Query 009342
Match_columns 537
No_of_seqs 296 out of 2255
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 03:01:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 2.7E-89 9.2E-94 737.0 52.1 495 30-532 2-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 2.4E-87 8.3E-92 720.2 51.8 486 34-530 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 2.5E-82 8.4E-87 686.7 46.2 489 30-532 6-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 7.8E-77 2.7E-81 637.3 43.9 458 34-531 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 5.5E-75 1.9E-79 625.6 41.2 452 45-529 7-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 2.3E-71 7.9E-76 601.8 41.4 456 35-529 23-523 (523)
7 1zr6_A Glucooligosaccharide ox 100.0 5.8E-70 2E-74 589.0 43.7 467 28-535 2-484 (503)
8 2ipi_A Aclacinomycin oxidoredu 100.0 1.1E-69 3.7E-74 588.9 45.2 460 32-530 18-520 (521)
9 2y3s_A TAML; oxidoreductase; H 100.0 1.4E-69 4.8E-74 588.3 43.4 451 47-530 33-528 (530)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 4.4E-66 1.5E-70 553.9 39.6 437 46-529 12-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 4.8E-42 1.6E-46 374.0 33.3 219 30-263 29-258 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 8.2E-35 2.8E-39 315.6 36.5 199 69-272 52-260 (524)
13 4feh_A Oxidoreductase DPRE1; a 100.0 1.2E-32 3.9E-37 295.0 33.3 179 70-254 35-218 (481)
14 4bby_A Alkyldihydroxyacetoneph 100.0 2.8E-33 9.6E-38 311.3 23.3 202 71-274 198-408 (658)
15 3pm9_A Putative oxidoreductase 100.0 5.2E-33 1.8E-37 297.5 20.8 205 69-276 42-253 (476)
16 2vfr_A Xylitol oxidase, aldito 100.0 2.5E-31 8.5E-36 281.6 26.9 173 70-254 12-187 (422)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 9.2E-32 3.1E-36 294.2 20.7 195 76-274 135-338 (584)
18 1wvf_A 4-cresol dehydrogenase 100.0 4.8E-31 1.6E-35 286.4 22.1 198 76-278 54-268 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 1.1E-29 3.7E-34 277.5 18.9 198 47-255 9-226 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 3.5E-28 1.2E-32 265.8 25.6 201 76-278 68-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 7.8E-29 2.7E-33 265.6 18.6 188 54-253 11-220 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 1.8E-28 6E-33 266.6 16.4 194 76-275 43-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.6E-26 5.4E-31 234.5 13.5 165 76-252 52-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 4.7E-25 1.6E-29 226.0 14.2 164 76-252 28-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 5.2E-25 1.8E-29 224.7 12.4 160 76-250 46-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 2.3E-23 8E-28 212.8 17.3 163 77-252 13-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 1.9E-22 6.6E-27 199.0 9.4 151 78-251 22-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 1E-19 3.5E-24 174.5 11.3 118 136-260 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 3.7E-06 1.3E-10 83.7 9.1 157 77-251 3-178 (287)
30 1n62_C Carbon monoxide dehydro 97.4 0.00023 7.8E-09 70.7 7.4 155 78-250 4-177 (288)
31 2w3s_A Xanthine dehydrogenase; 97.0 0.0013 4.4E-08 69.5 7.8 152 81-249 179-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 95.8 0.027 9.4E-07 56.1 9.4 156 78-249 9-190 (305)
33 1t3q_C Quinoline 2-oxidoreduct 92.4 0.16 5.4E-06 50.1 6.0 151 77-248 3-174 (288)
34 3hrd_C Nicotinate dehydrogenas 90.2 0.4 1.4E-05 47.3 6.3 75 79-158 3-82 (296)
35 1wvf_A 4-cresol dehydrogenase 86.4 0.9 3.1E-05 48.5 6.5 30 496-525 481-511 (520)
36 1rm6_B 4-hydroxybenzoyl-COA re 83.9 1.8 6.1E-05 43.2 6.8 74 78-159 5-84 (324)
37 4bby_A Alkyldihydroxyacetoneph 80.5 3 0.0001 45.8 7.6 28 495-522 625-653 (658)
38 3unc_A Xanthine dehydrogenase/ 62.7 7.6 0.00026 46.1 5.8 78 78-161 232-313 (1332)
39 1e8g_A Vanillyl-alcohol oxidas 53.3 22 0.00074 38.1 7.0 23 503-525 523-545 (560)
40 2i0k_A Oxidoreductase; MIX alp 50.2 6.8 0.00023 42.0 2.4 23 503-525 533-555 (561)
41 3pm9_A Putative oxidoreductase 50.0 7.2 0.00025 40.9 2.5 29 494-522 442-471 (476)
42 1f0x_A DLDH, D-lactate dehydro 44.6 13 0.00044 40.0 3.5 30 501-531 535-564 (571)
43 1xty_A PTH, peptidyl-tRNA hydr 36.7 33 0.0011 28.6 4.1 41 70-112 48-89 (120)
44 3js8_A Cholesterol oxidase; ch 36.5 13 0.00045 39.6 1.9 23 502-524 511-533 (540)
45 2uuu_A Alkyldihydroxyacetoneph 30.4 20 0.00069 38.6 2.2 27 496-522 552-579 (584)
46 1rzw_A Protein AF2095(GR4); be 27.5 68 0.0023 26.9 4.5 42 70-113 42-84 (123)
47 3zyv_A AOH1; oxidoreductase, m 26.2 34 0.0012 40.6 3.3 77 81-162 242-321 (1335)
48 1wn2_A Peptidyl-tRNA hydrolase 25.6 99 0.0034 25.7 5.2 42 70-113 49-91 (121)
49 2gvs_A Chemosensory protein CS 24.9 27 0.00091 28.7 1.4 14 509-522 84-97 (109)
50 2g2c_A Putative molybdenum cof 23.8 1.2E+02 0.004 26.5 5.7 39 80-118 47-85 (167)
51 1rlk_A Hypothetical protein TA 21.9 1.1E+02 0.0036 25.3 4.6 42 70-113 45-87 (117)
52 1k19_A Chemosensory protein CS 21.7 31 0.0011 28.5 1.2 14 509-522 82-95 (112)
53 2zv3_A PTH, peptidyl-tRNA hydr 21.5 1.1E+02 0.0039 25.0 4.7 37 76-112 47-84 (115)
54 1mkz_A Molybdenum cofactor bio 20.8 1.5E+02 0.0052 25.9 5.8 38 80-117 46-84 (172)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=2.7e-89 Score=736.96 Aligned_cols=495 Identities=52% Similarity=0.959 Sum_probs=423.9
Q ss_pred cchhhHHHHhhhcCC---CCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEE
Q 009342 30 ENHEKFLKCLSLQSD---TISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIR 106 (537)
Q Consensus 30 ~~~~~~~~~l~~~~~---~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~ 106 (537)
...++|.+||+.... ++++.|++|+|+.|+++++++.+|.||+....+.|.+||.|+|++||+++|++|+++++||+
T Consensus 2 ~~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 81 (518)
T 3vte_A 2 NPRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIR 81 (518)
T ss_dssp CHHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred ChhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEE
Confidence 456789999987543 57899999999999999888899999999888999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCccCCCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcC
Q 009342 107 VRSGGHDHEGLSSISDVPFIIIDLINFSEISVDVEDKTAWVESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSG 186 (537)
Q Consensus 107 ~~ggGh~~~g~~~~~~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~g 186 (537)
+||||||+.|.+.....+|++|||++|++|++|+++++++||+|+++++|+++|.++|+ ||.+++|.|++|||||+++|
T Consensus 82 vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~-gl~~~~G~~~~vgvgG~~~g 160 (518)
T 3vte_A 82 TRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNE-NLSFPGGYCPTVGVGGHFSG 160 (518)
T ss_dssp EESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCT-TEECCCCSCTTCBHHHHHHT
T ss_pred EECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCC-CceecCCCCCCeeeeeeeCC
Confidence 99999999987753322499999999999999999999999999999999999999987 48999999999999999999
Q ss_pred CCCCCcccccCchhhheeeEEEEcccCeeeeccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccch-h
Q 009342 187 GGYGALLRKYGAAADHIVDAHMIDVKGRFLNRESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLE-Q 265 (537)
Q Consensus 187 gg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~-~ 265 (537)
||+|+++++||+++|+|+++|||++||++++.+.+|+|||||+||||+|+|||||+++||++|.|+.+..|.+.+.++ +
T Consensus 161 Gg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 240 (518)
T 3vte_A 161 GGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIH 240 (518)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHH
T ss_pred CCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHH
Confidence 999999999999999999999999999999754568999999999855899999999999999998887888777654 5
Q ss_pred HHHHHHHHHHHHHHhhcccceeEEEEeec---------CCeEEEEEEEEeeCCHHhHHHhhhhccccCCCccccccccCh
Q 009342 266 NATKLLNKWQYIADRVHEDLFISPFLFRE---------NSTMVSLFTSLFLGGVDRLLRLMQDSFPELGLTKEDCKEMTF 336 (537)
Q Consensus 266 ~~~~~~~~~~~~~~~~p~~l~~~~~~~~~---------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 336 (537)
++.+++.+||++.+.+|+++++.+.+... +..+.+.+.++|.|+.+++.+.|.+.+++++....++.+++|
T Consensus 241 ~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w 320 (518)
T 3vte_A 241 GLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSW 320 (518)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECH
T ss_pred HHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecch
Confidence 67899999999999999999988776531 134567888999999999999988877788776667889999
Q ss_pred HHHHHHhcccCcc-cc---cchhhccCCC-CCCCCceecccCCCCCCCHHHHHHHHHHHHhcCCCceeEEEEEecCCccc
Q 009342 337 VESIVYLDGFEIR-ES---IDMDVLRGRN-FPKRPFIGKADYLTEPIPEEAFQGIYDIFFEQDQKTNGLLVFFPYGGKIS 411 (537)
Q Consensus 337 ~~~~~~~~~~~~~-~~---~~~~~~~~~~-~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~~~~~~v~~~~~GGav~ 411 (537)
.+.+.+++.+..+ .+ . +.+.++. ..+.+||.||.|+.+++++++++.+++.+.+.+.. .+.+.+.++||+++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~-~~~v~~~~~GGa~~ 397 (518)
T 3vte_A 321 IDTTIFYSGVVNFNTANFKK--EILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVG-AGMYVLYPYGGIME 397 (518)
T ss_dssp HHHHHHTSSSCCC-----CG--GGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTT-TEEEEEEECCGGGG
T ss_pred hhhhhhhhcCCccCCccchh--hhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCC-CeEEEEeecCcccc
Confidence 9988887655432 22 2 3344443 23456788999998889999999999988764332 47899999999999
Q ss_pred cCCCCCCCCcccCCceEEEEEEEEeCCCccchHHHHHHHHHHHHHHhhcccccCCCCceeccccCCccC-CCCCCCCcch
Q 009342 412 EISESEIPYPHRAGNIYTLLYYAEWGQEAIDDAYQRHVNMLRTLFNYMTPYVAKNPRTAYINYRDLDIG-TNNKLGHTSV 490 (537)
Q Consensus 412 ~v~~~~tAf~~R~~~~~~~~~~~~W~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gaYvNy~d~~l~-~~ep~~~~~~ 490 (537)
++++++||||||++++|.+++.+.|.+++ ..+++.+|++++++.+.|+.+..+.|+|+||.|.+++ .+ +++++++
T Consensus 398 ~v~~~~TAf~hR~~~~~~~~~~~~w~~~~---~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~-~~~~~~~ 473 (518)
T 3vte_A 398 EISESAIPFPHRAGIMYELWYTASWEKQE---DNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTN-HASPNNY 473 (518)
T ss_dssp TSCTTSSSCCCCTTCCEEEEEEEEECCTT---THHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCC-TTSCCCH
T ss_pred CCCCCCCcccccCcceEEEEEEEecCCcc---hhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccc-cccccch
Confidence 99999999999985589999999997654 3677899999999999999655568999999998876 32 1245666
Q ss_pred hhhhhhhhhhhcccHHHHHHhHhhcCCCCCCcCCCCCCCCCC
Q 009342 491 QEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPFNL 532 (537)
Q Consensus 491 ~~~~~~~~~YyG~ny~RL~~IK~kYDP~nvF~~~qsI~p~~~ 532 (537)
+.++.|++.|||+||+||++||+||||+|||+++|||+|..-
T Consensus 474 ~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 474 TQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred hhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 677789999999999999999999999999999999998643
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.4e-87 Score=720.17 Aligned_cols=486 Identities=41% Similarity=0.762 Sum_probs=418.5
Q ss_pred hHHHHhhhcCCCCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCC
Q 009342 34 KFLKCLSLQSDTISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHD 113 (537)
Q Consensus 34 ~~~~~l~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~ 113 (537)
+|.+||+......++.|++|+|+.|+++++++.+|.||+....+.|.+||.|+|++||+++|++|+++++||++||||||
T Consensus 1 ~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~ 80 (495)
T 3fw9_A 1 DLLSCLTFNGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHS 80 (495)
T ss_dssp CHHHHHHHTTCCCEEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCC
T ss_pred ChhHHHhhcCCCCCCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcC
Confidence 48899988764347899999999999998778999999998899999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcc
Q 009342 114 HEGLSSISDVPFIIIDLINFSEISVDVEDKTAWVESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALL 193 (537)
Q Consensus 114 ~~g~~~~~~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s 193 (537)
+.|.+...+.+|++|||++|++|++|+++++++||+|+++.+|+++|.++|+ ||.+++|.|++|||||+++|||+|+++
T Consensus 81 ~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~-gl~~~~G~~~~vgigG~~~gGg~G~~~ 159 (495)
T 3fw9_A 81 YEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSS-KLGFTAGWCPTVGTGGHISGGGFGMMS 159 (495)
T ss_dssp TTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCS-SEECCCCSCTTCBHHHHHHTCCCCTTH
T ss_pred CCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcC-CceeccCCCCCCeEeeeccCCCCcccc
Confidence 9988776443589999999999999999999999999999999999999976 488999999999999999999999999
Q ss_pred cccCchhhheeeEEEEcccCeeeeccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccch-hHHHHHHH
Q 009342 194 RKYGAAADHIVDAHMIDVKGRFLNRESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLE-QNATKLLN 272 (537)
Q Consensus 194 ~~~G~~~d~v~~~~vV~a~G~~~~~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~ 272 (537)
++||+.+|+|++++||++||++++++.+++|||||+|||++|+|||||+++||++|.|+.+..+.+.++++ +++.+++.
T Consensus 160 ~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~ 239 (495)
T 3fw9_A 160 RKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLH 239 (495)
T ss_dssp HHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHH
T ss_pred cCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHH
Confidence 99999999999999999999999855568999999999665899999999999999999887887777654 56789999
Q ss_pred HHHHHHHhhcccceeEEEEeecCCeEEEEEEEEeeCCHHhHHHhhhhccccCCCccccccccChHHHHHHhcccCccccc
Q 009342 273 KWQYIADRVHEDLFISPFLFRENSTMVSLFTSLFLGGVDRLLRLMQDSFPELGLTKEDCKEMTFVESIVYLDGFEIRESI 352 (537)
Q Consensus 273 ~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (537)
.|+++.+.+|+++++.+...+..+...+.+.++|.|+.+++.+.|.+.++++++...++.+++|.+...+++..+. .
T Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~ 316 (495)
T 3fw9_A 240 KWQFVAEELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET---V 316 (495)
T ss_dssp HHHHHHHHSCTTEEEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC---G
T ss_pred HHHHHHhcCChhHeEEEEEcCCCCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc---h
Confidence 9999999999999887765433455667888999999999999888877888776677889999998877754321 1
Q ss_pred chhhccCCC-C-CCCCceecccCCCCCCCHHHHHHHHHHHHhcCCCceeEEEEEecCCccccCCCCCCCCcccCCceEEE
Q 009342 353 DMDVLRGRN-F-PKRPFIGKADYLTEPIPEEAFQGIYDIFFEQDQKTNGLLVFFPYGGKISEISESEIPYPHRAGNIYTL 430 (537)
Q Consensus 353 ~~~~~~~~~-~-~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~~~~~~v~~~~~GGav~~v~~~~tAf~~R~~~~~~~ 430 (537)
+.+.++. . ++.+|+.||.|+.+++++++++.+++.+.+.+. ..+.++++||+++++++++|||+||++++|.+
T Consensus 317 --~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~---~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~ 391 (495)
T 3fw9_A 317 --SQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN---GFIALNGFGGQMSKISSDFTPFPHRSGTRLMV 391 (495)
T ss_dssp --GGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT---EEEEEEECCGGGGTSCTTTSSCCCCTTCCEEE
T ss_pred --hhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC---cEEEecccCCccccCCCCCCCccccCccceEE
Confidence 2233432 1 346788999999988999999999999876543 67899999999999999999999998568999
Q ss_pred EEEEEeCCCccchHHHHHHHHHHHHHHhhcccccCCCCceeccccCCccCCCCCC-----CCcchhhhhhhhhhhhcccH
Q 009342 431 LYYAEWGQEAIDDAYQRHVNMLRTLFNYMTPYVAKNPRTAYINYRDLDIGTNNKL-----GHTSVQEASVWGKKYFKNNF 505 (537)
Q Consensus 431 ~~~~~W~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gaYvNy~d~~l~~~ep~-----~~~~~~~~~~~~~~YyG~ny 505 (537)
++.+.|.++.+ +..+++.+|++++++.+.|+.+..++++|+||.|.+++.+ +. +|++++.++.|++.|||+||
T Consensus 392 ~~~~~w~~~~~-~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~-~~~~~~~~~~~~~~~~~w~~~Yyg~n~ 469 (495)
T 3fw9_A 392 EYIVAWNQSEQ-KKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGI-DWGNKTVVNNAIEISRSWGESYFLSNY 469 (495)
T ss_dssp EEEEEECGGGG-GGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCC-CTTCHHHHHTHHHHHHHHHHHHHGGGH
T ss_pred EEEEecCCCCc-chhHHHHHHHHHHHHHHhhhccCCCcccccCccCcccccc-ccccccccccccchhhhhHHHHhHhHH
Confidence 99999976432 3467788999999999999976556789999999887621 10 02445556689999999999
Q ss_pred HHHHHhHhhcCCCCCCcCCCCCCCC
Q 009342 506 YRLVHVKTMVDPENFFRNEQSIPPF 530 (537)
Q Consensus 506 ~RL~~IK~kYDP~nvF~~~qsI~p~ 530 (537)
+||++||+||||+|||+++|||||.
T Consensus 470 ~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 470 ERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 9999999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2.5e-82 Score=686.72 Aligned_cols=489 Identities=43% Similarity=0.812 Sum_probs=402.8
Q ss_pred cchhhHHHHhhhcCCCCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEc
Q 009342 30 ENHEKFLKCLSLQSDTISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRS 109 (537)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g 109 (537)
+..++|.+||+.... .+.|++|+++.|.+.+.++.+|.||+....++|.+||.|+|++||+++|++|+++++||+|||
T Consensus 6 ~~~~~f~~~L~~~~~--~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~ 83 (500)
T 3tsh_A 6 AAKEDFLGCLVKEIP--PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRS 83 (500)
T ss_dssp ---CHHHHHHHHHSC--GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEES
T ss_pred ccHHHHHHHHHhhCC--CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 456889999988652 567889999999999988999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccC--CCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCC
Q 009342 110 GGHDHEGLSSIS--DVPFIIIDLINFSEISVDVEDKTAWVESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGG 187 (537)
Q Consensus 110 gGh~~~g~~~~~--~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~gg 187 (537)
||||+.|.+.+. .+++++|||++||+|++|+++++++||+|++++||+++|.++|+. +.+++|.|++||+||+++||
T Consensus 84 gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~-~~~~~g~~~~vgvgG~~~~g 162 (500)
T 3tsh_A 84 GGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT-LAFPAGVCPTIGVGGNFAGG 162 (500)
T ss_dssp SCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTT-EECCCCSSTTSBHHHHHHTC
T ss_pred CCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCC-cccCCCCCCCceecCccccc
Confidence 999999876542 135999999999999999999999999999999999999999976 88999999999999999999
Q ss_pred CCCCcccccCchhhheeeEEEEcccCeeeeccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccchhHH
Q 009342 188 GYGALLRKYGAAADHIVDAHMIDVKGRFLNRESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLEQNA 267 (537)
Q Consensus 188 g~g~~s~~~G~~~d~v~~~~vV~a~G~~~~~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~~~~ 267 (537)
|+|+++++||+++|||+++||||+||++++++.+++|||||+||||+|+|||||+++||++|.|+.+..+.+.+...+.+
T Consensus 163 g~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~ 242 (500)
T 3tsh_A 163 GFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA 242 (500)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTH
T ss_pred cCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHH
Confidence 99999999999999999999999999999866678999999999887899999999999999999887777766666667
Q ss_pred HHHHHHHHHHHHhhcccceeEEEEeecCCeEEEEEEEEeeCCHHhHHHhhhhccccCCCccccccccChHHHHHHhcccC
Q 009342 268 TKLLNKWQYIADRVHEDLFISPFLFRENSTMVSLFTSLFLGGVDRLLRLMQDSFPELGLTKEDCKEMTFVESIVYLDGFE 347 (537)
Q Consensus 268 ~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 347 (537)
.+++..|+.+.+.+|+++...+.... +...+..+|.|+.+++.+.+.+.++.++.....+..++|.+...+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 318 (500)
T 3tsh_A 243 VDIINKWQVVAPQLPADLMIRIIAQG----PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGH 318 (500)
T ss_dssp HHHHHHHHHHGGGSCTTEEEEEEESS----SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhccChhhEEEEEecC----CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhcc
Confidence 88999999999999999877665532 24566788999999888887777777776666667788888665443211
Q ss_pred cccccchhhccCCC-CCCCCceecccCCCCCCCHHHHHHHHHHHHhcCCCceeEEEEEecCCccccCCCCCCCCcccCCc
Q 009342 348 IRESIDMDVLRGRN-FPKRPFIGKADYLTEPIPEEAFQGIYDIFFEQDQKTNGLLVFFPYGGKISEISESEIPYPHRAGN 426 (537)
Q Consensus 348 ~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~~~~~~v~~~~~GGav~~v~~~~tAf~~R~~~ 426 (537)
..... +.+.++. ....+.+.++.+..++++++.++.+++.+...+. ...+.+.++||+++++++++|+|+||++.
T Consensus 319 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Gga~~~~~~~ata~~~R~~~ 394 (500)
T 3tsh_A 319 RDALE--DDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG--AGIMIFDPYGATISATPESATPFPHRKGV 394 (500)
T ss_dssp SSCHH--HHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT--CCEEEEEECCHHHHHSCTTSSSCCCCTTC
T ss_pred ccccc--cccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC--ceEEEEcccCccccCCCCccCcCcccCCc
Confidence 11111 2222332 2234455666777777888888877776654443 35667889999999999999999999977
Q ss_pred eEEEEEEEEeCCCccchHHHHHHHHHHHHHHhhcccccCCCCceeccccCCccCCCCCC-CCcchhhhhhhhhhhhcccH
Q 009342 427 IYTLLYYAEWGQEAIDDAYQRHVNMLRTLFNYMTPYVAKNPRTAYINYRDLDIGTNNKL-GHTSVQEASVWGKKYFKNNF 505 (537)
Q Consensus 427 ~~~~~~~~~W~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gaYvNy~d~~l~~~ep~-~~~~~~~~~~~~~~YyG~ny 505 (537)
++++++...|.+++. +++..+|++++++.+.++....+.++|+||+|.+++.++.. ....+...+.|++.|||+||
T Consensus 395 l~~i~~~~~w~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny 471 (500)
T 3tsh_A 395 LFNIQYVNYWFAPGA---AAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNF 471 (500)
T ss_dssp CEEEEEEEEECSTTC---CHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGH
T ss_pred EEEEEEEEecCCcch---hHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHHH
Confidence 789999999988765 45668999999999999876566799999999987632110 00122234679999999999
Q ss_pred HHHHHhHhhcCCCCCCcCCCCCCCCCC
Q 009342 506 YRLVHVKTMVDPENFFRNEQSIPPFNL 532 (537)
Q Consensus 506 ~RL~~IK~kYDP~nvF~~~qsI~p~~~ 532 (537)
+||++||+||||+|+|+++|||||..+
T Consensus 472 ~RL~~IK~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 472 ERLAITKGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp HHHHHHHHHHCTTCCSCCTTSCCCCCC
T ss_pred HHHHHHHHHhCcccccCCCCCCCCCCC
Confidence 999999999999999999999998654
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=7.8e-77 Score=637.28 Aligned_cols=458 Identities=24% Similarity=0.426 Sum_probs=370.7
Q ss_pred hHHHHhhhcCCCCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCC
Q 009342 34 KFLKCLSLQSDTISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHD 113 (537)
Q Consensus 34 ~~~~~l~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~ 113 (537)
+|.+||+.+ ...|++|+|+.|+++++ . |+......|.+||.|+|++||+++|++|+++++||++||||||
T Consensus 2 ~l~~cl~~~----~~~v~~p~~~~y~~~~~--~----~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~ 71 (473)
T 3rja_A 2 AIEACLSAA----GVPIDIPGTADYERDVE--P----FNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHS 71 (473)
T ss_dssp HHHHHHHHT----TCCBCCTTSHHHHHHTC--C----SBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCC
T ss_pred hHHHHHHhC----CCcEECCCCCchHHHHH--H----hhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 588999886 35699999999998743 3 4444456999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEEEecCcccEE-EeCCCCeEEEcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCc
Q 009342 114 HEGLSSISDVPFIIIDLINFSEIS-VDVEDKTAWVESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGAL 192 (537)
Q Consensus 114 ~~g~~~~~~~~gividl~~l~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~ 192 (537)
+.+.+....+++++|||++|++|. +|+++++++||+|+++++|+++|.++|. +.++.|.|++|||||+++|||+|++
T Consensus 72 ~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~--~~~p~G~~~~vgvgG~~~ggg~G~~ 149 (473)
T 3rja_A 72 YASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKYG--RAISHGTCPGVGISGHFAHGGFGFS 149 (473)
T ss_dssp TTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHS--EECCCCSCTTCBHHHHHHTCCCCTT
T ss_pred CCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCC--EEeccCCCCCcEeeeeccCCCCCcc
Confidence 986554322358999999999996 9999999999999999999999999982 6789999999999999999999999
Q ss_pred ccccCchhhheeeEEEEcccCeeee-ccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccch--hHHHH
Q 009342 193 LRKYGAAADHIVDAHMIDVKGRFLN-RESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLE--QNATK 269 (537)
Q Consensus 193 s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~--~~~~~ 269 (537)
+++||+++|+|+++|||++||++++ +..+++|||||+|||+ |+|||||+++||++|.|+.+..+.+.+.+. +++.+
T Consensus 150 ~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~ 228 (473)
T 3rja_A 150 SHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALK 228 (473)
T ss_dssp HHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHH
T ss_pred cccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHH
Confidence 9999999999999999999999997 6677999999999997 899999999999999998777777777654 34688
Q ss_pred HHHHHHHHHH-hhcccceeEEEEeecCCeEEEEEEEEeeCCHHhHHHhhhhccccCC-Ccccccc-ccChHHHHHHhccc
Q 009342 270 LLNKWQYIAD-RVHEDLFISPFLFRENSTMVSLFTSLFLGGVDRLLRLMQDSFPELG-LTKEDCK-EMTFVESIVYLDGF 346 (537)
Q Consensus 270 ~~~~~~~~~~-~~p~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~ 346 (537)
++++|+++.. ++|+++++.+.+.+. . .+.+.++|.|+.+++.+.+++++...+ +...++. +++|.+...++...
T Consensus 229 ~~~~~~~~~~~~~p~~l~~~~~~~~~-~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 305 (473)
T 3rja_A 229 GIEAVEDYARWVAPREVNFRIGDYGA-G--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNF 305 (473)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEEESSS-S--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSS
T ss_pred HHHHHHHHhhhCCChhHEEEEEEcCC-C--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcC
Confidence 9999999988 899999987776521 2 267788999999999998887543333 3445677 89999987665431
Q ss_pred CcccccchhhccCCCCCCCCceecccCCCCCCCHHHHHHHHHHHHhcCC-C--ceeEEEEEecCC---ccccCCCCCCCC
Q 009342 347 EIRESIDMDVLRGRNFPKRPFIGKADYLTEPIPEEAFQGIYDIFFEQDQ-K--TNGLLVFFPYGG---KISEISESEIPY 420 (537)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~-~--~~~~v~~~~~GG---av~~v~~~~tAf 420 (537)
. +. +..... ....++.|+.+.. ++++++++.+++.+.+... . ..+.++++++|| +++++++++|||
T Consensus 306 ~---~~--~~~~~~--~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf 377 (473)
T 3rja_A 306 D---HV--DFITPQ--PVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAY 377 (473)
T ss_dssp S---CC--CCSSCC--CCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSC
T ss_pred C---Cc--ccccCC--CCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCcc
Confidence 1 11 111000 1245667787765 6999999999998865321 1 234678999998 788899999999
Q ss_pred cccCCceEEEEEEEEeCC-CccchHHHHHHHHHHHHHHhhcccccCCCCceeccccCCccCCCCCCCCcchhhhhhhhhh
Q 009342 421 PHRAGNIYTLLYYAEWGQ-EAIDDAYQRHVNMLRTLFNYMTPYVAKNPRTAYINYRDLDIGTNNKLGHTSVQEASVWGKK 499 (537)
Q Consensus 421 ~~R~~~~~~~~~~~~W~~-~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gaYvNy~d~~l~~~ep~~~~~~~~~~~~~~~ 499 (537)
|||+ ++|.+++.+.|.+ +.. .++..+|++++++.+.+.....+.|+|+||+|.+++ .+.|++.
T Consensus 378 ~hR~-~~~~~~~~~~w~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~------------~~~~~~~ 441 (473)
T 3rja_A 378 PHRD-KLWLIQFYDRYDNNQTY---PETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD------------RDYATKV 441 (473)
T ss_dssp CCTT-CSEEEEEEEEECTTSCC---CTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC------------HHHHHHH
T ss_pred ccCC-ccEEEEEEEEeCCCCcc---chHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc------------chhHHHH
Confidence 9999 6899999999964 322 223356776666655433222245899999998754 1369999
Q ss_pred hhcccHHHHHHhHhhcCCCCCCcCCCCCCCCC
Q 009342 500 YFKNNFYRLVHVKTMVDPENFFRNEQSIPPFN 531 (537)
Q Consensus 500 YyG~ny~RL~~IK~kYDP~nvF~~~qsI~p~~ 531 (537)
|||+||+||++||+||||+|+|+++|||+|.+
T Consensus 442 yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 442 YYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 99999999999999999999999999999864
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=5.5e-75 Score=625.63 Aligned_cols=452 Identities=21% Similarity=0.352 Sum_probs=355.0
Q ss_pred CCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCC
Q 009342 45 TISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVP 124 (537)
Q Consensus 45 ~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~ 124 (537)
++.+.|++|+|+.|+++++ .||.|| ...|.+||.|+|++||+++|++|+++++||++|||||++.+.+...+ +
T Consensus 7 s~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~ 79 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-R 79 (501)
T ss_dssp --CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-C
T ss_pred cCCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-C
Confidence 4689999999999999863 566666 45999999999999999999999999999999999999998776543 4
Q ss_pred eEEEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHHH-hcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhhe
Q 009342 125 FIIIDLINFSEISVDVEDKTAWVESGATVGQLNYRIAE-KSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHI 203 (537)
Q Consensus 125 gividl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v 203 (537)
|++|||++||+|++|+++++++||+|+++++|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|
T Consensus 80 gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G---l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v 156 (501)
T 3pop_A 80 DLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN---AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHL 156 (501)
T ss_dssp SEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS---BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGE
T ss_pred EEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC---eEeCCCCCCCceEeeccccCCCcccccccccHHHhE
Confidence 89999999999999999999999999999999999974 67 568999999999999999999999999999999999
Q ss_pred eeEEEEc--ccCe--eee----ccCCCCchhhhhhhccCCceEEEEEEEEEE----------EecC-CeEEEEEEeccch
Q 009342 204 VDAHMID--VKGR--FLN----RESMGEDLFWAIRGGGGASFGIIVSWKINL----------VAVP-STVTVFAVPRTLE 264 (537)
Q Consensus 204 ~~~~vV~--a~G~--~~~----~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~----------~p~~-~~~~~~~~~~~~~ 264 (537)
+++|||+ +||+ +++ ++.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|++.
T Consensus 157 ~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~ 236 (501)
T 3pop_A 157 HAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWA 236 (501)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGG
T ss_pred EEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchh
Confidence 9999999 8999 443 235789999999999668999999999999 6654 4566666666542
Q ss_pred ----hHHHHHHHHHHHHHH--hhcccc----eeEEEEeec-CCeEEEEEEEEeeCCHHhHHHhhhhcccc------CCCc
Q 009342 265 ----QNATKLLNKWQYIAD--RVHEDL----FISPFLFRE-NSTMVSLFTSLFLGGVDRLLRLMQDSFPE------LGLT 327 (537)
Q Consensus 265 ----~~~~~~~~~~~~~~~--~~p~~l----~~~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~l~~~~~~------l~~~ 327 (537)
+.+.++++.|+++.. ..|++. +..+.+... .+ .+.+..+|.|+.+++.+.+++++.. +.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~ 314 (501)
T 3pop_A 237 MIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHVSSG--VLQLMVQQDADVDPEGEILARFVASLTEGTGVVGI 314 (501)
T ss_dssp GCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECGGGC--EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCE
T ss_pred hcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCCCCC--eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCcc
Confidence 234678888888875 345543 233333221 12 2445567788877765556554321 2222
Q ss_pred cccccccChHHHHHHhcccCcccccchhhccCCCCCCCCceecccCCCCCCCHHHHHHHHHHHHhcCCCceeEEEEEecC
Q 009342 328 KEDCKEMTFVESIVYLDGFEIRESIDMDVLRGRNFPKRPFIGKADYLTEPIPEEAFQGIYDIFFEQDQKTNGLLVFFPYG 407 (537)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~~~~~~v~~~~~G 407 (537)
.. +.+++|.+...++. ...+.+. ...+++.|+.++.++++++.++.+++.+......+.+.++++++|
T Consensus 315 ~~-~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~G 382 (501)
T 3pop_A 315 PR-GGVMSWLTGTRYMS-QADCGDV----------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYG 382 (501)
T ss_dssp EE-EEEEEHHHHHHHTC-BCSCGGG----------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECC
T ss_pred ce-eEEeCHHHHHhhhc-CCCCCcc----------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecC
Confidence 33 67889998765432 1110110 123567788898878999999999998866322235788999999
Q ss_pred CccccCCCCCCCCcccCCceEEEEEEEEeCCCccchHHHHHHHHHHHHHHhhccccc------CCCCceeccccCCccCC
Q 009342 408 GKISEISESEIPYPHRAGNIYTLLYYAEWGQEAIDDAYQRHVNMLRTLFNYMTPYVA------KNPRTAYINYRDLDIGT 481 (537)
Q Consensus 408 Gav~~v~~~~tAf~~R~~~~~~~~~~~~W~~~~~~~~~~~~~~w~~~~~~~~~~~~~------~~~~gaYvNy~d~~l~~ 481 (537)
|+++++++++|||+||+ ++|++++...|.+++ .++++.+|++++++.+.++.. ..+.|+|+||+|.+++.
T Consensus 383 Gav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~---~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~ 458 (501)
T 3pop_A 383 GEINRRGPSDAAVPQRD-SVVKSSWFSAWQDAE---LDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLD 458 (501)
T ss_dssp GGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGG---GHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGC
T ss_pred cccccCCCCCCCccCcC-ccEEEEEEEEeCCcc---hHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccc
Confidence 99999999999999999 689999999998664 356788999999999876531 12469999999998752
Q ss_pred CCCCCCcchhhhhhhhhhhhcccHHHHHHhHhhcCCCCCCcCCCCCCC
Q 009342 482 NNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPP 529 (537)
Q Consensus 482 ~ep~~~~~~~~~~~~~~~YyG~ny~RL~~IK~kYDP~nvF~~~qsI~p 529 (537)
++ ++++ +..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 459 ~~--~~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 459 PA--RNRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp TT--TCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cc--cccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 11 1122 2349999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=2.3e-71 Score=601.80 Aligned_cols=456 Identities=25% Similarity=0.408 Sum_probs=348.5
Q ss_pred HHHHhhhcCCCCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009342 35 FLKCLSLQSDTISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDH 114 (537)
Q Consensus 35 ~~~~l~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~ 114 (537)
-.+||... .+.|++|+|+.|++++ +..||.||.. .|.+||.|+|++||+++|++|+++++||+||||||++
T Consensus 23 ~~~~l~~~----~~~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~ 93 (523)
T 2wdx_A 23 GERCLPPA----GPVKVTPDDPRYLNLK-LRGANSRFNG----EPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCF 93 (523)
T ss_dssp ---CCCCC----CCEEECTTSTTHHHHH-TCSSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCS
T ss_pred chhhcccC----CCeEECCCCcchHHHH-hhhhhhcccC----CCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCC
Confidence 34898764 5789999999999986 2467888854 8999999999999999999999999999999999999
Q ss_pred CCCCccCCCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHHH-hcCCceeeccCCCCcccchhhhcCCCCCCcc
Q 009342 115 EGLSSISDVPFIIIDLINFSEISVDVEDKTAWVESGATVGQLNYRIAE-KSQNLLAFPVGTCPSVGVGGHFSGGGYGALL 193 (537)
Q Consensus 115 ~g~~~~~~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s 193 (537)
.+.+.... ++++|||++||+|++|+++++|+||+|+++.+|+++|.+ +|+ .+++|+|++||+||+++|||+|+++
T Consensus 94 ~g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl---~~~~G~~~~vgvgG~~~gGg~g~~s 169 (523)
T 2wdx_A 94 EDFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWNV---TIPGGVCGGVGVGGHICGGGYGPLS 169 (523)
T ss_dssp SSSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHSC---CCCCCCCTTCBHHHHHHHTCCCTTH
T ss_pred CCCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcCe---EEccCCCCCCeeCccccCCCCCccc
Confidence 98776532 489999999999999999999999999999999999984 885 5888999999999999999999999
Q ss_pred cccCchhhheeeEEEEccc--Ceeee---ccC-CCCc--hhhhhhhccCCceEEEEEEEEEE-----------EecCC-e
Q 009342 194 RKYGAAADHIVDAHMIDVK--GRFLN---RES-MGED--LFWAIRGGGGASFGIIVSWKINL-----------VAVPS-T 253 (537)
Q Consensus 194 ~~~G~~~d~v~~~~vV~a~--G~~~~---~~~-~~~d--Lf~a~rGgg~g~~GiVt~~~~~~-----------~p~~~-~ 253 (537)
++||+++|+|+++|||++| |+++. +.. +|+| ||||+||||+|+|||||+++||+ +|.|+ .
T Consensus 170 ~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~ 249 (523)
T 2wdx_A 170 RQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPAT 249 (523)
T ss_dssp HHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSE
T ss_pred ccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCccc
Confidence 9999999999999999955 99742 332 5566 99999987768999999999999 99876 4
Q ss_pred EEEEEEeccch----hHHHHHHHHHHHHHHh--hccc----ceeEEEEeec-CC--eEEEEEEEEeeCCHHhHHHhhhhc
Q 009342 254 VTVFAVPRTLE----QNATKLLNKWQYIADR--VHED----LFISPFLFRE-NS--TMVSLFTSLFLGGVDRLLRLMQDS 320 (537)
Q Consensus 254 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~~-~~--~~~~~~~~~~~G~~~~~~~~l~~~ 320 (537)
+..+.+.|+.. +...++++.|+++... .|++ +...+.+... .+ .+.+.+..+|.|+.++..+.++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~~ 329 (523)
T 2wdx_A 250 LLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAH 329 (523)
T ss_dssp EEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHHH
T ss_pred EEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHHH
Confidence 56666767542 3346788889888765 5665 2222223221 12 224556677888877766666553
Q ss_pred cc---c-CC-CccccccccChHHHHHHhcccCcccccchhhccCCCCCCCCceecccCCCCCCCHHHHHHHHHHHHhcCC
Q 009342 321 FP---E-LG-LTKEDCKEMTFVESIVYLDGFEIRESIDMDVLRGRNFPKRPFIGKADYLTEPIPEEAFQGIYDIFFEQDQ 395 (537)
Q Consensus 321 ~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~ 395 (537)
+. + ++ +...++..++|.+....+ .. ...+++.++.++.+.++.+.++.+++.+.....
T Consensus 330 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 392 (523)
T 2wdx_A 330 IEAVIDGVPPAEVPEPIEQRWLASTPGR---------------GG--RGPASKTKAGYLRKRLTDRQIQAVYENMTHMDG 392 (523)
T ss_dssp HHHHHTTCTTCBCCCCEEEETTSSCCCC---------------CS--SCCEEEEEEEEESSCCCHHHHHHHHHHHTCCTT
T ss_pred HHHHHhhcCCCccccceeccHHHHHHhh---------------cC--CCCceeeecccccCCCCHHHHHHHHHHHHhcCC
Confidence 22 1 23 222334455664411100 00 012445567776656888889999988865322
Q ss_pred CceeEEEEEecCCccccCCCCCCCCcccCCceEEEEEEEEeCCCccchHHHHHHHHHHHHHHhhc------ccccCCCCc
Q 009342 396 KTNGLLVFFPYGGKISEISESEIPYPHRAGNIYTLLYYAEWGQEAIDDAYQRHVNMLRTLFNYMT------PYVAKNPRT 469 (537)
Q Consensus 396 ~~~~~v~~~~~GGav~~v~~~~tAf~~R~~~~~~~~~~~~W~~~~~~~~~~~~~~w~~~~~~~~~------~~~~~~~~g 469 (537)
.+.+.+.+..+||++++++.++|||+||+ +++++++...|.+++. ++...+|++++++.+. |+......|
T Consensus 393 ~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~---~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g 468 (523)
T 2wdx_A 393 IDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANPGN---EAKHLTWVRKLYADVYAETGGVPVPNDVSDG 468 (523)
T ss_dssp CSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSGGG---HHHHHHHHHHHHHHHTGGGTTSCCSCSSBCC
T ss_pred CCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCCcc---HHHHHHHHHHHHHHHHhhhcCCCccCCCCCc
Confidence 24567889999999999999999999999 6899999999987643 5677899999998886 331111358
Q ss_pred eeccccCCccCCCCCCCCcchhhhhhhhhhhhcccHHHHHHhHhhcCCCCCCcCCCCCCC
Q 009342 470 AYINYRDLDIGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPP 529 (537)
Q Consensus 470 aYvNy~d~~l~~~ep~~~~~~~~~~~~~~~YyG~ny~RL~~IK~kYDP~nvF~~~qsI~p 529 (537)
+|+||+|.+++. |.+|++. ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 469 ~Y~Ny~d~~~~~--~~~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 469 AYINYPDSDLAD--PGLNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCTTSCCGGGGC--TTTCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ceecCCcccccc--cccccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 999999987641 1112221 139999999999999999999999999999999987
No 7
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=5.8e-70 Score=589.03 Aligned_cols=467 Identities=22% Similarity=0.387 Sum_probs=358.0
Q ss_pred hccchhhHHHHhhhcCCCCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEE
Q 009342 28 AAENHEKFLKCLSLQSDTISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRV 107 (537)
Q Consensus 28 ~~~~~~~~~~~l~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~ 107 (537)
|....+.|+.||... ...++.|+++.|.... .+|+......|.+||.|+|++||+++|++|+++++||+|
T Consensus 2 ~~~~~~~l~~~l~~~----~~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 71 (503)
T 1zr6_A 2 AEAEFNSINACLAAA----DVEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISA 71 (503)
T ss_dssp -CCTTCHHHHHHHHT----TCEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEE
T ss_pred chHHHHHHHHhhCcC----CceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEE
Confidence 345667899999763 2468899999999763 246554556999999999999999999999999999999
Q ss_pred EcCCCCCCCCCccCCCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCC
Q 009342 108 RSGGHDHEGLSSISDVPFIIIDLINFSEISVDVEDKTAWVESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGG 187 (537)
Q Consensus 108 ~ggGh~~~g~~~~~~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~gg 187 (537)
||||||+.+.+.+..+++++|||++|++|++| ++++|+||||+++.+|+++|.+++ |+.++.|.|++||+||+++||
T Consensus 72 ~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~--gl~~~~G~~~~vgvgG~~~gG 148 (503)
T 1zr6_A 72 KGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG--NRALSHGTCPAVGVGGHVLGG 148 (503)
T ss_dssp ESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT--SEECCCCSCTTSBHHHHHHHC
T ss_pred ECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC--CEEeCCCCCCcCchhhhhcCC
Confidence 99999999866542224899999999999999 888999999999999999997776 367899999999999999999
Q ss_pred CCCCcccccCchhhheeeEEEEcccCeeee-ccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccc-hh
Q 009342 188 GYGALLRKYGAAADHIVDAHMIDVKGRFLN-RESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTL-EQ 265 (537)
Q Consensus 188 g~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~-~~ 265 (537)
|+|+++++||+++|+|+++|||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+....+.+.+.+ .+
T Consensus 149 g~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~ 227 (503)
T 1zr6_A 149 GYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRK 227 (503)
T ss_dssp CCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHH
T ss_pred CCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHH
Confidence 999999999999999999999999999997 6678999999999999 69999999999999999866666665544 34
Q ss_pred HHHHHHHHHHHHHHh-hcccceeEEEEeecCCeEEEEEEEEeeCCHHhHHHhhhhccccCCC--ccccccccChHHHHHH
Q 009342 266 NATKLLNKWQYIADR-VHEDLFISPFLFRENSTMVSLFTSLFLGGVDRLLRLMQDSFPELGL--TKEDCKEMTFVESIVY 342 (537)
Q Consensus 266 ~~~~~~~~~~~~~~~-~p~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~~~~~~~~~~ 342 (537)
.+.++++.|+++... +|++++..+.+... .+.+..+|+|+.+++.+.+++++..++. ...++..++|.+....
T Consensus 228 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~ 303 (503)
T 1zr6_A 228 QHVAGLKALQDWAQNTMPRELSMRLEINAN----ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINT 303 (503)
T ss_dssp HHHHHHHHHHHHHHHTCCTTBCCEEEEETT----EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTT
T ss_pred HHHHHHHHHHHHHhhcCChhHEEEEEEeCC----eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHH
Confidence 467889999999876 88888877666532 4566778999999888888765443333 1234456778764432
Q ss_pred hcccCcccccchhhccCCCCCCCCceecccCCCCCCCHHHHHHHHHHHH-hcCCC--ceeEEEEEecCC---ccccCCCC
Q 009342 343 LDGFEIRESIDMDVLRGRNFPKRPFIGKADYLTEPIPEEAFQGIYDIFF-EQDQK--TNGLLVFFPYGG---KISEISES 416 (537)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~-~~~~~--~~~~v~~~~~GG---av~~v~~~ 416 (537)
+... ... ... .....+..++.++.+.++ ++.+.++.+++.+. ..... ..+.+.++++|| ++.+++++
T Consensus 304 ~~~~---~~~--~~~-~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~ 376 (503)
T 1zr6_A 304 YLYG---ADL--NIT-YNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSND 376 (503)
T ss_dssp SCTT---CCS--SCS-SCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTT
T ss_pred HcCC---Ccc--ccc-CCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcc
Confidence 2110 000 000 000112345667777766 88889999999887 43321 234578899999 89999889
Q ss_pred CCCCcccCCceEEEEEEEEe-----CCCccchHHHHHHHHHHHHHHhhcccccCCCCceeccccCCccCCCCCCCCcchh
Q 009342 417 EIPYPHRAGNIYTLLYYAEW-----GQEAIDDAYQRHVNMLRTLFNYMTPYVAKNPRTAYINYRDLDIGTNNKLGHTSVQ 491 (537)
Q Consensus 417 ~tAf~~R~~~~~~~~~~~~W-----~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gaYvNy~d~~l~~~ep~~~~~~~ 491 (537)
+|+|+||+ +++++++...| .++.. .+...+|++++.+.+.........|+|+||+|.+++
T Consensus 377 ~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~----------- 441 (503)
T 1zr6_A 377 ETAYAHRD-QLWLWQFYDSIYDYENNTSPY---PESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT----------- 441 (503)
T ss_dssp TSSCCCTT-CSEEEEEEEEETTTTTCCTTT---TTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----------
T ss_pred cCCccccc-ceeEEEEEeeeccccCCCccc---hHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----------
Confidence 99999998 58888876776 23222 223346666655555433211124799999998642
Q ss_pred hhhhhhhhhhcccHHHHHHhHhhcCCCCCCcCCCCCCCCCCCCC
Q 009342 492 EASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPFNLVKD 535 (537)
Q Consensus 492 ~~~~~~~~YyG~ny~RL~~IK~kYDP~nvF~~~qsI~p~~~~~~ 535 (537)
...|++.|||+||+||++||+||||+|||+++|+|+|..-..+
T Consensus 442 -~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~w~~~ 484 (503)
T 1zr6_A 442 -KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAYLEQ 484 (503)
T ss_dssp -HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCCC---
T ss_pred -cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchhhhhh
Confidence 1269999999999999999999999999999999998765443
No 8
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.1e-69 Score=588.86 Aligned_cols=460 Identities=24% Similarity=0.379 Sum_probs=344.6
Q ss_pred hhhHHHHhhhcCCCCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 009342 32 HEKFLKCLSLQSDTISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGG 111 (537)
Q Consensus 32 ~~~~~~~l~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggG 111 (537)
..+...|++.. ...|++|+|+.|++++ +..||.||.. .|.+||.|+|++||+++|++|+++++||+|||||
T Consensus 18 ~~~~~~~~~~~----~~~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggG 88 (521)
T 2ipi_A 18 EFDGGACGART----ALVKVDRVDRRYQDLV-TRGFNGRFRG----RPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGG 88 (521)
T ss_dssp ---------------CCCEEESSSTTHHHHH-TCCSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred hccccccccCC----CCeEECCCCcchHHHH-hccccccccC----CCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 34566788765 4679999999999986 2467888854 8999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHH-HhcCCceeeccCCCCcccchhhhcCCCCC
Q 009342 112 HDHEGLSSISDVPFIIIDLINFSEISVDVEDKTAWVESGATVGQLNYRIA-EKSQNLLAFPVGTCPSVGVGGHFSGGGYG 190 (537)
Q Consensus 112 h~~~g~~~~~~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~gl~~~~g~~~~vgvgG~~~ggg~g 190 (537)
|++.+.+.... ++++|||++||+|++|+++++|+||+|+++.+|+++|. ++| +.+++|.|++|||||+++|||+|
T Consensus 89 h~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G---l~~~~G~~~~vgvgG~~~gGg~g 164 (521)
T 2ipi_A 89 HCFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG---VTIPAGVCPQVGVGGHVLGGGYG 164 (521)
T ss_dssp CCTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS---BCCCCCSCTTCBHHHHTTTTCCC
T ss_pred cCCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC---ceeCCCCCCCcccCCcccCCCCC
Confidence 99998765332 48999999999999999999999999999999999997 788 45899999999999999999999
Q ss_pred CcccccCchhhheeeEEEEccc--Ceee--e-ccC-CCCc--hhhhhhhccCCceEEEEEEEEEE-----------EecC
Q 009342 191 ALLRKYGAAADHIVDAHMIDVK--GRFL--N-RES-MGED--LFWAIRGGGGASFGIIVSWKINL-----------VAVP 251 (537)
Q Consensus 191 ~~s~~~G~~~d~v~~~~vV~a~--G~~~--~-~~~-~~~d--Lf~a~rGgg~g~~GiVt~~~~~~-----------~p~~ 251 (537)
+++++||+++|+|+++|||++| |+++ . +.. +++| ||||+||||+|+|||||+++||+ +|.|
T Consensus 165 ~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~ 244 (521)
T 2ipi_A 165 PLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKA 244 (521)
T ss_dssp TTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBC
T ss_pred ccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCC
Confidence 9999999999999999999977 9864 2 322 4554 99999997668999999999999 9987
Q ss_pred C-eEEEEEEeccch----hHHHHHHHHHHHHHHh--hccc----ceeEEEEeec-CCeEEEEEEEEeeCCHHhHHHhhhh
Q 009342 252 S-TVTVFAVPRTLE----QNATKLLNKWQYIADR--VHED----LFISPFLFRE-NSTMVSLFTSLFLGGVDRLLRLMQD 319 (537)
Q Consensus 252 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~l~~ 319 (537)
+ .+..+.+.|+.. +.+.++++.|+++... .|++ +...+.+... .+ .+.+...|.|+.++..+.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~l~~ 322 (521)
T 2ipi_A 245 PTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSRAAG--QILLDIQIDGGLDGAEALLND 322 (521)
T ss_dssp CSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECTTSC--EEEEEEEEETTSTTHHHHHHH
T ss_pred CceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccCCCC--ceEEEEEeccCHHHHHHHHHH
Confidence 5 355555555432 2346888889888765 4554 3333333322 12 234455688887776666655
Q ss_pred ccc---c-CC-CccccccccChHHHHHHhcccCcccccchhhccCCCCCCCCceecccCCCCCCCHHHHHHHHHHHHhcC
Q 009342 320 SFP---E-LG-LTKEDCKEMTFVESIVYLDGFEIRESIDMDVLRGRNFPKRPFIGKADYLTEPIPEEAFQGIYDIFFEQD 394 (537)
Q Consensus 320 ~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~ 394 (537)
++. + ++ +...++..++|.+....+... +. . ..+++.++.++.+.++.+.++.+++.+...+
T Consensus 323 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~---------~-~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~ 388 (521)
T 2ipi_A 323 FVAAVNEGTGVEPAVQRSTEPWLRATLANKFD----TG---------G-FDRTKSKGAYLRKPWTAAQAATLYRHLSADS 388 (521)
T ss_dssp HHHHHTTTCSSCCEEEEEEECHHHHHTCCCCC----CT---------T-CCEEEEEEEEESSCCCHHHHHHHHHHHHSCC
T ss_pred HHHHHHhhcCCCccceeeecCHHHHHHhhcCC----CC---------C-CccceeeccccccCCCHHHHHHHHHHHHhCC
Confidence 322 1 23 223345567888754322110 00 0 0234456667665688888999999887643
Q ss_pred CCceeEEEEEecCCccccCCCCCCCCcccCCceEEEEEEEEeCCCccchHHHHHHHHHHHHHHhhccccc------CCCC
Q 009342 395 QKTNGLLVFFPYGGKISEISESEIPYPHRAGNIYTLLYYAEWGQEAIDDAYQRHVNMLRTLFNYMTPYVA------KNPR 468 (537)
Q Consensus 395 ~~~~~~v~~~~~GGav~~v~~~~tAf~~R~~~~~~~~~~~~W~~~~~~~~~~~~~~w~~~~~~~~~~~~~------~~~~ 468 (537)
.+.+.+.++++||++++++.++|||+||+ +++++++...|.+++. ++...+|++++++.+.+... ....
T Consensus 389 -~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~---~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 463 (521)
T 2ipi_A 389 -QVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDPAH---DDANLAWIREIYREIFATTGGVPVPDDRTE 463 (521)
T ss_dssp -SSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGG---HHHHHHHHHHHHHHHTTTTTSSCCSSSSBC
T ss_pred -CCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCCCc---hHHHHHHHHHHHHHHHhhhcCCCcccCCCC
Confidence 24567889999999999999999999999 6899999999987643 56678999999988873211 1135
Q ss_pred ceeccccCCccCCCCCCCCcchhhhhhhhhhhhcccHHHHHHhHhhcCCCCCCcCCCCCCCC
Q 009342 469 TAYINYRDLDIGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPF 530 (537)
Q Consensus 469 gaYvNy~d~~l~~~ep~~~~~~~~~~~~~~~YyG~ny~RL~~IK~kYDP~nvF~~~qsI~p~ 530 (537)
|+|+||+|.+++. |..+++ ...|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 464 g~Y~Ny~d~~~~~--~~~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 464 GTFINYPDVDLVD--ERWNTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp CCCTTSCCGGGGC--TTTSCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ceEeCCCCccccc--cccccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 8999999987541 100111 12399999999999999999999999999999999985
No 9
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.4e-69 Score=588.27 Aligned_cols=451 Identities=25% Similarity=0.410 Sum_probs=344.3
Q ss_pred CceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCeE
Q 009342 47 SEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPFI 126 (537)
Q Consensus 47 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gi 126 (537)
...|++|+|+.|+++++ .||.||. ..|.+||.|+|++||+++|++|+++++||+||||||++.+.+.... +|+
T Consensus 33 ~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~gv 105 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD-VRV 105 (530)
T ss_dssp -CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT-CCE
T ss_pred CceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC-CeE
Confidence 45689999999999864 5677774 4899999999999999999999999999999999999998765432 489
Q ss_pred EEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHHH-hcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhheee
Q 009342 127 IIDLINFSEISVDVEDKTAWVESGATVGQLNYRIAE-KSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVD 205 (537)
Q Consensus 127 vidl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~ 205 (537)
+|||++|++|++|+++++|+||+|+++.+|+++|.+ +|+ .++.|.|++||+||+++|||+|+++++||+++|+|++
T Consensus 106 vIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl---~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~ 182 (530)
T 2y3s_A 106 VMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWGV---TLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHA 182 (530)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHSC---CCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEE
T ss_pred EEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcCe---EEeCCCCCCCCcCCCcCCCCCCcccccccchhhheee
Confidence 999999999999999999999999999999999985 784 5889999999999999999999999999999999999
Q ss_pred EEEEcc--cCeee--e-ccC-CCCc--hhhhhhhccCCceEEEEEEEEEE------------EecCC-eEEEEEEeccch
Q 009342 206 AHMIDV--KGRFL--N-RES-MGED--LFWAIRGGGGASFGIIVSWKINL------------VAVPS-TVTVFAVPRTLE 264 (537)
Q Consensus 206 ~~vV~a--~G~~~--~-~~~-~~~d--Lf~a~rGgg~g~~GiVt~~~~~~------------~p~~~-~~~~~~~~~~~~ 264 (537)
+|||++ +|+++ + +.. +|+| ||||+||||+|+|||||+++||+ +|.|+ .+..+.+.|+..
T Consensus 183 ~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 262 (530)
T 2y3s_A 183 VEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWE 262 (530)
T ss_dssp EEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEEST
T ss_pred EEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEeccc
Confidence 999994 59974 2 333 5555 99999998668999999999999 88875 455555555432
Q ss_pred ----hHHHHHHHHHHHHHHh--hccc----ceeEEEEeec-CCeEEEEEEEEeeCCHHhHHHhhhhccc---c-CC-Ccc
Q 009342 265 ----QNATKLLNKWQYIADR--VHED----LFISPFLFRE-NSTMVSLFTSLFLGGVDRLLRLMQDSFP---E-LG-LTK 328 (537)
Q Consensus 265 ----~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~l~~~~~---~-l~-~~~ 328 (537)
+...++++.|+++... .|++ +...+.+... .+ .+.+...|.|+.+++.+.+++++. + ++ +..
T Consensus 263 ~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~ 340 (530)
T 2y3s_A 263 GLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRSQSG--ALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPH 340 (530)
T ss_dssp TCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECGGGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCE
T ss_pred ccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccCCCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 3346788888888754 4554 2222222221 12 234455688887776666655322 1 23 223
Q ss_pred ccccccChHHHHHHhcccCcccccchhhccCCCCCCCCceecccCCCCCCCHHHHHHHHHHHHhcCC-CceeEEEEEecC
Q 009342 329 EDCKEMTFVESIVYLDGFEIRESIDMDVLRGRNFPKRPFIGKADYLTEPIPEEAFQGIYDIFFEQDQ-KTNGLLVFFPYG 407 (537)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~~~~~~~~~~~-~~~~~v~~~~~G 407 (537)
.++..++|.+....+... +. .. .. .+++.++.++.++++++.++.+++.+..... .+.+.+.++++|
T Consensus 341 ~~~~~~~~~~~~~~~~~~----~~------~~-~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~G 408 (530)
T 2y3s_A 341 SDTRRLPWLHSTRWPGIA----GD------GD-MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYG 408 (530)
T ss_dssp EEEEEEEHHHHTTCHHHH----CC------CC-CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECC
T ss_pred ceeeeccHHHHHHhhcCC----CC------Cc-cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecC
Confidence 445667887743322110 00 00 01 2445667777666888899999998875421 234678899999
Q ss_pred CccccCCCCCCCCcccCCceEEEEEEEEeCCCccchHHHHHHHHHHHHHHhhc------ccccCCCCceeccccCCccCC
Q 009342 408 GKISEISESEIPYPHRAGNIYTLLYYAEWGQEAIDDAYQRHVNMLRTLFNYMT------PYVAKNPRTAYINYRDLDIGT 481 (537)
Q Consensus 408 Gav~~v~~~~tAf~~R~~~~~~~~~~~~W~~~~~~~~~~~~~~w~~~~~~~~~------~~~~~~~~gaYvNy~d~~l~~ 481 (537)
|++++++.++|||+||+ +++++++...|.+++. ++...+|++++++.+. |+......|+|+||+|.+++.
T Consensus 409 Gav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~---~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~ 484 (530)
T 2y3s_A 409 GKVNAVPADRTAVAQRD-SILKIVYVTTWEDPAQ---DPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLAD 484 (530)
T ss_dssp GGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTTC---HHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGC
T ss_pred CccccCCCCcCcccccc-cceeEEEEEecCCCcc---hHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccccc
Confidence 99999999999999999 6899999999987754 5667899999998886 321111358999999987652
Q ss_pred CCCCCCcchhhhhhhhhhhhcccHHHHHHhHhhcCCCCCCcCCCCCCCC
Q 009342 482 NNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPF 530 (537)
Q Consensus 482 ~ep~~~~~~~~~~~~~~~YyG~ny~RL~~IK~kYDP~nvF~~~qsI~p~ 530 (537)
|.+|++. ..|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 485 --~~~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 485 --EEWNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp --TTTCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred --cccccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 1112221 2399999999999999999999999999999999986
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=4.4e-66 Score=553.85 Aligned_cols=437 Identities=23% Similarity=0.325 Sum_probs=336.1
Q ss_pred CCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCe
Q 009342 46 ISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPF 125 (537)
Q Consensus 46 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g 125 (537)
+++.|++|+|+.|+++++ +|+......|.+||.|+|++||+++|++|+++++|+++||||||+.+.+... +|
T Consensus 12 ~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~g 83 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--GG 83 (459)
T ss_dssp CSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--SS
T ss_pred CCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--Ce
Confidence 478999999999998643 4666666799999999999999999999999999999999999999877544 38
Q ss_pred EEEEecCcccEEEeCCCCeEEEcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhheee
Q 009342 126 IIIDLINFSEISVDVEDKTAWVESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVD 205 (537)
Q Consensus 126 ividl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~ 205 (537)
++|||++|++|++|+++++|+||||+++.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+++|+|++
T Consensus 84 vvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G---l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~ 160 (459)
T 2bvf_A 84 IVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG---LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILG 160 (459)
T ss_dssp EEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT---EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEE
T ss_pred EEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC---CEecCCCCCCcccceeecCCCCccccccccCHhHhEEE
Confidence 999999999999999999999999999999999999988 57889999999999999999999999999999999999
Q ss_pred EEEEcccCeeee-ccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccchhHHH--HHHHHHHHHHHhhc
Q 009342 206 AHMIDVKGRFLN-RESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLEQNAT--KLLNKWQYIADRVH 282 (537)
Q Consensus 206 ~~vV~a~G~~~~-~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p 282 (537)
+|||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+.+....+.|+..+ .. ++++.|+++....|
T Consensus 161 ~~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 238 (459)
T 2bvf_A 161 ATLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEMA 238 (459)
T ss_dssp EEEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhCc
Confidence 999999999997 6677899999999998 8999999999999999765655555565432 34 78889999887778
Q ss_pred ccceeEEEEee-cCCeEEEEEEEEeeCCHHhHHHhhhhccccCC-CccccccccChHHHHHHhcccCcccccchhhccCC
Q 009342 283 EDLFISPFLFR-ENSTMVSLFTSLFLGGVDRLLRLMQDSFPELG-LTKEDCKEMTFVESIVYLDGFEIRESIDMDVLRGR 360 (537)
Q Consensus 283 ~~l~~~~~~~~-~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (537)
+++...+.... ..+...+.+...|.|+.+++.+.++++ .+++ +....+..++|.+........ ...+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------- 308 (459)
T 2bvf_A 239 DHIYPSVFVGVDENRAPSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEV-GSFED-------- 308 (459)
T ss_dssp TTCCCEEEEEECTTCCEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHH-SCCCC--------
T ss_pred HhhccccccCcccCCCceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccccc-ccCCC--------
Confidence 87744332211 123345566778999988777777653 3443 233445667887744321100 00000
Q ss_pred CCCCCCcee-cccCCCCCCCHHHHHHHHHHHHhcCCCc-eeEEEEEecCCccccCCCCCCCCcccCCceEEEEEEEEeCC
Q 009342 361 NFPKRPFIG-KADYLTEPIPEEAFQGIYDIFFEQDQKT-NGLLVFFPYGGKISEISESEIPYPHRAGNIYTLLYYAEWGQ 438 (537)
Q Consensus 361 ~~~~~~~~~-~s~~~~~~l~~~~i~~~~~~~~~~~~~~-~~~v~~~~~GGav~~v~~~~tAf~~R~~~~~~~~~~~~W~~ 438 (537)
. ...+.. ++.++.+.++.+.++.+++.+.+.+..+ .+.+++. ||++.+ .+.|||+||+ ..+ +.+...|.+
T Consensus 309 -~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--gg~~~~--~~~ta~~~R~-~~~-~~~~~~w~~ 380 (459)
T 2bvf_A 309 -G-MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIE--GMPFGN--PKRTPARHRD-AMG-VLALAEWSG 380 (459)
T ss_dssp -S-CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEE--CCCCCC--TTCCSSCCCS-SCE-EEEEEEECT
T ss_pred -C-CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEe--CCccCC--CCCCCcccCC-cce-EEEEEEeCC
Confidence 1 112222 4556543344556666665554433112 2333433 887776 5679999999 477 888899987
Q ss_pred CccchHHHHHHHHHHHHHHhhcccccCCCCceeccccCCccCCCCCCCCcchhhhhhhhhhhhccc-HHHHHHhHhhcCC
Q 009342 439 EAIDDAYQRHVNMLRTLFNYMTPYVAKNPRTAYINYRDLDIGTNNKLGHTSVQEASVWGKKYFKNN-FYRLVHVKTMVDP 517 (537)
Q Consensus 439 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gaYvNy~d~~l~~~ep~~~~~~~~~~~~~~~YyG~n-y~RL~~IK~kYDP 517 (537)
+++ .++...+|++++++.+.++......|+|+||+|.+. ..|++.|||+| |+||++||+||||
T Consensus 381 ~~~--~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~--------------~~~~~~~yG~~n~~rL~~iK~kyDP 444 (459)
T 2bvf_A 381 AAP--GSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT--------------AEMVAEVYKPEVYSRLAAVKREYDP 444 (459)
T ss_dssp TST--TTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC--------------HHHHHHHHCHHHHHHHHHHHHHHCT
T ss_pred Ccc--chHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc--------------hHHHHHHhCcchHHHHHHHHHHhCc
Confidence 651 134467999999999998842112489999998751 26999999987 9999999999999
Q ss_pred CCCCcCCCCCCC
Q 009342 518 ENFFRNEQSIPP 529 (537)
Q Consensus 518 ~nvF~~~qsI~p 529 (537)
+|+|+++|+|+|
T Consensus 445 ~~vF~~~~~I~p 456 (459)
T 2bvf_A 445 ENRFRHNYNIDP 456 (459)
T ss_dssp TCCCCSSSCCCC
T ss_pred ccccCCCCCCCC
Confidence 999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=4.8e-42 Score=374.04 Aligned_cols=219 Identities=16% Similarity=0.247 Sum_probs=175.3
Q ss_pred cchhhHHHHhhhcCCCCCceEEcCCCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHh--C-CCeEE
Q 009342 30 ENHEKFLKCLSLQSDTISEVLYTQNNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKK--N-GLQIR 106 (537)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~--~-~~~~~ 106 (537)
...+.|..||.... +.+.|.+ +...+.. +...|+......|.+||+|+|++||+++|++|++ + ++|++
T Consensus 29 ~~~~~~~~~l~~~~--~~~~v~~-~~~~~~~------~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~ 99 (534)
T 1w1o_A 29 DRGRPWPASLAALA--LDGKLRT-DSNATAA------ASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIA 99 (534)
T ss_dssp -----------CTT--TTTCEEC-SHHHHHH------TSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEE
T ss_pred cchHHHHHHHHhcC--CCceEec-CHHHHHH------HhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEE
Confidence 45668888987733 2566665 2223332 2334666566789999999999999999999998 6 99999
Q ss_pred EEcCCCCCCCCCccCCCCeEEEEecCccc------EEEeCCCCeEEEcCCCCHHHHHHHHHHhcCCceeecc-CCCCccc
Q 009342 107 VRSGGHDHEGLSSISDVPFIIIDLINFSE------ISVDVEDKTAWVESGATVGQLNYRIAEKSQNLLAFPV-GTCPSVG 179 (537)
Q Consensus 107 ~~ggGh~~~g~~~~~~~~gividl~~l~~------i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~-g~~~~vg 179 (537)
+||||||+.|.+.+.+ |++|||++||+ +++|+++.+++||||+++.+|++++.++|+ ..+. +.+.+++
T Consensus 100 ~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl---~~~~~~~~~~~t 174 (534)
T 1w1o_A 100 FRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGV---APRSWTDYLYLT 174 (534)
T ss_dssp EESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTE---EESCCCSSCCSB
T ss_pred EECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCC---cccCCCCCCCEE
Confidence 9999999998877654 89999999998 488888899999999999999999999984 3333 3346788
Q ss_pred chhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee-ccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEE
Q 009342 180 VGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN-RESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFA 258 (537)
Q Consensus 180 vgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~ 258 (537)
|||++.++|+|.++++||+++|+|+++|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+....+.
T Consensus 175 vGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~ 253 (534)
T 1w1o_A 175 VGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVR 253 (534)
T ss_dssp HHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEE
T ss_pred eceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEE
Confidence 99999999999999999999999999999999999997 6668899999999998 799999999999999998766666
Q ss_pred Eeccc
Q 009342 259 VPRTL 263 (537)
Q Consensus 259 ~~~~~ 263 (537)
+.|..
T Consensus 254 ~~~~~ 258 (534)
T 1w1o_A 254 FVYTD 258 (534)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 66654
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=8.2e-35 Score=315.62 Aligned_cols=199 Identities=23% Similarity=0.322 Sum_probs=166.7
Q ss_pred cccCCCCCCCccEEEecCCHHHHHHHHHHHHh-CCCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccEEEeC-----CC
Q 009342 69 LIFSTPANPKPLFIITPFHVSEIQAAVKCSKK-NGLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEISVDV-----ED 142 (537)
Q Consensus 69 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~-~~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i~~d~-----~~ 142 (537)
..|+......|.+||+|+|++||+++|++|++ +++||++||||||+.|.+...+ |++|||++||+|++|. ++
T Consensus 52 ~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~ 129 (524)
T 2exr_A 52 RDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGD 129 (524)
T ss_dssp CCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSS
T ss_pred ccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCC
Confidence 34665556789999999999999999999996 9999999999999998776554 8999999999987776 55
Q ss_pred --CeEEEcCCCCHHHHHHHHH-HhcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee-c
Q 009342 143 --KTAWVESGATVGQLNYRIA-EKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN-R 218 (537)
Q Consensus 143 --~~v~v~~G~~~~~l~~~l~-~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-~ 218 (537)
.+++||||+++.++++++. ++|+. ....+.++.++|||++.++|.|..+.+||.++|+|++++||++||++++ +
T Consensus 130 ~~~~v~v~aGv~~~~l~~~~l~~~Gl~--~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~ 207 (524)
T 2exr_A 130 ATAFVDVSGGALWEDVLKRCVSEYGLA--PRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCS 207 (524)
T ss_dssp SSEEEEEETTCBHHHHHHHHHHHHSEE--CSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEE
T ss_pred CceEEEEeCCcCHHHHHHHHHHHcCCC--CCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEEC
Confidence 7999999999999866554 88842 1122344578899999999999999999999999999999999999997 5
Q ss_pred cCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccchhHHHHHHH
Q 009342 219 ESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLEQNATKLLN 272 (537)
Q Consensus 219 ~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 272 (537)
..+|+||||++||+. |+|||||+++||++|.|+...++.+.|...+++.+.+.
T Consensus 208 ~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~ 260 (524)
T 2exr_A 208 EIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAE 260 (524)
T ss_dssp SSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHH
T ss_pred CCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHH
Confidence 557899999999998 89999999999999999876666666654443333333
No 13
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.2e-32 Score=294.98 Aligned_cols=179 Identities=20% Similarity=0.276 Sum_probs=160.0
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhC--CCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccE-EEeCCCCeEE
Q 009342 70 IFSTPANPKPLFIITPFHVSEIQAAVKCSKKN--GLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEI-SVDVEDKTAW 146 (537)
Q Consensus 70 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~--~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i-~~d~~~~~v~ 146 (537)
.|.. ....|.+|+.|+|++||+++|++|+++ ++|+.++|+|||+.+.+... +|++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 5754 477999999999999999999999999 79999999999997765533 3899999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee-ccC-CCCc
Q 009342 147 VESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN-RES-MGED 224 (537)
Q Consensus 147 v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~-~~~d 224 (537)
||||+++.+|+++|.++|+. +...+|+ +.++|||.+.+|+||..++.||..+|+|++++||++||++++ +.. +|+|
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~-l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~d 189 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLW-VPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAE 189 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEE-CSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHH
T ss_pred EcCCccHHHHHHHHHHcCCE-EEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChH
Confidence 99999999999999999964 3333444 467899999999999999999999999999999999999997 555 7999
Q ss_pred hhhhhhhccCCceEEEEEEEEEEEecCCeE
Q 009342 225 LFWAIRGGGGASFGIIVSWKINLVAVPSTV 254 (537)
Q Consensus 225 Lf~a~rGgg~g~~GiVt~~~~~~~p~~~~~ 254 (537)
||||+|||+ |+|||||+++||++|.++..
T Consensus 190 Lf~a~rgs~-G~~GIIt~~tl~l~p~~~~~ 218 (481)
T 4feh_A 190 LFWATVGGN-GLTGIIMRATIEMTPTSTAY 218 (481)
T ss_dssp HHHHHTTCT-TTTCEEEEEEEECEECSCSE
T ss_pred HHHHhhccC-CCceEEEEEEEEEEeCCccE
Confidence 999999998 89999999999999988643
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=2.8e-33 Score=311.33 Aligned_cols=202 Identities=21% Similarity=0.210 Sum_probs=174.4
Q ss_pred cCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccC---CCCeEEEEecCcccE-EEeCCCCeEE
Q 009342 71 FSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSIS---DVPFIIIDLINFSEI-SVDVEDKTAW 146 (537)
Q Consensus 71 ~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~---~~~gividl~~l~~i-~~d~~~~~v~ 146 (537)
|+......|.+||+|+|++||+++|++|+++++||++||||||+.|.+.+. ..++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 445556699999999999999999999999999999999999988655432 125899999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee-----ccCC
Q 009342 147 VESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN-----RESM 221 (537)
Q Consensus 147 v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-----~~~~ 221 (537)
|||||++.+|.++|.++|+. +.+.+++....+|||+++++++|+.+.+||.+.|+|+++||||+||++++ ....
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~-lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~a 356 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYC-TGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMST 356 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEE-CCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCS
T ss_pred EecCchHHHHHHHHHHcCCc-cCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCC
Confidence 99999999999999999965 45556777888999999999999999999999999999999999999985 2345
Q ss_pred CCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccchhHHHHHHHHH
Q 009342 222 GEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLEQNATKLLNKW 274 (537)
Q Consensus 222 ~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (537)
++||+|+++|+. |+|||||+++||++|.|+....+.+.|+..+++.+++..+
T Consensus 357 GyDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 357 GPDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SSCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred CcCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 689999999999 8999999999999999997766666676544444544443
No 15
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.2e-33 Score=297.52 Aligned_cols=205 Identities=22% Similarity=0.285 Sum_probs=176.0
Q ss_pred cccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccE-EEeCCCCeEEE
Q 009342 69 LIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEI-SVDVEDKTAWV 147 (537)
Q Consensus 69 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i-~~d~~~~~v~v 147 (537)
..|+......|.+||+|+|++||+++|++|+++++|+++||||||+.|.+.... ++++|||++||+| ++|+++.+++|
T Consensus 42 ~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V 120 (476)
T 3pm9_A 42 TEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITV 120 (476)
T ss_dssp BCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEE
Confidence 357655567899999999999999999999999999999999999998877643 4899999999998 89999999999
Q ss_pred cCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee-c-----cCC
Q 009342 148 ESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN-R-----ESM 221 (537)
Q Consensus 148 ~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-~-----~~~ 221 (537)
|||+++.+|+++|.++|+. +.+..+++..++|||++.++++|..+.+||.++|+|+++|||++||++++ . ...
T Consensus 121 ~aGv~~~~l~~~l~~~Gl~-~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~ 199 (476)
T 3pm9_A 121 EAGAILQRVQEKAAEVDRL-FPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNT 199 (476)
T ss_dssp ETTCBHHHHHHHHHHTTEE-CCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCS
T ss_pred CCCcCHHHHHHHHHHhCCc-cCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCC
Confidence 9999999999999999954 23334666788999999999999999999999999999999999999995 1 234
Q ss_pred CCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccchhHHHHHHHHHHH
Q 009342 222 GEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLEQNATKLLNKWQY 276 (537)
Q Consensus 222 ~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (537)
++||+|+++|++ |+|||||+++||++|.|+......+.|+..+++.+++..+++
T Consensus 200 g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 200 GYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp SCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 689999999998 899999999999999998766666666654555555655544
No 16
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=2.5e-31 Score=281.63 Aligned_cols=173 Identities=16% Similarity=0.277 Sum_probs=154.8
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccE-EEeCCCCeEEEc
Q 009342 70 IFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEI-SVDVEDKTAWVE 148 (537)
Q Consensus 70 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i-~~d~~~~~v~v~ 148 (537)
.|+......|.+|+.|+|++||+++|++| +|+.++|||||+.+.+... .+|++|||++|++| ++|+++++|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~-~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG-DGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC-TTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC-CCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 47776777999999999999999999998 8999999999998877632 24899999999997 999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCceeec-cCCCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee-ccCCCCchh
Q 009342 149 SGATVGQLNYRIAEKSQNLLAFP-VGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN-RESMGEDLF 226 (537)
Q Consensus 149 ~G~~~~~l~~~l~~~g~~gl~~~-~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLf 226 (537)
||+++.+|.++|.++|+. ++ .+.++.++|||.+.+|+||.. .+||..+|+|++++||++||++++ +..+|+ |
T Consensus 87 aG~~l~~l~~~l~~~Gl~---l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f 160 (422)
T 2vfr_A 87 GGVRYAELARVVHARGLA---LPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--F 160 (422)
T ss_dssp TTCBHHHHHHHHHHTTEE---CSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--G
T ss_pred CCCCHHHHHHHHHHcCCc---ccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--c
Confidence 999999999999999954 54 377788999999999999976 699999999999999999999997 555565 9
Q ss_pred hhhhhccCCceEEEEEEEEEEEecCCeE
Q 009342 227 WAIRGGGGASFGIIVSWKINLVAVPSTV 254 (537)
Q Consensus 227 ~a~rGgg~g~~GiVt~~~~~~~p~~~~~ 254 (537)
|+++|+. |++||||+++||++|.++..
T Consensus 161 ~~~~g~~-G~lGvit~~~l~l~p~~~~~ 187 (422)
T 2vfr_A 161 GGAVTSL-GALGVVTSLTLDLEPAYEME 187 (422)
T ss_dssp GGTSSCT-TTTCEEEEEEEECEECCEEE
T ss_pred ceEEecC-CCCEEEEEEEEEEEecCceE
Confidence 9999998 89999999999999998744
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=9.2e-32 Score=294.19 Aligned_cols=195 Identities=21% Similarity=0.264 Sum_probs=165.7
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCC--CCeEEEEecCcccE-EEeCCCCeEEEcCCCC
Q 009342 76 NPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISD--VPFIIIDLINFSEI-SVDVEDKTAWVESGAT 152 (537)
Q Consensus 76 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~--~~gividl~~l~~i-~~d~~~~~v~v~~G~~ 152 (537)
...|.+||+|+|++||+++|++|+++++||+++|||||+.|.+.... +++++|||++||+| ++|+++.+++||||++
T Consensus 135 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~ 214 (584)
T 2uuu_A 135 KNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIM 214 (584)
T ss_dssp CCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred CCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCc
Confidence 45899999999999999999999999999999999999987665431 25899999999998 8999999999999999
Q ss_pred HHHHHHHHHHhcCCceeeccCC--CCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee----ccCCCCchh
Q 009342 153 VGQLNYRIAEKSQNLLAFPVGT--CPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN----RESMGEDLF 226 (537)
Q Consensus 153 ~~~l~~~l~~~g~~gl~~~~g~--~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~----~~~~~~dLf 226 (537)
+.+|+++|.++|+. +++.. ...++|||++.++++|+.+.+||.++|+|+++|||++||++++ +...++||+
T Consensus 215 ~~~l~~~l~~~Gl~---~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~ 291 (584)
T 2uuu_A 215 GPELEKQLHKQGVS---LGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYK 291 (584)
T ss_dssp HHHHHHHHHHTTEE---CCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTH
T ss_pred HHHHHHHHHHcCCe---eCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchh
Confidence 99999999999954 44333 3457899999999999999999999999999999999999886 344689999
Q ss_pred hhhhhccCCceEEEEEEEEEEEecCCeEEEEEEeccchhHHHHHHHHH
Q 009342 227 WAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVPRTLEQNATKLLNKW 274 (537)
Q Consensus 227 ~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (537)
|+++|++ |+|||||+++||++|.|+....+.+.|+..+++.+++..+
T Consensus 292 ~~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 338 (584)
T 2uuu_A 292 HIILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQI 338 (584)
T ss_dssp HHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred hhhccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHH
Confidence 9999998 8999999999999999987666666665444444444444
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=4.8e-31 Score=286.39 Aligned_cols=198 Identities=22% Similarity=0.278 Sum_probs=166.0
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCC-CCCccCCCCeEEEEecCcccE-EEeCCCCeEEEcCCCCH
Q 009342 76 NPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHE-GLSSISDVPFIIIDLINFSEI-SVDVEDKTAWVESGATV 153 (537)
Q Consensus 76 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~~~~~~~~gividl~~l~~i-~~d~~~~~v~v~~G~~~ 153 (537)
...|.+||+|+|++||+++|++|+++++|++++|+|||+. |.+.....+|++|||++||+| ++|+++++++||||+++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4579999999999999999999999999999999999986 654431124899999999999 99999999999999999
Q ss_pred HHHHHHHHHhcCCceeeccC---CCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee-c--cCCCCchhh
Q 009342 154 GQLNYRIAEKSQNLLAFPVG---TCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN-R--ESMGEDLFW 227 (537)
Q Consensus 154 ~~l~~~l~~~g~~gl~~~~g---~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-~--~~~~~dLf~ 227 (537)
.+|+++|.++|+. ++++ ....+||||+++++|.|.. +||..+|+|+++|||++||++++ . ..+|+|+|+
T Consensus 134 ~~l~~~l~~~Gl~---~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~ 208 (520)
T 1wvf_A 134 GQMYDYIQENNLP---VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQ 208 (520)
T ss_dssp HHHHHHHHHTTCS---EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTT
T ss_pred HHHHHHHHHcCCc---ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHh
Confidence 9999999999965 5544 2336889999999998886 99999999999999999999996 2 246889988
Q ss_pred hhhhccC---------CceEEEEEEEEEEEecCCeEEEEEEeccchhHHHHHHHHHHHHH
Q 009342 228 AIRGGGG---------ASFGIIVSWKINLVAVPSTVTVFAVPRTLEQNATKLLNKWQYIA 278 (537)
Q Consensus 228 a~rGgg~---------g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (537)
+.|||.| ++|||||+++||++|.|+....+.+.|+..+++.++++.++.+.
T Consensus 209 ~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 209 IFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 7777752 59999999999999999876666677765455555566666554
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=1.1e-29 Score=277.47 Aligned_cols=198 Identities=12% Similarity=0.125 Sum_probs=165.5
Q ss_pred CceEEcC-CCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCC---
Q 009342 47 SEVLYTQ-NNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISD--- 122 (537)
Q Consensus 47 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~--- 122 (537)
++.+++| +++.|++. ...|+......|.+|+.|+|++||+++|++|+++++|++++|||||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~------~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQA------YQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEE------EECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHH------HhhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 5678888 99999964 2358776677899999999999999999999999999999999999876443221
Q ss_pred CCeEEEEe-cCcccEEEeC--CCCeEEEcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCc-------
Q 009342 123 VPFIIIDL-INFSEISVDV--EDKTAWVESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGAL------- 192 (537)
Q Consensus 123 ~~gividl-~~l~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~------- 192 (537)
.+|++||| ++||+|++|+ +.++|+||||+++.+|.++|.++|+. +...++. +.++|||.+.+|+||..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~-l~~~~~~-~~~TvGG~i~~~~~G~~l~~gG~~ 160 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLG-WANLPAP-GVLSIGGALAVNAHGAALPAVGQT 160 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEE-CSSCCSC-TTCBHHHHHHTTCCCSCCCCTTCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCc-ccccCCC-CCcccCCCcccCCcccccccCCcc
Confidence 14899999 8999999998 78899999999999999999999964 3333333 56789999988777765
Q ss_pred ---ccccCchhhheeeEEEEcccCe---eeeccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEE
Q 009342 193 ---LRKYGAAADHIVDAHMIDVKGR---FLNRESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVT 255 (537)
Q Consensus 193 ---s~~~G~~~d~v~~~~vV~a~G~---~~~~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~ 255 (537)
+++||..+|+|+++|||++||+ +++...+++||+|+++|.| . ||||++|||++|.++...
T Consensus 161 ~~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G-~--giIt~~tl~l~p~~~~~~ 226 (561)
T 2i0k_A 161 TLPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG-R--CFLTSVTMQAGPNFRQRC 226 (561)
T ss_dssp CCTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT-S--SCEEEEEEECEECCEEEE
T ss_pred cccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC-C--EEEEEEEEEEEECCceEE
Confidence 6789999999999999999999 6653334899999999665 3 899999999999987443
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=3.5e-28 Score=265.79 Aligned_cols=201 Identities=17% Similarity=0.182 Sum_probs=162.6
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCC-CCCccCCCCeEEEEe-cCcccE-EEeCCCCeEEEcCCCC
Q 009342 76 NPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHE-GLSSISDVPFIIIDL-INFSEI-SVDVEDKTAWVESGAT 152 (537)
Q Consensus 76 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~~~~~~~~gividl-~~l~~i-~~d~~~~~v~v~~G~~ 152 (537)
...|.+||.|+|++||+++|++|+++++||++||+||++. |.+.....+|++||| ++||+| ++|+++++++||||++
T Consensus 68 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~ 147 (560)
T 1e8g_A 68 YFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVT 147 (560)
T ss_dssp SSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCB
T ss_pred ccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCC
Confidence 4579999999999999999999999999999999999986 544431114899999 999999 9999999999999999
Q ss_pred HHHHHHHHHHhcCC-ceeeccCCCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeee-cc--CCCC-----
Q 009342 153 VGQLNYRIAEKSQN-LLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLN-RE--SMGE----- 223 (537)
Q Consensus 153 ~~~l~~~l~~~g~~-gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~--~~~~----- 223 (537)
+.+|.++|.++|+. ++.+.+++.+..|+||.+.++|.|.. +||..+|+|+++|||++||++++ .. ..++
T Consensus 148 ~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~ 225 (560)
T 1e8g_A 148 YHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPET 225 (560)
T ss_dssp HHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGG
T ss_pred HHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCccccccc
Confidence 99999999999954 12222344446779999999988865 99999999999999999999996 32 2231
Q ss_pred ----------chhhhhhhcc----------CCceEEEEEEEEEEEecCCeEEEEEEeccchhHHHHHHHHHHHHH
Q 009342 224 ----------DLFWAIRGGG----------GASFGIIVSWKINLVAVPSTVTVFAVPRTLEQNATKLLNKWQYIA 278 (537)
Q Consensus 224 ----------dLf~a~rGgg----------~g~~GiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (537)
+++|+++++| +|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 226 ~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 226 MGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp TTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6677776542 379999999999999999877667777765555566666666654
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=7.8e-29 Score=265.56 Aligned_cols=188 Identities=13% Similarity=0.189 Sum_probs=153.7
Q ss_pred CCcCcHHHHHhcccccccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccC---CCCeEEEEe
Q 009342 54 NNASYSSVLKASIQNLIFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSIS---DVPFIIIDL 130 (537)
Q Consensus 54 ~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~---~~~gividl 130 (537)
+.+.|.+.. ..|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+..... ..+|++|||
T Consensus 11 ~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 345665432 24888777899999999999999999999999999999999999986322111 124899999
Q ss_pred c-CcccEEEeCC--CCeEEEcCCCCHHHHHHHHHHhcCCceeecc-CCCCcccchhhhcCCCCCCc----------cccc
Q 009342 131 I-NFSEISVDVE--DKTAWVESGATVGQLNYRIAEKSQNLLAFPV-GTCPSVGVGGHFSGGGYGAL----------LRKY 196 (537)
Q Consensus 131 ~-~l~~i~~d~~--~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~-g~~~~vgvgG~~~ggg~g~~----------s~~~ 196 (537)
+ +||+|++|++ .++|+||||+++.+|+++|.++|+ .++. +.++.++|||++.+|++|.. +++|
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL---~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~ 161 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGL---GVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASY 161 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTTE---ECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCS
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcCC---EEEecCCCCCeEEcccccCCCCccccccccccccccccc
Confidence 5 7999999975 579999999999999999999985 4552 33466899999999999886 6899
Q ss_pred CchhhheeeEEEEcccCe-----eeeccCCCCchhhhhhhccCCceEEEEEEEEEEEecCCe
Q 009342 197 GAAADHIVDAHMIDVKGR-----FLNRESMGEDLFWAIRGGGGASFGIIVSWKINLVAVPST 253 (537)
Q Consensus 197 G~~~d~v~~~~vV~a~G~-----~~~~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~ 253 (537)
|+++|+|++++||++||+ +++...+++||| ++|+|. |+ ||||+++||++|.+..
T Consensus 162 G~~~D~V~~levV~adG~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l 220 (540)
T 3js8_A 162 GSISNLVLSLTAVVYDKASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRL 220 (540)
T ss_dssp SCGGGGEEEEEEEEEETTTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEE
T ss_pred ccHHHhEEEEEEEcCCCCCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCce
Confidence 999999999999999998 666334689985 555555 45 6999999999999864
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=1.8e-28 Score=266.60 Aligned_cols=194 Identities=12% Similarity=0.151 Sum_probs=162.4
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCC----CeEEEEecCcccE-EEeCCCCeEEEcCC
Q 009342 76 NPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDV----PFIIIDLINFSEI-SVDVEDKTAWVESG 150 (537)
Q Consensus 76 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~----~gividl~~l~~i-~~d~~~~~v~v~~G 150 (537)
...|.+||+|+|++||+++|++|+++++||+++|||||+.|.+...++ ++++|||++||+| ++|+ +++|+||||
T Consensus 43 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aG 121 (571)
T 1f0x_A 43 QGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPG 121 (571)
T ss_dssp BBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTT
T ss_pred CCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCC
Confidence 468999999999999999999999999999999999999987766531 3899999999999 7984 579999999
Q ss_pred CCHHHHHHHHHHhcCCceeecc---CCCCcccchhhhcCCCCCCcccccCchhh----------------heeeEEEEcc
Q 009342 151 ATVGQLNYRIAEKSQNLLAFPV---GTCPSVGVGGHFSGGGYGALLRKYGAAAD----------------HIVDAHMIDV 211 (537)
Q Consensus 151 ~~~~~l~~~l~~~g~~gl~~~~---g~~~~vgvgG~~~ggg~g~~s~~~G~~~d----------------~v~~~~vV~a 211 (537)
+++.+|.++|.++|+ .++. ++|...+|||.+.++++|..+.+||..+| +|++++||++
T Consensus 122 v~l~~L~~~l~~~Gl---~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 122 TTLYSLEKALKPLGR---EPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp CBHHHHHHHHGGGTE---ECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred cCHHHHHHHHHhcCc---cCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 999999999999985 3432 34455689999999999999999999999 9999999999
Q ss_pred cCeeee-cc---------------CCC--C-----------------chhhhh--hhccCCceEEEEEEEEEEEecCCeE
Q 009342 212 KGRFLN-RE---------------SMG--E-----------------DLFWAI--RGGGGASFGIIVSWKINLVAVPSTV 254 (537)
Q Consensus 212 ~G~~~~-~~---------------~~~--~-----------------dLf~a~--rGgg~g~~GiVt~~~~~~~p~~~~~ 254 (537)
||++++ .. .++ + ||+|++ +|+. |+||| |+++||++|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeE
Confidence 999995 21 223 2 988888 9998 89999 99999999999876
Q ss_pred EEEEEeccchhHHHHHHHHHH
Q 009342 255 TVFAVPRTLEQNATKLLNKWQ 275 (537)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~ 275 (537)
..+.+.++..+++.+++..+.
T Consensus 277 ~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 277 QVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHH
Confidence 666666655444455555444
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.94 E-value=1.6e-26 Score=234.53 Aligned_cols=165 Identities=19% Similarity=0.187 Sum_probs=140.3
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHH
Q 009342 76 NPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEISVDVEDKTAWVESGATVGQ 155 (537)
Q Consensus 76 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~ 155 (537)
...|.++|.|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ |++|||++|++|++| +.+++||||++|.+
T Consensus 52 gg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~--gvvI~l~~~~~I~~d--~~~v~v~aG~~~~~ 127 (322)
T 3tx1_A 52 GGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR--GVILHLDLLQTIERN--NTQIVAMSGAKLID 127 (322)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC--eEEEECCCCCcEEEC--CCEEEEecCcCHHH
Confidence 45899999999999999999999999999999999999876543333 899999999999886 35999999999999
Q ss_pred HHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCeeeeccCCCCchhhhhhhccCC
Q 009342 156 LNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRFLNRESMGEDLFWAIRGGGGA 235 (537)
Q Consensus 156 l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~~~~~~~~~dLf~a~rGgg~g 235 (537)
|++++.++|+.|+.+..|.+++||.+..+.+||+| |.++|+|++++||++||++++.. ++|++|++|++..+
T Consensus 128 l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s~~g 199 (322)
T 3tx1_A 128 TAKFALNESLSGLEFACGIPGSIGGALHMNAGAYG------GEISDVLEAATVLTQTGELKKLK--RSELKAAYRFSTIA 199 (322)
T ss_dssp HHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-CTTT
T ss_pred HHHHHHHcCCcccccCCCCcchhHHHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhcccC
Confidence 99999999988888999999887655555566655 79999999999999999999732 36999999998644
Q ss_pred -ceEEEEEEEEEEEecCC
Q 009342 236 -SFGIIVSWKINLVAVPS 252 (537)
Q Consensus 236 -~~GiVt~~~~~~~p~~~ 252 (537)
++||||+++||++|.|+
T Consensus 200 ~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 200 EKNYIVLDATFSLALEEK 217 (322)
T ss_dssp GGGCEEEEEEEECEECCH
T ss_pred CCCEEEEEEEEEEEeCCH
Confidence 67999999999999874
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=4.7e-25 Score=225.97 Aligned_cols=164 Identities=10% Similarity=-0.003 Sum_probs=144.3
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccEEEeC--CCCeEEEcCCCCH
Q 009342 76 NPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEISVDV--EDKTAWVESGATV 153 (537)
Q Consensus 76 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i~~d~--~~~~v~v~~G~~~ 153 (537)
...|.++|.|+|++||+++|++|+++++|+.++|+|||..+.+. .+ |+||+++ |++|+++. ++.+++||||+.|
T Consensus 28 gg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~~ 103 (357)
T 3i99_A 28 EQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGEDW 103 (357)
T ss_dssp SCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCCcH
Confidence 34788999999999999999999999999999999999876554 43 8999999 99998864 4568999999999
Q ss_pred HHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccCc-hhhheeeEEEEcc-cCeeeeccCCCCchhhhhhh
Q 009342 154 GQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGA-AADHIVDAHMIDV-KGRFLNRESMGEDLFWAIRG 231 (537)
Q Consensus 154 ~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~-~~d~v~~~~vV~a-~G~~~~~~~~~~dLf~a~rG 231 (537)
.+|.+++.++|+.|+.+..|.++|| ||+.+++++.||. ++|+|++++||++ +|++++.. +.|++|++|+
T Consensus 104 ~~l~~~a~~~Gl~GlE~l~gIPGtV-------GGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~ 174 (357)
T 3i99_A 104 PSLVSWCVEQGIGGLENLALIPGCA-------GSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRD 174 (357)
T ss_dssp HHHHHHHHHTTCTTCGGGTTCCSBG-------GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTB
T ss_pred HHHHHHHHHcCCcCccccCCCCchh-------HHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccccc
Confidence 9999999999998888888888765 6788888899997 8999999999999 99999733 3699999999
Q ss_pred ccC----CceEEEEEEEEEEEecCC
Q 009342 232 GGG----ASFGIIVSWKINLVAVPS 252 (537)
Q Consensus 232 gg~----g~~GiVt~~~~~~~p~~~ 252 (537)
+.. +++||||+++||++|.+.
T Consensus 175 s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 175 SIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCCccCCCEEEEEEEEEEEeCCc
Confidence 864 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.92 E-value=5.2e-25 Score=224.66 Aligned_cols=160 Identities=21% Similarity=0.245 Sum_probs=136.8
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHH
Q 009342 76 NPKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEISVDVEDKTAWVESGATVGQ 155 (537)
Q Consensus 76 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~ 155 (537)
...|.+|+.|+|++||+++|++|+++++|++++|||||+.+.+.+.+ +++|||++|++|++| +.+++||||+++.+
T Consensus 46 ~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id--~~~v~v~aGv~~~~ 121 (326)
T 1hsk_A 46 GGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVS--DDAIIAGSGAAIID 121 (326)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEc--CCEEEEeCCCcHHH
Confidence 45799999999999999999999999999999999999876554443 899999999999987 36999999999999
Q ss_pred HHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccC-chhhheeeEEEEcccCeeeeccCCCCchhhhhhhcc-
Q 009342 156 LNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYG-AAADHIVDAHMIDVKGRFLNRESMGEDLFWAIRGGG- 233 (537)
Q Consensus 156 l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G-~~~d~v~~~~vV~a~G~~~~~~~~~~dLf~a~rGgg- 233 (537)
|.+++.++|+.||.+.++.++ +|||.+..++.| || .++|+|++++||++||++++... .|++|++|+..
T Consensus 122 l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~l 192 (326)
T 1hsk_A 122 VSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSII 192 (326)
T ss_dssp HHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCHH
T ss_pred HHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCcccccc
Confidence 999999999876777777776 467777655444 88 99999999999999999997332 38899999742
Q ss_pred --CCceEEEEEEEEEEEec
Q 009342 234 --GASFGIIVSWKINLVAV 250 (537)
Q Consensus 234 --~g~~GiVt~~~~~~~p~ 250 (537)
.| ||||+++||++|.
T Consensus 193 ~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 193 QKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHTT--CEEEEEEEECEEC
T ss_pred CCCC--EEEEEEEEEEEcC
Confidence 13 9999999999998
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.90 E-value=2.3e-23 Score=212.76 Aligned_cols=163 Identities=13% Similarity=0.026 Sum_probs=141.1
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccEE-EeCCC-CeEEEcCCCCHH
Q 009342 77 PKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEIS-VDVED-KTAWVESGATVG 154 (537)
Q Consensus 77 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i~-~d~~~-~~v~v~~G~~~~ 154 (537)
..|.+++.|+|++||+++|++|+++++|+.++|||||..+.+. .+ |+||+|+ |++|. ++.++ .+++||||++|.
T Consensus 13 g~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~ 88 (340)
T 1uxy_A 13 HNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGENWH 88 (340)
T ss_dssp CBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBHH
T ss_pred ccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCCHH
Confidence 4689999999999999999999999999999999999876553 33 8999997 99985 56555 689999999999
Q ss_pred HHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccCc-hhhheeeEEEEcc-cCeeeeccCCCCchhhhhhhc
Q 009342 155 QLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGA-AADHIVDAHMIDV-KGRFLNRESMGEDLFWAIRGG 232 (537)
Q Consensus 155 ~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~-~~d~v~~~~vV~a-~G~~~~~~~~~~dLf~a~rGg 232 (537)
+|.+++.++|+.||....|.+++| ||+..++.+.||. ++|+|++++||++ +|++++.. +.|++|++|++
T Consensus 89 ~l~~~~~~~Gl~Gle~~~gIPGtV-------GGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~s 159 (340)
T 1uxy_A 89 RLVKYTLQEGMPGLENLALIPGCV-------GSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRDS 159 (340)
T ss_dssp HHHHHHHHTTCCSCGGGTTCCSBG-------GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTBC
T ss_pred HHHHHHHHCCCCccccccCCccch-------hHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCcC
Confidence 999999999988788777777655 6778888888995 8999999999996 99999733 36999999997
Q ss_pred cC----CceEEEEEEEEEEEecCC
Q 009342 233 GG----ASFGIIVSWKINLVAVPS 252 (537)
Q Consensus 233 g~----g~~GiVt~~~~~~~p~~~ 252 (537)
.. +++||||+++||++|.+.
T Consensus 160 ~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 160 IFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp GGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCcCCCCEEEEEEEEEEEcCCC
Confidence 53 369999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=1.9e-22 Score=199.04 Aligned_cols=151 Identities=20% Similarity=0.152 Sum_probs=126.1
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccCCCCeEEEEecCcccEEEeCCCCeEEEcCCCCHHHHH
Q 009342 78 KPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLSSISDVPFIIIDLINFSEISVDVEDKTAWVESGATVGQLN 157 (537)
Q Consensus 78 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gividl~~l~~i~~d~~~~~v~v~~G~~~~~l~ 157 (537)
.|. +|.|+|++||+++| ++|+.++|+|||..+.+.+.+ +|+||++++|++|++| + +||||++|.+|.
T Consensus 22 ~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd--~---~v~aG~~~~~l~ 88 (268)
T 2gqt_A 22 PAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLK--G---WVGAGTLLPLLV 88 (268)
T ss_dssp EEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTT--S---EEETTSBHHHHH
T ss_pred ceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEc--C---EEECCCCHHHHH
Confidence 456 99999999999999 899999999999887655432 3899999999999875 2 999999999999
Q ss_pred HHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccC-chhhheeeEEEEcccCeeeeccCCCCchhhhhhhccCCc
Q 009342 158 YRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYG-AAADHIVDAHMIDVKGRFLNRESMGEDLFWAIRGGGGAS 236 (537)
Q Consensus 158 ~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G-~~~d~v~~~~vV~a~G~~~~~~~~~~dLf~a~rGgg~g~ 236 (537)
+++.++|+.|+.+..|.+++| ||+..++++.|| .++|+|++++|| +||++++.. +.|++|++|++....
T Consensus 89 ~~~~~~Gl~Gle~~~giPGtv-------GGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~~~ 158 (268)
T 2gqt_A 89 QEAARAGLSGLEGLLGIPAQV-------GGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHLPP 158 (268)
T ss_dssp HHHHHTTEESCGGGTTCCCBH-------HHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCCST
T ss_pred HHHHHcCCcCCccccCccchh-------HHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCcCC
Confidence 999999987777777776654 555666677899 699999999999 999999733 368999999987322
Q ss_pred eEEEEEEEEEEEecC
Q 009342 237 FGIIVSWKINLVAVP 251 (537)
Q Consensus 237 ~GiVt~~~~~~~p~~ 251 (537)
-||||+++||++|.+
T Consensus 159 ~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 159 GGIVTRVRLKLKERP 173 (268)
T ss_dssp TCEEEEEEECCEECC
T ss_pred CceEEEEEEEEEeCC
Confidence 249999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.80 E-value=1e-19 Score=174.52 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=99.3
Q ss_pred EEEeCCCCeEEEcCCCCHHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccCchhhheeeEEEEcccCee
Q 009342 136 ISVDVEDKTAWVESGATVGQLNYRIAEKSQNLLAFPVGTCPSVGVGGHFSGGGYGALLRKYGAAADHIVDAHMIDVKGRF 215 (537)
Q Consensus 136 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~gl~~~~g~~~~vgvgG~~~ggg~g~~s~~~G~~~d~v~~~~vV~a~G~~ 215 (537)
|++|+++++|+||+|+++.+|+++|.++|+. +...+|+++. +|||++.+|++| ++||.. |+|++++||++||++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~-~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i 74 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLF-PPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRR 74 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEE-CSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCE-EeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCE
Confidence 4789999999999999999999999999854 2222355555 999999999999 899999 999999999999999
Q ss_pred ee-cc-----CCCCchhhhhhhccCCceEEEEEEEEEEEecCCeEEEEEEe
Q 009342 216 LN-RE-----SMGEDLFWAIRGGGGASFGIIVSWKINLVAVPSTVTVFAVP 260 (537)
Q Consensus 216 ~~-~~-----~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~~~~~~~~~~ 260 (537)
++ +. ..++||||+++|++ |+|||||+++||++|.++....+.+.
T Consensus 75 ~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 75 VRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 86 32 24589999999997 89999999999999998765544443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.18 E-value=3.7e-06 Score=83.68 Aligned_cols=157 Identities=18% Similarity=0.171 Sum_probs=103.1
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC--CccCCCCeEEEEecC---cccEEEeCCCCeEEEcCCC
Q 009342 77 PKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGL--SSISDVPFIIIDLIN---FSEISVDVEDKTAWVESGA 151 (537)
Q Consensus 77 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~--~~~~~~~gividl~~---l~~i~~d~~~~~v~v~~G~ 151 (537)
+.+--++.|+|.+|+.++++.. +.+..+.|||++.... .... ..+++||+++ |+.|+.+ ++.+++|+|+
T Consensus 3 ~~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~-~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~ 76 (287)
T 1ffv_C 3 PPRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFA-QPEHLIDINRIPELRGIREE--GSTVVIGAMT 76 (287)
T ss_dssp CCCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSC-CCSEEEECTTCGGGCCEEEE--TTEEEEETTC
T ss_pred CCcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCC-CCCEEEECCCChhhcceEec--CCEEEEccCC
Confidence 3456789999999999998753 3678999999995431 1111 1278999984 7778774 4579999999
Q ss_pred CHHHHHHH-HHHhcCCceee----ccCCC--CcccchhhhcCCCCCCcccccCchhhhee-------eEEEEcccCeeee
Q 009342 152 TVGQLNYR-IAEKSQNLLAF----PVGTC--PSVGVGGHFSGGGYGALLRKYGAAADHIV-------DAHMIDVKGRFLN 217 (537)
Q Consensus 152 ~~~~l~~~-l~~~g~~gl~~----~~g~~--~~vgvgG~~~ggg~g~~s~~~G~~~d~v~-------~~~vV~a~G~~~~ 217 (537)
++.+|.+. +.+.++.+|.. ..|.. ...++||.+..+.. ..|.+. .+++..++|+...
T Consensus 77 tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~r~i 147 (287)
T 1ffv_C 77 VENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGRRTV 147 (287)
T ss_dssp BHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEEEEE
T ss_pred cHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCceEEE
Confidence 99999963 44444443332 22221 13468899887632 345443 5888889994332
Q ss_pred ccCCCCchhhhhhhccCCceEEEEEEEEEEEecC
Q 009342 218 RESMGEDLFWAIRGGGGASFGIIVSWKINLVAVP 251 (537)
Q Consensus 218 ~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~~ 251 (537)
. -.|+|+.+|-..-..--|||+++|.+.+..
T Consensus 148 ~---~~df~~g~~~t~l~~~eii~~i~ip~~~~~ 178 (287)
T 1ffv_C 148 P---ADGFFLGTYMTLLEENEVMVEIRVPAFAQG 178 (287)
T ss_dssp E---STTTEEETTEESCCTTCEEEEEEEECCCTT
T ss_pred E---HHHHhcCcccccCCCCCEEEEEEecCCCCC
Confidence 2 248888776432222259999999876543
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.41 E-value=0.00023 Score=70.74 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=94.6
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC-CccCCCCeEEEEecC---cccEEEeCCCCeEEEcCCCCH
Q 009342 78 KPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGL-SSISDVPFIIIDLIN---FSEISVDVEDKTAWVESGATV 153 (537)
Q Consensus 78 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~gividl~~---l~~i~~d~~~~~v~v~~G~~~ 153 (537)
.+--++.|+|.+|+.++++.. +-+..+.+||++.... -........+||+++ |+.|+.+ ++.++||+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 456689999999999888633 3458889999995321 011011268999986 5677664 457999999999
Q ss_pred HHHHH--HHHHhcCCceeec---cCCC---CcccchhhhcCCCCCCcccccCchhhhee-------eEEEEcccCeeeec
Q 009342 154 GQLNY--RIAEKSQNLLAFP---VGTC---PSVGVGGHFSGGGYGALLRKYGAAADHIV-------DAHMIDVKGRFLNR 218 (537)
Q Consensus 154 ~~l~~--~l~~~g~~gl~~~---~g~~---~~vgvgG~~~ggg~g~~s~~~G~~~d~v~-------~~~vV~a~G~~~~~ 218 (537)
.+|.+ .+.+ ...+|.-. .++. ...++||.+..+. ...|.+. .+++..++|+....
T Consensus 79 ~~l~~~~~~~~-~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~v~ 148 (288)
T 1n62_C 79 HALIGSDFLAA-KLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARIVA 148 (288)
T ss_dssp HHHHHCHHHHH-HCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEEEE
T ss_pred HHHhcChHHHH-HHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEEEE
Confidence 99984 4433 22222211 1111 1236899988762 1345443 66677788853322
Q ss_pred cCCCCchhhhhhhccCCceEEEEEEEEEEEec
Q 009342 219 ESMGEDLFWAIRGGGGASFGIIVSWKINLVAV 250 (537)
Q Consensus 219 ~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p~ 250 (537)
- .|+|..++--.-..--|||++.|...+.
T Consensus 149 ~---~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 149 A---RDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp H---HHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred H---HHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 1 3666554421111225899999876553
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.96 E-value=0.0013 Score=69.48 Aligned_cols=152 Identities=14% Similarity=0.097 Sum_probs=98.2
Q ss_pred EEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC--CccCCCCeEEEEecC---cccEEEeCCCCeEEEcCCCCHHH
Q 009342 81 FIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGL--SSISDVPFIIIDLIN---FSEISVDVEDKTAWVESGATVGQ 155 (537)
Q Consensus 81 ~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~--~~~~~~~gividl~~---l~~i~~d~~~~~v~v~~G~~~~~ 155 (537)
.++.|+|.+|+.++++... +..+.+||++.... .... ..+++||+++ |+.|+.+ ++.++||+|+++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~~----~a~ilaGGT~L~~~~k~~~~-~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAHP----EATLIAGGTDVSLWVTKALR-DLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHCT----TCEEESSCTTTTHHHHTSCC-CCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhCC----CCEEEeCCchhhhhhhccCC-CCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 3578999999998887532 47888999997542 1111 1368999988 6788775 44699999999999
Q ss_pred HHHHHHHhcCCce----eeccCCC--CcccchhhhcCCCCCCcccccCchhhhee----eEEEEcccCeeeeccCCCCch
Q 009342 156 LNYRIAEKSQNLL----AFPVGTC--PSVGVGGHFSGGGYGALLRKYGAAADHIV----DAHMIDVKGRFLNRESMGEDL 225 (537)
Q Consensus 156 l~~~l~~~g~~gl----~~~~g~~--~~vgvgG~~~ggg~g~~s~~~G~~~d~v~----~~~vV~a~G~~~~~~~~~~dL 225 (537)
|.+.+ +..+.+| ....+.. ...++||.+..+.+ .+-...-++ .+++..++|+.... -.|+
T Consensus 252 l~~~l-~~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~R~vp---~~dF 321 (462)
T 2w3s_A 252 LRAFA-EGPHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQERRRMP---LEDF 321 (462)
T ss_dssp HHHHH-TTTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBCCCCB---GGGG
T ss_pred HHHHH-HHHhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCceEEEE---HHHh
Confidence 99874 3333222 1122222 23468899988653 244555666 78888888843222 2477
Q ss_pred hhhhhhccCCceEEEEEEEEEEEe
Q 009342 226 FWAIRGGGGASFGIIVSWKINLVA 249 (537)
Q Consensus 226 f~a~rGgg~g~~GiVt~~~~~~~p 249 (537)
|..+|-..-..--|||++.|...+
T Consensus 322 ~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 322 FLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EEETTEESCCTTCEEEEEEEESCC
T ss_pred hcccccccCCCCcEEEEEEEecCC
Confidence 876653221122499999987654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=95.84 E-value=0.027 Score=56.08 Aligned_cols=156 Identities=9% Similarity=-0.001 Sum_probs=89.6
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC---CccCCCCeEEEEecC---cccEEEeCCCCeEEEcCCC
Q 009342 78 KPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGL---SSISDVPFIIIDLIN---FSEISVDVEDKTAWVESGA 151 (537)
Q Consensus 78 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~---~~~~~~~gividl~~---l~~i~~d~~~~~v~v~~G~ 151 (537)
.+...+.|+|.+|..++++- +. ...+.+||++.... .... ...+||+++ |+.|+.+ ++.++||+++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~--~~~lIdl~~i~eL~~I~~~--~~~l~IGA~v 80 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQL--FPMIICPAWIPELNAVEHG--PEGISFGAAC 80 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCC--CSEEEECTTCGGGGCEEEC--SSEEEEETTC
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCC--CCEEEECCCChhhcceEEC--CCeEEEccCC
Confidence 45678999999999887743 22 25788999986421 1111 257899986 5566653 5689999999
Q ss_pred CHHHHHHHHHHhc----------CCceeec---cCCC---CcccchhhhcCCCCCCcccccCchhhhee----eEEEEcc
Q 009342 152 TVGQLNYRIAEKS----------QNLLAFP---VGTC---PSVGVGGHFSGGGYGALLRKYGAAADHIV----DAHMIDV 211 (537)
Q Consensus 152 ~~~~l~~~l~~~g----------~~gl~~~---~g~~---~~vgvgG~~~ggg~g~~s~~~G~~~d~v~----~~~vV~a 211 (537)
++.++.+.+.++- ...|.-. .++. ...++||.+..+.. .+-..--++ .+++..+
T Consensus 81 t~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~ 154 (305)
T 3nvz_B 81 ALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSR 154 (305)
T ss_dssp BHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEET
T ss_pred cHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcC
Confidence 9999988765320 0001000 1111 23468898877632 111222222 5667777
Q ss_pred cCeeeeccCCCCchhhhhhhccCCceEEEEEEEEEEEe
Q 009342 212 KGRFLNRESMGEDLFWAIRGGGGASFGIIVSWKINLVA 249 (537)
Q Consensus 212 ~G~~~~~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~p 249 (537)
+|+....- ..|+|-+++--.-..--|||++.|...+
T Consensus 155 ~G~R~vp~--~~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 155 GTRRTVPM--DHTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp TEEEEEEC--CGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred CCcEEEEe--ehHhhcCcccccCCCCcEEEEEEecCCC
Confidence 88543321 1256654331110111399999886543
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=92.42 E-value=0.16 Score=50.07 Aligned_cols=151 Identities=17% Similarity=0.102 Sum_probs=89.4
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC---CccCCCCeEEEEecC---cccEEEeCCCCeEEEcCC
Q 009342 77 PKPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGL---SSISDVPFIIIDLIN---FSEISVDVEDKTAWVESG 150 (537)
Q Consensus 77 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~---~~~~~~~gividl~~---l~~i~~d~~~~~v~v~~G 150 (537)
+.|--++.|+|.+|..++++- +-...+.+||++.... .... ...+||+++ |+.|+.+ ++.++||++
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~--~~~lIdl~~i~eL~~I~~~--~~~l~IGA~ 74 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVY--PSCLVDLRNVSELFEISQS--AGILSVGAM 74 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCC--CSEEEECTTCGGGGCEEEE--TTEEEEETT
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCC--CCEEEECCCChhhcCeEEc--CCEEEEcCC
Confidence 345668999999999988863 2236778999994311 1111 258899987 5667664 568999999
Q ss_pred CCHHHHHH--HHHHhcCCceeec---cCCC---CcccchhhhcCCCCCCcccccCchhhhee-------eEEEEcccCee
Q 009342 151 ATVGQLNY--RIAEKSQNLLAFP---VGTC---PSVGVGGHFSGGGYGALLRKYGAAADHIV-------DAHMIDVKGRF 215 (537)
Q Consensus 151 ~~~~~l~~--~l~~~g~~gl~~~---~g~~---~~vgvgG~~~ggg~g~~s~~~G~~~d~v~-------~~~vV~a~G~~ 215 (537)
+++.+|.+ .+.++ ...|.-. .|+. ...++||.+..+- ...|... .+++..++|+.
T Consensus 75 vt~~~l~~~~~~~~~-~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R 144 (288)
T 1t3q_C 75 VTHFRNKTDPTVAKC-VPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVR 144 (288)
T ss_dssp CBHHHHHHCHHHHHH-CTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEE
T ss_pred CcHHHHhcCHHHHHH-HHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceE
Confidence 99999986 33332 1111111 1211 2336788887542 1356554 67777778864
Q ss_pred eeccCCCCchhhhhhhccCCceEEEEEEEEEEE
Q 009342 216 LNRESMGEDLFWAIRGGGGASFGIIVSWKINLV 248 (537)
Q Consensus 216 ~~~~~~~~dLf~a~rGgg~g~~GiVt~~~~~~~ 248 (537)
...- .|+|...+--.-..--|||++.|...
T Consensus 145 ~vp~---~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 145 SVSA---TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp EEEH---HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred EEEH---HHHhcCcccccCCCCCEEEEEEecCC
Confidence 4321 25554332111011248999988653
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=90.17 E-value=0.4 Score=47.32 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=51.6
Q ss_pred ccEEEecCCHHHHHHHHHHHHhCCC-eEEEEcCCCCCCCCC-ccCCCCeEEEEecCc---ccEEEeCCCCeEEEcCCCCH
Q 009342 79 PLFIITPFHVSEIQAAVKCSKKNGL-QIRVRSGGHDHEGLS-SISDVPFIIIDLINF---SEISVDVEDKTAWVESGATV 153 (537)
Q Consensus 79 p~~vv~p~~~~dv~~~v~~a~~~~~-~~~~~ggGh~~~g~~-~~~~~~gividl~~l---~~i~~d~~~~~v~v~~G~~~ 153 (537)
|--.+.|+|.+|..++++ +++- ...+.+||++....- ........+||++++ +.|+. +++.++||+++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 456789999999877764 3332 467789999853210 001012588999885 55655 4568999999999
Q ss_pred HHHHH
Q 009342 154 GQLNY 158 (537)
Q Consensus 154 ~~l~~ 158 (537)
.++.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99874
No 35
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=86.43 E-value=0.9 Score=48.49 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=23.5
Q ss_pred hhhhhhcccHHHH-HHhHhhcCCCCCCcCCC
Q 009342 496 WGKKYFKNNFYRL-VHVKTMVDPENFFRNEQ 525 (537)
Q Consensus 496 ~~~~YyG~ny~RL-~~IK~kYDP~nvF~~~q 525 (537)
|...+||+++-+| ++||+.+||+|+|+--.
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGk 511 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGR 511 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 4478888765554 99999999999997443
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=83.88 E-value=1.8 Score=43.19 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=52.6
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCC---CCccCCCCeEEEEecCc---ccEEEeCCCCeEEEcCCC
Q 009342 78 KPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEG---LSSISDVPFIIIDLINF---SEISVDVEDKTAWVESGA 151 (537)
Q Consensus 78 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g---~~~~~~~~gividl~~l---~~i~~d~~~~~v~v~~G~ 151 (537)
.|--++.|+|.+|..++++ +. .-.+.+||++... ..... ...+||++++ +.|+.+. ++.++||+++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~~--~a~~lAGGT~l~~~~k~~~~~--p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~v 76 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---AE--ATLPLGAGTDLLPNLRRGLGH--PAALVDLTGIDGLATISTLA-DGSLRIGAGA 76 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---ST--TEEEESSCTTHHHHHHTTSCC--CSEEEECTTSTTTTCEEECT-TSCEEEETTC
T ss_pred CceEEEccCCHHHHHHHHh---CC--CCEEEECchhHHHHHhccCCC--CCEEEECCCChhhcceEECC-CCeEEEccCC
Confidence 4556889999999988776 22 4677899998532 11111 2588999876 5666643 3479999999
Q ss_pred CHHHHHHH
Q 009342 152 TVGQLNYR 159 (537)
Q Consensus 152 ~~~~l~~~ 159 (537)
++.+|.+.
T Consensus 77 t~~~l~~~ 84 (324)
T 1rm6_B 77 TLEAIAEH 84 (324)
T ss_dssp BHHHHHHC
T ss_pred cHHHHHhC
Confidence 99998763
No 37
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=80.46 E-value=3 Score=45.83 Aligned_cols=28 Identities=39% Similarity=0.604 Sum_probs=23.8
Q ss_pred hhhhhhhcc-cHHHHHHhHhhcCCCCCCc
Q 009342 495 VWGKKYFKN-NFYRLVHVKTMVDPENFFR 522 (537)
Q Consensus 495 ~~~~~YyG~-ny~RL~~IK~kYDP~nvF~ 522 (537)
.|-..+||+ .++.+++||+.+||+|+|+
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILN 653 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFG 653 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 466667774 7999999999999999996
No 38
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=62.69 E-value=7.6 Score=46.09 Aligned_cols=78 Identities=6% Similarity=-0.014 Sum_probs=52.9
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCC-ccCCCCeEEEEecCc---ccEEEeCCCCeEEEcCCCCH
Q 009342 78 KPLFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLS-SISDVPFIIIDLINF---SEISVDVEDKTAWVESGATV 153 (537)
Q Consensus 78 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~-~~~~~~gividl~~l---~~i~~d~~~~~v~v~~G~~~ 153 (537)
.+.-.+.|.|.+|+.++++--. .-.+.+||++..-.- ........+||++++ +.|+.+ ++.++|||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~~----~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQHP----EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHCT----TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhhCC----CCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 3456889999999988765321 246778998843110 000012578999875 566664 567999999999
Q ss_pred HHHHHHHH
Q 009342 154 GQLNYRIA 161 (537)
Q Consensus 154 ~~l~~~l~ 161 (537)
.+|.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 39
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=53.29 E-value=22 Score=38.07 Aligned_cols=23 Identities=17% Similarity=0.160 Sum_probs=19.2
Q ss_pred ccHHHHHHhHhhcCCCCCCcCCC
Q 009342 503 NNFYRLVHVKTMVDPENFFRNEQ 525 (537)
Q Consensus 503 ~ny~RL~~IK~kYDP~nvF~~~q 525 (537)
..++-+++||+.+||+|+|+--.
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk 545 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGK 545 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTG
T ss_pred HHHHHHHHHHHHcCccCCCCCCc
Confidence 36788899999999999997443
No 40
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=50.20 E-value=6.8 Score=42.04 Aligned_cols=23 Identities=22% Similarity=0.293 Sum_probs=21.0
Q ss_pred ccHHHHHHhHhhcCCCCCCcCCC
Q 009342 503 NNFYRLVHVKTMVDPENFFRNEQ 525 (537)
Q Consensus 503 ~ny~RL~~IK~kYDP~nvF~~~q 525 (537)
.++++.+++++++||+++|.+..
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999999998753
No 41
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=49.99 E-value=7.2 Score=40.94 Aligned_cols=29 Identities=10% Similarity=0.115 Sum_probs=24.6
Q ss_pred hhhhhhhhcc-cHHHHHHhHhhcCCCCCCc
Q 009342 494 SVWGKKYFKN-NFYRLVHVKTMVDPENFFR 522 (537)
Q Consensus 494 ~~~~~~YyG~-ny~RL~~IK~kYDP~nvF~ 522 (537)
..|-..+||+ .++-+++||+.+||+|+++
T Consensus 442 ~~~l~~~~~~~~~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 442 RDELAEVKDKTAIELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHCTTSCBS
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 3576777774 7999999999999999986
No 42
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=44.60 E-value=13 Score=39.96 Aligned_cols=30 Identities=17% Similarity=0.061 Sum_probs=22.0
Q ss_pred hcccHHHHHHhHhhcCCCCCCcCCCCCCCCC
Q 009342 501 FKNNFYRLVHVKTMVDPENFFRNEQSIPPFN 531 (537)
Q Consensus 501 yG~ny~RL~~IK~kYDP~nvF~~~qsI~p~~ 531 (537)
|++..+ |++||+.+||+|+|+--.-+.|..
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t~~~ 564 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKTSKR 564 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTCCCS
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcCCcc
Confidence 344444 999999999999997655544443
No 43
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=36.72 E-value=33 Score=28.59 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=34.4
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCC
Q 009342 70 IFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQI-RVRSGGH 112 (537)
Q Consensus 70 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh 112 (537)
+|.. ...|..|+.+.+++++.++.+-|++.|++. .++=.|+
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 4743 458999999999999999999999999996 5666666
No 44
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=36.48 E-value=13 Score=39.59 Aligned_cols=23 Identities=17% Similarity=0.226 Sum_probs=21.1
Q ss_pred cccHHHHHHhHhhcCCCCCCcCC
Q 009342 502 KNNFYRLVHVKTMVDPENFFRNE 524 (537)
Q Consensus 502 G~ny~RL~~IK~kYDP~nvF~~~ 524 (537)
|.|++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 45
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=30.35 E-value=20 Score=38.55 Aligned_cols=27 Identities=19% Similarity=0.431 Sum_probs=18.1
Q ss_pred hhhhhhcc-cHHHHHHhHhhcCCCCCCc
Q 009342 496 WGKKYFKN-NFYRLVHVKTMVDPENFFR 522 (537)
Q Consensus 496 ~~~~YyG~-ny~RL~~IK~kYDP~nvF~ 522 (537)
|-...||+ .++=+++||+.+||+|+|+
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlN 579 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICN 579 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBS
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCC
Confidence 55555564 6899999999999999986
No 46
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=27.51 E-value=68 Score=26.87 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=34.4
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 009342 70 IFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQI-RVRSGGHD 113 (537)
Q Consensus 70 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh~ 113 (537)
+|.. ...+..|+.+.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 4733 347899999999999999999999999996 56667764
No 47
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=26.18 E-value=34 Score=40.62 Aligned_cols=77 Identities=13% Similarity=0.048 Sum_probs=48.4
Q ss_pred EEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCC--CCCccCCCCeEEEEecCcccE-EEeCCCCeEEEcCCCCHHHHH
Q 009342 81 FIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHE--GLSSISDVPFIIIDLINFSEI-SVDVEDKTAWVESGATVGQLN 157 (537)
Q Consensus 81 ~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~--g~~~~~~~~gividl~~l~~i-~~d~~~~~v~v~~G~~~~~l~ 157 (537)
..+.|.|.+|+.++..-- -+.++ ..|+++.. -..... .-.++||+.+..+. .+..++..++||+++++.++.
T Consensus 242 ~w~~P~tl~el~~l~~~~--p~a~l--vaGnT~~gl~~~~~~~-~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMKH--PSAPL--VIGNTYLGLHMKFTDV-SYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp EEEECSSHHHHHHHHHHC--TTSCB--CSSCTTHHHHHC--CC-CCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred eEecCCCHHHHHHHHHHC--CCCeE--EEecccceeeEeecCC-CCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 467899999998875422 23333 44665521 111111 12588998875443 344456689999999999998
Q ss_pred HHHHH
Q 009342 158 YRIAE 162 (537)
Q Consensus 158 ~~l~~ 162 (537)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 48
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=25.62 E-value=99 Score=25.69 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=34.3
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 009342 70 IFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQI-RVRSGGHD 113 (537)
Q Consensus 70 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh~ 113 (537)
+|.. ...|..|+.+.+++++.++.+-|++.|+|. .++-.|+.
T Consensus 49 ~W~~--~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 49 AWFR--EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 3643 457899999999999999999999999996 45666763
No 49
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=24.86 E-value=27 Score=28.75 Aligned_cols=14 Identities=21% Similarity=0.536 Sum_probs=12.0
Q ss_pred HHhHhhcCCCCCCc
Q 009342 509 VHVKTMVDPENFFR 522 (537)
Q Consensus 509 ~~IK~kYDP~nvF~ 522 (537)
.+|++||||+|-++
T Consensus 84 ~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 84 AQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHCTTCTTT
T ss_pred HHHHHHHCCCchHH
Confidence 45789999999886
No 50
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=23.85 E-value=1.2e+02 Score=26.49 Aligned_cols=39 Identities=15% Similarity=0.266 Sum_probs=32.7
Q ss_pred cEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCC
Q 009342 80 LFIITPFHVSEIQAAVKCSKKNGLQIRVRSGGHDHEGLS 118 (537)
Q Consensus 80 ~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~ 118 (537)
...+.|.+.++++++++.+.+.+..+.+..||.+....+
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D 85 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKN 85 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCc
Confidence 457889999999999999887668899999998875443
No 51
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=21.90 E-value=1.1e+02 Score=25.32 Aligned_cols=42 Identities=12% Similarity=0.149 Sum_probs=34.1
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 009342 70 IFSTPANPKPLFIITPFHVSEIQAAVKCSKKNGLQI-RVRSGGHD 113 (537)
Q Consensus 70 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh~ 113 (537)
+|. ....|..|+.+.+++++.++.+-|++.|++. .++-.|+.
T Consensus 45 ~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 45 EWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 364 2458999999999999999999999999996 55666653
No 52
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=21.73 E-value=31 Score=28.50 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=11.7
Q ss_pred HHhHhhcCCCCCCc
Q 009342 509 VHVKTMVDPENFFR 522 (537)
Q Consensus 509 ~~IK~kYDP~nvF~ 522 (537)
.+|++||||+|-++
T Consensus 82 ~~L~~KyDP~g~y~ 95 (112)
T 1k19_A 82 RELTAKYDPTGNWR 95 (112)
T ss_dssp HHHHHSSTTTCSSH
T ss_pred HHHHHHHCCCchHH
Confidence 45789999999885
No 53
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=21.46 E-value=1.1e+02 Score=25.04 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=30.7
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCC
Q 009342 76 NPKPLFIITPFHVSEIQAAVKCSKKNGLQI-RVRSGGH 112 (537)
Q Consensus 76 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh 112 (537)
...|..|+.+.+++++.++.+-|++.|+|. .++-.|+
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 458999999999999999999999999986 4455554
No 54
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.77 E-value=1.5e+02 Score=25.94 Aligned_cols=38 Identities=18% Similarity=0.072 Sum_probs=31.9
Q ss_pred cEEEecCCHHHHHHHHHHHHhC-CCeEEEEcCCCCCCCC
Q 009342 80 LFIITPFHVSEIQAAVKCSKKN-GLQIRVRSGGHDHEGL 117 (537)
Q Consensus 80 ~~vv~p~~~~dv~~~v~~a~~~-~~~~~~~ggGh~~~g~ 117 (537)
...+.|.+.++|.++|+.+.+. +..+.+..||.+....
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~ 84 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEG 84 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTT
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCC
Confidence 4578899999999999998876 6889999999886543
Done!