Query         009347
Match_columns 537
No_of_seqs    178 out of 1944
Neff          11.1
Searched_HMMs 46136
Date          Thu Mar 28 12:00:38 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009347.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009347hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 6.2E-84 1.3E-88  624.5  47.2  460   38-531    25-488 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 4.6E-79   1E-83  615.5  49.0  480   35-536    53-539 (543)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 2.6E-79 5.6E-84  582.2  41.6  477   16-531     9-499 (499)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 4.3E-77 9.3E-82  599.6  49.6  479   36-537    31-515 (517)
  5 PLN00110 flavonoid 3',5'-hydro 100.0 3.1E-77 6.6E-82  596.7  47.4  482   28-537    20-503 (504)
  6 PLN03112 cytochrome P450 famil 100.0 3.4E-76 7.3E-81  594.5  49.7  503   12-537     6-514 (514)
  7 PLN03234 cytochrome P450 83B1; 100.0   6E-76 1.3E-80  591.0  47.1  467   37-530    26-498 (499)
  8 PLN02183 ferulate 5-hydroxylas 100.0 5.7E-76 1.2E-80  591.3  46.6  466   37-530    34-511 (516)
  9 PTZ00404 cytochrome P450; Prov 100.0 3.2E-76 6.9E-81  590.3  43.9  479   12-530     3-482 (482)
 10 PLN00168 Cytochrome P450; Prov 100.0 1.2E-74 2.6E-79  582.2  50.5  486   23-532    19-518 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0 8.3E-75 1.8E-79  583.3  48.0  470   36-531    27-502 (503)
 12 PLN02966 cytochrome P450 83A1  100.0 5.7E-74 1.2E-78  575.4  46.4  464   37-529    27-498 (502)
 13 PLN02655 ent-kaurene oxidase   100.0 1.9E-73 4.1E-78  566.2  46.0  461   41-533     1-466 (466)
 14 PLN03018 homomethionine N-hydr 100.0 4.4E-72 9.5E-77  560.2  51.8  475   39-536    40-529 (534)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 1.6E-73 3.4E-78  528.9  37.9  462   37-531    48-518 (519)
 16 PLN02290 cytokinin trans-hydro 100.0 1.2E-73 2.7E-78  576.1  40.4  455   36-532    39-516 (516)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0   2E-73 4.3E-78  564.0  37.2  456   37-532    33-497 (497)
 18 PLN02500 cytochrome P450 90B1  100.0   2E-72 4.4E-77  563.0  43.9  440   35-529    34-488 (490)
 19 PLN03195 fatty acid omega-hydr 100.0 1.6E-70 3.5E-75  552.9  42.9  457   40-531    31-516 (516)
 20 PLN02169 fatty acid (omega-1)- 100.0 3.3E-70 7.1E-75  545.0  42.8  455   38-530    30-499 (500)
 21 PLN02738 carotene beta-ring hy 100.0 9.2E-70   2E-74  548.8  44.5  451   51-534   142-598 (633)
 22 PLN02774 brassinosteroid-6-oxi 100.0 2.2E-70 4.8E-75  543.8  39.0  430   36-529    28-462 (463)
 23 PF00067 p450:  Cytochrome P450 100.0 2.9E-71 6.3E-76  557.4  31.8  455   41-527     1-463 (463)
 24 PLN02196 abscisic acid 8'-hydr 100.0 2.9E-69 6.2E-74  535.3  41.2  429   34-530    30-462 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 4.2E-69 9.1E-74  533.5  39.6  438   36-532     4-451 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0   7E-68 1.5E-72  533.0  44.6  441   34-532    37-489 (490)
 27 KOG0684 Cytochrome P450 [Secon 100.0 4.2E-68 9.2E-73  479.9  35.4  443   39-531    31-485 (486)
 28 PLN02987 Cytochrome P450, fami 100.0 5.4E-67 1.2E-71  516.7  43.5  456   15-533     8-471 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 8.9E-67 1.9E-71  520.6  42.4  450   46-532    18-483 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.2E-65 2.6E-70  511.2  42.3  440   48-531    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 6.4E-57 1.4E-61  441.2  31.6  408   37-504    15-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.3E-53 4.9E-58  411.7  33.6  381   63-530    25-410 (411)
 33 PF05952 ComX:  Bacillus compet  50.9      17 0.00037   23.8   2.4   19  346-364     4-22  (57)
 34 PF15050 SCIMP:  SCIMP protein   47.2      42  0.0009   25.7   4.2   18   39-56     68-85  (133)
 35 KOG3653 Transforming growth fa  43.6      96  0.0021   30.6   7.1   63   40-109   196-259 (534)
 36 PF12554 MOZART1:  Mitotic-spin  41.0      67  0.0015   20.3   3.8   42  324-365     6-47  (48)
 37 PF15330 SIT:  SHP2-interacting  36.0      62  0.0013   24.7   3.8   13   46-58     44-56  (107)
 38 PF12508 DUF3714:  Protein of u  34.7      27 0.00059   30.1   1.9   42  384-427    53-94  (200)
 39 PF09201 SRX:  SRX;  InterPro:   33.2      41  0.0009   26.6   2.5   24  474-497    18-41  (148)
 40 PF01102 Glycophorin_A:  Glycop  31.9      59  0.0013   25.4   3.2    7   24-30     84-90  (122)
 41 PF15300 INT_SG_DDX_CT_C:  INTS  31.7      50  0.0011   22.4   2.4   15  382-396    39-53  (65)
 42 KOG0114 Predicted RNA-binding   31.3 2.2E+02  0.0047   21.5   5.7   40   62-101    31-76  (124)
 43 PF14129 DUF4296:  Domain of un  28.9 2.3E+02  0.0049   20.5   6.1   48  322-369    31-78  (87)
 44 PF14550 Peptidase_U35_2:  Puta  28.5      43 0.00094   26.2   1.9   21  407-427    72-92  (122)
 45 PRK06789 flagellar motor switc  28.3      54  0.0012   23.0   2.1   41  389-429    21-63  (74)
 46 PF14004 DUF4227:  Protein of u  27.3 1.4E+02   0.003   20.8   3.9   33   12-44     11-43  (71)
 47 PF13625 Helicase_C_3:  Helicas  25.5 1.9E+02   0.004   22.9   5.2   39   62-102    76-114 (129)
 48 COG3190 FliO Flagellar biogene  25.1 3.6E+02  0.0078   21.6   6.4   26    8-33     24-49  (137)
 49 KOG3506 40S ribosomal protein   23.9      36 0.00078   21.9   0.6   11  467-477    12-22  (56)
 50 TIGR00847 ccoS cytochrome oxid  22.9 1.7E+02  0.0038   18.8   3.5   17   15-31     12-28  (51)
 51 COG0851 MinE Septum formation   22.8 1.5E+02  0.0033   21.5   3.6   18  354-371    35-52  (88)
 52 PF05393 Hum_adeno_E3A:  Human   22.6 2.2E+02  0.0048   20.6   4.3    6   47-52     66-71  (94)
 53 PF13893 RRM_5:  RNA recognitio  21.5 2.3E+02  0.0049   18.0   4.2   34   67-100     2-39  (56)
 54 PF08285 DPM3:  Dolichol-phosph  21.4 1.3E+02  0.0028   22.1   3.2   29  342-370    54-82  (91)
 55 PHA03162 hypothetical protein;  21.3      97  0.0021   24.3   2.6   24  470-493     2-25  (135)
 56 PLN03134 glycine-rich RNA-bind  20.3   3E+02  0.0066   22.3   5.5   49   50-101    38-95  (144)
 57 PF07849 DUF1641:  Protein of u  20.2 1.3E+02  0.0028   18.3   2.5   19  345-363    13-31  (42)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.2e-84  Score=624.49  Aligned_cols=460  Identities=40%  Similarity=0.708  Sum_probs=405.6

Q ss_pred             CCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCc-cchhh
Q 009347           38 KRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPK-ALVAE  116 (537)
Q Consensus        38 ~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~-~~~~~  116 (537)
                      .+.|||| +++|++||+..+....+|+.+.+|.++|||+|.+++|..++|||+|+++++|++++++..|++|+. .....
T Consensus        25 ~~lPPGP-~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   25 RNLPPGP-PPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCcCC-CCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            6799999 899999999999776789999999999999999999999999999999999999999999999997 23446


Q ss_pred             hhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhH
Q 009347          117 ILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNK  196 (537)
Q Consensus       117 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~  196 (537)
                      ...++..+++++.+|+.||.+||+.....++...+++......++++.+++.+.+.        .    .+ + +||+..
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~--------~----~~-~-~vdl~~  169 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKS--------K----KG-E-PVDLSE  169 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhc--------C----CC-c-eeeHHH
Confidence            67777788899999999999999999889999999999888899999998888752        0    33 4 899999


Q ss_pred             HHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccc-cccccc-CCCcHHHHHHHHHHHHH
Q 009347          197 WFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLP-FLRWFD-IGGDERAMKKNARELDV  274 (537)
Q Consensus       197 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~  274 (537)
                      .+...+.++|++++||.++...    +.+...++.+.+.+.....+.+.+.+++| ++.+++ ..+..++.+....+++.
T Consensus       170 ~l~~~~~nvI~~~~fG~rf~~~----~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~  245 (489)
T KOG0156|consen  170 LLDLLVGNVICRMLFGRRFEEE----DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDE  245 (489)
T ss_pred             HHHHHHHHHHHHHHhCCccccC----CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHH
Confidence            9999999999999999999322    11244568899999999999998999999 677774 23456667777777999


Q ss_pred             HHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHh
Q 009347          275 LAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLN  353 (537)
Q Consensus       275 ~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~  353 (537)
                      ++++.|++++++. . .   ++. .|++|.|++...+++..    .+ ++++.+.++++++||+|||++++.|++.+|++
T Consensus       246 ~~~~~i~eh~~~~-~-~---~~~-~D~vD~lL~~~~~~~~~----~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~  315 (489)
T KOG0156|consen  246 FLERIIDEHREKI-G-D---EEG-RDFVDALLKLMKEEKAE----GLTDDHLKALILDLFLAGTDTTATTLEWAMAELLN  315 (489)
T ss_pred             HHHHHHHHHHhhh-c-c---CCC-CcHHHHHHHhhcccccC----CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHh
Confidence            9999999998876 2 1   122 99999999987765221    16 99999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEecccccc
Q 009347          354 HRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIH  433 (537)
Q Consensus       354 ~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~  433 (537)
                      ||++|+|+++||++++|.++.++.+|+.+||||+|||+|++|++|++|+..+|.+.+|+.++||.|||||.|.++.|++|
T Consensus       316 ~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~  395 (489)
T KOG0156|consen  316 NPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIH  395 (489)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhh
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCccccc
Q 009347          434 RDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGM  513 (537)
Q Consensus       434 ~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  513 (537)
                      |||++|+||++|+||||++++   +..+....++|||.|+|.|||..+|++|+.++++.||++||++++.+ .+++.+. 
T Consensus       396 rDp~vw~dP~eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-  470 (489)
T KOG0156|consen  396 RDPKVWEDPEEFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-  470 (489)
T ss_pred             cCCccCCCccccChhhhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-
Confidence            999999999999999999874   12236688999999999999999999999999999999999999887 6677666 


Q ss_pred             ceeeeecCceEEEEeccc
Q 009347          514 SLTLVKTTPVKVLITPRL  531 (537)
Q Consensus       514 ~~~~~~~~~~~~~~~~r~  531 (537)
                      +.++..+.|+.+...+|.
T Consensus       471 ~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  471 GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             ccceecCCcceeeeecCC
Confidence            467777889999888885


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.6e-79  Score=615.52  Aligned_cols=480  Identities=28%  Similarity=0.505  Sum_probs=378.8

Q ss_pred             cCCCCCCCCCCCCCcceeeccccCCC-cHhHHHHHHHHhhC-CeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCcc
Q 009347           35 NKKKRGPPEAGGAWPVIGHLHLLGRF-PLHRVLGDMADKYG-PIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKA  112 (537)
Q Consensus        35 ~~~~~~~Pgp~~~~p~iG~~~~~~~~-~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~  112 (537)
                      +++.+.|||| +++|++||+..+..+ ..+..+.++.++|| +++++++|+.++++|+||+++++|+.+++..|.+++..
T Consensus        53 ~r~~~lPPGP-~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~  131 (543)
T PLN02971         53 KKLHPLPPGP-TGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLT  131 (543)
T ss_pred             CCCCCCCcCC-CCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcc
Confidence            3445789999 789999998877433 24678999999999 89999999999999999999999999988888888764


Q ss_pred             chhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCcccccc
Q 009347          113 LVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLV  192 (537)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~v  192 (537)
                      .....++.+..+++++.+|+.|+++|++++.+.+++..++.+.+.++++++.+++.+.+.        ..   .+ + ++
T Consensus       132 ~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--------~~---~~-~-~v  198 (543)
T PLN02971        132 YAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNM--------VK---NS-E-PV  198 (543)
T ss_pred             cchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh--------cc---CC-C-ce
Confidence            444444544344578889999999999997677777777888888888888888877653        11   23 4 79


Q ss_pred             chhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccc---cccccccccccccccCCCcHHHHHHHH
Q 009347          193 EMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSG---KFVVSDSLPFLRWFDIGGDERAMKKNA  269 (537)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~  269 (537)
                      |+.+.+..++++++++++||.++.......+++...++.+.++.++....   ...+.+.+|++++++.....+..++..
T Consensus       199 d~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~  278 (543)
T PLN02971        199 DLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESS  278 (543)
T ss_pred             ehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHH
Confidence            99999999999999999999986211100000011123333333332211   122345567666553323344555566


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHH
Q 009347          270 RELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWIL  348 (537)
Q Consensus       270 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l  348 (537)
                      +.+.+++.+.++++++..+.+.   .....|+++.|++...++    ....+ ++++.+++.++++||+|||+++++|++
T Consensus       279 ~~~~~~~~~~i~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~----~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l  351 (543)
T PLN02971        279 AIMDKYHDPIIDERIKMWREGK---RTQIEDFLDIFISIKDEA----GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAM  351 (543)
T ss_pred             HHHHHHHHHHHHHHHHHHhccC---CCCCcCHHHHHHhhhccc----CCCCCCHHHHHHhHHHHheeccchHHHHHHHHH
Confidence            7788888999988876443211   123479999999864322    11135 899999999999999999999999999


Q ss_pred             HHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEec
Q 009347          349 SLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVN  428 (537)
Q Consensus       349 ~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~  428 (537)
                      ++|++||++|+|+++||++++++++.++++++++|||++|||+|+||++|++|...+|.+.+|++++||.||||+.|+++
T Consensus       352 ~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~  431 (543)
T PLN02971        352 AEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLS  431 (543)
T ss_pred             HHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEEC
Confidence            99999999999999999999988788999999999999999999999999999877899999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCC-CCC
Q 009347          429 VWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD-EPV  507 (537)
Q Consensus       429 ~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~-~~~  507 (537)
                      .|++||||++|+||++|+||||++++.+......+..|+|||+|+|.|+|++||++|+++++++||++|++++.++ .++
T Consensus       432 ~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~  511 (543)
T PLN02971        432 RYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRV  511 (543)
T ss_pred             cHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCc
Confidence            9999999999999999999999975422111224568999999999999999999999999999999999998765 356


Q ss_pred             CcccccceeeeecCceEEEEeccccccCC
Q 009347          508 DMSEGMSLTLVKTTPVKVLITPRLSASLY  536 (537)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  536 (537)
                      ++.+..+ ++..++++.+.+++|-+.++|
T Consensus       512 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  539 (543)
T PLN02971        512 ELMESSH-DMFLSKPLVMVGELRLSEDLY  539 (543)
T ss_pred             chhhhcC-cccccccceeeeeecCCcccc
Confidence            6666655 665677999999999888887


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-79  Score=582.20  Aligned_cols=477  Identities=26%  Similarity=0.369  Sum_probs=366.2

Q ss_pred             HHHHHHHHHHHHhcccccccCCCCCCCCCCCCCcceeeccccCCCc-HhHHHHHHHHhhCCeeEEecCCeeEEEecCHHH
Q 009347           16 TLIIFLYTLLLFVSRNYASNKKKRGPPEAGGAWPVIGHLHLLGRFP-LHRVLGDMADKYGPIFTIRMGVHRALVVSNWEM   94 (537)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~~p~iG~~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~   94 (537)
                      +++++++++++|+.+.+..+++ +++|+| +++|++||+..+.... ......+...+|||++.++.+.++.++|+||+.
T Consensus         9 l~~~l~~l~y~~~~~~~~yw~r-rGi~~~-~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~el   86 (499)
T KOG0158|consen    9 LLILLLVLLYLWLRWTYSYWRR-RGIPGP-KPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPEL   86 (499)
T ss_pred             HHHHHHHHHHHHHHhhhhhhcc-CCCCCC-CCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHH
Confidence            3333334555555566555544 499999 6789999998884321 234444444444999999999999999999999


Q ss_pred             HHHHHHhCCccccCCC--ccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009347           95 AKECLTTHDRVFASRP--KALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDF  172 (537)
Q Consensus        95 ~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~  172 (537)
                      +++|+.++.+.|.++.  ......  +......++..+|++||+.|..++ |.|+..+++++.+++++.++++++.+.+.
T Consensus        87 ik~I~ik~F~~F~~r~~~~~~d~~--~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~  163 (499)
T KOG0158|consen   87 IKEILIKDFDNFYNRKRPIYGDPE--DPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRK  163 (499)
T ss_pred             HHHHHHHhCccCcCCCCCCcCCCC--CcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999988898843  221111  111124457888999999999999 99999999999999999999999999986


Q ss_pred             HhhhcCCCCCCccCccccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhc-cccc----ccc
Q 009347          173 WERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAF-SGKF----VVS  247 (537)
Q Consensus       173 ~~~~~~~~~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~  247 (537)
                              ..   .+ . .+++.+.+.++|.|+|++++||.+. ++.  .+  ....|...-...+.. ....    ...
T Consensus       164 --------~~---~~-~-~~~~~dl~~~yT~DVI~~~AfG~~~-~s~--~d--~~~~F~~~~~~~~~~~~~~~~l~~~~~  225 (499)
T KOG0158|consen  164 --------SE---GG-Q-EGEIKDLCARYTTDVIGSCAFGLDA-NSL--RD--PKAEFRRMGRRAFFLSRGLFPLKFMLI  225 (499)
T ss_pred             --------hc---cc-C-CccHHHHHHHHHHHHHhHhhcccch-hhh--cC--chHHHHHhhHHHHHHhhccchHhHhHH
Confidence                    21   22 3 6888888999999999999999998 443  23  233444333333222 1111    112


Q ss_pred             ccccccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCC-Cc-hhhH
Q 009347          248 DSLPFLRWFDIGGDERAMKKNARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGD-DA-DTIN  325 (537)
Q Consensus       248 ~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~-~~-~~~i  325 (537)
                      ..+|.+....  ..........+.+.+.+.+.++.|.+  .      ...+.|+++.|++...++..+.... .+ .+++
T Consensus       226 ~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~--~------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei  295 (499)
T KOG0158|consen  226 FLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREK--E------NIERNDFIDLLLDARASDFAKSKSHKALTDDEI  295 (499)
T ss_pred             HHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHh--c------CCCCchHHHHHHHhhcccccccccccccCHHHH
Confidence            2334332220  00111233444555555555555521  1      1478999999999886421211111 36 9999


Q ss_pred             HHHHHHHHHhhhhchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCc
Q 009347          326 KATCLALILAASDTSKITLTWILSLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAP  405 (537)
Q Consensus       326 ~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~  405 (537)
                      +++|..|++||.||||++++.++|+||+||++|+|||+||++++.+...+|+|.+.+|+||++||+||||+||+++.. -
T Consensus       296 ~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~  374 (499)
T KOG0158|consen  296 AAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-N  374 (499)
T ss_pred             HHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-c
Confidence            999999999999999999999999999999999999999999987755599999999999999999999999999995 8


Q ss_pred             ccccCCCccc-ceeeCCCcEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHH
Q 009347          406 HASTEDCTVN-DYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIP  484 (537)
Q Consensus       406 r~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~  484 (537)
                      |.+++|++++ ++.||||+.|.++++++||||++||||++|+||||.+++.+   ..++..|+|||.|||.|+|++||++
T Consensus       375 R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~m  451 (499)
T KOG0158|consen  375 RECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALM  451 (499)
T ss_pred             ceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHH
Confidence            9999999999 99999999999999999999999999999999999977632   3478899999999999999999999


Q ss_pred             HHHHHHHHHHhhcceeCCCCCCCCccccc---ceeeeecCceEEEEeccc
Q 009347          485 VTHLTLATLLHGFDFETPLDEPVDMSEGM---SLTLVKTTPVKVLITPRL  531 (537)
Q Consensus       485 e~~~~l~~ll~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~  531 (537)
                      |+|+.|++||++|+++.++. +++. ...   +.++.+++++.+++++|+
T Consensus       452 q~K~~L~~lL~~f~~~~~~~-t~~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  452 EAKLALAHLLRNFSFEVCPT-TIIP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             HHHHHHHHHHhhCEEecCCc-ccCc-ccCCccceeeecCCceEEEEEeCC
Confidence            99999999999999999874 3222 333   778889999999999985


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=4.3e-77  Score=599.57  Aligned_cols=479  Identities=39%  Similarity=0.726  Sum_probs=383.6

Q ss_pred             CCCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchh
Q 009347           36 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVA  115 (537)
Q Consensus        36 ~~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~  115 (537)
                      ++.+.|||| .++|++||+..+..+ ++..+.+++++||++|++++|+.++++++||+++++++.++...|.+++.....
T Consensus        31 ~~~~~pPgp-~~~P~iG~~~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~  108 (517)
T PLN02687         31 HKRPLPPGP-RGWPVLGNLPQLGPK-PHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA  108 (517)
T ss_pred             CCCCCCccC-CCCCccccHHhcCCc-hhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence            344678898 789999999888655 788999999999999999999999999999999999999887778777654333


Q ss_pred             hhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchh
Q 009347          116 EILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMN  195 (537)
Q Consensus       116 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~  195 (537)
                      ...+....+++++.+|+.|+++|+++..+.|+...++.+.+.++++++.+++.+.+.        .    .+ + ++|+.
T Consensus       109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--------~----~~-~-~vd~~  174 (517)
T PLN02687        109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ--------H----GT-A-PVNLG  174 (517)
T ss_pred             hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh--------c----CC-C-ceeHH
Confidence            333433345677888999999999997578999999999999999999999998763        1    22 4 79999


Q ss_pred             HHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHHHH
Q 009347          196 KWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELDVL  275 (537)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  275 (537)
                      +++..+++|+++.++||.++.+.. ..+  ....+.+.+..++.......+...+|++.+++.....++..+..+.+.++
T Consensus       175 ~~~~~~t~dvi~~~~fG~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~  251 (517)
T PLN02687        175 QLVNVCTTNALGRAMVGRRVFAGD-GDE--KAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAM  251 (517)
T ss_pred             HHHHHHHHHHHHHHHhCccccccC-Ccc--hHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHH
Confidence            999999999999999999873221 111  33456666666655433322334567666553333345566677788889


Q ss_pred             HHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHhC
Q 009347          276 AQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLNH  354 (537)
Q Consensus       276 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~  354 (537)
                      +.+.++++++.....    ++...|+++.|++...+......+..+ ++++.+++.++++||+|||+++++|++++|++|
T Consensus       252 ~~~~i~~r~~~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~  327 (517)
T PLN02687        252 MNGIIEEHKAAGQTG----SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRH  327 (517)
T ss_pred             HHHHHHHHHHhcccc----CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhC
Confidence            999999887654321    134579999999865432111112345 899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEeccccccC
Q 009347          355 RDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHR  434 (537)
Q Consensus       355 p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~  434 (537)
                      |++|+|+++|++++++.++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||
T Consensus       328 P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~  407 (517)
T PLN02687        328 PDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIAR  407 (517)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcC
Confidence            99999999999999987778999999999999999999999999999877899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCCCCc--cccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCC---CCCc
Q 009347          435 DPRVWPEPYKFKPERFLTTHKHI--DVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDE---PVDM  509 (537)
Q Consensus       435 d~~~~~~p~~F~P~R~l~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~  509 (537)
                      ||++|+||++|+||||++++...  .....+..++|||+|+|.|+|++||++|+++++++||++|++++.++.   +++.
T Consensus       408 d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  487 (517)
T PLN02687        408 DPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNM  487 (517)
T ss_pred             CcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCc
Confidence            99999999999999999753211  111245689999999999999999999999999999999999997663   2323


Q ss_pred             ccccceeeeecCceEEEEeccccccCCC
Q 009347          510 SEGMSLTLVKTTPVKVLITPRLSASLYG  537 (537)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~  537 (537)
                      .....++..+..++.+++++|.=-+-||
T Consensus       488 ~~~~~~~~~~~~~~~~~~~~R~~~~~~~  515 (517)
T PLN02687        488 EEAYGLTLQRAVPLMVHPRPRLLPSAYG  515 (517)
T ss_pred             ccccceeeecCCCeEEeeccCCChhhcc
Confidence            3334555666779999999995335665


No 5  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.1e-77  Score=596.74  Aligned_cols=482  Identities=35%  Similarity=0.646  Sum_probs=386.3

Q ss_pred             hcccccccCCCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCcccc
Q 009347           28 VSRNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFA  107 (537)
Q Consensus        28 ~~~~~~~~~~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~  107 (537)
                      .++++....+.+.|||| +++|++||+..+... ++..+.+++++||++|++++|++++|+|+||+++++++.++...|.
T Consensus        20 ~~~~~~~~~~~~~pPgp-~~~Pl~G~l~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~   97 (504)
T PLN00110         20 FIRSLLPKPSRKLPPGP-RGWPLLGALPLLGNM-PHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFS   97 (504)
T ss_pred             HHHHHhhcccCCCcccC-CCCCeeechhhcCCc-hHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhc
Confidence            33444444555789998 789999998877654 7889999999999999999999999999999999999998877787


Q ss_pred             CCCccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCc
Q 009347          108 SRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNN  187 (537)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g  187 (537)
                      .++..........+..+++++.+|+.|+++|+.++.+.|++..++.+.+.+.++++.+++.+.+.        ..   .|
T Consensus        98 ~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~--------~~---~g  166 (504)
T PLN00110         98 NRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLEL--------SQ---RG  166 (504)
T ss_pred             CCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHh--------cc---CC
Confidence            77654322222223334567888999999999998568999999999999999999999998764        21   34


Q ss_pred             cccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHH
Q 009347          188 KKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKK  267 (537)
Q Consensus       188 ~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~  267 (537)
                       + ++|+.+++..+++|+++.++||.++....  .+  ...++.+.+...+.......+...+|++.|++.....++..+
T Consensus       167 -~-~~~~~~~~~~~~~~vi~~~~fg~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~  240 (504)
T PLN00110        167 -E-PVVVPEMLTFSMANMIGQVILSRRVFETK--GS--ESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKH  240 (504)
T ss_pred             -C-cEeHHHHHHHHHHHHHHHHHhCCcccccC--ch--hHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHH
Confidence             4 78999999999999999999999762111  11  334566666666544333333345676665533334455666


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHH
Q 009347          268 NARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTW  346 (537)
Q Consensus       268 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~  346 (537)
                      ..+.+.+++.+.++++++....     +....|+++.+++...+.    .+..+ ++++.++++++++||+|||+++++|
T Consensus       241 ~~~~~~~~~~~~i~~~~~~~~~-----~~~~~d~l~~ll~~~~~~----~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~  311 (504)
T PLN00110        241 LHKKFDKLLTRMIEEHTASAHE-----RKGNPDFLDVVMANQENS----TGEKLTLTNIKALLLNLFTAGTDTSSSVIEW  311 (504)
T ss_pred             HHHHHHHHHHHHHHHHHhhccc-----cccCCChhhHHhhccccc----CCCCCCHHHHHHHHHhhhcccccchHHHHHH
Confidence            6777888888888887664332     123569999999754322    23345 8899999999999999999999999


Q ss_pred             HHHHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEE
Q 009347          347 ILSLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLY  426 (537)
Q Consensus       347 ~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~  426 (537)
                      ++++|++||++|+|+++|++++++.++.++++++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|.
T Consensus       312 ~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~  391 (504)
T PLN00110        312 SLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLS  391 (504)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEE
Confidence            99999999999999999999999877779999999999999999999999999998778999999999999999999999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCccCCCCCc-cccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCC
Q 009347          427 VNVWKIHRDPRVWPEPYKFKPERFLTTHKHI-DVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDE  505 (537)
Q Consensus       427 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~  505 (537)
                      ++.+.+||||++||||++|+||||++++... ........++|||+|+|.|+|++||++|+++++++|+++|++++.++.
T Consensus       392 ~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  471 (504)
T PLN00110        392 VNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV  471 (504)
T ss_pred             EeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC
Confidence            9999999999999999999999999653211 111123579999999999999999999999999999999999997765


Q ss_pred             CCCcccccceeeeecCceEEEEeccccccCCC
Q 009347          506 PVDMSEGMSLTLVKTTPVKVLITPRLSASLYG  537 (537)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  537 (537)
                      +++.....++++.++.++.+++++|..-+-|.
T Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  503 (504)
T PLN00110        472 ELNMDEAFGLALQKAVPLSAMVTPRLHQSAYA  503 (504)
T ss_pred             ccCcccccccccccCCCceEeeccCCCchhcc
Confidence            54444445677778899999999997766663


No 6  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.4e-76  Score=594.45  Aligned_cols=503  Identities=31%  Similarity=0.608  Sum_probs=390.8

Q ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecC
Q 009347           12 AAILTLIIFLYTLLLFVSRNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSN   91 (537)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d   91 (537)
                      +.++++++++.++++++.++ +..+..+.|||| +++|++||+..+... ++..+.+++++||++|++++++.++++++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ppgp-~~~pl~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~g~~~~v~v~d   82 (514)
T PLN03112          6 LSLLFSVLIFNVLIWRWLNA-SMRKSLRLPPGP-PRWPIVGNLLQLGPL-PHRDLASLCKKYGPLVYLRLGSVDAITTDD   82 (514)
T ss_pred             HHHHHHHHHHHHHHHHHccc-cccCCCCCccCC-CCCCeeeeHHhcCCc-hHHHHHHHHHHhCCeEEEEecCccEEEECC
Confidence            33333444443444443333 233444678999 789999999888654 788999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCccccCCCccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHH
Q 009347           92 WEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYD  171 (537)
Q Consensus        92 ~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~  171 (537)
                      |+++++|+.++...|+.++.........++...++++.+|+.|+.+|+++..+.|+..+++.+.+.+.+.++.+++.+.+
T Consensus        83 pe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~  162 (514)
T PLN03112         83 PELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWE  162 (514)
T ss_pred             HHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            99999999988777877655322222222333455777899999999997657899999999999999999999998765


Q ss_pred             HHhhhcCCCCCCccCccccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccc
Q 009347          172 FWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLP  251 (537)
Q Consensus       172 ~~~~~~~~~~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  251 (537)
                      .        ..   .| + ++|+.+.++.+++++++.++||.++.+... .+.+....+...+..++.......+...+|
T Consensus       163 ~--------~~---~~-~-~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  228 (514)
T PLN03112        163 A--------AQ---TG-K-PVNLREVLGAFSMNNVTRMLLGKQYFGAES-AGPKEAMEFMHITHELFRLLGVIYLGDYLP  228 (514)
T ss_pred             h--------hc---cC-C-eeeHHHHHHHHHHHHHHHHHcCCccccccc-cchHHHHHHHHHHHHHHHHcCCCcHHHhCh
Confidence            4        11   23 4 799999999999999999999998622211 111133456666666654433333344567


Q ss_pred             ccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHH
Q 009347          252 FLRWFDIGGDERAMKKNARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCL  330 (537)
Q Consensus       252 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~  330 (537)
                      ++.+++.....++.++..+.+.+++.+.++++++..+...  ......|+++.+++...++    .+..+ ++++.+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~----~~~~l~~~~i~~~~~  302 (514)
T PLN03112        229 AWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKL--PGGKDMDFVDVLLSLPGEN----GKEHMDDVEIKALMQ  302 (514)
T ss_pred             HHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--cCCccchHHHHHHHhhccc----cccCCCHHHHHHHHH
Confidence            6655533333456667778888889999988876543211  0123569999999864332    12235 899999999


Q ss_pred             HHHHhhhhchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccC
Q 009347          331 ALILAASDTSKITLTWILSLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTE  410 (537)
Q Consensus       331 ~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~  410 (537)
                      ++++||+|||+++++|++++|++||++|+||++|+++++++++.++++++++|||++|||+||||++|+++...+|.+.+
T Consensus       303 ~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~  382 (514)
T PLN03112        303 DMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLR  382 (514)
T ss_pred             HHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCC
Confidence            99999999999999999999999999999999999999988778999999999999999999999999999866899999


Q ss_pred             CCcccceeeCCCcEEEeccccccCCCCCCCCCCCCCCCCccCCCCC-cc-ccCCcccccccCCCCCCCCchhhHHHHHHH
Q 009347          411 DCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKH-ID-VRGQNFELLPFSSGRRMCPGPSFAIPVTHL  488 (537)
Q Consensus       411 d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~  488 (537)
                      |++++||.||||+.|.++.+++||||++||||++|+||||..+.+. .. ..+.+..++|||+|+|.|||++||++|+++
T Consensus       383 d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~  462 (514)
T PLN03112        383 ATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLM  462 (514)
T ss_pred             CeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998654211 11 112356899999999999999999999999


Q ss_pred             HHHHHHhhcceeCCCCC---CCCcccccceeeeecCceEEEEeccccccCCC
Q 009347          489 TLATLLHGFDFETPLDE---PVDMSEGMSLTLVKTTPVKVLITPRLSASLYG  537 (537)
Q Consensus       489 ~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  537 (537)
                      +++.||++|+|++..+.   ++......++.+++++++.++++||..--.||
T Consensus       463 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  514 (514)
T PLN03112        463 ALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLAPHLYG  514 (514)
T ss_pred             HHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCCcccccC
Confidence            99999999999987552   23333344566777889999999999888887


No 7  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=6e-76  Score=590.96  Aligned_cols=467  Identities=32%  Similarity=0.567  Sum_probs=370.0

Q ss_pred             CCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchhh
Q 009347           37 KKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAE  116 (537)
Q Consensus        37 ~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~  116 (537)
                      ..+.|||| +++|++||+..+....++.++.+++++||++|++++|+.++++++||+++++|+.++...|..++......
T Consensus        26 ~~~~pPgp-~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         26 SLRLPPGP-KGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCcCC-CCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            34679999 78999999988855336789999999999999999999999999999999999998877787776543222


Q ss_pred             hhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhH
Q 009347          117 ILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNK  196 (537)
Q Consensus       117 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~  196 (537)
                      ........+.+...++.|+++|+.+..+.|++.++..+.+.+++.++.+++++.+.        ..   .+ + ++|+.+
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~--------~~---~~-~-~vd~~~  171 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKA--------AD---QS-G-TVDLSE  171 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHh--------cc---CC-C-eEEHHH
Confidence            22222223335567899999999864489999999999999999999999998754        11   22 3 799999


Q ss_pred             HHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccccccccc-CCCcHHHHHHHHHHHHHH
Q 009347          197 WFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFD-IGGDERAMKKNARELDVL  275 (537)
Q Consensus       197 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~  275 (537)
                      .+..+++|+++.++||.++ +..  .+  ....+.+.+...........+...+|++.+++ +....++..++.+.+.++
T Consensus       172 ~~~~~t~dvi~~~~fG~~~-~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~  246 (499)
T PLN03234        172 LLLSFTNCVVCRQAFGKRY-NEY--GT--EMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTY  246 (499)
T ss_pred             HHHHHHHHHHHHHHhCCcc-ccc--ch--hHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999988 322  11  23455555555443332223333455543331 223345677888899999


Q ss_pred             HHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHhC
Q 009347          276 AQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLNH  354 (537)
Q Consensus       276 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~  354 (537)
                      +.+.++++++.....     +...|+++.|++...++.   .+..+ ++++.+++.++++||+|||+++++|++++|++|
T Consensus       247 ~~~~i~~~~~~~~~~-----~~~~d~l~~l~~~~~~~~---~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~  318 (499)
T PLN03234        247 LQELLDETLDPNRPK-----QETESFIDLLMQIYKDQP---FSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKY  318 (499)
T ss_pred             HHHHHHHHHhhcccC-----CCcccHHHHHHHHhhccC---cCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhC
Confidence            999998876543221     245799999987643320   12245 899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEeccccccC
Q 009347          355 RDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHR  434 (537)
Q Consensus       355 p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~  434 (537)
                      |++|+|+++|+++++++.+.++++++++|||++|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||
T Consensus       319 P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~r  398 (499)
T PLN03234        319 PEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSR  398 (499)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhC
Confidence            99999999999999987777899999999999999999999999999876799999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCC-CC--CCcc
Q 009347          435 DPRVW-PEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD-EP--VDMS  510 (537)
Q Consensus       435 d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~-~~--~~~~  510 (537)
                      ||++| +||++|+||||+++..+....+....++|||+|+|.|+|+++|++|++++++.|+++|+|+++++ .+  +...
T Consensus       399 d~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  478 (499)
T PLN03234        399 DTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMD  478 (499)
T ss_pred             CcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcc
Confidence            99999 89999999999975432222235678999999999999999999999999999999999999875 22  3333


Q ss_pred             cccceeeeecCceEEEEecc
Q 009347          511 EGMSLTLVKTTPVKVLITPR  530 (537)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~r  530 (537)
                      ...++...++..+.+..++|
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        479 VMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             cccccccccCCCeEEEeecC
Confidence            34566666777777776665


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.7e-76  Score=591.32  Aligned_cols=466  Identities=31%  Similarity=0.580  Sum_probs=365.6

Q ss_pred             CCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchhh
Q 009347           37 KKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAE  116 (537)
Q Consensus        37 ~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~  116 (537)
                      +.+.|||| +++|++|++..+... .+..+.+|+++||++|++++|+.++++++||+++++|+.++...|+.++......
T Consensus        34 ~~~~ppgp-~~~Pl~G~l~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         34 RLPYPPGP-KGLPIIGNMLMMDQL-THRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             CCCCCcCC-CCCCeeccHHhcCCc-chHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            34689999 789999998777543 5678999999999999999999999999999999999998877777766532222


Q ss_pred             hhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhH
Q 009347          117 ILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNK  196 (537)
Q Consensus       117 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~  196 (537)
                      ....+..+++++.+|+.|+++|+++..++|+...++.+.+.. ++++.+++++.+.             .| + ++|+.+
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~-------------~~-~-~v~~~~  175 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN-------------IG-K-PVNIGE  175 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc-------------CC-C-cEeHHH
Confidence            222222356688889999999999544889999999888864 5788888887542             33 4 799999


Q ss_pred             HHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHHHHH
Q 009347          197 WFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELDVLA  276 (537)
Q Consensus       197 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~  276 (537)
                      ++..+++|++++++||..+ +     +  ....+.+.+..+............+|++.++......++..+..+.+.+++
T Consensus       176 ~~~~~~~~vi~~~~fG~~~-~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  247 (516)
T PLN02183        176 LIFTLTRNITYRAAFGSSS-N-----E--GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFI  247 (516)
T ss_pred             HHHHHHHHHHHhHhhcCcc-c-----c--hHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHH
Confidence            9999999999999999876 2     2  223466666555444333334456676655432223456667777888888


Q ss_pred             HHHHHHHHHhhhcCcc--ccCCCCCCHHHHHHHHhhhcccC------CCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHH
Q 009347          277 QGWLDEHKRKRESGQM--INKEGHEDFMDVMLSILRDDAQQ------LPGDDA-DTINKATCLALILAASDTSKITLTWI  347 (537)
Q Consensus       277 ~~~i~~~~~~~~~~~~--~~~~~~~d~l~~ll~~~~~~~~~------~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~  347 (537)
                      .+.++++.++......  ..+....|+++.+++...++...      ..+..+ ++++.+++.++++||+|||+++++|+
T Consensus       248 ~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~  327 (516)
T PLN02183        248 DDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWA  327 (516)
T ss_pred             HHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHH
Confidence            8888887664432110  01123468999999865432100      012235 89999999999999999999999999


Q ss_pred             HHHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEe
Q 009347          348 LSLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYV  427 (537)
Q Consensus       348 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~  427 (537)
                      +++|++||++|+|+++|++++++.++.++++++++||||+|||+||||++|++|.. .|.+.+|++++||.||||+.|.+
T Consensus       328 l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~  406 (516)
T PLN02183        328 MAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMI  406 (516)
T ss_pred             HHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEE
Confidence            99999999999999999999998666789999999999999999999999999997 69999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCC-
Q 009347          428 NVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEP-  506 (537)
Q Consensus       428 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-  506 (537)
                      +.+++||||++|+||++|+||||++++.. ...+....|+|||+|+|.|+|++||++|++++++.|+++|++++.++.. 
T Consensus       407 ~~~~~hrd~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~  485 (516)
T PLN02183        407 NAWAIGRDKNSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKP  485 (516)
T ss_pred             ehhhhcCCccccCCccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCC
Confidence            99999999999999999999999965421 1123456899999999999999999999999999999999999877632 


Q ss_pred             --CCcccccceeeeecCceEEEEecc
Q 009347          507 --VDMSEGMSLTLVKTTPVKVLITPR  530 (537)
Q Consensus       507 --~~~~~~~~~~~~~~~~~~~~~~~r  530 (537)
                        .......+.+..+..++.+.+++|
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        486 SELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             CCCChhhccccccccCCCcEEEeecC
Confidence              222223344444567889999988


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3.2e-76  Score=590.35  Aligned_cols=479  Identities=23%  Similarity=0.378  Sum_probs=370.1

Q ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecC
Q 009347           12 AAILTLIIFLYTLLLFVSRNYASNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSN   91 (537)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d   91 (537)
                      ++.+++++++++++....+.+.. .+.+.+||| +++|++||+..+... ++..+.+++++||++|++++|+.++++++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgp-~~~p~~G~~~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~   79 (482)
T PTZ00404          3 LFNIILFLFIFYIIHNAYKKYKK-IHKNELKGP-IPIPILGNLHQLGNL-PHRDLTKMSKKYGGIFRIWFADLYTVVLSD   79 (482)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhh-ccCCCCCCC-CCCCeeccHhhhccc-HHHHHHHHHHHhCCeeEEEecCCCEEEECC
Confidence            33444555555554444454443 557889999 789999999888664 889999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCccccCCCccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHH
Q 009347           92 WEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYD  171 (537)
Q Consensus        92 ~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~  171 (537)
                      |+++++|+.++...|..++.......... . ..+++.+|+.|+++|++++ +.|+...++++.+.+.+.++.+++.+.+
T Consensus        80 p~~~~~il~~~~~~~~~r~~~~~~~~~~~-~-~~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~  156 (482)
T PTZ00404         80 PILIREMFVDNFDNFSDRPKIPSIKHGTF-Y-HGIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKK  156 (482)
T ss_pred             HHHHHHHHHhcchhhcCCCCcceeeeecc-C-CceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHH
Confidence            99999999987666766554322211111 1 2346678999999999998 8999999999999999999999999876


Q ss_pred             HHhhhcCCCCCCccCccccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccc
Q 009347          172 FWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLP  251 (537)
Q Consensus       172 ~~~~~~~~~~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  251 (537)
                      .        ..   .| . .+|+.+++..+++|+++.++||.++ +...+..++....+.+.+..++.......+...++
T Consensus       157 ~--------~~---~~-~-~vd~~~~~~~~~~dvi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (482)
T PTZ00404        157 I--------ES---SG-E-TFEPRYYLTKFTMSAMFKYIFNEDI-SFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIE  222 (482)
T ss_pred             H--------Hh---cC-C-ccCHHHHHHHHHHHHHHHHHhcccc-ccccccchhHHHHHHHHHHHHHHHhCCCchhhhhh
Confidence            3        11   23 3 6999999999999999999999987 33211111123456666666655443322222233


Q ss_pred             ccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCchhhHHHHHHH
Q 009347          252 FLRWFDIGGDERAMKKNARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDADTINKATCLA  331 (537)
Q Consensus       252 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~  331 (537)
                      ++.++. ........+..+.+.+++.+.+++++++.+.      +...|+++.|++...+.    .+ ....++.+++.+
T Consensus       223 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~dll~~ll~~~~~~----~~-~~~~~i~~~~~~  290 (482)
T PTZ00404        223 ITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP------EVPRDLLDLLIKEYGTN----TD-DDILSILATILD  290 (482)
T ss_pred             Hhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC------CCcccHHHHHHHHhccC----Cc-ccHHHHHHHHHH
Confidence            222211 1112223345566677777777665543221      23579999999864321    11 113458889999


Q ss_pred             HHHhhhhchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCC
Q 009347          332 LILAASDTSKITLTWILSLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTED  411 (537)
Q Consensus       332 ~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d  411 (537)
                      +++||+|||+++++|++|+|++||++|+||++|++++++++..++++++++||||+|||+||||++|+++...+|.+.+|
T Consensus       291 ~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d  370 (482)
T PTZ00404        291 FFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSND  370 (482)
T ss_pred             HHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCC
Confidence            99999999999999999999999999999999999999876778999999999999999999999999997668999999


Q ss_pred             Ccc-cceeeCCCcEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHH
Q 009347          412 CTV-NDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTL  490 (537)
Q Consensus       412 ~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l  490 (537)
                      +++ +||.||||+.|.++.+++||||++||||++|+||||++..       ....|+|||+|+|.|+|++||++|+++++
T Consensus       371 ~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~l  443 (482)
T PTZ00404        371 IIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYLAF  443 (482)
T ss_pred             EEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-------CCCceeccCCCCCCCccHHHHHHHHHHHH
Confidence            999 9999999999999999999999999999999999998642       45689999999999999999999999999


Q ss_pred             HHHHhhcceeCCCCCCCCcccccceeeeecCceEEEEecc
Q 009347          491 ATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPR  530 (537)
Q Consensus       491 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  530 (537)
                      ++|+++|+++++++++++.....++++. +.++.|++++|
T Consensus       444 a~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        444 SNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             HHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            9999999999876655444444456665 67899999987


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.2e-74  Score=582.17  Aligned_cols=486  Identities=23%  Similarity=0.400  Sum_probs=371.2

Q ss_pred             HHHHHhcccccccCCCCCCCCCCCCCcceeeccccCC--CcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHH
Q 009347           23 TLLLFVSRNYASNKKKRGPPEAGGAWPVIGHLHLLGR--FPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLT  100 (537)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~Pgp~~~~p~iG~~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~  100 (537)
                      +++++.......+++.+.|||| +++|++||+..+..  ..++..+.+++++||++|++++|+.++++++||+++++++.
T Consensus        19 ~~~~~~~~~~~~~~~~~lpPgp-~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~   97 (519)
T PLN00168         19 LLLLGKHGGRGGKKGRRLPPGP-PAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALV   97 (519)
T ss_pred             HHhhhhhhccCCCCCCCCCcCC-CCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHH
Confidence            3333333333333455678898 78999999876532  23678899999999999999999999999999999999999


Q ss_pred             hCCccccCCCccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009347          101 THDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYK  180 (537)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  180 (537)
                      ++...|+.++........+.+...+.+..+|+.|+++||.+..+.|+..+++++.+.+++.++.+++.+.+.        
T Consensus        98 ~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--------  169 (519)
T PLN00168         98 ERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRRE--------  169 (519)
T ss_pred             hcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence            888888777664444444433223333478999999988544489999999999999999999999998764        


Q ss_pred             CCCccCccccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcc-ccccccccccccccccCC
Q 009347          181 SSDHNNNKKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFS-GKFVVSDSLPFLRWFDIG  259 (537)
Q Consensus       181 ~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~  259 (537)
                      ..   .+ . .+|+.+.+..++.++++.++||.+++ .    +  ....+......+.... ....+...+|++.+....
T Consensus       170 ~~---~~-~-~v~~~~~~~~~~~~ii~~~~fG~~~~-~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~  237 (519)
T PLN00168        170 AE---DA-A-APRVVETFQYAMFCLLVLMCFGERLD-E----P--AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFR  237 (519)
T ss_pred             cC---CC-C-CcCHHHHHHHHHHHHHHHHHcCCCcC-h----h--hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhh
Confidence            11   22 3 68999999999999999999999872 1    1  1223333333222111 112233455654322111


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc----ccc--CCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHH
Q 009347          260 GDERAMKKNARELDVLAQGWLDEHKRKRESGQ----MIN--KEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLAL  332 (537)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~--~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~  332 (537)
                      ...++..+..+.+.+++.+.++++++......    ...  .....|+++.|++....+   ..+..+ ++++.+++.++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~~lt~~~i~~~~~~l  314 (519)
T PLN00168        238 GRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPE---DGDRALTDDEIVNLCSEF  314 (519)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccc---cccCCCCHHHHHHHHHHH
Confidence            22345556777888999999998876532110    000  012468999999764322   012346 89999999999


Q ss_pred             HHhhhhchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCC-CCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCC
Q 009347          333 ILAASDTSKITLTWILSLLLNHRDVLKKAQNELDVHIGKR-RQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTED  411 (537)
Q Consensus       333 ~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d  411 (537)
                      ++||+|||+++++|++++|++||++|+|+++|++++++++ +.++++++++||||+|||+||||++|+++...+|.+.+|
T Consensus       315 ~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d  394 (519)
T PLN00168        315 LNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAED  394 (519)
T ss_pred             HHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCC
Confidence            9999999999999999999999999999999999999753 568999999999999999999999999998778999999


Q ss_pred             CcccceeeCCCcEEEeccccccCCCCCCCCCCCCCCCCccCCCCCc--c-ccCCcccccccCCCCCCCCchhhHHHHHHH
Q 009347          412 CTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHI--D-VRGQNFELLPFSSGRRMCPGPSFAIPVTHL  488 (537)
Q Consensus       412 ~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~--~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~  488 (537)
                      ++++||.||||+.|.++.+++||||++||||++|+||||++...+.  . .......|+|||+|+|.|||++||++|+++
T Consensus       395 ~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~  474 (519)
T PLN00168        395 MEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEY  474 (519)
T ss_pred             ccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999743111  1 112346899999999999999999999999


Q ss_pred             HHHHHHhhcceeCCCCCCCCcccccceeeeecCceEEEEecccc
Q 009347          489 TLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPRLS  532 (537)
Q Consensus       489 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  532 (537)
                      +++.||++|+|++.++.+++......++..++.+++|++++|+.
T Consensus       475 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        475 FVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             HHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence            99999999999997664444433344566677899999999975


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=8.3e-75  Score=583.29  Aligned_cols=470  Identities=30%  Similarity=0.498  Sum_probs=357.3

Q ss_pred             CCCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchh
Q 009347           36 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVA  115 (537)
Q Consensus        36 ~~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~  115 (537)
                      ++.+.|||| +++|++|++..+..+..+..+.+++++||++|++++|++++|+++||+++++|+.+++..|..++.....
T Consensus        27 ~~~~~pPgp-~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~  105 (503)
T PLN02394         27 KKLKLPPGP-AAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVF  105 (503)
T ss_pred             CcCCCCcCC-CCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchH
Confidence            445789999 7899999998887665678999999999999999999999999999999999999877777766543333


Q ss_pred             hhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchh
Q 009347          116 EILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMN  195 (537)
Q Consensus       116 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~  195 (537)
                      ........+.+++.+|+.|+++|+.+..+.|++..++.+.+.++++++.+++.+.+.        ..  ..+ + .+|+.
T Consensus       106 ~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~--------~~--~~~-~-~v~~~  173 (503)
T PLN02394        106 DIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRAN--------PE--AAT-E-GVVIR  173 (503)
T ss_pred             hHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHh--------hh--ccC-C-cEecH
Confidence            333222334567788999999999986688999999999999999999999998754        11  012 3 68999


Q ss_pred             HHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccc--ccccccccccccccCCCcHHHHHHHHHHHH
Q 009347          196 KWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGK--FVVSDSLPFLRWFDIGGDERAMKKNARELD  273 (537)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~  273 (537)
                      +.++.+++|++++++||.++ +..  .+ .....+.............  ..+...+|++.+.. ....+..........
T Consensus       174 ~~~~~~~~dvi~~~~fG~~~-~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  248 (503)
T PLN02394        174 RRLQLMMYNIMYRMMFDRRF-ESE--DD-PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRL  248 (503)
T ss_pred             HHHHHHHHHHHHHHHhCCCc-ccc--cc-hhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHH
Confidence            99999999999999999988 332  11 1122222222222221111  12223445443221 111122222222222


Q ss_pred             -HHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHH
Q 009347          274 -VLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLL  351 (537)
Q Consensus       274 -~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L  351 (537)
                       .+....++++++..+.... +.+...|+++.|++...+      + .+ ++++..++.++++||+|||+++++|++|+|
T Consensus       249 ~~~~~~~i~~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~------~-~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L  320 (503)
T PLN02394        249 ALFKDYFVDERKKLMSAKGM-DKEGLKCAIDHILEAQKK------G-EINEDNVLYIVENINVAAIETTLWSIEWGIAEL  320 (503)
T ss_pred             HHHHHHHHHHHHHHhhhccC-CcchhhhHHHHHHhcccc------C-CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHH
Confidence             2334456666543221100 112357899999976432      1 24 788899999999999999999999999999


Q ss_pred             HhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEecccc
Q 009347          352 LNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWK  431 (537)
Q Consensus       352 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~  431 (537)
                      ++||++|+||++|++++++.++.++++++++||||+|||+|+||++|++|...+|.+.+|++++||.||||+.|.+++|+
T Consensus       321 ~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~  400 (503)
T PLN02394        321 VNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWW  400 (503)
T ss_pred             HcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHH
Confidence            99999999999999999987677899999999999999999999999999987899999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCC-CCCcc
Q 009347          432 IHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDE-PVDMS  510 (537)
Q Consensus       432 ~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~  510 (537)
                      +||||++|+||++|+||||++++++.........++|||+|+|.|+|++||++|++++++.|+++|++++.++. +++..
T Consensus       401 ~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  480 (503)
T PLN02394        401 LANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVS  480 (503)
T ss_pred             HhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccc
Confidence            99999999999999999999654221112245689999999999999999999999999999999999987775 34444


Q ss_pred             cccc-eeeeecCceEEEEeccc
Q 009347          511 EGMS-LTLVKTTPVKVLITPRL  531 (537)
Q Consensus       511 ~~~~-~~~~~~~~~~~~~~~r~  531 (537)
                      +..+ +....+.+++|++.||.
T Consensus       481 ~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        481 EKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             cccCceeeccCCCceEEeecCC
Confidence            4343 45556779999999996


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=5.7e-74  Score=575.40  Aligned_cols=464  Identities=30%  Similarity=0.542  Sum_probs=357.5

Q ss_pred             CCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchhh
Q 009347           37 KKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAE  116 (537)
Q Consensus        37 ~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~  116 (537)
                      ..+.|||| +++|++||+..+....++..+.+|+++||++|++++++.++++++||+.+++|+.+++..|.+++......
T Consensus        27 ~~~~ppgp-~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~  105 (502)
T PLN02966         27 RYKLPPGP-SPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHE  105 (502)
T ss_pred             CCCCCcCC-CCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccce
Confidence            34678998 78999999988754447889999999999999999999999999999999999998776676554332222


Q ss_pred             hhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhH
Q 009347          117 ILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNK  196 (537)
Q Consensus       117 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~  196 (537)
                      ....+..+..++.+|+.|+.+|+++..++|++.+++.+.+.+++.++.+++.+.+.        ..   .+ + .+|+.+
T Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--------~~---~~-~-~vdl~~  172 (502)
T PLN02966        106 FISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKA--------AD---KS-E-VVDISE  172 (502)
T ss_pred             eeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh--------cc---CC-C-ceeHHH
Confidence            22233333446667999999999944489999999999999999999999999764        21   23 4 799999


Q ss_pred             HHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccccccccc-CCCcHHHHHHHHHHHHHH
Q 009347          197 WFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFD-IGGDERAMKKNARELDVL  275 (537)
Q Consensus       197 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~  275 (537)
                      ++..+++|+++.++||.++ +..  ++  ....+.+.+...........+...+|++..+. ++...+......+...++
T Consensus       173 ~~~~~t~dvi~~~~fG~~~-~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  247 (502)
T PLN02966        173 LMLTFTNSVVCRQAFGKKY-NED--GE--EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTY  247 (502)
T ss_pred             HHHHHHHHHHHHHHhCCcc-Ccc--ch--HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHH
Confidence            9999999999999999988 322  22  33455555555444433333344455433221 122223333445566677


Q ss_pred             HHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHhC
Q 009347          276 AQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLNH  354 (537)
Q Consensus       276 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~  354 (537)
                      +.+.++++.+....     .....++++.|++..++..   .+..+ ++++.++++++++||+|||+++++|++|+|++|
T Consensus       248 ~~~~i~~~~~~~~~-----~~~~~~~l~~l~~~~~~~~---~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~  319 (502)
T PLN02966        248 IQEVVNETLDPKRV-----KPETESMIDLLMEIYKEQP---FASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKY  319 (502)
T ss_pred             HHHHHHHHHhcccc-----ccccccHHHHHHHHHhccC---cCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhC
Confidence            77777765543211     1235689999997654321   12235 889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCC--CCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEeccccc
Q 009347          355 RDVLKKAQNELDVHIGKR--RQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKI  432 (537)
Q Consensus       355 p~~~~~l~~Ei~~~~~~~--~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~  432 (537)
                      |++|+|+++|++++++++  +.++++++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.++++++
T Consensus       320 P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~  399 (502)
T PLN02966        320 PQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAV  399 (502)
T ss_pred             HHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccc
Confidence            999999999999998752  357999999999999999999999999998768999999999999999999999999999


Q ss_pred             cCCCCCC-CCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCC---CC
Q 009347          433 HRDPRVW-PEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEP---VD  508 (537)
Q Consensus       433 ~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~  508 (537)
                      ||||++| |||++|+||||++.+..  ....+..|+|||+|+|.|+|++||++|++++++.||++|+|++.++..   ++
T Consensus       400 ~rdp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~  477 (502)
T PLN02966        400 SRDEKEWGPNPDEFRPERFLEKEVD--FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDIN  477 (502)
T ss_pred             cCCcccccCChhhCChhhhcCCCCC--cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCC
Confidence            9999999 99999999999965321  122457899999999999999999999999999999999999987642   33


Q ss_pred             cccccceeeeecCceEEEEec
Q 009347          509 MSEGMSLTLVKTTPVKVLITP  529 (537)
Q Consensus       509 ~~~~~~~~~~~~~~~~~~~~~  529 (537)
                      .....+++..++..+.+..++
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~~  498 (502)
T PLN02966        478 MDVMTGLAMHKSQHLKLVPEK  498 (502)
T ss_pred             cccccCeeeccCCCeEEEEEe
Confidence            333445555444455544443


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.9e-73  Score=566.21  Aligned_cols=461  Identities=25%  Similarity=0.421  Sum_probs=366.3

Q ss_pred             CCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchhhhhcc
Q 009347           41 PPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGF  120 (537)
Q Consensus        41 ~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~~~~~  120 (537)
                      |||| +++|++||+..+...+++..+.+|+++||++|++++|+.++++|+||+++++|+.++...|+.++.......++.
T Consensus         1 ppgp-~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~   79 (466)
T PLN02655          1 VPAV-PGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTR   79 (466)
T ss_pred             CcCC-CCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhc
Confidence            6898 789999999888655588999999999999999999999999999999999999998888877754333332332


Q ss_pred             CCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhHHHHH
Q 009347          121 NFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNKWFED  200 (537)
Q Consensus       121 ~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~~~~~  200 (537)
                      +...++...+|+.|+++|+.+..++++...++.+.+.+++.++.+++.+.+.+        ... .+ + ++|+.+.+..
T Consensus        80 ~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~-~~-~-~vd~~~~~~~  148 (466)
T PLN02655         80 DKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALV--------KDD-PH-S-PVNFRDVFEN  148 (466)
T ss_pred             CCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhc--------ccc-CC-C-ceeHHHHHHH
Confidence            23234444569999999988876888988889999999999999999887642        111 12 3 7999999999


Q ss_pred             HHHHHHHHhhhcccccCCCCCcch----hhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHHHHH
Q 009347          201 VTLNAILRVTVGQRCNSSSSQEDT----DHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELDVLA  276 (537)
Q Consensus       201 ~~~~~i~~~~fG~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~  276 (537)
                      +++|+++.++||.++ +.....+.    .....+...+..++.......+...+|++++++.....+...+....+.+++
T Consensus       149 ~t~dvi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~  227 (466)
T PLN02655        149 ELFGLSLIQALGEDV-ESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVM  227 (466)
T ss_pred             HHHHHHHHHHhcccc-ccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHH
Confidence            999999999999987 32210110    0012334444444444333334456777666643323334444445566788


Q ss_pred             HHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHhCH
Q 009347          277 QGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLNHR  355 (537)
Q Consensus       277 ~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p  355 (537)
                      ...+++++++...+     ....|+++.+++...         .+ ++++.+++.++++||+|||+++++|++++|++||
T Consensus       228 ~~~i~~~~~~~~~~-----~~~~d~l~~ll~~~~---------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p  293 (466)
T PLN02655        228 KALIKQQKKRIARG-----EERDCYLDFLLSEAT---------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNP  293 (466)
T ss_pred             HHHHHHHHHhhcCC-----CCcccHHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence            88888887654432     234689999997531         24 8899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEeccccccCC
Q 009347          356 DVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRD  435 (537)
Q Consensus       356 ~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d  435 (537)
                      ++|+++++|++++.+++. ++++++++||||+||++||||++|+++...+|.+.+|++++||.||||+.|.++.+++|||
T Consensus       294 ~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d  372 (466)
T PLN02655        294 DKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMD  372 (466)
T ss_pred             HHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCC
Confidence            999999999999998744 9999999999999999999999999998878999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCcccccce
Q 009347          436 PRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSL  515 (537)
Q Consensus       436 ~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  515 (537)
                      |++|+||++|+||||++++...   .....++|||+|+|.|||++||..|++++++.||++|++++.++.. +..+..++
T Consensus       373 ~~~~~~p~~F~PeR~~~~~~~~---~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~  448 (466)
T PLN02655        373 KKRWENPEEWDPERFLGEKYES---ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQL  448 (466)
T ss_pred             cccCCChhccCccccCCCCccc---CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhhe
Confidence            9999999999999999654211   1346899999999999999999999999999999999999976632 22234567


Q ss_pred             eeeecCceEEEEeccccc
Q 009347          516 TLVKTTPVKVLITPRLSA  533 (537)
Q Consensus       516 ~~~~~~~~~~~~~~r~~~  533 (537)
                      ++.+++++.|++++|.++
T Consensus       449 ~~~~~~~~~~~~~~r~~~  466 (466)
T PLN02655        449 TTQKLHPLHAHLKPRGSM  466 (466)
T ss_pred             eEeecCCcEEEEeecCCC
Confidence            777889999999999764


No 14 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4.4e-72  Score=560.15  Aligned_cols=475  Identities=26%  Similarity=0.461  Sum_probs=355.4

Q ss_pred             CCCCCCCCCCcceeeccccCCCcH-hHHHHHHHHhh-CCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchhh
Q 009347           39 RGPPEAGGAWPVIGHLHLLGRFPL-HRVLGDMADKY-GPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAE  116 (537)
Q Consensus        39 ~~~Pgp~~~~p~iG~~~~~~~~~~-~~~~~~~~~ky-G~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~  116 (537)
                      ..|||| +++|++||+..+..+.+ ...+.+..++| |+||++++|+.++|+|+||+.+++++.+++..|+.++......
T Consensus        40 ~~PPgp-~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         40 QLPPGP-PGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCcCC-CCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            468898 78999999988743212 23455666665 8999999999999999999999999998878888887654444


Q ss_pred             hhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhH
Q 009347          117 ILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNK  196 (537)
Q Consensus       117 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~  196 (537)
                      ..+.+..++++..+|+.|+.+|++++...++....+.+....+.+++.+++.+.+.        ..   .+ . ++|+.+
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------~~---~~-~-~vd~~~  185 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSM--------YQ---RS-E-TVDVRE  185 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh--------cc---cC-C-ceeHHH
Confidence            44443334566667999999999998434455555666666667788899998764        11   23 3 799999


Q ss_pred             HHHHHHHHHHHHhhhcccccCCCCC---cchhhHHHHHHHHHHHHh---cccccccccccc-ccccccCCCcHHHHHHHH
Q 009347          197 WFEDVTLNAILRVTVGQRCNSSSSQ---EDTDHEGAWKEELTKFFA---FSGKFVVSDSLP-FLRWFDIGGDERAMKKNA  269 (537)
Q Consensus       197 ~~~~~~~~~i~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~  269 (537)
                      .+..++++++++++||.++ .....   .+......+...+.....   ........+.+| ++.+++.....++.....
T Consensus       186 ~~~~~t~~vi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  264 (534)
T PLN03018        186 LSRVYGYAVTMRMLFGRRH-VTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNV  264 (534)
T ss_pred             HHHHHHHHHHHHHHhCCcc-ccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHH
Confidence            9999999999999999987 32110   010011112212222111   111111122334 444322222334455556


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCC-Cc-hhhHHHHHHHHHHhhhhchHHHHHHH
Q 009347          270 RELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGD-DA-DTINKATCLALILAASDTSKITLTWI  347 (537)
Q Consensus       270 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~-~~-~~~i~~~~~~~~~ag~dtt~~~l~~~  347 (537)
                      +.+.+++.+.++++++......  ......|+++.|++...++     +. .+ ++++.+++.++++||+|||+++++|+
T Consensus       265 ~~~~~~~~~~i~~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~-----~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~  337 (534)
T PLN03018        265 NLVRSYNNPIIDERVELWREKG--GKAAVEDWLDTFITLKDQN-----GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWT  337 (534)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcc--CCCCcccHHHHHHHhhccc-----CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            6788888899988876432210  0113469999999865432     22 25 89999999999999999999999999


Q ss_pred             HHHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEe
Q 009347          348 LSLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYV  427 (537)
Q Consensus       348 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~  427 (537)
                      +++|++||++|+++++|++++++.++.++.+++++||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|.+
T Consensus       338 l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~  417 (534)
T PLN03018        338 LGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHV  417 (534)
T ss_pred             HHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEE
Confidence            99999999999999999999998777899999999999999999999999999987779999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCccCCCCCc---cccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCC
Q 009347          428 NVWKIHRDPRVWPEPYKFKPERFLTTHKHI---DVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLD  504 (537)
Q Consensus       428 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~---~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~  504 (537)
                      +.+++||||++|+||++|+||||+++++..   ........++|||+|+|.|+|++||++|+++++++|+++|++++.++
T Consensus       418 ~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  497 (534)
T PLN03018        418 CRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQD  497 (534)
T ss_pred             ChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCC
Confidence            999999999999999999999999654211   01124568999999999999999999999999999999999998765


Q ss_pred             C-CCCcccccceeeeecCceEEEEeccccccCC
Q 009347          505 E-PVDMSEGMSLTLVKTTPVKVLITPRLSASLY  536 (537)
Q Consensus       505 ~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  536 (537)
                      . +++.....+.+. .+.++.|++++|..+.+|
T Consensus       498 ~~~~~~~~~~~~~~-~p~~~~v~~~~R~~~~~~  529 (534)
T PLN03018        498 FGPLSLEEDDASLL-MAKPLLLSVEPRLAPNLY  529 (534)
T ss_pred             CCCCCcccccccee-cCCCeEEEEEeccccccc
Confidence            3 444433334344 457999999999655554


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.6e-73  Score=528.91  Aligned_cols=462  Identities=23%  Similarity=0.324  Sum_probs=381.5

Q ss_pred             CCCCCCCCCCCCcceeecccc---CCCcHhHHHHHHHHhhCCeeEEe-cCCeeEEEecCHHHHHHHHHhCCccccCCC-c
Q 009347           37 KKRGPPEAGGAWPVIGHLHLL---GRFPLHRVLGDMADKYGPIFTIR-MGVHRALVVSNWEMAKECLTTHDRVFASRP-K  111 (537)
Q Consensus        37 ~~~~~Pgp~~~~p~iG~~~~~---~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~-~  111 (537)
                      ....+|+| +++|++|.+..+   +..+.|+.....+++|||||+.. +|+...|.+.||++++.+++.++.. .-++ .
T Consensus        48 ~~~~IP~p-~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~-P~Rp~~  125 (519)
T KOG0159|consen   48 PFEEIPGP-KGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKY-PFRPLL  125 (519)
T ss_pred             ChhhcCCC-CCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCC-CCcccc
Confidence            34568999 899999998843   44457889999999999999999 8888999999999999999988542 3332 1


Q ss_pred             cchh--hhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccc
Q 009347          112 ALVA--EILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKK  189 (537)
Q Consensus       112 ~~~~--~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~  189 (537)
                      ..-.  ..-.++...++++.+|+.|++.|..+++..+++++++.+.+.++..++++++++.+.        ... ..++.
T Consensus       126 ~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~--------r~~-~~~~~  196 (519)
T KOG0159|consen  126 IEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQ--------RDP-ERGEL  196 (519)
T ss_pred             cchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHH--------hcc-ccccc
Confidence            1111  111233445668889999999999999889999999999999999999999999987        221 12323


Q ss_pred             cccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHH
Q 009347          190 VLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNA  269 (537)
Q Consensus       190 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  269 (537)
                       +.|+.+.+.++++++|+.++||.++ ++.....+++...|++++..++.....+.+..  ++++++ .+..++++.++.
T Consensus       197 -~~D~~~~l~~wslEsi~~V~l~~rl-G~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p--~l~r~~-~t~~wk~~~~~~  271 (519)
T KOG0159|consen  197 -VPDFAQELYRWSLESICLVLLGTRL-GLLGESPPSEAQQFIDAIKKMFESSAQLMLMP--SLWRYF-PTKVWKDFVRAW  271 (519)
T ss_pred             -chhHHHHHHHHHHHHHHHHHHhccc-ccccCCCCHHHHHHHHHHHHHHHhHHHHHhcc--hHHHhC-CChHHHHHHHHH
Confidence             7899999999999999999999999 77655455566789999999887665543331  355555 456778899999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHH
Q 009347          270 RELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWIL  348 (537)
Q Consensus       270 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l  348 (537)
                      +.+.+++.++|+...++.+...... .+..+.+-.++...          ++ .+++...++++++||.|||++++.|+|
T Consensus       272 D~i~~~~~~~Id~~l~~l~~~~~~~-~~~~~~l~~~L~~~----------~l~~k~~~~~~~dll~aGvDTTs~tl~~~L  340 (519)
T KOG0159|consen  272 DQIFDVGDKYIDNALEELEKQDSAG-SEYTGSLLELLLRK----------ELSRKDAKANVMDLLAAGVDTTSNTLLWAL  340 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccc-cchhHHHHHHHHHc----------cCCHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence            9999999999999988766532111 11222333333221          23 688889999999999999999999999


Q ss_pred             HHHHhCHHHHHHHHHHHHHHhcC-CCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEe
Q 009347          349 SLLLNHRDVLKKAQNELDVHIGK-RRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYV  427 (537)
Q Consensus       349 ~~L~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~  427 (537)
                      |+|++||++|++|++|+.++.++ +..++.+++++||||+||||||+||||++|.. .|...+|.+++||.|||||.|.+
T Consensus       341 y~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l  419 (519)
T KOG0159|consen  341 YELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVL  419 (519)
T ss_pred             HHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEE
Confidence            99999999999999999999987 68899999999999999999999999999998 79999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCC
Q 009347          428 NVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPV  507 (537)
Q Consensus       428 ~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~  507 (537)
                      +++.+.+||+.|++|++|+||||++.+.   ...+++.++|||.|+|+|+|+++|.+|+.++|++|+++|+++...+.  
T Consensus       420 ~~~~~~r~~~~F~~p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~--  494 (519)
T KOG0159|consen  420 FLYVLGRNPAYFPDPEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE--  494 (519)
T ss_pred             eehhhccChhhCCCccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC--
Confidence            9999999999999999999999998763   23588999999999999999999999999999999999999987654  


Q ss_pred             CcccccceeeeecCceEEEEeccc
Q 009347          508 DMSEGMSLTLVKTTPVKVLITPRL  531 (537)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~r~  531 (537)
                      ++.....+++.|..++.+++++|+
T Consensus       495 pv~~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  495 PVEYVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             CccceeEEEEcCCCCcceeeeeCC
Confidence            455566778889999999999996


No 16 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.2e-73  Score=576.11  Aligned_cols=455  Identities=21%  Similarity=0.333  Sum_probs=354.4

Q ss_pred             CCCCCCCCCCCCCcceeeccccCC------------------CcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHH
Q 009347           36 KKKRGPPEAGGAWPVIGHLHLLGR------------------FPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKE   97 (537)
Q Consensus        36 ~~~~~~Pgp~~~~p~iG~~~~~~~------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~   97 (537)
                      .+.++|||| +++|++||+..+..                  ......+.+|+++||++|++++|+.++++++||+++++
T Consensus        39 ~~~~~~PGP-~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~  117 (516)
T PLN02290         39 MERQGVRGP-KPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKE  117 (516)
T ss_pred             HHHcCCCCC-CCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHH
Confidence            466789999 89999999877642                  11223568899999999999999999999999999999


Q ss_pred             HHHhCCccccCCCccch---hhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q 009347           98 CLTTHDRVFASRPKALV---AEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWE  174 (537)
Q Consensus        98 vl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~  174 (537)
                      ++.++. .+..++....   ....|   .+ ++..+|+.|+++|+.++ +.|+..+++.+.+.+.++++.+++.+.+.  
T Consensus       118 il~~~~-~~~~r~~~~~~~~~~~~g---~~-l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--  189 (516)
T PLN02290        118 LLTKYN-TVTGKSWLQQQGTKHFIG---RG-LLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKA--  189 (516)
T ss_pred             HHhcCC-CCCCCcchhhhHHHHHhc---CC-ccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence            999873 3444442211   11122   22 35668999999999998 88999999999999999999999999764  


Q ss_pred             hhcCCCCCCccCccccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccc
Q 009347          175 RTNNYKSSDHNNNKKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLR  254 (537)
Q Consensus       175 ~~~~~~~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~  254 (537)
                            ..   .+.. ++|+.++++.+++|++++++||.++ +.   .+     ++...+..+............+|++.
T Consensus       190 ------~~---~~~~-~vd~~~~~~~~~~~vi~~~~fG~~~-~~---~~-----~~~~~~~~~~~~~~~~~~~~~~p~~~  250 (516)
T PLN02290        190 ------VE---SGQT-EVEIGEYMTRLTADIISRTEFDSSY-EK---GK-----QIFHLLTVLQRLCAQATRHLCFPGSR  250 (516)
T ss_pred             ------Hh---cCCc-eEEhHHHHHHHHHHHHHHHHcCCcc-cc---ch-----HHHHHHHHHHHHHHHhhhhhcCchhh
Confidence                  11   2213 7899999999999999999999987 21   11     12222222222111111112345444


Q ss_pred             cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHH
Q 009347          255 WFDIGGDERAMKKNARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALI  333 (537)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~  333 (537)
                      +++ ....++.+...+.+.+++.+.|+++++..+.+..  ++...|+++.+++...+..  ..+..+ ++++.+++.+++
T Consensus       251 ~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~d~l~~ll~~~~~~~--~~~~~l~~~~i~~~~~~~~  325 (516)
T PLN02290        251 FFP-SKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRS--SSYGDDLLGMLLNEMEKKR--SNGFNLNLQLIMDECKTFF  325 (516)
T ss_pred             hCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC--CCCCCCHHHHHHHhccccC--CCCCCCCHHHHHHHHHHHH
Confidence            443 2233455666778889999999988775443211  1235799999997643221  112235 778999999999


Q ss_pred             HhhhhchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCc
Q 009347          334 LAASDTSKITLTWILSLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCT  413 (537)
Q Consensus       334 ~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~  413 (537)
                      +||+|||+++++|++++|++||++|+|+++|++++++++ .++++++++||||+|||+||||++|+++.. +|.+.+|++
T Consensus       326 ~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~-~R~~~~d~~  403 (516)
T PLN02290        326 FAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL-PRMAFEDIK  403 (516)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc-ceeecCCee
Confidence            999999999999999999999999999999999999874 789999999999999999999999999974 999999999


Q ss_pred             ccceeeCCCcEEEeccccccCCCCCC-CCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHH
Q 009347          414 VNDYFVPAGTVLYVNVWKIHRDPRVW-PEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLAT  492 (537)
Q Consensus       414 ~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~  492 (537)
                      ++||.||||+.|.++.+++||||++| +||++|+||||++.+     ......|+|||+|+|.|+|+++|++|++++++.
T Consensus       404 i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~-----~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~  478 (516)
T PLN02290        404 LGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP-----FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAM  478 (516)
T ss_pred             ECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC-----CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999 899999999999542     113457999999999999999999999999999


Q ss_pred             HHhhcceeCCCCCCCCcccccceeeeecCceEEEEecccc
Q 009347          493 LLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPRLS  532 (537)
Q Consensus       493 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  532 (537)
                      ||++|+++++++.+  .......++.|+.+++|++++|++
T Consensus       479 ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        479 LISKFSFTISDNYR--HAPVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             HHHhceEeeCCCcc--cCccceeeecCCCCCeEEEEeCCC
Confidence            99999999876532  112235678888999999999974


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2e-73  Score=564.04  Aligned_cols=456  Identities=27%  Similarity=0.442  Sum_probs=359.9

Q ss_pred             CCCCCCCCCCCCcceeeccccCCC--cHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCcc--
Q 009347           37 KKRGPPEAGGAWPVIGHLHLLGRF--PLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKA--  112 (537)
Q Consensus        37 ~~~~~Pgp~~~~p~iG~~~~~~~~--~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~--  112 (537)
                      ....|||| .++|++|++..+...  ....++.++..+||++|+.|+|+.++++++||+.+++|+.++.......+..  
T Consensus        33 ~~~~~~gp-~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~  111 (497)
T KOG0157|consen   33 KKKLPPGP-PGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPE  111 (497)
T ss_pred             HhccCCCC-CCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHH
Confidence            55688999 899999999988533  4677889999999999999999999999999999999997554433333222  


Q ss_pred             chhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCcccccc
Q 009347          113 LVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLV  192 (537)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~v  192 (537)
                      .+...+|.+   + ++.+|+.|+++||+++ +.|+...++.+...+.+....+...+...        .    .+ + .+
T Consensus       112 ~~~~~lG~g---l-l~~~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~--------~----~~-~-~v  172 (497)
T KOG0157|consen  112 SLKPWLGDG---L-LFSDGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELA--------A----SG-E-EV  172 (497)
T ss_pred             HHHHHhcCc---c-ccCCchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHh--------h----cC-C-eE
Confidence            334555542   3 5555999999999998 99999999999999999998887777664        1    33 3 39


Q ss_pred             chhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccc-ccccccCCCcHHHHHHHHHH
Q 009347          193 EMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLP-FLRWFDIGGDERAMKKNARE  271 (537)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~  271 (537)
                      |+.+.++++|+|+++.++||...  ..  .+.+....+.++++........   ....| +..++......++..++.+.
T Consensus       173 d~~~~~~~~tld~i~~~~~G~~~--~~--~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~  245 (497)
T KOG0157|consen  173 DLQDLLKRLTLDIICKTAMGPES--LD--AEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKI  245 (497)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCcc--cc--ccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHH
Confidence            99999999999999999999322  11  1111334555555544333222   22334 44434323367888899999


Q ss_pred             HHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHH
Q 009347          272 LDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSL  350 (537)
Q Consensus       272 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~  350 (537)
                      +++++.+.|+++++........+.....|+++.+....+        ..+ ++++.+++.+|++||+|||+++++|++++
T Consensus       246 ~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~--------~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~  317 (497)
T KOG0157|consen  246 LHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEED--------KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWL  317 (497)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhcc--------CCCCHHHHHHHHHHheeeccchHHHHHHHHHHH
Confidence            999999999999987654321111345677775222211        235 88999999999999999999999999999


Q ss_pred             HHhCHHHHHHHHHHHHHHhcCCCC-CCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcc-cceeeCCCcEEEec
Q 009347          351 LLNHRDVLKKAQNELDVHIGKRRQ-VNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTV-NDYFVPAGTVLYVN  428 (537)
Q Consensus       351 L~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~-~g~~ip~G~~v~~~  428 (537)
                      |++||++|+|+++|+.++++++.. ....+.++|+||++||+||||||||+|.. .|.+.+|+++ +||.||||+.|.++
T Consensus       318 La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~  396 (497)
T KOG0157|consen  318 LAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLIS  396 (497)
T ss_pred             HhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEe
Confidence            999999999999999999985433 23333336999999999999999999998 8999999999 58999999999999


Q ss_pred             cccccCCCCCCC-CCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCC
Q 009347          429 VWKIHRDPRVWP-EPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPV  507 (537)
Q Consensus       429 ~~~~~~d~~~~~-~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~  507 (537)
                      ++++|||+.+|+ ||++||||||+++....  ..++++|+|||+|+|.|+|++||++|+|++++++|++|++++..+.. 
T Consensus       397 ~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-  473 (497)
T KOG0157|consen  397 IYALHRDPRVWGEDPEEFDPERFLDGEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-  473 (497)
T ss_pred             hHHhccCccccCCChhhcCccccCCCCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-
Confidence            999999999997 99999999999764221  34679999999999999999999999999999999999999877643 


Q ss_pred             CcccccceeeeecCceEEEEecccc
Q 009347          508 DMSEGMSLTLVKTTPVKVLITPRLS  532 (537)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~r~~  532 (537)
                       .......+++++++++|++++|.+
T Consensus       474 -~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  474 -PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             -ceeeeEEEEEecCCeEEEEEeCCC
Confidence             445567889999999999999964


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2e-72  Score=563.03  Aligned_cols=440  Identities=17%  Similarity=0.231  Sum_probs=336.4

Q ss_pred             cCCCCCCCCCCCCCcceeeccccC----CCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCC
Q 009347           35 NKKKRGPPEAGGAWPVIGHLHLLG----RFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRP  110 (537)
Q Consensus        35 ~~~~~~~Pgp~~~~p~iG~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~  110 (537)
                      .++.+.|||| +++|++||+..+.    ...++.++.+++++||++|++++|+.++|+++||+++++|+.+++..|+.+.
T Consensus        34 ~~~~~~PPgp-~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         34 QKRFNLPPGN-MGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             cCCCCCCCCC-cCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            4556789999 7899999976432    1236778999999999999999999999999999999999998877675443


Q ss_pred             ccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHH-hHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccc
Q 009347          111 KALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEK-LKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKK  189 (537)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~  189 (537)
                      .......++.   ..++..+|+.|+++|++++ +.|++.+++. +.+.+.+.+..+++.+.               .+ .
T Consensus       113 ~~~~~~~~g~---~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~---------------~~-~  172 (490)
T PLN02500        113 PRSIGGILGK---WSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK---------------EN-S  172 (490)
T ss_pred             chHHHHHhCc---ccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC---------------CC-C
Confidence            3222223331   1234557999999999998 8899988876 45666666666665542               22 3


Q ss_pred             cccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHH
Q 009347          190 VLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNA  269 (537)
Q Consensus       190 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  269 (537)
                       .+|+.+.+..++++++++++||.+. +.    .  ....+...+..+......  ....+|..       ..++..+..
T Consensus       173 -~vd~~~~~~~~~~~vi~~~~fg~~~-~~----~--~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~  235 (490)
T PLN02500        173 -TFSAQDEAKKFTFNLMAKHIMSMDP-GE----E--ETEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSR  235 (490)
T ss_pred             -CEEehHHHHHHHHHHHHHHHhCCCC-Cc----h--HHHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHH
Confidence             6899999999999999999999875 11    1  122333333333221110  00112211       124455567


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHH
Q 009347          270 RELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWIL  348 (537)
Q Consensus       270 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l  348 (537)
                      +.+.+++.+.+++++++.+.+.  ......|+++.+++..          .+ ++++.+++.++++||+|||+++++|++
T Consensus       236 ~~~~~~~~~~i~~~~~~~~~~~--~~~~~~d~l~~ll~~~----------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l  303 (490)
T PLN02500        236 ATILKFIERKMEERIEKLKEED--ESVEEDDLLGWVLKHS----------NLSTEQILDLILSLLFAGHETSSVAIALAI  303 (490)
T ss_pred             HHHHHHHHHHHHHHHHhhhccc--CCCCcchHHHHHHhcc----------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            7888888899988876543221  0123568999988631          24 889999999999999999999999999


Q ss_pred             HHHHhCHHHHHHHHHHHHHHhc-----CCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCc
Q 009347          349 SLLLNHRDVLKKAQNELDVHIG-----KRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGT  423 (537)
Q Consensus       349 ~~L~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~  423 (537)
                      ++|++||++|+|+++|++++++     .+..++++++++||||+|||+||||++|+++.. +|.+.+|++++||.||||+
T Consensus       304 ~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt  382 (490)
T PLN02500        304 FFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGW  382 (490)
T ss_pred             HHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCC
Confidence            9999999999999999999874     234589999999999999999999999999986 7999999999999999999


Q ss_pred             EEEeccccccCCCCCCCCCCCCCCCCccCCCCCccc----cCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcce
Q 009347          424 VLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDV----RGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDF  499 (537)
Q Consensus       424 ~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~  499 (537)
                      .|.++.|++||||++|+||++|+||||++++.....    ...+..|+|||+|+|.|+|++||++|+++++++||++|+|
T Consensus       383 ~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~  462 (490)
T PLN02500        383 KVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNW  462 (490)
T ss_pred             EEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEE
Confidence            999999999999999999999999999965421110    1245789999999999999999999999999999999999


Q ss_pred             eCCCCCCCCcccccceeeeecCceEEEEec
Q 009347          500 ETPLDEPVDMSEGMSLTLVKTTPVKVLITP  529 (537)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  529 (537)
                      ++.++.+...  .. .+ .++.++.|++++
T Consensus       463 ~~~~~~~~~~--~~-~~-~~~~~l~~~~~~  488 (490)
T PLN02500        463 ELAEADQAFA--FP-FV-DFPKGLPIRVRR  488 (490)
T ss_pred             EEcCCCccee--cc-cc-cCCCCceEEEEe
Confidence            9876643211  11 22 335699998875


No 19 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.6e-70  Score=552.87  Aligned_cols=457  Identities=22%  Similarity=0.305  Sum_probs=337.8

Q ss_pred             CCCCCCCCCcceeeccccCCCcHhHHHHHHHHhh---CCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccc-hh
Q 009347           40 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKY---GPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKAL-VA  115 (537)
Q Consensus        40 ~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~-~~  115 (537)
                      .+||| +++|++||+..+...  +..+.+|.++|   |++|++++|+.++++++||+++++|+.++...|....... ..
T Consensus        31 ~~pgp-~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  107 (516)
T PLN03195         31 NRKGP-KSWPIIGAALEQLKN--YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM  107 (516)
T ss_pred             ccCCC-CCCCeecchHHHHhc--cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence            47888 789999998655333  34566777777   8999999999999999999999999987644454432211 11


Q ss_pred             -hhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHH-HHHHHHHHHHHHHHHhhhcCCCCCCccCccccccc
Q 009347          116 -EILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVR-EGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVE  193 (537)
Q Consensus       116 -~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vd  193 (537)
                       ...+   .+ +++.+|+.|+++||+++ +.|+..+++.+.+.+ .+.++.+++.+.+.        ..   .| . ++|
T Consensus       108 ~~~~g---~~-l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~--------~~---~~-~-~vd  169 (516)
T PLN03195        108 EVLLG---DG-IFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQA--------SF---AN-Q-VVD  169 (516)
T ss_pred             HHHhc---Ce-eeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------Hh---cC-C-eEc
Confidence             1122   22 46678999999999998 889999999998876 56667777777643        11   23 4 799


Q ss_pred             hhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHH
Q 009347          194 MNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELD  273 (537)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~  273 (537)
                      +.+++..+++|+++.++||.++ +......  ....+.+.++..........+ ..++.+.++......+...+..+.+.
T Consensus       170 ~~~~~~~~~~dvi~~~~fG~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~  245 (516)
T PLN03195        170 MQDLFMRMTLDSICKVGFGVEI-GTLSPSL--PENPFAQAFDTANIIVTLRFI-DPLWKLKKFLNIGSEALLSKSIKVVD  245 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCc-cccccCC--CccHHHHHHHHHHHHHHHHHh-cchhhHHHhcccchHHHHHHHHHHHH
Confidence            9999999999999999999988 3321111  112344444333221100000 01111111101112234455677788


Q ss_pred             HHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHH
Q 009347          274 VLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLL  352 (537)
Q Consensus       274 ~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~  352 (537)
                      +++.+.+++++++........+....|+++.+++...+.     +..+ ++++.++++++++||+|||+++++|++|+|+
T Consensus       246 ~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-----~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~  320 (516)
T PLN03195        246 DFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDP-----DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIM  320 (516)
T ss_pred             HHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCC-----CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHh
Confidence            888899988876543211001123568999999754321     2245 8899999999999999999999999999999


Q ss_pred             hCHHHHHHHHHHHHHHhcC--------------------CCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCC
Q 009347          353 NHRDVLKKAQNELDVHIGK--------------------RRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDC  412 (537)
Q Consensus       353 ~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~  412 (537)
                      +||++|+||++|+++++++                    ++.++++++++||||+|||+||||++|++|.. +|.+.+|.
T Consensus       321 ~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~  399 (516)
T PLN03195        321 MNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDD  399 (516)
T ss_pred             cCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCc
Confidence            9999999999999998743                    24578999999999999999999999999998 56666665


Q ss_pred             cc-cceeeCCCcEEEeccccccCCCCCC-CCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHH
Q 009347          413 TV-NDYFVPAGTVLYVNVWKIHRDPRVW-PEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTL  490 (537)
Q Consensus       413 ~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l  490 (537)
                      ++ +||.||||+.|.++.+++||||++| +||++|+||||++++.  .....+..|+|||+|+|.|+|++||++|+++++
T Consensus       400 ~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~l  477 (516)
T PLN03195        400 VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGV--FQNASPFKFTAFQAGPRICLGKDSAYLQMKMAL  477 (516)
T ss_pred             CcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCC--cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHH
Confidence            54 9999999999999999999999999 9999999999996431  011245679999999999999999999999999


Q ss_pred             HHHHhhcceeCCCCCCCCcccccceeeeecCceEEEEeccc
Q 009347          491 ATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPRL  531 (537)
Q Consensus       491 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  531 (537)
                      +.|+++|++++.++.+...  ....++.++.++.|++++|.
T Consensus       478 a~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        478 ALLCRFFKFQLVPGHPVKY--RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HHHHHhceeEecCCCccee--eeeeEEecCCCEEEEEEeCC
Confidence            9999999999876543322  33456778899999999884


No 20 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.3e-70  Score=544.97  Aligned_cols=455  Identities=19%  Similarity=0.294  Sum_probs=337.1

Q ss_pred             CCCCCCCCCCCcceeeccccCCC--cHhHHHHHHHHhhCCeeE---EecCCeeEEEecCHHHHHHHHHhCCccccCCCcc
Q 009347           38 KRGPPEAGGAWPVIGHLHLLGRF--PLHRVLGDMADKYGPIFT---IRMGVHRALVVSNWEMAKECLTTHDRVFASRPKA  112 (537)
Q Consensus        38 ~~~~Pgp~~~~p~iG~~~~~~~~--~~~~~~~~~~~kyG~v~~---~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~  112 (537)
                      .++.||| .++|++||+..+...  ..++.+.+...+||..++   +++|+.++++|+||+++++|+.++...|.+++..
T Consensus        30 ~~~~p~p-~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~  108 (500)
T PLN02169         30 PHGQPIL-KNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEF  108 (500)
T ss_pred             cCCCCCC-CCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHH
Confidence            3578888 789999998766322  234445555555887666   5788999999999999999999876666555322


Q ss_pred             c-hhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHh--HHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccc
Q 009347          113 L-VAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKL--KHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKK  189 (537)
Q Consensus       113 ~-~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~--~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~  189 (537)
                      . .....|    .++++.+|+.|+++|++++ +.|+...+..+  .+.+.+.++.+++.+.+.        ..   .| .
T Consensus       109 ~~~~~~~g----~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------~~---~~-~  171 (500)
T PLN02169        109 KKIFDVLG----EGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNA--------AH---EN-I  171 (500)
T ss_pred             HHHHHhhc----CcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------Hh---cC-C
Confidence            1 112222    2346667999999999998 99998877643  466777778888887654        11   23 3


Q ss_pred             cccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccccccc----ccCCCcHHHH
Q 009347          190 VLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW----FDIGGDERAM  265 (537)
Q Consensus       190 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~  265 (537)
                       ++|+.+.+.++++|++++++||.+. +.....+  ....+...+.......   ......|++.+    +......++.
T Consensus       172 -~vd~~~~~~~~t~dvi~~~~fG~~~-~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~  244 (500)
T PLN02169        172 -IIDLQDVFMRFMFDTSSILMTGYDP-MSLSIEM--LEVEFGEAADIGEEAI---YYRHFKPVILWRLQNWIGIGLERKM  244 (500)
T ss_pred             -eEeHHHHHHHHHHHHHHhheeCCCc-cccCCCC--CCCHHHHHHHHHHHHH---HhHHhccHHHHHHHHHhCCchhhHH
Confidence             7999999999999999999999977 3221111  1123444433322211   11112232111    1112345677


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHH
Q 009347          266 KKNARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITL  344 (537)
Q Consensus       266 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l  344 (537)
                      .+..+.+++++.+.|++++++..... ..++...|+++.+++...+.  ...+..+ ++++.+++.++++||+|||++++
T Consensus       245 ~~~~~~~~~~~~~~I~~r~~~~~~~~-~~~~~~~d~l~~ll~~~~~~--~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl  321 (500)
T PLN02169        245 RTALATVNRMFAKIISSRRKEEISRA-ETEPYSKDALTYYMNVDTSK--YKLLKPKKDKFIRDVIFSLVLAGRDTTSSAL  321 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccc-cccCCCcCHHHHHHhccccc--cccccCCChHHHHHHHHHHHHhchhHHHHHH
Confidence            78888999999999998876422110 00112478999998764211  0001124 77899999999999999999999


Q ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCC-CcccceeeCCCc
Q 009347          345 TWILSLLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTED-CTVNDYFVPAGT  423 (537)
Q Consensus       345 ~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d-~~~~g~~ip~G~  423 (537)
                      +|++|+|++||++|+|+++|+++++      +++++++||||+|||+||||++|++|.. .|.+.+| +.++||.||||+
T Consensus       322 ~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt  394 (500)
T PLN02169        322 TWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFN-HKAPAKPDVLPSGHKVDAES  394 (500)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcC-ceecCCCCCccCCEEECCCC
Confidence            9999999999999999999999863      6789999999999999999999999988 4655555 445999999999


Q ss_pred             EEEeccccccCCCCCC-CCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCC
Q 009347          424 VLYVNVWKIHRDPRVW-PEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETP  502 (537)
Q Consensus       424 ~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~  502 (537)
                      .|.+++|++||||++| |||++|+||||++++++.. ...+..|+|||+|+|.|+|++||++|++++++.||++|++++.
T Consensus       395 ~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~-~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~  473 (500)
T PLN02169        395 KIVICIYALGRMRSVWGEDALDFKPERWISDNGGLR-HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVI  473 (500)
T ss_pred             EEEEcHHHhhCCccccCCChhhcCccccCCCCCCcc-CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEc
Confidence            9999999999999999 8999999999997542211 1236789999999999999999999999999999999999997


Q ss_pred             CCCCCCcccccceeeeecCceEEEEecc
Q 009347          503 LDEPVDMSEGMSLTLVKTTPVKVLITPR  530 (537)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r  530 (537)
                      ++.++  ....++++.+++++.+++++|
T Consensus       474 ~~~~~--~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        474 EGHKI--EAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             CCCCc--ccccceEEecCCCEEEEEEeC
Confidence            65433  234457788899999999987


No 21 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=9.2e-70  Score=548.78  Aligned_cols=451  Identities=24%  Similarity=0.344  Sum_probs=339.5

Q ss_pred             eeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchhhhhccCCceeEeCCC
Q 009347           51 IGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPY  130 (537)
Q Consensus        51 iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (537)
                      +||+..+....++..+.+++++|||||++++|+.++++|+||+.+++||..+...|..++.........  .. .+++.+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~--g~-~l~~~d  218 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM--GK-GLIPAD  218 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc--CC-ceecCC
Confidence            455555555557889999999999999999999899999999999999998766666543321111111  12 345678


Q ss_pred             ChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhHHHHHHHHHHHHHhh
Q 009347          131 GPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNAILRVT  210 (537)
Q Consensus       131 g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~  210 (537)
                      |+.|+.+|+.++ +.|+...++.+.+.+.+.++.+++++.+.        ..   .| + ++|+.+.+..+++|+|+.++
T Consensus       219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~--------~~---~g-~-~vdl~~~~~~lt~DVI~~~~  284 (633)
T PLN02738        219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAA--------AS---DG-E-DVEMESLFSRLTLDIIGKAV  284 (633)
T ss_pred             cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHH--------hc---CC-C-cEeHHHHHHHHHHHHHHHHH
Confidence            999999999998 89999999999999999999999999764        21   23 4 79999999999999999999


Q ss_pred             hcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 009347          211 VGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELDVLAQGWLDEHKRKRESG  290 (537)
Q Consensus       211 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  290 (537)
                      ||.+++... +.+ +....+...+...............+|.+..+  ....++..+..+.+..+...+++.+++..+..
T Consensus       285 FG~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~  360 (633)
T PLN02738        285 FNYDFDSLS-NDT-GIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEE  360 (633)
T ss_pred             hCCCccccc-cch-HHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999883222 111 11122222222221110000111112222222  11234444555666666666666554322111


Q ss_pred             cc-----ccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHhCHHHHHHHHHH
Q 009347          291 QM-----INKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLNHRDVLKKAQNE  364 (537)
Q Consensus       291 ~~-----~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~E  364 (537)
                      ..     .......|+++.|++..         ..+ ++++.+++.++++||+|||+++++|++++|++||++|+|||+|
T Consensus       361 ~~~~~~~~~~~~~~dil~~Ll~~~---------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreE  431 (633)
T PLN02738        361 ELQFHEEYMNERDPSILHFLLASG---------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEE  431 (633)
T ss_pred             cccchhcccccccchHHHHHHHcC---------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            00     00123458999888642         124 7889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEeccccccCCCCCCCCCCC
Q 009347          365 LDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYK  444 (537)
Q Consensus       365 i~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  444 (537)
                      +++++++ ..++++++++||||+|||+|+||++|+++.. +|++.+|.+++||.||||+.|.++.|.+||||++||||++
T Consensus       432 l~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~  509 (633)
T PLN02738        432 VDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEK  509 (633)
T ss_pred             HHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccc
Confidence            9999884 6789999999999999999999999999986 6888999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCcccccceeeeecCceE
Q 009347          445 FKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVK  524 (537)
Q Consensus       445 F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (537)
                      |+||||+..............|+|||.|+|.|+|++||++|++++++.|+++|+|++.++.+ ++......++.++.++.
T Consensus       510 F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~  588 (633)
T PLN02738        510 FNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLK  588 (633)
T ss_pred             cCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcE
Confidence            99999985321111123456899999999999999999999999999999999999976632 23333356777889999


Q ss_pred             EEEecccccc
Q 009347          525 VLITPRLSAS  534 (537)
Q Consensus       525 ~~~~~r~~~~  534 (537)
                      +++++|....
T Consensus       589 v~l~~R~~~~  598 (633)
T PLN02738        589 MTVTRRTKPP  598 (633)
T ss_pred             EEEEECCCCC
Confidence            9999997654


No 22 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.2e-70  Score=543.82  Aligned_cols=430  Identities=18%  Similarity=0.261  Sum_probs=334.3

Q ss_pred             CCCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchh
Q 009347           36 KKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVA  115 (537)
Q Consensus        36 ~~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~  115 (537)
                      .+.+.|||| +++|++||+..+.++ ...++++++++||++|++++++.++++++||+++++++.++...|..+......
T Consensus        28 ~r~~~ppgp-~~~P~~G~~~~~~~~-~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~  105 (463)
T PLN02774         28 SKKGLPPGT-MGWPLFGETTEFLKQ-GPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSML  105 (463)
T ss_pred             CCCCCCCCC-CCCCchhhHHHHHHh-hHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHH
Confidence            334577888 789999998887655 567899999999999999999999999999999999998876665433222222


Q ss_pred             hhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHH-hHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccch
Q 009347          116 EILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEK-LKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEM  194 (537)
Q Consensus       116 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl  194 (537)
                      ..+|.   +.+++.+|+.|+.+|+.+. +.|++..++. +.+.+.+.++++++++.               .+ + ++|+
T Consensus       106 ~~lg~---~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~-~-~v~~  164 (463)
T PLN02774        106 DILGT---CNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD---------------GL-K-TIDI  164 (463)
T ss_pred             HHhCc---cchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC---------------CC-C-CEEe
Confidence            33332   2334568999999999997 8899998875 67777777777766542               22 3 6899


Q ss_pred             hHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHHH
Q 009347          195 NKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELDV  274 (537)
Q Consensus       195 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~  274 (537)
                      .+.+..+++++++.++||...      .+  ...++...+..+...  ..    .+|.  +++.. ..++..++.+.+.+
T Consensus       165 ~~~~~~~~~~~~~~~~~g~~~------~~--~~~~~~~~~~~~~~~--~~----~~~~--~lp~~-~~~~~~~~~~~~~~  227 (463)
T PLN02774        165 QEKTKEMALLSALKQIAGTLS------KP--ISEEFKTEFFKLVLG--TL----SLPI--DLPGT-NYRSGVQARKNIVR  227 (463)
T ss_pred             eHHHHHHHHHHHHHHHcCCCC------hH--HHHHHHHHHHHHhcc--cc----cCCc--CCCCh-hhhHHHHHHHHHHH
Confidence            999999999999999999764      11  112233332222211  11    1121  12111 13455567778888


Q ss_pred             HHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHh
Q 009347          275 LAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLN  353 (537)
Q Consensus       275 ~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~  353 (537)
                      ++.+.++++++..        ...+|+++.+++...+      +..+ ++++.+++.++++||+|||+++++|++++|++
T Consensus       228 ~~~~~i~~r~~~~--------~~~~d~l~~ll~~~~~------~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~  293 (463)
T PLN02774        228 MLRQLIQERRASG--------ETHTDMLGYLMRKEGN------RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHD  293 (463)
T ss_pred             HHHHHHHHHHhcC--------CCcccHHHHHHhCccC------CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHc
Confidence            8888888876531        2357999999873211      2235 88999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhcC---CCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEeccc
Q 009347          354 HRDVLKKAQNELDVHIGK---RRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVW  430 (537)
Q Consensus       354 ~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~  430 (537)
                      ||++|+|+++|++++.+.   +..++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+
T Consensus       294 ~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~  372 (463)
T PLN02774        294 HPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTR  372 (463)
T ss_pred             CHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehH
Confidence            999999999999999864   35689999999999999999999999999866 79999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCcc
Q 009347          431 KIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMS  510 (537)
Q Consensus       431 ~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~  510 (537)
                      .+||||++|+||++|+||||+.++.     .....++|||+|+|.|||++||++|++++++.||++|++++.++.++.. 
T Consensus       373 ~~~rdp~~~~dP~~F~PeRfl~~~~-----~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~-  446 (463)
T PLN02774        373 EINYDPFLYPDPMTFNPWRWLDKSL-----ESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK-  446 (463)
T ss_pred             HhcCCcccCCChhccCchhcCCCCc-----CCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc-
Confidence            9999999999999999999996531     1123699999999999999999999999999999999999976643211 


Q ss_pred             cccceeeeecCceEEEEec
Q 009347          511 EGMSLTLVKTTPVKVLITP  529 (537)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~  529 (537)
                       ..  ...++++++|+++|
T Consensus       447 -~~--~~~p~~g~~~~~~~  462 (463)
T PLN02774        447 -FP--RVEAPNGLHIRVSP  462 (463)
T ss_pred             -CC--CCCCCCCceEEeee
Confidence             11  23367899999874


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.9e-71  Score=557.43  Aligned_cols=455  Identities=31%  Similarity=0.535  Sum_probs=363.2

Q ss_pred             CCCCCCCCcceeeccccCC-CcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchhhh-h
Q 009347           41 PPEAGGAWPVIGHLHLLGR-FPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAEI-L  118 (537)
Q Consensus        41 ~Pgp~~~~p~iG~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~~-~  118 (537)
                      |||| +++|++||+..+.+ ..+++.+.+++++||+||++++++.++++|+||+++++|+.++...++.++....... .
T Consensus         1 Ppgp-~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~   79 (463)
T PF00067_consen    1 PPGP-PPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR   79 (463)
T ss_dssp             SSCS-SSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred             CcCC-CCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence            7888 89999999999873 5588999999999999999999999999999999999999998766766533222221 1


Q ss_pred             ccCCceeEeCCCChhHHHHHHHHHHhhcCHH-HHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhHH
Q 009347          119 GFNFSMFGFSPYGPHWRQIRKIATLELLSNH-RLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNKW  197 (537)
Q Consensus       119 ~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~~  197 (537)
                      .......++..+|+.|+.+|+.+. +.|+.. .+ .+.+.+++.++.+++.+.+.        ..   .+ . .+|+.++
T Consensus        80 ~~~~~~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~--------~~---~~-~-~vd~~~~  144 (463)
T PF00067_consen   80 GPFGGKGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKK--------AG---SS-G-PVDLFDW  144 (463)
T ss_dssp             HHHTTTSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHT--------TT---SE-S-EEEHHHH
T ss_pred             cccccccccccccccccccccccc-ccccccccc-cccccccccccccccccccc--------cc---cc-c-eeeeecc
Confidence            111112335667899999999998 788887 66 99999999999999999886        21   11 2 6999999


Q ss_pred             HHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccc--ccccccccccccccCCCcHHHHHHHHHHHHHH
Q 009347          198 FEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGK--FVVSDSLPFLRWFDIGGDERAMKKNARELDVL  275 (537)
Q Consensus       198 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  275 (537)
                      ++.+++|+++.++||.++ ++.  .+ .....+.+.+..+...+..  ..+...+|++.+++ ....+...+..+.+.++
T Consensus       145 ~~~~~~d~i~~~~fG~~~-~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~  219 (463)
T PF00067_consen  145 LRRFALDVIGRVLFGKDF-GSL--DD-EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKY  219 (463)
T ss_dssp             HHHHHHHHHHHHHHSSHH-HGT--TH-HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccee-eec--cc-ccccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence            999999999999999987 322  12 1234556666665543322  12333456555542 23456666677889999


Q ss_pred             HHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHh-hhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHh
Q 009347          276 AQGWLDEHKRKRESGQMINKEGHEDFMDVMLSIL-RDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLN  353 (537)
Q Consensus       276 ~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~  353 (537)
                      +.+.++++++....+    .....|+++.+++.. ..+    .+..+ ++++.++++.+++||+|||+.+++|++++|++
T Consensus       220 ~~~~i~~~~~~~~~~----~~~~~d~l~~ll~~~~~~~----~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~  291 (463)
T PF00067_consen  220 IKEIIEERREELDDG----DESRRDLLDSLLQASSDSD----GPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAK  291 (463)
T ss_dssp             HHHHHHHHHHSHHSS----SSSCSSHHHHHHHHHHTTT----TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccc----ccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence            999999998877653    236889999999987 222    11245 99999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEecccccc
Q 009347          354 HRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIH  433 (537)
Q Consensus       354 ~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~  433 (537)
                      ||++|++|++|++++.++++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|.++.+++|
T Consensus       292 ~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~  371 (463)
T PF00067_consen  292 NPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALH  371 (463)
T ss_dssp             SHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999997777899999999999999999999999999966689999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCccccc
Q 009347          434 RDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGM  513 (537)
Q Consensus       434 ~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  513 (537)
                      +||++|+||++|+||||+..+.  ........|+|||.|+|.|+|++||++|++++++.||++|||++.++.+.......
T Consensus       372 ~d~~~~~dp~~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~  449 (463)
T PF00067_consen  372 RDPEYFPDPDEFDPERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQ  449 (463)
T ss_dssp             TSTTTSSSTTS--TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECS
T ss_pred             cccccccccccccccccccccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCcccc
Confidence            9999999999999999998763  12346789999999999999999999999999999999999999766443332222


Q ss_pred             -ceeeeecCceEEEE
Q 009347          514 -SLTLVKTTPVKVLI  527 (537)
Q Consensus       514 -~~~~~~~~~~~~~~  527 (537)
                       +++. ++.++.|.+
T Consensus       450 ~~~~~-~~~~~~~~~  463 (463)
T PF00067_consen  450 NGFLL-PPKPLKVKF  463 (463)
T ss_dssp             CSSSE-EESSSEEEE
T ss_pred             CceEe-eCCCcEEeC
Confidence             3444 456766653


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.9e-69  Score=535.31  Aligned_cols=429  Identities=19%  Similarity=0.267  Sum_probs=338.5

Q ss_pred             ccCCCCCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccc
Q 009347           34 SNKKKRGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKAL  113 (537)
Q Consensus        34 ~~~~~~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~  113 (537)
                      ..++.+.|||| +++|++||+..+....++.++.+++++||++++++++++++++++||+++++|+.++...|.......
T Consensus        30 ~~~~~~~Ppgp-~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~  108 (463)
T PLN02196         30 SSTKLPLPPGT-MGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPAS  108 (463)
T ss_pred             CCCCCCCCCCC-CCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchH
Confidence            34566889998 78999999876544448899999999999999999999999999999999999998766563221111


Q ss_pred             hhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccc
Q 009347          114 VAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVE  193 (537)
Q Consensus       114 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vd  193 (537)
                      .....|  . ..++..+|+.|+++|+++. +.|++..++.+.+.+++.+.++++++.                + . .+|
T Consensus       109 ~~~~~g--~-~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~----------------~-~-~v~  166 (463)
T PLN02196        109 KERMLG--K-QAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE----------------G-T-QIN  166 (463)
T ss_pred             HHHHcC--c-ccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC----------------C-C-eEE
Confidence            111222  2 2345678999999999998 899999999999999999888877642                2 3 689


Q ss_pred             hhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHH
Q 009347          194 MNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELD  273 (537)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~  273 (537)
                      +.++++.+++++++.++||.+..      .  ....+.+....+....      ..+|+.  ++ ....++..++.+.+.
T Consensus       167 ~~~~~~~~~~~v~~~~~fG~~~~------~--~~~~~~~~~~~~~~~~------~~~~~~--~p-~~~~~~~~~a~~~~~  229 (463)
T PLN02196        167 TYQEMKTYTFNVALLSIFGKDEV------L--YREDLKRCYYILEKGY------NSMPIN--LP-GTLFHKSMKARKELA  229 (463)
T ss_pred             eHHHHHHHHHHHHHHHHcCCCCc------h--HHHHHHHHHHHHhcch------hccccc--CC-CccchHHHHHHHHHH
Confidence            99999999999999999998751      1  1112222222111110      112321  11 112245566777888


Q ss_pred             HHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHH
Q 009347          274 VLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLL  352 (537)
Q Consensus       274 ~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~  352 (537)
                      +++.+.++++++..        ....|+++.+++.         +..+ ++++.++++++++||+|||+++++|++++|+
T Consensus       230 ~~~~~~i~~~~~~~--------~~~~d~l~~ll~~---------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~  292 (463)
T PLN02196        230 QILAKILSKRRQNG--------SSHNDLLGSFMGD---------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLA  292 (463)
T ss_pred             HHHHHHHHHHhhcC--------CCcccHHHHHHhc---------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            88888888776531        2356899988852         1134 8899999999999999999999999999999


Q ss_pred             hCHHHHHHHHHHHHHHhcC---CCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEecc
Q 009347          353 NHRDVLKKAQNELDVHIGK---RRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNV  429 (537)
Q Consensus       353 ~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~  429 (537)
                      +||++|+++++|++++.+.   +..++++++++||||+|||+|+||++|+++.. .|.+.+|++++||.||||+.|+++.
T Consensus       293 ~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~  371 (463)
T PLN02196        293 ENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLF  371 (463)
T ss_pred             hCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeH
Confidence            9999999999999998864   35689999999999999999999999999987 6999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCc
Q 009347          430 WKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDM  509 (537)
Q Consensus       430 ~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  509 (537)
                      +++||||++|+||++|+||||+...       .+..++|||+|+|.|+|+++|++|++++++.|+++|+|+++++. .++
T Consensus       372 ~~~~rd~~~~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~  443 (463)
T PLN02196        372 RNIHHSADIFSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGI  443 (463)
T ss_pred             HHhcCCchhcCCcCccChhhhcCCC-------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-Cce
Confidence            9999999999999999999999532       45689999999999999999999999999999999999987642 223


Q ss_pred             ccccceeeeecCceEEEEecc
Q 009347          510 SEGMSLTLVKTTPVKVLITPR  530 (537)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~r  530 (537)
                      .  ...+..|+.++.|+++..
T Consensus       444 ~--~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        444 Q--YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             E--EcccccCCCCceEEEecC
Confidence            2  222455788988888753


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.2e-69  Score=533.51  Aligned_cols=438  Identities=18%  Similarity=0.246  Sum_probs=337.7

Q ss_pred             CCCCCCCCCCCCCcceeeccccC----CCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCc
Q 009347           36 KKKRGPPEAGGAWPVIGHLHLLG----RFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPK  111 (537)
Q Consensus        36 ~~~~~~Pgp~~~~p~iG~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~  111 (537)
                      ++.+.|||| .++|++||+..+.    ...++.++.+++++||+||++++|+.++++++||+++++++.+++..|+.++.
T Consensus         4 ~~~~~Ppg~-~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          4 KKSRLPKGS-LGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCC-CCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            445678888 7899999988763    22378899999999999999999999999999999999999988777765533


Q ss_pred             cchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHh-HHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCcccc
Q 009347          112 ALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKL-KHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKV  190 (537)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~  190 (537)
                      ......+|.   ..++..+|+.|+++|+++. +.|+...+... .+.+.+.++.+++.+.               .+ . 
T Consensus        83 ~~~~~l~g~---~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------~~-~-  141 (452)
T PLN03141         83 KSLTELMGK---SSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR---------------DD-P-  141 (452)
T ss_pred             hhHHHHhCc---ccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc---------------CC-C-
Confidence            222233332   2345667999999999998 77877766552 4444444444443321               22 3 


Q ss_pred             ccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHH
Q 009347          191 LVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNAR  270 (537)
Q Consensus       191 ~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~  270 (537)
                      .+|+.+.+..++++++++++||.+.      .+  ....+...+..+.....      .+|+  +++.+ ...+..++.+
T Consensus       142 ~~~~~~~~~~~~~~vi~~~~~G~~~------~~--~~~~~~~~~~~~~~~~~------~~~~--~~p~~-~~~~~~~~~~  204 (452)
T PLN03141        142 PVLVQDETKKIAFEVLVKALISLEP------GE--EMEFLKKEFQEFIKGLM------SLPI--KLPGT-RLYRSLQAKK  204 (452)
T ss_pred             CEEhHHHHHHHHHHHHHHHHcCCCc------hH--HHHHHHHHHHHHhhhHH------hCcc--CCCch-HhHHHHHHHH
Confidence            7899999999999999999999865      11  22233333333322111      1221  11111 1234456678


Q ss_pred             HHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHH
Q 009347          271 ELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILS  349 (537)
Q Consensus       271 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~  349 (537)
                      .+.+++.+.|+++++..+.+.........|+++.+++...        ..+ ++++..+++++++||+|||+++++|+++
T Consensus       205 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--------~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~  276 (452)
T PLN03141        205 RMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGS--------DELTDDLISDNMIDMMIPGEDSVPVLMTLAVK  276 (452)
T ss_pred             HHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcCC--------CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence            8899999999988776433110000124689998886431        234 8899999999999999999999999999


Q ss_pred             HHHhCHHHHHHHHHHHHHHhc----CCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEE
Q 009347          350 LLLNHRDVLKKAQNELDVHIG----KRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVL  425 (537)
Q Consensus       350 ~L~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v  425 (537)
                      +|++||++|+++++|++++.+    .+..++.+++.+||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|
T Consensus       277 ~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V  355 (452)
T PLN03141        277 FLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCV  355 (452)
T ss_pred             HHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEE
Confidence            999999999999999998864    234578999999999999999999999999865 899999999999999999999


Q ss_pred             EeccccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCC
Q 009347          426 YVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDE  505 (537)
Q Consensus       426 ~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~  505 (537)
                      +++.+++||||++|+||++|+||||++++      ..+..|+|||+|+|.|+|++||++|++++++.|+++|+++++++.
T Consensus       356 ~~~~~~~~~d~~~~~dP~~F~PeRfl~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~  429 (452)
T PLN03141        356 LAYFRSVHLDEENYDNPYQFNPWRWQEKD------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT  429 (452)
T ss_pred             EEehHhccCCchhcCCccccCcccccCCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC
Confidence            99999999999999999999999999753      235689999999999999999999999999999999999987653


Q ss_pred             CCCcccccceeeeecCceEEEEecccc
Q 009347          506 PVDMSEGMSLTLVKTTPVKVLITPRLS  532 (537)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~r~~  532 (537)
                      .. .    ..++.+..++.|++++|++
T Consensus       430 ~~-~----~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        430 IV-N----FPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             ee-e----cccccCCCCceEEEEeCCC
Confidence            22 1    2367788999999999964


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=7e-68  Score=533.02  Aligned_cols=441  Identities=22%  Similarity=0.313  Sum_probs=343.1

Q ss_pred             ccCCCCCCCCCCCCCcceeeccccC----CCcHhHHHHHHHHhhCC--eeEEecCCeeEEEecCHHHHHHHHHhCCcccc
Q 009347           34 SNKKKRGPPEAGGAWPVIGHLHLLG----RFPLHRVLGDMADKYGP--IFTIRMGVHRALVVSNWEMAKECLTTHDRVFA  107 (537)
Q Consensus        34 ~~~~~~~~Pgp~~~~p~iG~~~~~~----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~  107 (537)
                      ...+.+.|||| +++|++|++..+.    ...+++++.+++++||+  +|++++++.++++++||+++++|+.++ ..|.
T Consensus        37 ~~~~~~lpPgp-~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~  114 (490)
T PLN02302         37 GEGQPPLPPGD-LGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFE  114 (490)
T ss_pred             ccCCCCCcCCC-CCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Cccc
Confidence            33455678998 8999999987662    22378899999999997  799999999999999999999999876 4454


Q ss_pred             CCCccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhc-CHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccC
Q 009347          108 SRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELL-SNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNN  186 (537)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  186 (537)
                      .+.........|.   ..++..+|+.|+++|+.+. +.| +++.++.+.+.+.+.+.++++.+..              .
T Consensus       115 ~~~~~~~~~~~g~---~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--------------~  176 (490)
T PLN02302        115 PGWPESTVELIGR---KSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK--------------M  176 (490)
T ss_pred             cCCchhHHHHhcc---ccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC--------------C
Confidence            4332222223332   2234567999999999998 677 5788999999999999988887632              3


Q ss_pred             ccccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHH
Q 009347          187 NKKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMK  266 (537)
Q Consensus       187 g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~  266 (537)
                      +   .+|+.++++.++++++++++||.+. +     .  ....+...+..+......  +...+|..       ..++..
T Consensus       177 ~---~v~~~~~~~~~~~~vi~~~~~G~~~-~-----~--~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~  236 (490)
T PLN02302        177 G---EIEFLTELRKLTFKIIMYIFLSSES-E-----L--VMEALEREYTTLNYGVRA--MAINLPGF-------AYHRAL  236 (490)
T ss_pred             C---CEehHHHHHHHHHHHHHHHHcCCCC-h-----H--HHHHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHH
Confidence            3   6899999999999999999999876 1     1  112222222222111100  01112211       123444


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHH
Q 009347          267 KNARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLT  345 (537)
Q Consensus       267 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~  345 (537)
                      +..+.+.+++.+.++++++....+.   .....|+++.|++...++     +..+ ++++.+++..+++||+|||+++++
T Consensus       237 ~~~~~l~~~~~~~i~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~-----~~~~~~~~i~~~~~~~~~Ag~dtta~~l~  308 (490)
T PLN02302        237 KARKKLVALFQSIVDERRNSRKQNI---SPRKKDMLDLLLDAEDEN-----GRKLDDEEIIDLLLMYLNAGHESSGHLTM  308 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccC---CCCcCCHHHHHHhhhccC-----CCCCCHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            5667788888888888876543211   124679999999865432     3345 889999999999999999999999


Q ss_pred             HHHHHHHhCHHHHHHHHHHHHHHhcCC----CCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCC
Q 009347          346 WILSLLLNHRDVLKKAQNELDVHIGKR----RQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPA  421 (537)
Q Consensus       346 ~~l~~L~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~  421 (537)
                      |++++|++||++|+|+++|++++.++.    ..++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.|||
T Consensus       309 ~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~  387 (490)
T PLN02302        309 WATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPK  387 (490)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECC
Confidence            999999999999999999999998642    2378999999999999999999999999986 79999999999999999


Q ss_pred             CcEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeC
Q 009347          422 GTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFET  501 (537)
Q Consensus       422 G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~  501 (537)
                      |+.|.++.+.+||||++|+||++|+||||++..      ..+..++|||+|+|.|+|+++|.+|++++++.|+++|++++
T Consensus       388 Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  461 (490)
T PLN02302        388 GWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLER  461 (490)
T ss_pred             CCEEEeeHHHhcCCcccCCCccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEE
Confidence            999999999999999999999999999999643      24568999999999999999999999999999999999998


Q ss_pred             CCCCCCCcccccceeeeecCceEEEEecccc
Q 009347          502 PLDEPVDMSEGMSLTLVKTTPVKVLITPRLS  532 (537)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  532 (537)
                      .++.. ++..  .....|..++.+++++|.+
T Consensus       462 ~~~~~-~~~~--~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        462 LNPGC-KVMY--LPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             cCCCC-ccee--CCCCCCCCCceEEEEeccC
Confidence            75421 2221  1236678899999999976


No 27 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.2e-68  Score=479.93  Aligned_cols=443  Identities=20%  Similarity=0.292  Sum_probs=343.9

Q ss_pred             CCCCCCCCCCcceeeccccCCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCcc--chhh
Q 009347           39 RGPPEAGGAWPVIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKA--LVAE  116 (537)
Q Consensus        39 ~~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~--~~~~  116 (537)
                      ..||....++||+|+...++.+ +.+++++.++|||+||++.++|+.+.++.+|+....+++++...++.....  ....
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~-P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKD-PLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHhccC-HHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            5889888899999999999998 999999999999999999999999999999999999999874444322211  1223


Q ss_pred             hhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHH-HHHHHhhhcCCCCCCccCcccccc-ch
Q 009347          117 ILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKE-LYDFWERTNNYKSSDHNNNKKVLV-EM  194 (537)
Q Consensus       117 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~~~~~~~g~~~~v-dl  194 (537)
                      .+|.   +..........-.+.+.+. ..+....++++.+.|.+++.+.++. +.+              .  + .+ .+
T Consensus       110 vFg~---~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~--------------s--~-~~d~l  168 (486)
T KOG0684|consen  110 VFGK---GVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE--------------S--G-ETDGL  168 (486)
T ss_pred             hcCC---CccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc--------------c--c-chhHh
Confidence            3332   2344555666677777776 7899999999999999998888776 211              2  3 44 44


Q ss_pred             hHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHHH
Q 009347          195 NKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELDV  274 (537)
Q Consensus       195 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~  274 (537)
                      ......+++.+.-..++|+.. ...       +.+....+.++...+..  +...||.  ++|... .++..++.+.+.+
T Consensus       169 ~~~~~~ii~tAs~~ll~~e~r-~~~-------d~~~a~l~~dLd~~F~~--~d~~FP~--~LP~~~-~r~~~ra~~~i~k  235 (486)
T KOG0684|consen  169 YTFCRLIIFTASRLLLGGEVR-DQL-------DADVAKLYHDLDQGFQP--FDFLFPY--NLPIPL-LRRRDRARKKISK  235 (486)
T ss_pred             hhhhHHHhhhhHHHhhhhhhh-hhh-------cchHHHHHHHHhccccc--hHhhccc--CCCcch-hhhHHHHHHHHHH
Confidence            455555555555555555544 221       12333333333333222  2224453  333222 2444478888888


Q ss_pred             HHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHh
Q 009347          275 LAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLN  353 (537)
Q Consensus       275 ~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~  353 (537)
                      +..+.+.++++..+       ...+|+++.+++ ...+     |... ++++.+.++.++|||+.||+.+.+|++++|++
T Consensus       236 ~f~~~i~~rr~s~s-------~~~~dmlq~l~~-~y~d-----g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~  302 (486)
T KOG0684|consen  236 IFSKIILDRRASIS-------KWDNDMLQSLME-KYKD-----GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLR  302 (486)
T ss_pred             HHHHHHHHHHhccc-------cccHHHHHHHHH-Hhhc-----CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhh
Confidence            89998888888653       256789999988 3332     4455 89999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhcCCCC-CCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccc----eeeCCCcEEEec
Q 009347          354 HRDVLKKAQNELDVHIGKRRQ-VNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVND----YFVPAGTVLYVN  428 (537)
Q Consensus       354 ~p~~~~~l~~Ei~~~~~~~~~-~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g----~~ip~G~~v~~~  428 (537)
                      |||+++.+++|+++++|++.. .+++.+++||+|++||+|||||+||.+.. .|.+.+|.++.+    |.||+|..|.++
T Consensus       303 ~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~vals  381 (486)
T KOG0684|consen  303 HPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALS  381 (486)
T ss_pred             CHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhhccceeeccCCcceecCCCCEEEec
Confidence            999999999999999988655 99999999999999999999999988876 799999998865    999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCccCCCCCccccCCc--ccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCC
Q 009347          429 VWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQN--FELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEP  506 (537)
Q Consensus       429 ~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~--~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~  506 (537)
                      ++.+|+||++||||+.|+|+||++++++.+..+..  ..+||||+|+|.|||+.||.+|++.++..+|++||+++.++..
T Consensus       382 P~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~  461 (486)
T KOG0684|consen  382 PFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPF  461 (486)
T ss_pred             cccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCC
Confidence            99999999999999999999999887555333433  4569999999999999999999999999999999999998732


Q ss_pred             CCcccccceeeeecCceEEEEeccc
Q 009347          507 VDMSEGMSLTLVKTTPVKVLITPRL  531 (537)
Q Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~r~  531 (537)
                      ++++. ..+++-|.++++++.+.|+
T Consensus       462 P~~d~-s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  462 PEVDY-SRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCCCH-HHhhcCCCCCceEEEeecC
Confidence            33333 3447778899999999886


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=5.4e-67  Score=516.75  Aligned_cols=456  Identities=16%  Similarity=0.220  Sum_probs=344.8

Q ss_pred             HHHHHHHHHHHHHhcccccccCCCCCCCCCCCCCcceeeccccC----CCcHhHHHHHHHHhhCCeeEEecCCeeEEEec
Q 009347           15 LTLIIFLYTLLLFVSRNYASNKKKRGPPEAGGAWPVIGHLHLLG----RFPLHRVLGDMADKYGPIFTIRMGVHRALVVS   90 (537)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~~p~iG~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~   90 (537)
                      +++++++++..+++.+..  ..+.+.|||| .++|++||+..+.    ...++.++.+++++||++++++++++++++|+
T Consensus         8 ~~~~~~~~~~~~~~~~~~--~~~~~lppgp-~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~   84 (472)
T PLN02987          8 LLLSSLAAIFFLLLRRTR--YRRMRLPPGS-LGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSA   84 (472)
T ss_pred             HHHHHHHHHHHHHHHhhc--cCCCCCcCCC-cCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEe
Confidence            344444445555555543  3333568888 8899999987762    13377889999999999999999999999999


Q ss_pred             CHHHHHHHHHhCCccccCCCccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHH
Q 009347           91 NWEMAKECLTTHDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELY  170 (537)
Q Consensus        91 d~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~  170 (537)
                      ||+++++++.++...|..++.......+|.  .++ +..+|+.|+++|+++. +.++...++.+.   ...+.++++...
T Consensus        85 ~pe~~~~il~~~~~~f~~~~~~~~~~~lg~--~~l-~~~~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~  157 (472)
T PLN02987         85 DPETNRFILQNEGKLFECSYPGSISNLLGK--HSL-LLMKGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNL  157 (472)
T ss_pred             CHHHHHHHHhCCCceEEecCcHHHHHHhCc--ccc-cccCcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHH
Confidence            999999999988777755543333344432  233 4557999999999986 555554544432   223344443332


Q ss_pred             HHHhhhcCCCCCCccCccccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccc
Q 009347          171 DFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSL  250 (537)
Q Consensus       171 ~~~~~~~~~~~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (537)
                      +.|            .  + ++|+.+.+.+++++++++++||.+.      ++  ....+.+.+.......    ....+
T Consensus       158 ~~~------------~--~-~v~~~~~~~~~t~~vi~~~~fg~~~------~~--~~~~~~~~~~~~~~~~----~~~~~  210 (472)
T PLN02987        158 DSW------------S--S-RVLLMEEAKKITFELTVKQLMSFDP------GE--WTESLRKEYVLVIEGF----FSVPL  210 (472)
T ss_pred             Hhh------------c--c-ceehHHHHHHHHHHHHHHHHcCCCC------hH--HHHHHHHHHHHHHhhh----hcCCC
Confidence            221            2  2 6899999999999999999999865      11  1112222222221111    12234


Q ss_pred             cccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHH
Q 009347          251 PFLRWFDIGGDERAMKKNARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATC  329 (537)
Q Consensus       251 P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~  329 (537)
                      |++.     ...++..+..+.+.+++.+.++++++....+    .....|+++.|++...         .+ ++++.+++
T Consensus       211 p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~~~d~l~~ll~~~~---------~~~~~ei~~~~  272 (472)
T PLN02987        211 PLFS-----TTYRRAIQARTKVAEALTLVVMKRRKEEEEG----AEKKKDMLAALLASDD---------GFSDEEIVDFL  272 (472)
T ss_pred             cCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhhhcc----CcccccHHHHHHhcCC---------CCCHHHHHHHH
Confidence            4431     2346677788899999999999987754331    1235799999996421         24 88999999


Q ss_pred             HHHHHhhhhchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcC---CCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcc
Q 009347          330 LALILAASDTSKITLTWILSLLLNHRDVLKKAQNELDVHIGK---RRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPH  406 (537)
Q Consensus       330 ~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r  406 (537)
                      +++++||+|||+++++|++++|++||++|+++++|++++.+.   +..++++++++|||++||++|+||++|+++.. +|
T Consensus       273 ~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R  351 (472)
T PLN02987        273 VALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FR  351 (472)
T ss_pred             HHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cc
Confidence            999999999999999999999999999999999999998752   34578999999999999999999999999865 79


Q ss_pred             cccCCCcccceeeCCCcEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHH
Q 009347          407 ASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVT  486 (537)
Q Consensus       407 ~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~  486 (537)
                      .+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||++.+..   ......++|||+|+|.|+|++||++|+
T Consensus       352 ~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~  428 (472)
T PLN02987        352 RAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVAL  428 (472)
T ss_pred             cCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999965321   123467999999999999999999999


Q ss_pred             HHHHHHHHhhcceeCCCCCCCCcccccceeeeecCceEEEEeccccc
Q 009347          487 HLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPRLSA  533 (537)
Q Consensus       487 ~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  533 (537)
                      +++++.|+++|+++++++..+..    ..++.|..++.+++++|+-+
T Consensus       429 ~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~~~~~~~~~~r~~~  471 (472)
T PLN02987        429 SVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQKRYPINVKRRDVA  471 (472)
T ss_pred             HHHHHHHHhceEEEECCCCceee----cccccCCCCceEEEEecccC
Confidence            99999999999999976643222    23677888999999999644


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=8.9e-67  Score=520.58  Aligned_cols=450  Identities=25%  Similarity=0.345  Sum_probs=345.4

Q ss_pred             CCCcceeecccc----CCCcHhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccchhh-hhcc
Q 009347           46 GAWPVIGHLHLL----GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKALVAE-ILGF  120 (537)
Q Consensus        46 ~~~p~iG~~~~~----~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~-~~~~  120 (537)
                      .+||.+|....+    ....++..+.+|+++||++|++++|+.++++++||+++++|+++.+..|..++...... ..+ 
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~~~-   96 (489)
T PLN02936         18 SGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFLFG-   96 (489)
T ss_pred             CCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHHhc-
Confidence            799999986665    23347889999999999999999999999999999999999988766676554322211 122 


Q ss_pred             CCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHH-HHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhHHHH
Q 009347          121 NFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKH-VREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNKWFE  199 (537)
Q Consensus       121 ~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~~~~  199 (537)
                         ..++..+|+.|+++||+++ +.|+...++.+.+ ++.+.++.+++.+.+.        ..   .| . ++|+.++++
T Consensus        97 ---~~i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~--------~~---~g-~-~vd~~~~~~  159 (489)
T PLN02936         97 ---SGFAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPV--------AL---SG-E-AVNMEAKFS  159 (489)
T ss_pred             ---CccccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHH--------hc---CC-C-ceeHHHHHH
Confidence               2335577999999999998 8999888887754 7788889999998765        21   23 4 799999999


Q ss_pred             HHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccccccc--c-cCCCcHHHHHHHHHHHHHHH
Q 009347          200 DVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRW--F-DIGGDERAMKKNARELDVLA  276 (537)
Q Consensus       200 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~-~~~~~~~~~~~~~~~~~~~~  276 (537)
                      .+++++++.++||.++ +... .+    .++.+.+...+..... .....+|++.+  + ......++..++.+.+.+++
T Consensus       160 ~~~~dvi~~~~fG~~~-~~~~-~~----~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~  232 (489)
T PLN02936        160 QLTLDVIGLSVFNYNF-DSLT-TD----SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETV  232 (489)
T ss_pred             HHHHHHHHHHHcCCCc-cccc-cC----cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHH
Confidence            9999999999999998 3321 11    1233333332221111 11123343211  0 01112455667778888888


Q ss_pred             HHHHHHHHHhhhcCcccc------CCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHH
Q 009347          277 QGWLDEHKRKRESGQMIN------KEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILS  349 (537)
Q Consensus       277 ~~~i~~~~~~~~~~~~~~------~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~  349 (537)
                      .+.++++++..+......      .+...|+++.|++...         .+ ++++.+++.++++||+|||+++++|++|
T Consensus       233 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~---------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~  303 (489)
T PLN02936        233 EDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE---------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLY  303 (489)
T ss_pred             HHHHHHHHHHHhhcccccccccccccCchHHHHHHHhccc---------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            888888776433211100      1234678888886421         24 8899999999999999999999999999


Q ss_pred             HHHhCHHHHHHHHHHHHHHhcCCCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEecc
Q 009347          350 LLLNHRDVLKKAQNELDVHIGKRRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNV  429 (537)
Q Consensus       350 ~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~  429 (537)
                      +|++||++|++|++|++++++. ..++++++++||||+|||+||||++|+++...+|.+.+|+.++||.||||+.|+++.
T Consensus       304 ~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~  382 (489)
T PLN02936        304 LLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISV  382 (489)
T ss_pred             HHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecH
Confidence            9999999999999999999875 457899999999999999999999999998877777788888999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCc
Q 009347          430 WKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDM  509 (537)
Q Consensus       430 ~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  509 (537)
                      +.+||||++||||++|+||||+.++...........++|||.|+|.|||++||++|++++++.|+++|+++++++.++..
T Consensus       383 ~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~  462 (489)
T PLN02936        383 YNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM  462 (489)
T ss_pred             HhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce
Confidence            99999999999999999999996542111112346899999999999999999999999999999999999987654332


Q ss_pred             ccccceeeeecCceEEEEecccc
Q 009347          510 SEGMSLTLVKTTPVKVLITPRLS  532 (537)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~r~~  532 (537)
                        ..+++..++.++.|++++|..
T Consensus       463 --~~~~~~~~~~~~~v~~~~R~~  483 (489)
T PLN02936        463 --TTGATIHTTNGLYMTVSRRRV  483 (489)
T ss_pred             --ecceEEeeCCCeEEEEEeeeC
Confidence              234566678899999999864


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.2e-65  Score=511.21  Aligned_cols=440  Identities=20%  Similarity=0.264  Sum_probs=332.5

Q ss_pred             CcceeeccccCCCcHhHHHHHHHHhhC-CeeEEecCCeeEEEecCHHHHHHHHHhCCccccCCCccc--hhhhhccCCce
Q 009347           48 WPVIGHLHLLGRFPLHRVLGDMADKYG-PIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASRPKAL--VAEILGFNFSM  124 (537)
Q Consensus        48 ~p~iG~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~~~~~--~~~~~~~~~~~  124 (537)
                      .++.|+......+ .++.+.++.++++ .+++++.++.  ++++||+.+++|+.++...|.+.....  .....|   . 
T Consensus        49 ~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g---~-  121 (502)
T PLN02426         49 AYLTASWAKDFDN-LCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG---R-  121 (502)
T ss_pred             CCccHHHHHhccc-HHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC---C-
Confidence            4577776654334 5677777888886 6888876554  899999999999998766665443221  112222   2 


Q ss_pred             eEeCCCChhHHHHHHHHHHhhcCHHHHHHhH--HHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhHHHHHHH
Q 009347          125 FGFSPYGPHWRQIRKIATLELLSNHRLEKLK--HVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNKWFEDVT  202 (537)
Q Consensus       125 ~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~~~~~~~  202 (537)
                      ++++.+|+.|+++||.++ +.|+...++.+.  +.+++..+.+++.+.+.        .+ .+.| . ++|+.+++++++
T Consensus       122 gi~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~--------~~-~~~~-~-~vd~~~~~~~~t  189 (502)
T PLN02426        122 GIFNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSA--------AD-DGEG-A-VLDLQDVFRRFS  189 (502)
T ss_pred             ceeecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------hh-cCCC-c-eEcHHHHHHHHH
Confidence            346678999999999998 899998888763  67777777788777654        11 0012 3 799999999999


Q ss_pred             HHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhccccccccccccccc----cccCCCcHHHHHHHHHHHHHHHHH
Q 009347          203 LNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLR----WFDIGGDERAMKKNARELDVLAQG  278 (537)
Q Consensus       203 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~~~~~~~~  278 (537)
                      +|+++.++||.++ +......  ...++.+.++........ .....+|++.    +++ .+..++..+..+.+.+++.+
T Consensus       190 ~dvi~~~~fG~~~-~~l~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~  264 (502)
T PLN02426        190 FDNICKFSFGLDP-GCLELSL--PISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAE  264 (502)
T ss_pred             HHHHHHHHhCCCC-cccCCCC--CccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHH
Confidence            9999999999988 4332111  123455554443321111 0111223221    222 12345667788889999999


Q ss_pred             HHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCchhhHHHHHHHHHHhhhhchHHHHHHHHHHHHhCHHHH
Q 009347          279 WLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDADTINKATCLALILAASDTSKITLTWILSLLLNHRDVL  358 (537)
Q Consensus       279 ~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~  358 (537)
                      .|+++++...       +...|+++.+++...          .++++.+++.++++||+|||+++++|++|+|++||++|
T Consensus       265 ~I~~r~~~~~-------~~~~dll~~ll~~~~----------~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~  327 (502)
T PLN02426        265 VIRQRRKLGF-------SASKDLLSRFMASIN----------DDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVA  327 (502)
T ss_pred             HHHHHHhccc-------CCcchHHHHHHhcCC----------CHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHH
Confidence            9998876421       235799999986432          15778899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCC-CCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcc-cceeeCCCcEEEeccccccCCC
Q 009347          359 KKAQNELDVHIGKR-RQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTV-NDYFVPAGTVLYVNVWKIHRDP  436 (537)
Q Consensus       359 ~~l~~Ei~~~~~~~-~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~  436 (537)
                      +||++|++++.+++ ..++++++++||||+|||+|+||++|++|.. .|.+.+|.++ +||.||||+.|.++.+++||||
T Consensus       328 ~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~  406 (502)
T PLN02426        328 SAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRME  406 (502)
T ss_pred             HHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCc
Confidence            99999999998753 3689999999999999999999999999987 6888888777 9999999999999999999999


Q ss_pred             CCC-CCCCCCCCCCccCCCCCccccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCcccccce
Q 009347          437 RVW-PEPYKFKPERFLTTHKHIDVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSL  515 (537)
Q Consensus       437 ~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  515 (537)
                      ++| |||++|+||||+++..  ........++|||+|+|.|+|+++|++|++++++.|+++|++++.++.........++
T Consensus       407 ~~~G~dp~~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  484 (502)
T PLN02426        407 RIWGPDCLEFKPERWLKNGV--FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGL  484 (502)
T ss_pred             cccCcChhhcCccccCCCCC--cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCccccee
Confidence            999 9999999999986421  1122456799999999999999999999999999999999999864322112223457


Q ss_pred             eeeecCceEEEEeccc
Q 009347          516 TLVKTTPVKVLITPRL  531 (537)
Q Consensus       516 ~~~~~~~~~~~~~~r~  531 (537)
                      ++.+++++.|++++|.
T Consensus       485 ~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        485 TATVRGGLPVRVRERV  500 (502)
T ss_pred             EEecCCCEEEEEEEcc
Confidence            7888899999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=6.4e-57  Score=441.19  Aligned_cols=408  Identities=17%  Similarity=0.225  Sum_probs=290.0

Q ss_pred             CCCCCCCCCCCCcceeeccccCC----CcHhHHHHHHHHhhCC-eeEEecCCeeE-------EEecCHHHHHHHHHh---
Q 009347           37 KKRGPPEAGGAWPVIGHLHLLGR----FPLHRVLGDMADKYGP-IFTIRMGVHRA-------LVVSNWEMAKECLTT---  101 (537)
Q Consensus        37 ~~~~~Pgp~~~~p~iG~~~~~~~----~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~d~~~~~~vl~~---  101 (537)
                      ..+.|||+ .++|++|+...+.+    ..+..++.+.++|||+ ||+++++|.++       ++++||++++.||..   
T Consensus        15 ~~~~PPg~-~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         15 PLREIPGS-YGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCC-CCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            34668998 78999999876432    2246899999999999 99999998666       999999999999975   


Q ss_pred             -CCccccCCCccchhhhhccCCceeEeCCCChhHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 009347          102 -HDRVFASRPKALVAEILGFNFSMFGFSPYGPHWRQIRKIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYK  180 (537)
Q Consensus       102 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  180 (537)
                       +...+........ ..+|.+....+++.+|+.|+++|+++. +.|+ ..++.+.+.+.+.+++++++|...+       
T Consensus        94 ~~~~~~~~~~~~~~-~l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~-------  163 (480)
T PLN02648         94 DKRDVFTGTYMPST-AFTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAEL-------  163 (480)
T ss_pred             cccccceeeeccCc-cccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHH-------
Confidence             4343443332222 344432222456788999999999998 8898 4778999999999999999985431       


Q ss_pred             CCCccCccccccchhHHHHHHHHHHHHHhhhcccccCCCCCcchhhHHHHHHHHHHHHhcccccccccccc-cccc----
Q 009347          181 SSDHNNNKKVLVEMNKWFEDVTLNAILRVTVGQRCNSSSSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLP-FLRW----  255 (537)
Q Consensus       181 ~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~----  255 (537)
                       .   .| . ++|+.+.++.+++|++++++||...+.    .+  ....+...+..+............+| ++..    
T Consensus       164 -~---~~-~-~vdv~~~~~~lt~~vi~~~lfG~~~~~----~~--l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~  231 (480)
T PLN02648        164 -A---KK-G-KAEFNDPLDQMAFNFLCKALTGKDPSE----TA--LGSDGPALIQKWLALQLAPLASTGLPHVLEELLLH  231 (480)
T ss_pred             -h---hC-C-CccccchHHHHHHHHHHHHHcCCCcch----hh--hccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhc
Confidence             1   23 3 799999999999999999999987621    00  11112222222111000000000011 0000    


Q ss_pred             -ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHH-H
Q 009347          256 -FDIGGDERAMKKNARELDVLAQGWLDEHKRKRESGQMINKEGHEDFMDVMLSILRDDAQQLPGDDA-DTINKATCLA-L  332 (537)
Q Consensus       256 -~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~-~  332 (537)
                       ++.+.  ....+..+.+.+++.+.                      ++.+++...+.       .+ ++++.++++. +
T Consensus       232 ~~~~~~--~~~~~~~~~~~~~~~~~----------------------~~~ll~~~~~~-------~l~~~ei~~~~l~~~  280 (480)
T PLN02648        232 TFPLPF--FLVKSDYDKLYDFFRAS----------------------ATEALDLAEKF-------GISREEALHNLLFVL  280 (480)
T ss_pred             ccCCch--hhhhccHHHHHHHHHHH----------------------HHHHHHHHHhc-------CCCHHHHHHHHHHHH
Confidence             00000  00000111111111111                      12333322221       24 7888888764 4


Q ss_pred             HHhhhhchHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhcC-CCCCCcccccCCHhHHHHHHHHhccCCCCCCCCcccccC
Q 009347          333 ILAASDTSKITLTWILSLLLNHRD-VLKKAQNELDVHIGK-RRQVNELDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTE  410 (537)
Q Consensus       333 ~~ag~dtt~~~l~~~l~~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~  410 (537)
                      .+++++|++++++|++|+|++||+ +|++|++|++++.+. +..++++++++||||++||+|+||++|+++.. .|.+.+
T Consensus       281 ~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~  359 (480)
T PLN02648        281 GFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRARE  359 (480)
T ss_pred             HHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecC
Confidence            466777778899999999999995 999999999999864 45689999999999999999999999999987 677899


Q ss_pred             CCccc----ceeeCCCcEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccccCCcccccc---------cCCCCCCCC
Q 009347          411 DCTVN----DYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHIDVRGQNFELLP---------FSSGRRMCP  477 (537)
Q Consensus       411 d~~~~----g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~~---------Fg~G~r~C~  477 (537)
                      |++++    ||.||||+.|+++.+.+||||++|+||++|+|+||++++.+     ....+++         ||+|+|.|+
T Consensus       360 d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~  434 (480)
T PLN02648        360 DFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCA  434 (480)
T ss_pred             CEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCc
Confidence            99996    79999999999999999999999999999999999864321     1123333         467889999


Q ss_pred             chhhHHHHHHHHHHHHHhhcc-eeCCCC
Q 009347          478 GPSFAIPVTHLTLATLLHGFD-FETPLD  504 (537)
Q Consensus       478 G~~~A~~e~~~~l~~ll~~f~-~~~~~~  504 (537)
                      |++||++|++++++.|+++|+ +++.+|
T Consensus       435 G~~~A~~e~~~~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        435 GKDFVVLVARLFVAELFLRYDSFEIEVD  462 (480)
T ss_pred             cHHHHHHHHHHHHHHHHHHhCEEeecCC
Confidence            999999999999999999998 998776


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.3e-53  Score=411.74  Aligned_cols=381  Identities=27%  Similarity=0.366  Sum_probs=303.4

Q ss_pred             hHHHHHHHHhhCCeeEEecCCee--EEEecCHHHHHHHHHhCCccccCCCccchhh--hhccCCceeEeCCCChhHHHHH
Q 009347           63 HRVLGDMADKYGPIFTIRMGVHR--ALVVSNWEMAKECLTTHDRVFASRPKALVAE--ILGFNFSMFGFSPYGPHWRQIR  138 (537)
Q Consensus        63 ~~~~~~~~~kyG~v~~~~~~~~~--~vvv~d~~~~~~vl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~R  138 (537)
                      ......+.+.||.++++...++.  ++++++++++++++.++. .++.........  ..........++.||+.|+++|
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            34566678889999988876654  899999999999999873 222222211111  0111111225778999999999


Q ss_pred             HHHHHhhcCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCccccccchhHHHHHHHHHHHHHhhhcccccCC
Q 009347          139 KIATLELLSNHRLEKLKHVREGEVKTCLKELYDFWERTNNYKSSDHNNNKKVLVEMNKWFEDVTLNAILRVTVGQRCNSS  218 (537)
Q Consensus       139 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~  218 (537)
                      |+++ +.|++..++.+.+.+.+.++++++.+ .              .+ + ..++.+....+++++|+ .+||.+.   
T Consensus       104 kl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~--------------~~-~-~~~v~~~a~~l~~~vi~-~l~Gv~~---  161 (411)
T COG2124         104 KLLA-PAFTPRALRGYRPLIREIADRLLDDL-W--------------QG-G-ADLVLDFAAELTLRVIA-ELLGVPL---  161 (411)
T ss_pred             HHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c--------------cC-C-chhHHHHhhhhhHHHHH-HHhCCCH---
Confidence            9999 89999999999999999999999998 4              23 3 78999999999999999 9999987   


Q ss_pred             CCCcchhhHHHHHHHHHHHHhccccccccccccccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccCCCC
Q 009347          219 SSQEDTDHEGAWKEELTKFFAFSGKFVVSDSLPFLRWFDIGGDERAMKKNARELDVLAQGWLDEHKRKRESGQMINKEGH  298 (537)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  298 (537)
                         ++   ...+............        |...   ......+..++.+.+.+++.++|++++.          ...
T Consensus       162 ---~~---~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~----------~~~  214 (411)
T COG2124         162 ---ED---RPQLLRWSDALLLRLD--------PDLG---PEEPWRRARAARRELDAYLRALIAERRA----------APR  214 (411)
T ss_pred             ---HH---HHHHHHHHHHHHhccC--------cccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc----------CCc
Confidence               22   1233333332222100        2111   1122466778888999999999999983          578


Q ss_pred             CCHHHHHHHHhhhcccCCCCCCc-hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCCCCc
Q 009347          299 EDFMDVMLSILRDDAQQLPGDDA-DTINKATCLALILAASDTSKITLTWILSLLLNHRDVLKKAQNELDVHIGKRRQVNE  377 (537)
Q Consensus       299 ~d~l~~ll~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  377 (537)
                      +|+++.|+....++     +..+ ++|+.++++++++||+|||+++++|++|.|++||+.++++++|.+.          
T Consensus       215 ~dlls~l~~a~~~~-----~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------  279 (411)
T COG2124         215 DDLLSLLLSAEDDG-----GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------  279 (411)
T ss_pred             ccHHHHHHHHhhCC-----CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------
Confidence            99999999887765     2246 9999999999999999999999999999999999999999999776          


Q ss_pred             ccccCCHhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEeccccccCCCCCCCCCCCCCCCCccCCCCCc
Q 009347          378 LDIKNLVYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYVNVWKIHRDPRVWPEPYKFKPERFLTTHKHI  457 (537)
Q Consensus       378 ~~l~~l~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~  457 (537)
                            ||+.++++|+||++||++. .+|.+.+|++++|+.||||+.|.++++.+||||++|++|++|+|+||.      
T Consensus       280 ------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------  346 (411)
T COG2124         280 ------PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------  346 (411)
T ss_pred             ------HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------
Confidence                  7899999999999999999 699999999999999999999999999999999999999999999996      


Q ss_pred             cccCCcccccccCCCCCCCCchhhHHHHHHHHHHHHHhhcceeCCCCCCCCcccccceeeeecCceEEEEecc
Q 009347          458 DVRGQNFELLPFSSGRRMCPGPSFAIPVTHLTLATLLHGFDFETPLDEPVDMSEGMSLTLVKTTPVKVLITPR  530 (537)
Q Consensus       458 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  530 (537)
                            ..|+|||+|+|.|+|.+||++|++++++.+|++|++....+ + + ......+..+..+..+.++.|
T Consensus       347 ------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~-~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         347 ------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P-P-PLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             ------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-C-CccccccccCCCcceeeeecC
Confidence                  45899999999999999999999999999999999888765 2 1 122233455666777766654


No 33 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.92  E-value=17  Score=23.81  Aligned_cols=19  Identities=26%  Similarity=0.424  Sum_probs=16.1

Q ss_pred             HHHHHHHhCHHHHHHHHHH
Q 009347          346 WILSLLLNHRDVLKKAQNE  364 (537)
Q Consensus       346 ~~l~~L~~~p~~~~~l~~E  364 (537)
                      -++.||.+||++.++|.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            3567999999999999874


No 34 
>PF15050 SCIMP:  SCIMP protein
Probab=47.19  E-value=42  Score=25.67  Aligned_cols=18  Identities=17%  Similarity=0.065  Sum_probs=12.5

Q ss_pred             CCCCCCCCCCcceeeccc
Q 009347           39 RGPPEAGGAWPVIGHLHL   56 (537)
Q Consensus        39 ~~~Pgp~~~~p~iG~~~~   56 (537)
                      ..||-|+++.+..|+...
T Consensus        68 ~LPpLPPRg~~s~~~~sp   85 (133)
T PF15050_consen   68 QLPPLPPRGSPSPEDSSP   85 (133)
T ss_pred             CCCCCCCCCCCCccccCc
Confidence            347777788888887543


No 35 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=43.59  E-value=96  Score=30.63  Aligned_cols=63  Identities=10%  Similarity=0.143  Sum_probs=34.3

Q ss_pred             CCCCCCCCCcceeeccccCCCcHhHHHHHH-HHhhCCeeEEecCCeeEEEecCHHHHHHHHHhCCccccCC
Q 009347           40 GPPEAGGAWPVIGHLHLLGRFPLHRVLGDM-ADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHDRVFASR  109 (537)
Q Consensus        40 ~~Pgp~~~~p~iG~~~~~~~~~~~~~~~~~-~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~~~~~~~~  109 (537)
                      ..+||.+..|+++.      + +...++-. .-+||.|++-.+-++.+-|=.=|..-++=+.+..+.|+..
T Consensus       196 ~d~~~~~sspl~~l------~-pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp  259 (534)
T KOG3653|consen  196 EDSGPAPSSPLLEL------D-PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP  259 (534)
T ss_pred             CCCCCCCCcccccC------C-chhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhcc
Confidence            34555556666652      2 22333322 3368888887777766555444444455555555666544


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=40.97  E-value=67  Score=20.28  Aligned_cols=42  Identities=14%  Similarity=0.017  Sum_probs=31.9

Q ss_pred             hHHHHHHHHHHhhhhchHHHHHHHHHHHHhCHHHHHHHHHHH
Q 009347          324 INKATCLALILAASDTSKITLTWILSLLLNHRDVLKKAQNEL  365 (537)
Q Consensus       324 ~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei  365 (537)
                      ++..++..++-.|.|-.+-.+.-.|.+.--||+..+.+.+|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            344556667777888877777777778788999888888776


No 37 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=35.98  E-value=62  Score=24.67  Aligned_cols=13  Identities=31%  Similarity=0.366  Sum_probs=8.8

Q ss_pred             CCCcceeeccccC
Q 009347           46 GAWPVIGHLHLLG   58 (537)
Q Consensus        46 ~~~p~iG~~~~~~   58 (537)
                      -.-|+.||+-...
T Consensus        44 E~~p~YgNL~~~q   56 (107)
T PF15330_consen   44 EDDPCYGNLELQQ   56 (107)
T ss_pred             CCCcccccccccc
Confidence            3668888866653


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=34.69  E-value=27  Score=30.09  Aligned_cols=42  Identities=19%  Similarity=0.333  Sum_probs=30.6

Q ss_pred             HhHHHHHHHHhccCCCCCCCCcccccCCCcccceeeCCCcEEEe
Q 009347          384 VYLQAIIKEAMRLYPAGPLAAPHASTEDCTVNDYFVPAGTVLYV  427 (537)
Q Consensus       384 ~~l~a~i~E~lRl~~~~~~~~~r~~~~d~~~~g~~ip~G~~v~~  427 (537)
                      ..+.|||.|+.-...-.-+  .-+..+|+.++|..||||+.++-
T Consensus        53 n~I~A~V~~~qtv~~Gs~v--rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   53 NTIRAVVDGTQTVVDGSRV--RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CeEEEEEecceEEeCCCEE--EEEEcCceEECCEEeCCCCEEEE
Confidence            3477899999876543311  22556899999999999998765


No 39 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=33.17  E-value=41  Score=26.57  Aligned_cols=24  Identities=17%  Similarity=0.268  Sum_probs=17.0

Q ss_pred             CCCCchhhHHHHHHHHHHHHHhhc
Q 009347          474 RMCPGPSFAIPVTHLTLATLLHGF  497 (537)
Q Consensus       474 r~C~G~~~A~~e~~~~l~~ll~~f  497 (537)
                      -.|.|+.||..++-.++.+|+..=
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            379999999999999999998753


No 40 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=31.87  E-value=59  Score=25.43  Aligned_cols=7  Identities=14%  Similarity=0.358  Sum_probs=2.6

Q ss_pred             HHHHhcc
Q 009347           24 LLLFVSR   30 (537)
Q Consensus        24 ~~~~~~~   30 (537)
                      ++++++|
T Consensus        84 i~y~irR   90 (122)
T PF01102_consen   84 ISYCIRR   90 (122)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3333333


No 41 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=31.67  E-value=50  Score=22.43  Aligned_cols=15  Identities=40%  Similarity=0.618  Sum_probs=12.4

Q ss_pred             CCHhHHHHHHHHhcc
Q 009347          382 NLVYLQAIIKEAMRL  396 (537)
Q Consensus       382 ~l~~l~a~i~E~lRl  396 (537)
                      +..+++.+|+|++|+
T Consensus        39 r~~fv~~~IkEA~RF   53 (65)
T PF15300_consen   39 RKQFVEMIIKEAARF   53 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            345689999999996


No 42 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=31.27  E-value=2.2e+02  Score=21.54  Aligned_cols=40  Identities=28%  Similarity=0.296  Sum_probs=30.3

Q ss_pred             HhHHHHHHHHhhCCeeEEecCC------eeEEEecCHHHHHHHHHh
Q 009347           62 LHRVLGDMADKYGPIFTIRMGV------HRALVVSNWEMAKECLTT  101 (537)
Q Consensus        62 ~~~~~~~~~~kyG~v~~~~~~~------~~~vvv~d~~~~~~vl~~  101 (537)
                      ..+-+-++.-+||+|.++.+|.      .-+||-.|-..++..+..
T Consensus        31 TseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   31 TSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             cHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3567777888999999999873      557777777777776643


No 43 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=28.91  E-value=2.3e+02  Score=20.55  Aligned_cols=48  Identities=6%  Similarity=0.027  Sum_probs=39.8

Q ss_pred             hhhHHHHHHHHHHhhhhchHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Q 009347          322 DTINKATCLALILAASDTSKITLTWILSLLLNHRDVLKKAQNELDVHI  369 (537)
Q Consensus       322 ~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  369 (537)
                      .+.........++-=+.+++....-.+.+-++||+..+++.+.+.+-+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            344445567888999999999999999999999999999999887744


No 44 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=28.50  E-value=43  Score=26.18  Aligned_cols=21  Identities=24%  Similarity=0.328  Sum_probs=17.5

Q ss_pred             cccCCCcccceeeCCCcEEEe
Q 009347          407 ASTEDCTVNDYFVPAGTVLYV  427 (537)
Q Consensus       407 ~~~~d~~~~g~~ip~G~~v~~  427 (537)
                      ++++|.+++|..||+|+.|+.
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            456789999999999998863


No 45 
>PRK06789 flagellar motor switch protein; Validated
Probab=28.25  E-value=54  Score=23.00  Aligned_cols=41  Identities=10%  Similarity=0.139  Sum_probs=31.0

Q ss_pred             HHHHHhccCCCCCCCCcccccCC--CcccceeeCCCcEEEecc
Q 009347          389 IIKEAMRLYPAGPLAAPHASTED--CTVNDYFVPAGTVLYVNV  429 (537)
Q Consensus       389 ~i~E~lRl~~~~~~~~~r~~~~d--~~~~g~~ip~G~~v~~~~  429 (537)
                      -++|.+.+.+-.....-|.+.++  ..++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            47888999887766555666655  455999999999988754


No 46 
>PF14004 DUF4227:  Protein of unknown function (DUF4227)
Probab=27.31  E-value=1.4e+02  Score=20.81  Aligned_cols=33  Identities=18%  Similarity=0.370  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCCCCCCC
Q 009347           12 AAILTLIIFLYTLLLFVSRNYASNKKKRGPPEA   44 (537)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp   44 (537)
                      ++.+++.++.+..+.|+...+...++.+.|-|+
T Consensus        11 ~LF~~~T~lfYy~~~w~~~~~~~~hrY~eP~G~   43 (71)
T PF14004_consen   11 LLFTGCTLLFYYAILWVSDEYEPYHRYDEPEGS   43 (71)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence            344455555556666666777777888888775


No 47 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=25.48  E-value=1.9e+02  Score=22.91  Aligned_cols=39  Identities=21%  Similarity=0.237  Sum_probs=31.3

Q ss_pred             HhHHHHHHHHhhCCeeEEecCCeeEEEecCHHHHHHHHHhC
Q 009347           62 LHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTH  102 (537)
Q Consensus        62 ~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~vl~~~  102 (537)
                      ....+++|.++||.+--.  .+..++...|++.+.++...+
T Consensus        76 v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            567899999999987553  246778888999999998764


No 48 
>COG3190 FliO Flagellar biogenesis protein [Cell motility and secretion]
Probab=25.06  E-value=3.6e+02  Score=21.64  Aligned_cols=26  Identities=19%  Similarity=0.312  Sum_probs=16.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccc
Q 009347            8 TSAVAAILTLIIFLYTLLLFVSRNYA   33 (537)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~   33 (537)
                      ..-+.+.+++++.+++++.|+.+++.
T Consensus        24 ~~~~~gsL~~iL~lil~~~wl~kr~~   49 (137)
T COG3190          24 LAQMFGSLILILALILFLAWLVKRLG   49 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            33455555666666677777777655


No 49 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=23.90  E-value=36  Score=21.87  Aligned_cols=11  Identities=36%  Similarity=0.761  Sum_probs=9.1

Q ss_pred             cccCCCCCCCC
Q 009347          467 LPFSSGRRMCP  477 (537)
Q Consensus       467 ~~Fg~G~r~C~  477 (537)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999984


No 50 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=22.90  E-value=1.7e+02  Score=18.77  Aligned_cols=17  Identities=18%  Similarity=0.047  Sum_probs=8.9

Q ss_pred             HHHHHHHHHHHHHhccc
Q 009347           15 LTLIIFLYTLLLFVSRN   31 (537)
Q Consensus        15 ~~~~~~~~~~~~~~~~~   31 (537)
                      +++.++.+.+++|..|+
T Consensus        12 l~l~~~~l~~f~Wavk~   28 (51)
T TIGR00847        12 LLLGGVGLVAFLWSLKS   28 (51)
T ss_pred             HHHHHHHHHHHHHHHcc
Confidence            34444445566666554


No 51 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=22.83  E-value=1.5e+02  Score=21.47  Aligned_cols=18  Identities=28%  Similarity=0.331  Sum_probs=15.7

Q ss_pred             CHHHHHHHHHHHHHHhcC
Q 009347          354 HRDVLKKAQNELDVHIGK  371 (537)
Q Consensus       354 ~p~~~~~l~~Ei~~~~~~  371 (537)
                      .|++.+.+|+||-+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            489999999999998765


No 52 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=22.58  E-value=2.2e+02  Score=20.56  Aligned_cols=6  Identities=67%  Similarity=0.988  Sum_probs=3.9

Q ss_pred             CCccee
Q 009347           47 AWPVIG   52 (537)
Q Consensus        47 ~~p~iG   52 (537)
                      +.|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            457777


No 53 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=21.45  E-value=2.3e+02  Score=18.02  Aligned_cols=34  Identities=15%  Similarity=0.192  Sum_probs=24.1

Q ss_pred             HHHHHhhCCeeEEecCC----eeEEEecCHHHHHHHHH
Q 009347           67 GDMADKYGPIFTIRMGV----HRALVVSNWEMAKECLT  100 (537)
Q Consensus        67 ~~~~~kyG~v~~~~~~~----~~~vvv~d~~~~~~vl~  100 (537)
                      .++-.+||+|-++.+..    .-+|-..+++.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            45678899999987653    34566668888888776


No 54 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=21.40  E-value=1.3e+02  Score=22.14  Aligned_cols=29  Identities=17%  Similarity=0.203  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Q 009347          342 ITLTWILSLLLNHRDVLKKAQNELDVHIG  370 (537)
Q Consensus       342 ~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  370 (537)
                      .++.|.+.-....||..+.|++||+++-.
T Consensus        54 ~~lgy~v~tFnDcpeA~~eL~~eI~eAK~   82 (91)
T PF08285_consen   54 FTLGYGVATFNDCPEAAKELQKEIKEAKA   82 (91)
T ss_pred             HHHHHhhhccCCCHHHHHHHHHHHHHHHH
Confidence            45677777777899999999999998643


No 55 
>PHA03162 hypothetical protein; Provisional
Probab=21.34  E-value=97  Score=24.29  Aligned_cols=24  Identities=21%  Similarity=0.411  Sum_probs=20.0

Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHH
Q 009347          470 SSGRRMCPGPSFAIPVTHLTLATL  493 (537)
Q Consensus       470 g~G~r~C~G~~~A~~e~~~~l~~l  493 (537)
                      ++|.+.|||+...+-|+-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999998887777665


No 56 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=20.30  E-value=3e+02  Score=22.27  Aligned_cols=49  Identities=14%  Similarity=0.121  Sum_probs=35.5

Q ss_pred             ceeeccccCCCcHhHHHHHHHHhhCCeeEEecC---------CeeEEEecCHHHHHHHHHh
Q 009347           50 VIGHLHLLGRFPLHRVLGDMADKYGPIFTIRMG---------VHRALVVSNWEMAKECLTT  101 (537)
Q Consensus        50 ~iG~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~---------~~~~vvv~d~~~~~~vl~~  101 (537)
                      ++|++..-.   ..+.+.++-++||+|..+.+.         +--+|-..++++++.++..
T Consensus        38 fVgnL~~~~---te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         38 FIGGLSWGT---DDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             EEeCCCCCC---CHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            455544432   246788888999998887653         3457788899999999975


No 57 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.18  E-value=1.3e+02  Score=18.29  Aligned_cols=19  Identities=21%  Similarity=0.053  Sum_probs=14.8

Q ss_pred             HHHHHHHHhCHHHHHHHHH
Q 009347          345 TWILSLLLNHRDVLKKAQN  363 (537)
Q Consensus       345 ~~~l~~L~~~p~~~~~l~~  363 (537)
                      .|-+.-++++||+|.-|.=
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4667778999999987753


Done!