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 186 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA---KVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 126 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 181
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 182 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 132 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 187
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 188 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA---KVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 225
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 226 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 126 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 181
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 182 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 222 RFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHRHIVK 276
R +G G +G+V Y L VAVK+ ++ IH + E+ +L + H +++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 277 LL-----GCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVAC 331
LL +E V + + L++ + +LS E+ +
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ-------------ALSDEHVQFLVY 138
Query: 332 EVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGT 391
++ + Y+HS+ I HRD+K SN+ +++ ++ DFG++R + T T
Sbjct: 139 QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV----AT 191
Query: 392 FGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
Y PE + D++S G ++ ELL GK
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 33/197 (16%)
Query: 249 KEIDKTQIH---QFINEVVILSQI-NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIH 304
K I+K H + EV +L Q HR++++L+ E + LV+E + G++ HIH
Sbjct: 44 KIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH 103
Query: 305 DHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDK- 363
V +VA A+ ++H+ I HRD+K NIL +
Sbjct: 104 KRRHFNELEASV------------VVQDVASALDFLHNKG---IAHRDLKPENILCEHPN 148
Query: 364 --FSAKVSDFGISRSIP--NDKTHLTT----TIQGTFGYLDPEYF-----QSSQFTDKSD 410
K+ DFG+ I D + ++T T G+ Y+ PE ++S + + D
Sbjct: 149 QVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 411 VYSFGVVLLELLTGKKP 427
++S GV+L LL+G P
Sbjct: 209 LWSLGVILYILLSGYPP 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKF----SAKVSDFGISRSIPNDKTHLTTTI 388
+ V Y+H+ + HRD+K SNIL D+ S ++ DFG ++ + + L T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
T ++ PE + + D++S GV+L LTG P
Sbjct: 182 Y-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFA 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + L I L E
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------------MELDHERMS 134
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 135 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 189
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + + D++S G ++ E++ K
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + L I L E
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------------MELDHERMS 123
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + + T
Sbjct: 124 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 178
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + + D++S G ++ E++ K
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSKEI--DKTQIHQFINEVVILSQI 269
+ DNY +G+G +G VY + + VA+K+ + D + + E+ IL+++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 270 NHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVR- 328
+I++L + ++ YI I D L+ E V+
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVL-----EIADSDLKKLFKTPIFLT----EQHVKT 135
Query: 329 VACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDK-THLTTT 387
+ + ++H S I HRD+K +N LL+ S K+ DFG++R+I +DK H+
Sbjct: 136 ILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVND 192
Query: 388 IQG-----------------------TFGYLDPEY-FQSSQFTDKSDVYSFGVVLLELLT 423
++ T Y PE +T+ D++S G + ELL
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Query: 424 GKK 426
K
Sbjct: 253 MMK 255
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 73 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 124
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++
Sbjct: 125 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-- 179
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 180 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 224 LGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHRHIVKLLGC 280
+G G +G+V + G +AVK+ ++ IH + E+ +L + H +++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 281 CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYM 340
P E + L H+ L+ ++ + ++ + Y+
Sbjct: 119 F----TPATSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 170
Query: 341 HSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPE-Y 399
HS+ I HRD+K SN+ +++ K+ DFG++R ++ T T Y PE
Sbjct: 171 HSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIM 223
Query: 400 FQSSQFTDKSDVYSFGVVLLELLTGK 425
+ D++S G ++ ELLTG+
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL--DDKFSAK-----------VSDF 371
N + + ++A VA++HS + I HRD+K NIL+ +F+A +SDF
Sbjct: 134 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 372 GISRSIPNDKTHLTTTIQ---GTFGYLDPEYFQSS---QFTDKSDVYSFGVVLLELLT-G 424
G+ + + + + + GT G+ PE + S + T D++S G V +L+ G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 425 KKPICFARVEEERNLVACFISL 446
K P + E N++ SL
Sbjct: 251 KHPFG-DKYSRESNIIRGIFSL 271
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 21/229 (9%)
Query: 208 ADELQRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSKEIDKTQIHQFIN 261
AD+ D Y +G+G F V + G IV V +
Sbjct: 16 ADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
E I + H HIV+LL + +V+E++ L I S
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI-----VKRADAGFVYSEA 130
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA---KVSDFGISRSIP 378
+ +R ++ A+ Y H + I HRD+K N+LL K ++ K+ DFG++ +
Sbjct: 131 VASHYMR---QILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQL- 183
Query: 379 NDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ + GT ++ PE + + DV+ GV+L LL+G P
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA----KVSDFGISRSIPNDKTHLTTTI 388
+ V Y+HS + HRD+K SNIL D+ ++ DFG ++ + + L T
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
T ++ PE + + + D++S G++L +L G P
Sbjct: 187 Y-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL--DDKFSAK-----------VSDF 371
N + + ++A VA++HS + I HRD+K NIL+ +F+A +SDF
Sbjct: 134 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 372 GISRSIPNDKTHLTTTIQ---GTFGYLDPEYFQSS---QFTDKSDVYSFGVVLLELLT-G 424
G+ + + + + + GT G+ PE + S + T D++S G V +L+ G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 425 KKPICFARVEEERNLVACFISL 446
K P + E N++ SL
Sbjct: 251 KHPFG-DKYSRESNIIRGIFSL 271
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 214 ATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSK-EIDKTQIH-QFINEVVILSQIN 270
+ D Y + LG+G +G VYK + VA+KR + E ++ + I EV +L ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 271 HRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVA 330
HR+I++L L++EY + L ++ + L L
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQL--------- 141
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA-----KVSDFGISRSIPNDKTHLT 385
V + HS + HRD+K N+LL ++ K+ DFG++R+ T
Sbjct: 142 ---INGVNFCHSRRCL---HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFT 195
Query: 386 TTIQGTFGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGKKPI 428
I T Y PE S+ ++ D++S + E+L K P+
Sbjct: 196 HEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPL 237
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ D+G++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA----KVSDFGISRSIPNDKTHLTTTI 388
+ V Y+HS + HRD+K SNIL D+ ++ DFG ++ + + L T
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 389 QGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPIC 429
T ++ PE + + + D++S G++L +L G P
Sbjct: 187 Y-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 97 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 148
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++
Sbjct: 149 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV-- 203
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 204 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKSQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG+ R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 208 ADELQRATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKE-----IDKTQIHQFIN 261
A+ R T +++ +G G FG+V+K + DG I A+KRSK+ +D+ + +
Sbjct: 1 AEMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY 60
Query: 262 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSL 321
+L Q H H+V+ E + ++ EY + G+L+ I ++ L L
Sbjct: 61 AHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL 118
Query: 322 SWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL 360
+V + Y+H S+ + H DIK SNI +
Sbjct: 119 --------LLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKE-----IDKTQIHQFINEVVIL 266
R T +++ +G G FG+V+K + DG I A+KRSK+ +D+ + + +L
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
Q H H+V+ E + ++ EY + G+L+ I ++ L L
Sbjct: 68 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL----- 120
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL 360
+V + Y+H S+ + H DIK SNI +
Sbjct: 121 ---LLQVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKE-----IDKTQIHQFINEVVIL 266
R T +++ +G G FG+V+K + DG I A+KRSK+ +D+ + + +L
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
Q H H+V+ E + ++ EY + G+L+ I ++ L L
Sbjct: 66 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL----- 118
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL 360
+V + Y+H S+ + H DIK SNI +
Sbjct: 119 ---LLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 31/230 (13%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRH--IVKLLGCC 281
+G+G +G V++G+ G VAVK D+ + E I + + RH I+ +
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 282 LETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMH 341
+ + I+ H H+H L +R+A A +A++H
Sbjct: 72 MTSRNSSTQLWLIT------HYHEHGSLYDFLQRQTLEP---HLALRLAVSAACGLAHLH 122
Query: 342 -----SSASIPIFHRDIKSSNILLDDKFSAKVSDFGIS--RSIPNDKTHLTTTIQ-GTFG 393
+ I HRD KS N+L+ ++D G++ S +D + + GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 394 YLDPEYFQSSQFTD------KSDVYSFGVVLLELLTGKKPICFARVEEER 437
Y+ PE TD +D+++FG+VL E+ ++ I VE+ R
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDYR 230
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 213 RATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSKE-----IDKTQIHQFINEVVIL 266
R T +++ +G G FG+V+K + DG I A+KRSK+ +D+ + + +L
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 267 SQINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENR 326
Q H H+V+ E + ++ EY + G+L+ I ++ L L
Sbjct: 64 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL----- 116
Query: 327 VRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL 360
+V + Y+H S+ + H DIK SNI +
Sbjct: 117 ---LLQVGRGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 100 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 151
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DFG++R ++
Sbjct: 152 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV-- 206
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 207 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIVKLLGC- 280
+G+G FG V++G G VAVK S+E I + V+L H +I+ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 105
Query: 281 ----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
T++ LV +Y G+L +++ + +++ E +++A A
Sbjct: 106 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRY-------------TVTVEGMIKLALSTASG 151
Query: 337 VAYMH-----SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ-- 389
+A++H + I HRD+KS NIL+ + ++D G+ ++ +D T I
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPN 209
Query: 390 ---GTFGYLDPEYFQSS------QFTDKSDVYSFGVVLLEL 421
GT Y+ PE S + ++D+Y+ G+V E+
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 331 CEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSI-PNDKTHLTTTIQ 389
C++ + Y+HS I H+DIK N+LL + K+S G++ ++ P T Q
Sbjct: 116 CQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 390 GTFGYLDPEYFQS-SQFTD-KSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLA 447
G+ + PE F+ K D++S GV L + TG P E N+ F ++
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF------EGDNIYKLFENIG 226
Query: 448 K 448
K
Sbjct: 227 K 227
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIVKLLGC- 280
+G+G FG V++G G VAVK S+E I + V+L H +I+ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 66
Query: 281 ----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
T++ LV +Y G+L +++ + +++ E +++A A
Sbjct: 67 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRY-------------TVTVEGMIKLALSTASG 112
Query: 337 VAYMH-----SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ-- 389
+A++H + I HRD+KS NIL+ + ++D G+ ++ +D T I
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPN 170
Query: 390 ---GTFGYLDPEYFQSS------QFTDKSDVYSFGVVLLEL 421
GT Y+ PE S + ++D+Y+ G+V E+
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIVKLLGC- 280
+G+G FG V++G G VAVK S+E I + V+L H +I+ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 69
Query: 281 ----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
T++ LV +Y G+L +++ + +++ E +++A A
Sbjct: 70 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRY-------------TVTVEGMIKLALSTASG 115
Query: 337 VAYMH-----SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ-- 389
+A++H + I HRD+KS NIL+ + ++D G+ ++ +D T I
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPN 173
Query: 390 ---GTFGYLDPEYFQSS------QFTDKSDVYSFGVVLLEL 421
GT Y+ PE S + ++D+Y+ G+V E+
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIVKLLGC- 280
+G+G FG V++G G VAVK S+E I + V+L H +I+ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 67
Query: 281 ----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
T++ LV +Y G+L +++ + +++ E +++A A
Sbjct: 68 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRY-------------TVTVEGMIKLALSTASG 113
Query: 337 VAYMH-----SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ-- 389
+A++H + I HRD+KS NIL+ + ++D G+ ++ +D T I
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPN 171
Query: 390 ---GTFGYLDPEYFQSS------QFTDKSDVYSFGVVLLEL 421
GT Y+ PE S + ++D+Y+ G+V E+
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIVKLLGC- 280
+G+G FG V++G G VAVK S+E I + V+L H +I+ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 72
Query: 281 ----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
T++ LV +Y G+L +++ + +++ E +++A A
Sbjct: 73 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRY-------------TVTVEGMIKLALSTASG 118
Query: 337 VAYMH-----SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ-- 389
+A++H + I HRD+KS NIL+ + ++D G+ ++ +D T I
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPN 176
Query: 390 ---GTFGYLDPEYFQSS------QFTDKSDVYSFGVVLLEL 421
GT Y+ PE S + ++D+Y+ G+V E+
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFS---AKVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LT
Sbjct: 124 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCY 179
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D++S GV++ LL G P
Sbjct: 180 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 28/146 (19%)
Query: 325 NRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILL--DDKFSAK-----------VSDF 371
N + + ++A VA++HS + I HRD+K NIL+ +F+A +SDF
Sbjct: 116 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 372 GISRSIPNDKTHLTTTIQ---GTFGYLDPEYFQSS-------QFTDKSDVYSFGVVLLEL 421
G+ + + + + + GT G+ PE + S + T D++S G V +
Sbjct: 173 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 422 LT-GKKPICFARVEEERNLVACFISL 446
L+ GK P + E N++ SL
Sbjct: 233 LSKGKHPFG-DKYSRESNIIRGIFSL 257
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 224 LGQGGFGTVYKGMLPDGSIVAVK--RSKEIDKTQIHQFINEVVILSQINHRHIVKLLGC- 280
+G+G FG V++G G VAVK S+E I + V+L H +I+ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 92
Query: 281 ----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGA 336
T++ LV +Y G+L +++ + +++ E +++A A
Sbjct: 93 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRY-------------TVTVEGMIKLALSTASG 138
Query: 337 VAYMH-----SSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQ-- 389
+A++H + I HRD+KS NIL+ + ++D G+ ++ +D T I
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVRHDSATDTIDIAPN 196
Query: 390 ---GTFGYLDPEYFQSS------QFTDKSDVYSFGVVLLEL 421
GT Y+ PE S + ++D+Y+ G+V E+
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 333 VAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSA---KVSDFGISRSIPNDKTHLTTTIQ 389
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 225
Query: 390 GTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKP 427
+ Y+ PE ++ D +S GV+ LL G P
Sbjct: 226 TPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ DF ++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 31/218 (14%)
Query: 218 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSKEIDKTQIH--QFINEVVILSQINHR 272
Y + +G G G V Y +L VA+K+ + Q H + E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 273 HIVKLLGC-----CLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+I+ LL LE V + + L I L E
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------------MELDHERMS 129
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + ++HS+ I HRD+K SNI++ + K+ DFG++R+ + +
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEP 184
Query: 388 IQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + + D++S G ++ E++ K
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ FG++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 224 LGQGGFGT-VYKGMLPDGSIVAVKRSKEIDKTQIHQFINEVVILSQINHRHIVKLLGCCL 282
LG G GT VY+GM D VAVKR + F + V L + + H + C
Sbjct: 32 LGHGAEGTIVYRGMF-DNRDVAVKRIL----PECFSFADREVQLLRESDEHPNVIRYFCT 86
Query: 283 ETEVPVLVYEYIS----SGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVA 338
E + ++YI+ + TL ++ + L E + + + +A
Sbjct: 87 EKD---RQFQYIAIELCAATLQEYVEQ----------KDFAHLGLEP-ITLLQQTTSGLA 132
Query: 339 YMHSSASIPIFHRDIKSSNILLD-----DKFSAKVSDFGISRSIPNDKTHLT--TTIQGT 391
++HS + I HRD+K NIL+ K A +SDFG+ + + + + + + GT
Sbjct: 133 HLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 392 FGYLDPEYFQS---SQFTDKSDVYSFGVVLLELLT-GKKPICFARVEEERNLVACFISLA 447
G++ PE T D++S G V +++ G P F + SL
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP--FGK------------SLQ 235
Query: 448 KE-NQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQV 493
++ N LL + ED+ A EL + + ++ +KRP+ K V
Sbjct: 236 RQANILLGACSLDCLHPEKHEDVIA-RELIEKMIAMDPQKRPSAKHV 281
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ D G++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 19/219 (8%)
Query: 211 LQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSKEIDKTQIH--QFINEVVILS 267
+ + Y +G G +G+V G VAVK+ ++ IH + E+ +L
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 268 QINHRHIVKLLGCCLETEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRV 327
+ H +++ LL P E + L H+ L+ ++
Sbjct: 77 HMKHENVIGLLDVF----TPARSLEEFNDVYLVTHL----MGADLNNIVKCQKLTDDHVQ 128
Query: 328 RVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTT 387
+ ++ + Y+HS+ I HRD+K SN+ +++ K+ D G++R ++ T
Sbjct: 129 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV-- 183
Query: 388 IQGTFGYLDPE-YFQSSQFTDKSDVYSFGVVLLELLTGK 425
T Y PE + D++S G ++ ELLTG+
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 21/244 (8%)
Query: 204 KVFTADELQRATDNYN-QSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIDKTQIHQFI-N 261
KV + E +R D + + +G+G +G VYK DG K+I+ T I
Sbjct: 8 KVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR 67
Query: 262 EVVILSQINHRHIVKLLGCCLE--TEVPVLVYEYISSGTLSHHIHDHXXXXXXXXXXXLS 319
E+ +L ++ H +++ L L L+++Y + L H I H L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQLP 126
Query: 320 SLSWENRVR-VACEVAGAVAYMHSSASIPIFHRDIKSSNILL----DDKFSAKVSDFGIS 374
V+ + ++ + Y+H++ + HRD+K +NIL+ ++ K++D G +
Sbjct: 127 ----RGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 179
Query: 375 R--SIPNDKTHLTTTIQGTFGYLDPEYFQSSQ-FTDKSDVYSFGVVLLELLTGKKPICFA 431
R + P + TF Y PE ++ +T D+++ G + ELLT +PI
Sbjct: 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHC 238
Query: 432 RVEE 435
R E+
Sbjct: 239 RQED 242
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 29/153 (18%)
Query: 289 LVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPI 348
LV+E + G++ HIH V +VA A+ ++H+ I
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV------------VVQDVASALDFLHNKG---I 132
Query: 349 FHRDIKSSNILLDDK---FSAKVSDFGISRSIP--NDKTHLTT----TIQGTFGYLDPEY 399
HRD+K NIL + K+ DF + I D + ++T T G+ Y+ PE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 400 F-----QSSQFTDKSDVYSFGVVLLELLTGKKP 427
++S + + D++S GV+L LL+G P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,600,785
Number of Sequences: 62578
Number of extensions: 514751
Number of successful extensions: 4322
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 1610
Number of HSP's gapped (non-prelim): 1172
length of query: 537
length of database: 14,973,337
effective HSP length: 103
effective length of query: 434
effective length of database: 8,527,803
effective search space: 3701066502
effective search space used: 3701066502
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)