Query 009344
Match_columns 537
No_of_seqs 579 out of 3171
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 11:58:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009344.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009344hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0510 Ankyrin repeat protein 100.0 5.8E-38 1.3E-42 319.1 35.4 275 13-297 112-408 (929)
2 PHA03100 ankyrin repeat protei 100.0 2E-38 4.2E-43 335.1 28.7 268 14-294 27-311 (480)
3 PHA02874 ankyrin repeat protei 100.0 1E-37 2.2E-42 324.5 33.0 266 14-292 27-315 (434)
4 PHA03095 ankyrin-like protein; 100.0 7.9E-38 1.7E-42 329.8 30.3 269 12-293 37-317 (471)
5 PHA02716 CPXV016; CPX019; EVM0 100.0 4.4E-37 9.5E-42 326.7 28.2 269 13-293 167-567 (764)
6 PHA02874 ankyrin repeat protei 100.0 2.1E-36 4.5E-41 314.7 31.6 271 24-307 3-296 (434)
7 PHA02946 ankyin-like protein; 100.0 1.6E-36 3.5E-41 313.4 29.8 256 22-290 37-321 (446)
8 PHA02876 ankyrin repeat protei 100.0 3.2E-36 6.9E-41 330.4 32.6 285 11-306 167-483 (682)
9 PHA02946 ankyin-like protein; 100.0 6.7E-36 1.4E-40 308.8 29.2 270 11-303 61-359 (446)
10 PHA02791 ankyrin-like protein; 100.0 8.5E-36 1.8E-40 287.3 26.7 236 32-293 9-247 (284)
11 PHA02875 ankyrin repeat protei 100.0 3.5E-35 7.5E-40 304.1 32.0 253 22-286 2-261 (413)
12 PHA02876 ankyrin repeat protei 100.0 7.5E-36 1.6E-40 327.5 28.1 276 18-304 37-413 (682)
13 PHA02878 ankyrin repeat protei 100.0 1.9E-35 4E-40 311.1 28.0 254 19-289 34-324 (477)
14 PHA03095 ankyrin-like protein; 100.0 4.2E-35 9E-40 309.1 29.3 267 27-306 19-297 (471)
15 KOG0510 Ankyrin repeat protein 100.0 1.1E-35 2.4E-40 302.6 22.1 269 15-294 81-369 (929)
16 PHA02989 ankyrin repeat protei 100.0 3.9E-34 8.5E-39 302.0 29.4 266 12-291 26-314 (494)
17 PHA02791 ankyrin-like protein; 100.0 7.3E-34 1.6E-38 273.9 26.1 218 16-255 24-243 (284)
18 PHA03100 ankyrin repeat protei 100.0 8.9E-34 1.9E-38 299.6 27.3 262 32-306 12-290 (480)
19 PHA02875 ankyrin repeat protei 100.0 1.2E-33 2.7E-38 292.5 27.0 229 61-295 2-231 (413)
20 PHA02716 CPXV016; CPX019; EVM0 100.0 2.1E-33 4.5E-38 298.7 28.7 277 19-307 134-543 (764)
21 KOG4412 26S proteasome regulat 100.0 3.5E-34 7.7E-39 242.0 15.7 208 22-239 3-211 (226)
22 PHA02878 ankyrin repeat protei 100.0 1E-32 2.2E-37 290.4 29.5 269 26-307 4-308 (477)
23 PHA02798 ankyrin-like protein; 100.0 6.6E-33 1.4E-37 292.3 27.7 261 20-293 34-318 (489)
24 KOG4412 26S proteasome regulat 100.0 1.3E-33 2.7E-38 238.7 15.7 207 61-274 3-212 (226)
25 PHA02917 ankyrin-like protein; 100.0 4.7E-32 1E-36 290.5 30.5 284 13-307 23-493 (661)
26 PHA02989 ankyrin repeat protei 100.0 7.1E-31 1.5E-35 277.3 28.4 262 32-307 13-297 (494)
27 PHA02730 ankyrin-like protein; 100.0 1.7E-30 3.7E-35 271.3 27.2 277 17-303 36-421 (672)
28 KOG0508 Ankyrin repeat protein 100.0 3.7E-31 8E-36 254.2 19.9 194 19-218 39-235 (615)
29 PHA02798 ankyrin-like protein; 100.0 2.4E-30 5.3E-35 272.8 26.1 241 11-264 60-322 (489)
30 KOG4177 Ankyrin [Cell wall/mem 100.0 9.3E-32 2E-36 290.9 15.5 279 15-306 367-651 (1143)
31 PHA02730 ankyrin-like protein; 100.0 1.4E-29 3E-34 264.5 27.0 119 176-297 358-493 (672)
32 KOG0509 Ankyrin repeat and DHH 100.0 1.6E-30 3.5E-35 260.6 19.0 210 62-276 45-255 (600)
33 KOG0509 Ankyrin repeat and DHH 100.0 7.2E-30 1.6E-34 256.0 18.3 212 20-242 42-255 (600)
34 KOG4177 Ankyrin [Cell wall/mem 100.0 2.4E-30 5.1E-35 280.0 15.1 280 14-306 333-613 (1143)
35 PHA02917 ankyrin-like protein; 100.0 1.5E-28 3.3E-33 263.5 25.6 242 35-291 12-301 (661)
36 PHA02792 ankyrin-like protein; 100.0 1.1E-27 2.3E-32 247.8 25.6 262 18-292 67-479 (631)
37 KOG0508 Ankyrin repeat protein 100.0 6.2E-28 1.3E-32 232.1 15.7 220 27-253 9-236 (615)
38 PHA02792 ankyrin-like protein; 99.9 5.7E-26 1.2E-30 235.0 25.6 274 19-306 34-450 (631)
39 PHA02859 ankyrin repeat protei 99.9 5.7E-26 1.2E-30 211.4 20.5 173 96-276 21-202 (209)
40 PHA02859 ankyrin repeat protei 99.9 6.8E-26 1.5E-30 210.8 20.4 179 57-243 17-203 (209)
41 TIGR00870 trp transient-recept 99.9 5.2E-24 1.1E-28 235.8 36.3 239 20-291 15-282 (743)
42 PHA02795 ankyrin-like protein; 99.9 1.8E-25 4E-30 223.4 20.3 188 67-262 83-291 (437)
43 PHA02795 ankyrin-like protein; 99.9 6.2E-25 1.3E-29 219.7 20.6 205 77-294 65-290 (437)
44 PF13962 PGG: Domain of unknow 99.9 1.6E-25 3.4E-30 185.9 12.1 112 343-460 1-113 (113)
45 KOG0507 CASK-interacting adapt 99.9 5.7E-25 1.2E-29 223.1 14.5 247 23-276 4-264 (854)
46 KOG0502 Integral membrane anky 99.9 1.5E-25 3.2E-30 195.4 7.5 256 24-296 33-288 (296)
47 TIGR00870 trp transient-recept 99.9 2.8E-24 6.2E-29 237.9 18.6 230 12-274 42-298 (743)
48 KOG0502 Integral membrane anky 99.9 3.7E-24 8E-29 186.8 11.6 241 16-271 56-296 (296)
49 PLN03192 Voltage-dependent pot 99.9 1.1E-22 2.3E-27 226.7 22.9 179 92-277 521-700 (823)
50 KOG0507 CASK-interacting adapt 99.9 1.9E-23 4.1E-28 212.2 14.5 244 63-311 5-266 (854)
51 PLN03192 Voltage-dependent pot 99.9 7.8E-22 1.7E-26 219.8 22.3 179 57-243 521-700 (823)
52 KOG0505 Myosin phosphatase, re 99.9 4E-22 8.6E-27 196.3 14.2 234 20-276 38-274 (527)
53 KOG4369 RTK signaling protein 99.9 6E-23 1.3E-27 214.0 8.1 276 11-296 779-1057(2131)
54 KOG0514 Ankyrin repeat protein 99.9 1.1E-21 2.4E-26 183.6 12.0 161 126-288 264-429 (452)
55 KOG4369 RTK signaling protein 99.9 1.6E-22 3.5E-27 210.9 6.3 261 18-287 820-1081(2131)
56 KOG0514 Ankyrin repeat protein 99.8 1.3E-20 2.7E-25 176.6 11.4 165 89-255 261-430 (452)
57 KOG3676 Ca2+-permeable cation 99.8 3.6E-18 7.8E-23 176.5 27.3 219 22-254 101-330 (782)
58 PHA02741 hypothetical protein; 99.8 2.5E-19 5.5E-24 161.2 14.8 132 159-292 16-158 (169)
59 KOG0505 Myosin phosphatase, re 99.8 3.3E-19 7.2E-24 175.8 16.0 224 64-304 43-269 (527)
60 PHA02743 Viral ankyrin protein 99.8 3.8E-19 8.3E-24 159.3 14.1 134 160-295 16-157 (166)
61 PHA02743 Viral ankyrin protein 99.8 6.9E-19 1.5E-23 157.6 15.0 138 127-267 17-162 (166)
62 PHA02884 ankyrin repeat protei 99.8 3.9E-18 8.5E-23 164.6 20.7 154 127-291 29-187 (300)
63 PHA02736 Viral ankyrin protein 99.8 3.9E-19 8.4E-24 157.7 11.3 132 158-292 11-152 (154)
64 PHA02741 hypothetical protein; 99.8 1.4E-18 3.1E-23 156.3 15.1 133 54-187 14-155 (169)
65 KOG0512 Fetal globin-inducing 99.8 1.8E-18 3.8E-23 146.0 13.7 146 132-279 65-211 (228)
66 PHA02736 Viral ankyrin protein 99.8 8.8E-19 1.9E-23 155.4 10.9 142 10-155 5-151 (154)
67 PHA02884 ankyrin repeat protei 99.8 1.1E-17 2.4E-22 161.5 17.3 155 54-220 25-184 (300)
68 KOG0195 Integrin-linked kinase 99.8 3.3E-19 7.1E-24 162.0 5.9 151 139-292 9-159 (448)
69 KOG3676 Ca2+-permeable cation 99.8 6.1E-16 1.3E-20 160.2 29.2 188 98-288 103-330 (782)
70 KOG0512 Fetal globin-inducing 99.7 6.4E-17 1.4E-21 136.6 13.2 145 25-177 66-211 (228)
71 cd00204 ANK ankyrin repeats; 99.6 7.7E-15 1.7E-19 124.5 14.4 122 19-149 4-125 (126)
72 PF12796 Ank_2: Ankyrin repeat 99.6 3.2E-15 6.9E-20 119.3 10.7 89 168-263 1-89 (89)
73 KOG0195 Integrin-linked kinase 99.6 5E-16 1.1E-20 141.4 6.2 137 172-310 8-144 (448)
74 cd00204 ANK ankyrin repeats; 99.6 1.4E-14 2.9E-19 123.0 14.7 122 161-285 4-125 (126)
75 PF12796 Ank_2: Ankyrin repeat 99.6 1.4E-14 3.1E-19 115.5 10.8 87 202-294 1-87 (89)
76 COG0666 Arp FOG: Ankyrin repea 99.5 1.9E-12 4.1E-17 122.1 18.1 124 164-289 73-203 (235)
77 COG0666 Arp FOG: Ankyrin repea 99.5 1.7E-12 3.6E-17 122.5 17.7 136 118-255 61-203 (235)
78 KOG4214 Myotrophin and similar 99.4 9.5E-13 2.1E-17 99.6 8.3 103 167-273 5-107 (117)
79 KOG4214 Myotrophin and similar 99.3 4.4E-12 9.5E-17 96.0 7.9 97 200-299 4-100 (117)
80 PF13857 Ank_5: Ankyrin repeat 99.3 1.3E-12 2.8E-17 93.7 4.8 56 217-273 1-56 (56)
81 KOG0515 p53-interacting protei 99.3 4.9E-12 1.1E-16 124.4 9.2 118 26-151 554-673 (752)
82 PF13637 Ank_4: Ankyrin repeat 99.3 6.3E-12 1.4E-16 89.6 6.5 54 22-81 1-54 (54)
83 PF13637 Ank_4: Ankyrin repeat 99.3 1.1E-11 2.4E-16 88.4 6.6 54 198-252 1-54 (54)
84 KOG1710 MYND Zn-finger and ank 99.2 7.6E-11 1.7E-15 107.9 11.0 122 62-186 13-134 (396)
85 KOG0515 p53-interacting protei 99.2 4.8E-11 1E-15 117.5 9.6 116 102-219 556-673 (752)
86 KOG1710 MYND Zn-finger and ank 99.2 1.2E-10 2.6E-15 106.7 11.2 121 130-252 12-132 (396)
87 PTZ00322 6-phosphofructo-2-kin 99.2 6.8E-11 1.5E-15 128.5 11.6 106 132-239 84-195 (664)
88 PF13857 Ank_5: Ankyrin repeat 99.2 1.9E-11 4.1E-16 87.6 4.1 56 183-239 1-56 (56)
89 PTZ00322 6-phosphofructo-2-kin 99.2 1.6E-10 3.5E-15 125.7 11.6 107 166-274 84-196 (664)
90 KOG0506 Glutaminase (contains 98.7 1.3E-08 2.8E-13 99.6 5.4 95 195-290 503-597 (622)
91 KOG0782 Predicted diacylglycer 98.7 5E-08 1.1E-12 97.2 8.8 120 26-152 870-989 (1004)
92 KOG0783 Uncharacterized conser 98.6 2.5E-08 5.4E-13 103.6 4.7 99 145-244 33-131 (1267)
93 KOG0818 GTPase-activating prot 98.6 1.7E-07 3.6E-12 92.3 9.2 86 201-288 136-222 (669)
94 KOG0782 Predicted diacylglycer 98.6 1.8E-07 3.9E-12 93.3 9.4 117 169-287 871-988 (1004)
95 KOG0783 Uncharacterized conser 98.5 1.4E-07 3E-12 98.3 4.7 96 111-207 33-128 (1267)
96 KOG0506 Glutaminase (contains 98.4 2.4E-07 5.2E-12 90.9 5.3 94 161-255 503-596 (622)
97 KOG3609 Receptor-activated Ca2 98.4 0.00039 8.5E-09 74.1 29.2 127 20-157 23-158 (822)
98 KOG0522 Ankyrin repeat protein 98.4 4.5E-07 9.8E-12 90.6 7.0 91 24-120 22-112 (560)
99 PF13606 Ank_3: Ankyrin repeat 98.4 3.8E-07 8.2E-12 55.7 3.8 29 231-260 1-29 (30)
100 KOG0818 GTPase-activating prot 98.4 1.1E-06 2.4E-11 86.7 8.8 86 167-253 136-221 (669)
101 PF00023 Ank: Ankyrin repeat H 98.4 4.5E-07 9.9E-12 57.0 4.0 32 231-263 1-32 (33)
102 KOG0705 GTPase-activating prot 98.3 1.7E-06 3.6E-11 87.0 7.7 90 202-292 628-720 (749)
103 KOG0522 Ankyrin repeat protein 98.3 2.1E-06 4.6E-11 85.9 8.0 89 166-255 22-111 (560)
104 PF13606 Ank_3: Ankyrin repeat 98.3 1.3E-06 2.7E-11 53.4 3.8 24 61-84 2-25 (30)
105 KOG3609 Receptor-activated Ca2 98.2 0.0005 1.1E-08 73.3 23.5 127 59-193 23-160 (822)
106 PF00023 Ank: Ankyrin repeat H 98.2 3.1E-06 6.7E-11 53.1 4.3 32 197-229 1-32 (33)
107 KOG0705 GTPase-activating prot 98.0 1.4E-05 2.9E-10 80.7 7.9 87 168-255 628-717 (749)
108 KOG0511 Ankyrin repeat protein 98.0 8.5E-06 1.9E-10 78.0 5.8 76 23-107 37-112 (516)
109 KOG0520 Uncharacterized conser 97.9 7.9E-06 1.7E-10 88.4 4.7 129 159-289 569-703 (975)
110 KOG2384 Major histocompatibili 97.8 5.9E-05 1.3E-09 65.8 7.2 70 223-292 3-72 (223)
111 KOG0521 Putative GTPase activa 97.8 2E-05 4.4E-10 85.8 5.1 91 196-288 654-744 (785)
112 KOG0520 Uncharacterized conser 97.6 7.4E-05 1.6E-09 81.1 6.1 125 92-217 570-699 (975)
113 KOG2384 Major histocompatibili 97.5 0.00024 5.2E-09 62.1 6.3 67 54-121 5-71 (223)
114 KOG0511 Ankyrin repeat protein 97.4 0.00024 5.2E-09 68.4 6.1 73 64-140 39-111 (516)
115 KOG0521 Putative GTPase activa 97.4 0.00015 3.2E-09 79.3 4.6 90 59-151 654-743 (785)
116 KOG2505 Ankyrin repeat protein 96.5 0.016 3.5E-07 58.2 9.4 64 209-274 402-471 (591)
117 smart00248 ANK ankyrin repeats 95.6 0.017 3.6E-07 33.6 3.2 25 22-46 2-26 (30)
118 smart00248 ANK ankyrin repeats 95.5 0.025 5.5E-07 32.8 3.8 24 232-255 2-25 (30)
119 PF06128 Shigella_OspC: Shigel 95.1 0.14 3E-06 46.6 8.5 116 167-292 156-280 (284)
120 PF03158 DUF249: Multigene fam 94.7 0.39 8.4E-06 42.5 10.1 136 64-218 49-190 (192)
121 PF03158 DUF249: Multigene fam 94.0 0.76 1.6E-05 40.7 10.3 136 100-253 50-191 (192)
122 KOG2505 Ankyrin repeat protein 93.5 0.088 1.9E-06 53.2 4.3 41 62-104 431-471 (591)
123 PF06128 Shigella_OspC: Shigel 92.0 1.4 3.1E-05 40.2 9.4 120 99-256 156-278 (284)
124 PF11929 DUF3447: Domain of un 89.6 0.86 1.9E-05 34.5 5.1 47 24-83 8-54 (76)
125 cd07920 Pumilio Pumilio-family 89.5 9.6 0.00021 37.8 14.1 230 11-245 10-250 (322)
126 PF11929 DUF3447: Domain of un 86.3 1.9 4.1E-05 32.6 5.2 48 200-255 8-55 (76)
127 COG4298 Uncharacterized protei 85.8 2.3 5E-05 32.0 5.1 47 401-460 15-61 (95)
128 cd07920 Pumilio Pumilio-family 84.6 30 0.00065 34.2 14.5 193 15-212 50-251 (322)
129 TIGR01569 A_tha_TIGR01569 plan 73.7 61 0.0013 28.3 13.3 32 390-421 35-66 (154)
130 KOG4193 G protein-coupled rece 64.6 58 0.0013 35.4 10.7 14 450-463 527-540 (610)
131 PF10966 DUF2768: Protein of u 60.6 9.6 0.00021 26.9 2.6 16 442-457 2-17 (58)
132 PF10011 DUF2254: Predicted me 59.5 1.2E+02 0.0026 30.9 11.5 20 353-372 12-31 (371)
133 PF07344 Amastin: Amastin surf 58.7 58 0.0013 28.4 8.0 57 436-492 63-120 (155)
134 COG2194 Predicted membrane-ass 55.4 1.4E+02 0.003 32.2 11.5 15 481-495 126-140 (555)
135 PF14126 DUF4293: Domain of un 54.6 1.4E+02 0.0031 25.8 12.0 14 352-365 7-20 (149)
136 PF12805 FUSC-like: FUSC-like 52.0 2.2E+02 0.0047 27.6 11.7 32 466-497 70-101 (284)
137 PRK04125 murein hydrolase regu 51.0 1.2E+02 0.0026 26.0 8.2 7 367-373 30-36 (141)
138 PF12273 RCR: Chitin synthesis 51.0 18 0.00038 30.6 3.3 10 466-475 1-10 (130)
139 PF15038 Jiraiya: Jiraiya 50.2 1.9E+02 0.004 25.8 13.9 26 353-378 7-32 (175)
140 COG5522 Predicted integral mem 49.9 1.2E+02 0.0026 27.6 8.3 82 361-462 104-185 (236)
141 PF04535 DUF588: Domain of unk 49.3 1.7E+02 0.0037 25.2 9.7 34 389-422 39-72 (149)
142 COG2322 Predicted membrane pro 48.6 1.9E+02 0.0041 25.4 14.2 23 351-373 12-34 (177)
143 PRK01658 holin-like protein; V 47.6 1.6E+02 0.0034 24.6 8.3 8 367-374 27-34 (122)
144 PF06365 CD34_antigen: CD34/Po 46.0 26 0.00056 32.0 3.7 32 468-499 101-132 (202)
145 TIGR00383 corA magnesium Mg(2+ 45.5 2.1E+02 0.0046 28.1 10.7 61 309-369 217-277 (318)
146 KOG0947 Cytoplasmic exosomal R 44.7 22 0.00049 39.9 3.6 21 354-374 655-675 (1248)
147 PF01102 Glycophorin_A: Glycop 43.9 31 0.00067 28.7 3.5 7 487-493 83-89 (122)
148 PRK06638 NADH:ubiquinone oxido 43.5 1.3E+02 0.0029 27.4 8.1 18 400-417 6-23 (198)
149 PF01528 Herpes_glycop: Herpes 42.8 3.8E+02 0.0082 27.2 11.9 22 348-369 209-230 (374)
150 PF11023 DUF2614: Protein of u 41.3 1.5E+02 0.0032 24.2 6.8 28 464-493 34-61 (114)
151 PF03669 UPF0139: Uncharacteri 40.6 1.6E+02 0.0035 23.7 7.1 38 404-458 34-71 (103)
152 COG4325 Predicted membrane pro 40.4 2.1E+02 0.0046 28.8 9.1 26 351-376 36-61 (464)
153 PRK11598 putative metal depend 40.2 3E+02 0.0064 29.7 11.2 14 359-372 17-30 (545)
154 PF01578 Cytochrom_C_asm: Cyto 40.1 3E+02 0.0064 25.2 10.2 22 478-499 85-106 (214)
155 KOG2417 Predicted G-protein co 39.6 2E+02 0.0043 28.6 8.7 37 395-431 37-73 (462)
156 PF15050 SCIMP: SCIMP protein 37.6 36 0.00078 27.8 2.9 24 474-497 13-36 (133)
157 PRK10582 cytochrome o ubiquino 36.3 2.4E+02 0.0052 23.0 9.1 18 407-424 19-36 (109)
158 PF06011 TRP: Transient recept 35.8 1.7E+02 0.0037 30.4 8.6 23 465-487 384-406 (438)
159 KOG4591 Uncharacterized conser 35.5 28 0.00062 31.3 2.2 47 230-276 220-270 (280)
160 KOG3788 Predicted divalent cat 35.4 2.2E+02 0.0047 29.0 8.4 23 354-376 119-141 (441)
161 PF14851 FAM176: FAM176 family 35.4 1.2E+02 0.0025 26.5 5.8 13 484-496 35-47 (153)
162 PF15176 LRR19-TM: Leucine-ric 35.0 90 0.002 24.8 4.6 25 482-506 28-52 (102)
163 KOG2927 Membrane component of 34.9 37 0.00081 33.5 3.1 14 395-408 184-197 (372)
164 MTH00057 ND6 NADH dehydrogenas 34.4 2.2E+02 0.0047 25.8 7.8 17 401-417 4-20 (186)
165 PF10966 DUF2768: Protein of u 34.2 1.7E+02 0.0037 20.8 5.4 37 423-461 19-55 (58)
166 cd02433 Nodulin-21_like_2 Nodu 34.2 2.9E+02 0.0063 26.0 8.9 8 464-471 206-213 (234)
167 PF04053 Coatomer_WDAD: Coatom 34.0 1.3E+02 0.0029 31.3 7.2 105 132-254 323-428 (443)
168 PTZ00370 STEVOR; Provisional 33.8 74 0.0016 30.6 4.8 17 351-367 177-193 (296)
169 KOG0513 Ca2+-independent phosp 32.8 9.3 0.0002 40.2 -1.4 26 55-80 49-74 (503)
170 PF06645 SPC12: Microsomal sig 32.7 1.8E+02 0.0039 21.9 5.9 15 444-458 20-34 (76)
171 MTH00213 ND6 NADH dehydrogenas 32.4 1.1E+02 0.0023 28.0 5.2 13 475-487 58-70 (239)
172 PF06166 DUF979: Protein of un 32.3 4.9E+02 0.011 25.4 13.8 28 458-485 191-218 (308)
173 KOG4591 Uncharacterized conser 32.1 22 0.00049 31.9 1.0 47 60-106 221-270 (280)
174 PF11395 DUF2873: Protein of u 32.0 1E+02 0.0022 19.4 3.5 22 470-491 9-30 (43)
175 COG0598 CorA Mg2+ and Co2+ tra 32.0 4.6E+02 0.0099 25.9 10.5 67 303-369 215-281 (322)
176 KOG3882 Tetraspanin family int 31.3 1.5E+02 0.0033 27.7 6.8 59 402-460 13-75 (237)
177 PRK09546 zntB zinc transporter 31.3 5.1E+02 0.011 25.6 10.8 27 343-369 257-283 (324)
178 PHA03237 envelope glycoprotein 31.1 6.1E+02 0.013 26.2 12.2 22 348-369 226-247 (424)
179 PF04277 OAD_gamma: Oxaloaceta 30.8 1.2E+02 0.0026 22.8 4.9 6 475-480 12-17 (79)
180 KOG0054 Multidrug resistance-a 30.7 6.3E+02 0.014 30.7 12.5 43 471-513 952-994 (1381)
181 PF13903 Claudin_2: PMP-22/EMP 30.5 3.2E+02 0.0069 23.6 8.4 26 441-466 74-99 (172)
182 PF03188 Cytochrom_B561: Eukar 30.5 3.2E+02 0.007 22.8 10.3 22 440-461 40-61 (137)
183 PF01544 CorA: CorA-like Mg2+ 30.4 64 0.0014 31.1 4.1 57 436-494 232-292 (292)
184 COG2246 Predicted membrane pro 30.2 3.3E+02 0.0072 23.2 7.9 28 402-429 42-69 (139)
185 PRK01821 hypothetical protein; 30.1 3.4E+02 0.0074 23.0 8.2 9 366-374 31-39 (133)
186 PF09726 Macoilin: Transmembra 30.0 50 0.0011 36.6 3.5 20 472-491 156-175 (697)
187 PRK10692 hypothetical protein; 29.9 2.6E+02 0.0057 21.6 7.0 30 434-463 6-35 (92)
188 PF13994 PgaD: PgaD-like prote 29.5 3.3E+02 0.0071 23.2 7.8 31 432-462 14-44 (138)
189 KOG3030 Lipid phosphate phosph 29.4 3.9E+02 0.0085 26.4 9.2 48 443-490 216-263 (317)
190 KOG4112 Signal peptidase subun 29.3 2.8E+02 0.0061 21.7 7.0 17 441-457 32-48 (101)
191 PHA03239 envelope glycoprotein 29.1 6.6E+02 0.014 26.0 12.0 22 348-369 232-253 (429)
192 PF10812 DUF2561: Protein of u 29.0 1.9E+02 0.0041 26.2 6.2 48 440-487 29-84 (207)
193 PF06703 SPC25: Microsomal sig 28.5 2.4E+02 0.0052 24.7 7.1 30 461-490 50-79 (162)
194 PLN03081 pentatricopeptide (PP 28.1 6.4E+02 0.014 28.0 12.0 22 24-45 264-285 (697)
195 PF05313 Pox_P21: Poxvirus P21 27.8 3.6E+02 0.0078 24.1 7.6 110 399-515 68-186 (189)
196 KOG0513 Ca2+-independent phosp 27.3 13 0.00029 39.1 -1.4 72 196-278 134-205 (503)
197 PF04053 Coatomer_WDAD: Coatom 27.1 86 0.0019 32.7 4.5 161 100-290 268-430 (443)
198 COG3833 MalG ABC-type maltose 26.7 4.8E+02 0.01 25.1 8.8 33 466-498 143-175 (282)
199 CHL00016 ndhG NADH dehydrogena 26.7 3.2E+02 0.0069 24.5 7.6 14 401-414 11-24 (182)
200 PF05624 LSR: Lipolysis stimul 26.3 49 0.0011 21.9 1.6 20 467-486 2-21 (49)
201 PRK12585 putative monovalent c 26.0 5E+02 0.011 23.5 8.7 10 500-509 106-115 (197)
202 PF12304 BCLP: Beta-casein lik 25.9 1.4E+02 0.003 26.7 4.7 29 401-429 39-68 (188)
203 COG0598 CorA Mg2+ and Co2+ tra 25.8 6.5E+02 0.014 24.9 10.4 25 436-460 260-284 (322)
204 PF14145 YrhK: YrhK-like prote 25.2 1.8E+02 0.004 20.7 4.5 36 447-482 13-48 (59)
205 PRK15204 undecaprenyl-phosphat 25.0 5.4E+02 0.012 27.2 10.1 21 401-421 16-36 (476)
206 PF04304 DUF454: Protein of un 24.8 2E+02 0.0042 21.1 4.9 27 437-463 24-50 (71)
207 COG1380 Putative effector of m 24.7 4.2E+02 0.0092 22.3 7.6 12 363-374 24-35 (128)
208 PF06024 DUF912: Nucleopolyhed 24.5 41 0.00088 27.0 1.2 25 468-492 62-86 (101)
209 PRK00733 hppA membrane-bound p 24.1 2E+02 0.0043 31.4 6.5 74 406-485 243-319 (666)
210 PF02932 Neur_chan_memb: Neuro 23.9 3.2E+02 0.007 24.1 7.5 11 453-463 40-50 (237)
211 KOG2049 Translational represso 23.8 4.2E+02 0.0091 28.3 8.7 19 203-221 441-459 (536)
212 PRK10755 sensor protein BasS/P 23.7 2.6E+02 0.0057 27.7 7.3 8 486-493 76-83 (356)
213 PF08113 CoxIIa: Cytochrome c 23.5 1.9E+02 0.0042 17.8 4.1 18 470-487 10-27 (34)
214 PF08374 Protocadherin: Protoc 23.1 60 0.0013 29.7 2.1 25 466-490 35-59 (221)
215 PF02009 Rifin_STEVOR: Rifin/s 22.9 1.5E+02 0.0033 29.0 5.0 19 479-497 266-284 (299)
216 PRK11085 magnesium/nickel/coba 22.8 7.5E+02 0.016 24.5 10.5 58 312-369 218-275 (316)
217 KOG0292 Vesicle coat complex C 22.7 2.2E+02 0.0049 32.0 6.5 98 65-187 600-698 (1202)
218 TIGR00383 corA magnesium Mg(2+ 22.5 5.1E+02 0.011 25.4 9.0 23 437-459 257-279 (318)
219 PF11674 DUF3270: Protein of u 22.4 3.1E+02 0.0066 21.5 5.6 12 402-413 40-51 (90)
220 TIGR01478 STEVOR variant surfa 22.3 1.4E+02 0.0031 28.7 4.5 17 351-367 177-193 (295)
221 COG3125 CyoD Heme/copper-type 22.1 4.4E+02 0.0095 21.5 9.0 18 407-424 21-38 (111)
222 COG1086 Predicted nucleoside-d 22.1 4.7E+02 0.01 28.1 8.6 16 403-418 3-18 (588)
223 PF05297 Herpes_LMP1: Herpesvi 21.7 31 0.00066 32.9 0.0 8 398-405 20-27 (381)
224 PF07857 DUF1632: CEO family ( 21.7 7.1E+02 0.015 23.8 9.8 21 355-375 2-22 (254)
225 PF09928 DUF2160: Predicted sm 21.4 1.3E+02 0.0027 23.3 3.2 27 449-475 53-79 (88)
226 PF10321 7TM_GPCR_Srt: Serpent 21.1 5.3E+02 0.011 25.5 8.5 27 352-378 150-176 (313)
227 PF11241 DUF3043: Protein of u 21.0 3.6E+02 0.0077 24.0 6.4 8 444-451 84-91 (170)
228 PF01988 VIT1: VIT family; In 20.9 6.6E+02 0.014 23.1 10.0 8 364-371 118-125 (213)
229 KOG1226 Integrin beta subunit 20.7 1E+02 0.0022 33.9 3.6 45 462-506 708-752 (783)
230 PF07214 DUF1418: Protein of u 20.5 4.4E+02 0.0095 20.9 6.1 46 444-489 17-65 (96)
231 KOG4812 Golgi-associated prote 20.4 1E+02 0.0022 28.7 3.0 17 465-481 222-238 (262)
No 1
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=5.8e-38 Score=319.08 Aligned_cols=275 Identities=28% Similarity=0.401 Sum_probs=234.4
Q ss_pred cccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCccccccc
Q 009344 13 MTKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIK 92 (537)
Q Consensus 13 ~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~ 92 (537)
.+.+.++..+.+|||.|+..|+.+..+.|++.+.+ ++..++.|.||||+||..++.|..+.|++.+ +++...
T Consensus 112 ad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~d------vnl~de~~~TpLh~A~~~~~~E~~k~Li~~~--a~~~K~ 183 (929)
T KOG0510|consen 112 ADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGAD------VNLEDENGFTPLHLAARKNKVEAKKELINKG--ADPCKS 183 (929)
T ss_pred CCCChhhhhccCchhhccccchHHHHHHHHHhcCC------ccccccCCCchhhHHHhcChHHHHHHHHhcC--CCCCcc
Confidence 44566677777777777777777777777777655 6777888899999999999999778888877 788888
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHh-----cCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCc-----------
Q 009344 93 ARNGFDAFHIAAKEGHLEVLKVLLA-----VYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSL----------- 156 (537)
Q Consensus 93 ~~~g~t~Lh~A~~~g~~~iv~~Ll~-----~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~----------- 156 (537)
|.+|+.|+|.|+++|..|..+.++. +...++. .+..+.||||.|+..|+.++++.+|+.+...
T Consensus 184 ~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~-~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~ 262 (929)
T KOG0510|consen 184 DIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINF-DNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQE 262 (929)
T ss_pred cCcCCchHHHHHHhcchhhhhhhhccccchhhccccc-ccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHH
Confidence 8889999999999999998888887 3333333 3778899999999999999999999986553
Q ss_pred ---ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHH-hCCCCccccCCCC
Q 009344 157 ---ITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIK-AEPASVNMVDTKG 232 (537)
Q Consensus 157 ---~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~-~~~~~i~~~d~~G 232 (537)
.+..|.+|.||||+|++.|+.+.++.|+..|+++... +.++.||||.||.+|+.+.++.||+ .+...+|..|..|
T Consensus 263 kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~k-n~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g 341 (929)
T KOG0510|consen 263 KELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSK-NKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHG 341 (929)
T ss_pred HHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccccc-CCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccC
Confidence 2345889999999999999999999999999998765 8999999999999999999999999 6667899999999
Q ss_pred ChHHHHHHHhCCHHHHHHHHhcCCCCcc--cCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcC
Q 009344 233 NSPLHIATRKGREQIVRLLLANSETNLN--GVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMK 297 (537)
Q Consensus 233 ~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~--~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~ 297 (537)
+||||+|++.|+.+++++|+.+|....+ ..|.+|+||||+|+..|+..+++.|+.+|++....++
T Consensus 342 ~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~ 408 (929)
T KOG0510|consen 342 MTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNK 408 (929)
T ss_pred CCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccc
Confidence 9999999999999999999999944444 5699999999999999999999999999999855433
No 2
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2e-38 Score=335.15 Aligned_cols=268 Identities=25% Similarity=0.318 Sum_probs=249.3
Q ss_pred ccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHH-----HHHcCCHHHHHHHHHcCCccc
Q 009344 14 TKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYV-----AAEYGHVDLVAEMIKCYDLAD 88 (537)
Q Consensus 14 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~-----A~~~g~~~iv~~Ll~~~~~~~ 88 (537)
.....+..+.||||.|++.|+.++|+.|++.|.+ ++..+..|.||||+ |+..|+.+++++|++.+ ++
T Consensus 27 ~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~------~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~g--a~ 98 (480)
T PHA03100 27 LNDYSYKKPVLPLYLAKEARNIDVVKILLDNGAD------INSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG--AN 98 (480)
T ss_pred cchhhhcccchhhhhhhccCCHHHHHHHHHcCCC------CCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCC--CC
Confidence 3455678899999999999999999999999876 66778889999999 99999999999999987 77
Q ss_pred ccccCCCCChHHHHHH--HcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCcccccCCCC
Q 009344 89 AGIKARNGFDAFHIAA--KEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQG--HVEVLNFLIEAESSLITISRSNG 164 (537)
Q Consensus 89 ~~~~~~~g~t~Lh~A~--~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~g 164 (537)
++..+..|.||||+|+ ..|+.+++++|++.++++... +..|.||||+|+..| +.+++++|+++|++ .+..+..|
T Consensus 99 i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~d-in~~d~~g 176 (480)
T PHA03100 99 VNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIK-NSDGENLLHLYLESNKIDLKILKLLIDKGVD-INAKNRYG 176 (480)
T ss_pred CCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCcc-CCCCCcHHHHHHHcCCChHHHHHHHHHCCCC-cccccCCC
Confidence 7889999999999999 999999999999999987654 889999999999999 99999999999998 56778899
Q ss_pred CcHHHHHHHcCcHHHHHHHHhcCCccccccCCCC------chHHHHHHhCCC--HHHHHHHHHhCCCCccccCCCCChHH
Q 009344 165 KTALHSAARNGRLEVLKTLLAADSVIAIRTDKKG------QTALHMAVKGQN--IEVVQELIKAEPASVNMVDTKGNSPL 236 (537)
Q Consensus 165 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g------~t~Lh~A~~~g~--~~~v~~Ll~~~~~~i~~~d~~G~t~L 236 (537)
.||||+|+..|+.+++++|++++++.... +..| .||||.|+..|+ .+++++|++.| ++++.+|..|+|||
T Consensus 177 ~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g-~din~~d~~g~TpL 254 (480)
T PHA03100 177 YTPLHIAVEKGNIDVIKFLLDNGADINAG-DIETLLFTIFETPLHIAACYNEITLEVVNYLLSYG-VPINIKDVYGFTPL 254 (480)
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCCccCC-CCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcC-CCCCCCCCCCCCHH
Confidence 99999999999999999999999887755 6677 899999999999 99999999987 99999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhh
Q 009344 237 HIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAK 294 (537)
Q Consensus 237 h~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~ 294 (537)
|+|+..++.+++++|++.| ++++.+|..|.||+++|+..++.+++++|+++|++...
T Consensus 255 ~~A~~~~~~~iv~~Ll~~g-ad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~ 311 (480)
T PHA03100 255 HYAVYNNNPEFVKYLLDLG-ANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 311 (480)
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHH
Confidence 9999999999999999998 79999999999999999999999999999999987653
No 3
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1e-37 Score=324.49 Aligned_cols=266 Identities=24% Similarity=0.322 Sum_probs=237.6
Q ss_pred ccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCc-------
Q 009344 14 TKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDL------- 86 (537)
Q Consensus 14 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~------- 86 (537)
..+..+..|.||||.|++.|+.++|++|++.|++ ++..+..|.||||.|+..|+.+++++|++.+..
T Consensus 27 ~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~------~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~ 100 (434)
T PHA02874 27 CINISVDETTTPLIDAIRSGDAKIVELFIKHGAD------INHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIP 100 (434)
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhc
Confidence 3556778899999999999999999999999876 677888999999999999999999999987632
Q ss_pred --------------ccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHc
Q 009344 87 --------------ADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEA 152 (537)
Q Consensus 87 --------------~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ 152 (537)
.+++.++..|.||||+|+..|+.+++++|++.+++++.. |..|.||||+|+..|+.+++++|+++
T Consensus 101 ~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~-d~~g~tpLh~A~~~~~~~iv~~Ll~~ 179 (434)
T PHA02874 101 CIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIE-DDNGCYPIHIAIKHNFFDIIKLLLEK 179 (434)
T ss_pred cCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCc-CCCCCCHHHHHHHCCcHHHHHHHHHC
Confidence 345667889999999999999999999999999987754 88999999999999999999999999
Q ss_pred CCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCC
Q 009344 153 ESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKG 232 (537)
Q Consensus 153 ~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G 232 (537)
+.+ .+..+..|.||||+|+..|+.+++++|++.+++.... +..|.||||.|+..+. +.+++|+. + .+++.+|.+|
T Consensus 180 g~~-~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~-~~~g~TpL~~A~~~~~-~~i~~Ll~-~-~~in~~d~~G 254 (434)
T PHA02874 180 GAY-ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNK-CKNGFTPLHNAIIHNR-SAIELLIN-N-ASINDQDIDG 254 (434)
T ss_pred CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCC-CCCCCCHHHHHHHCCh-HHHHHHHc-C-CCCCCcCCCC
Confidence 987 5678899999999999999999999999999887654 8899999999999876 56666663 4 8899999999
Q ss_pred ChHHHHHHHhC-CHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcC-cHHHHHHHHHcChhh
Q 009344 233 NSPLHIATRKG-REQIVRLLLANSETNLNGVNRTGETALDTAEKTG-HSNLAALLREHGVES 292 (537)
Q Consensus 233 ~t~Lh~A~~~~-~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~-~~~i~~~L~~~g~~~ 292 (537)
+||||+|+..+ +.+++++|++++ ++++.+|..|.||||+|++.+ ..++++.|+..+...
T Consensus 255 ~TpLh~A~~~~~~~~iv~~Ll~~g-ad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~ 315 (434)
T PHA02874 255 STPLHHAINPPCDIDIIDILLYHK-ADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLI 315 (434)
T ss_pred CCHHHHHHhcCCcHHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCch
Confidence 99999999876 789999999998 999999999999999999987 677889999887654
No 4
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=7.9e-38 Score=329.78 Aligned_cols=269 Identities=23% Similarity=0.287 Sum_probs=245.5
Q ss_pred ccccccCCCCCCcHhHHHHHcC---CHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcC-CHHHHHHHHHcCCcc
Q 009344 12 KMTKQLTGKRDDTALHSAARAG---NLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYG-HVDLVAEMIKCYDLA 87 (537)
Q Consensus 12 ~~~~~~~~~~g~t~Lh~Aa~~g---~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g-~~~iv~~Ll~~~~~~ 87 (537)
+.+.+.++..|.||||.|+..| +.++++.|++.|++ ++.++..|.||||+|+..| +.+++++|++.+ .
T Consensus 37 ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad------in~~~~~g~TpLh~A~~~~~~~~iv~lLl~~g--a 108 (471)
T PHA03095 37 GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD------VNAPERCGFTPLHLYLYNATTLDVIKLLIKAG--A 108 (471)
T ss_pred CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcC--C
Confidence 4567788999999999999999 99999999999987 7888889999999999999 599999999987 7
Q ss_pred cccccCCCCChHHHHHH--HcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCcccccCCC
Q 009344 88 DAGIKARNGFDAFHIAA--KEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQG--HVEVLNFLIEAESSLITISRSN 163 (537)
Q Consensus 88 ~~~~~~~~g~t~Lh~A~--~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~ 163 (537)
+++.++..|.||||.|+ ..++.++++.|++.++++... |..|.||||+|+..+ +.+++++|++.|.+... .|..
T Consensus 109 ~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~-d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~-~d~~ 186 (471)
T PHA03095 109 DVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNAL-DLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA-VDDR 186 (471)
T ss_pred CCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc-cCCC
Confidence 89999999999999999 556899999999999987754 889999999999876 68999999999998544 4899
Q ss_pred CCcHHHHHHHc--CcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCH--HHHHHHHHhCCCCccccCCCCChHHHHH
Q 009344 164 GKTALHSAARN--GRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNI--EVVQELIKAEPASVNMVDTKGNSPLHIA 239 (537)
Q Consensus 164 g~tpLh~A~~~--g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~--~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A 239 (537)
|.||||+++.. ++.++++.|++.+.++... |..|.||||+|+..|+. .+++.|++.+ .++|.+|..|+||||+|
T Consensus 187 g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~-d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g-~din~~d~~g~TpLh~A 264 (471)
T PHA03095 187 FRSLLHHHLQSFKPRARIVRELIRAGCDPAAT-DMLGNTPLHSMATGSSCKRSLVLPLLIAG-ISINARNRYGQTPLHYA 264 (471)
T ss_pred CCCHHHHHHHHCCCcHHHHHHHHHcCCCCccc-CCCCCCHHHHHHhcCCchHHHHHHHHHcC-CCCCCcCCCCCCHHHHH
Confidence 99999999874 7899999999999987765 99999999999999875 5788888877 99999999999999999
Q ss_pred HHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhh
Q 009344 240 TRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESA 293 (537)
Q Consensus 240 ~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~ 293 (537)
+..|+.+++++|++.| ++++.+|..|.||||+|+..++.++++.|++.+++..
T Consensus 265 ~~~~~~~~v~~LL~~g-ad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~ 317 (471)
T PHA03095 265 AVFNNPRACRRLIALG-ADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE 317 (471)
T ss_pred HHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence 9999999999999998 9999999999999999999999999999999987753
No 5
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=4.4e-37 Score=326.70 Aligned_cols=269 Identities=19% Similarity=0.213 Sum_probs=228.4
Q ss_pred cccccC-CCCCCcHhHHHHH--cCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCC--HHHHHHHHHcCCcc
Q 009344 13 MTKQLT-GKRDDTALHSAAR--AGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGH--VDLVAEMIKCYDLA 87 (537)
Q Consensus 13 ~~~~~~-~~~g~t~Lh~Aa~--~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~--~~iv~~Ll~~~~~~ 87 (537)
.+.+.+ +..|.||||.|+. .|+.++|++|++.|++ ++.+|..|.||||+|+..|+ .++|+.|++.| +
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GAD------VN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~G--A 238 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVN------VNLQNNHLITPLHTYLITGNVCASVIKKIIELG--G 238 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcC--C
Confidence 456666 8899999999865 4689999999999987 78889999999999999995 59999999988 8
Q ss_pred cccccCCCCChHHHHH-------------------------------------HHcCCHHHHHHHHhcCCcccccCCCCC
Q 009344 88 DAGIKARNGFDAFHIA-------------------------------------AKEGHLEVLKVLLAVYPELAMTVDLTN 130 (537)
Q Consensus 88 ~~~~~~~~g~t~Lh~A-------------------------------------~~~g~~~iv~~Ll~~~~~~~~~~d~~g 130 (537)
+++.++..|.||||.| +..|+.++++.|++.+++++.. |..|
T Consensus 239 DVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~k-D~~G 317 (764)
T PHA02716 239 DMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYK-DSAG 317 (764)
T ss_pred CCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceecc-CCCC
Confidence 9999999999999965 4457889999999999987755 8899
Q ss_pred ChHHHHHHH--cCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHH--------------cCcHHHHHHHHhcCCcccccc
Q 009344 131 TTALHTAAM--QGHVEVLNFLIEAESSLITISRSNGKTALHSAAR--------------NGRLEVLKTLLAADSVIAIRT 194 (537)
Q Consensus 131 ~t~L~~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~--------------~g~~~~v~~Ll~~~~~~~~~~ 194 (537)
.||||+|+. .++.+++++|++.|++ .+..|..|+||||+|+. .++.++++.|+++|+++...
T Consensus 318 ~TPLH~Aaa~~~~~~eIVklLLe~GAD-IN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~k- 395 (764)
T PHA02716 318 RTCLHQYILRHNISTDIIKLLHEYGND-LNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAV- 395 (764)
T ss_pred CCHHHHHHHHhCCCchHHHHHHHcCCC-CccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCc-
Confidence 999999874 4678999999999988 67889999999999875 37899999999999987654
Q ss_pred CCCCchHHHH----HHhCCCHHHHHHHHHhCC------------------------------------------------
Q 009344 195 DKKGQTALHM----AVKGQNIEVVQELIKAEP------------------------------------------------ 222 (537)
Q Consensus 195 d~~g~t~Lh~----A~~~g~~~~v~~Ll~~~~------------------------------------------------ 222 (537)
|..|+||||. |...++.+++++|+..+.
T Consensus 396 n~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~ 475 (764)
T PHA02716 396 NCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTK 475 (764)
T ss_pred CCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccc
Confidence 8999999994 233567888888876421
Q ss_pred ------------CCccccCCCCChHHHHHHHhCCH-----HHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcH-----H
Q 009344 223 ------------ASVNMVDTKGNSPLHIATRKGRE-----QIVRLLLANSETNLNGVNRTGETALDTAEKTGHS-----N 280 (537)
Q Consensus 223 ------------~~i~~~d~~G~t~Lh~A~~~~~~-----~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~-----~ 280 (537)
.++|..|..|+||||+|+..|+. +++++|++.| +++|.+|++|.||||+|++.|+. +
T Consensus 476 ~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~G-ADIN~~d~~G~TPLh~A~~~g~~~~~~~e 554 (764)
T PHA02716 476 IHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQ-YNINIPTKNGVTPLMLTMRNNRLSGHQWY 554 (764)
T ss_pred cchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCC-CCCcccCCCCCCHHHHHHHcCCccccHHH
Confidence 12355678899999999999876 4569999998 99999999999999999999865 9
Q ss_pred HHHHHHHcChhhh
Q 009344 281 LAALLREHGVESA 293 (537)
Q Consensus 281 i~~~L~~~g~~~~ 293 (537)
+++.|+++|++..
T Consensus 555 Ivk~LL~~ga~~~ 567 (764)
T PHA02716 555 IVKNILDKRPNVD 567 (764)
T ss_pred HHHHHHhcCCCcc
Confidence 9999999987654
No 6
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.1e-36 Score=314.67 Aligned_cols=271 Identities=22% Similarity=0.295 Sum_probs=241.2
Q ss_pred cHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHH
Q 009344 24 TALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIA 103 (537)
Q Consensus 24 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A 103 (537)
..|+.|+..|+++.|+.|++.++. .++..+..|.||||.|+..|+.++|++|++.| .+++..+..|.||||.|
T Consensus 3 ~~l~~ai~~gd~~~v~~ll~~~~~-----~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~G--a~~n~~~~~~~t~L~~A 75 (434)
T PHA02874 3 QDLRMCIYSGDIEAIEKIIKNKGN-----CINISVDETTTPLIDAIRSGDAKIVELFIKHG--ADINHINTKIPHPLLTA 75 (434)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCC-----CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHH
Confidence 468999999999999999986643 26677889999999999999999999999987 78888899999999999
Q ss_pred HHcCCHHHHHHHHhcCCccc----------------------ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccC
Q 009344 104 AKEGHLEVLKVLLAVYPELA----------------------MTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISR 161 (537)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~----------------------~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~ 161 (537)
+..|+.+++++|++.+.+.. ...|..|.||||+|+..|+.+++++|++.+++ .+..|
T Consensus 76 ~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad-~n~~d 154 (434)
T PHA02874 76 IKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-VNIED 154 (434)
T ss_pred HHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCC-CCCcC
Confidence 99999999999999876532 23467899999999999999999999999988 57789
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHH
Q 009344 162 SNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATR 241 (537)
Q Consensus 162 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~ 241 (537)
.+|.||||+|+..|+.+++++|++.+++.... +..|.||||+|+..|+.+++++|++.+ .+++.++..|.||||+|+.
T Consensus 155 ~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g-~~i~~~~~~g~TpL~~A~~ 232 (434)
T PHA02874 155 DNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK-DNNGESPLHNAAEYGDYACIKLLIDHG-NHIMNKCKNGFTPLHNAII 232 (434)
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCcCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999877654 889999999999999999999999988 8899999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcC-cHHHHHHHHHcChhhhhhcCCCCCchHHHH
Q 009344 242 KGREQIVRLLLANSETNLNGVNRTGETALDTAEKTG-HSNLAALLREHGVESAKNMKPQNNPARELK 307 (537)
Q Consensus 242 ~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~-~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~ 307 (537)
.+. +.+.+|+ .+ ++++.+|..|.||||+|+..+ +.+++++|+++|++.......+.+|.....
T Consensus 233 ~~~-~~i~~Ll-~~-~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~ 296 (434)
T PHA02874 233 HNR-SAIELLI-NN-ASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAF 296 (434)
T ss_pred CCh-HHHHHHH-cC-CCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 875 5666666 34 789999999999999999875 789999999999999888888887765543
No 7
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=313.40 Aligned_cols=256 Identities=17% Similarity=0.232 Sum_probs=157.6
Q ss_pred CCcHhHHHHH--cCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChH
Q 009344 22 DDTALHSAAR--AGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDA 99 (537)
Q Consensus 22 g~t~Lh~Aa~--~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~ 99 (537)
+.++||.++. .++.++|+.|++.|++ ++.+|..|.||||+|+..|+.++|++|++++ ++++.+|.+|.||
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gad------vn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~G--Adin~~d~~g~Tp 108 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYS------PNETDDDGNYPLHIASKINNNRIVAMLLTHG--ADPNACDKQHKTP 108 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHCc--CCCCCCCCCCCCH
Confidence 3566666553 3355666666666655 5556666677777777777777777776655 5666666666777
Q ss_pred HHHHHHcC--CHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC--
Q 009344 100 FHIAAKEG--HLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNG-- 175 (537)
Q Consensus 100 Lh~A~~~g--~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g-- 175 (537)
||+|+..+ +.++++.|++++++++...|..|.|||| |+..|+.++++.|++.+.+ .+..|..|+||||+|+..+
T Consensus 109 Lh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad-~~~~d~~G~t~Lh~A~~~~~~ 186 (446)
T PHA02946 109 LYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFE-ARIVDKFGKNHIHRHLMSDNP 186 (446)
T ss_pred HHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccc-ccccCCCCCCHHHHHHHhcCC
Confidence 77666544 3566666666666666545666666665 4445666666666666655 4556666666666665533
Q ss_pred cHHHHHHHHhcCCccccccCCCCchHHHHHHhCC--CHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCC-HHHHHHHH
Q 009344 176 RLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQ--NIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGR-EQIVRLLL 252 (537)
Q Consensus 176 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~-~~iv~~Ll 252 (537)
+.+++++|++.++++... |..|.||||+|+.++ +.+++++|+. + +++|.+|.+|+||||+|+..++ .+++++|+
T Consensus 187 ~~~~v~~Ll~~Gadin~~-d~~G~TpLH~Aa~~~~~~~~iv~lLl~-g-adin~~d~~G~TpLh~A~~~~~~~~~~~~Ll 263 (446)
T PHA02946 187 KASTISWMMKLGISPSKP-DHDGNTPLHIVCSKTVKNVDIINLLLP-S-TDVNKQNKFGDSPLTLLIKTLSPAHLINKLL 263 (446)
T ss_pred CHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCCcHHHHHHHHc-C-CCCCCCCCCCCCHHHHHHHhCChHHHHHHHH
Confidence 346666666666665543 666666777666654 5666666663 3 6666666666677766666665 35666666
Q ss_pred hcCCCC-------------------cccC-CCCCCCHHHHHHHcCcHHHHHHHHHcCh
Q 009344 253 ANSETN-------------------LNGV-NRTGETALDTAEKTGHSNLAALLREHGV 290 (537)
Q Consensus 253 ~~~~~~-------------------~~~~-d~~g~T~L~~A~~~~~~~i~~~L~~~g~ 290 (537)
+++... ++.. +..|.||||+|+..|+.+++++|+++|+
T Consensus 264 ~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~ 321 (446)
T PHA02946 264 STSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI 321 (446)
T ss_pred hCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 654210 1111 1235566666666666666666666654
No 8
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.2e-36 Score=330.43 Aligned_cols=285 Identities=19% Similarity=0.194 Sum_probs=249.8
Q ss_pred cccccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCc----
Q 009344 11 KKMTKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDL---- 86 (537)
Q Consensus 11 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~---- 86 (537)
...+.+.+|..|.||||+||+.|+.++|++|++.|++ ++..+..|.||||.|+..|+.+++++|++.+..
T Consensus 167 ~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad------~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~ 240 (682)
T PHA02876 167 GGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGAD------VNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKN 240 (682)
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC------cCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCC
Confidence 3456777899999999999999999999999999987 566788999999999999999999988875421
Q ss_pred -----------------------ccccccCCCCChHHHHHHHcCCH-HHHHHHHhcCCcccccCCCCCChHHHHHHHcC-
Q 009344 87 -----------------------ADAGIKARNGFDAFHIAAKEGHL-EVLKVLLAVYPELAMTVDLTNTTALHTAAMQG- 141 (537)
Q Consensus 87 -----------------------~~~~~~~~~g~t~Lh~A~~~g~~-~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g- 141 (537)
.+.+..+..|.||||+|+..|+. ++++.|++.+.+.... |..|.||||+|+..|
T Consensus 241 ~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~-d~~g~TpLh~Aa~~g~ 319 (682)
T PHA02876 241 DLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAK-NIKGETPLYLMAKNGY 319 (682)
T ss_pred cHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhCC
Confidence 24556677899999999999986 6899999999887654 889999999999999
Q ss_pred CHHHHHHHHHcCCCcccccCCCCCcHHHHHHHc-CcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHh
Q 009344 142 HVEVLNFLIEAESSLITISRSNGKTALHSAARN-GRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKA 220 (537)
Q Consensus 142 ~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 220 (537)
+.++++.|+..+.+ .+..|..|.||||+|+.. ++.++++.|++.+.++... |..|.||||+|+..|+.+++++|++.
T Consensus 320 ~~~~v~~Ll~~gad-in~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~-d~~G~TpLh~Aa~~~~~~iv~~Ll~~ 397 (682)
T PHA02876 320 DTENIRTLIMLGAD-VNAADRLYITPLHQASTLDRNKDIVITLLELGANVNAR-DYCDKTPIHYAAVRNNVVIINTLLDY 397 (682)
T ss_pred CHHHHHHHHHcCCC-CCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccC-CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 59999999999988 577889999999999985 5788999999999887755 89999999999999999999999998
Q ss_pred CCCCccccCCCCChHHHHHHHhCC-HHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcC-cHHHHHHHHHcChhhhhhcCC
Q 009344 221 EPASVNMVDTKGNSPLHIATRKGR-EQIVRLLLANSETNLNGVNRTGETALDTAEKTG-HSNLAALLREHGVESAKNMKP 298 (537)
Q Consensus 221 ~~~~i~~~d~~G~t~Lh~A~~~~~-~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~-~~~i~~~L~~~g~~~~~~~~~ 298 (537)
+ ++++..+..|.||||+|+..++ ..++++|++.| +++|.+|..|+||||+|+..+ +.+++++|+++|++.......
T Consensus 398 g-ad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~g-adin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~ 475 (682)
T PHA02876 398 G-ADIEALSQKIGTALHFALCGTNPYMSVKTLIDRG-ANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQ 475 (682)
T ss_pred C-CCccccCCCCCchHHHHHHcCCHHHHHHHHHhCC-CCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCC
Confidence 7 8999999999999999998766 46789999888 899999999999999999876 689999999999999888887
Q ss_pred CCCchHHH
Q 009344 299 QNNPAREL 306 (537)
Q Consensus 299 ~~~~~~~~ 306 (537)
+.+|....
T Consensus 476 g~tpl~~a 483 (682)
T PHA02876 476 NQYPLLIA 483 (682)
T ss_pred CCCHHHHH
Confidence 77776543
No 9
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=6.7e-36 Score=308.78 Aligned_cols=270 Identities=16% Similarity=0.214 Sum_probs=231.1
Q ss_pred cccccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcC--CHHHHHHHHHcCCccc
Q 009344 11 KKMTKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYG--HVDLVAEMIKCYDLAD 88 (537)
Q Consensus 11 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g--~~~iv~~Ll~~~~~~~ 88 (537)
...+.+.+|.+|.||||+|++.|+.++|+.|+++|++ ++.+|..|.||||+|+..+ +.++++.|++.+ ++
T Consensus 61 ~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAd------in~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~G--ad 132 (446)
T PHA02946 61 RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGAD------PNACDKQHKTPLYYLSGTDDEVIERINLLVQYG--AK 132 (446)
T ss_pred CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC------CCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcC--CC
Confidence 3466788999999999999999999999999999977 7788999999999999876 489999999987 67
Q ss_pred ccc-cCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCcccccCCCCC
Q 009344 89 AGI-KARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQG--HVEVLNFLIEAESSLITISRSNGK 165 (537)
Q Consensus 89 ~~~-~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~g~ 165 (537)
++. .+..|.|||| |+..|+.++++.|++.+.+.... |..|.||||+|+..+ +.+++++|++.|.+ ++..|.+|.
T Consensus 133 in~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~-d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gad-in~~d~~G~ 209 (446)
T PHA02946 133 INNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIV-DKFGKNHIHRHLMSDNPKASTISWMMKLGIS-PSKPDHDGN 209 (446)
T ss_pred cccccCCCCCcHHH-HHHCCChHHHHHHHhcccccccc-CCCCCCHHHHHHHhcCCCHHHHHHHHHcCCC-CcccCCCCC
Confidence 764 6889999998 66779999999999999887655 889999999998765 47899999999988 678899999
Q ss_pred cHHHHHHHcC--cHHHHHHHHhcCCccccccCCCCchHHHHHHhCCC-HHHHHHHHHhCCCCc-----------------
Q 009344 166 TALHSAARNG--RLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQN-IEVVQELIKAEPASV----------------- 225 (537)
Q Consensus 166 tpLh~A~~~g--~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~~v~~Ll~~~~~~i----------------- 225 (537)
||||+|+..| +.++++.|++ +.++.. +|..|.||||+|++.++ .++++.|+..+ +.+
T Consensus 210 TpLH~Aa~~~~~~~~iv~lLl~-gadin~-~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g-~~~~~~~~~~a~~~~~~~~~ 286 (446)
T PHA02946 210 TPLHIVCSKTVKNVDIINLLLP-STDVNK-QNKFGDSPLTLLIKTLSPAHLINKLLSTS-NVITDQTVNICIFYDRDDVL 286 (446)
T ss_pred CHHHHHHHcCCCcHHHHHHHHc-CCCCCC-CCCCCCCHHHHHHHhCChHHHHHHHHhCC-CCCCCcHHHHHHHcCchHHH
Confidence 9999999986 8899999985 666554 59999999999999988 58999999876 321
Q ss_pred ---ccc-CCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCC
Q 009344 226 ---NMV-DTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNN 301 (537)
Q Consensus 226 ---~~~-d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~ 301 (537)
+.. +..|+||||+|+..|+.+++++|++++ ..|.||||+|+..++.+++++|+.+|++.... ..+.+
T Consensus 287 e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~--------~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t 357 (446)
T PHA02946 287 EIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDND--------IICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHT 357 (446)
T ss_pred HHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCC--------CccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-ccccc
Confidence 222 235789999999999999999999876 35799999999999999999999999997764 34555
Q ss_pred ch
Q 009344 302 PA 303 (537)
Q Consensus 302 ~~ 303 (537)
+.
T Consensus 358 ~l 359 (446)
T PHA02946 358 CM 359 (446)
T ss_pred HH
Confidence 43
No 10
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=8.5e-36 Score=287.32 Aligned_cols=236 Identities=19% Similarity=0.209 Sum_probs=209.0
Q ss_pred cCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHH
Q 009344 32 AGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEV 111 (537)
Q Consensus 32 ~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~i 111 (537)
.++.+++++|+++++ +.+|..|.||||+|+..|+.++++.|++.+ .+.+.. +|.||||+|+..|+.++
T Consensus 9 ~~~~~~~~~Lis~~a--------~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~g--a~~n~~--d~~TpLh~Aa~~g~~ei 76 (284)
T PHA02791 9 WKSKQLKSFLSSKDA--------FKADVHGHSALYYAIADNNVRLVCTLLNAG--ALKNLL--ENEFPLHQAATLEDTKI 76 (284)
T ss_pred cCHHHHHHHHHhCCC--------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCc--CCCcCC--CCCCHHHHHHHCCCHHH
Confidence 577899999999764 347889999999999999999999999987 455544 47899999999999999
Q ss_pred HHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCC-CcHHHHHHHcCcHHHHHHHHhcCCcc
Q 009344 112 LKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNG-KTALHSAARNGRLEVLKTLLAADSVI 190 (537)
Q Consensus 112 v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g-~tpLh~A~~~g~~~~v~~Ll~~~~~~ 190 (537)
++.|++.+.+.... |..|.||||+|+..|+.+++++|++++++. +..+..| .||||+|+..|+.+++++|+++++..
T Consensus 77 V~lLL~~Gadvn~~-d~~G~TpLh~Aa~~g~~eivk~Ll~~gadi-n~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~ 154 (284)
T PHA02791 77 VKILLFSGMDDSQF-DDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 154 (284)
T ss_pred HHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc
Confidence 99999999887654 889999999999999999999999999884 5567777 48999999999999999999987654
Q ss_pred ccccC-CCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChH-HHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCC
Q 009344 191 AIRTD-KKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSP-LHIATRKGREQIVRLLLANSETNLNGVNRTGET 268 (537)
Q Consensus 191 ~~~~d-~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~-Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T 268 (537)
. | ..|.||||+|+.+|+.+++++|++.+ ++++.+|..|.|| ||+|+..|+.+++++|+++| +++|.+|.+| |
T Consensus 155 ~---d~~~g~TpLh~Aa~~g~~eiv~lLL~~g-Ad~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~G-a~in~~~~~~-~ 228 (284)
T PHA02791 155 F---DLAILLSCIHITIKNGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYD-INIYSVNLEN-V 228 (284)
T ss_pred c---ccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCccCcccC-c
Confidence 2 3 35899999999999999999999987 8999999999987 99999999999999999998 9999999955 6
Q ss_pred HHHHHHHcCcHHHHHHHHHcChhhh
Q 009344 269 ALDTAEKTGHSNLAALLREHGVESA 293 (537)
Q Consensus 269 ~L~~A~~~~~~~i~~~L~~~g~~~~ 293 (537)
+| ++.|++++|+++-++..
T Consensus 229 ~l------~~~e~~~~ll~~~~~~~ 247 (284)
T PHA02791 229 LL------DDAEIAKMIIEKHVEYK 247 (284)
T ss_pred cC------CCHHHHHHHHHhhhhhc
Confidence 66 77899999999888764
No 11
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.5e-35 Score=304.09 Aligned_cols=253 Identities=21% Similarity=0.252 Sum_probs=227.4
Q ss_pred CCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHH
Q 009344 22 DDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFH 101 (537)
Q Consensus 22 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh 101 (537)
++++||.|++.|+.++++.|++.|.+ .+..+..|.||||+|+..|+.++|++|++.+ .+.+..+..+.||||
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~------~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g--a~~~~~~~~~~t~L~ 73 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGIN------PNFEIYDGISPIKLAMKFRDSEAIKLLMKHG--AIPDVKYPDIESELH 73 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCccccCCCcccHHH
Confidence 57899999999999999999999876 5667789999999999999999999999988 677777888999999
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHH
Q 009344 102 IAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLK 181 (537)
Q Consensus 102 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~ 181 (537)
.|+..|+.++++.|++.++......+..|.||||+|+..|+.+++++|++.|++ .+..+.+|.||||+|+..|+.++++
T Consensus 74 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad-~~~~~~~g~tpLh~A~~~~~~~~v~ 152 (413)
T PHA02875 74 DAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGAD-PDIPNTDKFSPLHLAVMMGDIKGIE 152 (413)
T ss_pred HHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999887766677899999999999999999999999988 5778889999999999999999999
Q ss_pred HHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCC-hHHHHHHHhCCHHHHHHHHhcCCCCcc
Q 009344 182 TLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGN-SPLHIATRKGREQIVRLLLANSETNLN 260 (537)
Q Consensus 182 ~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~-t~Lh~A~~~~~~~iv~~Ll~~~~~~~~ 260 (537)
.|++++++.... |..|.||||+|+..|+.+++++|++.| ++++..+..|. ||+|+|+..++.+++++|+++| ++++
T Consensus 153 ~Ll~~g~~~~~~-d~~g~TpL~~A~~~g~~eiv~~Ll~~g-a~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~g-ad~n 229 (413)
T PHA02875 153 LLIDHKACLDIE-DCCGCTPLIIAMAKGDIAICKMLLDSG-ANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRG-ADCN 229 (413)
T ss_pred HHHhcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCC-cCcc
Confidence 999999886654 899999999999999999999999998 89999988875 8999999999999999999998 8887
Q ss_pred cC---CCCCCCHHHHHHHcC---cHHHHHHHH
Q 009344 261 GV---NRTGETALDTAEKTG---HSNLAALLR 286 (537)
Q Consensus 261 ~~---d~~g~T~L~~A~~~~---~~~i~~~L~ 286 (537)
.. +..+.||++.+...+ ..+.++.++
T Consensus 230 ~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li 261 (413)
T PHA02875 230 IMFMIEGEECTILDMICNMCTNLESEAIDALI 261 (413)
T ss_pred hHhhcCCCchHHHHHHHhhcCCcccHHHHHHH
Confidence 65 678999999886543 334454444
No 12
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.5e-36 Score=327.47 Aligned_cols=276 Identities=21% Similarity=0.276 Sum_probs=232.0
Q ss_pred CCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHH----------------------------
Q 009344 18 TGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAA---------------------------- 69 (537)
Q Consensus 18 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~---------------------------- 69 (537)
++..+.||||.|+..|+.|+|+.|++..++ ++...|..|.||||+|+
T Consensus 37 ~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~-----~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 111 (682)
T PHA02876 37 NESIPFTAIHQALQLRQIDIVEEIIQQNPE-----LIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASII 111 (682)
T ss_pred cccccchHHHHHHHHHhhhHHHHHHHhCcc-----cchhhchhhccccccccCCCCccccccccccchhhcccccHHHHH
Confidence 456789999999999999999999998874 35667888999999655
Q ss_pred ------------------------------------------HcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcC
Q 009344 70 ------------------------------------------EYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEG 107 (537)
Q Consensus 70 ------------------------------------------~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g 107 (537)
..|+.+++++|++.| .+++.+|..|.||||+|+..|
T Consensus 112 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~G--advn~~d~~G~TpLh~Aa~~G 189 (682)
T PHA02876 112 LNKHKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGG--ADVNAKDIYCITPIHYAAERG 189 (682)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCC--CCCCCCCCCCCCHHHHHHHCC
Confidence 457788999999987 788889999999999999999
Q ss_pred CHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCc----------------------------ccc
Q 009344 108 HLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSL----------------------------ITI 159 (537)
Q Consensus 108 ~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~----------------------------~~~ 159 (537)
+.+++++|++++++.+.. +..|.||||+|+..|+.++++.|++.+... .+.
T Consensus 190 ~~~iv~~LL~~Gad~n~~-~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~ 268 (682)
T PHA02876 190 NAKMVNLLLSYGADVNII-ALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNS 268 (682)
T ss_pred CHHHHHHHHHCCCCcCcc-CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 999999999999887654 778899999999999888888777654331 344
Q ss_pred cCCCCCcHHHHHHHcCcH-HHHHHHHhcCCccccccCCCCchHHHHHHhCC-CHHHHHHHHHhCCCCccccCCCCChHHH
Q 009344 160 SRSNGKTALHSAARNGRL-EVLKTLLAADSVIAIRTDKKGQTALHMAVKGQ-NIEVVQELIKAEPASVNMVDTKGNSPLH 237 (537)
Q Consensus 160 ~~~~g~tpLh~A~~~g~~-~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g-~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh 237 (537)
.|..|.||||+|+..|+. ++++.|++.+.++... |..|+||||+|+.+| ..++++.|+..+ ++++..|..|+||||
T Consensus 269 ~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~-d~~g~TpLh~Aa~~g~~~~~v~~Ll~~g-adin~~d~~g~TpLh 346 (682)
T PHA02876 269 IDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAK-NIKGETPLYLMAKNGYDTENIRTLIMLG-ADVNAADRLYITPLH 346 (682)
T ss_pred CCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhCCCHHHHHHHHHcC-CCCCCcccCCCcHHH
Confidence 567799999999999886 5888899988876654 888999999999988 588999998887 889999999999999
Q ss_pred HHHHh-CCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCCchH
Q 009344 238 IATRK-GREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNNPAR 304 (537)
Q Consensus 238 ~A~~~-~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~ 304 (537)
+|+.. ++.+++++|++.| ++++.+|..|.||||+|+..++.+++++|+++|++.......+.++..
T Consensus 347 ~A~~~~~~~~iv~lLl~~g-adin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh 413 (682)
T PHA02876 347 QASTLDRNKDIVITLLELG-ANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALH 413 (682)
T ss_pred HHHHhCCcHHHHHHHHHcC-CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHH
Confidence 99885 4678888888887 899999999999999999999999999999999988766665555443
No 13
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=311.13 Aligned_cols=254 Identities=24% Similarity=0.305 Sum_probs=188.0
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCCh
Q 009344 19 GKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFD 98 (537)
Q Consensus 19 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t 98 (537)
+..+.||||.||+.|+.++|+.|++.|++ ++.+|..|.||||+||..|+.+++++|++.+... .. ..+.+
T Consensus 34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gad------vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~--~~--~~~~~ 103 (477)
T PHA02878 34 SLIPFIPLHQAVEARNLDVVKSLLTRGHN------VNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKC--SV--FYTLV 103 (477)
T ss_pred cccCcchHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcc--cc--ccchh
Confidence 45788999999999999999999999876 7788999999999999999999999999976322 22 46788
Q ss_pred HHHHHHHcCCHHHHHHHHhc---------------------------------CCcccccCCCC-CChHHHHHHHcCCHH
Q 009344 99 AFHIAAKEGHLEVLKVLLAV---------------------------------YPELAMTVDLT-NTTALHTAAMQGHVE 144 (537)
Q Consensus 99 ~Lh~A~~~g~~~iv~~Ll~~---------------------------------~~~~~~~~d~~-g~t~L~~A~~~g~~~ 144 (537)
|++.|+..++.++++.|+.. +++++.. |.. |.||||+|+..|+.+
T Consensus 104 ~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~-~~~~g~tpLh~A~~~~~~~ 182 (477)
T PHA02878 104 AIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMK-DRHKGNTALHYATENKDQR 182 (477)
T ss_pred hHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCcc-CCCCCCCHHHHHHhCCCHH
Confidence 99999998887766666544 4443333 334 777777777777777
Q ss_pred HHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhC-CCHHHHHHHHHhCCC
Q 009344 145 VLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKG-QNIEVVQELIKAEPA 223 (537)
Q Consensus 145 iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~-g~~~~v~~Ll~~~~~ 223 (537)
++++|++.|++ .+..|..|.||||.|+..|+.++++.|++.++++... |..|+||||+|+.. ++.+++++|++.+ +
T Consensus 183 iv~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~-d~~g~TpLh~A~~~~~~~~iv~~Ll~~g-a 259 (477)
T PHA02878 183 LTELLLSYGAN-VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR-DKCGNTPLHISVGYCKDYDILKLLLEHG-V 259 (477)
T ss_pred HHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHhcCCHHHHHHHHHcC-C
Confidence 77777777766 4566677777777777777777777777777666543 67777777777754 5677777777766 6
Q ss_pred CccccCC-CCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcC-cHHHHHHHHHcC
Q 009344 224 SVNMVDT-KGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTG-HSNLAALLREHG 289 (537)
Q Consensus 224 ~i~~~d~-~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~-~~~i~~~L~~~g 289 (537)
+++.++. .|+||||+| .++.+++++|+++| +++|..|..|.||||+|+..+ ..++.+.|+..+
T Consensus 260 dvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~g-adin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~ 324 (477)
T PHA02878 260 DVNAKSYILGLTALHSS--IKSERKLKLLLEYG-ADINSLNSYKLTPLSSAVKQYLCINIGRILISNI 324 (477)
T ss_pred CCCccCCCCCCCHHHHH--ccCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHH
Confidence 7776664 677777777 45667777777776 777777777777777777643 345566665544
No 14
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=309.09 Aligned_cols=267 Identities=23% Similarity=0.323 Sum_probs=243.4
Q ss_pred HHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcC---CHHHHHHHHHcCCcccccccCCCCChHHHHH
Q 009344 27 HSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYG---HVDLVAEMIKCYDLADAGIKARNGFDAFHIA 103 (537)
Q Consensus 27 h~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A 103 (537)
..|+..++.++|+.|++.|.+ ++..+..|.||||+|+..| +.++++.|++.| ++++.++..|.||||+|
T Consensus 19 ~~~~~~~~~~~v~~Ll~~ga~------vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~G--adin~~~~~g~TpLh~A 90 (471)
T PHA03095 19 LLNASNVTVEEVRRLLAAGAD------VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAG--ADVNAPERCGFTPLHLY 90 (471)
T ss_pred HHcCCCCCHHHHHHHHHcCCC------cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCC--CCCCCCCCCCCCHHHHH
Confidence 567788999999999999877 7788999999999999999 999999999988 88999999999999999
Q ss_pred HHcC-CHHHHHHHHhcCCcccccCCCCCChHHHHHH--HcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC--cHH
Q 009344 104 AKEG-HLEVLKVLLAVYPELAMTVDLTNTTALHTAA--MQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNG--RLE 178 (537)
Q Consensus 104 ~~~g-~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~--~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g--~~~ 178 (537)
+..| +.+++++|++++.+++.. |..|.||||+|+ ..++.+++++|++.|++ ++..|..|.||||+|+..+ +.+
T Consensus 91 ~~~~~~~~iv~lLl~~ga~in~~-~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad-~~~~d~~g~tpL~~a~~~~~~~~~ 168 (471)
T PHA03095 91 LYNATTLDVIKLLIKAGADVNAK-DKVGRTPLHVYLSGFNINPKVIRLLLRKGAD-VNALDLYGMTPLAVLLKSRNANVE 168 (471)
T ss_pred HHcCCcHHHHHHHHHcCCCCCCC-CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCCCHH
Confidence 9999 599999999999997755 889999999999 55689999999999988 6788999999999998866 689
Q ss_pred HHHHHHhcCCccccccCCCCchHHHHHHhC--CCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCH--HHHHHHHhc
Q 009344 179 VLKTLLAADSVIAIRTDKKGQTALHMAVKG--QNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGRE--QIVRLLLAN 254 (537)
Q Consensus 179 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~--g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~--~iv~~Ll~~ 254 (537)
+++.|++.+++.... |..|+||||+|+.. ++.++++.|++.+ ++++.+|..|+||||+|+..++. .+++.|++.
T Consensus 169 iv~~Ll~~g~~~~~~-d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g-~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~ 246 (471)
T PHA03095 169 LLRLLIDAGADVYAV-DDRFRSLLHHHLQSFKPRARIVRELIRAG-CDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIA 246 (471)
T ss_pred HHHHHHHcCCCCccc-CCCCCCHHHHHHHHCCCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHc
Confidence 999999999998877 99999999999864 7889999999988 99999999999999999999874 578888888
Q ss_pred CCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCCchHHH
Q 009344 255 SETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNNPAREL 306 (537)
Q Consensus 255 ~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~ 306 (537)
+ +++|.+|..|.||||+|+..|+.+++++|+++|++.......+.+|....
T Consensus 247 g-~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A 297 (471)
T PHA03095 247 G-ISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLM 297 (471)
T ss_pred C-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 7 99999999999999999999999999999999999988888887776543
No 15
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=302.60 Aligned_cols=269 Identities=28% Similarity=0.397 Sum_probs=246.7
Q ss_pred cccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCC
Q 009344 15 KQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKAR 94 (537)
Q Consensus 15 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 94 (537)
....|..|+||||+|+.....+.++.|++.|++ ..-.|.++.+|+|+|+..|+.++.+.|++.+ .+++..|.
T Consensus 81 ~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad------~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~--~dvnl~de 152 (929)
T KOG0510|consen 81 SYAKDSADNTPLHAAVEYNQGDKIQVLLSYGAD------TPLRNLNKNAPLHLAADSGNYSCLKLLLDYG--ADVNLEDE 152 (929)
T ss_pred hhhhhcccCchhHHHhhcchHHHHHHHHhcCCC------CChhhhhccCchhhccccchHHHHHHHHHhc--CCcccccc
Confidence 344678899999999999999999999999987 6667889999999999999999999999988 89999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHH-----cCCCcccccCCCCCcHHH
Q 009344 95 NGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIE-----AESSLITISRSNGKTALH 169 (537)
Q Consensus 95 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~-----~~~~~~~~~~~~g~tpLh 169 (537)
.|.||||+|+..++.|..+.|++.+.++... |.+|.+|+|.|+++|..++.+..+. +... ++..+.+|.+|||
T Consensus 153 ~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~-~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~-in~~~n~~~~pLh 230 (929)
T KOG0510|consen 153 NGFTPLHLAARKNKVEAKKELINKGADPCKS-DIDGNFPIHEAARSGSKECMEIFLPEHGYERQTH-INFDNNEKATPLH 230 (929)
T ss_pred CCCchhhHHHhcChHHHHHHHHhcCCCCCcc-cCcCCchHHHHHHhcchhhhhhhhccccchhhcc-cccccCCCCcchh
Confidence 9999999999999999889999999998765 8899999999999999999999998 3344 5778889999999
Q ss_pred HHHHcCcHHHHHHHHhcCCcccc--------------ccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChH
Q 009344 170 SAARNGRLEVLKTLLAADSVIAI--------------RTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSP 235 (537)
Q Consensus 170 ~A~~~g~~~~v~~Ll~~~~~~~~--------------~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~ 235 (537)
.|+..|+.++++.+|+.+..... ..|.+|.||||+|++.|+.+.++.|+..| ++++.+++++.||
T Consensus 231 lAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~G-a~I~~kn~d~~sp 309 (929)
T KOG0510|consen 231 LAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFG-ASINSKNKDEESP 309 (929)
T ss_pred hhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcC-CcccccCCCCCCc
Confidence 99999999999999987654332 24889999999999999999999999998 9999999999999
Q ss_pred HHHHHHhCCHHHHHHHHh-cCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhh
Q 009344 236 LHIATRKGREQIVRLLLA-NSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAK 294 (537)
Q Consensus 236 Lh~A~~~~~~~iv~~Ll~-~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~ 294 (537)
||.|+..|+.+.++.||+ .+....|..|..|.||||+|++.|+..+++.|+++|+....
T Consensus 310 LH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~ 369 (929)
T KOG0510|consen 310 LHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN 369 (929)
T ss_pred hHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhc
Confidence 999999999999999999 66677899999999999999999999999999999998763
No 16
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=302.04 Aligned_cols=266 Identities=18% Similarity=0.221 Sum_probs=228.8
Q ss_pred ccccccCCCCCCcHhHHHHHcC--CHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcC------CHHHHHHHHHc
Q 009344 12 KMTKQLTGKRDDTALHSAARAG--NLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYG------HVDLVAEMIKC 83 (537)
Q Consensus 12 ~~~~~~~~~~g~t~Lh~Aa~~g--~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g------~~~iv~~Ll~~ 83 (537)
..+.+.+ .+|.||||.++..+ +.++|+.|++.|++ ++.++ .+.||||.|+..+ +.++|++|+++
T Consensus 26 GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAd------vn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~ 97 (494)
T PHA02989 26 GFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGAD------VNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKF 97 (494)
T ss_pred CCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCC------ccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHC
Confidence 3455666 57899998766543 68999999999987 44444 5799999998754 57899999998
Q ss_pred CCcccccccCCCCChHHHHHHHc---CCHHHHHHHHhcCCcccccCCCCCChHHHHHHHc--CCHHHHHHHHHcCCCccc
Q 009344 84 YDLADAGIKARNGFDAFHIAAKE---GHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQ--GHVEVLNFLIEAESSLIT 158 (537)
Q Consensus 84 ~~~~~~~~~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~--g~~~iv~~Ll~~~~~~~~ 158 (537)
| ++++.++..|.||||.|+.. |+.+++++|+++|++++...|..|.||||+|+.. ++.+++++|+++|+++..
T Consensus 98 G--adin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~ 175 (494)
T PHA02989 98 G--ADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFE 175 (494)
T ss_pred C--CCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 8 88999999999999988765 6899999999999998545588999999999764 689999999999998644
Q ss_pred ccCCCCCcHHHHHHHcC----cHHHHHHHHhcCCccccccCCCCchHHHHHHhC------CCHHHHHHHHHhCCCCcccc
Q 009344 159 ISRSNGKTALHSAARNG----RLEVLKTLLAADSVIAIRTDKKGQTALHMAVKG------QNIEVVQELIKAEPASVNMV 228 (537)
Q Consensus 159 ~~~~~g~tpLh~A~~~g----~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~------g~~~~v~~Ll~~~~~~i~~~ 228 (537)
..+..|.||||+|+..+ +.+++++|++.|.++... |..|.|+||.++.. +..+++++|++ + +++|.+
T Consensus 176 ~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~-~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~-advn~~ 252 (494)
T PHA02989 176 KTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETN-NNGSESVLESFLDNNKILSKKEFKVLNFILK-Y-IKINKK 252 (494)
T ss_pred cccccCCChHHHHHhcccccccHHHHHHHHhCCCCcccc-CCccccHHHHHHHhchhhcccchHHHHHHHh-C-CCCCCC
Confidence 46788999999998764 899999999999987654 77899999987764 35678887765 5 899999
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChh
Q 009344 229 DTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVE 291 (537)
Q Consensus 229 d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~ 291 (537)
|..|+||||+|+..++.+++++|++.| ++++.+|..|.||||+|+..++.++++.|++.+..
T Consensus 253 d~~G~TpL~~Aa~~~~~~~v~~LL~~G-adin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 253 DKKGFNPLLISAKVDNYEAFNYLLKLG-DDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPG 314 (494)
T ss_pred CCCCCCHHHHHHHhcCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 999999999999999999999999998 99999999999999999999999999999987643
No 17
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=273.90 Aligned_cols=218 Identities=17% Similarity=0.213 Sum_probs=192.8
Q ss_pred ccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCC
Q 009344 16 QLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARN 95 (537)
Q Consensus 16 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 95 (537)
..+|.+|.||||+|+..|+.++++.|++.+++ .+.. .|.||||+|+..|+.++|+.|++.+ .+.+.+|..
T Consensus 24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~------~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~G--advn~~d~~ 93 (284)
T PHA02791 24 FKADVHGHSALYYAIADNNVRLVCTLLNAGAL------KNLL--ENEFPLHQAATLEDTKIVKILLFSG--MDDSQFDDK 93 (284)
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCC------CcCC--CCCCHHHHHHHCCCHHHHHHHHHCC--CCCCCCCCC
Confidence 45789999999999999999999999998865 2222 4789999999999999999999987 788889999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCC-ChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHc
Q 009344 96 GFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTN-TTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARN 174 (537)
Q Consensus 96 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g-~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 174 (537)
|.||||+|+..|+.++++.|++.+++++.. +..| .||||+|+..|+.+++++|++++++... ...|.||||+|+..
T Consensus 94 G~TpLh~Aa~~g~~eivk~Ll~~gadin~~-~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d--~~~g~TpLh~Aa~~ 170 (284)
T PHA02791 94 GNTALYYAVDSGNMQTVKLFVKKNWRLMFY-GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKN 170 (284)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCcc-CCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccc--cccCccHHHHHHHc
Confidence 999999999999999999999999988755 5566 5999999999999999999998765321 13589999999999
Q ss_pred CcHHHHHHHHhcCCccccccCCCCchH-HHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHh
Q 009344 175 GRLEVLKTLLAADSVIAIRTDKKGQTA-LHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLA 253 (537)
Q Consensus 175 g~~~~v~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~ 253 (537)
|+.++++.|+++++++... |..|.|| ||+|+.+|+.+++++|++.+ +++|.+|.+| ++| ++.|++++||+
T Consensus 171 g~~eiv~lLL~~gAd~n~~-d~~g~t~~L~~Aa~~~~~e~v~lLl~~G-a~in~~~~~~-~~l------~~~e~~~~ll~ 241 (284)
T PHA02791 171 GHVDMMILLLDYMTSTNTN-NSLLFIPDIKLAIDNKDLEMLQALFKYD-INIYSVNLEN-VLL------DDAEIAKMIIE 241 (284)
T ss_pred CCHHHHHHHHHCCCCCCcc-cCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCccCcccC-ccC------CCHHHHHHHHH
Confidence 9999999999999987654 7888877 99999999999999999988 9999999955 665 88899999998
Q ss_pred cC
Q 009344 254 NS 255 (537)
Q Consensus 254 ~~ 255 (537)
+.
T Consensus 242 ~~ 243 (284)
T PHA02791 242 KH 243 (284)
T ss_pred hh
Confidence 76
No 18
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=299.64 Aligned_cols=262 Identities=24% Similarity=0.314 Sum_probs=238.9
Q ss_pred cCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHH-----HHHc
Q 009344 32 AGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHI-----AAKE 106 (537)
Q Consensus 32 ~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~-----A~~~ 106 (537)
....++++.+++.+ .+....+..+.||||.|+..|+.++|++|++.| .+++..+..|.||||. |+..
T Consensus 12 ~~~~~~~~~~~~~~------~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g--~~~~~~~~~~~t~L~~~~~~~a~~~ 83 (480)
T PHA03100 12 IIKVKNIKYIIMED------DLNDYSYKKPVLPLYLAKEARNIDVVKILLDNG--ADINSSTKNNSTPLHYLSNIKYNLT 83 (480)
T ss_pred HHHHHHHHHHHhcC------ccchhhhcccchhhhhhhccCCHHHHHHHHHcC--CCCCCccccCcCHHHHHHHHHHHhh
Confidence 34457788888654 235567789999999999999999999999987 7888889999999999 9999
Q ss_pred CCHHHHHHHHhcCCcccccCCCCCChHHHHHH--HcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC--cHHHHHH
Q 009344 107 GHLEVLKVLLAVYPELAMTVDLTNTTALHTAA--MQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNG--RLEVLKT 182 (537)
Q Consensus 107 g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~--~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g--~~~~v~~ 182 (537)
|+.++++.|++.++++. ..|..|.||||+|+ ..|+.+++++|++.|.+ .+..+..|.||||+|+..| +.++++.
T Consensus 84 ~~~~iv~~Ll~~ga~i~-~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~iv~~ 161 (480)
T PHA03100 84 DVKEIVKLLLEYGANVN-APDNNGITPLLYAISKKSNSYSIVEYLLDNGAN-VNIKNSDGENLLHLYLESNKIDLKILKL 161 (480)
T ss_pred chHHHHHHHHHCCCCCC-CCCCCCCchhhHHHhcccChHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCChHHHHHH
Confidence 99999999999999984 55889999999999 99999999999999988 6778899999999999999 9999999
Q ss_pred HHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCC------ChHHHHHHHhCC--HHHHHHHHhc
Q 009344 183 LLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKG------NSPLHIATRKGR--EQIVRLLLAN 254 (537)
Q Consensus 183 Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G------~t~Lh~A~~~~~--~~iv~~Ll~~ 254 (537)
|+++++++... |..|.||||+|+..|+.+++++|++.+ ++++..+..| .||||.|+..++ .+++++|+++
T Consensus 162 Ll~~g~din~~-d~~g~tpL~~A~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~ 239 (480)
T PHA03100 162 LIDKGVDINAK-NRYGYTPLHIAVEKGNIDVIKFLLDNG-ADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSY 239 (480)
T ss_pred HHHCCCCcccc-cCCCCCHHHHHHHhCCHHHHHHHHHcC-CCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHc
Confidence 99999987655 779999999999999999999999988 8999999999 999999999999 9999999999
Q ss_pred CCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCCchHHH
Q 009344 255 SETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNNPAREL 306 (537)
Q Consensus 255 ~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~ 306 (537)
| ++++.+|..|.||||+|+..++.+++++|+++|++.......+.+|....
T Consensus 240 g-~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A 290 (480)
T PHA03100 240 G-VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIA 290 (480)
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH
Confidence 8 99999999999999999999999999999999999888877777776544
No 19
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=292.46 Aligned_cols=229 Identities=23% Similarity=0.316 Sum_probs=212.5
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHc
Q 009344 61 GETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQ 140 (537)
Q Consensus 61 g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~ 140 (537)
++++||.|+..|+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|++.+.+.... +..+.||||.|+..
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g--~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~~~t~L~~A~~~ 78 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIG--INPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVK-YPDIESELHDAVEE 78 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc-CCCcccHHHHHHHC
Confidence 478999999999999999999987 788888899999999999999999999999999876543 67889999999999
Q ss_pred CCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHh
Q 009344 141 GHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKA 220 (537)
Q Consensus 141 g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 220 (537)
|+.++++.|++.+.......+.+|.||||+|+..|+.+++++|++.|+++... +..|.||||+|+..|+.+++++|++.
T Consensus 79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~-~~~g~tpLh~A~~~~~~~~v~~Ll~~ 157 (413)
T PHA02875 79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIP-NTDKFSPLHLAVMMGDIKGIELLIDH 157 (413)
T ss_pred CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999999998876777788999999999999999999999999987654 88999999999999999999999998
Q ss_pred CCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCC-CHHHHHHHcCcHHHHHHHHHcChhhhhh
Q 009344 221 EPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGE-TALDTAEKTGHSNLAALLREHGVESAKN 295 (537)
Q Consensus 221 ~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~-T~L~~A~~~~~~~i~~~L~~~g~~~~~~ 295 (537)
+ .+++.+|..|+||||+|+..|+.+++++|++.| ++++..+..|. ||+|+|+..++.+++++|+++|++....
T Consensus 158 g-~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~g-a~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 158 K-ACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSG-ANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence 7 899999999999999999999999999999998 89999998885 8999999999999999999999987643
No 20
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=2.1e-33 Score=298.71 Aligned_cols=277 Identities=18% Similarity=0.192 Sum_probs=231.2
Q ss_pred CCCCCcHhHHH-----HHcCCHHHHHHHHccC-chhhHhhhcccc-cCCCCCHHHHHHH--cCCHHHHHHHHHcCCcccc
Q 009344 19 GKRDDTALHSA-----ARAGNLDEVKDILTGT-EEAKLKELLPKQ-NQSGETALYVAAE--YGHVDLVAEMIKCYDLADA 89 (537)
Q Consensus 19 ~~~g~t~Lh~A-----a~~g~~~~v~~Ll~~~-~~~~~~~ll~~~-n~~g~TpLh~A~~--~g~~~iv~~Ll~~~~~~~~ 89 (537)
++.+..+++.. .+.++.++|++|++.| ++ ++.. |..|.||||.|+. +++.++|++|++.| +++
T Consensus 134 ~~~d~~~~~~y~~al~~~~v~leiVk~LLe~G~AD------IN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~G--ADV 205 (764)
T PHA02716 134 NNGDMDILYTYFNSPNTRGIDLDLIKYMVDVGIVN------LNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNG--VNV 205 (764)
T ss_pred CcccchHHHHHHhhhcccCCCHHHHHHHHHCCCCC------cccccCCCCCcHHHHHHHhccCCHHHHHHHHHcC--CCC
Confidence 33455555554 4568999999999998 65 6666 8899999999865 46899999999987 899
Q ss_pred cccCCCCChHHHHHHHcCC--HHHHHHHHhcCCcccccCCCCCChHHHHH------------------------------
Q 009344 90 GIKARNGFDAFHIAAKEGH--LEVLKVLLAVYPELAMTVDLTNTTALHTA------------------------------ 137 (537)
Q Consensus 90 ~~~~~~g~t~Lh~A~~~g~--~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A------------------------------ 137 (537)
+.+|..|.||||+|+..|+ .++++.|++.|++++.. |..|.||||+|
T Consensus 206 N~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~k-D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~ 284 (764)
T PHA02716 206 NLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMK-CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMI 284 (764)
T ss_pred CCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhh
Confidence 9999999999999999995 59999999999998765 88999999975
Q ss_pred -------HHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHH--cCcHHHHHHHHhcCCccccccCCCCchHHHHHHh-
Q 009344 138 -------AMQGHVEVLNFLIEAESSLITISRSNGKTALHSAAR--NGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVK- 207 (537)
Q Consensus 138 -------~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~--~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~- 207 (537)
+..|+.++++.|++.|++ .+..|.+|+||||+|+. .++.+++++|++.|+++.. +|..|+||||+|+.
T Consensus 285 L~~~i~AA~~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~-kD~~G~TPLH~A~~~ 362 (764)
T PHA02716 285 LHSYITLARNIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE-PDNIGNTVLHTYLSM 362 (764)
T ss_pred hHHHHHHHHcCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc-CCCCCCCHHHHHHHh
Confidence 345788999999999988 67889999999999864 5689999999999998765 49999999999875
Q ss_pred -------------CCCHHHHHHHHHhCCCCccccCCCCChHHHHH----HHhCCHHHHHHHHhcCC--------------
Q 009344 208 -------------GQNIEVVQELIKAEPASVNMVDTKGNSPLHIA----TRKGREQIVRLLLANSE-------------- 256 (537)
Q Consensus 208 -------------~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A----~~~~~~~iv~~Ll~~~~-------------- 256 (537)
.++.+++++|++.| ++++.+|..|+||||.+ ...++.+++++|++.+.
T Consensus 363 lav~~~ld~~~~~~~~~eVVklLL~~G-ADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~ 441 (764)
T PHA02716 363 LSVVNILDPETDNDIRLDVIQCLISLG-ADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLI 441 (764)
T ss_pred hhhhccccccccccChHHHHHHHHHCC-CCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhh
Confidence 37899999999987 99999999999999942 23467888888877531
Q ss_pred ----------------------------------------------CCcccCCCCCCCHHHHHHHcCcH-----HHHHHH
Q 009344 257 ----------------------------------------------TNLNGVNRTGETALDTAEKTGHS-----NLAALL 285 (537)
Q Consensus 257 ----------------------------------------------~~~~~~d~~g~T~L~~A~~~~~~-----~i~~~L 285 (537)
.++|..|..|.||||+|+..|+. +++++|
T Consensus 442 ~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~L 521 (764)
T PHA02716 442 RVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYL 521 (764)
T ss_pred ccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHH
Confidence 12355688899999999999876 455999
Q ss_pred HHcChhhhhhcCCCCCchHHHH
Q 009344 286 REHGVESAKNMKPQNNPARELK 307 (537)
Q Consensus 286 ~~~g~~~~~~~~~~~~~~~~~~ 307 (537)
++.|++.......+.+|.....
T Consensus 522 L~~GADIN~~d~~G~TPLh~A~ 543 (764)
T PHA02716 522 LSIQYNINIPTKNGVTPLMLTM 543 (764)
T ss_pred HhCCCCCcccCCCCCCHHHHHH
Confidence 9999999999888888866444
No 21
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.5e-34 Score=242.00 Aligned_cols=208 Identities=29% Similarity=0.412 Sum_probs=131.3
Q ss_pred CCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHH
Q 009344 22 DDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFH 101 (537)
Q Consensus 22 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh 101 (537)
+.++.+.+++..-...|+.+++..+. .+....|.+|.||||+||..|+.++|.+|++. +...++.+|..|+||||
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~k----SL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq-~nv~~ddkDdaGWtPlh 77 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPK----SLNARDDQDGRTPLHWACSFGHVEIVYFLLSQ-PNVKPDDKDDAGWTPLH 77 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChh----hhhccccccCCceeeeeeecCchhHHHHHHhc-CCCCCCCccccCCchhh
Confidence 45677777777777777777776552 33333444788888888888888888888762 33556666777777777
Q ss_pred HHHHcCCHHHHHHHHhc-CCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHH
Q 009344 102 IAAKEGHLEVLKVLLAV-YPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVL 180 (537)
Q Consensus 102 ~A~~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v 180 (537)
+|+..|+.++|+.|+.+ +++++.. +..|.|+||||+..|+.+++++|+++++. ++.+|..|.||||-|+..|.++++
T Consensus 78 ia~s~g~~evVk~Ll~r~~advna~-tn~G~T~LHyAagK~r~eIaqlLle~ga~-i~~kD~~~qtplHRAAavGklkvi 155 (226)
T KOG4412|consen 78 IAASNGNDEVVKELLNRSGADVNAT-TNGGQTCLHYAAGKGRLEIAQLLLEKGAL-IRIKDKQGQTPLHRAAAVGKLKVI 155 (226)
T ss_pred hhhhcCcHHHHHHHhcCCCCCccee-cCCCcceehhhhcCChhhHHHHHHhcCCC-CcccccccCchhHHHHhccchhhH
Confidence 77777777777777776 6665544 55667777777777777777777776644 556666666666666666666666
Q ss_pred HHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHH
Q 009344 181 KTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIA 239 (537)
Q Consensus 181 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A 239 (537)
++|+..++..+.. |+.|+||||.|...|+.++...|++.+ ++++..|+.| ||+..|
T Consensus 156 e~Li~~~a~~n~q-Dk~G~TpL~~al~e~~~d~a~lLV~~g-Ad~~~edke~-t~~~~a 211 (226)
T KOG4412|consen 156 EYLISQGAPLNTQ-DKYGFTPLHHALAEGHPDVAVLLVRAG-ADTDREDKEG-TALRIA 211 (226)
T ss_pred HHHHhcCCCCCcc-cccCccHHHHHHhccCchHHHHHHHhc-cceeeccccC-chHHHH
Confidence 6666555443332 555555555554445555555555554 5555555544 554444
No 22
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1e-32 Score=290.40 Aligned_cols=269 Identities=23% Similarity=0.282 Sum_probs=224.4
Q ss_pred hHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHH
Q 009344 26 LHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAK 105 (537)
Q Consensus 26 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~ 105 (537)
|..+...++.+.+...++.-.. .....+..+..+.||||.|+..|+.++|++|++.+ .+++.++..|.||||+|+.
T Consensus 4 ~~~~~~~~~~~~i~~~i~~~~~--~~~~~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~g--advn~~d~~g~TpLh~A~~ 79 (477)
T PHA02878 4 LYKSMYTDNYETILKYIEYIDH--TENYSTSASLIPFIPLHQAVEARNLDVVKSLLTRG--HNVNQPDHRDLTPLHIICK 79 (477)
T ss_pred HHHHHHhccHHHHHHHHHHHhh--hhhhcCcccccCcchHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHH
Confidence 4556666665545555543211 12224556678999999999999999999999987 7889999999999999999
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHH---------------------------------HHHHc
Q 009344 106 EGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLN---------------------------------FLIEA 152 (537)
Q Consensus 106 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~---------------------------------~Ll~~ 152 (537)
.|+.++++.|++.+..... ..+.+|++.|+..++.++++ +|++.
T Consensus 80 ~g~~~~v~~Ll~~~~~~~~---~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~ 156 (477)
T PHA02878 80 EPNKLGMKEMIRSINKCSV---FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSY 156 (477)
T ss_pred CccHhHHHHHHHHHhcccc---ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHc
Confidence 9999999999998755432 46789999999888766554 44455
Q ss_pred CCCcccccCCC-CCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCC
Q 009344 153 ESSLITISRSN-GKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTK 231 (537)
Q Consensus 153 ~~~~~~~~~~~-g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~ 231 (537)
|++ .+..+.+ |.||||+|+..|+.++++.|++.++++.. .|..|.||||.|+..|+.+++++|++.+ ++++.+|..
T Consensus 157 gad-in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~-~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-a~in~~d~~ 233 (477)
T PHA02878 157 GAD-INMKDRHKGNTALHYATENKDQRLTELLLSYGANVNI-PDKTNNSPLHHAVKHYNKPIVHILLENG-ASTDARDKC 233 (477)
T ss_pred CCC-CCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCC
Confidence 555 4555666 99999999999999999999999998765 4899999999999999999999999987 999999999
Q ss_pred CChHHHHHHHh-CCHHHHHHHHhcCCCCcccCCC-CCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCCchHHHH
Q 009344 232 GNSPLHIATRK-GREQIVRLLLANSETNLNGVNR-TGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNNPARELK 307 (537)
Q Consensus 232 G~t~Lh~A~~~-~~~~iv~~Ll~~~~~~~~~~d~-~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~ 307 (537)
|+||||+|+.. ++.+++++|+++| ++++..+. .|.||||+| .++.+++++|+++|++.......+.+|.....
T Consensus 234 g~TpLh~A~~~~~~~~iv~~Ll~~g-advn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~ 308 (477)
T PHA02878 234 GNTPLHISVGYCKDYDILKLLLEHG-VDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAV 308 (477)
T ss_pred CCCHHHHHHHhcCCHHHHHHHHHcC-CCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 99999999976 7899999999998 89999886 799999999 57789999999999999988888888766543
No 23
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00 E-value=6.6e-33 Score=292.34 Aligned_cols=261 Identities=18% Similarity=0.201 Sum_probs=228.1
Q ss_pred CCCCcHhHHHHH--cCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHc-----CCHHHHHHHHHcCCccccccc
Q 009344 20 KRDDTALHSAAR--AGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEY-----GHVDLVAEMIKCYDLADAGIK 92 (537)
Q Consensus 20 ~~g~t~Lh~Aa~--~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~-----g~~~iv~~Ll~~~~~~~~~~~ 92 (537)
.+|.|+++.+.. .++.++|+.|+++|++ ++..+..|.||||.|+.. ++.+++++|+++| ++++.+
T Consensus 34 ~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gad------vn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~G--adiN~~ 105 (489)
T PHA02798 34 VNEYSIFQKYLQRDSPSTDIVKLFINLGAN------VNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENG--ADINKK 105 (489)
T ss_pred cccchHHHHHHhCCCCCHHHHHHHHHCCCC------CCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCC--CCCCCC
Confidence 356677764444 4589999999999987 788899999999999864 6789999999988 899999
Q ss_pred CCCCChHHHHHHHcC---CHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCC---HHHHHHHHHcCCCcccccCCCCCc
Q 009344 93 ARNGFDAFHIAAKEG---HLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGH---VEVLNFLIEAESSLITISRSNGKT 166 (537)
Q Consensus 93 ~~~g~t~Lh~A~~~g---~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~---~~iv~~Ll~~~~~~~~~~~~~g~t 166 (537)
|..|.||||+|+.++ +.+++++|+++|++++.. |..|.||||+|+..++ .+++++|+++|.+.....+..|.|
T Consensus 106 d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~-d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t 184 (489)
T PHA02798 106 NSDGETPLYCLLSNGYINNLEILLFMIENGADTTLL-DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYD 184 (489)
T ss_pred CCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCc
Confidence 999999999999986 789999999999998755 8899999999999988 999999999998854444567999
Q ss_pred HHHHHHHc----CcHHHHHHHHhcCCccccccCCCCchHHH-------HHHhCCCHHHHHHHHHhCCCCccccCCCCChH
Q 009344 167 ALHSAARN----GRLEVLKTLLAADSVIAIRTDKKGQTALH-------MAVKGQNIEVVQELIKAEPASVNMVDTKGNSP 235 (537)
Q Consensus 167 pLh~A~~~----g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh-------~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~ 235 (537)
|||.++.. ++.+++++|+++|.++... +..|.++++ .+...++.+++.+|+. + .++|.+|..|+||
T Consensus 185 ~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~-~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~-~dvN~~d~~G~TP 261 (489)
T PHA02798 185 TLHCYFKYNIDRIDADILKLFVDNGFIINKE-NKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-Y-IDINQVDELGFNP 261 (489)
T ss_pred HHHHHHHhccccCCHHHHHHHHHCCCCcccC-CccccchHHHHHHHHHhhcccchHHHHHHHHh-c-CCCCCcCcCCccH
Confidence 99998764 5899999999999887654 777888876 2445677888888765 4 8999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhh
Q 009344 236 LHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESA 293 (537)
Q Consensus 236 Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~ 293 (537)
||+|+..++.+++++|++.| ++++.+|..|.|||++|+..++.++++.|++++++..
T Consensus 262 L~~A~~~~~~~~v~~LL~~G-Adin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 262 LYYSVSHNNRKIFEYLLQLG-GDINIITELGNTCLFTAFENESKFIFNSILNKKPNKN 318 (489)
T ss_pred HHHHHHcCcHHHHHHHHHcC-CcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHH
Confidence 99999999999999999998 9999999999999999999999999999999987764
No 24
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-33 Score=238.67 Aligned_cols=207 Identities=30% Similarity=0.396 Sum_probs=150.0
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCcccccccCC-CCChHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCChHHHHHH
Q 009344 61 GETALYVAAEYGHVDLVAEMIKCYDLADAGIKAR-NGFDAFHIAAKEGHLEVLKVLLAV-YPELAMTVDLTNTTALHTAA 138 (537)
Q Consensus 61 g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~-~g~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~L~~A~ 138 (537)
+.++.+.+|+.....-|+.+++..+ ..++.++. +|+||||+||..|+.+++++|++. +..++ ..|..|+||||.|+
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~-kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~d-dkDdaGWtPlhia~ 80 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDP-KSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPD-DKDDAGWTPLHIAA 80 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcCh-hhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCC-CccccCCchhhhhh
Confidence 4566777777777777777777543 23444444 777888888888888888877752 22233 23667788888888
Q ss_pred HcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHH
Q 009344 139 MQGHVEVLNFLIEA-ESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQEL 217 (537)
Q Consensus 139 ~~g~~~iv~~Ll~~-~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 217 (537)
..|+.++|+.|+.+ +++ .+..+..|.|+||+|+..|..+++++|+++++.+... |..|.||||-|+.-|..+++++|
T Consensus 81 s~g~~evVk~Ll~r~~ad-vna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~k-D~~~qtplHRAAavGklkvie~L 158 (226)
T KOG4412|consen 81 SNGNDEVVKELLNRSGAD-VNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIK-DKQGQTPLHRAAAVGKLKVIEYL 158 (226)
T ss_pred hcCcHHHHHHHhcCCCCC-cceecCCCcceehhhhcCChhhHHHHHHhcCCCCccc-ccccCchhHHHHhccchhhHHHH
Confidence 88888888888777 444 6677777788888888888888888888777665544 77788888888888888888888
Q ss_pred HHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHH
Q 009344 218 IKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAE 274 (537)
Q Consensus 218 l~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~ 274 (537)
+..+ +.+|.+|..|+||||.|...|+.++..+|++.| ++++..|++| ||+..|.
T Consensus 159 i~~~-a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~g-Ad~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 159 ISQG-APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAG-ADTDREDKEG-TALRIAC 212 (226)
T ss_pred HhcC-CCCCcccccCccHHHHHHhccCchHHHHHHHhc-cceeeccccC-chHHHHH
Confidence 7776 777778888888888887777777777777777 7777777777 7766654
No 25
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00 E-value=4.7e-32 Score=290.46 Aligned_cols=284 Identities=18% Similarity=0.151 Sum_probs=213.7
Q ss_pred cccccCCCCCCcHhHHHHHc---CCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCC----------------
Q 009344 13 MTKQLTGKRDDTALHSAARA---GNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGH---------------- 73 (537)
Q Consensus 13 ~~~~~~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~---------------- 73 (537)
...+.+|.+|.||||+|+.. |+.++|+.||+.|++ ++..+..|.||||.|+..|+
T Consensus 23 ~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~------v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~ 96 (661)
T PHA02917 23 DPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTN------PLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATG 96 (661)
T ss_pred CcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCC------ccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccC
Confidence 34456688999999997655 889999999999876 55677888888887776554
Q ss_pred -------------------HHHHHHHHHcCCcccccccCCCCChHHHHHH--HcCCHHHHHHHHhcCCccccc--CCCCC
Q 009344 74 -------------------VDLVAEMIKCYDLADAGIKARNGFDAFHIAA--KEGHLEVLKVLLAVYPELAMT--VDLTN 130 (537)
Q Consensus 74 -------------------~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~--~~g~~~iv~~Ll~~~~~~~~~--~d~~g 130 (537)
.++|++|+++| ++++.+|.+|.||||.|+ ..|+.+++++|+++|++.+.. .+..|
T Consensus 97 ~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~G--adin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g 174 (661)
T PHA02917 97 YSNINDFNIFSYMKSKNVDVDLIKVLVEHG--FDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYG 174 (661)
T ss_pred CCCCCCcchHHHHHhhcCCHHHHHHHHHcC--CCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccc
Confidence 45556666655 778888999999999654 578999999999999987642 12223
Q ss_pred -----------ChHHHHHHH-----------cCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcH--HHHHHHHhc
Q 009344 131 -----------TTALHTAAM-----------QGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRL--EVLKTLLAA 186 (537)
Q Consensus 131 -----------~t~L~~A~~-----------~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~--~~v~~Ll~~ 186 (537)
.||||+|+. .++.+++++|+++|++ .+..|.+|.||||+|+..|+. ++++.|++
T Consensus 175 ~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gad-vn~~d~~G~TpLh~A~~~g~~~~eivk~Li~- 252 (661)
T PHA02917 175 YAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIK-PSSIDKNYCTALQYYIKSSHIDIDIVKLLMK- 252 (661)
T ss_pred cccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCC-cccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-
Confidence 599999986 4689999999999998 688899999999999999984 68888875
Q ss_pred CCcccc---ccCCCCch-------------------------------------------------------------HH
Q 009344 187 DSVIAI---RTDKKGQT-------------------------------------------------------------AL 202 (537)
Q Consensus 187 ~~~~~~---~~d~~g~t-------------------------------------------------------------~L 202 (537)
+.+... ..|..|.+ ++
T Consensus 253 g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (661)
T PHA02917 253 GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQ 332 (661)
T ss_pred CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHH
Confidence 432210 01111111 22
Q ss_pred HH---HHhCCC--HHHHHHHHHhC-----------------------------CCCccccCCCCChHHHHHHHhC-----
Q 009344 203 HM---AVKGQN--IEVVQELIKAE-----------------------------PASVNMVDTKGNSPLHIATRKG----- 243 (537)
Q Consensus 203 h~---A~~~g~--~~~v~~Ll~~~-----------------------------~~~i~~~d~~G~t~Lh~A~~~~----- 243 (537)
|. ++..|. .+++++|++.| +++++..|.+|+||||.|++.+
T Consensus 333 ~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~ 412 (661)
T PHA02917 333 HILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYN 412 (661)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchh
Confidence 22 222343 34777777764 1334445667999999987533
Q ss_pred ------------------CHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCCchHH
Q 009344 244 ------------------REQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNNPARE 305 (537)
Q Consensus 244 ------------------~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~ 305 (537)
..+++++|+++| +++|.+|..|.||||+|+..++.+++++|+++|++.......+.+|...
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~G-AdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~ 491 (661)
T PHA02917 413 FYTYTYKKGLCDMSYACPILSTINICLPYL-KDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAI 491 (661)
T ss_pred hhhhhhhhccchhhhhhhhHHHHHHHHHCC-CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHH
Confidence 356789999998 9999999999999999999999999999999999998888777777665
Q ss_pred HH
Q 009344 306 LK 307 (537)
Q Consensus 306 ~~ 307 (537)
..
T Consensus 492 A~ 493 (661)
T PHA02917 492 AI 493 (661)
T ss_pred HH
Confidence 54
No 26
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.1e-31 Score=277.26 Aligned_cols=262 Identities=15% Similarity=0.195 Sum_probs=225.3
Q ss_pred cCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHc--CCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcC--
Q 009344 32 AGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEY--GHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEG-- 107 (537)
Q Consensus 32 ~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~--g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g-- 107 (537)
..+.++|+.|++.|.+ ++.. ..|.||||.++.. ++.++|+.|+++| ++++.++ .+.||||.|+.++
T Consensus 13 ~~~~~~v~~LL~~Gad------vN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~G--Advn~~~-~~~tpL~~a~~~~~~ 82 (494)
T PHA02989 13 TVDKNALEFLLRTGFD------VNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNG--ADVNYKG-YIETPLCAVLRNREI 82 (494)
T ss_pred cCcHHHHHHHHHcCCC------cccc-cCCCCHHHHHHhcCCCChHHHHHHHHcC--CCccCCC-CCCCcHHHHHhccCc
Confidence 5789999999999987 5555 5799999876554 4799999999988 7777766 5799999998764
Q ss_pred ----CHHHHHHHHhcCCcccccCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHc--CcHH
Q 009344 108 ----HLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQ---GHVEVLNFLIEAESSLITISRSNGKTALHSAARN--GRLE 178 (537)
Q Consensus 108 ----~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~--g~~~ 178 (537)
+.++++.|+++|++++.. |..|.||||.|+.. ++.+++++|+++|+++.+..|..|.||||+|+.. ++.+
T Consensus 83 ~~~~~~~iv~~Ll~~Gadin~~-d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~ 161 (494)
T PHA02989 83 TSNKIKKIVKLLLKFGADINLK-TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKD 161 (494)
T ss_pred chhhHHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHH
Confidence 478999999999998765 88899999988765 6799999999999985477899999999998764 6899
Q ss_pred HHHHHHhcCCccccccCCCCchHHHHHHhC----CCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhC------CHHHH
Q 009344 179 VLKTLLAADSVIAIRTDKKGQTALHMAVKG----QNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKG------REQIV 248 (537)
Q Consensus 179 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~----g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~------~~~iv 248 (537)
+++.|+++|+++....+..|.||||+|+.+ ++.+++++|++.| ++++..|..|.||||.++..+ ..+++
T Consensus 162 iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~G-a~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il 240 (494)
T PHA02989 162 VIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKG-VNIETNNNGSESVLESFLDNNKILSKKEFKVL 240 (494)
T ss_pred HHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCC-CCccccCCccccHHHHHHHhchhhcccchHHH
Confidence 999999999998775678999999999875 4899999999998 899999999999999877643 46788
Q ss_pred HHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCCchHHHH
Q 009344 249 RLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNNPARELK 307 (537)
Q Consensus 249 ~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~ 307 (537)
++|+. + +++|.+|..|.||||+|+..++.+++++|+++|++.......+.+|.....
T Consensus 241 ~~l~~-~-advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~ 297 (494)
T PHA02989 241 NFILK-Y-IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAI 297 (494)
T ss_pred HHHHh-C-CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 87764 4 899999999999999999999999999999999999988888887765443
No 27
>PHA02730 ankyrin-like protein; Provisional
Probab=99.98 E-value=1.7e-30 Score=271.32 Aligned_cols=277 Identities=19% Similarity=0.193 Sum_probs=223.6
Q ss_pred cCCCCCCcHhHHHHHcC---CHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcC--CHHHHHHHHHcCCcccccc
Q 009344 17 LTGKRDDTALHSAARAG---NLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYG--HVDLVAEMIKCYDLADAGI 91 (537)
Q Consensus 17 ~~~~~g~t~Lh~Aa~~g---~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g--~~~iv~~Ll~~~~~~~~~~ 91 (537)
.+|..|.||||+|+..| +.++|+.||++|++ ++.+|..|.||||+|+..+ +.++|++|++.+..++.+.
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAd------in~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~ 109 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVE------RLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNEL 109 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCC------CcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccc
Confidence 67789999999999997 59999999999987 7788999999999999977 7999999999986676777
Q ss_pred cCCCCChHHHHHHH--cCCHHHHHHHHh-cCCcccccCC----CCCChHHHHHHHcCCHHHHHHHHHcCCCcc------c
Q 009344 92 KARNGFDAFHIAAK--EGHLEVLKVLLA-VYPELAMTVD----LTNTTALHTAAMQGHVEVLNFLIEAESSLI------T 158 (537)
Q Consensus 92 ~~~~g~t~Lh~A~~--~g~~~iv~~Ll~-~~~~~~~~~d----~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~------~ 158 (537)
.+..+.+|||.++. +++.+++++|++ .+.+++...+ ..|.+|++++...+++++|++|+++|++.. .
T Consensus 110 ~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~ 189 (672)
T PHA02730 110 TSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSC 189 (672)
T ss_pred ccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccc
Confidence 88889999998888 899999999997 4445444322 478999999999999999999999999862 1
Q ss_pred ccCCCC-CcHHHHH------HHcCcHHHHHHHHhcCCccccccCCCCchHHHH--HHhCCCHHHHHHHHH----------
Q 009344 159 ISRSNG-KTALHSA------ARNGRLEVLKTLLAADSVIAIRTDKKGQTALHM--AVKGQNIEVVQELIK---------- 219 (537)
Q Consensus 159 ~~~~~g-~tpLh~A------~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~--A~~~g~~~~v~~Ll~---------- 219 (537)
..+..+ .|.||++ ...++.++++.|+++|++++.. |..|+||||+ +...|+.|++++|++
T Consensus 190 ~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~k-d~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~ 268 (672)
T PHA02730 190 MYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGR-DEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDD 268 (672)
T ss_pred cccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCcccHHHHHHHHhcccccccccc
Confidence 123333 4555533 3567899999999999988765 9999999995 555678999999998
Q ss_pred ----------------------hCCCCccc--------------------cCCCCCh---------------------HH
Q 009344 220 ----------------------AEPASVNM--------------------VDTKGNS---------------------PL 236 (537)
Q Consensus 220 ----------------------~~~~~i~~--------------------~d~~G~t---------------------~L 236 (537)
.+ ++... .|..|.+ .|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l 347 (672)
T PHA02730 269 ISQPYIRGVLADYLNKRFRVTPYN-VDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAML 347 (672)
T ss_pred ccchhhhhhHHHhhhhhhhcccCC-cchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHH
Confidence 22 44444 5666654 67
Q ss_pred HHHHHhC---CHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCc----HHHHHHHHHcChh--hhhhcCCCCCch
Q 009344 237 HIATRKG---REQIVRLLLANSETNLNGVNRTGETALDTAEKTGH----SNLAALLREHGVE--SAKNMKPQNNPA 303 (537)
Q Consensus 237 h~A~~~~---~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~----~~i~~~L~~~g~~--~~~~~~~~~~~~ 303 (537)
|.-...+ +.+++++|+++| +++|.. ..|.||||+|+..++ .+++++|+++|++ .......+.++.
T Consensus 348 ~~Y~~~~~~v~ieIvelLIs~G-AdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~L 421 (672)
T PHA02730 348 INYLHYGDMVSIPILRCMLDNG-ATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCM 421 (672)
T ss_pred HHHHhcCCcCcHHHHHHHHHCC-CCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchH
Confidence 7777755 689999999999 999985 799999999988774 7999999999984 444444444443
No 28
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=3.7e-31 Score=254.19 Aligned_cols=194 Identities=25% Similarity=0.406 Sum_probs=161.1
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHccC-chhhHhhh--cccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCC
Q 009344 19 GKRDDTALHSAARAGNLDEVKDILTGT-EEAKLKEL--LPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARN 95 (537)
Q Consensus 19 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~-~~~~~~~l--l~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 95 (537)
..+|-|||-.||++|+.++|++|+++. ++++.... .+-.+..|-+||..|+..||.++|+.|++++ +++|.....
T Consensus 39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~g--a~VN~tT~T 116 (615)
T KOG0508|consen 39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRG--ASVNDTTRT 116 (615)
T ss_pred ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhc--Ccccccccc
Confidence 356789999999999999999999853 22222211 1223456888999999999999999999987 777777777
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC
Q 009344 96 GFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNG 175 (537)
Q Consensus 96 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 175 (537)
..|||-.||..|+++++++|++++.++... |..|.|.||+||..|+.+++++|++.|++ .+.++..|.|+||.|+..|
T Consensus 117 NStPLraACfDG~leivKyLvE~gad~~Ia-nrhGhTcLmIa~ykGh~~I~qyLle~gAD-vn~ks~kGNTALH~caEsG 194 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVKYLVEHGADPEIA-NRHGHTCLMIACYKGHVDIAQYLLEQGAD-VNAKSYKGNTALHDCAESG 194 (615)
T ss_pred CCccHHHHHhcchhHHHHHHHHcCCCCccc-ccCCCeeEEeeeccCchHHHHHHHHhCCC-cchhcccCchHHHhhhhcc
Confidence 889999999999999999999999887755 88999999999999999999999999988 6788889999999999999
Q ss_pred cHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHH
Q 009344 176 RLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELI 218 (537)
Q Consensus 176 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 218 (537)
+++++++|++++.... .|..|.|||..|+..|+.++|++|+
T Consensus 195 ~vdivq~Ll~~ga~i~--~d~~GmtPL~~Aa~tG~~~iVe~L~ 235 (615)
T KOG0508|consen 195 SVDIVQLLLKHGAKID--VDGHGMTPLLLAAVTGHTDIVERLL 235 (615)
T ss_pred cHHHHHHHHhCCceee--ecCCCCchHHHHhhhcchHHHHHHh
Confidence 9999999999887654 4777999998888888888888777
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=2.4e-30 Score=272.84 Aligned_cols=241 Identities=20% Similarity=0.276 Sum_probs=210.3
Q ss_pred cccccccCCCCCCcHhHHHHHc-----CCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcC---CHHHHHHHHH
Q 009344 11 KKMTKQLTGKRDDTALHSAARA-----GNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYG---HVDLVAEMIK 82 (537)
Q Consensus 11 ~~~~~~~~~~~g~t~Lh~Aa~~-----g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g---~~~iv~~Ll~ 82 (537)
.+.+.+.++..|.||||.|+.. ++.++++.|++.|++ ++.+|..|.||||.|+..+ +.+++++|++
T Consensus 60 ~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad------iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~ 133 (489)
T PHA02798 60 LGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGAD------INKKNSDGETPLYCLLSNGYINNLEILLFMIE 133 (489)
T ss_pred CCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCC------CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHH
Confidence 4556778899999999999864 779999999999987 8889999999999999986 7899999999
Q ss_pred cCCcccccccCCCCChHHHHHHHcCC---HHHHHHHHhcCCcccccCCCCCChHHHHHHHc----CCHHHHHHHHHcCCC
Q 009344 83 CYDLADAGIKARNGFDAFHIAAKEGH---LEVLKVLLAVYPELAMTVDLTNTTALHTAAMQ----GHVEVLNFLIEAESS 155 (537)
Q Consensus 83 ~~~~~~~~~~~~~g~t~Lh~A~~~g~---~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~----g~~~iv~~Ll~~~~~ 155 (537)
+| ++++.+|..|.||||+|+..|+ .++++.|++.+.+++...+..|.||||.++.. ++.+++++|+++|.+
T Consensus 134 ~G--advn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~ 211 (489)
T PHA02798 134 NG--ADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFI 211 (489)
T ss_pred cC--CCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCC
Confidence 88 8999999999999999999998 99999999999998877667899999998764 489999999999988
Q ss_pred cccccCCCCCcHHH-------HHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCcccc
Q 009344 156 LITISRSNGKTALH-------SAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMV 228 (537)
Q Consensus 156 ~~~~~~~~g~tpLh-------~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~ 228 (537)
.+..+..|.++++ .+...++.+++++|+.. .+++ .+|..|+||||+|+..|+.+++++|++.| ++++.+
T Consensus 212 -i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~-~dvN-~~d~~G~TPL~~A~~~~~~~~v~~LL~~G-Adin~~ 287 (489)
T PHA02798 212 -INKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSY-IDIN-QVDELGFNPLYYSVSHNNRKIFEYLLQLG-GDINII 287 (489)
T ss_pred -cccCCccccchHHHHHHHHHhhcccchHHHHHHHHhc-CCCC-CcCcCCccHHHHHHHcCcHHHHHHHHHcC-Cccccc
Confidence 4666777888876 24456778888887764 5554 45899999999999999999999999988 999999
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCC
Q 009344 229 DTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNR 264 (537)
Q Consensus 229 d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~ 264 (537)
|..|+||||+|+..++.++++.|++++ .+++..+.
T Consensus 288 d~~G~TpL~~A~~~~~~~iv~~lL~~~-~~~~~i~~ 322 (489)
T PHA02798 288 TELGNTCLFTAFENESKFIFNSILNKK-PNKNTISY 322 (489)
T ss_pred CCCCCcHHHHHHHcCcHHHHHHHHccC-CCHHHHHH
Confidence 999999999999999999999999887 66665443
No 30
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.97 E-value=9.3e-32 Score=290.87 Aligned_cols=279 Identities=30% Similarity=0.439 Sum_probs=240.7
Q ss_pred cccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCC
Q 009344 15 KQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKAR 94 (537)
Q Consensus 15 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 94 (537)
....++.|+||+|.|+..|+.+.++.++..+.+ .+.++..|.||||.|+.+++.++|+.+++.+ ++.+.++.
T Consensus 367 ~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~------~~~~gk~gvTplh~aa~~~~~~~v~l~l~~g--A~~~~~~~ 438 (1143)
T KOG4177|consen 367 RRQAEEKGFTPLHLAVKSGRVSVVELLLEAGAD------PNSAGKNGVTPLHVAAHYGNPRVVKLLLKRG--ASPNAKAK 438 (1143)
T ss_pred cCcccccCCcchhhhcccCchhHHHhhhhccCC------cccCCCCCcceeeehhhccCcceEEEEeccC--CChhhHhh
Confidence 445567788888888888888888888888765 6677888888888888888888888888876 78888888
Q ss_pred CCChHHHHHHHcC-CHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHH
Q 009344 95 NGFDAFHIAAKEG-HLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAAR 173 (537)
Q Consensus 95 ~g~t~Lh~A~~~g-~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~ 173 (537)
.|.||+|+|+..| ..++...+++.+.+.+.. -..|.||||.|+..|+.+++..|++.+.. .+.....|.+++|.|..
T Consensus 439 lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~-s~~G~T~Lhlaaq~Gh~~~~~llle~~~~-~~~~~~~~l~~lhla~~ 516 (1143)
T KOG4177|consen 439 LGYTPLHVAAKKGRYLQIARLLLQYGADPNAV-SKQGFTPLHLAAQEGHTEVVQLLLEGGAN-DNLDAKKGLTPLHLAAD 516 (1143)
T ss_pred cCCChhhhhhhcccHhhhhhhHhhcCCCcchh-ccccCcchhhhhccCCchHHHHhhhcCCc-cCccchhccchhhhhhh
Confidence 8999999999988 778888888887776655 66889999999999999999999888754 45556778899999999
Q ss_pred cCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHh
Q 009344 174 NGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLA 253 (537)
Q Consensus 174 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~ 253 (537)
.+...+++.+++++.++... +..|.||||+|+.+|+.++|++|++++ ++++.+|+.|+||||.|+..|+.+++.+|++
T Consensus 517 ~~~v~~~~~l~~~ga~v~~~-~~r~~TpLh~A~~~g~v~~VkfLLe~g-Adv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk 594 (1143)
T KOG4177|consen 517 EDTVKVAKILLEHGANVDLR-TGRGYTPLHVAVHYGNVDLVKFLLEHG-ADVNAKDKLGYTPLHQAAQQGHNDIAELLLK 594 (1143)
T ss_pred hhhHHHHHHHhhcCCceehh-cccccchHHHHHhcCCchHHHHhhhCC-ccccccCCCCCChhhHHHHcChHHHHHHHHH
Confidence 99999999999998887765 888999999999999999999999998 9999999999999999999999999999999
Q ss_pred cCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChh-----hhhhcCCCCCchHHH
Q 009344 254 NSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVE-----SAKNMKPQNNPAREL 306 (537)
Q Consensus 254 ~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~-----~~~~~~~~~~~~~~~ 306 (537)
+| +++|..|.+|.|||++|...|+.++++.|...+.+ ...+...+..|....
T Consensus 595 ~G-A~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~ 651 (1143)
T KOG4177|consen 595 HG-ASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVA 651 (1143)
T ss_pred cC-CCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHH
Confidence 99 99999999999999999999999999999999998 555555555554433
No 31
>PHA02730 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.4e-29 Score=264.55 Aligned_cols=119 Identities=15% Similarity=0.212 Sum_probs=88.2
Q ss_pred cHHHHHHHHhcCCccccccCCCCchHHHHHHhCCC----HHHHHHHHHhCC-CCccccCCCCChHHHH---HHHhC----
Q 009344 176 RLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQN----IEVVQELIKAEP-ASVNMVDTKGNSPLHI---ATRKG---- 243 (537)
Q Consensus 176 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~-~~i~~~d~~G~t~Lh~---A~~~~---- 243 (537)
+.++++.|+++|+++.. +..|.||||+|+..++ .+++++|+++|. .++|.+|.+|.||||. |...+
T Consensus 358 ~ieIvelLIs~GAdIN~--k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~ 435 (672)
T PHA02730 358 SIPILRCMLDNGATMDK--TTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYH 435 (672)
T ss_pred cHHHHHHHHHCCCCCCc--CCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhcccccc
Confidence 35555555555555543 2578888888887764 788888888873 3688888888888883 33222
Q ss_pred -----CHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcC
Q 009344 244 -----REQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMK 297 (537)
Q Consensus 244 -----~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~ 297 (537)
..+++++|+.+| +++|.+|..|.||||+|+..++.+++++|+++|++......
T Consensus 436 ~~e~~~~~ivk~LIs~G-ADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~ 493 (672)
T PHA02730 436 CYETILIDVFDILSKYM-DDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSR 493 (672)
T ss_pred ccchhHHHHHHHHHhcc-cchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCC
Confidence 235688888887 88888888889999998888888888888888888766654
No 32
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=1.6e-30 Score=260.62 Aligned_cols=210 Identities=29% Similarity=0.415 Sum_probs=191.3
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcC
Q 009344 62 ETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQG 141 (537)
Q Consensus 62 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g 141 (537)
.+.++.|+++|..+.|+.|++.. ..+.+..|++|.|+||+|+.+++.+++++|++++++.+.....-+.||||+|+++|
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G 123 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG 123 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence 45678899999999999999973 47888889999999999999999999999999999988775577899999999999
Q ss_pred CHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhC
Q 009344 142 HVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAE 221 (537)
Q Consensus 142 ~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 221 (537)
+..+|..|+++|++ ++..|.+|.+|||.|+..|+.-.+-+|+.++.+... +|.+|+||||+|+.+|....+..||+.+
T Consensus 124 ~~~vv~lLlqhGAd-pt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~-~D~~grTpLmwAaykg~~~~v~~LL~f~ 201 (600)
T KOG0509|consen 124 HISVVDLLLQHGAD-PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL-RDNNGRTPLMWAAYKGFALFVRRLLKFG 201 (600)
T ss_pred cHHHHHHHHHcCCC-CceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC-cCCCCCCHHHHHHHhcccHHHHHHHHhc
Confidence 99999999999999 689999999999999999999999999999977665 4999999999999999988899999988
Q ss_pred CCCccccC-CCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHc
Q 009344 222 PASVNMVD-TKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKT 276 (537)
Q Consensus 222 ~~~i~~~d-~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~ 276 (537)
+.++..| +.|+||||+|+..|+..+++ |+..++.+.+..|.+|.||+++|...
T Consensus 202 -a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 202 -ASLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred -ccccccccccCCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCCHHHHHHHh
Confidence 7777777 99999999999999999999 66666699999999999999999876
No 33
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=7.2e-30 Score=255.97 Aligned_cols=212 Identities=28% Similarity=0.421 Sum_probs=195.4
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHcc-CchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccC-CCCC
Q 009344 20 KRDDTALHSAARAGNLDEVKDILTG-TEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKA-RNGF 97 (537)
Q Consensus 20 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~-~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~ 97 (537)
+....-++.|++.|+++.|+.+++. +.+ ++..|.+|-|+||.|+.+++.+++++|++++ +++|... .-+.
T Consensus 42 d~~~~~~v~A~q~G~l~~v~~lve~~g~~------v~~~D~~g~tlLHWAAiNNrl~v~r~li~~g--advn~~gG~l~s 113 (600)
T KOG0509|consen 42 DSSLDDIVKATQYGELETVKELVESEGES------VNNPDREGVTLLHWAAINNRLDVARYLISHG--ADVNAIGGVLGS 113 (600)
T ss_pred chhhhhhhhHhhcchHHHHHHHHhhcCcC------CCCCCcCCccceeHHHHcCcHHHHHHHHHcC--CCccccCCCCCC
Confidence 3345678999999999999999997 443 8889999999999999999999999999998 7887776 7789
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcH
Q 009344 98 DAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRL 177 (537)
Q Consensus 98 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~ 177 (537)
||||+|+++|+..++..|+++|+++... |.+|.+|||.|+..|+..+|-+|+.++.+ .+.+|.+|+||||+|+.+|+.
T Consensus 114 tPLHWAar~G~~~vv~lLlqhGAdpt~~-D~~G~~~lHla~~~~~~~~vayll~~~~d-~d~~D~~grTpLmwAaykg~~ 191 (600)
T KOG0509|consen 114 TPLHWAARNGHISVVDLLLQHGADPTLK-DKQGLTPLHLAAQFGHTALVAYLLSKGAD-IDLRDNNGRTPLMWAAYKGFA 191 (600)
T ss_pred CcchHHHHcCcHHHHHHHHHcCCCCcee-cCCCCcHHHHHHHhCchHHHHHHHHhccc-CCCcCCCCCCHHHHHHHhccc
Confidence 9999999999999999999999998876 99999999999999999999999999966 789999999999999999999
Q ss_pred HHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHh
Q 009344 178 EVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRK 242 (537)
Q Consensus 178 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~ 242 (537)
..+..|++-++......|..|.||||+|+..|+..++. |+..++++.+.+|.+|.||+.+|..+
T Consensus 192 ~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 192 LFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHHHHHHhcccccccccccCCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCCHHHHHHHh
Confidence 98999999999988887799999999999999999999 66666699999999999999999877
No 34
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.97 E-value=2.4e-30 Score=280.01 Aligned_cols=280 Identities=28% Similarity=0.412 Sum_probs=241.5
Q ss_pred ccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccC
Q 009344 14 TKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKA 93 (537)
Q Consensus 14 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 93 (537)
..+..+..|.||||.|+..|+.+....+...++. -......|.||+|+|+.+|..++++.++..+ .+++..+
T Consensus 333 ~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~------~~~a~~k~~~pl~la~~~g~~~~v~Lll~~g--a~~~~~g 404 (1143)
T KOG4177|consen 333 TPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQ------RRQAEEKGFTPLHLAVKSGRVSVVELLLEAG--ADPNSAG 404 (1143)
T ss_pred CccccCcCCcccccHhhhhhhHHHHHHhhccccc------cCcccccCCcchhhhcccCchhHHHhhhhcc--CCcccCC
Confidence 3455667777888888888877766666655543 3345678899999999999999999999987 6688889
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCcccccCCCCCcHHHHHH
Q 009344 94 RNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQG-HVEVLNFLIEAESSLITISRSNGKTALHSAA 172 (537)
Q Consensus 94 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g-~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~ 172 (537)
..|.||||.|+..++.++++.+++++.+.... +..|.||+|.|+..| ..+....+++.+.+ .+..-..|.||||.|+
T Consensus 405 k~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~-~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~-~n~~s~~G~T~Lhlaa 482 (1143)
T KOG4177|consen 405 KNGVTPLHVAAHYGNPRVVKLLLKRGASPNAK-AKLGYTPLHVAAKKGRYLQIARLLLQYGAD-PNAVSKQGFTPLHLAA 482 (1143)
T ss_pred CCCcceeeehhhccCcceEEEEeccCCChhhH-hhcCCChhhhhhhcccHhhhhhhHhhcCCC-cchhccccCcchhhhh
Confidence 99999999999999999999999988887765 788899999999999 77777778877777 6778888999999999
Q ss_pred HcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHH
Q 009344 173 RNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLL 252 (537)
Q Consensus 173 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll 252 (537)
..|+.+++..+++.++..... .+.|-+++|+|...+...+++.+++++ +.++.++..|.||||.|+..|+.++|++|+
T Consensus 483 q~Gh~~~~~llle~~~~~~~~-~~~~l~~lhla~~~~~v~~~~~l~~~g-a~v~~~~~r~~TpLh~A~~~g~v~~VkfLL 560 (1143)
T KOG4177|consen 483 QEGHTEVVQLLLEGGANDNLD-AKKGLTPLHLAADEDTVKVAKILLEHG-ANVDLRTGRGYTPLHVAVHYGNVDLVKFLL 560 (1143)
T ss_pred ccCCchHHHHhhhcCCccCcc-chhccchhhhhhhhhhHHHHHHHhhcC-CceehhcccccchHHHHHhcCCchHHHHhh
Confidence 999999999999887554433 678899999999999999999999988 999999999999999999999999999999
Q ss_pred hcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCCchHHH
Q 009344 253 ANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNNPAREL 306 (537)
Q Consensus 253 ~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~ 306 (537)
+++ ++++.+++.|+||||.|+..|+.+++++|+++|++......++.+|....
T Consensus 561 e~g-Adv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA 613 (1143)
T KOG4177|consen 561 EHG-ADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIA 613 (1143)
T ss_pred hCC-ccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHH
Confidence 999 99999999999999999999999999999999999998888887775543
No 35
>PHA02917 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.5e-28 Score=263.48 Aligned_cols=242 Identities=18% Similarity=0.194 Sum_probs=199.2
Q ss_pred HHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHc---CCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHH-
Q 009344 35 LDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEY---GHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLE- 110 (537)
Q Consensus 35 ~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~- 110 (537)
++.|+.|+.++.. .+..|..|.||||+|+.. |+.++|++|++.| ++.+.++..|.||||.|+..|+.+
T Consensus 12 ~~~~~~l~~~~~~------~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~g--a~v~~~~~~g~TpL~~Aa~~g~~~v 83 (661)
T PHA02917 12 LDELKQMLRDRDP------NDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSG--TNPLHKNWRQLTPLEEYTNSRHVKV 83 (661)
T ss_pred HHHHHHHHhccCc------ccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCC--CCccccCCCCCCHHHHHHHcCChhH
Confidence 5678888876654 567799999999998665 8899999999987 788889999999999999999854
Q ss_pred ---HHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHH--HcCcHHHHHHHHh
Q 009344 111 ---VLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAA--RNGRLEVLKTLLA 185 (537)
Q Consensus 111 ---iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~--~~g~~~~v~~Ll~ 185 (537)
+++.|++.+...+.. + ..+++|+|+..|+.+++++|+++|++ ++..|.+|.||||.|+ ..|+.+++++|++
T Consensus 84 ~~~~~~~Ll~~~~~~n~~-~--~~~~~~~a~~~~~~e~vk~Ll~~Gad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~ 159 (661)
T PHA02917 84 NKDIAMALLEATGYSNIN-D--FNIFSYMKSKNVDVDLIKVLVEHGFD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIE 159 (661)
T ss_pred HHHHHHHHHhccCCCCCC-C--cchHHHHHhhcCCHHHHHHHHHcCCC-CCccCCCCccHHHHHHHccCCCHHHHHHHHH
Confidence 567787765432211 2 23778889999999999999999999 6788999999999654 5789999999999
Q ss_pred cCCccccc--cCCCC-----------chHHHHHHh-----------CCCHHHHHHHHHhCCCCccccCCCCChHHHHHHH
Q 009344 186 ADSVIAIR--TDKKG-----------QTALHMAVK-----------GQNIEVVQELIKAEPASVNMVDTKGNSPLHIATR 241 (537)
Q Consensus 186 ~~~~~~~~--~d~~g-----------~t~Lh~A~~-----------~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~ 241 (537)
+|+++... .+..| .||||+|+. +++.+++++|++.| +++|.+|.+|+||||+|+.
T Consensus 160 ~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~G-advn~~d~~G~TpLh~A~~ 238 (661)
T PHA02917 160 NGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHG-IKPSSIDKNYCTALQYYIK 238 (661)
T ss_pred cCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCC-CCcccCCCCCCcHHHHHHH
Confidence 99987632 12234 599999986 46899999999998 9999999999999999999
Q ss_pred hCCH--HHHHHHHhcCCCCcc----cCCCCCCCHHHHHHHcC---------cHHHHHHHHHcChh
Q 009344 242 KGRE--QIVRLLLANSETNLN----GVNRTGETALDTAEKTG---------HSNLAALLREHGVE 291 (537)
Q Consensus 242 ~~~~--~iv~~Ll~~~~~~~~----~~d~~g~T~L~~A~~~~---------~~~i~~~L~~~g~~ 291 (537)
.|+. +++++|++ | ++++ ..|..|.||+++|+..+ +.+++++|+++|++
T Consensus 239 ~g~~~~eivk~Li~-g-~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~ 301 (661)
T PHA02917 239 SSHIDIDIVKLLMK-G-IDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP 301 (661)
T ss_pred cCCCcHHHHHHHHh-C-CcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC
Confidence 9985 79999975 4 5554 46778889999998421 67999999999986
No 36
>PHA02792 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.1e-27 Score=247.78 Aligned_cols=262 Identities=14% Similarity=0.122 Sum_probs=163.5
Q ss_pred CCCCCCcHhHHHH-HcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHH-cCCHHHHHHHHHcCCcc--------
Q 009344 18 TGKRDDTALHSAA-RAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAE-YGHVDLVAEMIKCYDLA-------- 87 (537)
Q Consensus 18 ~~~~g~t~Lh~Aa-~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~-~g~~~iv~~Ll~~~~~~-------- 87 (537)
.+-+|.+++|+-+ ..|++|+|+.|+++|++ ++.++..|.||||+|+. .++.|++++|++.|...
T Consensus 67 ~n~~~~~~~~~~~s~n~~lElvk~LI~~GAd------vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~ 140 (631)
T PHA02792 67 KNINDFDIFEYLCSDNIDIELLKLLISKGLE------INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGY 140 (631)
T ss_pred CccCCccHHHHHHHhcccHHHHHHHHHcCCC------cccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCc
Confidence 4555566665443 34566666666666655 44555556666666644 46666666666655210
Q ss_pred --------------------------cccccCCCCChHHHHHHHcC-------CHHHHHHHHhcCCcccccCCCCCChHH
Q 009344 88 --------------------------DAGIKARNGFDAFHIAAKEG-------HLEVLKVLLAVYPELAMTVDLTNTTAL 134 (537)
Q Consensus 88 --------------------------~~~~~~~~g~t~Lh~A~~~g-------~~~iv~~Ll~~~~~~~~~~d~~g~t~L 134 (537)
..+..+..|.||||+|+.++ +.|+++.|++++.+++.. |..|.|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~-d~~g~t~l 219 (631)
T PHA02792 141 KIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYY-TYREHTTL 219 (631)
T ss_pred chhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCcc-CCCCChHH
Confidence 01133445666666666666 566666666666665543 55566666
Q ss_pred HHHHHcC--CHHHHHHH---------------------------------------------------------------
Q 009344 135 HTAAMQG--HVEVLNFL--------------------------------------------------------------- 149 (537)
Q Consensus 135 ~~A~~~g--~~~iv~~L--------------------------------------------------------------- 149 (537)
|+|+.+. +.|+++.|
T Consensus 220 ~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~ 299 (631)
T PHA02792 220 YYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSIL 299 (631)
T ss_pred HHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHH
Confidence 6666655 44444444
Q ss_pred ----------------------------HHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCC--Cc
Q 009344 150 ----------------------------IEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKK--GQ 199 (537)
Q Consensus 150 ----------------------------l~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~--g~ 199 (537)
++.|.+.. ......+++.|+..|+.+++++|+++|+++... |.. +.
T Consensus 300 ~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~k-D~~g~~~ 375 (631)
T PHA02792 300 KRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNVVVED-DDNIINI 375 (631)
T ss_pred HHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhh-cCCCCCh
Confidence 44443321 112445677777788888888888888776544 444 35
Q ss_pred hHHHHHHhCCCHH---HHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHH-
Q 009344 200 TALHMAVKGQNIE---VVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEK- 275 (537)
Q Consensus 200 t~Lh~A~~~g~~~---~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~- 275 (537)
||||+|+.....+ ++++|++.+ +++|.+|..|+||||+|+..++.+++++|+++| ++++.+|..|.|||++|..
T Consensus 376 TpLh~A~~n~~~~v~~IlklLIs~G-ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~G-ADIN~kD~~G~TpL~~A~~~ 453 (631)
T PHA02792 376 MPLFPTLSIHESDVLSILKLCKPYI-DDINKIDKHGRSILYYCIESHSVSLVEWLIDNG-ADINITTKYGSTCIGICVIL 453 (631)
T ss_pred hHHHHHHHhccHhHHHHHHHHHhcC-CccccccccCcchHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHH
Confidence 7788776655443 466667766 778888888888888888888888888888776 7788888888888888765
Q ss_pred --cCc-------HHHHHHHHHcChhh
Q 009344 276 --TGH-------SNLAALLREHGVES 292 (537)
Q Consensus 276 --~~~-------~~i~~~L~~~g~~~ 292 (537)
.+. .+++++|+++|.+.
T Consensus 454 ~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 454 AHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred HhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 222 34566666666443
No 37
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=6.2e-28 Score=232.10 Aligned_cols=220 Identities=31% Similarity=0.489 Sum_probs=189.0
Q ss_pred HHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccc--------cccCCCCCh
Q 009344 27 HSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADA--------GIKARNGFD 98 (537)
Q Consensus 27 h~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~--------~~~~~~g~t 98 (537)
..|++.|++..+..|+....+.++.++++.. ..|.|||-+||++||.++|++|+++.. +++ +-...+|-+
T Consensus 9 ~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~-~~g~tPL~iaaRnGH~~vVeyLle~~~-a~~e~~GsV~FDge~Iegap 86 (615)
T KOG0508|consen 9 INAARDGKLQLLAKLLINSSNEEIISLIGEV-QNGGTPLLIAARNGHADVVEYLLEHCR-ASPEQGGSVRFDGETIEGAP 86 (615)
T ss_pred HHHhhhhhHHHHHHHHhCCchHHHHHHhccc-cCCCCceeeehhcCcHHHHHHHHHHhc-CCccCCceEEeCCcccCCCc
Confidence 3788999999999888776666676666554 567799999999999999999999541 222 223456778
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHH
Q 009344 99 AFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLE 178 (537)
Q Consensus 99 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~ 178 (537)
||..|+..||+++|+.|++++++.+.. ...+.|||..||..|+.++|++|++++++ +++.|..|.|.|++||.+|+.+
T Consensus 87 pLWaAsaAGHl~vVk~L~~~ga~VN~t-T~TNStPLraACfDG~leivKyLvE~gad-~~IanrhGhTcLmIa~ykGh~~ 164 (615)
T KOG0508|consen 87 PLWAASAAGHLEVVKLLLRRGASVNDT-TRTNSTPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTCLMIACYKGHVD 164 (615)
T ss_pred hhhHHhccCcHHHHHHHHHhcCccccc-cccCCccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCeeEEeeeccCchH
Confidence 999999999999999999999887755 55677999999999999999999999998 6889999999999999999999
Q ss_pred HHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHh
Q 009344 179 VLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLA 253 (537)
Q Consensus 179 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~ 253 (537)
++++|++.+++++.. +..|.|+||.|++.|+.+++++|++++ +.++ +|..|.|||..|+..|+.++|++|++
T Consensus 165 I~qyLle~gADvn~k-s~kGNTALH~caEsG~vdivq~Ll~~g-a~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 165 IAQYLLEQGADVNAK-SYKGNTALHDCAESGSVDIVQLLLKHG-AKID-VDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred HHHHHHHhCCCcchh-cccCchHHHhhhhcccHHHHHHHHhCC-ceee-ecCCCCchHHHHhhhcchHHHHHHhc
Confidence 999999999998765 889999999999999999999999987 5554 57779999999999999999999985
No 38
>PHA02792 ankyrin-like protein; Provisional
Probab=99.95 E-value=5.7e-26 Score=235.02 Aligned_cols=274 Identities=15% Similarity=0.106 Sum_probs=219.6
Q ss_pred CCCCCcHhHHHHHcCCH-HHHHHHHccCchhhHhhhcccccCCCCCHHHH-HHHcCCHHHHHHHHHcCCcccccccCCCC
Q 009344 19 GKRDDTALHSAARAGNL-DEVKDILTGTEEAKLKELLPKQNQSGETALYV-AAEYGHVDLVAEMIKCYDLADAGIKARNG 96 (537)
Q Consensus 19 ~~~g~t~Lh~Aa~~g~~-~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~-A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g 96 (537)
..+|.||||.=..+.+. ..++.++..+.. .+..|.+|.+|+|+ |...|+.|+|++|+++| ++.+.++..|
T Consensus 34 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~G--AdvN~~~n~~ 105 (631)
T PHA02792 34 EYDGETPLKAYVTKKNNNIKNDVVILLLSS------VDYKNINDFDIFEYLCSDNIDIELLKLLISKG--LEINSIKNGI 105 (631)
T ss_pred ccCCCccHHHHHhhhhhhHHHHHHHHHHhC------CCcCccCCccHHHHHHHhcccHHHHHHHHHcC--CCcccccCCC
Confidence 35677999998665542 223333333322 45678899999975 56689999999999987 8999999999
Q ss_pred ChHHHHHHH-cCCHHHHHHHHhcCCcccc-----------------------------------cCCCCCChHHHHHHHc
Q 009344 97 FDAFHIAAK-EGHLEVLKVLLAVYPELAM-----------------------------------TVDLTNTTALHTAAMQ 140 (537)
Q Consensus 97 ~t~Lh~A~~-~g~~~iv~~Ll~~~~~~~~-----------------------------------~~d~~g~t~L~~A~~~ 140 (537)
.+|+|+|+. .++.|++++|+++|++... ..|..|.||||+|+..
T Consensus 106 ~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~ 185 (631)
T PHA02792 106 NIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIIT 185 (631)
T ss_pred CcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhh
Confidence 999999966 6999999999999975211 2245699999999999
Q ss_pred C-------CHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC--cHHHHHHHHhc-------------------------
Q 009344 141 G-------HVEVLNFLIEAESSLITISRSNGKTALHSAARNG--RLEVLKTLLAA------------------------- 186 (537)
Q Consensus 141 g-------~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g--~~~~v~~Ll~~------------------------- 186 (537)
+ +.++++.|+++|++ .+..|..|.||||+|+.+. ..++++.|++.
T Consensus 186 ~s~~~~~~~~~v~k~Li~~g~~-~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~ 264 (631)
T PHA02792 186 RSQDGYATSLDVINYLISHEKE-MRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHK 264 (631)
T ss_pred CCcccccCCHHHHHHHHhCCCC-cCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccC
Confidence 9 89999999999999 5678889999999999888 56666666542
Q ss_pred ------------------------------------------------------------------CCccccccCCCCch
Q 009344 187 ------------------------------------------------------------------DSVIAIRTDKKGQT 200 (537)
Q Consensus 187 ------------------------------------------------------------------~~~~~~~~d~~g~t 200 (537)
|.+.. ...+.+
T Consensus 265 id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n 341 (631)
T PHA02792 265 IDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHIN 341 (631)
T ss_pred ccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcch
Confidence 11110 112456
Q ss_pred HHHHHHhCCCHHHHHHHHHhCCCCccccCCCC--ChHHHHHHHhCCH---HHHHHHHhcCCCCcccCCCCCCCHHHHHHH
Q 009344 201 ALHMAVKGQNIEVVQELIKAEPASVNMVDTKG--NSPLHIATRKGRE---QIVRLLLANSETNLNGVNRTGETALDTAEK 275 (537)
Q Consensus 201 ~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G--~t~Lh~A~~~~~~---~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~ 275 (537)
+++.|+..|+.+++++|+++| ++++.+|.+| .||||+|...... +++++|+++| +++|.+|..|.||||+|+.
T Consensus 342 ~~~~Aa~~gn~eIVelLIs~G-ADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G-ADIN~kD~~G~TPLh~Aa~ 419 (631)
T PHA02792 342 KYFQKFDNRDPKVVEYILKNG-NVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYI-DDINKIDKHGRSILYYCIE 419 (631)
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcC-CccccccccCcchHHHHHH
Confidence 788899999999999999998 9999999875 5999998877665 3578889988 8999999999999999999
Q ss_pred cCcHHHHHHHHHcChhhhhhcCCCCCchHHH
Q 009344 276 TGHSNLAALLREHGVESAKNMKPQNNPAREL 306 (537)
Q Consensus 276 ~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~ 306 (537)
.++.+++++|+++|++.......+.++....
T Consensus 420 ~~n~eivelLLs~GADIN~kD~~G~TpL~~A 450 (631)
T PHA02792 420 SHSVSLVEWLIDNGADINITTKYGSTCIGIC 450 (631)
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 9999999999999999888877777765543
No 39
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94 E-value=5.7e-26 Score=211.38 Aligned_cols=173 Identities=23% Similarity=0.276 Sum_probs=104.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCcccccC-CCCCcHHHHHH
Q 009344 96 GFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQG--HVEVLNFLIEAESSLITISR-SNGKTALHSAA 172 (537)
Q Consensus 96 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~-~~g~tpLh~A~ 172 (537)
+.||||.|+..|+.++++.|++.. ...|..|.||||+|+..+ +.+++++|+++|+++ +..+ ..|.||||+|+
T Consensus 21 ~~~pL~~A~~~~~~~~vk~Li~~~----n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpLh~a~ 95 (209)
T PHA02859 21 YCNPLFYYVEKDDIEGVKKWIKFV----NDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSALHHYL 95 (209)
T ss_pred cCcHHHHHHHhCcHHHHHHHHHhh----hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHHHHHH
Confidence 344555555555555555554431 122445555555555432 555555665555553 2332 35566666554
Q ss_pred Hc---CcHHHHHHHHhcCCccccccCCCCchHHHHHHh--CCCHHHHHHHHHhCCCCccccCCCCChHHHH-HHHhCCHH
Q 009344 173 RN---GRLEVLKTLLAADSVIAIRTDKKGQTALHMAVK--GQNIEVVQELIKAEPASVNMVDTKGNSPLHI-ATRKGREQ 246 (537)
Q Consensus 173 ~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~-A~~~~~~~ 246 (537)
.. ++.++++.|+++++++.. +|..|.||||+|+. .++.+++++|++.+ ++++.+|.+|+||||. |+..++.+
T Consensus 96 ~~~~~~~~eiv~~Ll~~gadin~-~d~~G~TpLh~a~~~~~~~~~iv~~Li~~g-adin~~d~~g~t~Lh~~a~~~~~~~ 173 (209)
T PHA02859 96 SFNKNVEPEILKILIDSGSSITE-EDEDGKNLLHMYMCNFNVRINVIKLLIDSG-VSFLNKDFDNNNILYSYILFHSDKK 173 (209)
T ss_pred HhCccccHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhccCCHHHHHHHHHcC-CCcccccCCCCcHHHHHHHhcCCHH
Confidence 32 356666666666666544 36667777776654 35677777777766 7777777777777774 45566777
Q ss_pred HHHHHHhcCCCCcccCCCCCCCHHHHHHHc
Q 009344 247 IVRLLLANSETNLNGVNRTGETALDTAEKT 276 (537)
Q Consensus 247 iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~ 276 (537)
++++|+++| ++++.+|..|.||||+|...
T Consensus 174 iv~~Ll~~G-adi~~~d~~g~tpl~la~~~ 202 (209)
T PHA02859 174 IFDFLTSLG-IDINETNKSGYNCYDLIKFR 202 (209)
T ss_pred HHHHHHHcC-CCCCCCCCCCCCHHHHHhhh
Confidence 777777776 77777777777777777654
No 40
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94 E-value=6.8e-26 Score=210.83 Aligned_cols=179 Identities=20% Similarity=0.184 Sum_probs=152.9
Q ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcC--CHHHHHHHHhcCCcccccCCCCCChHH
Q 009344 57 QNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEG--HLEVLKVLLAVYPELAMTVDLTNTTAL 134 (537)
Q Consensus 57 ~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~iv~~Ll~~~~~~~~~~d~~g~t~L 134 (537)
....+.||||.|+..|+.++|+.|++. .+..+..|.||||.|+..+ +.+++++|++++++++...+..|.|||
T Consensus 17 ~~~~~~~pL~~A~~~~~~~~vk~Li~~-----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpL 91 (209)
T PHA02859 17 LFYRYCNPLFYYVEKDDIEGVKKWIKF-----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSAL 91 (209)
T ss_pred HhhccCcHHHHHHHhCcHHHHHHHHHh-----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHH
Confidence 356779999999999999999999874 3456888999999998754 899999999999988766446889999
Q ss_pred HHHHHc---CCHHHHHHHHHcCCCcccccCCCCCcHHHHHHH--cCcHHHHHHHHhcCCccccccCCCCchHHHH-HHhC
Q 009344 135 HTAAMQ---GHVEVLNFLIEAESSLITISRSNGKTALHSAAR--NGRLEVLKTLLAADSVIAIRTDKKGQTALHM-AVKG 208 (537)
Q Consensus 135 ~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~--~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~-A~~~ 208 (537)
|+|+.. ++.+++++|+++|++ ++..|.+|.||||+|+. .++.+++++|++.+.++... |..|.||||. |+..
T Consensus 92 h~a~~~~~~~~~eiv~~Ll~~gad-in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~-d~~g~t~Lh~~a~~~ 169 (209)
T PHA02859 92 HHYLSFNKNVEPEILKILIDSGSS-ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNK-DFDNNNILYSYILFH 169 (209)
T ss_pred HHHHHhCccccHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc-cCCCCcHHHHHHHhc
Confidence 998764 478999999999888 57789999999999876 46899999999999887654 8999999995 5678
Q ss_pred CCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhC
Q 009344 209 QNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKG 243 (537)
Q Consensus 209 g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~ 243 (537)
++.+++++|++.+ ++++.+|..|+||||+|..++
T Consensus 170 ~~~~iv~~Ll~~G-adi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 170 SDKKIFDFLTSLG-IDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred CCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhhh
Confidence 8999999999987 899999999999999998764
No 41
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.94 E-value=5.2e-24 Score=235.84 Aligned_cols=239 Identities=22% Similarity=0.248 Sum_probs=138.6
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHH-HHHHcCCHHHHHHHHHcCCcccccccCCCCCh
Q 009344 20 KRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALY-VAAEYGHVDLVAEMIKCYDLADAGIKARNGFD 98 (537)
Q Consensus 20 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh-~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t 98 (537)
..++..++.||+.|+.+.|+.+++.... ..++..|..|.|||| .|+..++.++++.|++.+. .+..|.|
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~----~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~------~~~~G~T 84 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKK----LNINCPDRLGRSALFVAAIENENLELTELLLNLSC------RGAVGDT 84 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccc----cCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC------CCCcChH
Confidence 5667888888888888888888876542 235667788888888 7778888888888888652 5677888
Q ss_pred HHHHHHHcCCHHHH----HHHHhcCCcc-----c----ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCC
Q 009344 99 AFHIAAKEGHLEVL----KVLLAVYPEL-----A----MTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGK 165 (537)
Q Consensus 99 ~Lh~A~~~g~~~iv----~~Ll~~~~~~-----~----~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~ 165 (537)
|||.|+.+ +.+.+ ..+.+..++. . ...+..|.||||+|+..|+.++++.|+++|++.. ..+. +.
T Consensus 85 ~Lh~A~~~-~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~-~~~~-~~ 161 (743)
T TIGR00870 85 LLHAISLE-YVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVP-ARAC-GD 161 (743)
T ss_pred HHHHHHhc-cHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC-cCcC-Cc
Confidence 88888762 22333 3333333210 0 0112346666666666666666666666665532 1110 00
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhC--
Q 009344 166 TALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKG-- 243 (537)
Q Consensus 166 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~-- 243 (537)
... . .. .......|+||||.|+..|+.+++++|++.+ ++++.+|..|+||||+|+..+
T Consensus 162 ~~~----------------~-~~--~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~g-adin~~d~~g~T~Lh~A~~~~~~ 221 (743)
T TIGR00870 162 FFV----------------K-SQ--GVDSFYHGESPLNAAACLGSPSIVALLSEDP-ADILTADSLGNTLLHLLVMENEF 221 (743)
T ss_pred hhh----------------c-CC--CCCcccccccHHHHHHHhCCHHHHHHHhcCC-cchhhHhhhhhHHHHHHHhhhhh
Confidence 000 0 00 0001134666666666666666666666654 566666666666666666654
Q ss_pred -------CHHHHHHHHhcCC--CCc----ccCCCCCCCHHHHHHHcCcHHHHHHHHHcChh
Q 009344 244 -------REQIVRLLLANSE--TNL----NGVNRTGETALDTAEKTGHSNLAALLREHGVE 291 (537)
Q Consensus 244 -------~~~iv~~Ll~~~~--~~~----~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~ 291 (537)
...+.+++++.+. .+. +..|.+|.||||+|+..|+.++++.|++.+.+
T Consensus 222 ~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~ 282 (743)
T TIGR00870 222 KAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK 282 (743)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHh
Confidence 1223344443321 122 45566666666666666666666666664433
No 42
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.8e-25 Score=223.43 Aligned_cols=188 Identities=16% Similarity=0.148 Sum_probs=121.1
Q ss_pred HHHHcCCHHHHHHHHHcCCccccc------ccCCCCChHHHHHHH--cCCHHHHHHHHhcCCcccccCCCCCChHHHHHH
Q 009344 67 VAAEYGHVDLVAEMIKCYDLADAG------IKARNGFDAFHIAAK--EGHLEVLKVLLAVYPELAMTVDLTNTTALHTAA 138 (537)
Q Consensus 67 ~A~~~g~~~iv~~Ll~~~~~~~~~------~~~~~g~t~Lh~A~~--~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~ 138 (537)
+|+..+..++++.|+.++ .+.+ .++..++|+||.++. .|+.+++++|+++|+++.. .++.||+|.|+
T Consensus 83 ~~~~~~~k~~~~~l~s~~--~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~---~~~~t~lh~A~ 157 (437)
T PHA02795 83 LFAYITYKDIISALVSKN--YMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK---IECLNAYFRGI 157 (437)
T ss_pred HHhhcchHHHHHHHHhcc--cccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC---CCCCCHHHHHH
Confidence 667777777777777766 3433 455667777777776 6677777777777776653 23466777777
Q ss_pred HcCCHHHHHHHHHcCCCccccc-----CCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHH
Q 009344 139 MQGHVEVLNFLIEAESSLITIS-----RSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEV 213 (537)
Q Consensus 139 ~~g~~~iv~~Ll~~~~~~~~~~-----~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~ 213 (537)
..++.+++++|+++|++..+.. +..+.+++|.|+..++.++++.|++++++.... |..|.||||+|+..|+.++
T Consensus 158 ~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~k-D~~G~TpLh~Aa~~g~~ei 236 (437)
T PHA02795 158 CKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQL-DAGGRTLLYRAIYAGYIDL 236 (437)
T ss_pred HcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcC-CCCCCCHHHHHHHcCCHHH
Confidence 7777777777777765432222 123556666666666677777777766665543 6667777777777777777
Q ss_pred HHHHHHhCCCCccccCCCCChHHHHHHHhCC--------HHHHHHHHhcCCCCcccC
Q 009344 214 VQELIKAEPASVNMVDTKGNSPLHIATRKGR--------EQIVRLLLANSETNLNGV 262 (537)
Q Consensus 214 v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~--------~~iv~~Ll~~~~~~~~~~ 262 (537)
+++|++.| ++++.+|..|+||||+|+..|+ .+++++|++++ ++++..
T Consensus 237 VelLL~~G-AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~g-adI~~~ 291 (437)
T PHA02795 237 VSWLLENG-ANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREP-LSIDCI 291 (437)
T ss_pred HHHHHHCC-CCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCC-CCCCch
Confidence 77777665 6666677777777777766663 46666666665 455443
No 43
>PHA02795 ankyrin-like protein; Provisional
Probab=99.93 E-value=6.2e-25 Score=219.67 Aligned_cols=205 Identities=15% Similarity=0.080 Sum_probs=178.6
Q ss_pred HHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCccc------ccCCCCCChHHHHHHH--cCCHHHHHH
Q 009344 77 VAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELA------MTVDLTNTTALHTAAM--QGHVEVLNF 148 (537)
Q Consensus 77 v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~------~~~d~~g~t~L~~A~~--~g~~~iv~~ 148 (537)
-++++.++ .+.+.+..+| +|+..+..|+++.|+.++.+.+ . .+..++|+||+++. .|+.+++++
T Consensus 65 ~~~~~~~~--~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~-~~~~~~~~L~~~~~n~~n~~eiV~~ 136 (437)
T PHA02795 65 YDYFRIHR--DNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIK-NCNSVQDLLLYYLSNAYVEIDIVDF 136 (437)
T ss_pred HHHHHHcC--cchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhh-ccccccHHHHHHHHhcCCCHHHHHH
Confidence 36777776 4555555555 8999999999999999999866 4 46779999999999 899999999
Q ss_pred HHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCcccccc-----CCCCchHHHHHHhCCCHHHHHHHHHhCCC
Q 009344 149 LIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRT-----DKKGQTALHMAVKGQNIEVVQELIKAEPA 223 (537)
Q Consensus 149 Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-----d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 223 (537)
|+++|++. +. .++.||+|.|+..|+.+++++|+++|++..... +..+.+++|.|+.+++.+++++|++++ +
T Consensus 137 LI~~GADI-n~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-A 212 (437)
T PHA02795 137 MVDHGAVI-YK--IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-E 212 (437)
T ss_pred HHHCCCCC-CC--CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc-C
Confidence 99999995 33 345899999999999999999999997543332 134789999999999999999999988 9
Q ss_pred CccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCc--------HHHHHHHHHcChhhhh
Q 009344 224 SVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGH--------SNLAALLREHGVESAK 294 (537)
Q Consensus 224 ~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~--------~~i~~~L~~~g~~~~~ 294 (537)
++|.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+ .+++++|+++|++...
T Consensus 213 DIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G-AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~ 290 (437)
T PHA02795 213 DINQLDAGGRTLLYRAIYAGYIDLVSWLLENG-ANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC 290 (437)
T ss_pred CcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999999999998 9999999999999999999884 6999999999986644
No 44
>PF13962 PGG: Domain of unknown function
Probab=99.93 E-value=1.6e-25 Score=185.89 Aligned_cols=112 Identities=33% Similarity=0.501 Sum_probs=95.4
Q ss_pred HhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCCCCCCCccccCCCCcccccccCCc-cchhHhhhhHHHHHHHHHHHHHHH
Q 009344 343 AEGLNNAINSTTVVAVLIATIAFAAIFQVPGQFVDKPEEAVDGVALGEAHVSQKP-AFIIFFVFDSIALFISLAVVVVQT 421 (537)
Q Consensus 343 ~~~l~~~~~~~~~va~liatvtf~a~~~~Pgg~~~~~~~~~~~~~~g~~~~~~~~-~f~~f~~~~~~a~~~s~~~~~~~~ 421 (537)
+||++++++++++||+|||||||||+||||||||+++ + +.|.|++.+++ .|.+|+++|++||++|++++++++
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~-----~-~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~ 74 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDD-----D-DAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLI 74 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-----c-CCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3688899999999999999999999999999999874 1 56999999887 999999999999999999999888
Q ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009344 422 SVVVIESKAKRQLMAVINKLMWLACVLISVAYLAMSFIV 460 (537)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~af~~~~~~v 460 (537)
+.+....+.....+.....+||+++.+|++||++|+|+|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 75 SGLDDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 423112233344567778899999999999999999975
No 45
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.92 E-value=5.7e-25 Score=223.14 Aligned_cols=247 Identities=30% Similarity=0.396 Sum_probs=214.2
Q ss_pred CcHhHHHHHcCCHHHHHHHHccCchhh-------HhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCC
Q 009344 23 DTALHSAARAGNLDEVKDILTGTEEAK-------LKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARN 95 (537)
Q Consensus 23 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~-------~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 95 (537)
++-|..|++.|+.+.+..+|+...... -..-.+.+|..|.|+||.|+.+|+.++++.|++.. ..+++.+..
T Consensus 4 ~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~e--a~ldl~d~k 81 (854)
T KOG0507|consen 4 KQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYE--ALLDLCDTK 81 (854)
T ss_pred hhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcch--hhhhhhhcc
Confidence 456788999999999999998643210 11235667889999999999999999999999965 667778899
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC
Q 009344 96 GFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNG 175 (537)
Q Consensus 96 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 175 (537)
|.+|||+|+.+|+.++++.++.....++ ..+..|.||||.|+..|+.+++.+|++++++ ..+.+..+.|+|..|++.|
T Consensus 82 g~~plhlaaw~g~~e~vkmll~q~d~~n-a~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qfg 159 (854)
T KOG0507|consen 82 GILPLHLAAWNGNLEIVKMLLLQTDILN-AVNIENETPLHLAAQHGHLEVVFYLLKKNAD-PFIRNNSKETVLDLASRFG 159 (854)
T ss_pred CcceEEehhhcCcchHHHHHHhcccCCC-cccccCcCccchhhhhcchHHHHHHHhcCCC-ccccCcccccHHHHHHHhh
Confidence 9999999999999999999999985444 4478999999999999999999999999999 5778899999999999999
Q ss_pred cHHHHHHHHhcCCccc-------cccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHH
Q 009344 176 RLEVLKTLLAADSVIA-------IRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIV 248 (537)
Q Consensus 176 ~~~~v~~Ll~~~~~~~-------~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv 248 (537)
..++++.|++..-... ..++-.+.+|||.|+++|+.++++.|++.+ .++|...++| |+||-|+..|..++|
T Consensus 160 r~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag-~din~~t~~g-talheaalcgk~evv 237 (854)
T KOG0507|consen 160 RAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAG-FDINYTTEDG-TALHEAALCGKAEVV 237 (854)
T ss_pred hhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcC-CCcccccccc-hhhhhHhhcCcchhh
Confidence 9999999998632211 123456789999999999999999999988 9999888877 999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCCCHHHHHHHc
Q 009344 249 RLLLANSETNLNGVNRTGETALDTAEKT 276 (537)
Q Consensus 249 ~~Ll~~~~~~~~~~d~~g~T~L~~A~~~ 276 (537)
++|++.| .+....|.+|.|+|++....
T Consensus 238 r~ll~~g-in~h~~n~~~qtaldil~d~ 264 (854)
T KOG0507|consen 238 RFLLEIG-INTHIKNQHGQTALDIIIDL 264 (854)
T ss_pred hHHHhhc-cccccccccchHHHHHHHhc
Confidence 9999998 89999999999999998765
No 46
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.92 E-value=1.5e-25 Score=195.45 Aligned_cols=256 Identities=22% Similarity=0.256 Sum_probs=209.8
Q ss_pred cHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHH
Q 009344 24 TALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIA 103 (537)
Q Consensus 24 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A 103 (537)
..+..++..|-.+--..+.... -.-++..|+.-+-.+.+.|+.+++..+..-.+.+ ..-.+.+|+++++.+
T Consensus 33 a~~~~~~~m~~t~p~~~l~~~~--------s~~~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~-~~~t~p~g~~~~~v~ 103 (296)
T KOG0502|consen 33 AELFEQVEMGTTEPRCALTAEI--------SALRNALGESLLTVAVRSGNSDVAVQSAQLDPDA-IDETDPEGWSALLVA 103 (296)
T ss_pred HHHHHHhhccccchhHHHHHHH--------HHHHHhcCCcccchhhhcCCcHHHHHhhccCCCC-CCCCCchhhhhhhhc
Confidence 4677777777666555555322 1224567888888899999999998888755433 333566699999999
Q ss_pred HHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHH
Q 009344 104 AKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTL 183 (537)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 183 (537)
+-.|+.+.+..++..+...+. ++.-+++|+.+++-..+.+.+..+.+. ..+..|+.|.|||.||+..|+..+|++|
T Consensus 104 ap~~s~~k~sttltN~~rgne-vs~~p~s~~slsVhql~L~~~~~~~~n---~VN~~De~GfTpLiWAaa~G~i~vV~fL 179 (296)
T KOG0502|consen 104 APCGSVDKVSTTLTNGARGNE-VSLMPWSPLSLSVHQLHLDVVDLLVNN---KVNACDEFGFTPLIWAAAKGHIPVVQFL 179 (296)
T ss_pred CCCCCcceeeeeecccccCCc-cccccCChhhHHHHHHHHHHHHHHhhc---cccCccccCchHhHHHHhcCchHHHHHH
Confidence 999999999999988877654 477899999999988888877766654 3567899999999999999999999999
Q ss_pred HhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCC
Q 009344 184 LAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVN 263 (537)
Q Consensus 184 l~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d 263 (537)
++.|+++... .+...++|.+|+..|..++|+.||..+ .++|..|.+|-|||-+|++.++.++++.|+..| ++++..+
T Consensus 180 L~~GAdp~~l-gk~resALsLAt~ggytdiV~lLL~r~-vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sG-Ad~t~e~ 256 (296)
T KOG0502|consen 180 LNSGADPDAL-GKYRESALSLATRGGYTDIVELLLTRE-VDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSG-ADVTQED 256 (296)
T ss_pred HHcCCChhhh-hhhhhhhHhHHhcCChHHHHHHHHhcC-CCcceeccCCCceeeeeecCChHHHHHHHHhcC-CCccccc
Confidence 9999988765 677889999999999999999999987 899999999999999999999999999999888 9999999
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhc
Q 009344 264 RTGETALDTAEKTGHSNLAALLREHGVESAKNM 296 (537)
Q Consensus 264 ~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~ 296 (537)
..|++++++|+..|+. +++..++.-+....+.
T Consensus 257 dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~ 288 (296)
T KOG0502|consen 257 DSGYWIMDLAVALGYR-IVQQVIEKHALKLCQD 288 (296)
T ss_pred ccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhc
Confidence 9999999999999988 6666555555444433
No 47
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.92 E-value=2.8e-24 Score=237.94 Aligned_cols=230 Identities=19% Similarity=0.189 Sum_probs=144.3
Q ss_pred ccccccCCCCCCcHhH-HHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcC---CHHHHHHHHHcCCcc
Q 009344 12 KMTKQLTGKRDDTALH-SAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYG---HVDLVAEMIKCYDLA 87 (537)
Q Consensus 12 ~~~~~~~~~~g~t~Lh-~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g---~~~iv~~Ll~~~~~~ 87 (537)
..+.+..|..|.|||| .|+..++.++++.|++.+. .+..|+||||.|+..+ ..+++..+.+.....
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----------~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~ 111 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----------RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKS 111 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----------CCCcChHHHHHHHhccHHHHHHHHHHHhhccccc
Confidence 5678888999999999 8889999999999998764 4678999999998722 223444444433111
Q ss_pred c--------ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 009344 88 D--------AGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITI 159 (537)
Q Consensus 88 ~--------~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~ 159 (537)
+ ....+..|.||||+|+.+|+.++++.|++++++++...+ +.... ... ...
T Consensus 112 ~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~--~~~~~-----------------~~~--~~~ 170 (743)
T TIGR00870 112 GPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARAC--GDFFV-----------------KSQ--GVD 170 (743)
T ss_pred CchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcC--Cchhh-----------------cCC--CCC
Confidence 0 112235699999999999999999999999998764311 10000 000 001
Q ss_pred cCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCC---------CHHHHHHHHHhC--CCCc---
Q 009344 160 SRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQ---------NIEVVQELIKAE--PASV--- 225 (537)
Q Consensus 160 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g---------~~~~v~~Ll~~~--~~~i--- 225 (537)
....|.||||.|+..|+.++++.|+++++++... |..|+||||+|+..+ ...+.+++++.+ ..+.
T Consensus 171 ~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~-d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el 249 (743)
T TIGR00870 171 SFYHGESPLNAAACLGSPSIVALLSEDPADILTA-DSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKEL 249 (743)
T ss_pred cccccccHHHHHHHhCCHHHHHHHhcCCcchhhH-hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhh
Confidence 1234666777777777777777776666655433 666677777766654 122333343332 0122
Q ss_pred -cccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHH
Q 009344 226 -NMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAE 274 (537)
Q Consensus 226 -~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~ 274 (537)
+..|.+|.||||+|+..|+.+++++|++.+ ..........+.|.+.+.
T Consensus 250 ~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~-~~~kk~~a~~~~~~~~~~ 298 (743)
T TIGR00870 250 EVILNHQGLTPLKLAAKEGRIVLFRLKLAIK-YKQKKFVAWPNGQQLLSL 298 (743)
T ss_pred hhhcCCCCCCchhhhhhcCCccHHHHHHHHH-HhcceeeccCcchHhHhh
Confidence 456777777777777777777777777643 222223334444554443
No 48
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91 E-value=3.7e-24 Score=186.79 Aligned_cols=241 Identities=24% Similarity=0.315 Sum_probs=200.3
Q ss_pred ccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCC
Q 009344 16 QLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARN 95 (537)
Q Consensus 16 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 95 (537)
..++..|+.-+-.|.+.|+.+.+...+.-.++. ....+..|.++++.|+-.|+.+.+..++..+ ...+..+..
T Consensus 56 ~~~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~-----~~~t~p~g~~~~~v~ap~~s~~k~sttltN~--~rgnevs~~ 128 (296)
T KOG0502|consen 56 ALRNALGESLLTVAVRSGNSDVAVQSAQLDPDA-----IDETDPEGWSALLVAAPCGSVDKVSTTLTNG--ARGNEVSLM 128 (296)
T ss_pred HHHHhcCCcccchhhhcCCcHHHHHhhccCCCC-----CCCCCchhhhhhhhcCCCCCcceeeeeeccc--ccCCccccc
Confidence 346778888999999999999888888776652 5556677999999999999999998888866 555667778
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC
Q 009344 96 GFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNG 175 (537)
Q Consensus 96 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 175 (537)
+++|+.+++...+.+.+..+.+.. .+.+|..|.|||.+|+..|++++|++||+.|++ +........++|.+|++.|
T Consensus 129 p~s~~slsVhql~L~~~~~~~~n~---VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd-p~~lgk~resALsLAt~gg 204 (296)
T KOG0502|consen 129 PWSPLSLSVHQLHLDVVDLLVNNK---VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD-PDALGKYRESALSLATRGG 204 (296)
T ss_pred cCChhhHHHHHHHHHHHHHHhhcc---ccCccccCchHhHHHHhcCchHHHHHHHHcCCC-hhhhhhhhhhhHhHHhcCC
Confidence 889999999888888777766653 335588999999999999999999999999888 4666777788999999999
Q ss_pred cHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcC
Q 009344 176 RLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANS 255 (537)
Q Consensus 176 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~ 255 (537)
..++|+.|+.++++++.. |-+|.|||.+|+..++.++++.|+..| ++++..|..|++++.+|+..|+. +|+..++..
T Consensus 205 ytdiV~lLL~r~vdVNvy-DwNGgTpLlyAvrgnhvkcve~Ll~sG-Ad~t~e~dsGy~~mdlAValGyr-~Vqqvie~h 281 (296)
T KOG0502|consen 205 YTDIVELLLTREVDVNVY-DWNGGTPLLYAVRGNHVKCVESLLNSG-ADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKH 281 (296)
T ss_pred hHHHHHHHHhcCCCccee-ccCCCceeeeeecCChHHHHHHHHhcC-CCcccccccCCcHHHHHHHhhhH-HHHHHHHHH
Confidence 999999999999888766 889999999999999999999999888 89999999999999999999887 778777766
Q ss_pred CCCcccCCCCCCCHHH
Q 009344 256 ETNLNGVNRTGETALD 271 (537)
Q Consensus 256 ~~~~~~~d~~g~T~L~ 271 (537)
++.+.+|+.-.||+|
T Consensus 282 -~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 282 -ALKLCQDSEKRTPLH 296 (296)
T ss_pred -HHHHhhcccCCCCCC
Confidence 677777777777764
No 49
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90 E-value=1.1e-22 Score=226.70 Aligned_cols=179 Identities=23% Similarity=0.318 Sum_probs=161.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHH
Q 009344 92 KARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSA 171 (537)
Q Consensus 92 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A 171 (537)
.+.++.++||.||..|+.++++.|++.+.+++.. |..|.||||+|+..|+.++++.|+++|.+ .+..|.+|.||||+|
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~-d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-in~~d~~G~TpL~~A 598 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDIG-DSKGRTPLHIAASKGYEDCVLVLLKHACN-VHIRDANGNTALWNA 598 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcChHHHHHHHHhcCCC-CCCcCCCCCCHHHHH
Confidence 3445778999999999999999999999987754 88999999999999999999999999888 678899999999999
Q ss_pred HHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHH
Q 009344 172 ARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLL 251 (537)
Q Consensus 172 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~L 251 (537)
+..|+.++++.|++.+.... ...|.++||.|+.+|+.++++.|++.+ +++|.+|.+|+||||+|+..|+.+++++|
T Consensus 599 ~~~g~~~iv~~L~~~~~~~~---~~~~~~~L~~Aa~~g~~~~v~~Ll~~G-adin~~d~~G~TpLh~A~~~g~~~iv~~L 674 (823)
T PLN03192 599 ISAKHHKIFRILYHFASISD---PHAAGDLLCTAAKRNDLTAMKELLKQG-LNVDSEDHQGATALQVAMAEDHVDMVRLL 674 (823)
T ss_pred HHhCCHHHHHHHHhcCcccC---cccCchHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcHHHHHHH
Confidence 99999999999998765433 456789999999999999999999988 89999999999999999999999999999
Q ss_pred HhcCCCCcccCCCCC-CCHHHHHHHcC
Q 009344 252 LANSETNLNGVNRTG-ETALDTAEKTG 277 (537)
Q Consensus 252 l~~~~~~~~~~d~~g-~T~L~~A~~~~ 277 (537)
+++| ++++..|..| .||++++....
T Consensus 675 l~~G-Adv~~~~~~g~~t~~~l~~~~~ 700 (823)
T PLN03192 675 IMNG-ADVDKANTDDDFSPTELRELLQ 700 (823)
T ss_pred HHcC-CCCCCCCCCCCCCHHHHHHHHH
Confidence 9998 9999999998 89998876543
No 50
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.9e-23 Score=212.18 Aligned_cols=244 Identities=25% Similarity=0.331 Sum_probs=210.9
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCC-----------cccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCC
Q 009344 63 TALYVAAEYGHVDLVAEMIKCYD-----------LADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNT 131 (537)
Q Consensus 63 TpLh~A~~~g~~~iv~~Ll~~~~-----------~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 131 (537)
+=|.-|+..|+.+.|..|++... ....+..|.+|.|+||.|+.+|+.++++.|++..+-+... |..|.
T Consensus 5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~-d~kg~ 83 (854)
T KOG0507|consen 5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLC-DTKGI 83 (854)
T ss_pred hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhh-hccCc
Confidence 34778999999999999998542 2345678889999999999999999999999998876655 68999
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCH
Q 009344 132 TALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNI 211 (537)
Q Consensus 132 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 211 (537)
+|||+|+..|+.++++.++.++ +..+.....|.||||.|+.+|+.+++.+|++++.+.... |..+.|+|-+|++.|..
T Consensus 84 ~plhlaaw~g~~e~vkmll~q~-d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~-nns~~t~ldlA~qfgr~ 161 (854)
T KOG0507|consen 84 LPLHLAAWNGNLEIVKMLLLQT-DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIR-NNSKETVLDLASRFGRA 161 (854)
T ss_pred ceEEehhhcCcchHHHHHHhcc-cCCCcccccCcCccchhhhhcchHHHHHHHhcCCCcccc-CcccccHHHHHHHhhhh
Confidence 9999999999999999999998 447888889999999999999999999999999998766 89999999999999999
Q ss_pred HHHHHHHHhCC-------CCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHH
Q 009344 212 EVVQELIKAEP-------ASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAAL 284 (537)
Q Consensus 212 ~~v~~Ll~~~~-------~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~ 284 (537)
++++.|++..- ..-..++-.+-+|||+|+++|+.++++.|++.| .++|...+.| |+||.|+..|..+++.+
T Consensus 162 ~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag-~din~~t~~g-talheaalcgk~evvr~ 239 (854)
T KOG0507|consen 162 EVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAG-FDINYTTEDG-TALHEAALCGKAEVVRF 239 (854)
T ss_pred HHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcC-CCcccccccc-hhhhhHhhcCcchhhhH
Confidence 99999998620 112234566789999999999999999999998 9999988877 99999999999999999
Q ss_pred HHHcChhhhhhcCCCCCchHHHHHHHH
Q 009344 285 LREHGVESAKNMKPQNNPARELKQTVS 311 (537)
Q Consensus 285 L~~~g~~~~~~~~~~~~~~~~~~~~~~ 311 (537)
|++.|......+..+.+..+.+.+...
T Consensus 240 ll~~gin~h~~n~~~qtaldil~d~~~ 266 (854)
T KOG0507|consen 240 LLEIGINTHIKNQHGQTALDIIIDLQE 266 (854)
T ss_pred HHhhccccccccccchHHHHHHHhcch
Confidence 999999988887777665555544433
No 51
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89 E-value=7.8e-22 Score=219.76 Aligned_cols=179 Identities=26% Similarity=0.334 Sum_probs=160.9
Q ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHH
Q 009344 57 QNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHT 136 (537)
Q Consensus 57 ~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~ 136 (537)
.+..+.++||.||..|+.++++.|++.+ .+++..|..|.||||+|+..|+.++++.|++++++++.. |.+|.||||+
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G--~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~-d~~G~TpL~~ 597 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAK--LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR-DANGNTALWN 597 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCc-CCCCCCHHHH
Confidence 3445789999999999999999999987 788999999999999999999999999999999887654 8899999999
Q ss_pred HHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHH
Q 009344 137 AAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQE 216 (537)
Q Consensus 137 A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 216 (537)
|+..|+.++++.|++.+... ....|.++||.|+..|+.++++.|++++++++.. |.+|+||||+|+..|+.+++++
T Consensus 598 A~~~g~~~iv~~L~~~~~~~---~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~-d~~G~TpLh~A~~~g~~~iv~~ 673 (823)
T PLN03192 598 AISAKHHKIFRILYHFASIS---DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSE-DHQGATALQVAMAEDHVDMVRL 673 (823)
T ss_pred HHHhCCHHHHHHHHhcCccc---CcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCcHHHHHH
Confidence 99999999999999876542 2356789999999999999999999999988654 9999999999999999999999
Q ss_pred HHHhCCCCccccCCCC-ChHHHHHHHhC
Q 009344 217 LIKAEPASVNMVDTKG-NSPLHIATRKG 243 (537)
Q Consensus 217 Ll~~~~~~i~~~d~~G-~t~Lh~A~~~~ 243 (537)
|++++ ++++..|..| .||++++....
T Consensus 674 Ll~~G-Adv~~~~~~g~~t~~~l~~~~~ 700 (823)
T PLN03192 674 LIMNG-ADVDKANTDDDFSPTELRELLQ 700 (823)
T ss_pred HHHcC-CCCCCCCCCCCCCHHHHHHHHH
Confidence 99988 9999999888 89998886544
No 52
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.88 E-value=4e-22 Score=196.27 Aligned_cols=234 Identities=26% Similarity=0.368 Sum_probs=192.1
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChH
Q 009344 20 KRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDA 99 (537)
Q Consensus 20 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~ 99 (537)
....-.+..|+..|+.+-|+.|+..+.. .+..|.+|.|+||-+|...+.+||++|++.+ ++++..|..|+||
T Consensus 38 f~~sa~~l~A~~~~d~~ev~~ll~~ga~------~~~~n~DglTalhq~~id~~~e~v~~l~e~g--a~Vn~~d~e~wtP 109 (527)
T KOG0505|consen 38 FEDSAVFLEACSRGDLEEVRKLLNRGAS------PNLCNVDGLTALHQACIDDNLEMVKFLVENG--ANVNAQDNEGWTP 109 (527)
T ss_pred CCchHHHHhccccccHHHHHHHhccCCC------ccccCCccchhHHHHHhcccHHHHHHHHHhc--CCccccccccCCc
Confidence 3445577788899999999999998865 4788999999999999999999999999988 8999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC---c
Q 009344 100 FHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNG---R 176 (537)
Q Consensus 100 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g---~ 176 (537)
||.|+..|+..++++|++.++++... |..|..|+..|......++...-...... + +..+-... .
T Consensus 110 lhaaascg~~~i~~~li~~gA~~~av-Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi----------~-iea~R~~~e~~m 177 (527)
T KOG0505|consen 110 LHAAASCGYLNIVEYLIQHGANLLAV-NSDGNMPYDLAEDEATLDVLETEMARQGI----------D-IEAARKAEEQTM 177 (527)
T ss_pred chhhcccccHHHHHHHHHhhhhhhhc-cCCCCCccccccCcchhHHHHHHHHHhcc----------c-HHHHhhhhHHHH
Confidence 99999999999999999999998765 88888888887766555555444433221 1 11111111 1
Q ss_pred HHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCC
Q 009344 177 LEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSE 256 (537)
Q Consensus 177 ~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 256 (537)
.+-+...+..+...... +..|.|.||+|+.+|..++.++|++.+ .+++.+|.+|+||||.|+..|+.+++++|++++
T Consensus 178 l~D~~q~l~~G~~~d~~-~~rG~T~lHvAaa~Gy~e~~~lLl~ag-~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~g- 254 (527)
T KOG0505|consen 178 LDDARQWLNAGAELDAR-HARGATALHVAAANGYTEVAALLLQAG-YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHG- 254 (527)
T ss_pred HHHHHHHHhcccccccc-ccccchHHHHHHhhhHHHHHHHHHHhc-cCcccccccCCCcccHHHHhhhHhHHHHHHHhh-
Confidence 22234444566555554 445999999999999999999999998 999999999999999999999999999999998
Q ss_pred CCcccCCCCCCCHHHHHHHc
Q 009344 257 TNLNGVNRTGETALDTAEKT 276 (537)
Q Consensus 257 ~~~~~~d~~g~T~L~~A~~~ 276 (537)
++.+.....|.||+++|...
T Consensus 255 a~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 255 ADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred cccchhhhcCCCCccchhhh
Confidence 99999999999999998764
No 53
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.88 E-value=6e-23 Score=214.04 Aligned_cols=276 Identities=24% Similarity=0.291 Sum_probs=186.1
Q ss_pred cccccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCccccc
Q 009344 11 KKMTKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAG 90 (537)
Q Consensus 11 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ 90 (537)
+...+..+|+.|.+||..|+-.||..+|+.|+....+ +-...|..++|+|.+||..|..++|+.||..+ ++..
T Consensus 779 rganiehrdkkgf~plImaatagh~tvV~~llk~ha~-----veaQsdrtkdt~lSlacsggr~~vvelLl~~g--anke 851 (2131)
T KOG4369|consen 779 RGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHAD-----VEAQSDRTKDTMLSLACSGGRTRVVELLLNAG--ANKE 851 (2131)
T ss_pred hcccccccccccchhhhhhcccCchHHHHHHHhhhhh-----hhhhcccccCceEEEecCCCcchHHHHHHHhh--cccc
Confidence 3455666777777777777777777777777766543 22345666777777777777777777777766 5555
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccC-CCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHH
Q 009344 91 IKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTV-DLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALH 169 (537)
Q Consensus 91 ~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh 169 (537)
.++-...|||.+|...|..++++.|+..+.+++... ...|.+||.+|..+|+.+.++.|++.+.++......+-+|+|.
T Consensus 852 hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTalt 931 (2131)
T KOG4369|consen 852 HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALT 931 (2131)
T ss_pred ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhcccccccccccee
Confidence 666667777777777777777777777776665433 2346677777777777777777777777765555556667777
Q ss_pred HHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCcccc--CCCCChHHHHHHHhCCHHH
Q 009344 170 SAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMV--DTKGNSPLHIATRKGREQI 247 (537)
Q Consensus 170 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~--d~~G~t~Lh~A~~~~~~~i 247 (537)
+|+..|+.+++..||...++...+ -+.|.|||+-++..|.+++-+.||..+ +|.|.- -....|+|-+++..|+.+.
T Consensus 932 la~fqgr~evv~lLLa~~anvehR-aktgltplme~AsgGyvdvg~~li~~g-ad~nasPvp~T~dtalti~a~kGh~kf 1009 (2131)
T KOG4369|consen 932 LALFQGRPEVVFLLLAAQANVEHR-AKTGLTPLMEMASGGYVDVGNLLIAAG-ADTNASPVPNTWDTALTIPANKGHTKF 1009 (2131)
T ss_pred eccccCcchHHHHHHHHhhhhhhh-cccCCcccchhhcCCccccchhhhhcc-cccccCCCCCcCCccceeecCCCchhh
Confidence 777777777777777766655544 667777777777777777777777766 544432 1233356666666666666
Q ss_pred HHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhc
Q 009344 248 VRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNM 296 (537)
Q Consensus 248 v~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~ 296 (537)
++.|+.. ++.+...|++|+|+|-+|+..|....+.+|++++++.....
T Consensus 1010 v~~lln~-~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qd 1057 (2131)
T KOG4369|consen 1010 VPKLLNG-DATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQD 1057 (2131)
T ss_pred hHHhhCC-ccceecccCCCCcccchhccCCccccchHHhhcccChhhhh
Confidence 6666533 35666677777777777777777777777777766655443
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=1.1e-21 Score=183.59 Aligned_cols=161 Identities=29% Similarity=0.441 Sum_probs=147.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHH-----cCcHHHHHHHHhcCCccccccCCCCch
Q 009344 126 VDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAAR-----NGRLEVLKTLLAADSVIAIRTDKKGQT 200 (537)
Q Consensus 126 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~-----~g~~~~v~~Ll~~~~~~~~~~d~~g~t 200 (537)
.|.+|+|+||||+.++++++|+.||+.+....+..+.-|+||+++++. ..+.++|..|+..+ +++.+-...|+|
T Consensus 264 aDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQT 342 (452)
T KOG0514|consen 264 ADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQT 342 (452)
T ss_pred hcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcch
Confidence 488999999999999999999999999998889999999999999885 34678899999875 445555778999
Q ss_pred HHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHH
Q 009344 201 ALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSN 280 (537)
Q Consensus 201 ~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~ 280 (537)
+|++|+.+|+.++|+.||..+ +++|.+|.+|-|+|+.|+.+|+.+|+++||....+|+...|.+|-|+|.+|...|+.|
T Consensus 343 ALMLAVSHGr~d~vk~LLacg-AdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~e 421 (452)
T KOG0514|consen 343 ALMLAVSHGRVDMVKALLACG-ADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHRE 421 (452)
T ss_pred hhhhhhhcCcHHHHHHHHHcc-CCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchH
Confidence 999999999999999999877 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc
Q 009344 281 LAALLREH 288 (537)
Q Consensus 281 i~~~L~~~ 288 (537)
|.-+|-.+
T Consensus 422 Ia~mlYa~ 429 (452)
T KOG0514|consen 422 IAVMLYAH 429 (452)
T ss_pred HHHHHHHH
Confidence 98887654
No 55
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.86 E-value=1.6e-22 Score=210.88 Aligned_cols=261 Identities=21% Similarity=0.279 Sum_probs=236.6
Q ss_pred CCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCC
Q 009344 18 TGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGF 97 (537)
Q Consensus 18 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~ 97 (537)
.|+.+||+|-+||..|+.++|+.||..+.+ -..+|....|||.+|...|..+++..|+..|...+-..-.+.|-
T Consensus 820 sdrtkdt~lSlacsggr~~vvelLl~~gan------kehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgi 893 (2131)
T KOG4369|consen 820 SDRTKDTMLSLACSGGRTRVVELLLNAGAN------KEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGI 893 (2131)
T ss_pred cccccCceEEEecCCCcchHHHHHHHhhcc------ccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCc
Confidence 578899999999999999999999999876 33567788999999999999999999999985555555567899
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcH
Q 009344 98 DAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRL 177 (537)
Q Consensus 98 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~ 177 (537)
.||.+|..+||.+.++.|++.+.+++.....+.+|+|-+|+..|+.+++..||..... ...+-..|.|||.-++..|.+
T Consensus 894 sPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~an-vehRaktgltplme~AsgGyv 972 (2131)
T KOG4369|consen 894 SPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQAN-VEHRAKTGLTPLMEMASGGYV 972 (2131)
T ss_pred chhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhh-hhhhcccCCcccchhhcCCcc
Confidence 9999999999999999999999999999999999999999999999999999998877 567788899999999999999
Q ss_pred HHHHHHHhcCCcccccc-CCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCC
Q 009344 178 EVLKTLLAADSVIAIRT-DKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSE 256 (537)
Q Consensus 178 ~~v~~Ll~~~~~~~~~~-d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~ 256 (537)
++-+.|+..|++.+... ...-.|+|-+++..|+...++.|+... +.+..++++|+|+|.+|+..|....+..|++++
T Consensus 973 dvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~-atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~- 1050 (2131)
T KOG4369|consen 973 DVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGD-ATVRVPNKKGCTVLWLASAGGALSSCPILVSSV- 1050 (2131)
T ss_pred ccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCc-cceecccCCCCcccchhccCCccccchHHhhcc-
Confidence 99999999999876542 234568999999999999999999765 889999999999999999999999999999998
Q ss_pred CCcccCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 009344 257 TNLNGVNRTGETALDTAEKTGHSNLAALLRE 287 (537)
Q Consensus 257 ~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~ 287 (537)
+|++..|+..++++..|.+.|+.+||++...
T Consensus 1051 ad~d~qdnr~~S~~maafRKgh~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1051 ADADQQDNRTNSRTMAAFRKGHFAIVKKMVP 1081 (2131)
T ss_pred cChhhhhcccccccHHHHHhchhheeccccC
Confidence 9999999999999999999999998887654
No 56
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84 E-value=1.3e-20 Score=176.57 Aligned_cols=165 Identities=26% Similarity=0.371 Sum_probs=148.7
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHc-----CCHHHHHHHHHcCCCcccccCCC
Q 009344 89 AGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQ-----GHVEVLNFLIEAESSLITISRSN 163 (537)
Q Consensus 89 ~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~-----g~~~iv~~Ll~~~~~~~~~~~~~ 163 (537)
+|+.|.+|+|+||+|+.++|+++|+.|++.+.......|.-|.||+++++.. .+.++|..|+..|.- .......
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnV-NaKAsQ~ 339 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDV-NAKASQH 339 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCc-chhhhhh
Confidence 5678999999999999999999999999998777767788999999999864 468899999987654 3344567
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhC
Q 009344 164 GKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKG 243 (537)
Q Consensus 164 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~ 243 (537)
|.|+|++|+.+|+.++|+.||..+++++.+ |.+|.|+|++|+++|+.|+++.||.....++...|.+|-|+|.+|...|
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQ-DdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleag 418 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQ-DDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAG 418 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccc-cCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcC
Confidence 999999999999999999999999998876 9999999999999999999999999988999999999999999999999
Q ss_pred CHHHHHHHHhcC
Q 009344 244 REQIVRLLLANS 255 (537)
Q Consensus 244 ~~~iv~~Ll~~~ 255 (537)
+.+|.-+|..+-
T Consensus 419 h~eIa~mlYa~~ 430 (452)
T KOG0514|consen 419 HREIAVMLYAHM 430 (452)
T ss_pred chHHHHHHHHHH
Confidence 999999888653
No 57
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.82 E-value=3.6e-18 Score=176.48 Aligned_cols=219 Identities=23% Similarity=0.251 Sum_probs=147.9
Q ss_pred CCcHhHHHHHcCCHHHHHHHHccCchh---hHhhhcccccCCCCCHHHHHHH---cCCHHHHHHHHHcCCccccc---cc
Q 009344 22 DDTALHSAARAGNLDEVKDILTGTEEA---KLKELLPKQNQSGETALYVAAE---YGHVDLVAEMIKCYDLADAG---IK 92 (537)
Q Consensus 22 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~---~~~~ll~~~n~~g~TpLh~A~~---~g~~~iv~~Ll~~~~~~~~~---~~ 92 (537)
...++..|...|.++....++..+... ....-++++...|+|.||.|.. .++.++++.|++..+....+ ..
T Consensus 101 d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~e 180 (782)
T KOG3676|consen 101 DRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSE 180 (782)
T ss_pred chhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhH
Confidence 346777888888888777776654221 1112356667778888888876 34568888888865421111 12
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHH
Q 009344 93 ARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAA 172 (537)
Q Consensus 93 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~ 172 (537)
...|+||||+|+.+.+.++|+.|++.+++++...-..=..| .+..-.+ + ...-.-.=.-|..||.+||
T Consensus 181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~-------~dqk~~r----k-~T~Y~G~~YfGEyPLSfAA 248 (782)
T KOG3676|consen 181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCP-------DDQKASR----K-STNYTGYFYFGEYPLSFAA 248 (782)
T ss_pred hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCc-------ccccccc----c-ccCCcceeeeccCchHHHH
Confidence 34588888888888888888888888877654210000000 0000000 0 0000001134788899998
Q ss_pred HcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCC--ccccCCCCChHHHHHHHhCCHHHHHH
Q 009344 173 RNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPAS--VNMVDTKGNSPLHIATRKGREQIVRL 250 (537)
Q Consensus 173 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--i~~~d~~G~t~Lh~A~~~~~~~iv~~ 250 (537)
.-++.+++++|+++++++..+ |.+|+|.||+.+.+-..++..++++.+ +. ...+|.+|-|||-+|++-|+.++++.
T Consensus 249 C~nq~eivrlLl~~gAd~~aq-DS~GNTVLH~lVi~~~~~My~~~L~~g-a~~l~~v~N~qgLTPLtLAaklGk~emf~~ 326 (782)
T KOG3676|consen 249 CTNQPEIVRLLLAHGADPNAQ-DSNGNTVLHMLVIHFVTEMYDLALELG-ANALEHVRNNQGLTPLTLAAKLGKKEMFQH 326 (782)
T ss_pred HcCCHHHHHHHHhcCCCCCcc-ccCCChHHHHHHHHHHHHHHHHHHhcC-CCccccccccCCCChHHHHHHhhhHHHHHH
Confidence 888999999999888887765 888999999888888888888888877 55 67788888899999999999998888
Q ss_pred HHhc
Q 009344 251 LLAN 254 (537)
Q Consensus 251 Ll~~ 254 (537)
+++.
T Consensus 327 ile~ 330 (782)
T KOG3676|consen 327 ILER 330 (782)
T ss_pred HHHh
Confidence 8887
No 58
>PHA02741 hypothetical protein; Provisional
Probab=99.82 E-value=2.5e-19 Score=161.20 Aligned_cols=132 Identities=23% Similarity=0.397 Sum_probs=109.7
Q ss_pred ccCCCCCcHHHHHHHcCcHHHHHHHHhc------CCccccccCCCCchHHHHHHhCCC----HHHHHHHHHhCCCCcccc
Q 009344 159 ISRSNGKTALHSAARNGRLEVLKTLLAA------DSVIAIRTDKKGQTALHMAVKGQN----IEVVQELIKAEPASVNMV 228 (537)
Q Consensus 159 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~------~~~~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~~~i~~~ 228 (537)
..+..|.||||+|+..|+.++++.|+.. +.+. ..+|..|+||||+|+..|+ .+++++|++.+ +++|.+
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g-adin~~ 93 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG-ADINAQ 93 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC-CCCCCC
Confidence 4566788888888888888888887542 2333 3458889999999999888 57888888876 888988
Q ss_pred CC-CCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhh
Q 009344 229 DT-KGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVES 292 (537)
Q Consensus 229 d~-~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~ 292 (537)
|. +|+||||+|+..++.+++++|+...+++++..|..|.||||+|...++.+++++|++.++..
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 85 89999999999999999999998644899999999999999999999999999999887653
No 59
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.81 E-value=3.3e-19 Score=175.80 Aligned_cols=224 Identities=25% Similarity=0.379 Sum_probs=182.8
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCH
Q 009344 64 ALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHV 143 (537)
Q Consensus 64 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~ 143 (537)
.+.-|+..|..+-|+.|+..+ .+.+..+.+|.|+||.|+...+.+|+++|++++.+++.. |..++||||.|+..|+.
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~g--a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~-d~e~wtPlhaaascg~~ 119 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRG--ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQ-DNEGWTPLHAAASCGYL 119 (527)
T ss_pred HHHhccccccHHHHHHHhccC--CCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccc-ccccCCcchhhcccccH
Confidence 466788999999999999977 677899999999999999999999999999999998866 88999999999999999
Q ss_pred HHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCC---CHHHHHHHHHh
Q 009344 144 EVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQ---NIEVVQELIKA 220 (537)
Q Consensus 144 ~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g---~~~~v~~Ll~~ 220 (537)
.++++|+.++++. ...+.+|..|+..+...-..+++..-.... |-+ +-.+-... -.+-+...+..
T Consensus 120 ~i~~~li~~gA~~-~avNsdg~~P~dl~e~ea~~~~l~~~~~r~----------gi~-iea~R~~~e~~ml~D~~q~l~~ 187 (527)
T KOG0505|consen 120 NIVEYLIQHGANL-LAVNSDGNMPYDLAEDEATLDVLETEMARQ----------GID-IEAARKAEEQTMLDDARQWLNA 187 (527)
T ss_pred HHHHHHHHhhhhh-hhccCCCCCccccccCcchhHHHHHHHHHh----------ccc-HHHHhhhhHHHHHHHHHHHHhc
Confidence 9999999999984 556778888988876665555555444321 111 11111111 11223344444
Q ss_pred CCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCC
Q 009344 221 EPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQN 300 (537)
Q Consensus 221 ~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~ 300 (537)
+ ...+..+..|-|.||+|+.+|..++.++|++.+ .+++.+|.+|+||||.|+..|..++.++|+++|++.......+.
T Consensus 188 G-~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag-~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~ 265 (527)
T KOG0505|consen 188 G-AELDARHARGATALHVAAANGYTEVAALLLQAG-YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGE 265 (527)
T ss_pred c-ccccccccccchHHHHHHhhhHHHHHHHHHHhc-cCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCC
Confidence 4 778888888999999999999999999999998 89999999999999999999999999999999999887777776
Q ss_pred CchH
Q 009344 301 NPAR 304 (537)
Q Consensus 301 ~~~~ 304 (537)
.|.+
T Consensus 266 ~p~d 269 (527)
T KOG0505|consen 266 TPLD 269 (527)
T ss_pred CCcc
Confidence 6643
No 60
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.81 E-value=3.8e-19 Score=159.26 Aligned_cols=134 Identities=22% Similarity=0.326 Sum_probs=85.6
Q ss_pred cCCCCCcHHHHHHHcCcH----HHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHH---HHHHHHhCCCCccccC-CC
Q 009344 160 SRSNGKTALHSAARNGRL----EVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEV---VQELIKAEPASVNMVD-TK 231 (537)
Q Consensus 160 ~~~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~---v~~Ll~~~~~~i~~~d-~~ 231 (537)
.+.++.+++|.|++.|+. +++++|.+.+.... ..|..|+||||+|+.+|+.+. +++|++.+ +++|.+| ..
T Consensus 16 ~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~-~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-adin~~d~~~ 93 (166)
T PHA02743 16 IDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLH-RYDHHGRQCTHMVAWYDRANAVMKIELLVNMG-ADINARELGT 93 (166)
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhh-ccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC-CCCCCCCCCC
Confidence 344556666667766665 34444555554433 336667777777776665443 56666665 6677766 36
Q ss_pred CChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhh
Q 009344 232 GNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKN 295 (537)
Q Consensus 232 G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~ 295 (537)
|+||||+|+..++.+++++|++..+++++..|..|.||||+|+..++.+++++|+++|++....
T Consensus 94 g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~ 157 (166)
T PHA02743 94 GNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDP 157 (166)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 7777777777777777777775323677777777777777777777777777777777665443
No 61
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.80 E-value=6.9e-19 Score=157.60 Aligned_cols=138 Identities=20% Similarity=0.282 Sum_probs=102.2
Q ss_pred CCCCChHHHHHHHcCCH----HHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHH---HHHHHHhcCCccccccC-CCC
Q 009344 127 DLTNTTALHTAAMQGHV----EVLNFLIEAESSLITISRSNGKTALHSAARNGRLE---VLKTLLAADSVIAIRTD-KKG 198 (537)
Q Consensus 127 d~~g~t~L~~A~~~g~~----~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~---~v~~Ll~~~~~~~~~~d-~~g 198 (537)
+..+.+++|.|++.|+. +++++|++.+.. .+..|.+|+||||+|+..|+.+ ++++|++.++++... | ..|
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~-~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~-d~~~g 94 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGDGHL-LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINAR-ELGTG 94 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchh-hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCC-CCCCC
Confidence 44566677777777776 444455555554 4556777888888888777654 367888888776654 4 578
Q ss_pred chHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCC
Q 009344 199 QTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGE 267 (537)
Q Consensus 199 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~ 267 (537)
.||||+|+..++.+++++|+...+.+++.+|..|+||||+|+..++.+++++|++++ ++++.++..|.
T Consensus 95 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g-a~~~~~~~~~~ 162 (166)
T PHA02743 95 NTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANG-AVCDDPLSIGL 162 (166)
T ss_pred CcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcccCCc
Confidence 888888888888888888885333888888888888888888888888888888887 78887777664
No 62
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.80 E-value=3.9e-18 Score=164.60 Aligned_cols=154 Identities=10% Similarity=0.095 Sum_probs=125.6
Q ss_pred CCCCC-hHHHHHHHcCCHHHHHHHHHcCCCccccc----CCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchH
Q 009344 127 DLTNT-TALHTAAMQGHVEVLNFLIEAESSLITIS----RSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTA 201 (537)
Q Consensus 127 d~~g~-t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~----~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~ 201 (537)
|..|. ++||.|+..|+.+++++|+++|+++ +.. +..|.||||+|+..|+.+++++|+++|+++....+..|.||
T Consensus 29 d~~~~~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~Tp 107 (300)
T PHA02884 29 NKICIANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITP 107 (300)
T ss_pred CcCCCCHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCH
Confidence 44444 5667777778889999999988874 443 45799999999999999999999999988876545679999
Q ss_pred HHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHH
Q 009344 202 LHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNL 281 (537)
Q Consensus 202 Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i 281 (537)
||+|+..++.+++++|++.+ ++++.+|.+|.||||+|+..++.+++..+... ..+..+.+|++.+ ++.++
T Consensus 108 Lh~Aa~~~~~eivklLL~~G-Adin~kd~~G~TpL~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---~n~ei 177 (300)
T PHA02884 108 LYISVLHGCLKCLEILLSYG-ADINIQTNDMVTPIELALMICNNFLAFMICDN------EISNFYKHPKKIL---INFDI 177 (300)
T ss_pred HHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC------cccccccChhhhh---ccHHH
Confidence 99999999999999999987 99999999999999999998888887666422 2566778888875 46899
Q ss_pred HHHHHHcChh
Q 009344 282 AALLREHGVE 291 (537)
Q Consensus 282 ~~~L~~~g~~ 291 (537)
+++|+.++.-
T Consensus 178 ~~~Lish~vl 187 (300)
T PHA02884 178 LKILVSHFIL 187 (300)
T ss_pred HHHHHHHHHH
Confidence 9999999883
No 63
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.79 E-value=3.9e-19 Score=157.66 Aligned_cols=132 Identities=21% Similarity=0.331 Sum_probs=98.7
Q ss_pred cccCCCCCcHHHHHHHcCcHHHHHHHHhcC------CccccccCCCCchHHHHHHhCCCH---HHHHHHHHhCCCCcccc
Q 009344 158 TISRSNGKTALHSAARNGRLEVLKTLLAAD------SVIAIRTDKKGQTALHMAVKGQNI---EVVQELIKAEPASVNMV 228 (537)
Q Consensus 158 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~------~~~~~~~d~~g~t~Lh~A~~~g~~---~~v~~Ll~~~~~~i~~~ 228 (537)
+..|.+|.||||+|++.|+.. +.+...+ +.....+|..|+||||+|+..|+. +++++|++.+ .+++.+
T Consensus 11 ~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g-adin~~ 87 (154)
T PHA02736 11 SEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG-ADINGK 87 (154)
T ss_pred HhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC-CCcccc
Confidence 345566777777777777632 2221111 112233477888888888888876 4577888877 788888
Q ss_pred C-CCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhh
Q 009344 229 D-TKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVES 292 (537)
Q Consensus 229 d-~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~ 292 (537)
| .+|+||||+|+..++.+++++|+.+.+++++.+|..|.||||+|+..++.+++++|+++|++.
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 7 489999999999999999999887645888888999999999999988999999998888764
No 64
>PHA02741 hypothetical protein; Provisional
Probab=99.79 E-value=1.4e-18 Score=156.28 Aligned_cols=133 Identities=21% Similarity=0.291 Sum_probs=91.6
Q ss_pred cccccCCCCCHHHHHHHcCCHHHHHHHHHcC----CcccccccCCCCChHHHHHHHcCC----HHHHHHHHhcCCccccc
Q 009344 54 LPKQNQSGETALYVAAEYGHVDLVAEMIKCY----DLADAGIKARNGFDAFHIAAKEGH----LEVLKVLLAVYPELAMT 125 (537)
Q Consensus 54 l~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~----~~~~~~~~~~~g~t~Lh~A~~~g~----~~iv~~Ll~~~~~~~~~ 125 (537)
++.+|..|.||||+|++.|+.++|+.|+... .+.+++.+|..|.||||+|+..|+ .+++++|++.+++++..
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~ 93 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ 93 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence 4556777888888888888888888775421 124566777777777777777777 46677777777766544
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcC
Q 009344 126 VDLTNTTALHTAAMQGHVEVLNFLIEA-ESSLITISRSNGKTALHSAARNGRLEVLKTLLAAD 187 (537)
Q Consensus 126 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~ 187 (537)
.+..|.||||+|+..++.+++++|++. +.+ .+..|.+|.||||+|+..|+.++++.|++..
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~-~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGID-LHFCNADNKSPFELAIDNEDVAMMQILREIV 155 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence 223677777777777777777777764 444 4566667777777777777777777776654
No 65
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.79 E-value=1.8e-18 Score=145.95 Aligned_cols=146 Identities=29% Similarity=0.344 Sum_probs=133.0
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCH
Q 009344 132 TALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNI 211 (537)
Q Consensus 132 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 211 (537)
-.+.+|+..+....|+.||+..++..+.+|.+|+||||-|+.+|++++++.|+..+++.... ...|+||||-||+..+.
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~-T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAK-TNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccc-cccCccchhhhhcccch
Confidence 45678999999999999999999999999999999999999999999999999999987765 78899999999999999
Q ss_pred HHHHHHHHhCCCCccccCCCCChHHHHHHHhCCH-HHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcH
Q 009344 212 EVVQELIKAEPASVNMVDTKGNSPLHIATRKGRE-QIVRLLLANSETNLNGVNRTGETALDTAEKTGHS 279 (537)
Q Consensus 212 ~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~-~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~ 279 (537)
+++-.||+++ +++|.......||||+|+..++. ..+++|+.....++..+++.+.||+++|.+.+-.
T Consensus 144 ~va~~LLqhg-aDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s 211 (228)
T KOG0512|consen 144 EVAGRLLQHG-ADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMS 211 (228)
T ss_pred hHHHHHHhcc-CcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhh
Confidence 9999999998 99999999999999999988765 5678888777788999999999999999887643
No 66
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.78 E-value=8.8e-19 Score=155.39 Aligned_cols=142 Identities=15% Similarity=0.186 Sum_probs=101.7
Q ss_pred ccccccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHH---HHHHHHHcCCc
Q 009344 10 KKKMTKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVD---LVAEMIKCYDL 86 (537)
Q Consensus 10 ~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~---iv~~Ll~~~~~ 86 (537)
++....+.+|.+|.||||+|++.|+...+........+ ....++...|..|.||||+|+..|+.+ ++++|++.+
T Consensus 5 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~-~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g-- 81 (154)
T PHA02736 5 EEIIFASEPDIEGENILHYLCRNGGVTDLLAFKNAISD-ENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG-- 81 (154)
T ss_pred chhhHHHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcc-hhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC--
Confidence 34455667788899999999999984322211111111 112335567888999999999888764 677888876
Q ss_pred ccccccC-CCCChHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 009344 87 ADAGIKA-RNGFDAFHIAAKEGHLEVLKVLLAV-YPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESS 155 (537)
Q Consensus 87 ~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~ 155 (537)
.+.+.++ ..|.||||+|+..|+.+++++|++. +.+.+. .|..|.||||+|+..|+.+++++|++.+++
T Consensus 82 adin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~-~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~ 151 (154)
T PHA02736 82 ADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEI-LNYAFKTPYYVACERHDAKMMNILRAKGAQ 151 (154)
T ss_pred CCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcc-ccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 6777777 4788888888888888888888874 666543 377888888888888888888888887765
No 67
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.77 E-value=1.1e-17 Score=161.49 Aligned_cols=155 Identities=14% Similarity=0.172 Sum_probs=87.7
Q ss_pred cccccCCCCCH-HHHHHHcCCHHHHHHHHHcCCccccccc----CCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCC
Q 009344 54 LPKQNQSGETA-LYVAAEYGHVDLVAEMIKCYDLADAGIK----ARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDL 128 (537)
Q Consensus 54 l~~~n~~g~Tp-Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~----~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~ 128 (537)
+..+|..|.|+ ||.|+..|+.+++++|+++| ++++.+ +..|.||||+|+..|+.+++++|+++|++++...+.
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~G--AdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~ 102 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLG--ADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEE 102 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCC--CCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCC
Confidence 34455555543 34455556677777777666 455544 345666666666666666666666666666543344
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhC
Q 009344 129 TNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKG 208 (537)
Q Consensus 129 ~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 208 (537)
.|.||||+|+..|+.+++++|++.|++ .+..|.+|.||||+|+..++.+++..+... ..+..+.+|++++
T Consensus 103 ~g~TpLh~Aa~~~~~eivklLL~~GAd-in~kd~~G~TpL~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--- 172 (300)
T PHA02884 103 AKITPLYISVLHGCLKCLEILLSYGAD-INIQTNDMVTPIELALMICNNFLAFMICDN------EISNFYKHPKKIL--- 172 (300)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCChhHHHHhcCC------cccccccChhhhh---
Confidence 566666666666666666666666665 445556666666666666555554333311 1133444555543
Q ss_pred CCHHHHHHHHHh
Q 009344 209 QNIEVVQELIKA 220 (537)
Q Consensus 209 g~~~~v~~Ll~~ 220 (537)
++.++++.|+.+
T Consensus 173 ~n~ei~~~Lish 184 (300)
T PHA02884 173 INFDILKILVSH 184 (300)
T ss_pred ccHHHHHHHHHH
Confidence 234555555544
No 68
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.77 E-value=3.3e-19 Score=162.00 Aligned_cols=151 Identities=26% Similarity=0.426 Sum_probs=125.1
Q ss_pred HcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHH
Q 009344 139 MQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELI 218 (537)
Q Consensus 139 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 218 (537)
+.|+.-.|+.-|+......+..|..|.+|||+|++.|+..+++.|+.+|+.++.. +....||||+|+.+|+-++|+.|+
T Consensus 9 regna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~t-nmgddtplhlaaahghrdivqkll 87 (448)
T KOG0195|consen 9 REGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNST-NMGDDTPLHLAAAHGHRDIVQKLL 87 (448)
T ss_pred hcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccc-cCCCCcchhhhhhcccHHHHHHHH
Confidence 4444333444444444456788899999999999999999999999999887654 777889999999999999999999
Q ss_pred HhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhh
Q 009344 219 KAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVES 292 (537)
Q Consensus 219 ~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~ 292 (537)
+.. +++|..++.|+|||||||..|+.++.+-|+..| +.++..|++|.|||+.|...-...+.+.-.++|...
T Consensus 88 ~~k-advnavnehgntplhyacfwgydqiaedli~~g-a~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~ 159 (448)
T KOG0195|consen 88 SRK-ADVNAVNEHGNTPLHYACFWGYDQIAEDLISCG-AAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSP 159 (448)
T ss_pred HHh-cccchhhccCCCchhhhhhhcHHHHHHHHHhcc-ceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCC
Confidence 987 999999999999999999999999999999988 899999999999999886544444445545555443
No 69
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.76 E-value=6.1e-16 Score=160.18 Aligned_cols=188 Identities=32% Similarity=0.362 Sum_probs=142.6
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCC---------cccccCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCcccc----cC
Q 009344 98 DAFHIAAKEGHLEVLKVLLAVYP---------ELAMTVDLTNTTALHTAAMQ---GHVEVLNFLIEAESSLITI----SR 161 (537)
Q Consensus 98 t~Lh~A~~~g~~~iv~~Ll~~~~---------~~~~~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~----~~ 161 (537)
.++..|...+..+....++.... ++. .+...|.|.||.|..+ ++.++++.|++.-+..++. ..
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~-~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee 181 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLN-ERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE 181 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccc-cccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence 56666666666666555554431 111 1234567777777763 3456777777765544332 23
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhcCCcccccc--------C--------------CCCchHHHHHHhCCCHHHHHHHHH
Q 009344 162 SNGKTALHSAARNGRLEVLKTLLAADSVIAIRT--------D--------------KKGQTALHMAVKGQNIEVVQELIK 219 (537)
Q Consensus 162 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~--------d--------------~~g~t~Lh~A~~~g~~~~v~~Ll~ 219 (537)
..|.||||+|+.+.+.++|+.|++.++++..+. | .-|+.||-.||.-++.|++++|++
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 457777777777777777777777777655431 1 137899999999999999999999
Q ss_pred hCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCC--cccCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 009344 220 AEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETN--LNGVNRTGETALDTAEKTGHSNLAALLREH 288 (537)
Q Consensus 220 ~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~--~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~ 288 (537)
.+ +|++.+|.+|||.||..+.+-..++.+++++.+ ++ ...+|++|.|||.+|++.|+.++.+.+++.
T Consensus 262 ~g-Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L~~g-a~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 262 HG-ADPNAQDSNGNTVLHMLVIHFVTEMYDLALELG-ANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cC-CCCCccccCCChHHHHHHHHHHHHHHHHHHhcC-CCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 76 999999999999999999999999999999998 66 888999999999999999999999998887
No 70
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.73 E-value=6.4e-17 Score=136.59 Aligned_cols=145 Identities=26% Similarity=0.272 Sum_probs=111.9
Q ss_pred HhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHH
Q 009344 25 ALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAA 104 (537)
Q Consensus 25 ~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~ 104 (537)
-+.+|+..|.+..|+.||+..++ .++.+|.+|.||||-|+++||.+||+.|+..+ ++.+.+...|+||||-||
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an-----~vNtrD~D~YTpLHRAaYn~h~div~~ll~~g--An~~a~T~~GWTPLhSAc 138 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKAN-----HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSG--ANKEAKTNEGWTPLHSAC 138 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccc-----cccccccccccHHHHHHhcCchHHHHHHHHcc--CCcccccccCccchhhhh
Confidence 56788888888888888887664 48888888888888888888888888888877 788888888888888888
Q ss_pred HcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCH-HHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcH
Q 009344 105 KEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHV-EVLNFLIEAESSLITISRSNGKTALHSAARNGRL 177 (537)
Q Consensus 105 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~-~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~ 177 (537)
.-++++++..|++++++++.. .....||||.|+...+. ..+.+|+......+...+..+.||+.+|-+.+-.
T Consensus 139 kWnN~~va~~LLqhgaDVnA~-t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s 211 (228)
T KOG0512|consen 139 KWNNFEVAGRLLQHGADVNAQ-TKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMS 211 (228)
T ss_pred cccchhHHHHHHhccCccccc-ccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhh
Confidence 888888888888888888766 34567888888876553 4555666554444555666777888877666543
No 71
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.63 E-value=7.7e-15 Score=124.52 Aligned_cols=122 Identities=34% Similarity=0.543 Sum_probs=72.3
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCCh
Q 009344 19 GKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFD 98 (537)
Q Consensus 19 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t 98 (537)
+.+|.||||.|++.|+.++++.|++.+.+ ....+..|.||||.|+..++.+++++|++.+ .+.+..+..|.|
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~------~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~ 75 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGAD------VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG--ADVNARDKDGNT 75 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCC------CCccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCccccCCCCCC
Confidence 45566666666666666666666665543 2455556666666666666666666666654 344445555666
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHH
Q 009344 99 AFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFL 149 (537)
Q Consensus 99 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~L 149 (537)
|+|.|+..++.+++++|++++.+.... +..+.||++.|...++.+++++|
T Consensus 76 ~l~~a~~~~~~~~~~~L~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 76 PLHLAARNGNLDVVKLLLKHGADVNAR-DKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCccc-CCCCCCHHHHHHhcCCHHHHHHh
Confidence 666666666666666666655443332 45555666666666665555554
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.62 E-value=3.2e-15 Score=119.29 Aligned_cols=89 Identities=44% Similarity=0.652 Sum_probs=50.7
Q ss_pred HHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHH
Q 009344 168 LHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQI 247 (537)
Q Consensus 168 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~i 247 (537)
||+|++.|+.++++.|++.+.+... |+||||+|+.+|+.+++++|++.+ .+++.+|.+|+||||+|+..++.++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL-----GNTALHYAAENGNLEIVKLLLENG-ADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTT-TCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhc-ccccccCCCCCCHHHHHHHcCCHHH
Confidence 4556666666666666665443321 555666666666666666666655 5566666666666666666666666
Q ss_pred HHHHHhcCCCCcccCC
Q 009344 248 VRLLLANSETNLNGVN 263 (537)
Q Consensus 248 v~~Ll~~~~~~~~~~d 263 (537)
+++|+++| ++++.+|
T Consensus 75 ~~~Ll~~g-~~~~~~n 89 (89)
T PF12796_consen 75 VKLLLEHG-ADVNIRN 89 (89)
T ss_dssp HHHHHHTT-T-TTSS-
T ss_pred HHHHHHcC-CCCCCcC
Confidence 66666654 5555443
No 73
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.62 E-value=5e-16 Score=141.43 Aligned_cols=137 Identities=27% Similarity=0.340 Sum_probs=117.1
Q ss_pred HHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHH
Q 009344 172 ARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLL 251 (537)
Q Consensus 172 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~L 251 (537)
|+.|+.--|+..++......+.-|..|.+|||+|++.|+..+++.|+..+ +.+|..+....||||+|+.+|+.++|+.|
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rg-arvn~tnmgddtplhlaaahghrdivqkl 86 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRG-ARVNSTNMGDDTPLHLAAAHGHRDIVQKL 86 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcc-cccccccCCCCcchhhhhhcccHHHHHHH
Confidence 34444434444444444445556899999999999999999999999988 99999999999999999999999999999
Q ss_pred HhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhhhhhcCCCCCchHHHHHHH
Q 009344 252 LANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVESAKNMKPQNNPARELKQTV 310 (537)
Q Consensus 252 l~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 310 (537)
++.. +|+|+.|..|+||||+|+-.|...+.+-|+..|+....-++.+.+|.+..+...
T Consensus 87 l~~k-advnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l 144 (448)
T KOG0195|consen 87 LSRK-ADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPML 144 (448)
T ss_pred HHHh-cccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHH
Confidence 9988 999999999999999999999999999999999999998888888876655433
No 74
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.61 E-value=1.4e-14 Score=123.02 Aligned_cols=122 Identities=41% Similarity=0.677 Sum_probs=73.8
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHH
Q 009344 161 RSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIAT 240 (537)
Q Consensus 161 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~ 240 (537)
+.+|.||||+|+..|+.++++.|++.+.... ..+..|.+|+|.|+..++.+++++|++.+ ..++..+..|.||+|+|+
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~-~~~~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~~l~~a~ 81 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVN-AKDNDGRTPLHLAAKNGHLEIVKLLLEKG-ADVNARDKDGNTPLHLAA 81 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHH
Confidence 3455666666666666666666666555442 23556666666666666666666666655 455555666666666666
Q ss_pred HhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHH
Q 009344 241 RKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALL 285 (537)
Q Consensus 241 ~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L 285 (537)
..++.+++++|++.+ .+.+..|..|.||++.|...++.+++++|
T Consensus 82 ~~~~~~~~~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 82 RNGNLDVVKLLLKHG-ADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred HcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 666666666666655 55566666666666666666666665554
No 75
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.58 E-value=1.4e-14 Score=115.52 Aligned_cols=87 Identities=37% Similarity=0.648 Sum_probs=79.5
Q ss_pred HHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHH
Q 009344 202 LHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNL 281 (537)
Q Consensus 202 Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i 281 (537)
||+|++.|+.+++++|++.+ .+++. |+||||+|+..|+.+++++|++++ .+++..|..|.||||+|+..++.++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~-~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKG-ADINL----GNTALHYAAENGNLEIVKLLLENG-ADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTT-STTTS----SSBHHHHHHHTTTHHHHHHHHHTT-TCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCc-CCCCC----CCCHHHHHHHcCCHHHHHHHHHhc-ccccccCCCCCCHHHHHHHcCCHHH
Confidence 79999999999999999976 66665 899999999999999999999998 8999999999999999999999999
Q ss_pred HHHHHHcChhhhh
Q 009344 282 AALLREHGVESAK 294 (537)
Q Consensus 282 ~~~L~~~g~~~~~ 294 (537)
+++|+++|++...
T Consensus 75 ~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 75 VKLLLEHGADVNI 87 (89)
T ss_dssp HHHHHHTTT-TTS
T ss_pred HHHHHHcCCCCCC
Confidence 9999999988754
No 76
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.48 E-value=1.9e-12 Score=122.08 Aligned_cols=124 Identities=41% Similarity=0.576 Sum_probs=65.6
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCC-----HHHHHHHHHhCC--CCccccCCCCChHH
Q 009344 164 GKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQN-----IEVVQELIKAEP--ASVNMVDTKGNSPL 236 (537)
Q Consensus 164 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-----~~~v~~Ll~~~~--~~i~~~d~~G~t~L 236 (537)
+.+++|.++..+..++++.++..+.+. ...+..|.||||+|+..++ .++++.|++.+. ...+.+|.+|+|||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl 151 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPL 151 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchh
Confidence 444444444444444444444444444 2334444444444444444 555555555553 24444555666666
Q ss_pred HHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 009344 237 HIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHG 289 (537)
Q Consensus 237 h~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g 289 (537)
|+|+..|+.+++++|++.+ .+++..|..|.|+++.|...++.+++..+.+.+
T Consensus 152 ~~A~~~~~~~~~~~ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 152 HWAALNGDADIVELLLEAG-ADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHHHcCchHHHHHHHhcC-CCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 6666666666666665555 555555666666666666666666666655544
No 77
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.48 E-value=1.7e-12 Score=122.47 Aligned_cols=136 Identities=31% Similarity=0.464 Sum_probs=123.8
Q ss_pred cCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCc-----HHHHHHHHhcCC--cc
Q 009344 118 VYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGR-----LEVLKTLLAADS--VI 190 (537)
Q Consensus 118 ~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~-----~~~v~~Ll~~~~--~~ 190 (537)
.........+..+.++++.++..+..+++.+++..+.+. +..+.+|.||||+|+..++ .++++.|++.+. +.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~ 139 (235)
T COG0666 61 IVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV 139 (235)
T ss_pred ccccccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC
Confidence 333334444667899999999999999999999999996 9999999999999999999 999999999999 67
Q ss_pred ccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcC
Q 009344 191 AIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANS 255 (537)
Q Consensus 191 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~ 255 (537)
....|..|.||||+|+..|+.++++.|++.+ .+++..+..|.|+++.|+..++.++++.++..+
T Consensus 140 ~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 140 NNLRDEDGNTPLHWAALNGDADIVELLLEAG-ADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred ccccCCCCCchhHHHHHcCchHHHHHHHhcC-CCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 7777999999999999999999999999987 889999999999999999999999999999765
No 78
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.41 E-value=9.5e-13 Score=99.57 Aligned_cols=103 Identities=22% Similarity=0.318 Sum_probs=81.3
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHH
Q 009344 167 ALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQ 246 (537)
Q Consensus 167 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~ 246 (537)
-+.|++++|..+-|+..+..+-+++.. ..|++|||+|+..|+.+++++|+..+ ++++.+|+.|-|||.-|+..|+.+
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~--~ggR~plhyAAD~GQl~ilefli~iG-A~i~~kDKygITPLLsAvwEGH~~ 81 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEI--YGGRTPLHYAADYGQLSILEFLISIG-ANIQDKDKYGITPLLSAVWEGHRD 81 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHH--hCCcccchHhhhcchHHHHHHHHHhc-cccCCccccCCcHHHHHHHHhhHH
Confidence 466788888888888888777555433 47888888888888888888888877 888888888888888888888888
Q ss_pred HHHHHHhcCCCCcccCCCCCCCHHHHH
Q 009344 247 IVRLLLANSETNLNGVNRTGETALDTA 273 (537)
Q Consensus 247 iv~~Ll~~~~~~~~~~d~~g~T~L~~A 273 (537)
+|++|+++| ++-...-.+|.+.+..+
T Consensus 82 cVklLL~~G-Adrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 82 CVKLLLQNG-ADRTIHAPDGTALIEAT 107 (117)
T ss_pred HHHHHHHcC-cccceeCCCchhHHhhc
Confidence 888888887 77777777777666544
No 79
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.34 E-value=4.4e-12 Score=96.01 Aligned_cols=97 Identities=25% Similarity=0.381 Sum_probs=87.0
Q ss_pred hHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcH
Q 009344 200 TALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHS 279 (537)
Q Consensus 200 t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~ 279 (537)
.-+.+++++|..+-|+..+..+ .++|..- .|++|||+|+..|+.+++++|+..| ++++.+|+.|.|||--|+..|+.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g-~nVn~~~-ggR~plhyAAD~GQl~ilefli~iG-A~i~~kDKygITPLLsAvwEGH~ 80 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEG-LNVNEIY-GGRTPLHYAADYGQLSILEFLISIG-ANIQDKDKYGITPLLSAVWEGHR 80 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHcc-ccHHHHh-CCcccchHhhhcchHHHHHHHHHhc-cccCCccccCCcHHHHHHHHhhH
Confidence 3467889999999999998877 7777554 8999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHHcChhhhhhcCCC
Q 009344 280 NLAALLREHGVESAKNMKPQ 299 (537)
Q Consensus 280 ~i~~~L~~~g~~~~~~~~~~ 299 (537)
+++++|++.|++.......+
T Consensus 81 ~cVklLL~~GAdrt~~~PdG 100 (117)
T KOG4214|consen 81 DCVKLLLQNGADRTIHAPDG 100 (117)
T ss_pred HHHHHHHHcCcccceeCCCc
Confidence 99999999999987665444
No 80
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.34 E-value=1.3e-12 Score=93.66 Aligned_cols=56 Identities=45% Similarity=0.704 Sum_probs=31.1
Q ss_pred HHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHH
Q 009344 217 LIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTA 273 (537)
Q Consensus 217 Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A 273 (537)
||+.++.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g-~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNG-ADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT---TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc-CCCCCCcCCCCCHHHhC
Confidence 456667888999999999999999999999999999665 89999999999999986
No 81
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=4.9e-12 Score=124.38 Aligned_cols=118 Identities=25% Similarity=0.269 Sum_probs=67.8
Q ss_pred hHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHH
Q 009344 26 LHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAK 105 (537)
Q Consensus 26 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~ 105 (537)
|..|+..|.+++|+.++..-.+ ....|..|-|+||-|+..||.+||++|++.+ .++|..|.+|+||||+|+.
T Consensus 554 LLDaaLeGEldlVq~~i~ev~D------pSqpNdEGITaLHNAiCaghyeIVkFLi~~g--anVNa~DSdGWTPLHCAAS 625 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTD------PSQPNDEGITALHNAICAGHYEIVKFLIEFG--ANVNAADSDGWTPLHCAAS 625 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcC------CCCCCccchhHHhhhhhcchhHHHHHHHhcC--CcccCccCCCCchhhhhhh
Confidence 4455566666666666554433 4455666666666666666666666666655 5566666666666666666
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCChHHHHHH--HcCCHHHHHHHHH
Q 009344 106 EGHLEVLKVLLAVYPELAMTVDLTNTTALHTAA--MQGHVEVLNFLIE 151 (537)
Q Consensus 106 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~--~~g~~~iv~~Ll~ 151 (537)
.++..+++.|++.|+.+....=.++.|+..-+- ..|+.++.++|..
T Consensus 626 CNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 626 CNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred cCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 666666666666665555444445555544432 2355555555543
No 82
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.30 E-value=6.3e-12 Score=89.59 Aligned_cols=54 Identities=39% Similarity=0.560 Sum_probs=42.6
Q ss_pred CCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHH
Q 009344 22 DDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMI 81 (537)
Q Consensus 22 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll 81 (537)
|.||||+|++.|+.+++++|++.+.+ ++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~d------in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGAD------INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSG------TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 67999999999999999999988766 7777899999999999999999999886
No 83
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.27 E-value=1.1e-11 Score=88.36 Aligned_cols=54 Identities=41% Similarity=0.716 Sum_probs=31.1
Q ss_pred CchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHH
Q 009344 198 GQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLL 252 (537)
Q Consensus 198 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll 252 (537)
|+||||.|+..|+.+++++|++.+ .++|.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~-~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG-ADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT-SGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 456666666666666666666664 666666666666666666666666666654
No 84
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.22 E-value=7.6e-11 Score=107.94 Aligned_cols=122 Identities=21% Similarity=0.283 Sum_probs=99.2
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcC
Q 009344 62 ETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQG 141 (537)
Q Consensus 62 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g 141 (537)
..||..++..|..+-...|++.. ...+.+|..|.++|..|+..|+.++++.|++.+++++...+..+.||||.|+.+|
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~v--r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTV--RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHh--hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 56788888888888888888753 5677888888888888888888888888888888888877788888888888888
Q ss_pred CHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhc
Q 009344 142 HVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAA 186 (537)
Q Consensus 142 ~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 186 (537)
+.++.+.|++.|.. ....+.-|+|+-..|+.-|+-++|..+=++
T Consensus 91 n~dvcrllldaGa~-~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 91 NQDVCRLLLDAGAR-MYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred CchHHHHHHhccCc-cccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 88888888888887 466777888888888888888888766543
No 85
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21 E-value=4.8e-11 Score=117.51 Aligned_cols=116 Identities=27% Similarity=0.313 Sum_probs=78.6
Q ss_pred HHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHH
Q 009344 102 IAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLK 181 (537)
Q Consensus 102 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~ 181 (537)
-|+..|.+|+|+.++..-.+.... |..|.|+||-|+..||.+||++|++.|.+ .+..|.+||||||+|+..+++.+++
T Consensus 556 DaaLeGEldlVq~~i~ev~DpSqp-NdEGITaLHNAiCaghyeIVkFLi~~gan-VNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 556 DAALEGELDLVQRIIYEVTDPSQP-NDEGITALHNAICAGHYEIVKFLIEFGAN-VNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred hhhhcchHHHHHHHHHhhcCCCCC-CccchhHHhhhhhcchhHHHHHHHhcCCc-ccCccCCCCchhhhhhhcCchHHHH
Confidence 466667777777777665554433 56677777777777777777777777776 5666777777777777777777777
Q ss_pred HHHhcCCccccccCCCCchHHHHHH--hCCCHHHHHHHHH
Q 009344 182 TLLAADSVIAIRTDKKGQTALHMAV--KGQNIEVVQELIK 219 (537)
Q Consensus 182 ~Ll~~~~~~~~~~d~~g~t~Lh~A~--~~g~~~~v~~Ll~ 219 (537)
.|++.|+.+...+-.++.|+..-+- +.|..++.++|..
T Consensus 634 qLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 634 QLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 7777777666665666667665543 3566677777654
No 86
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.20 E-value=1.2e-10 Score=106.71 Aligned_cols=121 Identities=21% Similarity=0.259 Sum_probs=100.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCC
Q 009344 130 NTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQ 209 (537)
Q Consensus 130 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 209 (537)
-..||.-++..|+.+-+..||..-.. .+..|.+|.++|..|+.+|+.++++.|++.+++++..++..++||||.|+.+|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~-vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQ-VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhh-hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 35778888888888888888876333 67788888888888888888888888888888888888888889999999889
Q ss_pred CHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHH
Q 009344 210 NIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLL 252 (537)
Q Consensus 210 ~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll 252 (537)
+.++.+.|++.| +.....+.-|+|+-..|+.-|+.++|..+=
T Consensus 91 n~dvcrllldaG-a~~~~vNsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 91 NQDVCRLLLDAG-ARMYLVNSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred CchHHHHHHhcc-CccccccchhhhHHHHHHHhcchHHHHHHh
Confidence 988888888887 777778888889988888888888887664
No 87
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.20 E-value=6.8e-11 Score=128.53 Aligned_cols=106 Identities=26% Similarity=0.302 Sum_probs=72.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCH
Q 009344 132 TALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNI 211 (537)
Q Consensus 132 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 211 (537)
..|+.|+..|+.+.++.|++.+.+ .+..|.+|.||||+|+..|+.+++++|++.+++.... |..|.||||+|+..|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~-d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGAD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLL-DKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCcH
Confidence 456677777777777777777766 4566677777777777777777777777777665543 67777777777777777
Q ss_pred HHHHHHHHh------CCCCccccCCCCChHHHHH
Q 009344 212 EVVQELIKA------EPASVNMVDTKGNSPLHIA 239 (537)
Q Consensus 212 ~~v~~Ll~~------~~~~i~~~d~~G~t~Lh~A 239 (537)
+++++|+++ ..++.+..+..|.+|+..+
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~ 195 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED 195 (664)
T ss_pred HHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence 777777766 1255555566666665544
No 88
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.18 E-value=1.9e-11 Score=87.63 Aligned_cols=56 Identities=38% Similarity=0.462 Sum_probs=28.8
Q ss_pred HHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHH
Q 009344 183 LLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIA 239 (537)
Q Consensus 183 Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A 239 (537)
|+++++......|..|+||||+|+.+|+.+++++|++.+ .+++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g-~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNG-ADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT---TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc-CCCCCCcCCCCCHHHhC
Confidence 455664445556888888888888888888888888554 88888888889988887
No 89
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.16 E-value=1.6e-10 Score=125.65 Aligned_cols=107 Identities=26% Similarity=0.362 Sum_probs=94.3
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCH
Q 009344 166 TALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGRE 245 (537)
Q Consensus 166 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~ 245 (537)
..|+.|+..|+.+.++.|++.+++.+.. |..|.||||+|+.+|+.+++++|++.+ ++++.+|.+|+||||+|+..++.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~-d~~G~TpLh~Aa~~g~~eiv~~LL~~G-advn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCR-DYDGRTPLHIACANGHVQVVRVLLEFG-ADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcH
Confidence 4688999999999999999999887654 889999999999999999999999987 89999999999999999999999
Q ss_pred HHHHHHHhc------CCCCcccCCCCCCCHHHHHH
Q 009344 246 QIVRLLLAN------SETNLNGVNRTGETALDTAE 274 (537)
Q Consensus 246 ~iv~~Ll~~------~~~~~~~~d~~g~T~L~~A~ 274 (537)
+++++|+++ .+++.+..+..|.+|+..+.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 999999988 22677778888888876553
No 90
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.72 E-value=1.3e-08 Score=99.55 Aligned_cols=95 Identities=21% Similarity=0.358 Sum_probs=87.4
Q ss_pred CCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHH
Q 009344 195 DKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAE 274 (537)
Q Consensus 195 d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~ 274 (537)
+.++..++.+|++.|+...++.+.-.+ .+++..|.+.+|+||+|+..|+.+++++|++..+.+++.+|+.|+|||+-|.
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g-~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQG-MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhc-ccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 345667899999999999999888777 9999999999999999999999999999999998999999999999999999
Q ss_pred HcCcHHHHHHHHHcCh
Q 009344 275 KTGHSNLAALLREHGV 290 (537)
Q Consensus 275 ~~~~~~i~~~L~~~g~ 290 (537)
..++.+++++|.+...
T Consensus 582 ~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEAQY 597 (622)
T ss_pred hcCcHHHHHHHHHHhc
Confidence 9999999999987543
No 91
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.70 E-value=5e-08 Score=97.20 Aligned_cols=120 Identities=19% Similarity=0.173 Sum_probs=85.1
Q ss_pred hHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHH
Q 009344 26 LHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAK 105 (537)
Q Consensus 26 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~ 105 (537)
+..|+..+++-.++..-..|.+ +-.++....|.||+|+..|+-++|+|++++++.+.++..+..|.|+||.|+.
T Consensus 870 il~av~~~D~~klqE~h~~gg~------ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~ 943 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGS------LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAAC 943 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCc------eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH
Confidence 4556666665555444444443 5556677777888888888888888888887777777777777788887777
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHc
Q 009344 106 EGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEA 152 (537)
Q Consensus 106 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ 152 (537)
.++-.+.++|++.++.+-.. |..|.||-.-|-..|+.++..+|-.+
T Consensus 944 ~~~r~vc~~lvdagasl~kt-d~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 944 QRNRAVCQLLVDAGASLRKT-DSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred hcchHHHHHHHhcchhheec-ccCCCChHHHHHhcCCchHHHHHhhh
Confidence 77777777777777776544 77777777777777777777776543
No 92
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.63 E-value=2.5e-08 Score=103.62 Aligned_cols=99 Identities=28% Similarity=0.367 Sum_probs=81.5
Q ss_pred HHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCC
Q 009344 145 VLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPAS 224 (537)
Q Consensus 145 iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 224 (537)
+--++-+.+.+.+++.|..|+|+||+++..+...++++|+++|.++...-...|+||||-|+..|+.+++..||+++ ..
T Consensus 33 lk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g-~S 111 (1267)
T KOG0783|consen 33 LKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG-RS 111 (1267)
T ss_pred HHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcC-Cc
Confidence 44555566677788888889999999999999999999999988887775567899999999999999999888887 88
Q ss_pred ccccCCCCChHHHHHHHhCC
Q 009344 225 VNMVDTKGNSPLHIATRKGR 244 (537)
Q Consensus 225 i~~~d~~G~t~Lh~A~~~~~ 244 (537)
+..+|++|.+||..-++...
T Consensus 112 L~i~Dkeglsplq~~~r~~~ 131 (1267)
T KOG0783|consen 112 LRIKDKEGLSPLQFLSRVLS 131 (1267)
T ss_pred eEEecccCCCHHHHHhhccc
Confidence 88889999999888776433
No 93
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.60 E-value=1.7e-07 Score=92.30 Aligned_cols=86 Identities=33% Similarity=0.485 Sum_probs=63.5
Q ss_pred HHHHHHhCCCHHHHHHHHHhCCCCccccC-CCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcH
Q 009344 201 ALHMAVKGQNIEVVQELIKAEPASVNMVD-TKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHS 279 (537)
Q Consensus 201 ~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d-~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~ 279 (537)
-||.++..|+.+..-.||..| ++.|..+ ..|+||||+|++.|+..-+++|+-+| +|++..|.+|.||+++|...|+.
T Consensus 136 QLhasvRt~nlet~LRll~lG-A~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYG-AD~~a~d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLG-AQANFFHPEKGNTPLHVAAKAGQILQAELLAVYG-ADPGAQDSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcc-cccCCCCcccCCchhHHHHhccchhhhhHHhhcc-CCCCCCCCCCCcHHHHHHhcCch
Confidence 377777777777777777666 7777666 45778888888888777777777776 77888888888888888777777
Q ss_pred HHHHHHHHc
Q 009344 280 NLAALLREH 288 (537)
Q Consensus 280 ~i~~~L~~~ 288 (537)
++.+-|.+.
T Consensus 214 ~laeRl~e~ 222 (669)
T KOG0818|consen 214 ELAERLVEI 222 (669)
T ss_pred HHHHHHHHH
Confidence 766666553
No 94
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.60 E-value=1.8e-07 Score=93.35 Aligned_cols=117 Identities=25% Similarity=0.371 Sum_probs=98.0
Q ss_pred HHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCC-CccccCCCCChHHHHHHHhCCHHH
Q 009344 169 HSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPA-SVNMVDTKGNSPLHIATRKGREQI 247 (537)
Q Consensus 169 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~-~i~~~d~~G~t~Lh~A~~~~~~~i 247 (537)
..|+..+++--++..-..+.+...+ +.+..+.||+|++.|+-++|+|+|+++|. .+++.|+.|.|+||-|+..++..+
T Consensus 871 l~av~~~D~~klqE~h~~gg~ll~~-~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 871 LRAVLSSDLMKLQETHLNGGSLLIQ-GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHhccHHHHHHHHhcCCceEee-CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 4455555555555555556665554 77888999999999999999999999864 468889999999999999999999
Q ss_pred HHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 009344 248 VRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLRE 287 (537)
Q Consensus 248 v~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~ 287 (537)
..+|++.| +.+...|.+|.||-.-|.+.+++++..+|..
T Consensus 950 c~~lvdag-asl~ktd~kg~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 950 CQLLVDAG-ASLRKTDSKGKTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred HHHHHhcc-hhheecccCCCChHHHHHhcCCchHHHHHhh
Confidence 99999988 8899999999999999999999999988754
No 95
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.46 E-value=1.4e-07 Score=98.30 Aligned_cols=96 Identities=25% Similarity=0.332 Sum_probs=71.9
Q ss_pred HHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCcc
Q 009344 111 VLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVI 190 (537)
Q Consensus 111 iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~ 190 (537)
+.-++-+.+.+.....|..|+|+||+|+..+..+++++|+++|.+..-.....|+||||-|+..|+.+++-.||.+|...
T Consensus 33 lk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL 112 (1267)
T KOG0783|consen 33 LKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL 112 (1267)
T ss_pred HHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce
Confidence 34444455666666678888888888888888888888888887754444456888888888888888888888888665
Q ss_pred ccccCCCCchHHHHHHh
Q 009344 191 AIRTDKKGQTALHMAVK 207 (537)
Q Consensus 191 ~~~~d~~g~t~Lh~A~~ 207 (537)
... |++|..||..-++
T Consensus 113 ~i~-Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 113 RIK-DKEGLSPLQFLSR 128 (1267)
T ss_pred EEe-cccCCCHHHHHhh
Confidence 544 8888888876655
No 96
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.43 E-value=2.4e-07 Score=90.85 Aligned_cols=94 Identities=27% Similarity=0.349 Sum_probs=85.4
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHH
Q 009344 161 RSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIAT 240 (537)
Q Consensus 161 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~ 240 (537)
+.++..++.+|++.|++..++.+.-.+.+.... |.+.+|+||+|+..|+.+++++|++....+++.+|..|+|||.-|.
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~-DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETK-DYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhccccccc-ccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 345667899999999999999998888877654 9999999999999999999999999998999999999999999999
Q ss_pred HhCCHHHHHHHHhcC
Q 009344 241 RKGREQIVRLLLANS 255 (537)
Q Consensus 241 ~~~~~~iv~~Ll~~~ 255 (537)
..++.+++++|-+.-
T Consensus 582 ~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEAQ 596 (622)
T ss_pred hcCcHHHHHHHHHHh
Confidence 999999999997653
No 97
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.43 E-value=0.00039 Score=74.07 Aligned_cols=127 Identities=18% Similarity=0.224 Sum_probs=100.4
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChH
Q 009344 20 KRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDA 99 (537)
Q Consensus 20 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~ 99 (537)
..+.--...|+..|+.-.|+..++..... +-.++-.|.-|.++|++|+.+.|.+++++|++... .. ..+
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~--~lninc~d~lGr~al~iai~nenle~~eLLl~~~~--~~-------gdA 91 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVS--KLNINCRDPLGRLALHIAIDNENLELQELLLDTSS--EE-------GDA 91 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhcccc--ccchhccChHhhhceecccccccHHHHHHHhcCcc--cc-------chH
Confidence 34455677899999999999999876542 23367788999999999999999999999999641 11 458
Q ss_pred HHHHHHcCCHHHHHHHHhcCCccc---------ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcc
Q 009344 100 FHIAAKEGHLEVLKVLLAVYPELA---------MTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLI 157 (537)
Q Consensus 100 Lh~A~~~g~~~iv~~Ll~~~~~~~---------~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~ 157 (537)
|.+|+..|..++|+.++.+...-. ...-..+.|||.+||..++.|+++.|+++|.+..
T Consensus 92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 999999999999999998643321 1112356799999999999999999999987753
No 98
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.42 E-value=4.5e-07 Score=90.56 Aligned_cols=91 Identities=23% Similarity=0.379 Sum_probs=79.5
Q ss_pred cHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHH
Q 009344 24 TALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIA 103 (537)
Q Consensus 24 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A 103 (537)
-|||+++...+.+.....+.... ...+...|..|+||||+|+..|+.+.++.|+..+ ++...+|+.|++|||.|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~----~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~--Adv~~kN~~gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKV----SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAG--ADVSIKNNEGWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhh----hceeccccCCCCccHHHHHHhcCHHHHHHHHhcC--CCccccccccccHHHHH
Confidence 46999999999987777654332 3458889999999999999999999999999987 88999999999999999
Q ss_pred HHcCCHHHHHHHHhcCC
Q 009344 104 AKEGHLEVLKVLLAVYP 120 (537)
Q Consensus 104 ~~~g~~~iv~~Ll~~~~ 120 (537)
+..|+.+++..++.+..
T Consensus 96 v~~g~~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRHLK 112 (560)
T ss_pred HHcCCHHHHHHHHHHhH
Confidence 99999999999988754
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=98.40 E-value=3.8e-07 Score=55.65 Aligned_cols=29 Identities=41% Similarity=0.812 Sum_probs=18.2
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCCcc
Q 009344 231 KGNSPLHIATRKGREQIVRLLLANSETNLN 260 (537)
Q Consensus 231 ~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~ 260 (537)
+|+||||+|+..|+.+++++|+++| +|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g-advn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHG-ADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC-CCCC
Confidence 3566666666666666666666665 5554
No 100
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.39 E-value=1.1e-06 Score=86.68 Aligned_cols=86 Identities=29% Similarity=0.393 Sum_probs=72.5
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHH
Q 009344 167 ALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQ 246 (537)
Q Consensus 167 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~ 246 (537)
-||..++.|+.+..-.|+..|++.+..-...|.||||+|++.|+..-+++|+-.| ++++..|.+|.||+.+|-..|+-+
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYG-AD~~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYG-ADPGAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhcc-CCCCCCCCCCCcHHHHHHhcCchH
Confidence 4788888888888888888888888776778889999999999888888888766 888999999999999998888887
Q ss_pred HHHHHHh
Q 009344 247 IVRLLLA 253 (537)
Q Consensus 247 iv~~Ll~ 253 (537)
+.+.|++
T Consensus 215 laeRl~e 221 (669)
T KOG0818|consen 215 LAERLVE 221 (669)
T ss_pred HHHHHHH
Confidence 7776665
No 101
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.38 E-value=4.5e-07 Score=56.95 Aligned_cols=32 Identities=41% Similarity=0.807 Sum_probs=20.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCCcccCC
Q 009344 231 KGNSPLHIATRKGREQIVRLLLANSETNLNGVN 263 (537)
Q Consensus 231 ~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d 263 (537)
+|+||||+|+..++.+++++|+++| ++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG-ADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT-SCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc-CCCCCCC
Confidence 3666666666666666666666655 6666655
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.30 E-value=1.7e-06 Score=87.00 Aligned_cols=90 Identities=23% Similarity=0.334 Sum_probs=76.5
Q ss_pred HHHHHhCCCHHHHHHHHHhCC---CCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCc
Q 009344 202 LHMAVKGQNIEVVQELIKAEP---ASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGH 278 (537)
Q Consensus 202 Lh~A~~~g~~~~v~~Ll~~~~---~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~ 278 (537)
|.-|+...++..+..||.++. .+-..-+.+|+|+||+|+..|+..+.++|+-++ +|+..+|.+|+|+|.+|.+.|.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg-~dv~~rda~g~t~l~yar~a~s 706 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYG-VDVMARDAHGRTALFYARQAGS 706 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhC-ccceecccCCchhhhhHhhccc
Confidence 556777778888888888762 122234577899999999999999999999777 9999999999999999999999
Q ss_pred HHHHHHHHHcChhh
Q 009344 279 SNLAALLREHGVES 292 (537)
Q Consensus 279 ~~i~~~L~~~g~~~ 292 (537)
.+++.+|+++|...
T Consensus 707 qec~d~llq~gcp~ 720 (749)
T KOG0705|consen 707 QECIDVLLQYGCPD 720 (749)
T ss_pred HHHHHHHHHcCCCc
Confidence 99999999999654
No 103
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.28 E-value=2.1e-06 Score=85.89 Aligned_cols=89 Identities=35% Similarity=0.449 Sum_probs=65.4
Q ss_pred cHHHHHHHcCcHHHHHHHHhc-CCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCC
Q 009344 166 TALHSAARNGRLEVLKTLLAA-DSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGR 244 (537)
Q Consensus 166 tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~ 244 (537)
.|+|+++.....+-....+.. -.......|..|+||||+|+.-|+.+.++.|+..+ +++..+|++|++|||-|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~-Adv~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAG-ADVSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcC-CCccccccccccHHHHHHHcCC
Confidence 358888877766655554332 23334455777888888888888888888888877 7888888888888888888888
Q ss_pred HHHHHHHHhcC
Q 009344 245 EQIVRLLLANS 255 (537)
Q Consensus 245 ~~iv~~Ll~~~ 255 (537)
.+++..++.+.
T Consensus 101 ~q~i~~vlr~~ 111 (560)
T KOG0522|consen 101 EQIITEVLRHL 111 (560)
T ss_pred HHHHHHHHHHh
Confidence 88877777654
No 104
>PF13606 Ank_3: Ankyrin repeat
Probab=98.26 E-value=1.3e-06 Score=53.35 Aligned_cols=24 Identities=29% Similarity=0.497 Sum_probs=14.7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Q 009344 61 GETALYVAAEYGHVDLVAEMIKCY 84 (537)
Q Consensus 61 g~TpLh~A~~~g~~~iv~~Ll~~~ 84 (537)
|+||||+||+.|+.++|++|++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~g 25 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHG 25 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC
Confidence 556666666666666666666654
No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.19 E-value=0.0005 Score=73.33 Aligned_cols=127 Identities=28% Similarity=0.302 Sum_probs=103.4
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCc--ccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHH
Q 009344 59 QSGETALYVAAEYGHVDLVAEMIKCYDL--ADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHT 136 (537)
Q Consensus 59 ~~g~TpLh~A~~~g~~~iv~~Ll~~~~~--~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~ 136 (537)
..++--...|++.|+.-.|+..++.... .+.+..|.-|.++|+.|+.+.|.|+.++|++...+. ..+|.+
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~ 94 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLL 94 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHH
Confidence 3445557789999999999999987654 567889999999999999999999999999875432 468999
Q ss_pred HHHcCCHHHHHHHHHcCCCccc---------ccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccc
Q 009344 137 AAMQGHVEVLNFLIEAESSLIT---------ISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIR 193 (537)
Q Consensus 137 A~~~g~~~iv~~Ll~~~~~~~~---------~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~ 193 (537)
|+..|.++.|+.++.+...... ..-..+.|||.+||..++.++++.|+.++..+...
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 9999999999999987443211 11234679999999999999999999998766543
No 106
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.17 E-value=3.1e-06 Score=53.12 Aligned_cols=32 Identities=34% Similarity=0.512 Sum_probs=20.3
Q ss_pred CCchHHHHHHhCCCHHHHHHHHHhCCCCccccC
Q 009344 197 KGQTALHMAVKGQNIEVVQELIKAEPASVNMVD 229 (537)
Q Consensus 197 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d 229 (537)
+|.||||+|+.+|+.+++++|++.+ ++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG-ADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT-SCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc-CCCCCCC
Confidence 3566666666666666666666655 6666554
No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.03 E-value=1.4e-05 Score=80.65 Aligned_cols=87 Identities=29% Similarity=0.333 Sum_probs=74.7
Q ss_pred HHHHHHcCcHHHHHHHHhcCCcc---ccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCC
Q 009344 168 LHSAARNGRLEVLKTLLAADSVI---AIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGR 244 (537)
Q Consensus 168 Lh~A~~~g~~~~v~~Ll~~~~~~---~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~ 244 (537)
|.-|+...++..+..||.++... ....+.+|.|+||+|+..|++.+.++|+-++ +++..+|.+|+|+|.||-..|.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg-~dv~~rda~g~t~l~yar~a~s 706 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYG-VDVMARDAHGRTALFYARQAGS 706 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhC-ccceecccCCchhhhhHhhccc
Confidence 44567777888888899877432 2234667899999999999999999999766 9999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 009344 245 EQIVRLLLANS 255 (537)
Q Consensus 245 ~~iv~~Ll~~~ 255 (537)
.+++..|+++|
T Consensus 707 qec~d~llq~g 717 (749)
T KOG0705|consen 707 QECIDVLLQYG 717 (749)
T ss_pred HHHHHHHHHcC
Confidence 99999999998
No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.01 E-value=8.5e-06 Score=78.05 Aligned_cols=76 Identities=22% Similarity=0.290 Sum_probs=58.6
Q ss_pred CcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHH
Q 009344 23 DTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHI 102 (537)
Q Consensus 23 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~ 102 (537)
.--|.+|++.|+++.|++|++.|.+ +|..|....+||++|+..||.++|+.|++.|. .-..-..+|.-+ |+
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn------VN~vD~fD~spL~lAsLcGHe~vvklLLenGA--iC~rdtf~G~RC-~Y 107 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN------VNAVDRFDSSPLYLASLCGHEDVVKLLLENGA--ICSRDTFDGDRC-HY 107 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC------cchhhcccccHHHHHHHcCcHHHHHHHHHcCC--cccccccCcchh-hh
Confidence 4468999999999999999998876 88899999999999999999999999999873 322223345444 44
Q ss_pred HHHcC
Q 009344 103 AAKEG 107 (537)
Q Consensus 103 A~~~g 107 (537)
++.+.
T Consensus 108 gaLnd 112 (516)
T KOG0511|consen 108 GALND 112 (516)
T ss_pred hhhhH
Confidence 44443
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.94 E-value=7.9e-06 Score=88.38 Aligned_cols=129 Identities=26% Similarity=0.297 Sum_probs=103.5
Q ss_pred ccCCCCCcHHHHHHHcCcHHHHHHHHhc-CCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHH
Q 009344 159 ISRSNGKTALHSAARNGRLEVLKTLLAA-DSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLH 237 (537)
Q Consensus 159 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh 237 (537)
.....|++.+|+++..++.-.++.+++. +.... ..|.+|...+|+ |..++.+...+++...+..++.+|..|+||||
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~-eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDL-ELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLH 646 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHhcccccCch-hhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccc
Confidence 3455689999999999999999999986 43333 348888889999 44556666666666666899999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCC-----CCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 009344 238 IATRKGREQIVRLLLANSE-----TNLNGVNRTGETALDTAEKTGHSNLAALLREHG 289 (537)
Q Consensus 238 ~A~~~~~~~iv~~Ll~~~~-----~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g 289 (537)
+|+.+|+..++..|++.+. .+++..+-.|.|+-++|...|+..+..+|.+.-
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~ 703 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKA 703 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhH
Confidence 9999999999999997763 235555667999999999999998888887763
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.82 E-value=5.9e-05 Score=65.81 Aligned_cols=70 Identities=24% Similarity=0.268 Sum_probs=57.5
Q ss_pred CCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHHcCcHHHHHHHHHcChhh
Q 009344 223 ASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEKTGHSNLAALLREHGVES 292 (537)
Q Consensus 223 ~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~ 292 (537)
.++|.+|..|+|||+.|+..|+.+.+.+|+++|.+.+...|..|.+++.+|.+.|..+++..|.+.--+.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 5678888888888888888888888888888887788888888888888888888888888887764433
No 111
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.80 E-value=2e-05 Score=85.82 Aligned_cols=91 Identities=34% Similarity=0.486 Sum_probs=82.1
Q ss_pred CCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHH
Q 009344 196 KKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEK 275 (537)
Q Consensus 196 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~ 275 (537)
..|.++||.|+..+...++++|++++ +++|..|..|+||||.+...|+...+..|++++ ++.++.|.+|.+|+++|..
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~g-a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~-a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNG-ADVNALDSKGRTPLHHATASGHTSIACLLLKRG-ADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcC-CcchhhhccCCCcchhhhhhcccchhhhhcccc-ccccccCccCcchhhHHhh
Confidence 35789999999999999999999998 889999999999999999999999999999977 9999999999999999988
Q ss_pred cCcHHHHHHHHHc
Q 009344 276 TGHSNLAALLREH 288 (537)
Q Consensus 276 ~~~~~i~~~L~~~ 288 (537)
..+.+++-++.-.
T Consensus 732 ~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 732 AANADIVLLLRLA 744 (785)
T ss_pred hccccHHHHHhhh
Confidence 7766766655443
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.64 E-value=7.4e-05 Score=81.12 Aligned_cols=125 Identities=22% Similarity=0.165 Sum_probs=59.9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHH
Q 009344 92 KARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSA 171 (537)
Q Consensus 92 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A 171 (537)
....|.+-+|+++..+...+++.+++.........|.+|.-.+|.++ .++.+.+-+++......++.+|..|+||||+|
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA 648 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTPLHWA 648 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcccchH
Confidence 34445556666666666555555555411112222444444555532 33334444444443333555566666666666
Q ss_pred HHcCcHHHHHHHHhcCCccccccC-----CCCchHHHHHHhCCCHHHHHHH
Q 009344 172 ARNGRLEVLKTLLAADSVIAIRTD-----KKGQTALHMAVKGQNIEVVQEL 217 (537)
Q Consensus 172 ~~~g~~~~v~~Ll~~~~~~~~~~d-----~~g~t~Lh~A~~~g~~~~v~~L 217 (537)
+..|+..++..|.+.+++.....| ..|.|+-..|..+|+..+.-+|
T Consensus 649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~l 699 (975)
T KOG0520|consen 649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYL 699 (975)
T ss_pred hhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHH
Confidence 666666666666554443332222 1244444444444444444443
No 113
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.51 E-value=0.00024 Score=62.08 Aligned_cols=67 Identities=25% Similarity=0.252 Sum_probs=37.6
Q ss_pred cccccCCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCc
Q 009344 54 LPKQNQSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPE 121 (537)
Q Consensus 54 l~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~ 121 (537)
++.+|..|+|||+.|+..|+.+.|.||+.++. +.+...|..|.+++.+|-+.|..+++..|-+...+
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~-a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGV-AFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCc-ccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 45555556666666666666666666655442 34555555555566666556665555555555433
No 114
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.45 E-value=0.00024 Score=68.42 Aligned_cols=73 Identities=22% Similarity=0.240 Sum_probs=58.6
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHc
Q 009344 64 ALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQ 140 (537)
Q Consensus 64 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~ 140 (537)
-|..||+.|+.+.|++|++.| .++|..|....+||.+|+..||.++++.|+++|+-.... ..+|.-. |+++.+
T Consensus 39 elceacR~GD~d~v~~LVetg--vnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rd-tf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETG--VNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRD-TFDGDRC-HYGALN 111 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhC--CCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccccc-ccCcchh-hhhhhh
Confidence 488999999999999999976 788889999999999999999999999999998765432 3455554 444443
No 115
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.40 E-value=0.00015 Score=79.26 Aligned_cols=90 Identities=21% Similarity=0.197 Sum_probs=74.9
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHH
Q 009344 59 QSGETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAA 138 (537)
Q Consensus 59 ~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~ 138 (537)
..|.|+||.|+..|..-+++.|++.+ ++++..|..|.+|||.+...|+...+..+++++++.... +..|.+||++|.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~g--a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~-~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNG--ADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAF-DPDGKLPLDIAM 730 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcC--CcchhhhccCCCcchhhhhhcccchhhhhcccccccccc-CccCcchhhHHh
Confidence 46789999999999999999999987 678889999999999999999999999999988876655 888999999997
Q ss_pred HcCCHHHHHHHHH
Q 009344 139 MQGHVEVLNFLIE 151 (537)
Q Consensus 139 ~~g~~~iv~~Ll~ 151 (537)
...+.+++-++.-
T Consensus 731 ~~~~~d~~~l~~l 743 (785)
T KOG0521|consen 731 EAANADIVLLLRL 743 (785)
T ss_pred hhccccHHHHHhh
Confidence 7766666555443
No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.47 E-value=0.016 Score=58.20 Aligned_cols=64 Identities=19% Similarity=0.232 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHhCCCCcc------ccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHH
Q 009344 209 QNIEVVQELIKAEPASVN------MVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAE 274 (537)
Q Consensus 209 g~~~~v~~Ll~~~~~~i~------~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~ 274 (537)
.....+++|.++. .+.| ..|..--|+||+|+..|..+++.++|+.+ +|+..+|..|.||.+++.
T Consensus 402 ~~p~~ie~lken~-lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 402 PEPDSIEALKENL-LSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG-CDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred CchhHHHHHHhcC-CcccccccccccccccchHHHHHHhcchHHHHHHHHHhc-CCchhcccCCCCcccccc
Confidence 3456677776654 3333 23444569999999999999999999999 999999999999999987
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.57 E-value=0.017 Score=33.63 Aligned_cols=25 Identities=44% Similarity=0.505 Sum_probs=16.5
Q ss_pred CCcHhHHHHHcCCHHHHHHHHccCc
Q 009344 22 DDTALHSAARAGNLDEVKDILTGTE 46 (537)
Q Consensus 22 g~t~Lh~Aa~~g~~~~v~~Ll~~~~ 46 (537)
|+||+|+|+..|+.++++.|++.+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5666777777677777776666543
No 118
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.46 E-value=0.025 Score=32.81 Aligned_cols=24 Identities=42% Similarity=0.846 Sum_probs=12.0
Q ss_pred CChHHHHHHHhCCHHHHHHHHhcC
Q 009344 232 GNSPLHIATRKGREQIVRLLLANS 255 (537)
Q Consensus 232 G~t~Lh~A~~~~~~~iv~~Ll~~~ 255 (537)
|.||+|+|+..++.++++.|++.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 445555555555555555555443
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.06 E-value=0.14 Score=46.56 Aligned_cols=116 Identities=19% Similarity=0.265 Sum_probs=82.0
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCccccC----CCCChHHHHHHH-
Q 009344 167 ALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMVD----TKGNSPLHIATR- 241 (537)
Q Consensus 167 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d----~~G~t~Lh~A~~- 241 (537)
.|.-|+...+++-+..++... +.-.+++.+|..++..+++-+|+... .....| ..+---+.++..
T Consensus 156 sledAV~AsN~~~i~~~VtdK--------kdA~~Am~~si~~~K~dva~~lls~f--~ft~~dv~~~~~~~ydieY~LS~ 225 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDK--------KDAHQAMWLSIGNAKEDVALYLLSKF--NFTKQDVASMEKELYDIEYLLSE 225 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcch--------HHHHHHHHHHhcccHHHHHHHHHhhc--ceecchhhhcCcchhhHHHHHhh
Confidence 456677777877777776532 22346888888888888988888753 111111 112222333332
Q ss_pred -hCCHHHHHHHHhcCCCCcccC---CCCCCCHHHHHHHcCcHHHHHHHHHcChhh
Q 009344 242 -KGREQIVRLLLANSETNLNGV---NRTGETALDTAEKTGHSNLAALLREHGVES 292 (537)
Q Consensus 242 -~~~~~iv~~Ll~~~~~~~~~~---d~~g~T~L~~A~~~~~~~i~~~L~~~g~~~ 292 (537)
..+..++++.+++|-+++|.. -+.|.|-|+-|.+.++.+++.+|+++|+-.
T Consensus 226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 346788999999998888764 467999999999999999999999999854
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.72 E-value=0.39 Score=42.46 Aligned_cols=136 Identities=16% Similarity=0.175 Sum_probs=66.1
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCH
Q 009344 64 ALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHV 143 (537)
Q Consensus 64 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~ 143 (537)
.|..|+.++-..++++.-+... ..-...++-+-.||+..+.|+++|+-+.-+- .+-.+.+..|....+.
T Consensus 49 Ll~HAVk~nmL~ILqkyke~L~-----~~~~~~q~LFElAC~~qkydiV~WI~qnL~i------~~~~~iFdIA~~~kDl 117 (192)
T PF03158_consen 49 LLYHAVKYNMLSILQKYKEDLE-----NERYLNQELFELACEEQKYDIVKWIGQNLHI------YNPEDIFDIAFAKKDL 117 (192)
T ss_pred HHHHHHHcCcHHHHHHHHHHhh-----cchhHHHHHHHHHHHHccccHHHHHhhccCC------CCchhhhhhhhhccch
Confidence 3456777777777766655321 0012345566677777777777777443211 1223455666666665
Q ss_pred HHHH----HHHHcCCCcccccCCC--CCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHH
Q 009344 144 EVLN----FLIEAESSLITISRSN--GKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQEL 217 (537)
Q Consensus 144 ~iv~----~Ll~~~~~~~~~~~~~--g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 217 (537)
++.. .++++..+. ...|.. -..-|..|+..|-.+.+...++.|.+.. .++|..|++.++-.++.++
T Consensus 118 sLyslGY~l~~~~~~~~-~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~-------~~vls~Av~ynhRkIL~yf 189 (192)
T PF03158_consen 118 SLYSLGYKLLFNRMMSE-HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD-------IIVLSQAVKYNHRKILDYF 189 (192)
T ss_pred hHHHHHHHHHHhhcccc-cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc-------HHHHHHHHHhhHHHHHHHh
Confidence 5422 122221110 000000 0012445555565555555555554332 1455555555555555554
Q ss_pred H
Q 009344 218 I 218 (537)
Q Consensus 218 l 218 (537)
+
T Consensus 190 i 190 (192)
T PF03158_consen 190 I 190 (192)
T ss_pred h
Confidence 4
No 121
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.97 E-value=0.76 Score=40.67 Aligned_cols=136 Identities=15% Similarity=0.095 Sum_probs=78.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHH
Q 009344 100 FHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEV 179 (537)
Q Consensus 100 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~ 179 (537)
|..|+..+.+.+++..-+...+- -...++.+-.||+..+.|+|+|+-+.-.. .+-.+-+..|...++.+.
T Consensus 50 l~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~i------~~~~~iFdIA~~~kDlsL 119 (192)
T PF03158_consen 50 LYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLHI------YNPEDIFDIAFAKKDLSL 119 (192)
T ss_pred HHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccCC------CCchhhhhhhhhccchhH
Confidence 45677777777777666543211 12446777788888888888888443211 223456667777777665
Q ss_pred HH----HHHhcCCccccccCC--CCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHh
Q 009344 180 LK----TLLAADSVIAIRTDK--KGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLA 253 (537)
Q Consensus 180 v~----~Ll~~~~~~~~~~d~--~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~ 253 (537)
.. .++++.... ...|. --..-|..|+..|-...+...++.| .+++ +++|-.|+..++.+++.+++.
T Consensus 120 yslGY~l~~~~~~~~-~~~d~~~ll~~hl~~a~~kgll~F~letlkyg-g~~~------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 120 YSLGYKLLFNRMMSE-HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYG-GNVD------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHHhhcccc-cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcC-Cccc------HHHHHHHHHhhHHHHHHHhhc
Confidence 32 222221111 00000 0012356777888888877777776 3322 277888888888877777653
No 122
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.52 E-value=0.088 Score=53.17 Aligned_cols=41 Identities=24% Similarity=0.227 Sum_probs=21.3
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHH
Q 009344 62 ETALYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAA 104 (537)
Q Consensus 62 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~ 104 (537)
.|+||+|+..|..++|.+||+.+ .|+..+|..|.||..++.
T Consensus 431 sT~LH~aa~qg~~k~v~~~Leeg--~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 431 STFLHYAAAQGARKCVKYFLEEG--CDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred chHHHHHHhcchHHHHHHHHHhc--CCchhcccCCCCcccccc
Confidence 45555555555555555555544 455555555555554443
No 123
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=92.03 E-value=1.4 Score=40.20 Aligned_cols=120 Identities=18% Similarity=0.184 Sum_probs=75.9
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHH
Q 009344 99 AFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLE 178 (537)
Q Consensus 99 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~ 178 (537)
.|--|+...+.+-+..++... ..-.+++-+|+..+..+++.+|+.+-.- |.-..|-....+.
T Consensus 156 sledAV~AsN~~~i~~~VtdK--------kdA~~Am~~si~~~K~dva~~lls~f~f----------t~~dv~~~~~~~y 217 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDK--------KDAHQAMWLSIGNAKEDVALYLLSKFNF----------TKQDVASMEKELY 217 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcch--------HHHHHHHHHHhcccHHHHHHHHHhhcce----------ecchhhhcCcchh
Confidence 455666666666665555432 1235677777777777888888765321 1111222222333
Q ss_pred HHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCCCCcccc---CCCCChHHHHHHHhCCHHHHHHHHhcC
Q 009344 179 VLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEPASVNMV---DTKGNSPLHIATRKGREQIVRLLLANS 255 (537)
Q Consensus 179 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~---d~~G~t~Lh~A~~~~~~~iv~~Ll~~~ 255 (537)
-++++|+.. +-+..+++++++.|-+++|.. -+.|.|-|.-|++.++.+++..|+++|
T Consensus 218 dieY~LS~h--------------------~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~G 277 (284)
T PF06128_consen 218 DIEYLLSEH--------------------SASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYG 277 (284)
T ss_pred hHHHHHhhc--------------------CCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcC
Confidence 445555421 234577888888876776643 467899999999999999999999988
Q ss_pred C
Q 009344 256 E 256 (537)
Q Consensus 256 ~ 256 (537)
.
T Consensus 278 A 278 (284)
T PF06128_consen 278 A 278 (284)
T ss_pred c
Confidence 3
No 124
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=89.56 E-value=0.86 Score=34.51 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=26.2
Q ss_pred cHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHc
Q 009344 24 TALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKC 83 (537)
Q Consensus 24 t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~ 83 (537)
..+..|+..|+.|+++.+++.+.. ....+..|+...+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~~-------------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNKP-------------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhcc-------------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 445666666666666666543211 13346666666666666666664
No 125
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=89.47 E-value=9.6 Score=37.75 Aligned_cols=230 Identities=10% Similarity=0.061 Sum_probs=131.5
Q ss_pred cccccccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccc
Q 009344 11 KKMTKQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCYDL-ADA 89 (537)
Q Consensus 11 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~~~-~~~ 89 (537)
.++..-..|.+|.-.|..+...++.+....+++.-. +.... -..|..|.-.+......+..+-...+++...+ ...
T Consensus 10 ~~~~~l~~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~-~~~~~--l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~ 86 (322)
T cd07920 10 GHIVEFAKDQHGSRFLQQKLEEATPEEKELIFDEIL-PHVVE--LMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVR 86 (322)
T ss_pred cchhhccCCchhhHHHHHHhccCCHHHHHHHHHHHH-HhHHH--HhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 344455677888899999999999888888877522 22222 23566788888888888877766555553211 112
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHhcC-C-cccccCCCCCChHHHHHHHcCCHHHHHHHHHcCC--CcccccCCCCC
Q 009344 90 GIKARNGFDAFHIAAKEGHLEVLKVLLAVY-P-ELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAES--SLITISRSNGK 165 (537)
Q Consensus 90 ~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~-~-~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~--~~~~~~~~~g~ 165 (537)
-..+..|.-.+..+...+..+....+++.- + -.....|..|...+..+...+..+..+.+++.-. -..-..+..|.
T Consensus 87 l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~ 166 (322)
T cd07920 87 LSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGC 166 (322)
T ss_pred HcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 235667777777777776654444444321 1 1122346778888887777776665555554311 11112345666
Q ss_pred cHHHHHHHcCcHH----HHHHHHhcCCccccccCCCCchHHHHHHhCCCHHHHHHHHHhCC--CCccccCCCCChHHHHH
Q 009344 166 TALHSAARNGRLE----VLKTLLAADSVIAIRTDKKGQTALHMAVKGQNIEVVQELIKAEP--ASVNMVDTKGNSPLHIA 239 (537)
Q Consensus 166 tpLh~A~~~g~~~----~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~--~~i~~~d~~G~t~Lh~A 239 (537)
..+.........+ +++.+...-. ....|..|...+..+.+.+..+..+.+++.-. ..--..+..|...+..+
T Consensus 167 ~vvq~~l~~~~~~~~~~l~~~l~~~~~--~L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~ 244 (322)
T cd07920 167 RVIQRCLEHCSEEQREPLLEEILEHAL--ELVQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKC 244 (322)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH--HHhcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHH
Confidence 6666666554433 3333333211 22236778777887777776654444443211 11123567777777777
Q ss_pred HHhCCH
Q 009344 240 TRKGRE 245 (537)
Q Consensus 240 ~~~~~~ 245 (537)
...+..
T Consensus 245 l~~~~~ 250 (322)
T cd07920 245 LKHASK 250 (322)
T ss_pred HHHCCH
Confidence 776653
No 126
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=86.26 E-value=1.9 Score=32.59 Aligned_cols=48 Identities=25% Similarity=0.362 Sum_probs=29.3
Q ss_pred hHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcC
Q 009344 200 TALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANS 255 (537)
Q Consensus 200 t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~ 255 (537)
..+..|+.+|+.|+++.+++... + ....+..|+...+.+++++|++..
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~--~------~~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNK--P------DNDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhc--c------HHHHHHHHHHHhhHHHHHHHHHhc
Confidence 44566777777777776665431 0 134566777777777777776653
No 127
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.79 E-value=2.3 Score=32.02 Aligned_cols=47 Identities=13% Similarity=0.157 Sum_probs=33.3
Q ss_pred hHhhhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009344 401 IFFVFDSIALFISLAVVVVQTSVVVIESKAKRQLMAVINKLMWLACVLISVAYLAMSFIV 460 (537)
Q Consensus 401 ~f~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~af~~~~~~v 460 (537)
+++++|.+||.+|+..+.+-+..+|.+...+ ...+|.++|.+|+-+.
T Consensus 15 awi~f~waafg~s~~m~~~gi~~lPVD~w~K-------------Gy~~MG~lfltgSt~t 61 (95)
T COG4298 15 AWIMFNWAAFGASYFMLGLGIWLLPVDLWTK-------------GYWAMGILFLTGSTVT 61 (95)
T ss_pred hhHhHHHHHHHHHHHHHHHHhheechHHHHH-------------HHHHHHHHHHhcchhh
Confidence 5888999999999988888777777664433 3345666666665533
No 128
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=84.59 E-value=30 Score=34.19 Aligned_cols=193 Identities=9% Similarity=0.088 Sum_probs=110.1
Q ss_pred cccCCCCCCcHhHHHHHcCCHHHHHHHHccCchhhHhhhcccccCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccccccC
Q 009344 15 KQLTGKRDDTALHSAARAGNLDEVKDILTGTEEAKLKELLPKQNQSGETALYVAAEYGHVDLVAEMIKCY-DLADAGIKA 93 (537)
Q Consensus 15 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~ll~~~n~~g~TpLh~A~~~g~~~iv~~Ll~~~-~~~~~~~~~ 93 (537)
.-..|..|+-.+-.....+..+....+++.-. ..+.. -..+..|.-.+-.+...+..+....+++.- +....-..|
T Consensus 50 ~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~-~~~~~--l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d 126 (322)
T cd07920 50 ELMVDPFGNYVIQKLFEHGTEEQRLQLLEKIL-GHVVR--LSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKD 126 (322)
T ss_pred HHhcCccccHHHHHHHHhCCHHHHHHHHHHHH-HHHHH--HcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhc
Confidence 33466677777777777777665555554321 11111 135567777777777777655554444431 112233467
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCC--cccccCCCCCChHHHHHHHcCCHHHHH----HHHHcCCCcccccCCCCCcH
Q 009344 94 RNGFDAFHIAAKEGHLEVLKVLLAVYP--ELAMTVDLTNTTALHTAAMQGHVEVLN----FLIEAESSLITISRSNGKTA 167 (537)
Q Consensus 94 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~--~~~~~~d~~g~t~L~~A~~~g~~~iv~----~Ll~~~~~~~~~~~~~g~tp 167 (537)
..|...+..+...++.+..+.+++.-. -.....+..|...+.........+..+ .+...-. .-..|..|...
T Consensus 127 ~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~--~L~~d~~Gn~v 204 (322)
T cd07920 127 QNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRVIQRCLEHCSEEQREPLLEEILEHAL--ELVQDQFGNYV 204 (322)
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHH--HHhcCCchhhH
Confidence 788888887777776665555554211 111233567877777777766544333 3333221 22457788888
Q ss_pred HHHHHHcCcHHHHHHHHhcC--CccccccCCCCchHHHHHHhCCCHH
Q 009344 168 LHSAARNGRLEVLKTLLAAD--SVIAIRTDKKGQTALHMAVKGQNIE 212 (537)
Q Consensus 168 Lh~A~~~g~~~~v~~Ll~~~--~~~~~~~d~~g~t~Lh~A~~~g~~~ 212 (537)
+..+...+..+..+.+++.- .-.....++.|...+..+...+..+
T Consensus 205 vq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~~~~~~ 251 (322)
T cd07920 205 VQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLKHASKE 251 (322)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHCCHH
Confidence 88888888765444444321 1112234677777777777766543
No 129
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=73.72 E-value=61 Score=28.28 Aligned_cols=32 Identities=41% Similarity=0.494 Sum_probs=26.5
Q ss_pred cccccCCccchhHhhhhHHHHHHHHHHHHHHH
Q 009344 390 EAHVSQKPAFIIFFVFDSIALFISLAVVVVQT 421 (537)
Q Consensus 390 ~~~~~~~~~f~~f~~~~~~a~~~s~~~~~~~~ 421 (537)
++.+.+-++|+.|++.|.++..-|+..+...+
T Consensus 35 ~a~f~d~~af~y~v~anai~~~Ysll~l~~~~ 66 (154)
T TIGR01569 35 KAKFSDLPAFVYFVVANAIACGYSLLSLVVSI 66 (154)
T ss_pred eeeeeccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567788999999999999999998776554
No 130
>KOG4193 consensus G protein-coupled receptors [Signal transduction mechanisms]
Probab=64.62 E-value=58 Score=35.40 Aligned_cols=14 Identities=7% Similarity=0.093 Sum_probs=8.7
Q ss_pred HHHHHHHHhhhccC
Q 009344 450 SVAYLAMSFIVVGK 463 (537)
Q Consensus 450 ~~af~~~~~~v~~~ 463 (537)
.++-..|++.+++.
T Consensus 527 GlTW~fgi~s~~~~ 540 (610)
T KOG4193|consen 527 GLTWIFGIFSWLPG 540 (610)
T ss_pred HHHHHHHHHHHhcc
Confidence 34566677766664
No 131
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=60.56 E-value=9.6 Score=26.88 Aligned_cols=16 Identities=19% Similarity=0.654 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 009344 442 MWLACVLISVAYLAMS 457 (537)
Q Consensus 442 ~~~~~~~~~~af~~~~ 457 (537)
||+++.+|..=|.+..
T Consensus 2 MWiS~~~iglMfisv~ 17 (58)
T PF10966_consen 2 MWISFGAIGLMFISVI 17 (58)
T ss_pred cchHHHHHHHHHHHHH
Confidence 3444444444333333
No 132
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=59.48 E-value=1.2e+02 Score=30.85 Aligned_cols=20 Identities=25% Similarity=0.193 Sum_probs=11.7
Q ss_pred hhhHHHHHHHHHHHHhhcCC
Q 009344 353 TTVVAVLIATIAFAAIFQVP 372 (537)
Q Consensus 353 ~~~va~liatvtf~a~~~~P 372 (537)
+.++|++.+.++....-..|
T Consensus 12 ~~~~av~la~~~~~ld~~~~ 31 (371)
T PF10011_consen 12 YAVLAVVLAFLTPYLDRLLP 31 (371)
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 45566666666666655555
No 133
>PF07344 Amastin: Amastin surface glycoprotein; InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long).In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.
Probab=58.74 E-value=58 Score=28.41 Aligned_cols=57 Identities=12% Similarity=0.280 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc-CCcchhhhHHHHHHHHHHHHHHHHHHHHhh
Q 009344 436 AVINKLMWLACVLISVAYLAMSFIVVG-KREKWMAVAVTIVGAVIMAATLGTMIYWVI 492 (537)
Q Consensus 436 ~~~~~l~~~~~~~~~~af~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
.....+..++++...+||..|..+... ...+|...+..+++.+.....+..++....
T Consensus 63 ~aa~afaIisi~~~~~a~v~g~~~l~~~~~~r~v~l~L~~~~~~~~~v~wa~~v~~Y~ 120 (155)
T PF07344_consen 63 RAAQAFAIISIFVYGAAFVLGVLLLCCCSCLRWVCLVLNIVGIVTLLVVWALMVVVYY 120 (155)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344445556666666666666666665 556676666666666666666665555443
No 134
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=55.35 E-value=1.4e+02 Score=32.18 Aligned_cols=15 Identities=13% Similarity=0.215 Sum_probs=5.8
Q ss_pred HHHHHHHHHHhhhhc
Q 009344 481 AATLGTMIYWVIRHR 495 (537)
Q Consensus 481 ~~~~~~~~~~~~~~~ 495 (537)
..+++.++.+.++.|
T Consensus 126 ~g~l~~ll~~~~~~r 140 (555)
T COG2194 126 VGLLPALLIVLVIIR 140 (555)
T ss_pred HHHHHHHHHHHHHHh
Confidence 333333444443333
No 135
>PF14126 DUF4293: Domain of unknown function (DUF4293)
Probab=54.56 E-value=1.4e+02 Score=25.80 Aligned_cols=14 Identities=7% Similarity=0.204 Sum_probs=8.0
Q ss_pred hhhhHHHHHHHHHH
Q 009344 352 STTVVAVLIATIAF 365 (537)
Q Consensus 352 ~~~~va~liatvtf 365 (537)
-++++|++++.+++
T Consensus 7 lyLlla~i~~~~~l 20 (149)
T PF14126_consen 7 LYLLLAAILMGVLL 20 (149)
T ss_pred HHHHHHHHHHHHHH
Confidence 34566666655555
No 136
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=52.04 E-value=2.2e+02 Score=27.62 Aligned_cols=32 Identities=9% Similarity=-0.012 Sum_probs=18.2
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 009344 466 KWMAVAVTIVGAVIMAATLGTMIYWVIRHRIE 497 (537)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (537)
.|..-+.+++.+.+...++..+.+.+.+++..
T Consensus 70 ~~~~~~~l~~~Gglwy~~lsl~~~~l~p~r~~ 101 (284)
T PF12805_consen 70 EALEHALLFLAGGLWYLLLSLLWWPLRPYRPV 101 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 35555555555555666666666666665544
No 137
>PRK04125 murein hydrolase regulator LrgA; Provisional
Probab=51.04 E-value=1.2e+02 Score=26.04 Aligned_cols=7 Identities=14% Similarity=0.321 Sum_probs=3.5
Q ss_pred HhhcCCC
Q 009344 367 AIFQVPG 373 (537)
Q Consensus 367 a~~~~Pg 373 (537)
..+.+||
T Consensus 30 l~lPiPG 36 (141)
T PRK04125 30 LPIPMPA 36 (141)
T ss_pred cCCCCcH
Confidence 3445555
No 138
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=51.03 E-value=18 Score=30.59 Aligned_cols=10 Identities=40% Similarity=0.989 Sum_probs=5.4
Q ss_pred chhhhHHHHH
Q 009344 466 KWMAVAVTIV 475 (537)
Q Consensus 466 ~~~~~~~~~~ 475 (537)
+|++++|+++
T Consensus 1 RW~l~~iii~ 10 (130)
T PF12273_consen 1 RWVLFAIIIV 10 (130)
T ss_pred CeeeHHHHHH
Confidence 4765555443
No 139
>PF15038 Jiraiya: Jiraiya
Probab=50.24 E-value=1.9e+02 Score=25.80 Aligned_cols=26 Identities=19% Similarity=0.340 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCC
Q 009344 353 TTVVAVLIATIAFAAIFQVPGQFVDK 378 (537)
Q Consensus 353 ~~~va~liatvtf~a~~~~Pgg~~~~ 378 (537)
+.++++++|..+.+--|+..-+..+.
T Consensus 7 l~i~Sal~A~Lsl~llfql~~~~~~~ 32 (175)
T PF15038_consen 7 LCIVSALFALLSLILLFQLQPGRAEP 32 (175)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccccc
Confidence 46889999999999999888776654
No 140
>COG5522 Predicted integral membrane protein [Function unknown]
Probab=49.86 E-value=1.2e+02 Score=27.64 Aligned_cols=82 Identities=16% Similarity=0.246 Sum_probs=42.7
Q ss_pred HHHHHHHhhcCCCCCCCCCccccCCCCcccccccCCccchhHhhhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009344 361 ATIAFAAIFQVPGQFVDKPEEAVDGVALGEAHVSQKPAFIIFFVFDSIALFISLAVVVVQTSVVVIESKAKRQLMAVINK 440 (537)
Q Consensus 361 atvtf~a~~~~Pgg~~~~~~~~~~~~~~g~~~~~~~~~f~~f~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (537)
.+++|.|-++|--|+.+ .|++ .|..|+++--.-|.+.+.+++.+ ...+..+. ....+...
T Consensus 104 ig~sf~AlltPDl~~~~------------~p~l----~~~lffitH~svfls~v~~~vhf-reRpgksg---l~~svl~~ 163 (236)
T COG5522 104 IGISFMALLTPDLQYLQ------------VPWL----EFLLFFITHISVFLSAVILIVHF-RERPGKSG---LVMSVLVA 163 (236)
T ss_pred hhHHHHHHHcCcccccc------------chHH----HHHHHHHHHHHHHHHHHHHHHHh-ccCCCccc---hhHHHHHH
Confidence 45689999999877753 3333 36778887766555554444332 22232222 22233222
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc
Q 009344 441 LMWLACVLISVAYLAMSFIVVG 462 (537)
Q Consensus 441 l~~~~~~~~~~af~~~~~~v~~ 462 (537)
..|..+..+.=.+..+=|+.+.
T Consensus 164 ~~lg~~~lfinrrLGtNYlyls 185 (236)
T COG5522 164 ISLGIMCLFINRRLGTNYLYLS 185 (236)
T ss_pred HHHHHHHHHHHHHhcCceeEee
Confidence 3333333344455555566553
No 141
>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.
Probab=49.33 E-value=1.7e+02 Score=25.17 Aligned_cols=34 Identities=29% Similarity=0.259 Sum_probs=27.5
Q ss_pred ccccccCCccchhHhhhhHHHHHHHHHHHHHHHH
Q 009344 389 GEAHVSQKPAFIIFFVFDSIALFISLAVVVVQTS 422 (537)
Q Consensus 389 g~~~~~~~~~f~~f~~~~~~a~~~s~~~~~~~~~ 422 (537)
.+..+.+-++|..|+..|.++..-|+..+++.+.
T Consensus 39 ~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~ 72 (149)
T PF04535_consen 39 FTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIY 72 (149)
T ss_pred cceeecccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555677788999999999999999887766554
No 142
>COG2322 Predicted membrane protein [Function unknown]
Probab=48.56 E-value=1.9e+02 Score=25.42 Aligned_cols=23 Identities=13% Similarity=0.160 Sum_probs=13.5
Q ss_pred hhhhhHHHHHHHHHHHHhhcCCC
Q 009344 351 NSTTVVAVLIATIAFAAIFQVPG 373 (537)
Q Consensus 351 ~~~~~va~liatvtf~a~~~~Pg 373 (537)
-..+.++.++..++---++.|||
T Consensus 12 ~~vl~~a~va~~~~av~~~~P~g 34 (177)
T COG2322 12 AAVLGLASVAVVVIAVLAFSPAG 34 (177)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCC
Confidence 34455555555555556777777
No 143
>PRK01658 holin-like protein; Validated
Probab=47.55 E-value=1.6e+02 Score=24.59 Aligned_cols=8 Identities=25% Similarity=0.663 Sum_probs=4.1
Q ss_pred HhhcCCCC
Q 009344 367 AIFQVPGQ 374 (537)
Q Consensus 367 a~~~~Pgg 374 (537)
..+.+||+
T Consensus 27 l~lpiPGs 34 (122)
T PRK01658 27 LHLPIPGS 34 (122)
T ss_pred cCCCCCHH
Confidence 34555653
No 144
>PF06365 CD34_antigen: CD34/Podocalyxin family; InterPro: IPR013836 This family consists of several mammalian CD34 antigen proteins. The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation [, ]. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteristic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion [].
Probab=45.95 E-value=26 Score=31.98 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=25.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q 009344 468 MAVAVTIVGAVIMAATLGTMIYWVIRHRIEDS 499 (537)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (537)
+.|++.++|+++++++++..+|+++.+|..+.
T Consensus 101 ~lI~lv~~g~~lLla~~~~~~Y~~~~Rrs~~~ 132 (202)
T PF06365_consen 101 TLIALVTSGSFLLLAILLGAGYCCHQRRSWSK 132 (202)
T ss_pred EEEehHHhhHHHHHHHHHHHHHHhhhhccCCc
Confidence 66777778888888889989899888876543
No 145
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=45.51 E-value=2.1e+02 Score=28.14 Aligned_cols=61 Identities=18% Similarity=0.230 Sum_probs=36.5
Q ss_pred HHHhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHhHhhhhhhhhhhhhHHHHHHHHHHHHhh
Q 009344 309 TVSDIKHEVHYQLEHTRQTRRRVHGIAKRLHKMHAEGLNNAINSTTVVAVLIATIAFAAIF 369 (537)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~k~~~~~l~~~~~~~~~va~liatvtf~a~~ 369 (537)
...++..+.....+.....++......+.........+++..+.+++++++.+-.||-||+
T Consensus 217 ~~~dv~~~~~~l~~~~~~~~e~l~~l~d~~~~~~s~~~N~~mk~LTvvt~IflP~t~IaGi 277 (318)
T TIGR00383 217 YLRDIYDHILSLLEMIETYRELLSSLMDLYLSLVNNKMNEIMKILTVVSTIFIPLTFIAGI 277 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444443333333333444444444444444455556667778889999999999998866
No 146
>KOG0947 consensus Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily [RNA processing and modification]
Probab=44.74 E-value=22 Score=39.85 Aligned_cols=21 Identities=38% Similarity=0.494 Sum_probs=18.5
Q ss_pred hhHHHHHHHHHHHHhhcCCCC
Q 009344 354 TVVAVLIATIAFAAIFQVPGQ 374 (537)
Q Consensus 354 ~~va~liatvtf~a~~~~Pgg 374 (537)
.+|-+|+||=|||+|.|+|--
T Consensus 655 GlVKVLFATETFAMGVNMPAR 675 (1248)
T KOG0947|consen 655 GLVKVLFATETFAMGVNMPAR 675 (1248)
T ss_pred CceEEEeehhhhhhhcCCCce
Confidence 467889999999999999973
No 147
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=43.90 E-value=31 Score=28.73 Aligned_cols=7 Identities=43% Similarity=0.842 Sum_probs=3.0
Q ss_pred HHHHhhh
Q 009344 487 MIYWVIR 493 (537)
Q Consensus 487 ~~~~~~~ 493 (537)
+++|+++
T Consensus 83 li~y~ir 89 (122)
T PF01102_consen 83 LISYCIR 89 (122)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444443
No 148
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=43.48 E-value=1.3e+02 Score=27.42 Aligned_cols=18 Identities=33% Similarity=0.715 Sum_probs=10.3
Q ss_pred hhHhhhhHHHHHHHHHHH
Q 009344 400 IIFFVFDSIALFISLAVV 417 (537)
Q Consensus 400 ~~f~~~~~~a~~~s~~~~ 417 (537)
..|+++-.++..+++.++
T Consensus 6 i~F~~~a~l~i~sal~vv 23 (198)
T PRK06638 6 IAFYILALLAVLAALGVV 23 (198)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 356666666666555443
No 149
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=42.78 E-value=3.8e+02 Score=27.23 Aligned_cols=22 Identities=14% Similarity=0.181 Sum_probs=12.5
Q ss_pred hhhhhhhhHHHHHHHHHHHHhh
Q 009344 348 NAINSTTVVAVLIATIAFAAIF 369 (537)
Q Consensus 348 ~~~~~~~~va~liatvtf~a~~ 369 (537)
|....++-+.+++..+++..++
T Consensus 209 Nl~~~~l~l~tlv~sLsl~m~~ 230 (374)
T PF01528_consen 209 NLVLSLLGLETLVFSLSLMMAI 230 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566666666666544
No 150
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=41.31 E-value=1.5e+02 Score=24.15 Aligned_cols=28 Identities=21% Similarity=0.360 Sum_probs=15.1
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 009344 464 REKWMAVAVTIVGAVIMAATLGTMIYWVIR 493 (537)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (537)
..+|+....+++|. +..+....+|+++-
T Consensus 34 ~~~~im~ifmllG~--L~~l~S~~VYfwIG 61 (114)
T PF11023_consen 34 ASPIIMVIFMLLGL--LAILASTAVYFWIG 61 (114)
T ss_pred ccHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 45577766666663 33334444555543
No 151
>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT).
Probab=40.63 E-value=1.6e+02 Score=23.71 Aligned_cols=38 Identities=16% Similarity=0.294 Sum_probs=25.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009344 404 VFDSIALFISLAVVVVQTSVVVIESKAKRQLMAVINKLMWLACVLISVAYLAMSF 458 (537)
Q Consensus 404 ~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~af~~~~~ 458 (537)
+.++++++++++.+++ +.+ .+-|++++|-..+|+-.-.
T Consensus 34 y~~~L~~~~~m~gl~m-------r~K----------~~aW~al~~s~~S~an~k~ 71 (103)
T PF03669_consen 34 YMSFLGMIFSMAGLMM-------RNK----------WCAWAALFFSCQSFANMKS 71 (103)
T ss_pred HHHHHHHHHHHHHHHH-------HhH----------HHHHHHHHHHHHHHHcCCc
Confidence 4677888888776664 222 2678888888777766544
No 152
>COG4325 Predicted membrane protein [Function unknown]
Probab=40.42 E-value=2.1e+02 Score=28.82 Aligned_cols=26 Identities=15% Similarity=0.017 Sum_probs=17.2
Q ss_pred hhhhhHHHHHHHHHHHHhhcCCCCCC
Q 009344 351 NSTTVVAVLIATIAFAAIFQVPGQFV 376 (537)
Q Consensus 351 ~~~~~va~liatvtf~a~~~~Pgg~~ 376 (537)
+.+=+.++.-+.++-.-+|++|-+-.
T Consensus 36 ~~~WvipA~~vv~al~fgf~L~~~~R 61 (464)
T COG4325 36 GAVWVIPAFGVVIALGFGFVLSMIPR 61 (464)
T ss_pred cceeeehHHHHHHHHHHHHhhccccc
Confidence 44556666666666777888886644
No 153
>PRK11598 putative metal dependent hydrolase; Provisional
Probab=40.21 E-value=3e+02 Score=29.70 Aligned_cols=14 Identities=14% Similarity=0.335 Sum_probs=8.3
Q ss_pred HHHHHHHHHhhcCC
Q 009344 359 LIATIAFAAIFQVP 372 (537)
Q Consensus 359 liatvtf~a~~~~P 372 (537)
++.++-|.+.+|.|
T Consensus 17 ll~a~~~~~~~N~~ 30 (545)
T PRK11598 17 LLAAFYITLCLNIA 30 (545)
T ss_pred HHHHHHHHHHHhHH
Confidence 55555566666666
No 154
>PF01578 Cytochrom_C_asm: Cytochrome C assembly protein; InterPro: IPR002541 This entry consists of various proteins involved in cytochrome c assembly from mitochondria and bacteria; CycK from Rhizobium leguminosarum [], CcmC from Escherichia coli and Paracoccus denitrificans [, ] and orf240 from Triticum aestivum (Wheat) mitochondria []. The members of this family are probably integral membrane proteins with six predicted transmembrane helices that may comprise the membrane component of an ABC (ATP binding cassette) transporter complex. This transporter may be necessary for transport of some component needed for cytochrome c assembly. One member, R. leguminosarum CycK, contains a putative haem-binding motif []. Wheat orf240 also contains a putative haem-binding motif and is a proposed ABC transporter with c-type haem as its proposed substrate []. However it seems unlikely that all members of this family transport haem or c-type apocytochromes because P. denitrificans CcmC transports neither [].; GO: 0006461 protein complex assembly, 0008535 respiratory chain complex IV assembly, 0016020 membrane
Probab=40.05 E-value=3e+02 Score=25.24 Aligned_cols=22 Identities=18% Similarity=0.484 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHhhhhccccc
Q 009344 478 VIMAATLGTMIYWVIRHRIEDS 499 (537)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~ 499 (537)
++.++.+....+.+..++++++
T Consensus 85 ~~~ia~~~al~~l~~~~~Lk~~ 106 (214)
T PF01578_consen 85 AFAIAALAALLYLIQERRLKKK 106 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 3444444555566555555443
No 155
>KOG2417 consensus Predicted G-protein coupled receptor [Signal transduction mechanisms]
Probab=39.57 E-value=2e+02 Score=28.63 Aligned_cols=37 Identities=14% Similarity=0.198 Sum_probs=25.0
Q ss_pred CCccchhHhhhhHHHHHHHHHHHHHHHHhhhhhhHHH
Q 009344 395 QKPAFIIFFVFDSIALFISLAVVVVQTSVVVIESKAK 431 (537)
Q Consensus 395 ~~~~f~~f~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ 431 (537)
.+.....|+.+-++||.+++.-.+++--+-...+..+
T Consensus 37 ~~~~~Vq~Ifs~tfa~sc~lfeliifeii~vl~~~sr 73 (462)
T KOG2417|consen 37 VHNRVVQFIFSVTFAFSCSLFELIIFEIIDVLSPESR 73 (462)
T ss_pred HHhhheeeehhHHHHHHHHHHHHHHHHHHhhcChHHH
Confidence 3456788999999999999876665554333333333
No 156
>PF15050 SCIMP: SCIMP protein
Probab=37.63 E-value=36 Score=27.80 Aligned_cols=24 Identities=25% Similarity=0.602 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccc
Q 009344 474 IVGAVIMAATLGTMIYWVIRHRIE 497 (537)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~ 497 (537)
+++.+++-..+++++|.+.++-++
T Consensus 13 AVaII~vS~~lglIlyCvcR~~lR 36 (133)
T PF15050_consen 13 AVAIILVSVVLGLILYCVCRWQLR 36 (133)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444555556655544433
No 157
>PRK10582 cytochrome o ubiquinol oxidase subunit IV; Provisional
Probab=36.28 E-value=2.4e+02 Score=23.02 Aligned_cols=18 Identities=17% Similarity=0.300 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 009344 407 SIALFISLAVVVVQTSVV 424 (537)
Q Consensus 407 ~~a~~~s~~~~~~~~~~~ 424 (537)
.++|..|++.+++-++..
T Consensus 19 viGFiLSliLT~i~F~lv 36 (109)
T PRK10582 19 MTGFILSIILTVIPFWMV 36 (109)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 467777776655544433
No 158
>PF06011 TRP: Transient receptor potential (TRP) ion channel; InterPro: IPR010308 This family consists of hypothetical proteins of unknown function found in fungi.
Probab=35.81 E-value=1.7e+02 Score=30.45 Aligned_cols=23 Identities=9% Similarity=0.231 Sum_probs=13.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHHH
Q 009344 465 EKWMAVAVTIVGAVIMAATLGTM 487 (537)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
..|+.+++.++-+++++.++...
T Consensus 384 ~~~vg~vi~~i~~~v~~~~~i~~ 406 (438)
T PF06011_consen 384 RTVVGYVIIIINAIVLLILFILI 406 (438)
T ss_pred cchhhHHHHHHHHHHHHHHHHHH
Confidence 34677777766666555555444
No 159
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=35.50 E-value=28 Score=31.28 Aligned_cols=47 Identities=30% Similarity=0.382 Sum_probs=25.5
Q ss_pred CCCChHHHHHHHhCCHHHHH-HHHhcCC---CCcccCCCCCCCHHHHHHHc
Q 009344 230 TKGNSPLHIATRKGREQIVR-LLLANSE---TNLNGVNRTGETALDTAEKT 276 (537)
Q Consensus 230 ~~G~t~Lh~A~~~~~~~iv~-~Ll~~~~---~~~~~~d~~g~T~L~~A~~~ 276 (537)
.+-..|||-|+.-++.+++- ++++... ..+|-.|.+|..+|++|..+
T Consensus 220 ~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 220 GKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred CCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence 33445677776666666543 3333321 12455566666777766543
No 160
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=35.42 E-value=2.2e+02 Score=29.00 Aligned_cols=23 Identities=39% Similarity=0.329 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCC
Q 009344 354 TVVAVLIATIAFAAIFQVPGQFV 376 (537)
Q Consensus 354 ~~va~liatvtf~a~~~~Pgg~~ 376 (537)
.+|+-|++-.+-+.++.|-|+++
T Consensus 119 tvvgfla~i~a~~lg~~p~~~~~ 141 (441)
T KOG3788|consen 119 TVVGFLAAIAAIALGIIPEGDFD 141 (441)
T ss_pred HHHHHHHHHHHHHhccCccCCCc
Confidence 35555555555566777767654
No 161
>PF14851 FAM176: FAM176 family
Probab=35.37 E-value=1.2e+02 Score=26.48 Aligned_cols=13 Identities=38% Similarity=0.302 Sum_probs=5.8
Q ss_pred HHHHHHHhhhhcc
Q 009344 484 LGTMIYWVIRHRI 496 (537)
Q Consensus 484 ~~~~~~~~~~~~~ 496 (537)
+.++|.++++-.+
T Consensus 35 lLtLcllV~risc 47 (153)
T PF14851_consen 35 LLTLCLLVIRISC 47 (153)
T ss_pred HHHHHHHHhhhee
Confidence 3344444444444
No 162
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=34.97 E-value=90 Score=24.80 Aligned_cols=25 Identities=12% Similarity=0.056 Sum_probs=12.1
Q ss_pred HHHHHHHHHhhhhccccchhhhhhc
Q 009344 482 ATLGTMIYWVIRHRIEDSNMRSIRK 506 (537)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (537)
.++.+++++.+++.+..+...+.|+
T Consensus 28 l~~SlLIalaaKC~~~~k~~~SY~H 52 (102)
T PF15176_consen 28 LVTSLLIALAAKCPVWYKYLASYRH 52 (102)
T ss_pred HHHHHHHHHHHHhHHHHHHHhcccc
Confidence 3344445555666655444444443
No 163
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.92 E-value=37 Score=33.46 Aligned_cols=14 Identities=0% Similarity=-0.157 Sum_probs=8.1
Q ss_pred CCccchhHhhhhHH
Q 009344 395 QKPAFIIFFVFDSI 408 (537)
Q Consensus 395 ~~~~f~~f~~~~~~ 408 (537)
.+..++.++++-.+
T Consensus 184 ep~~~~~~vl~~~f 197 (372)
T KOG2927|consen 184 EPRPLMWQVLGVLF 197 (372)
T ss_pred cCCchhHHHHHHHH
Confidence 45557777665443
No 164
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=34.44 E-value=2.2e+02 Score=25.77 Aligned_cols=17 Identities=18% Similarity=0.548 Sum_probs=9.6
Q ss_pred hHhhhhHHHHHHHHHHH
Q 009344 401 IFFVFDSIALFISLAVV 417 (537)
Q Consensus 401 ~f~~~~~~a~~~s~~~~ 417 (537)
.|+++-.+++.+++.++
T Consensus 4 ~F~~~a~~~l~sal~vv 20 (186)
T MTH00057 4 LFYLFALGVIISGIMVI 20 (186)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45666666666555444
No 165
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=34.18 E-value=1.7e+02 Score=20.78 Aligned_cols=37 Identities=27% Similarity=0.391 Sum_probs=18.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009344 423 VVVIESKAKRQLMAVINKLMWLACVLISVAYLAMSFIVV 461 (537)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~af~~~~~~v~ 461 (537)
+..+|++.+-...... +-.++..+|.++..-..++|.
T Consensus 19 i~~sR~Klk~~~lk~i--~~~vAy~lli~~gli~~~vV~ 55 (58)
T PF10966_consen 19 IYFSRYKLKGKFLKFI--VSLVAYILLIVSGLIMFFVVF 55 (58)
T ss_pred HHHHHHHHhChHHHHH--HHHHHHHHHHHHHHheEEEEe
Confidence 3356777665333332 233555566555555555443
No 166
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=34.17 E-value=2.9e+02 Score=26.01 Aligned_cols=8 Identities=13% Similarity=0.119 Sum_probs=3.1
Q ss_pred CcchhhhH
Q 009344 464 REKWMAVA 471 (537)
Q Consensus 464 ~~~~~~~~ 471 (537)
...|....
T Consensus 206 ~~~~~~~l 213 (234)
T cd02433 206 RSPGISAL 213 (234)
T ss_pred CcHHHHHH
Confidence 33344333
No 167
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=34.03 E-value=1.3e+02 Score=31.34 Aligned_cols=105 Identities=16% Similarity=0.115 Sum_probs=43.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccCCCCchHHHHHHhCCCH
Q 009344 132 TALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEVLKTLLAADSVIAIRTDKKGQTALHMAVKGQNI 211 (537)
Q Consensus 132 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 211 (537)
+=+.+|...|+.+.+..+.+...+.. .-...-..|...|+.++++.-+++..+.. ..+.+....|+.
T Consensus 323 ~rFeLAl~lg~L~~A~~~a~~~~~~~-----~W~~Lg~~AL~~g~~~lAe~c~~k~~d~~--------~L~lLy~~~g~~ 389 (443)
T PF04053_consen 323 HRFELALQLGNLDIALEIAKELDDPE-----KWKQLGDEALRQGNIELAEECYQKAKDFS--------GLLLLYSSTGDR 389 (443)
T ss_dssp HHHHHHHHCT-HHHHHHHCCCCSTHH-----HHHHHHHHHHHTTBHHHHHHHHHHCT-HH--------HHHHHHHHCT-H
T ss_pred HHhHHHHhcCCHHHHHHHHHhcCcHH-----HHHHHHHHHHHcCCHHHHHHHHHhhcCcc--------ccHHHHHHhCCH
Confidence 44555555555555554443322110 00112234445566666665555443322 223444455555
Q ss_pred HHHHHHHHhCCCCccccCCCCChHHHHHHHhCCH-HHHHHHHhc
Q 009344 212 EVVQELIKAEPASVNMVDTKGNSPLHIATRKGRE-QIVRLLLAN 254 (537)
Q Consensus 212 ~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~-~iv~~Ll~~ 254 (537)
+-++.|.+.. ....+-+.+++.+...|+. ++++.|++.
T Consensus 390 ~~L~kl~~~a-----~~~~~~n~af~~~~~lgd~~~cv~lL~~~ 428 (443)
T PF04053_consen 390 EKLSKLAKIA-----EERGDINIAFQAALLLGDVEECVDLLIET 428 (443)
T ss_dssp HHHHHHHHHH-----HHTT-HHHHHHHHHHHT-HHHHHHHHHHT
T ss_pred HHHHHHHHHH-----HHccCHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 5555554321 0011123445555555443 345555443
No 168
>PTZ00370 STEVOR; Provisional
Probab=33.81 E-value=74 Score=30.57 Aligned_cols=17 Identities=29% Similarity=0.364 Sum_probs=8.9
Q ss_pred hhhhhHHHHHHHHHHHH
Q 009344 351 NSTTVVAVLIATIAFAA 367 (537)
Q Consensus 351 ~~~~~va~liatvtf~a 367 (537)
-+|.|.+++...+..+|
T Consensus 177 ~~CsVGSafLT~IGLaA 193 (296)
T PTZ00370 177 CSCSLGSALLTLIGLAA 193 (296)
T ss_pred EeeccHHHHHHHHHHHH
Confidence 44556665555554433
No 169
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=32.77 E-value=9.3 Score=40.20 Aligned_cols=26 Identities=8% Similarity=-0.119 Sum_probs=16.0
Q ss_pred ccccCCCCCHHHHHHHcCCHHHHHHH
Q 009344 55 PKQNQSGETALYVAAEYGHVDLVAEM 80 (537)
Q Consensus 55 ~~~n~~g~TpLh~A~~~g~~~iv~~L 80 (537)
......+.++.+++...|....+...
T Consensus 49 ~~~~s~~~~~~~l~~~~g~~~~~~~a 74 (503)
T KOG0513|consen 49 NQGVSLAYLELRLQNIDGDPSAARLA 74 (503)
T ss_pred hhhhhhcccHHHHHhccCChHhhHhh
Confidence 33445567777777777776655443
No 170
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=32.68 E-value=1.8e+02 Score=21.91 Aligned_cols=15 Identities=33% Similarity=0.505 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHh
Q 009344 444 LACVLISVAYLAMSF 458 (537)
Q Consensus 444 ~~~~~~~~af~~~~~ 458 (537)
.+++++.+.|+...+
T Consensus 20 ~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 20 SAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555555555655554
No 171
>MTH00213 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=32.39 E-value=1.1e+02 Score=28.05 Aligned_cols=13 Identities=31% Similarity=0.383 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHH
Q 009344 475 VGAVIMAATLGTM 487 (537)
Q Consensus 475 ~~~~~~~~~~~~~ 487 (537)
+|++.++.++..|
T Consensus 58 VGAIaVLFLFVIM 70 (239)
T MTH00213 58 VGAICIIFLFVIM 70 (239)
T ss_pred HhHHHHHHHHHHH
Confidence 4444444444333
No 172
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=32.28 E-value=4.9e+02 Score=25.43 Aligned_cols=28 Identities=14% Similarity=0.374 Sum_probs=23.0
Q ss_pred hhhccCCcchhhhHHHHHHHHHHHHHHH
Q 009344 458 FIVVGKREKWMAVAVTIVGAVIMAATLG 485 (537)
Q Consensus 458 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (537)
.-++|..+.+.++.++++|.+++..+.+
T Consensus 191 ~~viP~g~~~~~ViaYclGMalFTmIMG 218 (308)
T PF06166_consen 191 SSVIPEGNRFIGVIAYCLGMALFTMIMG 218 (308)
T ss_pred HhhcCCCCeehhHHHHHHHHHHHHHHHc
Confidence 4567888899999999999988887665
No 173
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=32.10 E-value=22 Score=31.90 Aligned_cols=47 Identities=21% Similarity=0.080 Sum_probs=23.8
Q ss_pred CCCCHHHHHHHcCCHHHHH-HHHHcCC--cccccccCCCCChHHHHHHHc
Q 009344 60 SGETALYVAAEYGHVDLVA-EMIKCYD--LADAGIKARNGFDAFHIAAKE 106 (537)
Q Consensus 60 ~g~TpLh~A~~~g~~~iv~-~Ll~~~~--~~~~~~~~~~g~t~Lh~A~~~ 106 (537)
+-+.|||-|+.-+..+++- |+++... +...|..|.+|..+|.+|...
T Consensus 221 kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 221 KTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred CCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence 3455666666666666543 3343221 123344555666666665543
No 174
>PF11395 DUF2873: Protein of unknown function (DUF2873); InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=32.02 E-value=1e+02 Score=19.39 Aligned_cols=22 Identities=9% Similarity=0.433 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 009344 470 VAVTIVGAVIMAATLGTMIYWV 491 (537)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~ 491 (537)
.+.|+++...+++++...++|+
T Consensus 9 fylc~l~~llflv~imliif~f 30 (43)
T PF11395_consen 9 FYLCFLSFLLFLVIIMLIIFWF 30 (43)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666665555555555554
No 175
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=31.96 E-value=4.6e+02 Score=25.95 Aligned_cols=67 Identities=13% Similarity=0.217 Sum_probs=43.1
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHhHhhhhhhhhhhhhHHHHHHHHHHHHhh
Q 009344 303 ARELKQTVSDIKHEVHYQLEHTRQTRRRVHGIAKRLHKMHAEGLNNAINSTTVVAVLIATIAFAAIF 369 (537)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~k~~~~~l~~~~~~~~~va~liatvtf~a~~ 369 (537)
..+.+....++..+.....+....-++.+....+.....-...+++....+++++++.+=.||-|||
T Consensus 215 ~~~~~~~l~dv~~~~~~~~~~~~~~~~~l~~l~d~~~s~is~~~N~imk~LTi~s~iflPpTlIagi 281 (322)
T COG0598 215 SEEDREYLRDVLDHLTQLIEMLEALRERLSSLLDAYLSLINNNQNEIMKILTIVSTIFLPPTLITGF 281 (322)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHcc
Confidence 3445555566655555555555555555555555555555666677778888998888888887744
No 176
>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]
Probab=31.35 E-value=1.5e+02 Score=27.69 Aligned_cols=59 Identities=12% Similarity=0.187 Sum_probs=26.6
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhhhhhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009344 402 FFVFDSIALFISLAVVVVQTSVVVIESKAKRQ----LMAVINKLMWLACVLISVAYLAMSFIV 460 (537)
Q Consensus 402 f~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~af~~~~~~v 460 (537)
.+.+|.+-..++++.+.+-++........... ....+..++.+....+.++|..-.-.+
T Consensus 13 lf~~N~~~~l~G~~ll~~giw~~~~~~~~~~~~~~~~~~~~~ili~~G~v~~~v~flGc~Ga~ 75 (237)
T KOG3882|consen 13 LFLLNLLFWLLGLLLLAVGIWLLADKGFLSSLLESDFLVPAYILIAVGGVVFLVGFLGCCGAL 75 (237)
T ss_pred HHHHHHHHHHHHHHHHHhhhheeEeccchhhccccchhcchhhhhhhhHHHHHHHHhhhhhhH
Confidence 45566666666665555544433222211111 112233334455555556665433333
No 177
>PRK09546 zntB zinc transporter; Reviewed
Probab=31.28 E-value=5.1e+02 Score=25.58 Aligned_cols=27 Identities=19% Similarity=0.325 Sum_probs=15.7
Q ss_pred HhhhhhhhhhhhhHHHHHHHHHHHHhh
Q 009344 343 AEGLNNAINSTTVVAVLIATIAFAAIF 369 (537)
Q Consensus 343 ~~~l~~~~~~~~~va~liatvtf~a~~ 369 (537)
.+.+++....+.+++++..=.||=||+
T Consensus 257 s~~~N~~m~~Ltilt~IflPlT~IaGi 283 (324)
T PRK09546 257 AEAMNRRTYTMSLMAMVFLPTTFLTGL 283 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333444444567777766666666654
No 178
>PHA03237 envelope glycoprotein M; Provisional
Probab=31.15 E-value=6.1e+02 Score=26.22 Aligned_cols=22 Identities=14% Similarity=0.394 Sum_probs=14.3
Q ss_pred hhhhhhhhHHHHHHHHHHHHhh
Q 009344 348 NAINSTTVVAVLIATIAFAAIF 369 (537)
Q Consensus 348 ~~~~~~~~va~liatvtf~a~~ 369 (537)
|....++-+.++++.+++..++
T Consensus 226 Nl~~~~lgl~~lv~sL~l~m~~ 247 (424)
T PHA03237 226 NLVSGVYGLSLIIASLMLGMLL 247 (424)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445566667777777776655
No 179
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=30.82 E-value=1.2e+02 Score=22.75 Aligned_cols=6 Identities=33% Similarity=0.811 Sum_probs=2.2
Q ss_pred HHHHHH
Q 009344 475 VGAVIM 480 (537)
Q Consensus 475 ~~~~~~ 480 (537)
++.+|+
T Consensus 12 m~iVF~ 17 (79)
T PF04277_consen 12 MGIVFL 17 (79)
T ss_pred HHHHHH
Confidence 333333
No 180
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=30.68 E-value=6.3e+02 Score=30.67 Aligned_cols=43 Identities=14% Similarity=0.172 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhhcccCCCCC
Q 009344 471 AVTIVGAVIMAATLGTMIYWVIRHRIEDSNMRSIRKSSMGSRS 513 (537)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (537)
+|++....+++.++++++.++.-++......|.+||-..-+|+
T Consensus 952 vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRS 994 (1381)
T KOG0054|consen 952 VISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRS 994 (1381)
T ss_pred HhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccc
Confidence 3344444445555555555555556666678888886443443
No 181
>PF13903 Claudin_2: PMP-22/EMP/MP20/Claudin tight junction
Probab=30.54 E-value=3.2e+02 Score=23.60 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCcc
Q 009344 441 LMWLACVLISVAYLAMSFIVVGKREK 466 (537)
Q Consensus 441 l~~~~~~~~~~af~~~~~~v~~~~~~ 466 (537)
++.++++.+.+|+..+.+....++..
T Consensus 74 ~~~l~~~~~~~a~~~~~~~~~~~~~~ 99 (172)
T PF13903_consen 74 FLILGLLLLLFAFVFALIGFCKRSYT 99 (172)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccc
Confidence 45556666666666555555544443
No 182
>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []. It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane
Probab=30.53 E-value=3.2e+02 Score=22.80 Aligned_cols=22 Identities=23% Similarity=0.197 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc
Q 009344 440 KLMWLACVLISVAYLAMSFIVV 461 (537)
Q Consensus 440 ~l~~~~~~~~~~af~~~~~~v~ 461 (537)
.+.++++.++.+++.++....-
T Consensus 40 ~lq~l~~~~~~~G~~~~~~~~~ 61 (137)
T PF03188_consen 40 ILQVLALVFAIIGFVAIFINKN 61 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 3566888888888888776554
No 183
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=30.37 E-value=64 Score=31.13 Aligned_cols=57 Identities=11% Similarity=0.302 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh----ccCCcchhhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 009344 436 AVINKLMWLACVLISVAYLAMSFIV----VGKREKWMAVAVTIVGAVIMAATLGTMIYWVIRH 494 (537)
Q Consensus 436 ~~~~~l~~~~~~~~~~af~~~~~~v----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (537)
.....+.+++++++-++|++|.|=+ +|... ..+...++..+++.+++..++++++++
T Consensus 232 ~~m~~LT~~t~iflPlt~i~g~fGMN~~~~p~~~--~~~g~~~~~~~~~~~~~~~~~~~~~kR 292 (292)
T PF01544_consen 232 RVMKVLTIVTAIFLPLTFITGIFGMNFKGMPELD--WPYGYFFVIILGLMILVAILLYWWFKR 292 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTS-SS---SSS--SSS-SHHH--HHHHHHHHHHHHCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccCCCccC--CccHHHHHHHHHHHHHHHHHHHHheeC
No 184
>COG2246 Predicted membrane protein [Function unknown]
Probab=30.16 E-value=3.3e+02 Score=23.21 Aligned_cols=28 Identities=11% Similarity=0.141 Sum_probs=18.8
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhhhhhhH
Q 009344 402 FFVFDSIALFISLAVVVVQTSVVVIESK 429 (537)
Q Consensus 402 f~~~~~~a~~~s~~~~~~~~~~~~~~~~ 429 (537)
..+++.+|+.+|++.-++.=-..+++.+
T Consensus 42 ~~~A~~~a~~~~ii~sf~~N~~wTF~~~ 69 (139)
T COG2246 42 YALANAIAYEAAIIFSFVLNRRWTFRDR 69 (139)
T ss_pred hHHHHHHHHHHHHHHHHHHHceeeEeec
Confidence 4568999999988776655444444444
No 185
>PRK01821 hypothetical protein; Provisional
Probab=30.14 E-value=3.4e+02 Score=23.00 Aligned_cols=9 Identities=22% Similarity=0.501 Sum_probs=4.6
Q ss_pred HHhhcCCCC
Q 009344 366 AAIFQVPGQ 374 (537)
Q Consensus 366 ~a~~~~Pgg 374 (537)
...+.+||+
T Consensus 31 ~l~lpiPGs 39 (133)
T PRK01821 31 LLPITIPGS 39 (133)
T ss_pred HcCCCCcHH
Confidence 344556653
No 186
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=30.01 E-value=50 Score=36.55 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 009344 472 VTIVGAVIMAATLGTMIYWV 491 (537)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~ 491 (537)
.-.||+.++..-+++-.|+-
T Consensus 156 ah~igypvv~~g~~~~~y~~ 175 (697)
T PF09726_consen 156 AHCIGYPVVTLGFGFKSYVS 175 (697)
T ss_pred HhhcCCceeEeeccHHHHHH
Confidence 34456655555555555543
No 187
>PRK10692 hypothetical protein; Provisional
Probab=29.86 E-value=2.6e+02 Score=21.57 Aligned_cols=30 Identities=20% Similarity=0.025 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 009344 434 LMAVINKLMWLACVLISVAYLAMSFIVVGK 463 (537)
Q Consensus 434 ~~~~~~~l~~~~~~~~~~af~~~~~~v~~~ 463 (537)
...+.+.||.+.++.|.+.....+.--+++
T Consensus 6 a~~~GN~lMglGmv~Mv~gigysi~~~i~~ 35 (92)
T PRK10692 6 ASLLGNVLMGLGLVVMVVGVGYSILNQLPQ 35 (92)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 344566788888888877655555544443
No 188
>PF13994 PgaD: PgaD-like protein
Probab=29.51 E-value=3.3e+02 Score=23.17 Aligned_cols=31 Identities=16% Similarity=0.317 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009344 432 RQLMAVINKLMWLACVLISVAYLAMSFIVVG 462 (537)
Q Consensus 432 ~~~~~~~~~l~~~~~~~~~~af~~~~~~v~~ 462 (537)
+..-.+...++|...+.+...+++++.-++.
T Consensus 14 r~~~~~lT~~~W~~~~yL~~pl~~ll~~ll~ 44 (138)
T PF13994_consen 14 RLIDYFLTLLFWGGFIYLWRPLLTLLAWLLG 44 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3334445556777777777777665554443
No 189
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=29.38 E-value=3.9e+02 Score=26.44 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 009344 443 WLACVLISVAYLAMSFIVVGKREKWMAVAVTIVGAVIMAATLGTMIYW 490 (537)
Q Consensus 443 ~~~~~~~~~af~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
.+.++++++|+..|+..|...+..|.=+++-++-+++++.+....++-
T Consensus 216 ~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~ 263 (317)
T KOG3030|consen 216 LLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFP 263 (317)
T ss_pred HHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcc
Confidence 356677788899999999999889997776555555555444444433
No 190
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.33 E-value=2.8e+02 Score=21.75 Aligned_cols=17 Identities=18% Similarity=-0.017 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009344 441 LMWLACVLISVAYLAMS 457 (537)
Q Consensus 441 l~~~~~~~~~~af~~~~ 457 (537)
+++.++++....|++-.
T Consensus 32 lti~aiVg~i~Gf~~Qq 48 (101)
T KOG4112|consen 32 LTIGAIVGFIYGFAQQQ 48 (101)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56667666666665543
No 191
>PHA03239 envelope glycoprotein M; Provisional
Probab=29.13 E-value=6.6e+02 Score=25.99 Aligned_cols=22 Identities=23% Similarity=0.099 Sum_probs=13.9
Q ss_pred hhhhhhhhHHHHHHHHHHHHhh
Q 009344 348 NAINSTTVVAVLIATIAFAAIF 369 (537)
Q Consensus 348 ~~~~~~~~va~liatvtf~a~~ 369 (537)
|....++-+.++++.+++..++
T Consensus 232 Nl~~~~lgl~~lv~sLsl~m~~ 253 (429)
T PHA03239 232 NLFCALFGIDHLILCLLGALIM 253 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556667777777776655
No 192
>PF10812 DUF2561: Protein of unknown function (DUF2561); InterPro: IPR024381 This family of proteins with unknown function appears to be found predominantly in Mycobacterium spp.
Probab=29.01 E-value=1.9e+02 Score=26.21 Aligned_cols=48 Identities=25% Similarity=0.343 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhh--------ccCCcchhhhHHHHHHHHHHHHHHHHH
Q 009344 440 KLMWLACVLISVAYLAMSFIV--------VGKREKWMAVAVTIVGAVIMAATLGTM 487 (537)
Q Consensus 440 ~l~~~~~~~~~~af~~~~~~v--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (537)
...|++++++++|-..++-=. -+++..|+.+.|.++++.+++.-++++
T Consensus 29 aaiWLa~lG~~VaA~VaL~Dlgrg~~~~s~ss~T~WvLY~VI~VSaaVIagAVPlL 84 (207)
T PF10812_consen 29 AAIWLAALGVSVAATVALVDLGRGFHESSGSSGTPWVLYAVIGVSAAVIAGAVPLL 84 (207)
T ss_pred HHHHHHHHHHHHHHhheeecccCCccCcCCCCCCCEeehHHHHHHHHHHHHHHHHH
Confidence 357888888887544332211 134567998888888776666655433
No 193
>PF06703 SPC25: Microsomal signal peptidase 25 kDa subunit (SPC25); InterPro: IPR009582 This family consists of several microsomal signal peptidase 25 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains [].; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=28.47 E-value=2.4e+02 Score=24.66 Aligned_cols=30 Identities=13% Similarity=0.122 Sum_probs=15.5
Q ss_pred ccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 009344 461 VGKREKWMAVAVTIVGAVIMAATLGTMIYW 490 (537)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
.|.........+|+++..++..++....++
T Consensus 50 ~~f~~s~~~~~~~v~~YfiLs~il~~~~~~ 79 (162)
T PF06703_consen 50 YPFPESKPYLIICVILYFILSGILTLYSYF 79 (162)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455556666565555555444443
No 194
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=28.06 E-value=6.4e+02 Score=28.00 Aligned_cols=22 Identities=9% Similarity=0.471 Sum_probs=12.3
Q ss_pred cHhHHHHHcCCHHHHHHHHccC
Q 009344 24 TALHSAARAGNLDEVKDILTGT 45 (537)
Q Consensus 24 t~Lh~Aa~~g~~~~v~~Ll~~~ 45 (537)
+.+..-++.|+.+....+++..
T Consensus 264 ~Li~~y~k~g~~~~A~~vf~~m 285 (697)
T PLN03081 264 ALIDMYSKCGDIEDARCVFDGM 285 (697)
T ss_pred HHHHHHHHCCCHHHHHHHHHhC
Confidence 3445555666666666665543
No 195
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=27.80 E-value=3.6e+02 Score=24.08 Aligned_cols=110 Identities=8% Similarity=0.133 Sum_probs=0.0
Q ss_pred chhHhhhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHhhhccCCcchhhh
Q 009344 399 FIIFFVFDSIALFISLAVVVVQTSVVVIESKAKRQLMAVINKLMW--------LACVLISVAYLAMSFIVVGKREKWMAV 470 (537)
Q Consensus 399 f~~f~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~af~~~~~~v~~~~~~~~~~ 470 (537)
+..|+++=+..=..|++.+.+--..+|. ..-.-...+.+.++| ++++|+..+..+.....+. -+.
T Consensus 68 lIlFVLAl~s~p~ialimi~iAs~llP~--PsLVIaYCl~mqi~~~~~~~~~gMsIvcv~~Si~ti~~~~~s-----~s~ 140 (189)
T PF05313_consen 68 LILFVLALTSTPLIALIMIIIASLLLPF--PSLVIAYCLSMQIYNPGANNNVGMSIVCVIMSIITIIVNSVS-----GSS 140 (189)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHHcCc--cHHHHHHHHHheeecCCCcceehhHHHHHHHHHHHHHHHhhh-----HhH
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcc-ccchhhhhhcccCCCCCCC
Q 009344 471 AVTIVGAVIMAATLGTMIYWVIRHRI-EDSNMRSIRKSSMGSRSKS 515 (537)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 515 (537)
....+..++++.++...++-+-++.. +.+..+.-+|...+....+
T Consensus 141 ~~~ti~yIiL~iLf~~Ya~nl~~~~~~~~~~~~~C~r~~~~g~k~~ 186 (189)
T PF05313_consen 141 GAYTISYIILAILFCIYAFNLTGRSRIRSSSSTKCPREVYAGNKYN 186 (189)
T ss_pred HHHHHHHHHHHHHHHHheeeccchhhcccCchhhchhhccCccccc
No 196
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=27.30 E-value=13 Score=39.11 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=45.3
Q ss_pred CCCchHHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCCcccCCCCCCCHHHHHHH
Q 009344 196 KKGQTALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETNLNGVNRTGETALDTAEK 275 (537)
Q Consensus 196 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~T~L~~A~~ 275 (537)
....++++........+.+..++. .+..-...+.+|+|+||.+...++. . .-+...|-++.+|+++...
T Consensus 134 ~~~~~~~~~~~s~~~~~~~~~~l~-~~~~~~~~~~~g~t~L~~tl~~~~~--~--------~~i~~ldl~~~~P~lf~~~ 202 (503)
T KOG0513|consen 134 GDLNLALRILVSGDKYSGAEVLLT-KYEIADAREVLGNTKLHLTLTKENL--L--------VVIPCLDLKSLTPNLFSIY 202 (503)
T ss_pred cccccceeeeecCccccceeeccc-ccccchhhhhcCCceeeeeccCCCc--c--------eEEEeeccCcCCceeeeee
Confidence 345667777777777777766666 3355555667888888888887765 1 2233344455677766655
Q ss_pred cCc
Q 009344 276 TGH 278 (537)
Q Consensus 276 ~~~ 278 (537)
...
T Consensus 203 ~~~ 205 (503)
T KOG0513|consen 203 DAL 205 (503)
T ss_pred ccc
Confidence 433
No 197
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=27.08 E-value=86 Score=32.73 Aligned_cols=161 Identities=16% Similarity=0.119 Sum_probs=91.9
Q ss_pred HHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCcHHH
Q 009344 100 FHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVEVLNFLIEAESSLITISRSNGKTALHSAARNGRLEV 179 (537)
Q Consensus 100 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~ 179 (537)
+..|+.+++.+-+..+++...-+.......|.....+.-..|..+++-.+.+ +-.+=+.+|...|+++.
T Consensus 268 fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~-----------D~~~rFeLAl~lg~L~~ 336 (443)
T PF04053_consen 268 FKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT-----------DPDHRFELALQLGNLDI 336 (443)
T ss_dssp HHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS------------HHHHHHHHHHCT-HHH
T ss_pred HHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC-----------ChHHHhHHHHhcCCHHH
Confidence 5678889998886555542211111112235566666667777776655532 12356889999999999
Q ss_pred HHHHHhcCCccccccCCCCch-HHHHHHhCCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHhCCHHHHHHHHhcCCCC
Q 009344 180 LKTLLAADSVIAIRTDKKGQT-ALHMAVKGQNIEVVQELIKAEPASVNMVDTKGNSPLHIATRKGREQIVRLLLANSETN 258 (537)
Q Consensus 180 v~~Ll~~~~~~~~~~d~~g~t-~Lh~A~~~g~~~~v~~Ll~~~~~~i~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~~~~~ 258 (537)
+..+.+...+.. -|. .=..|...|+.++++.-+++. .+ - ...+.+....|+.+-++.|.+..
T Consensus 337 A~~~a~~~~~~~------~W~~Lg~~AL~~g~~~lAe~c~~k~-~d-----~--~~L~lLy~~~g~~~~L~kl~~~a--- 399 (443)
T PF04053_consen 337 ALEIAKELDDPE------KWKQLGDEALRQGNIELAEECYQKA-KD-----F--SGLLLLYSSTGDREKLSKLAKIA--- 399 (443)
T ss_dssp HHHHCCCCSTHH------HHHHHHHHHHHTTBHHHHHHHHHHC-T------H--HHHHHHHHHCT-HHHHHHHHHHH---
T ss_pred HHHHHHhcCcHH------HHHHHHHHHHHcCCHHHHHHHHHhh-cC-----c--cccHHHHHHhCCHHHHHHHHHHH---
Confidence 988876543211 122 234677899999999988876 22 2 24566777788888777776432
Q ss_pred cccCCCCCCCHHHHHHHcCcH-HHHHHHHHcCh
Q 009344 259 LNGVNRTGETALDTAEKTGHS-NLAALLREHGV 290 (537)
Q Consensus 259 ~~~~d~~g~T~L~~A~~~~~~-~i~~~L~~~g~ 290 (537)
....+-+.+++.+...|+. +++++|.+.|-
T Consensus 400 --~~~~~~n~af~~~~~lgd~~~cv~lL~~~~~ 430 (443)
T PF04053_consen 400 --EERGDINIAFQAALLLGDVEECVDLLIETGR 430 (443)
T ss_dssp --HHTT-HHHHHHHHHHHT-HHHHHHHHHHTT-
T ss_pred --HHccCHHHHHHHHHHcCCHHHHHHHHHHcCC
Confidence 1112223466667666665 67888887764
No 198
>COG3833 MalG ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism]
Probab=26.74 E-value=4.8e+02 Score=25.10 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=22.6
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009344 466 KWMAVAVTIVGAVIMAATLGTMIYWVIRHRIED 498 (537)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (537)
.|-.+.+++-|++.+-..+....+-.+...+++
T Consensus 143 ~~gLil~Y~gG~ip~nt~l~Kgy~DtIP~sldE 175 (282)
T COG3833 143 LWGLILAYLGGAIPMNTWLIKGYFDTIPKSLDE 175 (282)
T ss_pred HHHHHHHHhcCchHHHHHHHHhhhhcCCccHHH
Confidence 477777777777767777777666666655553
No 199
>CHL00016 ndhG NADH dehydrogenase subunit 6
Probab=26.74 E-value=3.2e+02 Score=24.55 Aligned_cols=14 Identities=21% Similarity=0.242 Sum_probs=6.3
Q ss_pred hHhhhhHHHHHHHH
Q 009344 401 IFFVFDSIALFISL 414 (537)
Q Consensus 401 ~f~~~~~~a~~~s~ 414 (537)
.|+++-.++..+++
T Consensus 11 ~F~~~a~~~i~sal 24 (182)
T CHL00016 11 LLVFLGSGLILGSL 24 (182)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444443
No 200
>PF05624 LSR: Lipolysis stimulated receptor (LSR); InterPro: IPR008664 This domain consists of mammalian LISCH7 protein homologues. LISCH7 is a liver-specific BHLH-ZIP transcription factor.
Probab=26.25 E-value=49 Score=21.94 Aligned_cols=20 Identities=30% Similarity=0.778 Sum_probs=13.7
Q ss_pred hhhhHHHHHHHHHHHHHHHH
Q 009344 467 WMAVAVTIVGAVIMAATLGT 486 (537)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~ 486 (537)
|+.+...++|+++++.+++.
T Consensus 2 Wl~V~~iilg~~ll~~Ligi 21 (49)
T PF05624_consen 2 WLFVVLIILGALLLLLLIGI 21 (49)
T ss_pred eEEEeHHHHHHHHHHHHHHH
Confidence 77777777777666666654
No 201
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=25.95 E-value=5e+02 Score=23.52 Aligned_cols=10 Identities=30% Similarity=0.763 Sum_probs=4.7
Q ss_pred hhhhhhcccC
Q 009344 500 NMRSIRKSSM 509 (537)
Q Consensus 500 ~~~~~~~~~~ 509 (537)
.+++.||...
T Consensus 106 ~~~~~~k~~~ 115 (197)
T PRK12585 106 QLRSVKKDDI 115 (197)
T ss_pred HHHHHHhhhh
Confidence 3444555443
No 202
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=25.86 E-value=1.4e+02 Score=26.72 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=21.5
Q ss_pred hHhhhhHHHHHHHHHHHHHHHH-hhhhhhH
Q 009344 401 IFFVFDSIALFISLAVVVVQTS-VVVIESK 429 (537)
Q Consensus 401 ~f~~~~~~a~~~s~~~~~~~~~-~~~~~~~ 429 (537)
.|.++|.+|..+-+.+|..-+. |+.+++.
T Consensus 39 eY~vsNiisv~Sgll~I~~GI~AIvlSrnl 68 (188)
T PF12304_consen 39 EYAVSNIISVTSGLLSIICGIVAIVLSRNL 68 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHhHHHHhhhccC
Confidence 5889999999999888766554 5555543
No 203
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=25.78 E-value=6.5e+02 Score=24.88 Aligned_cols=25 Identities=4% Similarity=0.198 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q 009344 436 AVINKLMWLACVLISVAYLAMSFIV 460 (537)
Q Consensus 436 ~~~~~l~~~~~~~~~~af~~~~~~v 460 (537)
.+...+-.++++++..+|+||+|=+
T Consensus 260 ~imk~LTi~s~iflPpTlIagiyGM 284 (322)
T COG0598 260 EIMKILTIVSTIFLPPTLITGFYGM 284 (322)
T ss_pred HHHHHHHHHHHHHHhhHHHHccccc
Confidence 4445567788899999999999833
No 204
>PF14145 YrhK: YrhK-like protein
Probab=25.21 E-value=1.8e+02 Score=20.67 Aligned_cols=36 Identities=11% Similarity=0.180 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhhhccCCcchhhhHHHHHHHHHHHH
Q 009344 447 VLISVAYLAMSFIVVGKREKWMAVAVTIVGAVIMAA 482 (537)
Q Consensus 447 ~~~~~af~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 482 (537)
+...+.|..|+.+-+++...-.+...+++|++.++.
T Consensus 13 ~~~~~~FliGSilfl~~~~~~~g~wlFiiGS~~f~i 48 (59)
T PF14145_consen 13 FIGGLLFLIGSILFLPESLYTAGTWLFIIGSILFLI 48 (59)
T ss_pred HHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 344556777888877765444455556666655443
No 205
>PRK15204 undecaprenyl-phosphate galactose phosphotransferase; Provisional
Probab=25.02 E-value=5.4e+02 Score=27.18 Aligned_cols=21 Identities=14% Similarity=0.061 Sum_probs=13.3
Q ss_pred hHhhhhHHHHHHHHHHHHHHH
Q 009344 401 IFFVFDSIALFISLAVVVVQT 421 (537)
Q Consensus 401 ~f~~~~~~a~~~s~~~~~~~~ 421 (537)
+..++|.++|..|+...+.+.
T Consensus 16 ~~~~~d~~~~~~~~~~a~~~~ 36 (476)
T PRK15204 16 FLAISDLIFFNLALWFSLGCV 36 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345558777777776655543
No 206
>PF04304 DUF454: Protein of unknown function (DUF454); InterPro: IPR007401 This is a predicted membrane protein.
Probab=24.77 E-value=2e+02 Score=21.09 Aligned_cols=27 Identities=15% Similarity=0.125 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccC
Q 009344 437 VINKLMWLACVLISVAYLAMSFIVVGK 463 (537)
Q Consensus 437 ~~~~l~~~~~~~~~~af~~~~~~v~~~ 463 (537)
++.+--+.++.+|.+.+....+.+.++
T Consensus 24 i~~k~K~~a~~~m~~~~~~s~~~~~~~ 50 (71)
T PF04304_consen 24 IPRKAKIRALLMMWLSMGISAFFFVPN 50 (71)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 444455566666666666664555553
No 207
>COG1380 Putative effector of murein hydrolase LrgA [General function prediction only]
Probab=24.73 E-value=4.2e+02 Score=22.28 Aligned_cols=12 Identities=33% Similarity=0.473 Sum_probs=6.4
Q ss_pred HHHHHhhcCCCC
Q 009344 363 IAFAAIFQVPGQ 374 (537)
Q Consensus 363 vtf~a~~~~Pgg 374 (537)
++....+.+||.
T Consensus 24 i~~~l~lplPGs 35 (128)
T COG1380 24 IASLLHLPLPGS 35 (128)
T ss_pred HHHHhCCCCChh
Confidence 334455566664
No 208
>PF06024 DUF912: Nucleopolyhedrovirus protein of unknown function (DUF912); InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=24.47 E-value=41 Score=27.01 Aligned_cols=25 Identities=20% Similarity=0.408 Sum_probs=11.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhh
Q 009344 468 MAVAVTIVGAVIMAATLGTMIYWVI 492 (537)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (537)
..+.+.+++++++++++....||++
T Consensus 62 ~iili~lls~v~IlVily~IyYFVI 86 (101)
T PF06024_consen 62 NIILISLLSFVCILVILYAIYYFVI 86 (101)
T ss_pred cchHHHHHHHHHHHHHHhhheEEEE
Confidence 3444444444444555544445544
No 209
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=24.05 E-value=2e+02 Score=31.45 Aligned_cols=74 Identities=14% Similarity=0.284 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC---CcchhhhHHHHHHHHHHHH
Q 009344 406 DSIALFISLAVVVVQTSVVVIESKAKRQLMAVINKLMWLACVLISVAYLAMSFIVVGK---REKWMAVAVTIVGAVIMAA 482 (537)
Q Consensus 406 ~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~af~~~~~~v~~~---~~~~~~~~~~~~~~~~~~~ 482 (537)
-.+..++|++.+++.- ..+. .......++-.|.+.....+++....+..++. ...|+.++.|++...+.-.
T Consensus 243 ~~~gii~Siig~~~v~---~~~~---~~~~~aL~~g~~~s~~l~~v~~~~~~~~~l~~~~~~~~~~~~f~~~~iGlv~g~ 316 (666)
T PRK00733 243 AAVGIIASIIGIFFVR---LGKG---GNPMKALNRGLIVTAVLSIVLTYFATYWLLGDGADGFTWLNLFGAVLIGLVVGA 316 (666)
T ss_pred HHHHHHHHHHHHeeEE---eCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHH
Confidence 4566666665554331 1111 11123334456655444444444444444442 2335556666555544444
Q ss_pred HHH
Q 009344 483 TLG 485 (537)
Q Consensus 483 ~~~ 485 (537)
+++
T Consensus 317 li~ 319 (666)
T PRK00733 317 LIG 319 (666)
T ss_pred HHH
Confidence 443
No 210
>PF02932 Neur_chan_memb: Neurotransmitter-gated ion-channel transmembrane region ion channel family signature gamma-aminobutyric acid (GABA) receptor signature nicotinic acetylcholine receptor signature; InterPro: IPR006029 Neurotransmitter ligand-gated ion channels are transmembrane receptor-ion channel complexes that open transiently upon binding of specific ligands, allowing rapid transmission of signals at chemical synapses [, ]. Five of these ion channel receptor families have been shown to form a sequence-related superfamily: Nicotinic acetylcholine receptor (AchR), an excitatory cation channel in vertebrates and invertebrates; in vertebrate motor endplates it is composed of alpha, beta, gamma and delta/epsilon subunits; in neurons it is composed of alpha and non-alpha (or beta) subunits []. Glycine receptor, an inhibitory chloride ion channel composed of alpha and beta subunits []. Gamma-aminobutyric acid (GABA) receptor, an inhibitory chloride ion channel; at least four types of subunits (alpha, beta, gamma and delta) are known []. Serotonin 5HT3 receptor, of which there are seven major types (5HT3-5HT7) []. Glutamate receptor, an excitatory cation channel of which at least three types have been described (kainate, N-methyl-D-aspartate (NMDA) and quisqualate) []. These receptors possess a pentameric structure (made up of varying subunits), surrounding a central pore. All known sequences of subunits from neurotransmitter-gated ion-channels are structurally related. They are composed of a large extracellular glycosylated N-terminal ligand-binding domain, followed by three hydrophobic transmembrane regions which form the ionic channel, followed by an intracellular region of variable length. A fourth hydrophobic region is found at the C-terminal of the sequence [, ]. This domain represents four transmembrane helices of a variety of neurotransmitter-gated ion-channels.; GO: 0006811 ion transport, 0016020 membrane; PDB: 1DXZ_A 3MRA_A 1EQ8_C 1OED_C 2PR9_P 1A11_A 1CEK_A 2BG9_E 2KSR_A 2K59_B ....
Probab=23.92 E-value=3.2e+02 Score=24.13 Aligned_cols=11 Identities=18% Similarity=0.111 Sum_probs=4.5
Q ss_pred HHHHHhhhccC
Q 009344 453 YLAMSFIVVGK 463 (537)
Q Consensus 453 f~~~~~~v~~~ 463 (537)
|..++.-.+|.
T Consensus 40 ~~~~~~~~lP~ 50 (237)
T PF02932_consen 40 FLLMVAENLPP 50 (237)
T ss_dssp HHHHHHHHHHH
T ss_pred HHhhhhhhhcc
Confidence 33344344443
No 211
>KOG2049 consensus Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily) [Translation, ribosomal structure and biogenesis]
Probab=23.76 E-value=4.2e+02 Score=28.35 Aligned_cols=19 Identities=21% Similarity=0.377 Sum_probs=8.4
Q ss_pred HHHHhCCCHHHHHHHHHhC
Q 009344 203 HMAVKGQNIEVVQELIKAE 221 (537)
Q Consensus 203 h~A~~~g~~~~v~~Ll~~~ 221 (537)
+++.++-.-.+|+.+|+..
T Consensus 441 eLS~qKfgS~vVEk~L~~~ 459 (536)
T KOG2049|consen 441 ELSFQKFGSHVVEKLLKVR 459 (536)
T ss_pred HHHHHhhccHHHHHHHhcC
Confidence 3444433344455555443
No 212
>PRK10755 sensor protein BasS/PmrB; Provisional
Probab=23.66 E-value=2.6e+02 Score=27.72 Aligned_cols=8 Identities=13% Similarity=0.434 Sum_probs=3.1
Q ss_pred HHHHHhhh
Q 009344 486 TMIYWVIR 493 (537)
Q Consensus 486 ~~~~~~~~ 493 (537)
.+.|+..+
T Consensus 76 ~~~~~~~~ 83 (356)
T PRK10755 76 LICFQAVR 83 (356)
T ss_pred HHHHHHHH
Confidence 33444333
No 213
>PF08113 CoxIIa: Cytochrome c oxidase subunit IIa family; InterPro: IPR012538 This family consists of the cytochrome c oxidase subunit IIa family. The bax-type cytochrome c oxidase from Thermus thermophilus is known as a two subunit enzyme. From its crystal structure, it was discovered that an additional transmembrane helix, subunit IIa, spans the membrane. This subunit consists of 34 residues forming one helix across the membrane. The presence of this subunit seems to be important for the function of cytochrome c oxidases [].; PDB: 2QPD_C 3QJR_C 3EH5_C 3BVD_C 3S39_C 3QJU_C 3QJS_C 4EV3_C 3QJT_C 4FA7_C ....
Probab=23.47 E-value=1.9e+02 Score=17.85 Aligned_cols=18 Identities=28% Similarity=0.337 Sum_probs=8.0
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 009344 470 VAVTIVGAVIMAATLGTM 487 (537)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ 487 (537)
.+|.+++..+++..++.+
T Consensus 10 ~vv~iLt~~ILvFWfgvf 27 (34)
T PF08113_consen 10 GVVMILTAFILVFWFGVF 27 (34)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHH
Confidence 344444444444444433
No 214
>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains. They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].
Probab=23.06 E-value=60 Score=29.73 Aligned_cols=25 Identities=8% Similarity=0.297 Sum_probs=12.6
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHH
Q 009344 466 KWMAVAVTIVGAVIMAATLGTMIYW 490 (537)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (537)
.++.|+|.++++++.+++++++.++
T Consensus 35 d~~~I~iaiVAG~~tVILVI~i~v~ 59 (221)
T PF08374_consen 35 DYVKIMIAIVAGIMTVILVIFIVVL 59 (221)
T ss_pred cceeeeeeeecchhhhHHHHHHHHH
Confidence 3455666666555444444444333
No 215
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=22.95 E-value=1.5e+02 Score=29.01 Aligned_cols=19 Identities=21% Similarity=0.494 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHhhhhccc
Q 009344 479 IMAATLGTMIYWVIRHRIE 497 (537)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~ 497 (537)
++.+++.+.+|+++|+|-+
T Consensus 266 liIVLIMvIIYLILRYRRK 284 (299)
T PF02009_consen 266 LIIVLIMVIIYLILRYRRK 284 (299)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334445566777776643
No 216
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional
Probab=22.77 E-value=7.5e+02 Score=24.46 Aligned_cols=58 Identities=17% Similarity=0.160 Sum_probs=33.4
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhHHHHHHHHhHhhhhhhhhhhhhHHHHHHHHHHHHhh
Q 009344 312 DIKHEVHYQLEHTRQTRRRVHGIAKRLHKMHAEGLNNAINSTTVVAVLIATIAFAAIF 369 (537)
Q Consensus 312 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~k~~~~~l~~~~~~~~~va~liatvtf~a~~ 369 (537)
+..++.....++...-++.+....+..........++..+.+++++++.+=.|+-||+
T Consensus 218 ~~~~Di~~l~~~~~~~~~~~~~l~d~~~~~i~~~~N~~mk~lTv~s~if~pptliagi 275 (316)
T PRK11085 218 EILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASS 275 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333343334444444444444444444444555666677788888888888887755
No 217
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.72 E-value=2.2e+02 Score=32.03 Aligned_cols=98 Identities=17% Similarity=0.075 Sum_probs=52.8
Q ss_pred HHHHHHcCCHHHHHHHHHcCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCChHHHHHHHcCCHH
Q 009344 65 LYVAAEYGHVDLVAEMIKCYDLADAGIKARNGFDAFHIAAKEGHLEVLKVLLAVYPELAMTVDLTNTTALHTAAMQGHVE 144 (537)
Q Consensus 65 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~ 144 (537)
+-+|....+.+-|--|++.. +.-|+.++-+--+.|..|++-..+ .+..|-+-+|...|+.+
T Consensus 600 FKlALi~k~ydeVl~lI~ns--------~LvGqaiIaYLqKkgypeiAL~FV-----------kD~~tRF~LaLe~gnle 660 (1202)
T KOG0292|consen 600 FKLALLNKKYDEVLHLIKNS--------NLVGQAIIAYLQKKGYPEIALHFV-----------KDERTRFELALECGNLE 660 (1202)
T ss_pred HHHHHHhhhhHHHHHHHHhc--------CcccHHHHHHHHhcCCcceeeeee-----------cCcchheeeehhcCCHH
Confidence 44566666666555566543 233555555555555554433222 23345566677777777
Q ss_pred HHHHHHHcCCCcccccCCCCCc-HHHHHHHcCcHHHHHHHHhcC
Q 009344 145 VLNFLIEAESSLITISRSNGKT-ALHSAARNGRLEVLKTLLAAD 187 (537)
Q Consensus 145 iv~~Ll~~~~~~~~~~~~~g~t-pLh~A~~~g~~~~v~~Ll~~~ 187 (537)
++-..-....+. +-+. .-..|...|+.++++...++-
T Consensus 661 ~ale~akkldd~------d~w~rLge~Al~qgn~~IaEm~yQ~~ 698 (1202)
T KOG0292|consen 661 VALEAAKKLDDK------DVWERLGEEALRQGNHQIAEMCYQRT 698 (1202)
T ss_pred HHHHHHHhcCcH------HHHHHHHHHHHHhcchHHHHHHHHHh
Confidence 666555443331 1112 223456677888887777653
No 218
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=22.51 E-value=5.1e+02 Score=25.39 Aligned_cols=23 Identities=13% Similarity=0.363 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 009344 437 VINKLMWLACVLISVAYLAMSFI 459 (537)
Q Consensus 437 ~~~~l~~~~~~~~~~af~~~~~~ 459 (537)
....|..++++++...|+||.|=
T Consensus 257 ~mk~LTvvt~IflP~t~IaGiyG 279 (318)
T TIGR00383 257 IMKILTVVSTIFIPLTFIAGIYG 279 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34456678889999999999984
No 219
>PF11674 DUF3270: Protein of unknown function (DUF3270); InterPro: IPR021688 This family of proteins with unknown function appears to be restricted to Streptococcus.
Probab=22.43 E-value=3.1e+02 Score=21.53 Aligned_cols=12 Identities=17% Similarity=0.182 Sum_probs=5.3
Q ss_pred HhhhhHHHHHHH
Q 009344 402 FFVFDSIALFIS 413 (537)
Q Consensus 402 f~~~~~~a~~~s 413 (537)
++..|...||++
T Consensus 40 lFF~nIA~FcI~ 51 (90)
T PF11674_consen 40 LFFANIAFFCIF 51 (90)
T ss_pred HHHHHHHHHHHH
Confidence 444454444443
No 220
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=22.32 E-value=1.4e+02 Score=28.69 Aligned_cols=17 Identities=24% Similarity=0.434 Sum_probs=9.5
Q ss_pred hhhhhHHHHHHHHHHHH
Q 009344 351 NSTTVVAVLIATIAFAA 367 (537)
Q Consensus 351 ~~~~~va~liatvtf~a 367 (537)
-+|.|.+++...+..+|
T Consensus 177 ~~CsvGSA~LT~IGLaA 193 (295)
T TIGR01478 177 GTCALSSALLGNIGIAA 193 (295)
T ss_pred EeeccHHHHHHHHHHHH
Confidence 45566666665555533
No 221
>COG3125 CyoD Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]
Probab=22.14 E-value=4.4e+02 Score=21.53 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 009344 407 SIALFISLAVVVVQTSVV 424 (537)
Q Consensus 407 ~~a~~~s~~~~~~~~~~~ 424 (537)
.++|..|++..++-++..
T Consensus 21 ~iGFvLsIiLT~ipF~~v 38 (111)
T COG3125 21 LIGFVLSIILTLIPFWVV 38 (111)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 567777776555544433
No 222
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=22.10 E-value=4.7e+02 Score=28.15 Aligned_cols=16 Identities=19% Similarity=0.478 Sum_probs=7.9
Q ss_pred hhhhHHHHHHHHHHHH
Q 009344 403 FVFDSIALFISLAVVV 418 (537)
Q Consensus 403 ~~~~~~a~~~s~~~~~ 418 (537)
++.|.+....|+...+
T Consensus 3 ~~~D~~~v~~s~~~~~ 18 (588)
T COG1086 3 ILTDLLLVLVALALAL 18 (588)
T ss_pred ehHHHHHHHHHHHHHH
Confidence 4455555555554433
No 223
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=21.72 E-value=31 Score=32.89 Aligned_cols=8 Identities=13% Similarity=0.044 Sum_probs=0.0
Q ss_pred cchhHhhh
Q 009344 398 AFIIFFVF 405 (537)
Q Consensus 398 ~f~~f~~~ 405 (537)
.-.+|+.+
T Consensus 20 ~~~a~l~~ 27 (381)
T PF05297_consen 20 QPHASLLF 27 (381)
T ss_dssp --------
T ss_pred CcchhHHH
Confidence 34555443
No 224
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=21.70 E-value=7.1e+02 Score=23.77 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHhhcCCCCC
Q 009344 355 VVAVLIATIAFAAIFQVPGQF 375 (537)
Q Consensus 355 ~va~liatvtf~a~~~~Pgg~ 375 (537)
.+|.++|.+.|..-|-|==.|
T Consensus 2 ~~a~~va~~~fGs~~vPvK~~ 22 (254)
T PF07857_consen 2 YIACIVAVLFFGSNFVPVKKF 22 (254)
T ss_pred chhHHHHHHHhcccceeeEec
Confidence 468899999998877664433
No 225
>PF09928 DUF2160: Predicted small integral membrane protein (DUF2160); InterPro: IPR018678 The members of this family of hypothetical prokaryotic proteins have no known function. It is thought that they are transmembrane proteins, but their function has not been inferred yet.
Probab=21.41 E-value=1.3e+02 Score=23.33 Aligned_cols=27 Identities=19% Similarity=0.570 Sum_probs=16.0
Q ss_pred HHHHHHHHHhhhccCCcchhhhHHHHH
Q 009344 449 ISVAYLAMSFIVVGKREKWMAVAVTIV 475 (537)
Q Consensus 449 ~~~af~~~~~~v~~~~~~~~~~~~~~~ 475 (537)
+..||.--.++-+...+.|.+..++++
T Consensus 53 L~sA~I~L~Wlgl~~~~lW~a~~ls~~ 79 (88)
T PF09928_consen 53 LGSAFIHLAWLGLVGPSLWIALALSLV 79 (88)
T ss_pred HHHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 344566666655555666777666554
No 226
>PF10321 7TM_GPCR_Srt: Serpentine type 7TM GPCR chemoreceptor Srt; InterPro: IPR019425 Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type []. Srt is a member of the Srg superfamily of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].
Probab=21.06 E-value=5.3e+02 Score=25.49 Aligned_cols=27 Identities=19% Similarity=0.189 Sum_probs=20.1
Q ss_pred hhhhHHHHHHHHHHHHhhcCCCCCCCC
Q 009344 352 STTVVAVLIATIAFAAIFQVPGQFVDK 378 (537)
Q Consensus 352 ~~~~va~liatvtf~a~~~~Pgg~~~~ 378 (537)
...+....+.-..|.+.||+|--|+++
T Consensus 150 ~~~~l~~~~iY~~y~~~fT~pv~Fns~ 176 (313)
T PF10321_consen 150 TYIVLFLPIIYGFYFSFFTPPVLFNSE 176 (313)
T ss_pred EEeeehhHHHHHHHHHHHcCcccCCCC
Confidence 345556667777888899999988764
No 227
>PF11241 DUF3043: Protein of unknown function (DUF3043); InterPro: IPR021403 Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.
Probab=21.01 E-value=3.6e+02 Score=23.98 Aligned_cols=8 Identities=38% Similarity=0.571 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 009344 444 LACVLISV 451 (537)
Q Consensus 444 ~~~~~~~~ 451 (537)
++++.+++
T Consensus 84 ~alv~lv~ 91 (170)
T PF11241_consen 84 VALVLLVL 91 (170)
T ss_pred HHHHHHHH
Confidence 33333333
No 228
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=20.95 E-value=6.6e+02 Score=23.08 Aligned_cols=8 Identities=0% Similarity=-0.405 Sum_probs=3.1
Q ss_pred HHHHhhcC
Q 009344 364 AFAAIFQV 371 (537)
Q Consensus 364 tf~a~~~~ 371 (537)
..--++.+
T Consensus 118 ~ee~g~~~ 125 (213)
T PF01988_consen 118 REELGLSP 125 (213)
T ss_pred hhhccCCc
Confidence 33333433
No 229
>KOG1226 consensus Integrin beta subunit (N-terminal portion of extracellular region) [Signal transduction mechanisms; Extracellular structures]
Probab=20.73 E-value=1e+02 Score=33.86 Aligned_cols=45 Identities=9% Similarity=0.210 Sum_probs=32.5
Q ss_pred cCCcchhhhHHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhhc
Q 009344 462 GKREKWMAVAVTIVGAVIMAATLGTMIYWVIRHRIEDSNMRSIRK 506 (537)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (537)
|+...|++|+..++++++++.++++++|.++-..-.+....++.+
T Consensus 708 p~~~~~~~i~lgvv~~ivligl~llliwkll~~~~DrrE~akFe~ 752 (783)
T KOG1226|consen 708 PPGPNILAIVLGVVAGIVLIGLALLLIWKLLTTIHDRREFAKFEK 752 (783)
T ss_pred CCCCcEeeehHHHHHHHHHHHHHHHHHHHHhheecccHHhhhhhH
Confidence 455678899999999999999999888887665444444444433
No 230
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=20.51 E-value=4.4e+02 Score=20.89 Aligned_cols=46 Identities=22% Similarity=0.452 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHH-hhhccCC--cchhhhHHHHHHHHHHHHHHHHHHH
Q 009344 444 LACVLISVAYLAMS-FIVVGKR--EKWMAVAVTIVGAVIMAATLGTMIY 489 (537)
Q Consensus 444 ~~~~~~~~af~~~~-~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (537)
+.++.+.+||.+.- |+.+|.. .+-.++...++|..+++-....++|
T Consensus 17 lG~~LLv~a~Lsin~~l~LP~~l~~~~aai~MIf~Gi~lMlPAav~ivW 65 (96)
T PF07214_consen 17 LGMILLVLAYLSINDYLSLPAPLSTPTAAIAMIFVGIGLMLPAAVNIVW 65 (96)
T ss_pred HHHHHHHHHHHHHcccccCcccccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556665533 4444421 1223333344444444433333333
No 231
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=20.36 E-value=1e+02 Score=28.75 Aligned_cols=17 Identities=12% Similarity=0.466 Sum_probs=12.2
Q ss_pred cchhhhHHHHHHHHHHH
Q 009344 465 EKWMAVAVTIVGAVIMA 481 (537)
Q Consensus 465 ~~~~~~~~~~~~~~~~~ 481 (537)
-+|+..+++++|.++++
T Consensus 222 q~wLwwi~~vlG~ll~l 238 (262)
T KOG4812|consen 222 QYWLWWIFLVLGLLLFL 238 (262)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 37998888888765443
Done!