BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009356
(537 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224068610|ref|XP_002302783.1| predicted protein [Populus trichocarpa]
gi|222844509|gb|EEE82056.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/479 (51%), Positives = 309/479 (64%), Gaps = 36/479 (7%)
Query: 38 DNYHSHHRRHYQYD---QMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYV 94
+ +++H+ HY YD QMS E + F G GRKRG H + D G+ AKLY+
Sbjct: 27 NQFNNHNHSHYNYDSNQQMSGEANEPFIGGLFRPNGRKRGRFHSS--DYGDGGVNAKLYI 84
Query: 95 APVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGH 154
AP+PRT TEE+IR LFEEHG+V+EVVLP+DKRTGQQQ YCFVK+ FEEA AIRAL+
Sbjct: 85 APIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRALHNQ 144
Query: 155 YIFPGEQASIKVRFADGEREHPVAP-------PDKLYVGCLSKQTSKKEIEEVFSPYGHI 207
+ PGE A KVR+ADGERE PVA DKLYVG ++K SK+EIEE+FSPYGH+
Sbjct: 145 HTIPGEVAPFKVRYADGERERPVARCSMVGGFVDKLYVGSINKLASKQEIEEIFSPYGHV 204
Query: 208 EDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTG 267
ED++I RDELKQSRGCAFV+F+HR+MALAAI GLNGT TMRG DQPL+VR ADPKKP+TG
Sbjct: 205 EDVYIARDELKQSRGCAFVKFAHRDMALAAIKGLNGTLTMRGCDQPLIVRFADPKKPKTG 264
Query: 268 ELRGNYAFGTPSFGPNFLEP-VRPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWG 326
ELRG++AFG P+FGP +P +RP P G LPN S+ Q PQ ++
Sbjct: 265 ELRGSFAFGGPNFGPCSQQPMIRPAP-------GCFLPNASFSMQQTSTTGVPQAVAHAA 317
Query: 327 NQEAATP-IIQQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSST 385
QE A+P I +Q S + S SQLSQ+ LQ +Q P + Q QQA+ D KQ
Sbjct: 318 KQEFASPHITEQPLSSIKHSPSQLSQMPLQHMQAPEKCFQSPQQAIFDTHKQ-------- 369
Query: 386 QNVEQQQNSHVIVSESESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGN 445
+ + + P N Q ++ S VP SPQ+ ECDWSEH+CPDG
Sbjct: 370 --TQILEQQQNQQLALQEPAWTGNIQPASRNSVTSAVPPSPQIVDPGECDWSEHSCPDGY 427
Query: 446 KYYYNCETCESRWDKPEEYLLFEQQIEKQQKLQNGSQS-----VSSTKEVAQTQEVQLQ 499
KYYYNC TCESRW+KP E LF QQ +++++L +Q V S +EV QTQ+V L+
Sbjct: 428 KYYYNCITCESRWEKPVEITLFLQQFQEEKRLHGSNQQSSLSPVCSAEEVDQTQKVLLE 486
>gi|255548387|ref|XP_002515250.1| RNA binding protein, putative [Ricinus communis]
gi|223545730|gb|EEF47234.1| RNA binding protein, putative [Ricinus communis]
Length = 564
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 244/506 (48%), Positives = 313/506 (61%), Gaps = 33/506 (6%)
Query: 39 NYHSHHRRHYQYDQMSSEPTDFFNGQPMPFI--GRKRGFNHP----APDHINDSGIPAKL 92
N+ ++H+R M++E + F G F GRKRG +PDH N KL
Sbjct: 85 NFDANHQR------MNAESNESFGGG---FFSNGRKRGRYFSGRPGSPDH-NLDAASVKL 134
Query: 93 YVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALN 152
+VAPVP T E+I PLFE HG+++EV+LP+D+R+GQQQGYCFVK+ EEA AIRALN
Sbjct: 135 FVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCFVKYATIEEADRAIRALN 194
Query: 153 GHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFI 212
G Y PGE +KVR+AD ERE DKLYVGC++KQ SK+EIEE+FSPYGH+ED++I
Sbjct: 195 GQYTIPGEVHPLKVRYADRERERLCKVVDKLYVGCINKQASKQEIEEIFSPYGHVEDVYI 254
Query: 213 VRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGN 272
VRD LKQSRGCAFV+ R+ A+AAI L+GTFTMRG DQPL+V+ ADPKK R GELRGN
Sbjct: 255 VRDNLKQSRGCAFVKLPDRDKAVAAIKALHGTFTMRGCDQPLIVKFADPKKRRAGELRGN 314
Query: 273 YAFGTPSFGPNFLEPV-RPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAA 331
F +FGP EP+ RP PN +S G +LPN SY NS P +N A
Sbjct: 315 IPFSGQNFGPCSQEPMNRPIPNFCDSMAGGVLPNASYPMHETPTNSQPLAITNTLAHSAP 374
Query: 332 TPIIQQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQ 391
I Q L +Q QL Q+ LQQ Q P+ Q SQ+ V++M KQ TQNVEQQ
Sbjct: 375 QTITQPL-SPVKQPPLQLYQMPLQQTQGPQNLMQSSQETVTEMMKQ-------TQNVEQQ 426
Query: 392 QNSHVIVSESESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNC 451
Q+ + + ESP SG +P S VP S Q ECDWSEH+CPDG KYYYNC
Sbjct: 427 QSVQIPL---ESPCSGGHPPAVNDTSADSLVPPSHQTEDPQECDWSEHSCPDGYKYYYNC 483
Query: 452 ETCESRWDKPEEYLLFEQQIEKQQKLQNGSQSVSSTKEVAQTQEVQLQPHVFRKKVQLQD 511
T ESRW+KP+E++LF+QQ++KQQ Q+ S+ S +E P ++
Sbjct: 484 MTLESRWEKPDEFILFQQQLQKQQNAQSSSRQSYSLSTGFSVEEADRTP-----SIKYST 538
Query: 512 PSVSASEQDHLQVQTKSSPVVHPTCV 537
+ + + +Q+Q+++S VV PTCV
Sbjct: 539 STSLPVDVEPMQIQSEASLVVDPTCV 564
>gi|356503942|ref|XP_003520758.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 496
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/432 (48%), Positives = 277/432 (64%), Gaps = 44/432 (10%)
Query: 71 RKRGFNH----PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKR 126
RKR ++H +PD ++ + K+YVAPVPRTATE++IRP+FEEHG ++E+VL K K+
Sbjct: 53 RKRPWHHSNNGTSPDQVD---VSCKVYVAPVPRTATEDEIRPVFEEHGTIVEIVLLKHKK 109
Query: 127 TGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH----------- 175
TG +QG CFVK+ F+EA AI+ LN Y F GE + V+FAD E E
Sbjct: 110 TGTRQGSCFVKYATFDEADRAIKVLNNKYTFAGESYPVVVKFADRELERLGVRGLCRNME 169
Query: 176 ---PVAP-PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHR 231
P+ DK++V ++K+ + K+IEE+FSPYGH+EDIF K + G AFV+FS+R
Sbjct: 170 KKDPLEEVADKVFVSSINKEATNKDIEEIFSPYGHVEDIF-----FKSTHGYAFVKFSNR 224
Query: 232 EMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRP 290
EMALAAI GLN TFTMRG D PL+VR ADPKKP+TGE RGNY +FGP EP V P
Sbjct: 225 EMALAAIKGLNKTFTMRGCDHPLIVRFADPKKPKTGESRGNYLSVNANFGPCSQEPAVWP 284
Query: 291 PPNLGNS-AGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQL 349
PN G+S GG ILP+ Y +HPQV S+ N E ++Q Q Q+
Sbjct: 285 LPNFGDSNTGGIILPHAPYHS----TIAHPQVTSHMQNWEPGATVLQHPF-PPHQVHPQV 339
Query: 350 SQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESESPRSGNN 409
+ +SL IQ P+ +SQL ++++Q++ H SS QN+EQQ +S + S++ES N
Sbjct: 340 ASMSLGSIQAPKLSSQL---FITEVQRESHPADSSVQNIEQQLSSQ-LPSQTES-----N 390
Query: 410 PQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQ 469
P T + T P +P S Q PECDWSEH CPDG+KYYYNC TCESRWDKPEEY L+E+
Sbjct: 391 PST-VTGITPPDMPTSSQDEDFPECDWSEHYCPDGDKYYYNCVTCESRWDKPEEYALYEK 449
Query: 470 QIEKQQKLQNGS 481
+ +KQQ+ ++ S
Sbjct: 450 ESQKQQEQEDNS 461
>gi|297824821|ref|XP_002880293.1| hypothetical protein ARALYDRAFT_483907 [Arabidopsis lyrata subsp.
lyrata]
gi|297326132|gb|EFH56552.1| hypothetical protein ARALYDRAFT_483907 [Arabidopsis lyrata subsp.
lyrata]
Length = 505
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 203/459 (44%), Positives = 268/459 (58%), Gaps = 69/459 (15%)
Query: 87 GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
G AKLYVAP+ +T+TE DIR +FE +GNV E++LPKDK TG + YCFVK+ EE
Sbjct: 106 GSIAKLYVAPISKTSTEYDIRQVFETYGNVTEIILPKDKMTGDRAAYCFVKYKTVEEGNA 165
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREH----PVAPPD--KLYVGCLSKQTSKKEIEEV 200
AI AL + FPGE +KVRFAD ERE PV PPD KLY+ CL+KQT+K E+ EV
Sbjct: 166 AIAALAEQFTFPGEMLPLKVRFADAERERIGFAPVQPPDNPKLYIRCLNKQTTKMEVHEV 225
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
FS +G IEDI++ D++K SRG AFVQFS REMALAAI GLNG FTMRGSDQPL+VR AD
Sbjct: 226 FSRFGIIEDIYMALDDMKISRGYAFVQFSCREMALAAIKGLNGVFTMRGSDQPLIVRFAD 285
Query: 261 PKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQ 320
PKKPR+ F T PP + QH N H Q
Sbjct: 286 PKKPRS-------TFNT-------------PPAM----------------QHFDPNWHSQ 309
Query: 321 VFSNWGNQEAATPIIQQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHL 380
+ W N+E A P + Q H S Q P QN+ QAVS++ + LH
Sbjct: 310 PYPQWENKEPAAPRVVQHH-----------DFSSQPNHFPHQNT----QAVSEVHQPLH- 353
Query: 381 RQSSTQNVEQQQNSHVIVSESESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHT 440
+ QN+E+ QNS + E+ R G + S+ +++ P Q S ECDWSEHT
Sbjct: 354 QDIPPQNLEKHQNSE--TASVETRRDGQ--KISSHSNSFP----EEQNTVSSECDWSEHT 405
Query: 441 CPDGNKYYYNCETCESRWDKPEEYLLFEQQIEKQQKLQN---GSQSVSSTKEVAQTQEVQ 497
CPDGNKYY++C TCES W+KPEEY +FE+ E+Q +LQ+ S +++ + A Q
Sbjct: 406 CPDGNKYYFHCVTCESTWEKPEEYSMFERWFEEQTRLQDLKLVSPPLNNESQKAIENSEQ 465
Query: 498 LQPHVFRKKVQLQDPSVSASEQDHLQVQTKSSPVVHPTC 536
++ + ++ +LQ PS+S ++Q++ V ++ V TC
Sbjct: 466 VKSDLLQQNAKLQQPSLSTADQENNVVYRVTTLAVETTC 504
>gi|30690648|ref|NP_850472.1| flowering time control protein-like protein [Arabidopsis thaliana]
gi|50897178|gb|AAT85728.1| At2g47310 [Arabidopsis thaliana]
gi|53793649|gb|AAU93571.1| At2g47310 [Arabidopsis thaliana]
gi|110738579|dbj|BAF01215.1| putative FCA-related protein [Arabidopsis thaliana]
gi|330255732|gb|AEC10826.1| flowering time control protein-like protein [Arabidopsis thaliana]
Length = 512
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/463 (42%), Positives = 265/463 (57%), Gaps = 65/463 (14%)
Query: 84 NDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEE 143
N G AKLYVAP+ +TATE DIR +FE++GNV E++LPKDK TG++ YCF+K+ EE
Sbjct: 104 NADGSIAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEE 163
Query: 144 AGNAIRALNGHYIFPGEQASIKVRFADGEREH----PVAPPD--KLYVGCLSKQTSKKEI 197
AI AL + FPGE +KVRFA+ ERE PV PD KLYV CL+KQT+K E+
Sbjct: 164 GNAAIAALTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNKQTTKMEV 223
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
EVFS YG IEDI++ D++K RG AFVQFS +EMALAAI LNG FT+RGSDQPL+VR
Sbjct: 224 NEVFSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLIVR 283
Query: 258 IADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNS 317
ADPKKPR GE R F T PP + QH N
Sbjct: 284 FADPKKPRLGEQRS--TFNT-------------PPAM----------------QHFDPNW 312
Query: 318 HPQVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQ 377
H Q + W N+E A P + Q H S Q P QN+ QAVS++ K
Sbjct: 313 HSQPYPQWENKEPAPPRVVQHH-----------DFSSQPNHFPHQNT----QAVSEVHKP 357
Query: 378 LHLRQSSTQNVEQQQNSHVIVSESESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWS 437
LH + N E+ Q S E+ S + ++A TV S ECDWS
Sbjct: 358 LH-QDIPPANFEKHQKSETASVETRSDGQKISSHSNAFHEDQNTV--------SSECDWS 408
Query: 438 EHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQIEKQQKLQN---GSQSVSSTKEVAQTQ 494
EHTCP+GNKYY++C TCES W+KP+EY ++E+ +++Q +LQ+ S +++ + A
Sbjct: 409 EHTCPNGNKYYFHCITCESTWEKPDEYSMYERWLKEQTRLQDEKIKSPPLNNESQEAIEN 468
Query: 495 EVQLQPHVFRKKVQLQDPSVSASEQD-HLQVQTKSSPVVHPTC 536
Q++ V ++ +LQ PS+S ++Q+ ++ V ++ V TC
Sbjct: 469 SEQVESDVLQQNGELQQPSLSTADQENNVVVYPVTTLAVETTC 511
>gi|388506964|gb|AFK41548.1| unknown [Medicago truncatula]
Length = 498
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/428 (44%), Positives = 260/428 (60%), Gaps = 47/428 (10%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
I RKR + P D ++ +G K+YVAPVPRTA+E D+R +F+ +G ++EVVL +DK TG
Sbjct: 55 IPRKRQWG-PPQDQVDVTGH-VKVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATG 112
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH-----------PV 177
+QG C VK++ F+ A I+AL+ Y FPGE + + VRF D +RE
Sbjct: 113 VRQGSCLVKYSTFDVADMTIKALSNQYTFPGESSPVVVRFTDRKRERFGLRDFCQNMERR 172
Query: 178 APPD---KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMA 234
PP+ K+YVGC++ + SK+EIEE+FSPYGHIED+ ++R+ R FV+F +REMA
Sbjct: 173 DPPEVVGKVYVGCINNEASKQEIEEIFSPYGHIEDVVVLRN-----RRYGFVKFYNREMA 227
Query: 235 LAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPP--- 291
LAAI GL+ TFTMRG DQPL+VR A+PKKPR GELRGNY S+GP+ EP P
Sbjct: 228 LAAIKGLDRTFTMRGCDQPLIVRFAEPKKPRMGELRGNYLPANASYGPSSQEPAAWPLPN 287
Query: 292 ---PNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQ 348
PN G S I P+ S P N P NW Q AT + QQ Q SQ
Sbjct: 288 FCDPNTGGS-NMHIAPHHSRLPHQQVNAHIP----NW--QPVATVVQQQF--PPQHVHSQ 338
Query: 349 LSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESESPRSGN 408
L+ + L+ +Q P + SQ ++++Q+Q H S QN+EQQ +S + +++ R
Sbjct: 339 LTSMPLRPLQAPNLS---SQPFITEVQRQFHPPDSLVQNIEQQLSSQL---PTQTERC-- 390
Query: 409 NPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
+ ST P + +PQ PE DWSEH CPDGNKYYYNC TCESRW+KP EY L++
Sbjct: 391 ---NTVVGSTSPDLHTNPQDEEFPESDWSEHYCPDGNKYYYNCVTCESRWEKPGEYALYD 447
Query: 469 QQIEKQQK 476
++ +KQ +
Sbjct: 448 KESQKQHE 455
>gi|296083224|emb|CBI22860.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 174/233 (74%), Gaps = 2/233 (0%)
Query: 79 APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKF 138
+PD + G AKL+V VPRTATEEDIRPLFEEHGNV+EV L KDKRTGQQQG CF+K+
Sbjct: 31 SPDRYDGGGF-AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKY 89
Query: 139 TIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIE 198
EEA AIRAL+ Y PG I+VR+ADGERE A KL+VG L+KQ ++KE++
Sbjct: 90 ATSEEAERAIRALHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVK 149
Query: 199 EVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
E+FSPYG +ED++++RDELKQSRGC FV+FSHR+MA+AAI+ LNG +TMRG DQPL VR
Sbjct: 150 EIFSPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRF 209
Query: 259 ADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRPPPNLGNSAGGQILPNVSYRP 310
ADPK+PR GE RG AFG P FGP F P VRP N G+ G +P ++RP
Sbjct: 210 ADPKRPRPGESRGAPAFGGPGFGPRFQAPGVRPTMNQGDPIGSGRIPPNAWRP 262
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 83/145 (57%), Gaps = 18/145 (12%)
Query: 334 IIQQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQN 393
++Q LH QS SQL+QL QQ Q + + Q SQQA S +Q+QL L Q S Q + QQ
Sbjct: 457 LVQPLH----QSPSQLAQLLSQQTQALQASFQSSQQAFSQLQQQLQLMQPSNQTLTSQQG 512
Query: 394 SHVIVSESESPRSGNNPQTSASASTIP----------TVPQSPQVAASPECDWSEHTCPD 443
S ++ + P G PQT AS +TI VP + Q A +C+W+EHT PD
Sbjct: 513 SQT--TKQQWP--GTVPQTVASTATITPATDVPSTTSAVPVTTQAVAPVKCNWTEHTSPD 568
Query: 444 GNKYYYNCETCESRWDKPEEYLLFE 468
G KYY+N T ESRW+KPEE L E
Sbjct: 569 GYKYYHNSVTGESRWEKPEELTLLE 593
>gi|359477208|ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
Length = 785
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 174/233 (74%), Gaps = 2/233 (0%)
Query: 79 APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKF 138
+PD + G AKL+V VPRTATEEDIRPLFEEHGNV+EV L KDKRTGQQQG CF+K+
Sbjct: 108 SPDRYDGGGF-AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKY 166
Query: 139 TIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIE 198
EEA AIRAL+ Y PG I+VR+ADGERE A KL+VG L+KQ ++KE++
Sbjct: 167 ATSEEAERAIRALHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVK 226
Query: 199 EVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
E+FSPYG +ED++++RDELKQSRGC FV+FSHR+MA+AAI+ LNG +TMRG DQPL VR
Sbjct: 227 EIFSPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRF 286
Query: 259 ADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRPPPNLGNSAGGQILPNVSYRP 310
ADPK+PR GE RG AFG P FGP F P VRP N G+ G +P ++RP
Sbjct: 287 ADPKRPRPGESRGAPAFGGPGFGPRFQAPGVRPTMNQGDPIGSGRIPPNAWRP 339
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 83/145 (57%), Gaps = 18/145 (12%)
Query: 334 IIQQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQN 393
++Q LH QS SQL+QL QQ Q + + Q SQQA S +Q+QL L Q S Q + QQ
Sbjct: 534 LVQPLH----QSPSQLAQLLSQQTQALQASFQSSQQAFSQLQQQLQLMQPSNQTLTSQQG 589
Query: 394 SHVIVSESESPRSGNNPQTSASASTIP----------TVPQSPQVAASPECDWSEHTCPD 443
S ++ + P G PQT AS +TI VP + Q A +C+W+EHT PD
Sbjct: 590 SQT--TKQQWP--GTVPQTVASTATITPATDVPSTTSAVPVTTQAVAPVKCNWTEHTSPD 645
Query: 444 GNKYYYNCETCESRWDKPEEYLLFE 468
G KYY+N T ESRW+KPEE L E
Sbjct: 646 GYKYYHNSVTGESRWEKPEELTLLE 670
>gi|356565014|ref|XP_003550740.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 733
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 166/324 (51%), Positives = 210/324 (64%), Gaps = 16/324 (4%)
Query: 22 GNYCSWSSDDHRHNFPDNYHSHHRRHYQYDQMSSE-PTDF-FNGQ--PMPFIGRKRGF-- 75
G + S ++ HR F H R + M +E P +F FNG P P G+KRGF
Sbjct: 11 GGFRSGAAPHHR-AFDSPPHRSPGRGGGFRPMGAEGPAEFGFNGHQAPPPLAGQKRGFPF 69
Query: 76 ---NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQG 132
+PD + D G AKL+V VPRTA+EEDIRPLFEEHGNVIEV L KDK+TGQ QG
Sbjct: 70 SGRGGGSPDRL-DGGSFAKLFVGSVPRTASEEDIRPLFEEHGNVIEVALIKDKKTGQHQG 128
Query: 133 YCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQT 192
CF+K+ EEA AIRAL+ + PG I+VR+ADGERE A KL+VG L+KQ
Sbjct: 129 CCFIKYATSEEADQAIRALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQA 188
Query: 193 SKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQ 252
+ KE+EE+FS YG +ED++++RDE KQSRGC FV++SHR+MALAAI+ LNG +TMRG +Q
Sbjct: 189 TVKEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQ 248
Query: 253 PLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRPPPNLGNSAGGQILPNVSYRPQ 311
PL+VR ADPK+PR G+ RG AFG P FGP F P R P N+ + G ++ P ++RP
Sbjct: 249 PLIVRFADPKRPRQGDSRG-LAFGGPGFGPRFDAPGTRHPSNITDPIGDRMPPPNAWRPM 307
Query: 312 HIFNNSHPQVFSNWGNQEAATPII 335
H N P SN G Q P+I
Sbjct: 308 HPPNVGPP---SNAGLQGMGPPLI 328
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 410 PQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQ 469
P ++ + S +P + Q+ A +C+W+EH P+G KYYYN T ESRW+KPEE +L+EQ
Sbjct: 568 PSSTPANSALPAINQN---MALVKCNWTEHISPEGFKYYYNSVTGESRWEKPEELVLYEQ 624
Query: 470 QIEKQQ-----KLQNGSQSVSSTKEVAQTQEVQLQPHVFRKKV---QLQDPSVSAS 517
+ ++Q+ S+ ++V Q Q VQ Q H+ + + Q+Q PS +S
Sbjct: 625 KKQQQRPSVQQSQTQSQPSILPAQQVPQIQHVQPQSHLQGQVLHQQQIQHPSSLSS 680
>gi|449462184|ref|XP_004148821.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449511891|ref|XP_004164081.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 675
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 183/253 (72%), Gaps = 7/253 (2%)
Query: 64 QPMPFIGRKRGF----NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV 119
QP P +G+KRG+ +PDH + S AKL+V VPRTATEE IRPLFEEHGNVIEV
Sbjct: 23 QPPPVVGQKRGYPFAGRGSSPDHSDGSNF-AKLFVGSVPRTATEEIIRPLFEEHGNVIEV 81
Query: 120 VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAP 179
L KDKRTGQQQG CFVK+T EEA AIR L+ + PG I+VR+ADGERE A
Sbjct: 82 ALIKDKRTGQQQGCCFVKYTTSEEADRAIRNLHNQHTLPGGVGPIQVRYADGERERLGAV 141
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS 239
KL+VG L+KQ S+KE++E+FSPYG +ED++++RDE+KQSRGC FV++SHR+MALAAI+
Sbjct: 142 EYKLFVGSLNKQASEKEVKEIFSPYGVVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAIN 201
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRPPPNLGNSA 298
LNG FTMRG DQPL VR ADPKKPR G+ RG AFG P FG F P RP PN G
Sbjct: 202 ALNGIFTMRGCDQPLSVRFADPKKPRPGDSRGTPAFGGPGFGSRFQPPGPRPTPNFGEFM 261
Query: 299 GGQILPNV-SYRP 310
G +I +V +RP
Sbjct: 262 GDRIPIDVRGFRP 274
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 10/128 (7%)
Query: 417 STIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQIEKQQK 476
ST+P + QV A +C+W+EHT PDG KYYYN T ES+W++PEE + EQQ +K
Sbjct: 532 STVPPAAINTQVVAPVKCNWTEHTSPDGYKYYYNSVTGESKWERPEELSVIEQQQQKPPI 591
Query: 477 LQNGSQ---SVSSTKEVAQTQEVQLQPHVFRKKVQ------LQDPSVSASEQDHLQVQTK 527
LQ +Q + ST++++QT + QLQ F+ + Q LQ PS + E + Q+Q
Sbjct: 592 LQPHNQPHPQLLSTQQLSQTPQAQLQTQ-FQTQSQMPHPQPLQQPSFHSQEGAYTQMQPA 650
Query: 528 SSPVVHPT 535
++ + PT
Sbjct: 651 NNSINDPT 658
>gi|297744002|emb|CBI36972.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/405 (45%), Positives = 226/405 (55%), Gaps = 87/405 (21%)
Query: 181 DKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISG 240
DKLYVG L+KQ SK+EIEE+FSPYG +EDIFIVRD++KQSRGC FV+ S+R+MA+AAI+
Sbjct: 242 DKLYVGYLNKQASKREIEEIFSPYGIVEDIFIVRDDMKQSRGCGFVKLSNRDMAVAAINA 301
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFG------------------- 281
LNG + MRG DQPL+VR ADPKKPR GE RG+ AFG P FG
Sbjct: 302 LNGNYVMRGCDQPLIVRFADPKKPRIGESRGHVAFGGPKFGPRSQEPLGWPAPNVGDPMW 361
Query: 282 ----PNFLEPVRPPPNLGNSAGGQIL---------------------------------P 304
PN L P P + +L
Sbjct: 362 RQFLPNPLYPASPNSTASSCQSSNVLWSASLLVSQISLLQEPLQSTLHFSTSLNLQVMQS 421
Query: 305 NVSYRPQHIFNNSHPQVFSNWGNQEAATP-IIQQLHCSQQQSSSQLSQLSLQQIQIPRQN 363
N S Q I +S PQV S NQ+ P +QQ + QQS SQ LQQ ++
Sbjct: 422 NSSASVQPIPAHSQPQVVSQTANQQPNVPSAVQQPLHTWQQSPSQ----ELQQAHTLQKG 477
Query: 364 SQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESESPRSGNNPQTSASASTIP--- 420
SQ ++AVS++QKQLHL TQN+EQQQNSHV ++ G+NPQT AS T+P
Sbjct: 478 SQSLKEAVSEIQKQLHLAPPPTQNLEQQQNSHVTTQQT-----GSNPQTVASTGTLPPAV 532
Query: 421 ---TVPQSPQVAASPE------CDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQI 471
V SP V AS E CDWSEH CPDG KYYYNCETCESRW+KPEEY+LF QQ+
Sbjct: 533 LPSIVSSSPAVCASSETADLLECDWSEHICPDGFKYYYNCETCESRWEKPEEYILFLQQL 592
Query: 472 EKQQKLQNGS---------QSVSSTKEVAQTQEVQLQPHVFRKKV 507
K Q+LQN S V ST++ QT+ V LQ + +K+
Sbjct: 593 PKHQQLQNPSGQQCQSPCHSQVLSTQQNFQTRIVPLQTELSHQKL 637
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 67 PFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKR 126
PF GRKR N+ D+ N+ KLYV VPRT TEEDIR LFEEHG ++EVVL KDKR
Sbjct: 69 PFSGRKRWLNNSGHDY-NEGVAFVKLYVGCVPRTVTEEDIRSLFEEHGKIVEVVLLKDKR 127
Query: 127 TGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
TGQQQ CFVK+ +EA AI+ALN PG A+IKVR+ADGERE
Sbjct: 128 TGQQQECCFVKYATMDEADRAIKALNNQRTLPGGVAAIKVRYADGERE 175
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISG 240
KLYVGC+ + ++++I +F +G I ++ +++D+ Q + C FV+++ + A AI
Sbjct: 92 KLYVGCVPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQECCFVKYATMDEADRAIKA 151
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPR 265
LN T+ G + VR AD ++ R
Sbjct: 152 LNNQRTLPGGVAAIKVRYADGERER 176
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KLYV + + A++ +I +F +G V ++ + +D Q +G FVK + + A AI A
Sbjct: 243 KLYVGYLNKQASKREIEEIFSPYGIVEDIFIVRDDMK-QSRGCGFVKLSNRDMAVAAINA 301
Query: 151 LNGHYIFPGEQASIKVRFADGER 173
LNG+Y+ G + VRFAD ++
Sbjct: 302 LNGNYVMRGCDQPLIVRFADPKK 324
>gi|356521753|ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 737
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/379 (44%), Positives = 226/379 (59%), Gaps = 27/379 (7%)
Query: 65 PMPFIGRKRGF-----NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV 119
P P G+KRGF +PDH+ D G AKL+V VPRTATEEDIRPLFEEHGNVIEV
Sbjct: 57 PPPLAGQKRGFPFSGRGGGSPDHL-DGGNFAKLFVGSVPRTATEEDIRPLFEEHGNVIEV 115
Query: 120 VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAP 179
L KDK+TGQ QG CF+K+ EEA AIRAL+ + PG I+VR+ADGERE A
Sbjct: 116 ALIKDKKTGQHQGCCFIKYATSEEADQAIRALHNQHTLPGGVGPIQVRYADGERERLGAV 175
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS 239
KL+VG L+KQ + KE+EE+FS YG +ED++++RDE KQSRGC FV++SHR+MALAAI+
Sbjct: 176 EYKLFVGSLNKQATVKEVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAIN 235
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRPPPNLGNSA 298
LNG +TMRG +QPL+VR ADPK+PR G+ RG AFG P FGP F P R P N+ +
Sbjct: 236 ALNGIYTMRGCEQPLIVRFADPKRPRQGDSRG-LAFGGPGFGPRFDAPGTRHPSNITDPM 294
Query: 299 GGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPII-----QQLHCSQQQSSSQL---- 349
G ++ P+ ++ P H N SN G +P++ L + L
Sbjct: 295 GDRMPPSNAWHPLHPPNMG---PSSNAGFHGMGSPLLPRSGDMALPTDAGGPMTSLGGPI 351
Query: 350 -SQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESESP---- 404
+ +Q I + +QN + + +Q+ Q Q+ ++ SH + ++ P
Sbjct: 352 DGRFQVQSIPMSQQNFNQPMPQIPPVNQQISPLQKPVQSSQELPPSHQLYPQAPVPYPQT 411
Query: 405 --RSGNNPQTSASASTIPT 421
R PQ S SA +P+
Sbjct: 412 SLRQHGQPQLSLSAGPLPS 430
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 9/104 (8%)
Query: 378 LHLRQSSTQNVEQQQ------NSHVIVSESESPRSGNNPQTSASASTIPTVPQSPQVAAS 431
L L+Q++ N +Q Q + + S + + + P ++ + S +P + Q+ A
Sbjct: 535 LTLQQNAEANKKQSQWAGPGPVAQTVASTLAAAPAADVPSSTPANSALPAINQN---MAL 591
Query: 432 PECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQIEKQQ 475
+C+W+EH P+G KYYYN T ESRW+KPEE L EQQ ++Q+
Sbjct: 592 VKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLHEQQKQQQR 635
>gi|357479035|ref|XP_003609803.1| FCA [Medicago truncatula]
gi|355510858|gb|AES92000.1| FCA [Medicago truncatula]
Length = 862
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/255 (57%), Positives = 180/255 (70%), Gaps = 7/255 (2%)
Query: 61 FNGQPMPFIGRKRGF----NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNV 116
FN P P G+KRGF +PDH +D G AKL+V VPRTATEEDIRPLFEEHGNV
Sbjct: 125 FNLPPPPLSGQKRGFPFSGRGASPDH-SDGGNFAKLFVGSVPRTATEEDIRPLFEEHGNV 183
Query: 117 IEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+EV L KD++TGQ QG CF+K+ EEA AIRAL+ + PG I+VR+ADGERE
Sbjct: 184 VEVALIKDRKTGQHQGCCFIKYATSEEADQAIRALHNRHTLPGGVGPIQVRYADGERERL 243
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
A KL+VG L+KQ S KE+EEVFS YG IED++++RD+ KQSRGC FV++SHR+MALA
Sbjct: 244 GAVEYKLFVGSLNKQASVKEVEEVFSKYGRIEDVYLMRDDQKQSRGCGFVKYSHRDMALA 303
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRPPPNLG 295
AI+ LNG +TMRG +QPL+VR ADPK+PR G+ RG AFG+ FGP P R P N
Sbjct: 304 AINALNGIYTMRGCEQPLIVRFADPKRPRQGDSRGP-AFGSAGFGPRLDSPGTRLPSNNS 362
Query: 296 NSAGGQILPNVSYRP 310
+ G I P ++RP
Sbjct: 363 DPMGDHIPPPNAWRP 377
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 12/112 (10%)
Query: 410 PQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQ 469
P ++ + S++ + Q+ + C+W+EH P+G KYYYN T ESRW+KPEE EQ
Sbjct: 646 PSSTPATSSVQPISQNTTLG---NCNWTEHLSPEGFKYYYNSVTGESRWEKPEELTSSEQ 702
Query: 470 QIEK-----QQKLQNGSQSVSSTKEVAQTQEVQLQPHVFRKKV---QLQDPS 513
Q + QQ G S+ T++VAQ Q+VQ Q H FR +V Q+Q PS
Sbjct: 703 QKQLLNQSVQQSQIQGQPSIPPTQQVAQNQQVQPQSH-FRGQVHHQQIQQPS 753
>gi|224112006|ref|XP_002316051.1| predicted protein [Populus trichocarpa]
gi|222865091|gb|EEF02222.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/290 (53%), Positives = 193/290 (66%), Gaps = 32/290 (11%)
Query: 70 GRKRGFNHPAPDHIN---------------------DSG------IPAKLYVAPVPRTAT 102
GRKRGF+ +P +N D G AKL+V VPRTAT
Sbjct: 41 GRKRGFHGSSPGKLNYVFLLSFLVQMLMNLYFADRFDGGGGRSGFAFAKLFVGSVPRTAT 100
Query: 103 EEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQA 162
E DIRPLFEEHGNVIEV L KDKRTGQQQG CF+K+ EEA AIRAL+ PG
Sbjct: 101 EMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKYATSEEADRAIRALHNQRTLPGGVG 160
Query: 163 SIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRG 222
I+VR+ADGERE A KL+VG L+KQ ++KE+EE+F+PYG +ED++++RDE+KQSRG
Sbjct: 161 PIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVEEIFTPYGRVEDVYLMRDEMKQSRG 220
Query: 223 CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR-TGELRGNYAFGTPSFG 281
C FV++SHR+MALAAI+GLNG +TMRG +QPL VR ADPK+PR G+ RG AFG+P G
Sbjct: 221 CGFVKYSHRDMALAAINGLNGIYTMRGCEQPLTVRFADPKRPRPGGDSRGGPAFGSPGAG 280
Query: 282 PNF-LEPVRPPPNLGNSAGGQILPN--VSYRPQHIFNNSHPQVFSNWGNQ 328
P F +RPPPNLG+ G I PN + PQ++ +S+ V +GNQ
Sbjct: 281 PRFQASGLRPPPNLGDPMGDHIPPNAWLPMSPQNMGPSSNAGV-HGFGNQ 329
>gi|60459259|gb|AAX20016.1| FCA gamma [Pisum sativum]
Length = 743
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/258 (56%), Positives = 178/258 (68%), Gaps = 7/258 (2%)
Query: 60 FFNGQPMPFIGRKRGF----NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGN 115
F N QP G+KRGF +PDH D G AKL+V VPRTATEEDIRPLFEEHGN
Sbjct: 58 FNNHQPPVMSGQKRGFPFSGRGASPDHF-DGGNFAKLFVGSVPRTATEEDIRPLFEEHGN 116
Query: 116 VIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
VIEV L KD++TGQ QG CF+K+ EEA AIRAL+ + PG I+VR+ADGERE
Sbjct: 117 VIEVALIKDRKTGQHQGCCFIKYATSEEADQAIRALHNQHTLPGGVGPIQVRYADGERER 176
Query: 176 PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMAL 235
A KL+VG L+KQ KE+EEVFS YG +ED++++RD+ KQSRGC FV++SHR+MAL
Sbjct: 177 LGAVEYKLFVGSLNKQALVKEVEEVFSKYGRVEDVYLMRDDKKQSRGCGFVKYSHRDMAL 236
Query: 236 AAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRPPPNL 294
AAI+GLNG +TMRG DQPL+VR ADPK+PR G+ RG G FGP P R P N
Sbjct: 237 AAINGLNGIYTMRGCDQPLIVRFADPKRPRQGDSRGP-VLGAAGFGPRLDAPGTRLPSNN 295
Query: 295 GNSAGGQILPNVSYRPQH 312
+ G ++ P ++RP H
Sbjct: 296 SDPMGDRMPPPNAWRPIH 313
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 374 MQKQLHLRQSSTQNVEQQQNSHVIVSESESPRSGNNPQTSASASTIPTVPQSPQVAASPE 433
M Q H + TQ+ SH + + P ++A+ S++ + Q+ + P+
Sbjct: 548 MTLQHHAEATKTQSQWGGPVSHAATGAHVAAPAAGTPSSTAATSSVQAISQNTTL---PK 604
Query: 434 CDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQ-----IEKQQKLQNGSQSVSSTK 488
C+W+EH P+G KYYYN T ESRW+KPEE LF QQ QQ S+ T+
Sbjct: 605 CNWTEHLSPEGFKYYYNSVTGESRWEKPEELTLFGQQKRQHSQSDQQSQNQSQPSIPPTQ 664
Query: 489 EVAQTQEVQLQPHVFRK 505
++AQ Q+V+ Q H FR+
Sbjct: 665 QIAQNQQVKPQSH-FRE 680
>gi|255556436|ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
gi|223541567|gb|EEF43116.1| Flowering time control protein FCA, putative [Ricinus communis]
Length = 811
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 183/246 (74%), Gaps = 7/246 (2%)
Query: 70 GRKRGF----NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDK 125
G+KRGF +PDH + G AKL+V VPRTA+EEDIRPLFE+HGNVIEV L KDK
Sbjct: 138 GQKRGFPFSGRGNSPDHT-ECGSFAKLFVGSVPRTASEEDIRPLFEQHGNVIEVALIKDK 196
Query: 126 RTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYV 185
RTGQQQG CFVK+ EEA AIRAL+ + PG I+VRFADGERE A KL+V
Sbjct: 197 RTGQQQGCCFVKYATSEEADRAIRALHNQHTLPGGIGPIQVRFADGERERLGAVEYKLFV 256
Query: 186 GCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
G L+KQ ++KE+EE+FSPYGH+ED++++RDE+KQSRGC FV++S REMALAAI+ LNG +
Sbjct: 257 GSLNKQATEKEVEEIFSPYGHVEDVYLMRDEMKQSRGCGFVKYSSREMALAAINALNGIY 316
Query: 246 TMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPV-RPPPNLGNSAGGQILP 304
MRG DQPL VR ADPK+PR G+ RG AFG P FGP F P R PPN G++ G ++ P
Sbjct: 317 KMRGCDQPLTVRFADPKRPRPGDSRGGPAFGGPGFGPRFQAPGPRLPPNFGDAVGDRVPP 376
Query: 305 NVSYRP 310
+ ++RP
Sbjct: 377 S-AWRP 381
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 436 WSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
W+EHT P+G KYYYN T ESRW+KPEE LFE
Sbjct: 649 WTEHTSPEGFKYYYNSVTRESRWEKPEELTLFE 681
>gi|356571003|ref|XP_003553671.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 461
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 239/430 (55%), Gaps = 79/430 (18%)
Query: 71 RKRGFNH----PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKR 126
RKR ++H +PD ++ + K+YVAPVPRTATE++I +FEEHG ++E+VL K K+
Sbjct: 53 RKRPWHHSNNGTSPDQVD---VSCKVYVAPVPRTATEDEICTVFEEHGTIVEIVLLKHKK 109
Query: 127 TGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH----------- 175
TG +QG CFVK+ F+EA AI+ALN Y F GE + V+FAD E E
Sbjct: 110 TGTRQGSCFVKYATFDEADRAIKALNNKYTFAGESYPVVVKFADRELERLGVRGFCRNME 169
Query: 176 ---PVAP-PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHR 231
P+ DK++V ++K+ + KEIE++FSPYGH+EDIF K + G F +S
Sbjct: 170 KKDPLEEVADKVFVSSINKEATNKEIEDIFSPYGHVEDIF-----FKSTHGIVFTFYS-- 222
Query: 232 EMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEP-VRP 290
R RGN+ +FGP EP V P
Sbjct: 223 ---------------------------------RASFFRGNFLSVNANFGPCSQEPAVWP 249
Query: 291 PPNLGNSA-GGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQL 349
PN G+S GG ILP+ Y + +HPQV S+ N E ++Q QQ +
Sbjct: 250 LPNFGDSNNGGIILPHAPYHS----SIAHPQVTSHMQNWEPGATVLQHPF-PPQQVHPHV 304
Query: 350 SQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESESPRSGNN 409
+ + L IQ P+ +SQ ++++ +Q H SS QN+EQQ +S + S++ES N
Sbjct: 305 ASMPLGSIQAPKLSSQ---PFITEVPRQSHPADSSVQNIEQQLSSQ-LPSQTES-----N 355
Query: 410 PQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQ 469
P T + T+P +P SPQ PECDWSEH CPDG+KYYYNC TCESRWDKPEEY L+E+
Sbjct: 356 PST-VTGITLPDMPTSPQDEDFPECDWSEHYCPDGDKYYYNCITCESRWDKPEEYALYEK 414
Query: 470 QIEKQQKLQN 479
+ +KQQ+ ++
Sbjct: 415 ESQKQQERED 424
>gi|293333224|ref|NP_001169298.1| uncharacterized protein LOC100383162 [Zea mays]
gi|224028499|gb|ACN33325.1| unknown [Zea mays]
gi|414588978|tpg|DAA39549.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 735
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 164/222 (73%), Gaps = 3/222 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VPRTATEED+RPLFEEHG+V+EV L KD++TG+QQG CFVK+ EEA AIR
Sbjct: 123 KLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYATSEEAERAIRG 182
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ HY PG I+VR+ADGERE A KL+V L+KQ + KEIEE+F+PYGH+ED+
Sbjct: 183 LHNHYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATPKEIEEIFAPYGHVEDV 242
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
+I+RD +KQSRGC FV+FS +E A+ A++ L+GT+TMRG +QPL++R ADPK+PR GE R
Sbjct: 243 YIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTMRGCEQPLIIRFADPKRPRPGESR 302
Query: 271 GNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRP 310
G AFG P F P + +RP NL S G +LP S+RP
Sbjct: 303 GRPAFGGPGFSPRSDAALVIRPTANLDESRGQHMLPE-SWRP 343
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 429 AASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
A S C+W+EHT P+G KYYYN T ES+W+KPEEY+L+E
Sbjct: 611 AVSSTCNWTEHTSPEGFKYYYNSITRESKWEKPEEYVLYE 650
>gi|118485698|gb|ABK94699.1| unknown [Populus trichocarpa]
Length = 247
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/219 (61%), Positives = 162/219 (73%), Gaps = 12/219 (5%)
Query: 40 YHSHHRRHYQYD---QMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAP 96
+++H+ HY YD QMS E + F G GRKRG H + D G+ AKLY+AP
Sbjct: 29 FNNHNHSHYNYDSNQQMSGEANEPFIGGLFRPNGRKRGRFHSSD--YGDGGVNAKLYIAP 86
Query: 97 VPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
+PRT TEE+IR LFEEHG+V+EVVLP+DKRTGQQQ YCFVK+ FEEA AIRAL+ +
Sbjct: 87 IPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRALHNQHT 146
Query: 157 FPGEQASIKVRFADGEREHPVAP-------PDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
PGE A KVR+ADGERE PVA DKLYVG ++K SK+EIEE+FSPYGH+ED
Sbjct: 147 IPGEVAPFKVRYADGERERPVARCSMVGGFVDKLYVGSINKLASKQEIEEIFSPYGHVED 206
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
++I RDELKQSRGCAFV+F+HR+MALAAI GLNGT TMR
Sbjct: 207 VYIARDELKQSRGCAFVKFAHRDMALAAIKGLNGTLTMR 245
>gi|414588979|tpg|DAA39550.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 708
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 164/222 (73%), Gaps = 3/222 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VPRTATEED+RPLFEEHG+V+EV L KD++TG+QQG CFVK+ EEA AIR
Sbjct: 123 KLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYATSEEAERAIRG 182
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ HY PG I+VR+ADGERE A KL+V L+KQ + KEIEE+F+PYGH+ED+
Sbjct: 183 LHNHYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATPKEIEEIFAPYGHVEDV 242
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
+I+RD +KQSRGC FV+FS +E A+ A++ L+GT+TMRG +QPL++R ADPK+PR GE R
Sbjct: 243 YIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTMRGCEQPLIIRFADPKRPRPGESR 302
Query: 271 GNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRP 310
G AFG P F P + +RP NL S G +LP S+RP
Sbjct: 303 GRPAFGGPGFSPRSDAALVIRPTANLDESRGQHMLPE-SWRP 343
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 429 AASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
A S C+W+EHT P+G KYYYN T ES+W+KPEEY+L+E
Sbjct: 584 AVSSTCNWTEHTSPEGFKYYYNSITRESKWEKPEEYVLYE 623
>gi|283838931|gb|ADB44797.1| FCA [Vitis vinifera]
Length = 281
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/190 (64%), Positives = 149/190 (78%), Gaps = 1/190 (0%)
Query: 79 APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKF 138
+PD + G AKL+V VPRTATEEDIRPLFEEHGNV+EV L KDKRTGQQQG CF+K+
Sbjct: 92 SPDRYDGGGF-AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKY 150
Query: 139 TIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIE 198
EEA AIRAL+ Y PG I+VR+ADGERE A KL+VG L+KQ ++KE++
Sbjct: 151 ATSEEAERAIRALHNQYTLPGGVGPIEVRYADGERERLGAVEYKLFVGSLNKQATEKEVK 210
Query: 199 EVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
E+FSPYG +ED++++RDELKQSRGC FV FSHR+MA+AAI+ LNG +TM+G DQPL VR
Sbjct: 211 EIFSPYGQVEDVYLMRDELKQSRGCGFVNFSHRDMAMAAINALNGIYTMKGCDQPLTVRF 270
Query: 259 ADPKKPRTGE 268
ADPK+PR GE
Sbjct: 271 ADPKRPRPGE 280
>gi|32482116|gb|AAP84410.1| FCA protein [Triticum aestivum]
Length = 707
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 173/248 (69%), Gaps = 5/248 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 94 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 152
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 153 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 212
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 213 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 272
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP + ++
Sbjct: 273 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSL-SSMA 330
Query: 319 PQVFSNWG 326
P F+N+G
Sbjct: 331 PHQFNNFG 338
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W++HT P+G KYYYN T ES+W
Sbjct: 565 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTKHTSPEGFKYYYNSITRESKW 622
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 623 EKPEEYILYEQQ-QQHQKL 640
>gi|449460564|ref|XP_004148015.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449522952|ref|XP_004168489.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 307
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 148/308 (48%), Positives = 195/308 (63%), Gaps = 12/308 (3%)
Query: 94 VAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNG 153
V P + IRPLFE HG+++E+V+ +DK TGQQQG CFVK++ EA AIRAL+
Sbjct: 2 VVPFHKFEWNVSIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDN 61
Query: 154 HYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIV 213
Y FPGE I V++AD E++ + +KLYVGCL+K T+K+EIEEVFSPYG +EDI+I+
Sbjct: 62 QYTFPGELTPINVKYADSEKDR-LGVLEKLYVGCLNKNTTKREIEEVFSPYGFVEDIYII 120
Query: 214 RDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNY 273
RD+LKQSRG AFV+++ R+MALAAI LNG FTMRG DQPL+VR+ADPKKPR GE R
Sbjct: 121 RDDLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSTN 180
Query: 274 AFGTPSFGPNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATP 333
G+P FG + +P RP P +G + G PN SY Q + P N + TP
Sbjct: 181 VSGSPRFG-HHPQPFRPEPPVGPAGG--CFPNNSYPGQQNSTSLGPP--RNASQVASHTP 235
Query: 334 I----IQQLHCSQQQSSSQLSQLSLQQIQIPRQNSQ-LSQQAVSDMQKQLHLRQSSTQNV 388
+Q+ Q+ SS +Q+S Q ++ +Q Q +Q S MQ Q+ L Q Q+
Sbjct: 236 FAPNSMQKPSPQTQEPSSSFAQMSSQPMRSTQQVFQPPTQTDFSKMQNQV-LGQQPRQDS 294
Query: 389 EQQQNSHV 396
QQQN V
Sbjct: 295 HQQQNLQV 302
>gi|302819965|ref|XP_002991651.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
gi|300140500|gb|EFJ07222.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
Length = 480
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 162/420 (38%), Positives = 226/420 (53%), Gaps = 51/420 (12%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY---CFVKFTIFEEAGN 146
KL+V VPRT TE+ +R +FEE+G V+EV + KD+RTG QQG CFVK++ +EA
Sbjct: 42 VKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADR 101
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPV-APPDKLYVGCLSKQTSKKEIEEVFSPYG 205
AIR LN PG + ++VR+ADGERE A KL+VGCL+K S++EIEEVFSPYG
Sbjct: 102 AIRCLNNQRTLPGGASPVQVRYADGERERLAGAIEHKLFVGCLNKHASEREIEEVFSPYG 161
Query: 206 HIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++DI+++RDE KQSRGCAF+++ R+MA AAI+ LN + MRG DQPL VR ADPK+P+
Sbjct: 162 RVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDVYIMRGCDQPLAVRFADPKRPK 221
Query: 266 TGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH------- 318
TG+ R +++ G N N + G+ P VS+R + +
Sbjct: 222 TGDSRNSFSPRHHGSGSN---------NRSSGHSGRASP-VSWRQANALSLRQLHQTGQP 271
Query: 319 ---PQVFSNWGNQEAATP-------IIQ-QLHCSQQQSSSQLSQLSLQQIQIPRQNSQLS 367
P V + A+P ++Q Q H + + ++ Q +LQ+ Q
Sbjct: 272 PFPPAVIPCLSPSQTASPNHSQGPYVVQPQRHHAAGLPTEEIIQTALQRAGQNFAGQQAV 331
Query: 368 QQAVSDMQKQ-----------LHLRQS-STQNVEQQQNSHVIVS----ESESPRSGNNPQ 411
Q V + Q LH Q+ QN+ QQQ + + P +
Sbjct: 332 HQYVQLLLTQPLASINQPSLILHNHQALHLQNIPQQQQHPPVFQPGSIAQQPPSWLLSAP 391
Query: 412 TSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQI 471
T S +PT P V A +W+EH PDG KYYYN T ES+W+KP+E EQQ+
Sbjct: 392 TQLVQSLLPTPALPPAVVAPTTSNWTEHVSPDGYKYYYNSITSESKWEKPDE---LEQQV 448
>gi|32482090|gb|AAP84398.1| FCA protein [Triticum aestivum]
Length = 719
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 173/249 (69%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 96 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 154
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 155 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 214
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 215 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 274
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 275 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 332
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 333 PHQFNNFGS 341
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 566 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 623
Query: 459 DKPEEYLLFEQQIEKQQKLQNGSQSV 484
+KPEEY+L+EQQ +K LQ Q +
Sbjct: 624 EKPEEYILYEQQHQKLILLQQHQQKL 649
>gi|32482125|gb|AAP84413.1| FCA protein, partial [Triticum aestivum]
Length = 722
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 173/249 (69%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 106 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 164
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 165 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 224
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 225 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 284
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 285 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 342
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 343 PHRFNNFGS 351
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C W+EHT P+G KYYYN T +S+W
Sbjct: 576 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CSWTEHTSPEGFKYYYNSITRKSKW 633
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 634 EKPEEYILYEQQ-QQHQKL 651
>gi|357155243|ref|XP_003577055.1| PREDICTED: flowering time control protein FCA-like [Brachypodium
distachyon]
Length = 749
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 188/315 (59%), Gaps = 34/315 (10%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLF +HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 119 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFADHGDVLEVALIRDRKTGEQQGCCFVKYAT 177
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 178 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 237
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
FSP+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 238 FSPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYVMRGCEQPLIVRFAD 297
Query: 261 PKKPRTGELRGNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRPQ------- 311
PK+PR GE RG AFG P P + +RP NL G + P+ S+ P
Sbjct: 298 PKRPRPGESRGGPAFGGPGVSPRSDAALVIRPTANLDEPRGRHMPPD-SWHPSSPNSMAP 356
Query: 312 HIFNNS----------------------HPQVFSNWGNQEAATPIIQQLHCSQQQSSSQL 349
H FNN+ PQ+F G+ T + H S SQ
Sbjct: 357 HQFNNNFGSDNHMGLMGGSVASADNAAFRPQMFHGNGSLSTQTALPTSSHMGMNPSISQG 416
Query: 350 SQLSLQQIQIPRQNS 364
L QQI +P Q +
Sbjct: 417 HHLGGQQI-LPLQKA 430
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 9/58 (15%)
Query: 414 ASASTIPT----VPQSPQV---AASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEY 464
A A+ +PT +PQ QV A S C+W+EHT P+G KYYYN T ES+W+KPEEY
Sbjct: 600 ALAAVVPTNINAIPQ--QVNSSAVSLTCNWTEHTSPEGFKYYYNSMTRESKWEKPEEY 655
>gi|32482147|gb|AAP84419.1| FCA-B2 [Triticum aestivum]
Length = 740
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 169/248 (68%), Gaps = 11/248 (4%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 114 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 172
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 173 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 232
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 233 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 292
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ------- 311
PK+PR GE RG AFG P + +RP NL G + P+ S+RP
Sbjct: 293 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMAP 351
Query: 312 HIFNNSHP 319
H FNN P
Sbjct: 352 HQFNNFGP 359
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP A S C+W+EHT P+G KYYYN T ES+W
Sbjct: 585 PVQSNTPGAPAAMMTTKINAIPQQVNSP--AVSLICNWTEHTSPEGFKYYYNSITRESKW 642
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 643 EKPEEYILYEQQ-QHHQKL 660
>gi|32482081|gb|AAP84396.1| FCA protein [Triticum aestivum]
Length = 719
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 173/249 (69%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 108 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 166
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 167 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 226
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 227 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 286
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 287 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 344
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 345 PHQFNNFGS 353
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP A S C+W+EHT P+G KYYYN T ES+W
Sbjct: 579 PVQSNTPGAPAAMMTTKINAIPQQVISP--AVSLICNWTEHTSPEGFKYYYNSITRESKW 636
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 637 EKPEEYILYEQQ-QHHQKL 654
>gi|2204089|emb|CAB05388.1| FCA gamma [Arabidopsis thaliana]
gi|57169178|gb|AAW38964.1| FCA [Arabidopsis thaliana]
Length = 747
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 15/280 (5%)
Query: 33 RHNFPDNY---HSHHRRHYQYDQMSSEPTDFFNGQPM--PFIGRKRGFNHPAPDH----- 82
R+N+P Y S RR + M S+ + P+ P G+KRG+ P DH
Sbjct: 53 RYNYPAKYPPSESPDRRRFIGKAMESDYSVRPTTPPVQQPLSGQKRGY--PISDHGSFTG 110
Query: 83 --INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
++D KL+V VPRTATEE+IRP FE+HGNV+EV L KDKRTGQQQG CFVK+
Sbjct: 111 TDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
++A AIRAL+ PG ++VR+ADGERE KL+VG L+KQ ++KE+EE+
Sbjct: 171 SKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F +GH+ED++++RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+
Sbjct: 231 FLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAE 290
Query: 261 PKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
PK+P+ GE R GP F RP N G+S+G
Sbjct: 291 PKRPKPGESRDMAPPVGLGSGPRFQASGPRPTSNFGDSSG 330
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 336 QQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSH 395
QQ Q S+L+QL QQ Q + Q SQQA+S +Q+Q+ Q QN+ QN
Sbjct: 494 QQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGR 553
Query: 396 VIVSE---SESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCE 452
+ S PR + ++ + P Q S +C W+EHT PDG KYYYN
Sbjct: 554 AGKQQWAGSAIPRVASTTGSTPVSYVQTAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGL 613
Query: 453 TCESRWDKPEEYLLFEQ 469
T ES+W+KPEE ++FE+
Sbjct: 614 TGESKWEKPEEMIVFER 630
>gi|32482067|gb|AAP84390.1| FCA protein [Triticum aestivum]
Length = 735
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 173/249 (69%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 110 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 168
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 169 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEYKLFVASLNKQATAKEIEEI 228
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 229 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 288
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 289 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 346
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 347 PHQFNNFGS 355
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 580 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 637
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 638 EKPEEYILYEQQ-QQHQKL 655
>gi|32482140|gb|AAP84416.1| FCA protein, partial [Triticum aestivum]
Length = 740
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 173/249 (69%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 112 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 171 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 231 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 290
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 291 PKRPRPGEPRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 348
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 349 PHQFNNFGS 357
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST-----IPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T IP SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 585 PVQSNTPGAPAAMMTTKLNAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 642
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 643 EKPEEYVLYEQQ-QQHQKL 660
>gi|32482149|gb|AAP84420.1| FCA-D1 [Triticum aestivum]
Length = 659
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 173/249 (69%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFV++
Sbjct: 31 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVEYAT 89
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 90 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 149
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 150 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 209
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 210 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 267
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 268 PHQFNNFGS 276
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST-----IPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T IP SP V+ + C+ +EHT P+G KYYYN T ES+W
Sbjct: 504 PVQSNTPGAPAAMMTTKLNAIPQQVNSPAVSLT--CNLTEHTSPEGFKYYYNSITRESKW 561
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 562 EKPEEYVLYEQQ-QQHQKL 579
>gi|186511879|ref|NP_849543.2| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658325|gb|AEE83725.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 747
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 15/280 (5%)
Query: 33 RHNFPDNY---HSHHRRHYQYDQMSSEPTDFFNGQPM--PFIGRKRGFNHPAPDH----- 82
R+N+P Y S RR + M S+ + P+ P G+KRG+ P DH
Sbjct: 53 RYNYPAKYPPSESPDRRRFIGKAMESDYSVRPTTPPVQQPLSGQKRGY--PISDHGSFTG 110
Query: 83 --INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
++D KL+V VPRTATEE+IRP FE+HGNV+EV L KDKRTGQQQG CFVK+
Sbjct: 111 TDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
++A AIRAL+ PG ++VR+ADGERE KL+VG L+KQ ++KE+EE+
Sbjct: 171 SKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F +GH+ED++++RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+
Sbjct: 231 FLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAE 290
Query: 261 PKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
PK+P+ GE R GP F RP N G+S+G
Sbjct: 291 PKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSG 330
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 336 QQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSH 395
QQ Q S+L+QL QQ Q + Q SQQA+S +Q+Q+ Q QN+ QN
Sbjct: 494 QQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGR 553
Query: 396 VIVSE---SESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCE 452
+ S PR + ++ + P Q S +C W+EHT PDG KYYYN
Sbjct: 554 AGKQQWAGSAIPRVASTTGSTPVSYVQTAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGL 613
Query: 453 TCESRWDKPEEYLLFEQ 469
T ES+W+KPEE ++FE+
Sbjct: 614 TGESKWEKPEEMIVFER 630
>gi|334302803|sp|O04425.2|FCA_ARATH RecName: Full=Flowering time control protein FCA
gi|2244986|emb|CAB10407.1| FCA gamma protein [Arabidopsis thaliana]
gi|7268377|emb|CAB78670.1| FCA gamma protein [Arabidopsis thaliana]
Length = 747
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 15/280 (5%)
Query: 33 RHNFPDNY---HSHHRRHYQYDQMSSEPTDFFNGQPM--PFIGRKRGFNHPAPDH----- 82
R+N+P Y S RR + M S+ + P+ P G+KRG+ P DH
Sbjct: 53 RYNYPAKYPPSESPDRRRFIGKAMESDYSVRPTTPPVQQPLSGQKRGY--PISDHGSFTG 110
Query: 83 --INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
++D KL+V VPRTATEE+IRP FE+HGNV+EV L KDKRTGQQQG CFVK+
Sbjct: 111 TDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
++A AIRAL+ PG ++VR+ADGERE KL+VG L+KQ ++KE+EE+
Sbjct: 171 SKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F +GH+ED++++RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+
Sbjct: 231 FLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAE 290
Query: 261 PKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
PK+P+ GE R GP F RP N G+S+G
Sbjct: 291 PKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSG 330
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 336 QQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSH 395
QQ Q S+L+QL QQ Q + Q SQQA+S +Q+Q+ Q QN+ QN
Sbjct: 494 QQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGR 553
Query: 396 VIVSE---SESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCE 452
+ S PR + ++ + P Q S +C W+EHT PDG KYYYN
Sbjct: 554 AGKQQWAGSAIPRVASTTGSTPVSYVQTAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGL 613
Query: 453 TCESRWDKPEEYLLFEQ 469
T ES+W+KPEE ++FE+
Sbjct: 614 TGESKWEKPEEMIVFER 630
>gi|2204095|emb|CAB05391.1| FCA gamma [Arabidopsis thaliana]
Length = 747
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 15/280 (5%)
Query: 33 RHNFPDNY---HSHHRRHYQYDQMSSEPTDFFNGQPM--PFIGRKRGFNHPAPDH----- 82
R+N+P Y S RR + M S+ + P+ P G+KRG+ P DH
Sbjct: 53 RYNYPAKYPPSESPDRRRFIGKAMESDYSVRPTTPPVQQPLSGQKRGY--PISDHGSFTG 110
Query: 83 --INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
++D KL+V VPRTATEE+IRP FE+HGNV+EV L KDKRTGQQQG CFVK+
Sbjct: 111 TDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
++A AIRAL+ PG ++VR+ADGERE KL+VG L+KQ ++KE+EE+
Sbjct: 171 SKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F +GH+ED++++RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+
Sbjct: 231 FLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAE 290
Query: 261 PKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
PK+P+ GE R GP F RP N G+S+G
Sbjct: 291 PKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSG 330
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 336 QQLHCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSH 395
QQ Q S+L+QL QQ Q + Q SQQA+S +Q+Q+ Q QN+ QN
Sbjct: 494 QQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGR 553
Query: 396 VIVSE---SESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCE 452
+ S PR + ++ + P Q S +C W+EHT PDG KYYYN
Sbjct: 554 AGKQQWAGSAIPRVASTTGSTPVSYVQTAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGL 613
Query: 453 TCESRWDKPEEYLLFEQ 469
T ES+W+KPEE ++FE+
Sbjct: 614 TGESKWEKPEEMIVFER 630
>gi|2204091|emb|CAB05389.1| FCA delta [Arabidopsis thaliana]
Length = 533
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 15/280 (5%)
Query: 33 RHNFPDNY---HSHHRRHYQYDQMSSEPTDFFNGQPM--PFIGRKRGFNHPAPDH----- 82
R+N+P Y S RR + M S+ + P+ P G+KRG+ P DH
Sbjct: 53 RYNYPAKYPPSESPDRRRFIGKAMESDYSVRPTTPPVQQPLSGQKRGY--PISDHGSFTG 110
Query: 83 --INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
++D KL+V VPRTATEE+IRP FE+HGNV+EV L KDKRTGQQQG CFVK+
Sbjct: 111 TDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
++A AIRAL+ PG ++VR+ADGERE KL+VG L+KQ ++KE+EE+
Sbjct: 171 SKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F +GH+ED++++RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+
Sbjct: 231 FLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAE 290
Query: 261 PKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
PK+P+ GE R GP F RP N G+S+G
Sbjct: 291 PKRPKPGESRDMAPPVGLGSGPRFQASGPRPTSNFGDSSG 330
>gi|32482390|gb|AAP84384.1| FCA protein [Triticum aestivum]
Length = 737
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 113 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 171
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 172 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 231
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 232 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 291
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 292 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQTGRHMPPD-SWRPSSP-SSMAP 349
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 350 HQFNNFGS 357
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Query: 417 STIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQIEKQQK 476
+ IP SP V+ + C+W+EHT P+G KYYYN T ES+W+KPEEY+L+EQQ ++ QK
Sbjct: 600 NAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSMTRESKWEKPEEYILYEQQ-QQHQK 656
Query: 477 L 477
L
Sbjct: 657 L 657
>gi|186511881|ref|NP_193363.4| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658326|gb|AEE83726.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 533
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 15/280 (5%)
Query: 33 RHNFPDNY---HSHHRRHYQYDQMSSEPTDFFNGQPM--PFIGRKRGFNHPAPDH----- 82
R+N+P Y S RR + M S+ + P+ P G+KRG+ P DH
Sbjct: 53 RYNYPAKYPPSESPDRRRFIGKAMESDYSVRPTTPPVQQPLSGQKRGY--PISDHGSFTG 110
Query: 83 --INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
++D KL+V VPRTATEE+IRP FE+HGNV+EV L KDKRTGQQQG CFVK+
Sbjct: 111 TDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
++A AIRAL+ PG ++VR+ADGERE KL+VG L+KQ ++KE+EE+
Sbjct: 171 SKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F +GH+ED++++RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+
Sbjct: 231 FLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAE 290
Query: 261 PKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
PK+P+ GE R GP F RP N G+S+G
Sbjct: 291 PKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSG 330
>gi|32482074|gb|AAP84393.1| FCA protein [Triticum aestivum]
Length = 724
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 100 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 158
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 159 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 218
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 219 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 278
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 279 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 336
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 337 HQFNNFGS 344
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 569 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 626
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 627 EKPEEYILYEQQ-QQHQKL 644
>gi|32482085|gb|AAP84397.1| FCA protein [Triticum aestivum]
Length = 740
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 168/244 (68%), Gaps = 11/244 (4%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG AKL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+T
Sbjct: 116 HDNKSGY-AKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYTTS 174
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 175 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 234
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+V ADP
Sbjct: 235 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVLFADP 294
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ-------H 312
K+PR GE RG AFG P + +RP NL G + P+ S+RP H
Sbjct: 295 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMAPH 353
Query: 313 IFNN 316
FNN
Sbjct: 354 QFNN 357
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 585 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLA--CNWTEHTSPEGFKYYYNSITRESKW 642
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 643 EKPEEYILYEQQ-QQYQKL 660
>gi|32482381|gb|AAP84380.1| FCA protein [Triticum aestivum]
Length = 721
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 170/249 (68%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 96 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQGCCFVKYAT 154
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 155 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 214
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA+ L+GT+ MRG +QPL+VR AD
Sbjct: 215 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMDSLSGTYIMRGCEQPLIVRFAD 274
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G P+ S+RP ++
Sbjct: 275 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHTPPD-SWRPSSP-SSMA 332
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 333 PHQFNNFGS 341
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 566 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 623
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 624 EKPEEYILYEQQ-QQHQKL 641
>gi|2204096|emb|CAB05392.1| FCA delta [Arabidopsis thaliana]
gi|5302786|emb|CAB46035.1| FCA delta protein [Arabidopsis thaliana]
gi|7268378|emb|CAB78671.1| FCA delta protein [Arabidopsis thaliana]
Length = 533
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 15/280 (5%)
Query: 33 RHNFPDNY---HSHHRRHYQYDQMSSEPTDFFNGQPM--PFIGRKRGFNHPAPDH----- 82
R+N+P Y S RR + M S+ + P+ P G+KRG+ P DH
Sbjct: 53 RYNYPAKYPPSESPDRRRFIGKAMESDYSVRPTTPPVQQPLSGQKRGY--PISDHGSFTG 110
Query: 83 --INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
++D KL+V VPRTATEE+IRP FE+HGNV+EV L KDKRTGQQQG CFVK+
Sbjct: 111 TDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
++A AIRAL+ PG ++VR+ADGERE KL+VG L+KQ ++KE+EE+
Sbjct: 171 SKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F +GH+ED++++RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+
Sbjct: 231 FLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAE 290
Query: 261 PKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
PK+P+ GE R GP F RP N G+S+G
Sbjct: 291 PKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSG 330
>gi|32482123|gb|AAP84412.1| FCA protein, partial [Triticum aestivum]
Length = 737
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 113 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 171
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 172 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 231
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 232 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 291
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 292 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 349
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 350 HQFNNFGS 357
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+++ C+W+EHT P+G KYYYN T ES+W
Sbjct: 582 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSST--CNWTEHTSPEGFKYYYNSITRESKW 639
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 640 EKPEEYILYEQQ-QQHQKL 657
>gi|32482108|gb|AAP84406.1| FCA protein [Triticum aestivum]
Length = 724
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 100 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 158
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 159 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 218
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 219 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 278
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 279 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 336
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 337 HQFNNFGS 344
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 569 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 626
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 627 EKPEEYILYEQQ-QQHQKL 644
>gi|32482059|gb|AAP84387.1| FCA protein [Triticum aestivum]
Length = 728
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 172/249 (69%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 103 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 161
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + L+V L+KQ + KEIEE+
Sbjct: 162 SEEAERAIRALHNQCTLPGAMGPVQVRYADGEKERHGSIEHILFVASLNKQATAKEIEEI 221
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 222 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 281
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 282 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 339
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 340 PHQFNNFGS 348
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 573 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 630
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 631 EKPEEYILYEQQ-QQHQKL 648
>gi|32482079|gb|AAP84395.1| FCA protein [Triticum aestivum]
Length = 734
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 110 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 168
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 169 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 228
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPLVVR ADP
Sbjct: 229 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLVVRFADP 288
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 289 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 346
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 347 HQFNNFGS 354
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 579 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 636
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 637 EKPEEYILYEQQ-QQHQKL 654
>gi|32482114|gb|AAP84409.1| FCA protein [Triticum aestivum]
Length = 736
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 112 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 170
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 171 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 230
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 231 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 290
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 291 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 348
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 349 HQFNNFGS 356
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 581 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 638
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 639 EKPEEYILYEQQ-QQHQKL 656
>gi|32482061|gb|AAP84388.1| FCA protein [Triticum aestivum]
Length = 737
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 113 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 171
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AI+AL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 172 EEAERAIKALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 231
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC F +FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 232 APFGHVEDVYIMKDGMRQSRGCGFAKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 291
Query: 262 KKPRTGELRGNYAFGTPSFGPNFLEP--VRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P F +RP NL G + P+ S+RP ++ P
Sbjct: 292 KRPRPGESRGGPAFGGPGVSSRFDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 349
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 350 HQFNNFGS 357
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 582 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 639
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 640 EKPEEYILYEQQ-QQHQKL 657
>gi|32482142|gb|AAP84417.1| FCA-A1 [Triticum aestivum]
gi|32482144|gb|AAP84418.1| FCA-A2 [Triticum aestivum]
Length = 741
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 117 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 175
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 176 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 235
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 236 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 295
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 296 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 353
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 354 HQFNNFGS 361
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 586 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 643
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 644 EKPEEYILYEQQ-QQHQKL 661
>gi|32482094|gb|AAP84400.1| FCA protein [Triticum aestivum]
Length = 737
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 112 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 170
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 171 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 230
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 231 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 290
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 291 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 348
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 349 HQFNNFGS 356
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 582 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 639
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 640 EKPEEYILYEQQ-QHHQKL 657
>gi|32482102|gb|AAP84403.1| FCA protein [Triticum aestivum]
Length = 730
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 106 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 164
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA IRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 165 EEAERVIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 224
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 225 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 284
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G I P+ S+RP ++ P
Sbjct: 285 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHIPPD-SWRPSSP-SSMAP 342
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 343 HQFNNFGS 350
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 575 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 632
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 633 EKPEEYILYEQQ-QQHQKL 650
>gi|32482096|gb|AAP84401.1| FCA protein [Triticum aestivum]
Length = 735
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 111 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 169
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 170 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIGHKLFVASLNKQATAKEIEEIF 229
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 230 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 289
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 290 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 347
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 348 HQFNNFGS 355
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 580 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTPPEGFKYYYNSITRESKW 637
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 638 EKPEEYILYEQQ-QQHQKL 655
>gi|32482383|gb|AAP84381.1| FCA protein [Triticum aestivum]
Length = 737
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 171/249 (68%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 112 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 170
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEI E+
Sbjct: 171 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIGEI 230
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA + L+GT+ MRG +QPL+VR AD
Sbjct: 231 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAATNSLSGTYIMRGCEQPLIVRFAD 290
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 291 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 348
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 349 PHQFNNFGS 357
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 582 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 639
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 640 EKPEEYILYEQQ-QQHQKL 657
>gi|32482065|gb|AAP84389.1| FCA protein [Triticum aestivum]
Length = 739
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 116 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 174
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 175 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 234
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED+++++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 235 APFGHVEDVYVMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 294
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 295 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 352
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 353 HQFNNFGS 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 585 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 642
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 643 EKPEEYILYEQQ--QHQKL 659
>gi|32482110|gb|AAP84407.1| FCA protein [Triticum aestivum]
Length = 736
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 168/248 (67%), Gaps = 11/248 (4%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 110 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 168
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 169 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 228
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E AL A++ L+GT+ MRG +QPL+V+ AD
Sbjct: 229 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALVAMNSLSGTYIMRGCEQPLIVQFAD 288
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ------- 311
PK+PR GE RG AFG P + +RP NL G + P+ S+RP
Sbjct: 289 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMAP 347
Query: 312 HIFNNSHP 319
H FNN P
Sbjct: 348 HQFNNFGP 355
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASASTIPT--VPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T T +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 581 PVQSNTPGAPAAMMTTKTNAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 638
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 639 EKPEEYILYEQQ-QHHQKL 656
>gi|32482106|gb|AAP84405.1| FCA protein [Triticum aestivum]
Length = 735
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 111 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 169
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 170 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 229
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 230 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 289
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
++PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 290 RRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 347
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 348 HQFNNFGS 355
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 580 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 637
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 638 EKPEEYILYEQQ-QQHQKL 655
>gi|32482100|gb|AAP84402.1| FCA protein [Triticum aestivum]
Length = 736
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 167/247 (67%), Gaps = 11/247 (4%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 111 HDNKSGY-VKLFVGSVPRTANEDDVRPLFENHGDVLEVALIRDRKTGEQQGCCFVKYATS 169
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 170 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 229
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 230 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 289
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ-------H 312
K+PR GE RG AFG P + +RP NL G + P+ S+RP H
Sbjct: 290 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMAPH 348
Query: 313 IFNNSHP 319
FNN P
Sbjct: 349 QFNNFGP 355
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 581 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 638
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 639 EKPEEYILYEQQ-QHHQKL 656
>gi|332658328|gb|AEE83728.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 672
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 164/241 (68%), Gaps = 10/241 (4%)
Query: 67 PFIGRKRGFNHPAPDH-------INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV 119
P G+KRG+ P DH ++D KL+V VPRTATEE+IRP FE+HGNV+EV
Sbjct: 17 PLSGQKRGY--PISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEV 74
Query: 120 VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAP 179
L KDKRTGQQQG CFVK+ ++A AIRAL+ PG ++VR+ADGERE
Sbjct: 75 ALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTL 134
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS 239
KL+VG L+KQ ++KE+EE+F +GH+ED++++RDE +QSRGC FV++S +E A+AAI
Sbjct: 135 EFKLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAID 194
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSA 298
GLNGT+TMRG +QPL+VR A+PK+P+ GE R GP F RP N G+S+
Sbjct: 195 GLNGTYTMRGCNQPLIVRFAEPKRPKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSS 254
Query: 299 G 299
G
Sbjct: 255 G 255
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 422 VPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQ 469
P Q S +C W+EHT PDG KYYYN T ES+W+KPEE ++FE+
Sbjct: 508 APAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVFER 555
>gi|32482069|gb|AAP84391.1| FCA protein [Triticum aestivum]
Length = 732
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG K +V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 108 HDNKSGY-VKFFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 166
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 167 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 226
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 227 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 286
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 287 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 344
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 345 HQFNNFGS 352
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 577 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 634
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 635 EKPEEYILYEQQ-QQHQKL 652
>gi|115478012|ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group]
gi|34555646|gb|AAQ74971.1| flowering time control protein isoform OsFCA-3 [Oryza sativa Indica
Group]
gi|113630834|dbj|BAF24515.1| Os09g0123200 [Oryza sativa Japonica Group]
Length = 637
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 132/255 (51%), Positives = 174/255 (68%), Gaps = 6/255 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N + KL++ VPRTATE+D+RPLFEEHG+V+EV L KD++TG+QQG CFVK+
Sbjct: 13 DHDNRNNY-VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYAT 71
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ Y PG I+VR+ADGERE A KL+V L+KQ + KEIEE+
Sbjct: 72 SEEAERAIRALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEI 131
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+PYGH+ED++I++D ++QSRGC FV+FS RE ALAA+S L+G + MRG +QPL++R AD
Sbjct: 132 FAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 191
Query: 261 PKKPRTGELRGNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P F P + +RP NL G + P+ S+ P S
Sbjct: 192 PKRPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPD-SWHPSS--PRSA 248
Query: 319 PQVFSNWGNQEAATP 333
P F+N+G+ P
Sbjct: 249 PHQFNNFGSDNPMAP 263
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 417 STIPTVPQSPQVAASP-ECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
S I T+PQ A P C+W+EHT P+G KYYYN T ES+WDKPEEY+L+E
Sbjct: 494 SNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYE 546
>gi|32482371|gb|AAP84378.1| FCA protein [Triticum aestivum]
Length = 736
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D+ TG+QQG CFVK+
Sbjct: 112 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRNTGEQQGCCFVKYATS 170
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 171 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 230
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 231 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 290
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 291 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 348
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 349 HQFNNFGS 356
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 581 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 638
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 639 EKPEEYILYEQQ-QQHQKL 656
>gi|32482104|gb|AAP84404.1| FCA protein [Triticum aestivum]
Length = 738
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 114 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 172
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ DGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 173 EEAERAIRALHNQCTIPGAMGPVQVRYTDGEKERHGSIEHKLFVASLNKQATAKEIEEIF 232
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 233 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 292
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 293 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 350
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 351 HQFNNFGS 358
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 583 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 640
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 641 EKPEEYILYEQQ-QQHQKL 658
>gi|34555650|gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica
Group]
Length = 626
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/255 (51%), Positives = 174/255 (68%), Gaps = 6/255 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N + KL++ VPRTATE+D+RPLFEEHG+V+EV L KD++TG+QQG CFVK+
Sbjct: 13 DHDNRNNY-VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYAT 71
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ Y PG I+VR+ADGERE A KL+V L+KQ + KEIEE+
Sbjct: 72 SEEAERAIRALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEI 131
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+PYGH+ED++I++D ++QSRGC FV+FS RE ALAA+S L+G + MRG +QPL++R AD
Sbjct: 132 FAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 191
Query: 261 PKKPRTGELRGNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P F P + +RP NL G + P+ S+ P S
Sbjct: 192 PKRPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPD-SWHPSS--PRSA 248
Query: 319 PQVFSNWGNQEAATP 333
P F+N+G+ P
Sbjct: 249 PHQFNNFGSDNPMAP 263
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 417 STIPTVPQSPQVAASP-ECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
S I T+PQ A P C+W+EHT P+G KYYYN T ES+WDKPEEY+L+E
Sbjct: 494 SNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYE 546
>gi|32482072|gb|AAP84392.1| FCA protein [Triticum aestivum]
Length = 736
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 170/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 112 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 170
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ DGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 171 EEAERAIRALHNQCTIPGAMGPVQVRYVDGEKERHGSIEHKLFVASLNKQATAKEIEEIF 230
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I+RD ++QSRGC V+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 231 APFGHVEDVYIMRDGMRQSRGCGLVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 290
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 291 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 348
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 349 HQFNNFGS 356
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 581 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 638
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 639 EKPEEYILYEQQ-QQHQKL 656
>gi|32482369|gb|AAP84377.1| FCA protein [Triticum aestivum]
Length = 727
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 107 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGRCFVKYATS 165
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGERE + KL+V L+KQ + KEIEE+F
Sbjct: 166 EEAERAIRALHNQCTIPGAMGPVQVRYADGERERHGSIEHKLFVASLNKQATAKEIEEIF 225
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 226 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 285
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +R NL G + P+ S+RP ++ P
Sbjct: 286 KRPRPGESRGGPAFGGPGVSSRSDAALVIRTTANLDEQIGRHMPPD-SWRPSSP-SSMAP 343
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 344 HQFNNFGS 351
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 576 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 633
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + Q+ +
Sbjct: 634 EKPEEYILYEQQRQHQKLI 652
>gi|32482373|gb|AAP84379.1| FCA protein [Triticum aestivum]
Length = 737
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 113 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 171
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA IRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 172 EEAERVIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 231
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 232 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 291
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 292 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 349
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 350 HQFNNFGS 357
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 582 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 639
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 640 EKPEEYILYEQQ-QQHQKL 657
>gi|218201679|gb|EEC84106.1| hypothetical protein OsI_30426 [Oryza sativa Indica Group]
Length = 758
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/255 (51%), Positives = 174/255 (68%), Gaps = 6/255 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N + KL++ VPRTATE+D+RPLFEEHG+V+EV L KD++TG+QQG CFVK+
Sbjct: 114 DHDNRNNY-VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYAT 172
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ Y PG I+VR+ADGERE A KL+V L+KQ + KEIEE+
Sbjct: 173 SEEAERAIRALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEI 232
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+PYGH+ED++I++D ++QSRGC FV+FS RE ALAA+S L+G + MRG +QPL++R AD
Sbjct: 233 FAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 292
Query: 261 PKKPRTGELRGNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P F P + +RP NL G + P+ S+ P S
Sbjct: 293 PKRPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPD-SWHPSS--PRSA 349
Query: 319 PQVFSNWGNQEAATP 333
P F+N+G+ P
Sbjct: 350 PHQFNNFGSDNPMAP 364
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 417 STIPTVPQSPQVAASP-ECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
S I T+PQ A P C+W+EHT P+G KYYYN T ES+WDKPEEY+L+E
Sbjct: 600 SNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYE 652
>gi|32482112|gb|AAP84408.1| FCA protein [Triticum aestivum]
Length = 741
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 167/248 (67%), Gaps = 11/248 (4%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 115 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 173
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+
Sbjct: 174 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEI 233
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QP +VR AD
Sbjct: 234 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPSIVRFAD 293
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ------- 311
PK+PR GE RG A G P + +RP NL G + P+ S+RP
Sbjct: 294 PKRPRPGESRGGPALGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMAP 352
Query: 312 HIFNNSHP 319
H FNN P
Sbjct: 353 HQFNNFGP 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 586 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 643
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 644 EKPEEYILYEQQ-QHHQKL 661
>gi|33390912|gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
Group]
gi|47496990|dbj|BAD20100.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza sativa Japonica Group]
gi|58003966|gb|AAW62371.1| FCA [Oryza sativa Japonica Group]
Length = 738
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 132/255 (51%), Positives = 174/255 (68%), Gaps = 6/255 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N + KL++ VPRTATE+D+RPLFEEHG+V+EV L KD++TG+QQG CFVK+
Sbjct: 114 DHDNRNNY-VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYAT 172
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ Y PG I+VR+ADGERE A KL+V L+KQ + KEIEE+
Sbjct: 173 SEEAERAIRALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEI 232
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+PYGH+ED++I++D ++QSRGC FV+FS RE ALAA+S L+G + MRG +QPL++R AD
Sbjct: 233 FAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 292
Query: 261 PKKPRTGELRGNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P F P + +RP NL G + P+ S+ P S
Sbjct: 293 PKRPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPD-SWHPSS--PRSA 349
Query: 319 PQVFSNWGNQEAATP 333
P F+N+G+ P
Sbjct: 350 PHQFNNFGSDNPMAP 364
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 417 STIPTVPQSPQVAASP-ECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
S I T+PQ A P C+W+EHT P+G KYYYN T ES+WDKPEEY+L+E
Sbjct: 595 SNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYE 647
>gi|32482388|gb|AAP84383.1| FCA protein [Triticum aestivum]
Length = 710
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 111 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEYHGDVLEVALIRDRKTGEQQGCCFVKYATS 169
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 170 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 229
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 230 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 289
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 290 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 347
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 348 HQFNNFGS 355
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + CDW+EHT P+G KYYYN T ES+W
Sbjct: 580 PVQSNTPGAPAAMMTTKINAIPQRVNSPAVSLT--CDWTEHTSPEGFKYYYNSITRESKW 637
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 638 EKPEEYILYEQQ-QQHQKL 655
>gi|32482394|gb|AAP84386.1| FCA protein [Triticum aestivum]
Length = 735
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 111 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 169
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L++Q + KEIEE+F
Sbjct: 170 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNRQATAKEIEEIF 229
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 230 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 289
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ +RP ++ P
Sbjct: 290 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-GWRPSSP-SSMAP 347
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 348 HQFNNFGS 355
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 580 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 637
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 638 EKPEEYILYEQQ-QQHQKL 655
>gi|297800520|ref|XP_002868144.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313980|gb|EFH44403.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 178/274 (64%), Gaps = 14/274 (5%)
Query: 67 PFIGRKRGFNHPAPDH-------INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV 119
P G+KRG+ P+ DH ++D KL+V VPRTA EE++RP FE+HGNV+EV
Sbjct: 99 PLSGQKRGY--PSSDHGSYTGADVSDHSSTVKLFVGSVPRTAIEEEVRPFFEKHGNVLEV 156
Query: 120 VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAP 179
L KDKRTGQQQG CFVK+ ++A AIRAL+ PG ++VR+ADGERE
Sbjct: 157 ALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTL 216
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS 239
KL+VG L+KQ ++KE+EE+F +G +ED++++RDE +QSRGC FV++S +E A+AAI
Sbjct: 217 EFKLFVGSLNKQATEKEVEEIFLQFGRVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAID 276
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNF-LEPVRPPPNLGNSA 298
GLNGT+TMRG +QPL+VR ADPK+P+ GE R A GP F + RP N G+S+
Sbjct: 277 GLNGTYTMRGCNQPLIVRFADPKRPKPGESRDMTAPVGLGSGPRFQVSGQRPTSNFGDSS 336
Query: 299 GGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAAT 332
G N +RP + N P SN G + A T
Sbjct: 337 GDVSHTN-PWRPANSQNVGPP---SNTGIRGAGT 366
>gi|222142946|gb|ACI16484.2| flowering time control protein [Hordeum vulgare]
Length = 743
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 117 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 175
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 176 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 235
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR A+P
Sbjct: 236 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFANP 295
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ ++RP ++ P
Sbjct: 296 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-TWRPSSP-SSMAP 353
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 354 HQFNNFGS 361
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 585 PVQSNAPGAPAAMMTTNINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 642
Query: 459 DKPEEYLLFE 468
+KPEEY+L+E
Sbjct: 643 EKPEEYVLYE 652
>gi|32482092|gb|AAP84399.1| FCA protein [Triticum aestivum]
Length = 740
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 117 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 175
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 176 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 235
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 236 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 295
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG + +RP NL G + P+ S+RP ++ P
Sbjct: 296 KRPRPGESRGGPAFGGLGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 353
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 354 HQFNNFGS 361
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 586 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 643
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 644 EKPEEYILYEQQ--QHQKL 660
>gi|32482127|gb|AAP84414.1| FCA protein [Triticum aestivum]
Length = 740
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 170/249 (68%), Gaps = 5/249 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N S KL V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 116 DHDNKSSY-VKLIVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 174
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EE +AIRAL+ PG ++VR+ DGE+E + KL+V L+KQ + KEIEE+
Sbjct: 175 SEETESAIRALHNQCTIPGAMGPVQVRYTDGEKERHGSIEHKLFVASLNKQATAKEIEEI 234
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 235 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFAD 294
Query: 261 PKKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P + +RP NL G + P+ S+RP ++
Sbjct: 295 PKRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMA 352
Query: 319 PQVFSNWGN 327
P F+N+G+
Sbjct: 353 PHQFNNFGS 361
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 404 PRSGNNPQTSASASTIPTVPQSPQV---AASPECDWSEHTCPDGNKYYYNCETCESRWDK 460
P N P SA+ T QV A S C+W+EHT P+G KYYYN T ES+W+K
Sbjct: 585 PVQSNTPGASAAMMTTKINAILQQVNSPAVSLTCNWTEHTSPEGFKYYYNSITRESKWEK 644
Query: 461 PEEYLLFEQQIEKQQKL 477
PEEY+L+EQQ ++ QKL
Sbjct: 645 PEEYILYEQQ-QQHQKL 660
>gi|34555648|gb|AAQ74972.1| flowering time control protein isoform OsFCA-2 [Oryza sativa Indica
Group]
Length = 649
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/255 (51%), Positives = 174/255 (68%), Gaps = 6/255 (2%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N + KL++ VPRTATE+D+RPLFEEHG+V+EV L KD++TG+QQG CFVK+
Sbjct: 114 DHDNRNNY-VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYAT 172
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ Y PG I+VR+ADGERE A KL+V L+KQ + KEIEE+
Sbjct: 173 SEEAERAIRALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEI 232
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F+PYGH+ED++I++D ++QSRGC FV+FS RE ALAA+S L+G + MRG +QPL++R AD
Sbjct: 233 FAPYGHVEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 292
Query: 261 PKKPRTGELRGNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
PK+PR GE RG AFG P F P + +RP NL G + P+ S+ P S
Sbjct: 293 PKRPRPGESRGGPAFGGPGFSPRSDAALVIRPTANLDEPRGRHMPPD-SWHPSS--PRSA 349
Query: 319 PQVFSNWGNQEAATP 333
P F+N+G+ P
Sbjct: 350 PHQFNNFGSDNPMAP 364
>gi|32482385|gb|AAP84382.1| FCA protein [Triticum aestivum]
Length = 700
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 170/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V PRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 98 HDNKSGY-VKLFVGSAPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 156
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 157 EEAERAIRALHNQCTIPGAMGPVQVRCADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 216
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 217 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 276
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 277 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 334
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 335 HQFNNFGS 342
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 568 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 625
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 626 EKPEEYILYEQQ-QHHQKL 643
>gi|32482076|gb|AAP84394.1| FCA protein [Triticum aestivum]
Length = 734
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 110 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 168
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 169 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 228
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E LAA++ L+GT+ MRG +QPL+VR AD
Sbjct: 229 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPPLAAMNSLSGTYIMRGCEQPLIVRFADL 288
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP +++ P
Sbjct: 289 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSTAP 346
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 347 HQFNNFGS 354
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 579 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 636
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 637 EKPEEYILYEQQ-QQHQKL 654
>gi|32482367|gb|AAP84376.1| FCA protein [Triticum aestivum]
Length = 735
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 171/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG FVK+
Sbjct: 111 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCRFVKYATS 169
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 170 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 229
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 230 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 289
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 290 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 347
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 348 HQFNNFGS 355
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 580 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 637
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 638 EKPEEYILYEQQ-QQHQKL 655
>gi|357511413|ref|XP_003625995.1| FCA-like protein [Medicago truncatula]
gi|355501010|gb|AES82213.1| FCA-like protein [Medicago truncatula]
Length = 569
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 261/518 (50%), Gaps = 113/518 (21%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
I RKR + P D ++ +G K+YVAPVPRTA+E D+R +F+ +G ++EVVL +DK TG
Sbjct: 55 IPRKRQWG-PPQDQVDVTG-HVKVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATG 112
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH-----------PV 177
+QG C VK++ F+EA AI+AL+ Y FPGE + + VRFAD +RE
Sbjct: 113 VRQGSCLVKYSTFDEADMAIKALSNQYTFPGESSPVVVRFADRKRERFGLRDFCQNMERR 172
Query: 178 APPD---KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVR-------------------- 214
PP+ K+YVGC++ + SK+EIEE+FSPYGHIED+ ++R
Sbjct: 173 DPPEVVGKVYVGCINNEASKQEIEEIFSPYGHIEDVVVLRNRGYGFVKFYNREMALAAIK 232
Query: 215 --DELKQSRGC---------------------AFVQFSHREMALAAISG----------- 240
D RGC F+ ++ ++ I+G
Sbjct: 233 GLDRTFTMRGCDQPLIVRFAEPKKPRMGELRFCFLTSFFIQLCISVIAGGSNQAALFTWL 292
Query: 241 -LNGTFTM---RGSDQPLVVRIADPKK--------PRTGELRGNYAFGTPSFGPNFLEPV 288
+N + T R + L+ + + + +L GNY S+GP+ EP
Sbjct: 293 SVNDSLTWYESRSGNIELIFCLTCVQALIGLSLAYEKICKLEGNYLPANASYGPSSQEPA 352
Query: 289 RPP------PNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQ 342
P PN G S I P+ S P N P NW Q AT + QQ
Sbjct: 353 AWPLPNFCDPNTGGS-NMHIAPHHSRLPHQQVNAHIP----NW--QPVATVVQQQF--PP 403
Query: 343 QQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESE 402
Q SQL+ + L+ +Q P +SQ ++++Q+Q H S QN+EQQ +S + ++
Sbjct: 404 QHVHSQLTSMPLRPLQAPNLSSQ---PFITEVQRQFHPPDSLVQNIEQQLSSQL---PTQ 457
Query: 403 SPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPE 462
+ R + ST P + +PQ PE DWSEH CPDGNKYYYNC TCESRW+KP
Sbjct: 458 TERC-----NTVVGSTSPDLHTNPQDEEFPESDWSEHYCPDGNKYYYNCVTCESRWEKPG 512
Query: 463 EYLLFEQQIEKQQKLQNGS-----QSVSSTKEVAQTQE 495
EY L++++ +KQ + + S S+SS++EV+Q Q+
Sbjct: 513 EYALYDKESQKQHEQDDHSLLQPQLSLSSSQEVSQKQQ 550
>gi|32482130|gb|AAP84415.1| FCA protein, partial [Triticum aestivum]
Length = 743
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 170/248 (68%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 119 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 177
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEI E+F
Sbjct: 178 EEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIGEIF 237
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRG FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADP
Sbjct: 238 APFGHVEDVYIMKDGMRQSRGSGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADP 297
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+PR GE RG AFG P + +RP NL G + P+ S+RP + + P
Sbjct: 298 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMA-P 355
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 356 HQFNNFGS 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Query: 408 NNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPE 462
N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W+KPE
Sbjct: 592 NTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWAEHTSPEGFKYYYNSITRESKWEKPE 649
Query: 463 EYLLFEQQIEKQQKL 477
EY+L+EQQ ++ QKL
Sbjct: 650 EYILYEQQ-QQHQKL 663
>gi|32482118|gb|AAP84411.1| FCA protein, partial [Triticum aestivum]
Length = 736
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/244 (49%), Positives = 164/244 (67%), Gaps = 11/244 (4%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L + ++TG+QQG CFVK+
Sbjct: 113 HDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRGRKTGEQQGCCFVKYATS 171
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIRA + PG ++VR+ADGE+E + KL+V L+KQ + KEIEE+F
Sbjct: 172 EEAERAIRAQHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIF 231
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+G + MRG +QPL+VR ADP
Sbjct: 232 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGAYIMRGCEQPLIVRFADP 291
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ-------H 312
K+PR GE RG AFG P + +RP NL G + P+ S+RP H
Sbjct: 292 KRPRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMAPH 350
Query: 313 IFNN 316
FNN
Sbjct: 351 QFNN 354
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 582 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 639
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 640 EKPEEYILYEQQ--QHQKL 656
>gi|32482392|gb|AAP84385.1| FCA protein [Triticum aestivum]
Length = 738
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 168/248 (67%), Gaps = 5/248 (2%)
Query: 82 HINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
H N SG KL+V VPRTA E+D RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 115 HDNKSGY-VKLFVGSVPRTANEDDARPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATS 173
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
EEA AIR L+ PG ++VR+ADGE+E + KL+V L++Q + KEIEE+F
Sbjct: 174 EEAERAIRTLHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNRQATAKEIEEIF 233
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ M G +QPL+VR ADP
Sbjct: 234 APFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMGGCEQPLIVRFADP 293
Query: 262 KKPRTGELRGNYAFGTPSFG--PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
K+ R GE RG AFG P + +RP NL G + P+ S+RP ++ P
Sbjct: 294 KRLRPGESRGGPAFGGPGVSSRSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAP 351
Query: 320 QVFSNWGN 327
F+N+G+
Sbjct: 352 HQFNNFGS 359
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 9/79 (11%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+
Sbjct: 584 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKR 641
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEE +L+EQQ ++QKL
Sbjct: 642 EKPEECILYEQQ--QRQKL 658
>gi|18150431|gb|AAL61622.1|AF414188_1 FCA gamma [Brassica napus]
Length = 715
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 148/211 (70%), Gaps = 9/211 (4%)
Query: 67 PFIGRKRGFNHPAPDH-------INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV 119
P G+KRG P + + D KL+V VPRTATEE++RP FE+HGNV+EV
Sbjct: 74 PLSGQKRG--RPLSEQSSFTGTDLTDRSSMVKLFVGSVPRTATEEEVRPFFEQHGNVLEV 131
Query: 120 VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAP 179
KDKRTGQQQG CFVK+ E+A AIRAL+ PG ++VR+ADGERE A
Sbjct: 132 AFIKDKRTGQQQGCCFVKYATSEDADRAIRALHNQITLPGGTGLVQVRYADGERERIGAV 191
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS 239
KL+VG L+KQ ++ E+EE+F +G +ED++++RDE +QSRGC FV++S +E A+AAI
Sbjct: 192 EFKLFVGSLNKQATENEVEELFLQFGRVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAID 251
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
GLNGT+TMRG +QPL+VR ADPK+P+ GE R
Sbjct: 252 GLNGTYTMRGCNQPLIVRFADPKRPKPGESR 282
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 22/136 (16%)
Query: 347 SQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSH----------- 395
S+L QL QQ Q + Q SQQA S +Q+Q+ Q Q + Q H
Sbjct: 482 SELVQLLSQQTQTLQATFQSSQQAFSQLQEQVQSMQQPNQKLPGSQTGHGKQQWAGSAIP 541
Query: 396 -VIVSESESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETC 454
V+ + + +P S QT+A A+T Q S +C+W+EHT PDG KYYYN +T
Sbjct: 542 TVVSTTASTPVSYM--QTAAPAAT--------QSVVSRKCNWTEHTSPDGFKYYYNGQTG 591
Query: 455 ESRWDKPEEYLLFEQQ 470
ES+W+KPEE +LFE+Q
Sbjct: 592 ESKWEKPEEMVLFERQ 607
>gi|2275209|gb|AAB63831.1| putative FCA-related protein [Arabidopsis thaliana]
Length = 324
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 141/197 (71%), Gaps = 10/197 (5%)
Query: 84 NDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEE 143
N G AKLYVAP+ +TATE DIR +FE++GNV E++LPKDK TG++ YCF+K+ EE
Sbjct: 104 NADGSIAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEE 163
Query: 144 AGNAIRALNGHYIFPGEQASIKVRFADGEREH--------PVAPPD--KLYVGCLSKQTS 193
AI AL + FPGE +KVRFA+ ERE PV PD KLYV CL+KQT+
Sbjct: 164 GNAAIAALTEQFTFPGEMLPVKVRFAEAERERIGKCRCFAPVQLPDNPKLYVRCLNKQTT 223
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
K E+ EVFS YG IEDI++ D++K RG AFVQFS +EMALAAI LNG FT+RGSDQP
Sbjct: 224 KMEVNEVFSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQP 283
Query: 254 LVVRIADPKKPRTGELR 270
L+VR ADPKKPR GE R
Sbjct: 284 LIVRFADPKKPRLGEQR 300
>gi|50261759|gb|AAT72460.1| FCA gamma protein [Lolium perenne]
Length = 668
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 163/245 (66%), Gaps = 11/245 (4%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N G KL+V VPR A+E+D+R L EEHG+V+EV L +DK+TG+QQ CFVK+
Sbjct: 44 DHDNKIGY-VKLFVGTVPRIASEDDVRHLSEEHGDVLEVALIRDKKTGEQQECCFVKYAT 102
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
E A AIRAL+ Y PG ++VR+AD E+E + KL+V L+KQ + KEIEE+
Sbjct: 103 SEGAKRAIRALHNQYTIPGAMGPVEVRYADCEKERLGSIEHKLFVASLNKQATAKEIEEI 162
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
FSP+GH+ED++I++D +QSRGC FV+FS +E AL+A++ L+GT+ MRG +QPL+VR AD
Sbjct: 163 FSPFGHVEDVYIMKDGTRQSRGCGFVEFSSKEPALSAVNSLSGTYIMRGCEQPLIVRFAD 222
Query: 261 PKKPRTGELRGNYAFGTPSFGP--NFLEPVRPPPNLGNSAGGQILPNVSYRP-------Q 311
PK+PR GE RG AFG P + +RP NL + G+ +P ++RP
Sbjct: 223 PKRPRPGESRGGPAFGGSGVSPRSDAALVIRPTANL-DEPRGRHMPRDAWRPSSPSSVAS 281
Query: 312 HIFNN 316
H FNN
Sbjct: 282 HQFNN 286
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 417 STIPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
S I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W+KPEEY+L+E
Sbjct: 525 SNINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKWEKPEEYVLYE 577
>gi|11045077|emb|CAB41488.2| putative FCA orthologue [Brassica napus]
Length = 384
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 138/181 (76%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VPRTATEE++RP FE+HGNV+EV KDKRTGQQQG CFVK+ E+A AIR
Sbjct: 105 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 164
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
AL+ PG ++VR+ADGERE A KL+VG L+KQ ++ E+EE+F +G +ED
Sbjct: 165 ALHNQITLPGGTGLVQVRYADGERERIGAVEFKLFVGSLNKQATENEVEELFLQFGRVED 224
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGEL 269
++++RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR ADPK+P+ GE
Sbjct: 225 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPKPGES 284
Query: 270 R 270
R
Sbjct: 285 R 285
>gi|168041276|ref|XP_001773118.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675665|gb|EDQ62158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 139/186 (74%), Gaps = 2/186 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VPRT TE+++RP+F EHGNV+EV + KDKRTG QQG CFVK++ EEA AIR
Sbjct: 16 VKLFVGSVPRTITEDEVRPMFAEHGNVLEVAIIKDKRTGNQQGCCFVKYSTVEEAERAIR 75
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
AL+ PG + ++VR+ADGERE A KL+VG L+KQ S+KEIEE+F PYG ++D
Sbjct: 76 ALHNQKTLPGGVSPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFIPYGRVDD 135
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGEL 269
++I+RDE KQSRGCAF+++S R+ A AAI+ LNG M+G DQPL VR ADPK+P+ G+
Sbjct: 136 VYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQGCDQPLAVRFADPKRPKGGDA 195
Query: 270 RGNYAF 275
R Y F
Sbjct: 196 R--YVF 199
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISG 240
KL+VG + + ++ E+ +F+ +G++ ++ I++D+ +GC FV++S E A AI
Sbjct: 17 KLFVGSVPRTITEDEVRPMFAEHGNVLEVAIIKDKRTGNQQGCCFVKYSTVEEAERAIRA 76
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGT 277
L+ T+ G P+ VR AD ++ R G + G+
Sbjct: 77 LHNQKTLPGGVSPVQVRYADGERERLGAVEHKLFVGS 113
>gi|32482055|gb|AAP84374.1| FCA-A1 [Triticum aestivum]
Length = 602
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 156/224 (69%), Gaps = 4/224 (1%)
Query: 106 IRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIK 165
+RPLFE+HG+V+EV L +D++TG+QQG CFVK+ EEA AIRAL+ PG ++
Sbjct: 1 VRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRALHNQCTIPGAMGPVQ 60
Query: 166 VRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAF 225
VR+ADGE+E + KL+V L+KQ + KEIEE+F+P+GH+ED++I++D ++QSRGC F
Sbjct: 61 VRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVEDVYIMKDGMRQSRGCGF 120
Query: 226 VQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFG--PN 283
V+FS +E ALAA++ L+GT+ MRG +QPL+VR ADPK+PR GE RG AFG P +
Sbjct: 121 VKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPRPGESRGGPAFGGPGVSSRSD 180
Query: 284 FLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGN 327
+RP NL G + P+ S+RP ++ P F+N+G+
Sbjct: 181 AALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAPHQFNNFGS 222
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 447 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 504
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 505 EKPEEYILYEQQ-QQHQKL 522
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
I KL+VA + + AT ++I +F G+V +V + KD Q +G FVKF+ E A A
Sbjct: 74 IEHKLFVASLNKQATAKEIEEIFAPFGHVEDVYIMKDGMR-QSRGCGFVKFSSKEPALAA 132
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHP 176
+ +L+G YI G + + VRFAD +R P
Sbjct: 133 MNSLSGTYIMRGCEQPLIVRFADPKRPRP 161
>gi|302818861|ref|XP_002991103.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
gi|300141197|gb|EFJ07911.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
Length = 509
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY---CFVKFTIFEEAGN 146
KL+V VPRT TE+ +R +FEE+G V+EV + KD+RTG QQG CFVK++ +EA
Sbjct: 42 VKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTGHQQGMFCCCFVKYSSRDEADR 101
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGH 206
AIR LN PG + ++VR+ADGERE A KL+VGCL+K S++EIEEVFSPYG
Sbjct: 102 AIRCLNNQRTLPGGASPVQVRYADGERERLGAIEHKLFVGCLNKHASEREIEEVFSPYGR 161
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++DI+++RDE KQSRGCAF+++ R+MA AAI+ LN + MRG DQPL VR ADPK+P+T
Sbjct: 162 VDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDVYIMRGCDQPLAVRFADPKRPKT 221
Query: 267 GELRGNYA 274
G+ R +++
Sbjct: 222 GDSRNSFS 229
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 417 STIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQI 471
S +PT P V A +W+EH PDG KYYYN T ES+W++P+E EQQ+
Sbjct: 426 SLLPTPALPPAVVAPATSNWTEHVSPDGYKYYYNSITSESKWERPDE---LEQQV 477
>gi|359479959|ref|XP_002271329.2| PREDICTED: flowering time control protein FCA-like [Vitis vinifera]
Length = 402
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 154/238 (64%), Gaps = 26/238 (10%)
Query: 181 DKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISG 240
DKLYVG L+KQ SK+EIEE+FSPYG +EDIFIVRD++KQSRGC FV+ S+R+MA+AAI+
Sbjct: 160 DKLYVGYLNKQASKREIEEIFSPYGIVEDIFIVRDDMKQSRGCGFVKLSNRDMAVAAINA 219
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPV-RPPPNLGNSAG 299
LNG + MRG DQPL+VR ADPKKPR GE RG+ AFG P FGP EP+ P PN+G+
Sbjct: 220 LNGNYVMRGCDQPLIVRFADPKKPRIGESRGHVAFGGPKFGPRSQEPLGWPAPNVGDPMW 279
Query: 300 GQILPNVSY--------------------RPQHIFNNSHPQVFSNWGNQEAATP-IIQQL 338
Q LPN Y Q I +S PQV S NQ+ P +QQ
Sbjct: 280 RQFLPNPLYPASPNSTASSCQVMQSNSSASVQPIPAHSQPQVVSQTANQQPNVPSAVQQP 339
Query: 339 HCSQQQSSSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHV 396
+ QQS SQ LQQ ++ SQ ++AVS++QKQLHL TQN+EQQQNSHV
Sbjct: 340 LHTWQQSPSQ----ELQQAHTLQKGSQSLKEAVSEIQKQLHLAPPPTQNLEQQQNSHV 393
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 64/86 (74%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KLYV VPRT TEEDIR LFEEHG ++EVVL KDKRTGQQQ CFVK+ +EA AI+
Sbjct: 13 VKLYVGCVPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQECCFVKYATMDEADRAIK 72
Query: 150 ALNGHYIFPGEQASIKVRFADGEREH 175
ALN PG A+IKVR+ADGERE
Sbjct: 73 ALNNQRTLPGGVAAIKVRYADGERER 98
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISG 240
KLYVGC+ + ++++I +F +G I ++ +++D+ Q + C FV+++ + A AI
Sbjct: 14 KLYVGCVPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQECCFVKYATMDEADRAIKA 73
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTG 267
LN T+ G + VR AD ++ R
Sbjct: 74 LNNQRTLPGGVAAIKVRYADGERERLA 100
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KLYV + + A++ +I +F +G V ++ + +D Q +G FVK + + A AI A
Sbjct: 161 KLYVGYLNKQASKREIEEIFSPYGIVEDIFIVRDD-MKQSRGCGFVKLSNRDMAVAAINA 219
Query: 151 LNGHYIFPGEQASIKVRFAD 170
LNG+Y+ G + VRFAD
Sbjct: 220 LNGNYVMRGCDQPLIVRFAD 239
>gi|32482057|gb|AAP84375.1| mutant FCA-D1 [Triticum aestivum]
Length = 284
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 128/169 (75%), Gaps = 1/169 (0%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N SG KL+V VPRTA E+D+RPLFE+HG+V+EV L +D++TG+QQG CFVK+
Sbjct: 117 DHDNKSGY-VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYAT 175
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EEA AIRAL+ PG ++VR+ADGE+E + KL+V L+KQ + KEIEEV
Sbjct: 176 SEEAERAIRALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEV 235
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
F+P+GH+ED++I++D ++QSRGC FV+FS +E ALAA++ L+GT+ MRG
Sbjct: 236 FAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRG 284
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISG 240
KL+VG + + ++ ++ +F +G + ++ ++RD + + +GC FV+++ E A AI
Sbjct: 126 KLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRA 185
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTGEL 269
L+ T+ G+ P+ VR AD +K R G +
Sbjct: 186 LHNQCTIPGAMGPVQVRYADGEKERHGSI 214
>gi|168017537|ref|XP_001761304.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687644|gb|EDQ74026.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 194 bits (493), Expect = 1e-46, Method: Composition-based stats.
Identities = 93/158 (58%), Positives = 120/158 (75%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VPRT TE+++RP+F EHGNVIEV + KDKRTG QQG CFVK++ EEA AIRA
Sbjct: 3 KLFVGSVPRTITEDEVRPMFAEHGNVIEVAIIKDKRTGNQQGCCFVKYSTVEEADRAIRA 62
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG A ++VR+ADGERE A KL+VG L+KQ S+KEIEE+F PYG ++D+
Sbjct: 63 LHNQKTLPGGVAPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFLPYGRVDDV 122
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
+I+RDE KQSRGCAF+++S R+ A AAI+ LNG M+
Sbjct: 123 YIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQ 160
Score = 53.5 bits (127), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISG 240
KL+VG + + ++ E+ +F+ +G++ ++ I++D+ +GC FV++S E A AI
Sbjct: 3 KLFVGSVPRTITEDEVRPMFAEHGNVIEVAIIKDKRTGNQQGCCFVKYSTVEEADRAIRA 62
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGT 277
L+ T+ G P+ VR AD ++ R G + G+
Sbjct: 63 LHNQKTLPGGVAPVQVRYADGERERLGAVEHKLFVGS 99
>gi|50725240|dbj|BAD34210.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
Length = 546
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 115/172 (66%), Gaps = 5/172 (2%)
Query: 164 IKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGC 223
I+VR+ADGERE A KL+V L+KQ + KEIEE+F+PYGH+ED++I++D ++QSRGC
Sbjct: 4 IQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGC 63
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGP- 282
FV+FS RE ALAA+S L+G + MRG +QPL++R ADPK+PR GE RG AFG P F P
Sbjct: 64 GFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPRPGESRGGPAFGGPGFSPR 123
Query: 283 -NFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATP 333
+ +RP NL G + P+ S+ P S P F+N+G+ P
Sbjct: 124 SDAALVIRPTANLDEPRGRHMPPD-SWHPSS--PRSAPHQFNNFGSDNPMAP 172
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 417 STIPTVPQSPQVAASP-ECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFE 468
S I T+PQ A P C+W+EHT P+G KYYYN T ES+WDKPEEY+L+E
Sbjct: 403 SNINTIPQQATSPAVPLTCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYE 455
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+VA + + AT ++I +F +G+V +V + KD Q +G FVKF+ E A A+ A
Sbjct: 22 KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMR-QSRGCGFVKFSSREPALAAMSA 80
Query: 151 LNGHYIFPGEQASIKVRFADGEREHP 176
L+G+Y+ G + + +RFAD +R P
Sbjct: 81 LSGNYVMRGCEQPLIIRFADPKRPRP 106
>gi|124513886|ref|XP_001350299.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23615716|emb|CAD52708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 509
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 135/248 (54%), Gaps = 22/248 (8%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+P KL++ VP+ E+ +RP+FEE+G V EVV+ +DK T + FVK EA NA
Sbjct: 83 VPIKLFIGRVPKNIEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNA 142
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCLSKQTSKKEIEE 199
IR LN + S++V++A GE P + KL++G L K ++ I+E
Sbjct: 143 IRLLNNQKTLDAQLGSLQVKYASGELNKLGFPQNIESGVDQAKLFIGSLPKNITEDNIKE 202
Query: 200 VFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
+FSPYG +E++FI++D +GC+FV+FS++E AL AI LNG T+ G +P+ VR
Sbjct: 203 MFSPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQALYAIKSLNGKKTLEGCTRPVEVRF 262
Query: 259 ADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQILP-NVSYRPQHIFNNS 317
A+PK + ++ P L+P++ PP+ P N+++ NN+
Sbjct: 263 AEPKSSKQPQI------------PLTLQPMQNPPHAMAPQPSISSPNNINFGNNFSVNNN 310
Query: 318 HPQVFSNW 325
+P+ W
Sbjct: 311 YPRQVGPW 318
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 46/308 (14%)
Query: 171 GEREHPVAP----PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAF 225
G + P P P KL++G + K + ++ +F YG + ++ I+RD++ + AF
Sbjct: 71 GNHDFPCNPAPPVPIKLFIGRVPKNIEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAF 130
Query: 226 VQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFL 285
V+ + A AI LN T+ + G L+ YA G L
Sbjct: 131 VKMASISEADNAIRLLNNQKTLDA---------------QLGSLQVKYASGE-------L 168
Query: 286 EPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQS 345
+ P N+ S Q + P++I ++ ++FS +G E I + + +
Sbjct: 169 NKLGFPQNI-ESGVDQAKLFIGSLPKNITEDNIKEMFSPYGTVEEV--FIMKDNSTGLGK 225
Query: 346 SSQLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLR----QSSTQ-----NVEQQQNSHV 396
+ S ++ + S ++ + + + +R +SS Q ++ QN
Sbjct: 226 GCSFVKFSYKEQALYAIKSLNGKKTLEGCTRPVEVRFAEPKSSKQPQIPLTLQPMQNPPH 285
Query: 397 IVSESESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCES 456
++ S S NN + S P+ QV W E+ +G YYYN +T +
Sbjct: 286 AMAPQPSISSPNNINFGNNFSVNNNYPR--QVGP-----WKEYYSGEGRPYYYNEQTNTT 338
Query: 457 RWDKPEEY 464
+W+ P+E+
Sbjct: 339 QWEMPKEF 346
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 86 SGIP-AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEA 144
SG P A L++ VP + D+ F G ++ + +K TG+ +G+ FV + E A
Sbjct: 364 SGPPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGFAFVSYDSLESA 423
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGERE 174
AI +NG F +KV GE +
Sbjct: 424 AAAISQMNG---FMALNKKLKVTVKKGEED 450
>gi|221057576|ref|XP_002261296.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247301|emb|CAQ40701.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 512
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 15/202 (7%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HPAP + KL++ VP+ EE +RP+FEE G V EVV+ +DK T + FV
Sbjct: 80 HPAPP------VSIKLFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFV 133
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCL 188
K EA NAIR+LN + S++V++A GE P + KL++G L
Sbjct: 134 KMASISEADNAIRSLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSL 193
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
K S++ ++E+FSPYG +E++FI++D +GC+FV+F+++E AL AI+ LNG T+
Sbjct: 194 PKSISEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTL 253
Query: 248 RGSDQPLVVRIADPKKPRTGEL 269
G +P+ VR A+PK + ++
Sbjct: 254 EGCARPVEVRFAEPKSAKQAQI 275
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 129/304 (42%), Gaps = 49/304 (16%)
Query: 175 HPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHRE 232
HP P KL++G + K ++++ +F +G ++++ I+RD++ + AFV+ +
Sbjct: 80 HPAPPVSIKLFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASIS 139
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPP 292
A AI LN T+ P+ G L+ YA G + + P
Sbjct: 140 EADNAIRSLNNQRTL---------------DPQLGSLQVKYASGE-------IMKLGFPQ 177
Query: 293 NLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQL 352
N+ S Q + P+ I S ++FS +G+ E I + + + +
Sbjct: 178 NI-ESGVDQAKLFIGSLPKSISEESVKEMFSPYGSVEEV--FIMKDNSTGLGKGCSFVKF 234
Query: 353 SLQQIQIPRQNSQLSQQAVSDMQKQLHLR----QSSTQ-----NVEQQQNS-HVIVSE-- 400
+ ++ + NS ++ + + + +R +S+ Q N++ QNS H I S+
Sbjct: 235 AYKEQALYAINSLNGKKTLEGCARPVEVRFAEPKSAKQAQIPMNMQSMQNSAHGISSQPH 294
Query: 401 SESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDK 460
SP + N + P QV A W E+ +G YYYN +T ++W+
Sbjct: 295 VTSPNNINFGNNFGVNNNYPR-----QVGA-----WKEYYSGEGRPYYYNEQTNTTQWEM 344
Query: 461 PEEY 464
P+E+
Sbjct: 345 PKEF 348
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 40 YHSHHRRHYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIP-AKLYVAPVP 98
Y+S R Y Y++ ++ T + P F G H + + SG P A L++ VP
Sbjct: 323 YYSGEGRPYYYNEQTNT-TQW--EMPKEFETLFMGTTHNMHNLSDSSGPPGANLFIFHVP 379
Query: 99 RTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNG 153
+ D+ F G ++ + +K TG+ +G+ FV + E A AI +NG
Sbjct: 380 NEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESAAAAISQMNG 434
>gi|156101369|ref|XP_001616378.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148805252|gb|EDL46651.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 513
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 137/248 (55%), Gaps = 22/248 (8%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL++ VP+T EE +RP+FEE G V EVV+ +DK T + FVK EA NA
Sbjct: 86 VSIKLFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNA 145
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCLSKQTSKKEIEE 199
IR+LN + S++V++A GE P + KL++G L K +++ ++E
Sbjct: 146 IRSLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSITEESVKE 205
Query: 200 VFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
+FSPYG +E++FI++D +GC+FV+F+++E AL AI+ LNG T+ G +P+ VR
Sbjct: 206 MFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRF 265
Query: 259 ADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQILP-NVSYRPQHIFNNS 317
A+PK + ++ P L+P++ + NS P N+++ NN+
Sbjct: 266 AEPKSAKQTQI------------PMTLQPMQNAAHGMNSQPHVTSPNNINFGQNFGVNNN 313
Query: 318 HPQVFSNW 325
+P+ W
Sbjct: 314 YPRQVGAW 321
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 52 QMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFE 111
Q+ S + +G+ M K GF P +I AKL++ +P++ TEE ++ +F
Sbjct: 158 QLGSLQVKYASGEIM-----KLGF----PQNIESGVDQAKLFIGSLPKSITEESVKEMFS 208
Query: 112 EHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G+V EV + KD TG +G FVKF E+A AI +LNG G ++VRFA+
Sbjct: 209 PYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 267
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 40 YHSHHRRHYQYDQMSSE-----PTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIP--AKL 92
Y+S R Y Y++ ++ P +F F+G P +++DS P A L
Sbjct: 324 YYSGEGRPYYYNEQTNTTQWEMPKEF----ETLFMGST-----PNMHNLSDSSGPPGANL 374
Query: 93 YVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALN 152
++ VP + D+ F G ++ + +K TG+ +G+ FV + E A AI +N
Sbjct: 375 FIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAAAISQMN 434
Query: 153 G 153
G
Sbjct: 435 G 435
>gi|389584459|dbj|GAB67191.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 567
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 120/202 (59%), Gaps = 15/202 (7%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HPAP + KL++ VP++ EE +RP+FEE G V EVV+ +DK T + FV
Sbjct: 81 HPAPP------VSIKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFV 134
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCL 188
K EA NAIR+LN + S++V++A GE P + KL++G L
Sbjct: 135 KMASISEADNAIRSLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSL 194
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
K +++ ++E+FSPYG +E++FI++D +GC+FV+F+++E AL AI+ LNG T+
Sbjct: 195 PKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTL 254
Query: 248 RGSDQPLVVRIADPKKPRTGEL 269
G +P+ VR A+PK + ++
Sbjct: 255 EGCARPVEVRFAEPKSAKQTQI 276
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 126/304 (41%), Gaps = 49/304 (16%)
Query: 175 HPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHRE 232
HP P KL++G + K ++++ +F +G ++++ I+RD++ + AFV+ +
Sbjct: 81 HPAPPVSIKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASIS 140
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPP 292
A AI LN T+ P+ G L+ YA G + + P
Sbjct: 141 EADNAIRSLNNQRTL---------------DPQLGSLQVKYASGE-------IMKLGFPQ 178
Query: 293 NLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQL 352
N+ S Q + P+ I S ++FS +G+ E I + + + +
Sbjct: 179 NI-ESGVDQAKLFIGSLPKSITEESVKEMFSPYGSVEEV--FIMKDNSTGLGKGCSFVKF 235
Query: 353 SLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQ----------QQNSHVIVSE-- 400
+ ++ + NS ++ + + + +R + ++ +Q Q +H I S+
Sbjct: 236 AYKEQALYAINSLNGKKTLEGCARPVEVRFAEPKSAKQTQIPMTLQPMQNAAHGISSQPH 295
Query: 401 SESPRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDK 460
SP + N + P QV A W E+ +G YYYN +T ++W+
Sbjct: 296 VTSPNNINFGNNFGVNNNYPR-----QVGA-----WKEYYSGEGRPYYYNEQTNTTQWEM 345
Query: 461 PEEY 464
P+E+
Sbjct: 346 PKEF 349
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ VP + D+ F G ++ + +K TG+ +G+ FV + E A AI
Sbjct: 426 ANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAAAIS 485
Query: 150 ALNG 153
+NG
Sbjct: 486 QMNG 489
>gi|64213752|gb|AAY41232.1| RLS [synthetic construct]
Length = 175
Score = 145 bits (366), Expect = 6e-32, Method: Composition-based stats.
Identities = 67/116 (57%), Positives = 89/116 (76%)
Query: 155 YIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVR 214
Y PG I+VR+ADGERE A KL+V L+KQ + KEIEE+F+PYGH+ED++I++
Sbjct: 17 YTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMK 76
Query: 215 DELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
D ++QSRGC FV+FS RE ALAA+S L+G + MRG +QPL++R ADPK+PR GE R
Sbjct: 77 DGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPRPGESR 132
Score = 55.1 bits (131), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 87 GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
I KL+VA + + AT ++I +F +G+V +V + KD Q +G FVKF+ E A
Sbjct: 40 AIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMR-QSRGCGFVKFSSREPALA 98
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHP 176
A+ AL+G+Y+ G + + +RFAD +R P
Sbjct: 99 AMSALSGNYVMRGCEQPLIIRFADPKRPRP 128
>gi|82541152|ref|XP_724838.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479626|gb|EAA16403.1| FCA gamma-related [Plasmodium yoelii yoelii]
Length = 387
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 15/198 (7%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HPAP + KL++ VP+ EE +RP+FEE G V EVV+ +DK T + FV
Sbjct: 79 HPAPP------VSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFV 132
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCL 188
K EA NAIR+LN + S++V++A GE P + KL++G L
Sbjct: 133 KMASISEADNAIRSLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSL 192
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
K +++ I+++FS YG +E++FI++D +GC+FV+F+++E AL AIS LNG T+
Sbjct: 193 PKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTL 252
Query: 248 RGSDQPLVVRIADPKKPR 265
G ++P+ VR A+PK +
Sbjct: 253 EGCNRPVEVRFAEPKSSK 270
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 43/301 (14%)
Query: 175 HPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHRE 232
HP P KL++G + K ++++ +F +G + ++ I+RD++ + AFV+ +
Sbjct: 79 HPAPPVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASIS 138
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPP 292
A AI LN T+ DQ L G L+ YA G + + P
Sbjct: 139 EADNAIRSLNNQRTL---DQQL------------GSLQVKYASGE-------VMKLGFPQ 176
Query: 293 NLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQL 352
N+ S Q + P++I S +FS +G+ E I + + + +
Sbjct: 177 NV-ESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEV--FIMKDNSTGLGKGCSFVKF 233
Query: 353 SLQQIQIPRQNSQLSQQAVSDMQKQLHLR----QSSTQ-----NVEQQQNSHVIVSESES 403
+ ++ + +S ++ + + + +R +SS Q ++ QN+ +S
Sbjct: 234 AYKEQALYAISSLNGKKTLEGCNRPVEVRFAEPKSSKQAQSQVGIQPLQNAPHGISPQAH 293
Query: 404 PRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEE 463
P + NN + P+ V W E+ +G YYYN +T ++W+ P+E
Sbjct: 294 PGTPNNINYGNNFGVNNNYPRQVGV-------WKEYYSGEGRPYYYNEQTNTTQWEMPKE 346
Query: 464 Y 464
+
Sbjct: 347 F 347
>gi|83315537|ref|XP_730836.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23490683|gb|EAA22401.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana, putative
[Plasmodium yoelii yoelii]
Length = 440
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 15/198 (7%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HPAP + KL++ VP+ EE +RP+FEE G V EVV+ +DK T + FV
Sbjct: 8 HPAPP------VSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFV 61
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCL 188
K EA NAIR+LN + S++V++A GE P + KL++G L
Sbjct: 62 KMASISEADNAIRSLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSL 121
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
K +++ I+++FS YG +E++FI++D +GC+FV+F+++E AL AIS LNG T+
Sbjct: 122 PKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTL 181
Query: 248 RGSDQPLVVRIADPKKPR 265
G ++P+ VR A+PK +
Sbjct: 182 EGCNRPVEVRFAEPKSSK 199
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 124/301 (41%), Gaps = 43/301 (14%)
Query: 175 HPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHRE 232
HP P KL++G + K ++++ +F +G + ++ I+RD++ + AFV+ +
Sbjct: 8 HPAPPVSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASIS 67
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPP 292
A AI LN T+ DQ L G L+ YA G + + P
Sbjct: 68 EADNAIRSLNNQRTL---DQQL------------GSLQVKYASGE-------VMKLGFPQ 105
Query: 293 NLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQL 352
N+ S Q + P++I S +FS +G+ E I + + + +
Sbjct: 106 NV-ESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEV--FIMKDNSTGLGKGCSFVKF 162
Query: 353 SLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHVI---------VSESES 403
+ ++ + +S ++ + + + +R + ++ +Q Q+ I +S
Sbjct: 163 AYKEQALYAISSLNGKKTLEGCNRPVEVRFAEPKSSKQAQSQVGIQPLQNAPHGISPQAH 222
Query: 404 PRSGNNPQTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEE 463
P + NN + P+ V W E+ +G YYYN +T ++W+ P+E
Sbjct: 223 PGTPNNINYGNNFGVNNNYPRQVGV-------WKEYYSGEGRPYYYNEQTNTTQWEMPKE 275
Query: 464 Y 464
+
Sbjct: 276 F 276
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 76 NHPAPDHINDSGIP--AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
N+P +++DS P A L++ VP + D+ F G ++ + +K TG+ +G+
Sbjct: 283 NNPNIHNLSDSSGPPGANLFIFHVPNEWQQTDLIQAFSPFGELLSARIATEKNTGRNRGF 342
Query: 134 CFVKFTIFEEAGNAIRALNG 153
FV + E A AI +NG
Sbjct: 343 AFVSYENIESAAAAISQMNG 362
>gi|443691317|gb|ELT93212.1| hypothetical protein CAPTEDRAFT_183838 [Capitella teleta]
Length = 462
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 110/175 (62%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+RP+FEE G + E+ + KD+ TG +G F+ + + A A +A
Sbjct: 18 KLFVGQIPRNLEEKDLRPIFEEFGQIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQQA 77
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E A KL+VG L+KQ S++E+ ++FSPYG IE+
Sbjct: 78 LHEQKTLPGMNRPIQVKPADSESR---AEDRKLFVGMLNKQQSEEEVRQMFSPYGSIEEC 134
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+RD+ S+GCAFV+F+ A AAI+ L+G+ TM G+ LVV+ AD +K R
Sbjct: 135 TILRDQNGNSKGCAFVKFTTHADAQAAINALHGSQTMPGASSSLVVKFADTEKER 189
>gi|405963038|gb|EKC28647.1| CUG-BP- and ETR-3-like factor 2 [Crassostrea gigas]
Length = 647
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 115/188 (61%), Gaps = 10/188 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD I K++V +PR+ E D+R +FEE G V ++ + +DK TGQ +G CFV
Sbjct: 61 PDPDAI-------KMFVGQIPRSMDENDLRKMFEEFGAVYQLNVLRDKATGQSKGCCFVT 113
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F + A +A AL+ G I+++ AD E+ + KL+VG +SK+ S+ ++
Sbjct: 114 FYTRKAALDAQNALHNIKTMSGMHHPIQMKPADSEKRNE---ERKLFVGMISKKCSESDV 170
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+ +F+P+G IED I+RD+ QSRGCAFV +++R+ AL AI ++ + TM G P+VV+
Sbjct: 171 KMMFAPFGSIEDCTILRDQNGQSRGCAFVTYANRQSALNAIKNMHHSQTMEGCSSPVVVK 230
Query: 258 IADPKKPR 265
AD +K +
Sbjct: 231 FADTQKEK 238
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK--FTIFEEAGNAIR 149
+ + PV R ED R + HG + + +Q+G C K + + + R
Sbjct: 1 MLLQPVVRIGAAED-RSILGYHGAMSD---------SEQEGGCVKKSRLSSYSDGEIGTR 50
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
++NG ++ P K++VG + + + ++ ++F +G +
Sbjct: 51 SMNGQV----------------QKSEPDPDAIKMFVGQIPRSMDENDLRKMFEEFGAVYQ 94
Query: 210 IFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+ ++RD+ QS+GC FV F R+ AL A + L+ TM G P+ ++ AD +K
Sbjct: 95 LNVLRDKATGQSKGCCFVTFYTRKAALDAQNALHNIKTMSGMHHPIQMKPADSEK 149
>gi|359479768|ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
vinifera]
Length = 447
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 106/182 (58%), Gaps = 7/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE + +F+E V EV + KDK T +G CFV +EA A+ A
Sbjct: 16 KLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNA 75
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
+ PG + ++V++ADGE E HP P KL+VG L K S+ E+ +FS
Sbjct: 76 CHNKRTLPGASSPLQVKYADGELERLGVIFCHPCYPEHKLFVGMLPKNVSEAEVSSLFSK 135
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
YG I+D+ I+R + S+GCAF+++ +E ALAA+ +NG M GS PLVV+ AD +K
Sbjct: 136 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 195
Query: 264 PR 265
R
Sbjct: 196 ER 197
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDEL-KQSRGCAFVQFSHREMALAAISG 240
KL+VG + K ++ ++ +F + ++++ I++D+ + SRGC FV R+ A A++
Sbjct: 16 KLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNA 75
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTGEL 269
+ T+ G+ PL V+ AD + R G +
Sbjct: 76 CHNKRTLPGASSPLQVKYADGELERLGVI 104
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 75 FNHPA-PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV-VLPKDKRTGQQQG 132
F HP P+H KL+V +P+ +E ++ LF ++G + ++ +L ++T +G
Sbjct: 105 FCHPCYPEH--------KLFVGMLPKNVSEAEVSSLFSKYGTIKDLQILRGSQQT--SKG 154
Query: 133 YCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
F+K+ E+A A+ A+NG + G + V++AD E+E
Sbjct: 155 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 196
>gi|209878013|ref|XP_002140448.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556054|gb|EEA06099.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 546
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 178/410 (43%), Gaps = 78/410 (19%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HPAP+ + KL+V +PR E++++ LFE +GNV+ + + ++K TG +G V
Sbjct: 103 HPAPN------MEIKLFVGRIPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALV 156
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH---------PVAPPDKLYVGC 187
+A AIR LN + + +KV+++ GE E P KL+VG
Sbjct: 157 TMESIAQADYAIRELNLIKVLDNLRGPLKVQYSTGEAERFGFEAESCIPGVDQVKLFVGA 216
Query: 188 LSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFT 246
L K +++EI +VFSPYG I +IFI+R+ RGCAFV+++ +E L AI+ L+G T
Sbjct: 217 LPKNITEEEISDVFSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYAIASLHGAAT 276
Query: 247 MRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQILPNV 306
+ ++PL VR A + L + + N PP
Sbjct: 277 LGDVNRPLEVRFAS-RSSNANNLFLTHGLHHSAMAHN------PP--------------- 314
Query: 307 SYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQLSLQQIQIPRQNSQL 366
S HIFNN P N + +A P + S + S S R +
Sbjct: 315 SGSAYHIFNNRKPCHIVNDASYLSANPTVVGNILSHRGSCS-------------RNITLF 361
Query: 367 SQQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESESPRSGNNPQTSASASTIPTVPQSP 426
+S ++T N+ + H P SG+ ++A+A+ +
Sbjct: 362 DHNGIS---------VAATTNMYPRSRGH--------PLSGSPSNSTAAAAITANL---- 400
Query: 427 QVAASPECD--WSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQIEKQ 474
P C W E+ DG YY+N + ++W+ P E++ F +Q
Sbjct: 401 ----MPRCIGMWKEYFTSDGKPYYHNEISRVTQWEVPPEFMNFRPVFSRQ 446
>gi|320167253|gb|EFW44152.1| RNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 461
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VPRT E+D+RP+FEE G V+E+ + KD+ G +G F+ + E A A+ A
Sbjct: 50 KLFVGQVPRTMEEKDLRPVFEEFGPVVELTILKDRFNGLHKGCAFLTYASRESAQLAMAA 109
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+G + G ++V+ AD E + A KL++G +S+ S+ E+ +VF YG IEDI
Sbjct: 110 LHGVRVLQGMAHPLQVKPADREEK---AEARKLFLGMISRTASEDELRKVFEMYGDIEDI 166
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAF+++ RE A+AAIS L+G +M G PL+V+ AD + R
Sbjct: 167 AVLRQPDGTSKGCAFIKYRWREQAVAAISALHGRISMDGCPAPLIVKFADTDRERM 222
>gi|156352255|ref|XP_001622676.1| predicted protein [Nematostella vectensis]
gi|156209270|gb|EDO30576.1| predicted protein [Nematostella vectensis]
Length = 455
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 117/192 (60%), Gaps = 4/192 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VPRT E+D+RP+FE +G + E+ + KDK TGQ +G F+ F + A +
Sbjct: 21 KLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKGCAFLTFCSRDACNAAQKH 80
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E + + KL+VG +SK ++++ +FSP+G IE++
Sbjct: 81 LHEKKTLPGMHHPIQVKPADSETK---SDDRKLFVGMISKHAKEEDLRVMFSPFGTIEEL 137
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT-GEL 269
++R+ S+GCAF++F++R A AI+ ++ + TM G PLVV+ AD +K + ++
Sbjct: 138 TVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKM 197
Query: 270 RGNYAFGTPSFG 281
+ AFG +FG
Sbjct: 198 QHLAAFGGMAFG 209
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD N L++ +P+ T+ D+ F+ G VI + DK+T + + FV
Sbjct: 365 PGPDGSN-------LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVS 417
Query: 138 FTIFEEAGNAIRALNGHYI 156
+ A NAI+ +NG I
Sbjct: 418 YDNVMSAQNAIQHMNGFQI 436
>gi|443723647|gb|ELU11974.1| hypothetical protein CAPTEDRAFT_144233 [Capitella teleta]
Length = 461
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 134/273 (49%), Gaps = 37/273 (13%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD I K++V +PR+ E D+R +FEE G V ++ + +DK TGQ +G
Sbjct: 7 GKTEPDPDAI-------KMFVGQIPRSMDESDLRKMFEEFGPVFQLNVLRDKVTGQSKGC 59
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A L+ G Q I+++ AD E+ + KL+VG LSK+ +
Sbjct: 60 CFVTFYTRKSALEAQNQLHNIKTMAGMQHPIQMKPADCEKRNE---ERKLFVGMLSKKCN 116
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ E+ +F+P+G IE+ ++R++ QSRGCAFV ++ ++ A AI G++ + TM G P
Sbjct: 117 ENEVRMMFAPFGTIEECTVLREQNGQSRGCAFVTYASKQCAQNAIKGMHHSQTMEGCRFP 176
Query: 254 LVVRIADPKKPRT--------GELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQILPN 305
LVVR AD +K + L G GP +L +L
Sbjct: 177 LVVRFADTQKEKEMKKLQQMQANLLNTNLTGLAGLGPQYLN---------------LLQQ 221
Query: 306 VSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQL 338
S P + P SN GN + IQQ+
Sbjct: 222 ASSSP----GGNMPGGLSNLGNLGLSALQIQQI 250
>gi|225436819|ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
vinifera]
gi|296086641|emb|CBI32276.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE + +F+E V EV + KDK T +G CFV +EA A+ A
Sbjct: 16 KLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNA 75
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL+VG L K S+ E+ +FS YG I+D+
Sbjct: 76 CHNKRTLPGASSPLQVKYADGELER---LEHKLFVGMLPKNVSEAEVSSLFSKYGTIKDL 132
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+GCAF+++ +E ALAA+ +NG M GS PLVV+ AD +K R
Sbjct: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
>gi|325562907|gb|ADZ31337.1| cell size RNA recognition motif 2 [synthetic construct]
Length = 103
Score = 133 bits (335), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/100 (59%), Positives = 81/100 (81%)
Query: 164 IKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGC 223
I+VR+ADGERE A KL+V L+KQ + KEIEE+F+PYGH+ED++I++D ++QSRGC
Sbjct: 4 IQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRGC 63
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
FV+FS RE ALAA+S L+G + MRG +QPL++R ADPK+
Sbjct: 64 GFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKR 103
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 87 GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
I KL+VA + + AT ++I +F +G+V +V + KD Q +G FVKF+ E A
Sbjct: 18 AIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMR-QSRGCGFVKFSSREPALA 76
Query: 147 AIRALNGHYIFPGEQASIKVRFADGER 173
A+ AL+G+Y+ G + + +RFAD +R
Sbjct: 77 AMSALSGNYVMRGCEQPLIIRFADPKR 103
>gi|189241911|ref|XP_971057.2| PREDICTED: similar to bruno-3 CG12478-PA [Tribolium castaneum]
Length = 569
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+RP+FEE G + E + KDK TG +G F+ + E A NA A
Sbjct: 125 KLFVGQIPRHLEEDDLRPMFEEFGKIYEFTVLKDKYTGMHKGCAFLTYFSPESALNAQNA 184
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + PG I+V+ AD E KL+VG LSKQ +++++ ++F+P+G IE+
Sbjct: 185 LHEKHTLPGMNRPIQVKPADSENRG--GKDRKLFVGMLSKQQTEEDVRQLFAPFGTIEEC 242
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R S+GCAFV++S + A AAI+ L+G+ TM G+ LVV+ AD +K R
Sbjct: 243 TILRGPDGASKGCAFVKYSSHQEAQAAINSLHGSQTMPGASSSLVVKFADTEKER 297
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 74 GFNHPA----PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQ 129
G N P D N G KL+V + + TEED+R LF G + E + + G
Sbjct: 193 GMNRPIQVKPADSENRGGKDRKLFVGMLSKQQTEEDVRQLFAPFGTIEECTILRGP-DGA 251
Query: 130 QQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVK++ +EA AI +L+G PG +S+ V+FAD E+E
Sbjct: 252 SKGCAFVKYSSHQEAQAAINSLHGSQTMPGASSSLVVKFADTEKE 296
>gi|255559360|ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
gi|223540085|gb|EEF41662.1| RNA binding protein, putative [Ricinus communis]
Length = 436
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 104/175 (59%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE + +F+E V EV + KDK T +G CFV +EA A+ A
Sbjct: 16 KLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL+VG L K S+ E+ E+FS YG I+D+
Sbjct: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFVGMLPKNVSEAEVSELFSTYGTIKDL 132
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+GCAF+++ +E ALAA+ +NG M GS PLVV+ AD +K R
Sbjct: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
>gi|350417598|ref|XP_003491500.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
2-like [Bombus impatiens]
Length = 635
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 11/197 (5%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
I G P PD+I K++V VP E D+R LFEE G V ++ + +DK TG
Sbjct: 95 IMNNNGVEQPDPDNI-------KMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITG 147
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCL 188
+G CFV F + A +A AL+ F G + I+++ AD E + KL+VG L
Sbjct: 148 SHRGCCFVTFYTRKAALDAQNALHNVKTFSGMRHPIQMKPADSENRNE----RKLFVGML 203
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
SK+ S+ ++ +FS YG IE+ ++RD +S+ CAFV F+ ++ A+ AI L+ + TM
Sbjct: 204 SKKFSENDVRNMFSIYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTME 263
Query: 249 GSDQPLVVRIADPKKPR 265
G PLVV+ AD +K +
Sbjct: 264 GCSSPLVVKFADTQKEK 280
>gi|340718155|ref|XP_003397537.1| PREDICTED: CUGBP Elav-like family member 2-like [Bombus terrestris]
Length = 627
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 11/197 (5%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
I G P PD+I K++V VP E D+R LFEE G V ++ + +DK TG
Sbjct: 94 IMNNNGVEQPDPDNI-------KMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITG 146
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCL 188
+G CFV F + A +A AL+ F G + I+++ AD E + KL+VG L
Sbjct: 147 SHRGCCFVTFYTRKAALDAQNALHNVKTFSGMRHPIQMKPADSENRNE----RKLFVGML 202
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
SK+ S+ ++ +FS YG IE+ ++RD +S+ CAFV F+ ++ A+ AI L+ + TM
Sbjct: 203 SKKFSENDVRNMFSIYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTME 262
Query: 249 GSDQPLVVRIADPKKPR 265
G PLVV+ AD +K +
Sbjct: 263 GCSSPLVVKFADTQKEK 279
>gi|269785109|ref|NP_001161510.1| bruno-like protein [Saccoglossus kowalevskii]
gi|268053989|gb|ACY92481.1| bruno-like protein [Saccoglossus kowalevskii]
Length = 485
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 108/176 (61%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+RPLFEE+G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 37 KLFVGQIPRNLEEKDLRPLFEEYGRIYELTVLKDRFTGMHKGCAFLTYCDRDSALRAQSA 96
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E A KL+VG L+KQ ++ ++ +F P+G IE+
Sbjct: 97 LHEQKTLPGMNRPIQVKPADSESR---AEDRKLFVGMLNKQMTEDDVRAIFQPFGKIEEC 153
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTM-RGSDQPLVVRIADPKKPR 265
I+R S+GCAFV+F ++ ALAAI+ +NG+ T+ +G+ +VV+ AD +K R
Sbjct: 154 TILRGPDGVSKGCAFVKFGSKQEALAAINNINGSRTLPQGASSAIVVKFADTEKER 209
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TE+D+R +F+ G + E + + G +G FVKF +EA AI
Sbjct: 125 KLFVGMLNKQMTEDDVRAIFQPFGKIEECTILRGP-DGVSKGCAFVKFGSKQEALAAINN 183
Query: 151 LNGHYIFP-GEQASIKVRFADGEREHPV 177
+NG P G ++I V+FAD E+E +
Sbjct: 184 INGSRTLPQGASSAIVVKFADTEKERQI 211
>gi|356535559|ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B-like [Glycine max]
Length = 429
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 3/176 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ E+++ +F+E V EV + +DK + +G CFV EEA A+
Sbjct: 16 VKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRASRGCCFVICPSREEADKAVN 75
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
A + PG + ++V++ADGE E KL++G L K S+ E+ ++FS YG I+D
Sbjct: 76 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNISEDEVSDLFSMYGTIKD 132
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R + S+GCAF+++ +E ALAA+ +NG TM GS PLVV+ AD +K R
Sbjct: 133 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHTMEGSSVPLVVKWADTEKER 188
>gi|356505495|ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 431
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE ++ +F+E V EV + KDK T +G CFV EEA A+ A
Sbjct: 16 KLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVNA 75
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL++G L K S+ EI +FS YG I+D+
Sbjct: 76 CHNKRTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEVEISALFSKYGTIKDL 132
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+GCAF+++ +E AL A+ +NG M GS PLVV+ AD +K R
Sbjct: 133 QILRGSQQTSKGCAFLKYETKEQALTALEAINGKHKMEGSSVPLVVKWADTEKER 187
>gi|148228597|ref|NP_001084196.1| CUGBP Elav-like family member 1-A [Xenopus laevis]
gi|82227733|sp|O57406.1|CEL1A_XENLA RecName: Full=CUGBP Elav-like family member 1-A; Short=CELF-1A;
AltName: Full=Bruno-like protein 2-A; AltName: Full=CUG
triplet repeat RNA-binding protein 1-A; Short=CUG-BP1-A;
AltName: Full=CUG-BP- and ETR-3-like factor 1-A;
AltName: Full=Embryo deadenylation element-binding
protein A; Short=EDEN-BP-A; AltName: Full=RNA-binding
protein BRUNOL-2-A; AltName: Full=p53/p55
gi|2781419|gb|AAC41243.1| embryo deadenylation element binding protein [Xenopus laevis]
gi|80478529|gb|AAI08575.1| CUGBP1 protein [Xenopus laevis]
Length = 489
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 112/192 (58%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+HP PD I K++V VPR+ +E+++R LFE++G V E+ + +D+ Q +G
Sbjct: 9 DHPDPDSI-------KMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CF+ F + A A AL+ + PG I+++ AD E+ + V KL++G +SK +
Sbjct: 62 CFITFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMVSKNCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV F+ R MA AI ++ TM G P
Sbjct: 121 ENDIRAMFSPFGQIEECRILRGPDGMSRGCAFVTFTTRSMAQMAIKSMHQAQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P PD K++VG + + S+KE+ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTMDHPDHPDPDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
F+ F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFITFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
>gi|325189112|emb|CCA23638.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 550
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P KL++ VPRT TE ++ P+ E G V+++ + +DK TG +G F F E+A A+
Sbjct: 75 PMKLFIGQVPRTMTETELLPILEAFGEVVDLTIIRDKLTGSHRGCAFASFASPEDAERAV 134
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
L+ P ++VR A+G+ A KL++G + K +++ I ++F +G I+
Sbjct: 135 EELHNKVTLPDSINPLQVRPAEGQAG--AAQEHKLFIGMIPKTATEQAIYDIFGEFGPID 192
Query: 209 DIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTG 267
++FI+R + QS+GCAF++F RE A+A+I LNG TM PLVV+ AD ++ R
Sbjct: 193 EVFILRHQPTGQSKGCAFLKFKERESAVASIEQLNGKITMMNGVSPLVVKFADSRRQRLQ 252
Query: 268 ELR 270
+R
Sbjct: 253 RVR 255
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFVQFS 229
G P P KL++G + + ++ E+ + +G + D+ I+RD+L S RGCAF F+
Sbjct: 66 GMMNDPYKNPMKLFIGQVPRTMTETELLPILEAFGEVVDLTIIRDKLTGSHRGCAFASFA 125
Query: 230 HREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
E A A+ L+ T+ S PL VR A+
Sbjct: 126 SPEDAERAVEELHNKVTLPDSINPLQVRPAE 156
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +P T+ D+ F G VI + DK TG+ +G+ FV + E A NAI
Sbjct: 404 ANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKLTGESKGFGFVSYDAAEAADNAIA 463
Query: 150 ALNGHYI 156
++NG I
Sbjct: 464 SMNGFQI 470
>gi|348545316|ref|XP_003460126.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 2
[Oreochromis niloticus]
Length = 485
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 127/237 (53%), Gaps = 22/237 (9%)
Query: 81 DHINDSGIPA-KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVK 137
DH + I A K++V +PR+ +EE +R LFE +G V E+ + +D+ Q +G CFV
Sbjct: 6 DHPDQPDIDAIKMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVT 65
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
+ + A A AL+ I PG I+++ AD E+ + V KL++G +SK+ ++ +I
Sbjct: 66 YYSRKSALEAQNALHNMKILPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCNENDI 124
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+FSPYG IE+ I+R SRGCAFV F+ R+MA +AI ++ + TM G P+VV+
Sbjct: 125 RLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVK 184
Query: 258 IADPKKPR-----------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGNS 297
AD +K + + GN G S GP +L + + GN+
Sbjct: 185 FADTQKDKEQKRMAQQLQQQMQQLSAASMWGNLT-GLNSLGPQYLALLHQSASTGNA 240
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + E DIR +F +G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT + A +AI++++ G + I V+FAD +++
Sbjct: 155 FTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKD 191
>gi|302786984|ref|XP_002975262.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
gi|300156836|gb|EFJ23463.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
Length = 427
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 79 APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKF 138
APD + KL+V +P+ T+E++ P+FEE G V ++ + KDK T Q +G CF+ +
Sbjct: 7 APDAV-------KLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTY 59
Query: 139 TIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIE 198
+ EA NAI + + ++V++ADGE E KL++G L K ++ E+
Sbjct: 60 SSRSEADNAIDLFHNKKTISPMNSPMQVKYADGELERL---EHKLFIGMLPKSVTEAEVR 116
Query: 199 EVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
+VFS YG+I+++ +++ + ++ CAF+++ RE A A+ LNG + M G+ LVV+
Sbjct: 117 DVFSEYGNIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYRMEGASSALVVKW 176
Query: 259 ADPKKPR 265
AD +K R
Sbjct: 177 ADTEKER 183
>gi|348527714|ref|XP_003451364.1| PREDICTED: CUGBP Elav-like family member 5-like [Oreochromis
niloticus]
Length = 529
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 4/202 (1%)
Query: 65 PMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD 124
P P G + HP ++ D KL++ +PR E+D++PLFE+ G + E+ + KD
Sbjct: 54 PKPMNGSEPISIHPESGNMKDQDA-IKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKD 112
Query: 125 KRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLY 184
+ TG +G F+ + E A A AL+ PG I+V+ AD E KL+
Sbjct: 113 RYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESR---GEDRKLF 169
Query: 185 VGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGT 244
VG L+KQ +++++ +F PYG IE+ ++R S+GCAFV+FS A +AIS L+G+
Sbjct: 170 VGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGS 229
Query: 245 FTMRGSDQPLVVRIADPKKPRT 266
TM G+ LVV+ AD K RT
Sbjct: 230 QTMPGASSSLVVKFADTDKERT 251
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TEED+ LFE +G + E + + G +G FVKF+ EA +AI A
Sbjct: 167 KLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPD-GNSKGCAFVKFSTHTEAQSAISA 225
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 226 LHGSQTMPGASSSLVVKFADTDKERTI 252
>gi|302811484|ref|XP_002987431.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
gi|300144837|gb|EFJ11518.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
Length = 428
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 79 APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKF 138
APD + KL+V +P+ T+E++ P+FEE G V ++ + KDK T Q +G CF+ +
Sbjct: 7 APDAV-------KLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTY 59
Query: 139 TIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIE 198
+ EA NAI + + ++V++ADGE E KL++G L K ++ E+
Sbjct: 60 SSRSEADNAIDLFHNKKTISPMNSPMQVKYADGELERL---EHKLFIGMLPKSVTEAEVR 116
Query: 199 EVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
+VFS YG+I+++ +++ + ++ CAF+++ RE A A+ LNG + M G+ LVV+
Sbjct: 117 DVFSEYGNIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYRMEGASSALVVKW 176
Query: 259 ADPKKPR 265
AD +K R
Sbjct: 177 ADTEKER 183
>gi|401397143|ref|XP_003879991.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
gi|325114399|emb|CBZ49956.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
Length = 475
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 16/222 (7%)
Query: 67 PFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKR 126
P G R H AP + KL+V VP++ + +RP+FEE G V E V+ +DK
Sbjct: 20 PLGGSSRPTGHMAPH------VEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKA 73
Query: 127 TGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE---------HPV 177
TG+ + FVK A AIR LN I I V++A GE E P
Sbjct: 74 TGKHKNSAFVKMGSIAAADAAIRGLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPG 133
Query: 178 APPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMALA 236
KL++G + + ++ E+ + FS YG +E++F+++D ++ + +GC FV+F+ +E AL
Sbjct: 134 QDQAKLFIGSIPRMMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTP 278
A+ L+G T G +P+ VR A+ K R +L G P
Sbjct: 194 AVRTLSGKHTFEGCSRPVEVRFAESKAARQQQLLNQQGMGGP 235
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 84 NDSGIP-AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFE 142
N G P A ++V VP T D+ F GNV+ + D+ TG+ +G+ FV + E
Sbjct: 338 NAEGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVE 397
Query: 143 EAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
A A+ +NG F +KV GE ++
Sbjct: 398 SAATAVNNMNG---FMAGGKRLKVSVKKGEEQY 427
>gi|410921166|ref|XP_003974054.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 3 [Takifugu
rubripes]
Length = 491
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 4/202 (1%)
Query: 65 PMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD 124
P P G + HP ++ D KL++ +PR E+D++PLFE+ G + E+ + KD
Sbjct: 54 PKPMNGSEPISIHPESGNMKDQDA-IKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKD 112
Query: 125 KRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLY 184
+ TG +G F+ + E A A AL+ PG I+V+ AD E KL+
Sbjct: 113 RYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESR---GEDRKLF 169
Query: 185 VGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGT 244
VG L+KQ +++++ +F PYG IE+ ++R S+GCAFV+FS A +AIS L+G+
Sbjct: 170 VGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGS 229
Query: 245 FTMRGSDQPLVVRIADPKKPRT 266
TM G+ LVV+ AD K RT
Sbjct: 230 QTMPGASSSLVVKFADTDKERT 251
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TEED+ LFE +G + E + + G +G FVKF+ EA +AI A
Sbjct: 167 KLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPD-GNSKGCAFVKFSTHTEAQSAISA 225
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 226 LHGSQTMPGASSSLVVKFADTDKERTI 252
>gi|410921168|ref|XP_003974055.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 4 [Takifugu
rubripes]
Length = 471
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 4/202 (1%)
Query: 65 PMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD 124
P P G + HP ++ D KL++ +PR E+D++PLFE+ G + E+ + KD
Sbjct: 54 PKPMNGSEPISIHPESGNMKDQDA-IKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKD 112
Query: 125 KRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLY 184
+ TG +G F+ + E A A AL+ PG I+V+ AD E KL+
Sbjct: 113 RYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESR---GEDRKLF 169
Query: 185 VGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGT 244
VG L+KQ +++++ +F PYG IE+ ++R S+GCAFV+FS A +AIS L+G+
Sbjct: 170 VGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGS 229
Query: 245 FTMRGSDQPLVVRIADPKKPRT 266
TM G+ LVV+ AD K RT
Sbjct: 230 QTMPGASSSLVVKFADTDKERT 251
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TEED+ LFE +G + E + + G +G FVKF+ EA +AI A
Sbjct: 167 KLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPD-GNSKGCAFVKFSTHTEAQSAISA 225
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 226 LHGSQTMPGASSSLVVKFADTDKERTI 252
>gi|380013066|ref|XP_003690591.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis florea]
Length = 582
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD+I K++V VP E D+R LFEE G V ++ + +DK TG +G CFV
Sbjct: 81 PDPDNI-------KMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVT 133
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F + A +A AL+ F G + I+++ AD E + KL+VG LSK+ ++ ++
Sbjct: 134 FYTRKAALDAQNALHNVKTFNGMRHPIQMKPADSENRNE----RKLFVGMLSKKFTENDV 189
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+FS YG IE+ ++RD +S+ CAFV F+ ++ A+ AI L+ + TM G PLVV+
Sbjct: 190 RNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVK 249
Query: 258 IADPKKPR 265
AD +K +
Sbjct: 250 FADTQKEK 257
>gi|348508140|ref|XP_003441613.1| PREDICTED: CUGBP Elav-like family member 4-like [Oreochromis
niloticus]
Length = 524
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D+RPLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 52 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNA 111
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G IE+
Sbjct: 112 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFESFGSIEEC 168
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAIS L+G+ TM G+ LVV+ AD K RT
Sbjct: 169 TILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERT 224
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +E+D+R LFE G++ E + + G
Sbjct: 120 GMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEECTILRGP-DGNS 178
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVK++ EA AI AL+G PG +S+ V+FAD ++E +
Sbjct: 179 KGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTI 225
>gi|326675888|ref|XP_003200459.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Danio rerio]
Length = 516
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 8/197 (4%)
Query: 70 GRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQ 129
GR G P DH D+ KL++ +PR E+D++PLFEE G + E+ + KD+ TG
Sbjct: 19 GRMNGLTIPLKDH--DA---IKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGM 73
Query: 130 QQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLS 189
+G F+ + E A A AL+ PG I+V+ AD E KL+VG L
Sbjct: 74 HKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSEGR---GEERKLFVGMLG 130
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
KQ ++++ +F +G IE+ ++R S+GCAFV+FS A AAI+ L+G TM G
Sbjct: 131 KQQCEEDVRCLFEAFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPG 190
Query: 250 SDQPLVVRIADPKKPRT 266
+ LVV+ AD K RT
Sbjct: 191 ASSSLVVKFADTDKERT 207
>gi|410921162|ref|XP_003974052.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Takifugu
rubripes]
Length = 528
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 4/202 (1%)
Query: 65 PMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD 124
P P G + HP ++ D KL++ +PR E+D++PLFE+ G + E+ + KD
Sbjct: 54 PKPMNGSEPISIHPESGNMKDQDA-IKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKD 112
Query: 125 KRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLY 184
+ TG +G F+ + E A A AL+ PG I+V+ AD E KL+
Sbjct: 113 RYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESR---GEDRKLF 169
Query: 185 VGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGT 244
VG L+KQ +++++ +F PYG IE+ ++R S+GCAFV+FS A +AIS L+G+
Sbjct: 170 VGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGS 229
Query: 245 FTMRGSDQPLVVRIADPKKPRT 266
TM G+ LVV+ AD K RT
Sbjct: 230 QTMPGASSSLVVKFADTDKERT 251
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TEED+ LFE +G + E + + G +G FVKF+ EA +AI A
Sbjct: 167 KLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPD-GNSKGCAFVKFSTHTEAQSAISA 225
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 226 LHGSQTMPGASSSLVVKFADTDKERTI 252
>gi|363744108|ref|XP_003642976.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 454
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 142
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 143 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 202
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 203 SQTMPGASSSLVVKFADTDKERT 225
>gi|219109993|ref|XP_002176749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411284|gb|EEC51212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 499
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 109/184 (59%), Gaps = 7/184 (3%)
Query: 84 NDSG--IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIF 141
ND G P KL+V VP+ +EED+ P F+ G + +V + +DK TG +G FV +
Sbjct: 115 NDDGEDDPMKLFVGQVPKAMSEEDVFPTFDSFGPLKDVAIIRDKHTGLHRGCAFVTYWSA 174
Query: 142 EEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
+A A AL+ + FPG + + +V+ A+ P P +KL+VG LS++ ++ EI E+F
Sbjct: 175 ADAERAQEALHDTFTFPGARRAAQVKPAE-----PSVPENKLFVGMLSRKATEVEIRELF 229
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
P+G I +++++R+ S+ AF+++ R A+ AI LN + M G+ +PL+VR AD
Sbjct: 230 EPFGEIREVYMIRNADGSSKCAAFLRYMKRGAAVQAIETLNNIYMMEGAARPLIVRFADN 289
Query: 262 KKPR 265
K R
Sbjct: 290 KHQR 293
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L+V +P T+ D+ F GNVI + DK +G+ +G+ FV + A AI
Sbjct: 400 ANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDKYSGESKGFGFVSYDSVIAAEAAIE 459
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAP 179
+NG I +KV+ HP AP
Sbjct: 460 QMNGFQI---GNKRLKVQHKRVHGNHPNAP 486
>gi|212286102|ref|NP_001131056.1| CUGBP, Elav-like family member 5 [Xenopus laevis]
gi|197359138|gb|ACH69785.1| RNA binding protein Bruno-like 5 [Xenopus laevis]
Length = 484
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 119/235 (50%), Gaps = 15/235 (6%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFE+ G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG LSKQ S++E+ +F +G IE+
Sbjct: 107 LHEQKTLPGMARPIQVKPADSESR---GGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ AD K RT
Sbjct: 164 SVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRM 223
Query: 271 GNYAFGTPSFGPNFLEPVRP------------PPNLGNSAGGQILPNVSYRPQHI 313
F P+ P+ P L S G + P+V++ HI
Sbjct: 224 QQMVGQLGIFTPSLALPISPYSAYAQALMQQQTTVLSTSHGSYLSPSVAFPSCHI 278
>gi|432858764|ref|XP_004068927.1| PREDICTED: CUGBP Elav-like family member 4-like [Oryzias latipes]
Length = 505
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D+RPLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 52 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNA 111
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G IE+
Sbjct: 112 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFESFGSIEEC 168
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAIS L+G+ TM G+ LVV+ AD K RT
Sbjct: 169 TILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERT 224
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +E+D+R LFE G++ E + + G
Sbjct: 120 GMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIEECTILRGP-DGNS 178
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVK++ EA AI AL+G PG +S+ V+FAD ++E +
Sbjct: 179 KGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTI 225
>gi|62857945|ref|NP_001017152.1| CUGBP Elav-like family member 1 [Xenopus (Silurana) tropicalis]
gi|123910258|sp|Q28HE9.1|CELF1_XENTR RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|89272922|emb|CAJ82289.1| CUG triplet repeat, RNA binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 490
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 126/240 (52%), Gaps = 28/240 (11%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+HP PD I K++V VPR+ +E+++R LFE++G V E+ + +D+ Q +G
Sbjct: 9 DHPDPDSI-------KMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CF+ F + A A AL+ + PG I+++ AD E+ + V KL+VG +SK+ +
Sbjct: 62 CFITFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFVGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FS +G IE+ I+R SRGCAFV F+ R MA AI ++ TM G P
Sbjct: 121 ENDIRAMFSQFGQIEESRILRGPDGMSRGCAFVTFTTRSMAQMAIKAMHQAQTMEGCSSP 180
Query: 254 LVVRIADPKKPR-----------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+VV+ AD +K + + GN A G S P +L ++ + GN
Sbjct: 181 IVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLA-GLSSLAPQYLALLQQTASSGN 239
>gi|410921164|ref|XP_003974053.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Takifugu
rubripes]
Length = 500
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 3/202 (1%)
Query: 65 PMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD 124
P P G + HP ++ D KL++ +PR E+D++PLFE+ G + E+ + KD
Sbjct: 54 PKPMNGSEPISIHPESGNMKDQDA-IKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKD 112
Query: 125 KRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLY 184
+ TG +G F+ + E A A AL+ PG I+V+ AD E KL+
Sbjct: 113 RYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRG--GKDRKLF 170
Query: 185 VGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGT 244
VG L+KQ +++++ +F PYG IE+ ++R S+GCAFV+FS A +AIS L+G+
Sbjct: 171 VGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGS 230
Query: 245 FTMRGSDQPLVVRIADPKKPRT 266
TM G+ LVV+ AD K RT
Sbjct: 231 QTMPGASSSLVVKFADTDKERT 252
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TEED+ LFE +G + E + + G +G FVKF+ EA +AI A
Sbjct: 168 KLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPD-GNSKGCAFVKFSTHTEAQSAISA 226
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 227 LHGSQTMPGASSSLVVKFADTDKERTI 253
>gi|91090137|ref|XP_976135.1| PREDICTED: similar to arrest CG31762-PC isoform 4 [Tribolium
castaneum]
Length = 494
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V VPR+ E D+R +FEE+G V + + +DK TG +G CFV F + A A A
Sbjct: 94 KMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFTRKAALQAQDA 153
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ G I+++ AD E + KL+VG LSK+ + ++ +FS YG IE+
Sbjct: 154 LHNVKTLNGMHHPIQMKPADSENRNE----RKLFVGMLSKKLCENDVRTLFSGYGTIEEC 209
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++RD S+GCAFV F+ ++ AL+AI L+ + TM G PLVV+ AD +K +
Sbjct: 210 TVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQTMEGCSAPLVVKFADTQKEK 264
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 172 EREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSH 230
E+E P + K++VG + + + ++ +F YG + I ++RD+ S+GC FV F
Sbjct: 84 EQEQPDSDTIKMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFT 143
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIAD 260
R+ AL A L+ T+ G P+ ++ AD
Sbjct: 144 RKAALQAQDALHNVKTLNGMHHPIQMKPAD 173
>gi|207028397|ref|NP_001128708.1| CUGBP, Elav-like family member 4 [Xenopus laevis]
gi|197359136|gb|ACH69784.1| RNA binding protein Bruno-like 4 [Xenopus laevis]
Length = 471
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 112/203 (55%), Gaps = 10/203 (4%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 27 GHMNGLNHHSPGGA-ASTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 142
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 143 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 202
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 203 SQTMPGASSSLVVKFADTDKERT 225
>gi|328780076|ref|XP_003249751.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis mellifera]
Length = 628
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD+I K++V VP E D+R LFEE G V ++ + +DK TG +G CFV
Sbjct: 104 PDPDNI-------KMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVT 156
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F + A +A AL+ F G + I+++ AD E + KL+VG LSK+ ++ ++
Sbjct: 157 FYTRKAALDAQNALHNVKTFNGMRHPIQMKPADSENRNE----RKLFVGMLSKKFTENDV 212
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+FS YG IE+ ++RD +S+ CAFV F+ ++ A+ AI L+ + TM G PLVV+
Sbjct: 213 RNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVK 272
Query: 258 IADPKKPR 265
AD +K +
Sbjct: 273 FADTQKEK 280
>gi|194217895|ref|XP_001492139.2| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Equus
caballus]
gi|345783918|ref|XP_533186.3| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Canis lupus
familiaris]
gi|410973721|ref|XP_003993296.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Felis catus]
Length = 482
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 196 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 239
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|195546832|ref|NP_001124260.1| CUGBP Elav-like family member 5 [Danio rerio]
gi|190339155|gb|AAI63416.1| Brunol5 protein [Danio rerio]
Length = 528
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 4/202 (1%)
Query: 65 PMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD 124
P P G + HP + D KL++ +PR E+D++PLFE+ G + E+ + KD
Sbjct: 54 PKPMNGSESISIHPENGTMKDQDA-IKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKD 112
Query: 125 KRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLY 184
+ TG +G F+ + E A A AL+ PG I+V+ AD E KL+
Sbjct: 113 RYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESR---GEDRKLF 169
Query: 185 VGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGT 244
VG L+KQ +++++ +F PYG IE+ ++R S+GCAFV+FS A +AIS L+G+
Sbjct: 170 VGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGS 229
Query: 245 FTMRGSDQPLVVRIADPKKPRT 266
TM G+ LVV+ AD K RT
Sbjct: 230 QTMPGASSSLVVKFADTDKERT 251
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TEED+ LFE +G + E + + G +G FVKF+ EA +AI A
Sbjct: 167 KLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPD-GNSKGCAFVKFSTHAEAQSAISA 225
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 226 LHGSQTMPGASSSLVVKFADTDKERTI 252
>gi|118103587|ref|XP_001231325.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 2 [Gallus
gallus]
Length = 483
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 114/210 (54%), Gaps = 16/210 (7%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE-------HP 176
D+ TG +G F+ + E A A AL+ PG I+V+ AD E P
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSCCLRQP 145
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
KL+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A A
Sbjct: 146 CTKDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQA 205
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
AI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 206 AINALHGSQTMPGASSSLVVKFADTDKERT 235
>gi|441646598|ref|XP_004090758.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|383415255|gb|AFH30841.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939404|gb|AFI33307.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|387540328|gb|AFJ70791.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410259332|gb|JAA17632.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298516|gb|JAA27858.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357404|gb|JAA44564.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 509
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 222
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 223 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 266
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|395815677|ref|XP_003781351.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 510
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 222
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 223 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 266
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|147902406|ref|NP_001090639.1| CUGBP Elav-like family member 5 [Xenopus (Silurana) tropicalis]
gi|152013396|sp|A0JM51.1|CELF5_XENTR RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|117558445|gb|AAI25740.1| brunol5 protein [Xenopus (Silurana) tropicalis]
Length = 486
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 119/235 (50%), Gaps = 15/235 (6%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFE+ G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 48 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTA 107
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG LSKQ S++E+ +F +G IE+
Sbjct: 108 LHEQKTLPGMARPIQVKPADSESR---GGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEEC 164
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ AD K RT
Sbjct: 165 SVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRM 224
Query: 271 GNYAFGTPSFGPNFLEPVRP------------PPNLGNSAGGQILPNVSYRPQHI 313
F P+ P+ P L S G + P+V++ HI
Sbjct: 225 QQMVGQLGIFTPSLALPISPYSAYAQALMQQQTTVLSTSHGSYLSPSVAFPSCHI 279
>gi|291394300|ref|XP_002713553.1| PREDICTED: bruno-like 4, RNA binding protein-like [Oryctolagus
cuniculus]
Length = 485
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREH----PVAPPD---KLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P PP KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCPRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|343961815|dbj|BAK62495.1| CUG triplet repeat RNA-binding protein 1 [Pan troglodytes]
Length = 483
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 196 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 239
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|38570081|ref|NP_941989.1| CUGBP Elav-like family member 1 isoform 2 [Homo sapiens]
gi|332259916|ref|XP_003279030.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|402893568|ref|XP_003909964.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Papio anubis]
gi|8745537|gb|AAF78956.1|AF267534_1 CUG-binding protein A isoform [Homo sapiens]
gi|21411010|gb|AAH31079.1| CUG triplet repeat, RNA binding protein 1 [Homo sapiens]
gi|119588317|gb|EAW67911.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_f [Homo
sapiens]
gi|123994083|gb|ABM84643.1| CUG triplet repeat, RNA binding protein 1 [synthetic construct]
Length = 483
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 196 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 239
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|5729794|ref|NP_006551.1| CUGBP Elav-like family member 1 isoform 1 [Homo sapiens]
gi|402893570|ref|XP_003909965.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Papio anubis]
gi|1518802|gb|AAC50895.1| CUG-BP/hNab50 [Homo sapiens]
gi|119588313|gb|EAW67907.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Homo
sapiens]
gi|380783235|gb|AFE63493.1| CUGBP Elav-like family member 1 isoform 1 [Macaca mulatta]
gi|410222890|gb|JAA08664.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 482
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 196 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 239
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|118103585|ref|XP_001231286.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Gallus
gallus]
Length = 504
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 142
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 143 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 202
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 203 SQTMPGASSSLVVKFADTDKERT 225
>gi|395815679|ref|XP_003781352.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 482
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 196 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 239
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|291384970|ref|XP_002709144.1| PREDICTED: CUG triplet repeat, RNA-binding protein 1-like
[Oryctolagus cuniculus]
Length = 483
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 196 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 239
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|432853509|ref|XP_004067742.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Oryzias
latipes]
Length = 489
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Query: 62 NGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVL 121
N P P G + HP + D KL++ +PR E+D++PLFE+ G + E+ +
Sbjct: 50 NPSPKPMNGSEPICIHPESGAMKDQDA-IKLFIGQIPRNLEEKDLKPLFEQFGKIHELTV 108
Query: 122 PKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD 181
KD+ TG +G F+ + E A A AL+ PG I+V+ AD E
Sbjct: 109 LKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESR---GEDR 165
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG L+KQ +++++ +F PYG IE+ ++R S+GCAFV+FS A +AI L
Sbjct: 166 KLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGAL 225
Query: 242 NGTFTMRGSDQPLVVRIADPKKPRT 266
+G+ TM G+ LVV+ AD K RT
Sbjct: 226 HGSQTMPGASSSLVVKFADTDKERT 250
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TEED+ LFE +G VIE G +G FVKF+ EA +AI A
Sbjct: 166 KLFVGMLNKQQTEEDVYRLFEPYG-VIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGA 224
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 225 LHGSQTMPGASSSLVVKFADTDKERTI 251
>gi|363744106|ref|XP_003642975.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 445
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 142
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 143 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 202
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 203 SQTMPGASSSLVVKFADTDKERT 225
>gi|18858491|ref|NP_571688.1| CUGBP Elav-like family member 1 [Danio rerio]
gi|82247731|sp|Q9IBD0.1|CELF1_DANRE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=EDEN-BP/Bruno-like protein; AltName:
Full=RNA-binding protein BRUNOL-2
gi|7670538|dbj|BAA95119.1| brul [Danio rerio]
Length = 501
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V +PRT +E+ +R LFE +G V E+ + +D+ Q +G CFV + + A A
Sbjct: 17 KMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + V KL+VG +SK+ ++ +I +FSPYG IE
Sbjct: 77 NALHNMKILPGMHHPIQMKPADSEKNNAV-EDRKLFVGMISKKCNENDIRLMFSPYGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R+MA +AI ++ + TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDK 192
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+ ++ E+F PYG + +I ++RD + QS+GC
Sbjct: 2 NGSLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV + R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTYYTRKSALEAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL+V + + E DIR +F +G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT + A +AI++++ G + I V+FAD +++
Sbjct: 155 FTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKD 191
>gi|432853507|ref|XP_004067741.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Oryzias
latipes]
Length = 529
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Query: 62 NGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVL 121
N P P G + HP + D KL++ +PR E+D++PLFE+ G + E+ +
Sbjct: 50 NPSPKPMNGSEPICIHPESGAMKDQDA-IKLFIGQIPRNLEEKDLKPLFEQFGKIHELTV 108
Query: 122 PKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD 181
KD+ TG +G F+ + E A A AL+ PG I+V+ AD E
Sbjct: 109 LKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESR---GEDR 165
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG L+KQ +++++ +F PYG IE+ ++R S+GCAFV+FS A +AI L
Sbjct: 166 KLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGAL 225
Query: 242 NGTFTMRGSDQPLVVRIADPKKPRT 266
+G+ TM G+ LVV+ AD K RT
Sbjct: 226 HGSQTMPGASSSLVVKFADTDKERT 250
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TEED+ LFE +G VIE G +G FVKF+ EA +AI A
Sbjct: 166 KLFVGMLNKQQTEEDVYRLFEPYG-VIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGA 224
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 225 LHGSQTMPGASSSLVVKFADTDKERTI 251
>gi|118103583|ref|XP_424495.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 3 [Gallus
gallus]
Length = 492
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 142
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 143 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 202
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 203 SQTMPGASSSLVVKFADTDKERT 225
>gi|410930632|ref|XP_003978702.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 376
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 123/226 (54%), Gaps = 21/226 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V +PR+ +EE +R LFE +G V E+ + +D+ Q +G CFV + + A A
Sbjct: 17 KMFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + V KL++G +SK+ ++ +I +FSPYG IE
Sbjct: 77 NALHNMKILPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCNENDIRLMFSPYGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R+MA +AI ++ + TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGNS 297
+ GN G S GP +L ++ + GN+
Sbjct: 196 RMVQQLQQQMQQLSAASIWGNLT-GLNSLGPQYLALLQHSASSGNA 240
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + E DIR +F +G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT + A +AI++++ G + I V+FAD +++
Sbjct: 155 FTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKD 191
>gi|363744104|ref|XP_003642974.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 491
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 142
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 143 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 202
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 203 SQTMPGASSSLVVKFADTDKERT 225
>gi|363744101|ref|XP_003642973.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 472
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 142
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 143 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 202
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 203 SQTMPGASSSLVVKFADTDKERT 225
>gi|363737471|ref|XP_425051.3| PREDICTED: CUGBP Elav-like family member 3 [Gallus gallus]
Length = 445
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F P+G IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAIS L+G+ TM G+ LVV+ AD K RT
Sbjct: 125 TILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERT 180
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 76 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGP-DGAS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVK++ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 135 KGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTL 181
>gi|119588316|gb|EAW67910.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_e [Homo
sapiens]
Length = 283
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 21/225 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAVED-RKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
+ GN A G + GP +L ++ + GN
Sbjct: 196 RMAQQLQQQMQQISAASVWGNLA-GLNTLGPQYLALLQQTASSGN 239
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|356572661|ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
Length = 429
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE ++ +F+E V EV + KDK T +G CF+ EEA A+ A
Sbjct: 14 KLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEADKAVNA 73
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL++G L K S+ EI +FS YG I+D+
Sbjct: 74 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEVEISALFSKYGTIKDL 130
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+GCAF+++ +E ALAA+ +NG M S PLVV+ AD +K R
Sbjct: 131 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEDSSVPLVVKWADTEKER 185
>gi|363744110|ref|XP_003642977.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 465
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 142
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 143 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 202
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 203 SQTMPGASSSLVVKFADTDKERT 225
>gi|356500250|ref|XP_003518946.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 426
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ +E+++ +F+E V EV + +DK T +G CFV EEA A+
Sbjct: 15 VKLFVGQVPKRMSEDEVLAMFKELALVDEVNIIRDKATRASRGCCFVICPSREEADKAVN 74
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
A + PG + ++V++ADGE E KL++G L K S+ E+ +FS YG I+D
Sbjct: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNISEDEVSNLFSKYGTIKD 131
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R S+GCAF+++ +E A A+ +NG TM GS PLVV+ AD +K R
Sbjct: 132 LQILRGSQHTSKGCAFLKYETKEQAFTALEAINGKHTMEGSSVPLVVKWADTEKER 187
>gi|145306688|gb|ABP57108.1| CUG-BP and ETR-3-like factor 6 [Gallus gallus]
Length = 445
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F P+G IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAIS L+G+ TM G+ LVV+ AD K RT
Sbjct: 125 TILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERT 180
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 76 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGP-DGAS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVK++ EA AI +L+G PG +S+ V+FAD ++E
Sbjct: 135 KGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKER 179
>gi|449514107|ref|XP_002187309.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Taeniopygia
guttata]
Length = 492
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 86 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGD----RKL 141
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 142 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 201
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 202 SQTMPGASSSLVVKFADTDKERT 224
>gi|449502234|ref|XP_002199924.2| PREDICTED: CUGBP Elav-like family member 1 [Taeniopygia guttata]
Length = 485
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 21/214 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + V KL++G +SK+ ++ +I +FSP+G IE
Sbjct: 77 NALHNMKILPGMHHPIQMKPADSEKSNAV-EDRKLFIGMISKKCNENDIRVMFSPFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFL 285
+ GN A G + GP +L
Sbjct: 196 RIAQQLQQQMQQISAASIWGNLA-GLNTLGPQYL 228
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + +K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKSNAVEDR 108
>gi|224128620|ref|XP_002320377.1| predicted protein [Populus trichocarpa]
gi|222861150|gb|EEE98692.1| predicted protein [Populus trichocarpa]
Length = 432
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 104/175 (59%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE ++ +F++ V EV + KDK T +G CF+ +EA A+ A
Sbjct: 17 KLFVGQVPKNMTEAELLAMFKDFALVDEVNIIKDKTTRASRGCCFLICPSRQEADKAVNA 76
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL+VG L K S+ E+ ++FS YG I+D+
Sbjct: 77 CHNKKTLPGASSPLQVKYADGELERL---EHKLFVGMLPKNVSEAEVSDLFSKYGTIKDL 133
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ CAF+++ +E ALAA+ +NG M GS PLVV+ AD +K R
Sbjct: 134 QILRGSQQTSKSCAFLKYETKEQALAALEDINGKHKMEGSSVPLVVKWADTEKER 188
>gi|156083038|ref|XP_001609003.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis T2Bo]
gi|154796253|gb|EDO05435.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis]
Length = 420
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL+VA +P+T E +IR +FEE G+V +VV+ +DK T + FV+ +A A
Sbjct: 22 VEIKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADAA 81
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREH---------PVAPPDKLYVGCLSKQTSKKEIE 198
I+ LN + + ++ V++A GE E P KL+VG + K + I
Sbjct: 82 IKRLNNNCVVDTALGAVLVKYASGETERLGFTSLVGEPGVNDAKLFVGSIPKNAEEDLIR 141
Query: 199 EVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
E+F PYG +EDIFI++D+ +GCAFV+ +++E L AI L+G + G +P+ VR
Sbjct: 142 EIFGPYGTLEDIFIMKDQNGAGKGCAFVKMAYKEQGLYAIRSLDGMKQLEGCPRPMEVRF 201
Query: 259 ADPK 262
A+ K
Sbjct: 202 AESK 205
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +P T D+ F + G ++ + D+ TG+ +GY FV + E A AI+
Sbjct: 287 ANLFIFHIPNEWTHHDLVHTFSQFGKILSSRIASDRSTGRHKGYAFVSYDTPESAAQAIQ 346
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVA 178
LNG + G++ + ++ D E PVA
Sbjct: 347 HLNGFTVL-GKRLKVTIKKGD-ESTVPVA 373
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 172 EREHPVAPPD----KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFV 226
E +P AP KL+V + K + EI ++F +G ++D+ I+RD+ + + CAFV
Sbjct: 11 EVTYPCAPAPPVEIKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFV 70
Query: 227 QFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTG 267
+ A AAI LN + + ++V+ A + R G
Sbjct: 71 RMVSISQADAAIKRLNNNCVVDTALGAVLVKYASGETERLG 111
>gi|115442121|ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|20161317|dbj|BAB90241.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|215704529|dbj|BAG94162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE ++ +F+E V EV + KDK T +G CF+ EEA A+ A
Sbjct: 41 KLFVGQVPKHMTEAELLAMFQEVAIVDEVTVIKDKATKASRGCCFLICPSREEADKAVNA 100
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ + PG + ++V++ADGE E KL++G L K + E+ ++FS YG+I+D+
Sbjct: 101 YHNKHTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVTDTELTDLFSKYGNIKDL 157
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ GCAF+++ +E A+AAI LNG + GS PLVV+ AD +K R
Sbjct: 158 QILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKER 213
>gi|270013480|gb|EFA09928.1| hypothetical protein TcasGA2_TC012080 [Tribolium castaneum]
Length = 469
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V VPR+ E D+R +FEE+G V + + +DK TG +G CFV F + A A A
Sbjct: 69 KMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFTRKAALQAQDA 128
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ G I+++ AD E + KL+VG LSK+ + ++ +FS YG IE+
Sbjct: 129 LHNVKTLNGMHHPIQMKPADSENRNE----RKLFVGMLSKKLCENDVRTLFSGYGTIEEC 184
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++RD S+GCAFV F+ ++ AL+AI L+ + TM G PLVV+ AD +K +
Sbjct: 185 TVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQTMEGCSAPLVVKFADTQKEK 239
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 172 EREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSH 230
E+E P + K++VG + + + ++ +F YG + I ++RD+ S+GC FV F
Sbjct: 59 EQEQPDSDTIKMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFT 118
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIAD 260
R+ AL A L+ T+ G P+ ++ AD
Sbjct: 119 RKAALQAQDALHNVKTLNGMHHPIQMKPAD 148
>gi|326489549|dbj|BAK01755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 106/177 (59%), Gaps = 4/177 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ TE ++ +F++ V EV L KDK T +G CFV +EA A+
Sbjct: 31 VKLFVGQVPKHMTEAELAAMFKDVAVVDEVTLIKDKATKASRGCCFVICPSRDEADKAVN 90
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
A + + PG + ++V++ADGE E KL++G L K + E+ ++FS YG+I+D
Sbjct: 91 AYHNKHTLPGAASPLQVKYADGELER---LEHKLFIGMLPKNVADTELTDLFSKYGNIKD 147
Query: 210 IFIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R + S+ GCAF+++ +E A+AAI LNG + GS PLVV+ AD +K R
Sbjct: 148 LQILRGSQQTSKAGCAFIKYEMKEQAVAAIEDLNGKHKIEGSSVPLVVKWADTEKER 204
>gi|224068763|ref|XP_002302819.1| predicted protein [Populus trichocarpa]
gi|222844545|gb|EEE82092.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 105/175 (60%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE+++ +F+E V EV + KDK T +G CF+ +EA A+ A
Sbjct: 20 KLFVGQVPKHMTEDEVLAMFKEFALVDEVNIIKDKTTRASRGCCFLICPSRQEADKAVNA 79
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL+VG L K S+ E+ ++FS YG I+D+
Sbjct: 80 CHNKKTLPGASSPLQVKYADGELERL---EHKLFVGMLPKNVSEAELSDLFSKYGIIKDL 136
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+GCAF+++ +E A AA+ +NG M GS PLVV+ AD +K R
Sbjct: 137 QILRGSQQTSKGCAFLKYETKEQAHAALEDINGKHKMEGSSVPLVVKWADTEKER 191
>gi|60302694|ref|NP_001012539.1| CUGBP Elav-like family member 1 [Gallus gallus]
gi|60098733|emb|CAH65197.1| hypothetical protein RCJMB04_7f23 [Gallus gallus]
Length = 485
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 21/214 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + V KL++G +SK+ ++ +I +FSP+G IE
Sbjct: 77 NALHNMKILPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCNENDIRVMFSPFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQK 195
Query: 266 --------------TGELRGNYAFGTPSFGPNFL 285
+ GN A G + GP +L
Sbjct: 196 RIAQQLQQQMQQISAASVWGNLA-GLNTLGPQYL 228
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + +K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDR 108
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + E DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + I V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKD 191
>gi|355692855|gb|EHH27458.1| CUGBP Elav-like family member 6, partial [Macaca mulatta]
Length = 389
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HP P KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+
Sbjct: 22 HPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFL 81
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ PG I+V+ A E KL+VG L KQ +++
Sbjct: 82 TYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEED 138
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ +F P+GHIE+ ++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV
Sbjct: 139 VRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVV 198
Query: 257 RIADPKKPRT 266
++AD + R
Sbjct: 199 KLADTDRERA 208
>gi|395510718|ref|XP_003759619.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 453
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 113/203 (55%), Gaps = 12/203 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 30 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 86
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKL 183
D+ TG +G F+ + E A A AL+ PG I+V+ AD E KL
Sbjct: 87 DRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESR---GEDRKL 143
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L+G
Sbjct: 144 FVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHVEAQAAINALHG 203
Query: 244 TFTMRGSDQPLVVRIADPKKPRT 266
+ TM G+ LVV+ AD K RT
Sbjct: 204 SQTMPGASSSLVVKFADTDKERT 226
>gi|298710156|emb|CBJ31866.1| trinucleotide repeat containing 4, isoform CRA_d [Ectocarpus
siliculosus]
Length = 494
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +P+ EED+RP+FEE G + ++ + +DK +G +G F+ + A AI A
Sbjct: 45 KLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAA 104
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+G Q ++VR A+G+ E +KL+VG K ++ EI VF+PYG + +I
Sbjct: 105 LHGQRRLDRGQNPLQVRPAEGQAEQE----NKLFVGMAPKSANEDEIRAVFAPYGTLREI 160
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
++R++ ++GCAFV+++ R+ AL AI L+ +TM+G +PLVV+ AD K+
Sbjct: 161 HVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKR 213
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +P+ ++ D+ F G+V+ + D+ +G+ +G+ FV +++ A AI
Sbjct: 370 ANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIA 429
Query: 150 ALNGHYI 156
+NG I
Sbjct: 430 QMNGFQI 436
>gi|449274607|gb|EMC83685.1| CUG-BP- and ETR-3-like factor 1 [Columba livia]
Length = 515
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + V KL++G +SK+ ++ +I +FSP+G IE
Sbjct: 104 NALHNMKILPGMHHPIQMKPADSEKSNAV-EDRKLFIGMISKKCNENDIRVMFSPFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDK 219
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 162 ASIKVRFADGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK 218
AS + +G +HP P K++VG + + +K++ E+F YG + +I ++RD +
Sbjct: 21 ASTVSKKMNGTLDHPDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQ 80
Query: 219 ---QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
QS+GC FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 81 NPPQSKGCCFVTFYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKSNAVEDR 135
>gi|152013389|sp|Q5F3T7.2|CELF1_CHICK RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
Length = 489
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + V KL++G +SK+ ++ +I +FSP+G IE
Sbjct: 77 NALHNMKILPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCNENDIRVMFSPFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDK 192
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + +K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDR 108
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + E DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + I V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKD 191
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL+V +P++ EE+I+ LF N+ V L K+K T + QG FV EEA A
Sbjct: 1 MSTKLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRA 60
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHI 207
I L+ F G +++V++AD E+E + KL+VG L + +++I E+F P+G +
Sbjct: 61 IEQLHNSKKFQGVLNNLQVKYADSEQEKLAS---KLFVGMLPRSYEEEQIRELFEPHGVV 117
Query: 208 EDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
EDI I+R +S+GC F++F +RE AL+AI+ LNG + GS PLVV+ AD +K +
Sbjct: 118 EDICILRGPNSESKGCGFIKFDNRESALSAIATLNG-MKLDGSPNPLVVKFADTEKDK 174
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
+ L+V +P ++ D+ LF+++G V+ + DK TG +G+ FV + A AI
Sbjct: 403 SNLFVYNIPNYFSDNDLLGLFQQYGIVVSAKVYVDKNTGVSKGFGFVSYDNPASANLAIS 462
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHP 176
L+G + G++ + ++ G+ P
Sbjct: 463 NLHGQ-MMAGKKLKVSLKQTSGQGSQP 488
>gi|354473520|ref|XP_003498983.1| PREDICTED: CUGBP Elav-like family member 6-like [Cricetulus
griseus]
Length = 551
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 117 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 176
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 177 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 233
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 234 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMSGASSSLVVKLADTDRERA 289
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 185 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 243
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI+ L+G G +S+ V+ AD +RE +
Sbjct: 244 KGCAFVKFGSQGEAQAAIQGLHGSRTMSGASSSLVVKLADTDRERAL 290
>gi|50540190|ref|NP_001002562.1| CUGBP Elav-like family member 4 [Danio rerio]
gi|82235921|sp|Q6DGV1.1|CELF4_DANRE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|49904554|gb|AAH76238.1| Zgc:92761 [Danio rerio]
Length = 520
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D+RPLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 48 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTA 107
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ + ++ +F +G IE+
Sbjct: 108 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQCEDDVRRLFESFGSIEEC 164
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAIS L+G+ TM G+ LVV+ AD K RT
Sbjct: 165 TILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERT 220
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + E+D+R LFE G++ E + + G
Sbjct: 116 GMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGP-DGNS 174
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVK++ EA AI AL+G PG +S+ V+FAD ++E +
Sbjct: 175 KGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTI 221
>gi|42571323|ref|NP_973752.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189453|gb|AEE27574.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 438
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 6/182 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ TE + LF E V EV + K+K T +G CF+ E+A I
Sbjct: 12 VKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVIN 71
Query: 150 ALNGHYIFPGEQASIKVRFADGEREH------PVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
+ + PG + ++V++ADGE E P KL+VG L K S+ E++ +FS
Sbjct: 72 SFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETEVQSLFSE 131
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
YG I+D+ I+R L+ S+GC F+++ +E A+AA+ LNG M G++ PL+V+ AD +K
Sbjct: 132 YGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEK 191
Query: 264 PR 265
R
Sbjct: 192 ER 193
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +PR ++++ F+ G V+ + DK TG + + F+ + A NAI
Sbjct: 339 ANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAIN 398
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLS 189
+NG + G++ ++++ +G+++ + L+ G L+
Sbjct: 399 TMNGCQL-SGKKLKVQLKRDNGQQQQQQQSKNPLFNGLLN 437
>gi|302565316|ref|NP_001180884.1| CUGBP Elav-like family member 6 [Macaca mulatta]
Length = 481
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HP P KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+
Sbjct: 33 HPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFL 92
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ PG I+V+ A E KL+VG L KQ +++
Sbjct: 93 TYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEED 149
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ +F P+GHIE+ ++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV
Sbjct: 150 VRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVV 209
Query: 257 RIADPKKPRT 266
++AD + R
Sbjct: 210 KLADTDRERA 219
>gi|297848560|ref|XP_002892161.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
gi|297338003|gb|EFH68420.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
Length = 435
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 103/182 (56%), Gaps = 6/182 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ TE + LF E V EV + K+K T +G CF+ EEA I
Sbjct: 12 VKLFVGQVPKHMTEIQLLTLFSEFSIVDEVNIIKEKTTRVPRGCCFLTCPSREEADKVIN 71
Query: 150 ALNGHYIFPGEQASIKVRFADGEREH------PVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
+ PG + ++V++ADGERE P KL+VG L K S+ E++ +FS
Sbjct: 72 GFHNKKTLPGASSPLQVKYADGERERLDVLDCSCNPEHKLFVGMLPKNVSETEVQSLFSE 131
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
YG I+D+ I+R L+ S+GC F+++ +E A+ A+ LNG M G++ PL+V+ AD ++
Sbjct: 132 YGTIKDLQILRGSLQTSKGCLFLKYEFKEQAVTAMEALNGRHIMEGANVPLIVKWADTER 191
Query: 264 PR 265
R
Sbjct: 192 ER 193
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +PR ++++ F+ G V+ + DK TG + + F+ + A NAI
Sbjct: 339 ANLFIYNIPREFGDQELAAAFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAIN 398
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLS 189
+NG + G++ ++++ +G+++ P L+ G L+
Sbjct: 399 TMNGCQL-SGKKLKVQLKRDNGQQQQSNKP---LFNGLLN 434
>gi|207080190|ref|NP_001128833.1| CUGBP Elav-like family member 4 isoform 2 [Pongo abelii]
gi|55730138|emb|CAH91793.1| hypothetical protein [Pongo abelii]
Length = 456
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|9280669|gb|AAF86538.1|AC002560_31 F21B7.8 [Arabidopsis thaliana]
Length = 440
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 6/182 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ TE + LF E V EV + K+K T +G CF+ E+A I
Sbjct: 7 VKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVIN 66
Query: 150 ALNGHYIFPGEQASIKVRFADGEREH------PVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
+ + PG + ++V++ADGE E P KL+VG L K S+ E++ +FS
Sbjct: 67 SFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETEVQSLFSE 126
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
YG I+D+ I+R L+ S+GC F+++ +E A+AA+ LNG M G++ PL+V+ AD +K
Sbjct: 127 YGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEK 186
Query: 264 PR 265
R
Sbjct: 187 ER 188
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +PR ++++ F+ G V+ + DK TG + + F+ + A NAI
Sbjct: 341 ANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAIN 400
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLS 189
+NG + G++ ++++ +G+++ + L+ G L+
Sbjct: 401 TMNGCQL-SGKKLKVQLKRDNGQQQQQQQSKNPLFNGLLN 439
>gi|402874763|ref|XP_003901197.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Papio anubis]
gi|387542958|gb|AFJ72106.1| CUGBP Elav-like family member 6 isoform 1 [Macaca mulatta]
Length = 481
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HP P KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+
Sbjct: 33 HPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFL 92
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ PG I+V+ A E KL+VG L KQ +++
Sbjct: 93 TYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEED 149
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ +F P+GHIE+ ++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV
Sbjct: 150 VRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVV 209
Query: 257 RIADPKKPRT 266
++AD + R
Sbjct: 210 KLADTDRERA 219
>gi|148694026|gb|EDL25973.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 459
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMTGASSSLVVKLADTDRERAL 220
>gi|354469942|ref|XP_003497371.1| PREDICTED: CUGBP Elav-like family member 1-like [Cricetulus
griseus]
Length = 513
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|344247846|gb|EGW03950.1| CUG-BP- and ETR-3-like factor 1 [Cricetulus griseus]
Length = 514
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|395822449|ref|XP_003784530.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Otolemur
garnettii]
Length = 481
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 115 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 173
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI+ L+G G +S+ V+ AD +RE +
Sbjct: 174 KGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|8745539|gb|AAF78957.1|AF267535_1 CUG-binding protein LYLQ isoform [Mus musculus]
Length = 486
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|149022602|gb|EDL79496.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 513
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|157818811|ref|NP_001100297.1| CUGBP Elav-like family member 6 [Rattus norvegicus]
gi|149041860|gb|EDL95701.1| bruno-like 6, RNA binding protein (Drosophila) (predicted) [Rattus
norvegicus]
Length = 459
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERA 219
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMTGASSSLVVKLADTDRERAL 220
>gi|34328409|ref|NP_780444.2| CUGBP Elav-like family member 6 [Mus musculus]
gi|81912009|sp|Q7TN33.1|CELF6_MOUSE RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|30851561|gb|AAH52406.1| Bruno-like 6, RNA binding protein (Drosophila) [Mus musculus]
Length = 460
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 115 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 173
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI+ L+G G +S+ V+ AD +RE +
Sbjct: 174 KGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERAL 220
>gi|148694025|gb|EDL25972.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 465
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 52 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 111
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 112 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 168
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 169 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERA 224
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 120 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 178
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI+ L+G G +S+ V+ AD +RE +
Sbjct: 179 KGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERAL 225
>gi|148695568|gb|EDL27515.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
gi|148695569|gb|EDL27516.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
Length = 499
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 30 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 89
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 90 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 148
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 149 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 205
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 15 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 74
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 75 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 121
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 109 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 167
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 168 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 204
>gi|38570086|ref|NP_059064.2| CUGBP Elav-like family member 1 isoform 1 [Mus musculus]
gi|148695567|gb|EDL27514.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Mus
musculus]
Length = 513
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|417411512|gb|JAA52190.1| Putative rna-binding protein etr-3 rrm superfamily, partial
[Desmodus rotundus]
Length = 541
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 72 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 131
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 132 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 190
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 191 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 247
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 57 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 116
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 117 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 163
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 151 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 209
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 210 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 246
>gi|70794748|ref|NP_001020592.1| CUGBP Elav-like family member 1 [Rattus norvegicus]
gi|81918148|sp|Q4QQT3.1|CELF1_RAT RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|67678292|gb|AAH98012.1| CUG triplet repeat, RNA binding protein 1 [Rattus norvegicus]
Length = 487
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|12852385|dbj|BAB29392.1| unnamed protein product [Mus musculus]
gi|148695566|gb|EDL27513.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Mus
musculus]
Length = 487
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|38570084|ref|NP_941955.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349585220|ref|NP_001231820.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349732093|ref|NP_001231832.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|19857900|sp|P28659.2|CELF1_MOUSE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Brain protein F41; AltName:
Full=Bruno-like protein 2; AltName: Full=CUG triplet
repeat RNA-binding protein 1; Short=CUG-BP1; AltName:
Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=Deadenylation factor CUG-BP; AltName:
Full=Deadenylation factor EDEN-BP; AltName: Full=Embryo
deadenylation element-binding protein homolog;
Short=EDEN-BP homolog; AltName: Full=RNA-binding protein
BRUNOL-2
gi|12054715|emb|CAC20707.1| deadenylation factor EDEN-BP [Mus musculus]
Length = 486
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|149022603|gb|EDL79497.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 486
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|426379617|ref|XP_004056488.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Gorilla
gorilla gorilla]
Length = 481
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|355677605|gb|AER96037.1| CUG triplet repeat, RNA binding protein 1 [Mustela putorius furo]
Length = 540
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 72 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 131
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 132 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 190
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 191 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 247
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 57 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 116
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 117 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 163
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 151 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 209
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 210 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 246
>gi|397495530|ref|XP_003818605.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan paniscus]
Length = 481
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|344269052|ref|XP_003406369.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 3
[Loxodonta africana]
Length = 448
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 172 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 227
>gi|9246977|gb|AAF86232.1|AF248650_1 RNA-binding protein BRUNOL4 [Homo sapiens]
Length = 294
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 172 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 227
>gi|74150748|dbj|BAE25504.1| unnamed protein product [Mus musculus]
Length = 486
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|417400799|gb|JAA47323.1| Putative rna-binding protein cugbp1/bruno rrm superfamily [Desmodus
rotundus]
Length = 429
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|70780381|ref|NP_443072.3| CUGBP Elav-like family member 6 isoform 1 [Homo sapiens]
gi|74760888|sp|Q96J87.1|CELF6_HUMAN RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|15341327|gb|AAK95615.1|AF401233_1 BRUNO-like 6 RNA-binding protein [Homo sapiens]
gi|17046404|gb|AAL34513.1|AF425606_1 RNA-binding protein CELF6 [Homo sapiens]
gi|119598307|gb|EAW77901.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 481
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AIR
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIRG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|426379623|ref|XP_004056491.1| PREDICTED: CUGBP Elav-like family member 6 isoform 4 [Gorilla
gorilla gorilla]
Length = 463
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
>gi|21410087|gb|AAH30835.1| Bruno-like 6, RNA binding protein (Drosophila) [Homo sapiens]
Length = 481
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AIR
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIRG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|332236062|ref|XP_003267224.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Nomascus
leucogenys]
Length = 481
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|432090407|gb|ELK23833.1| CUGBP Elav-like family member 1 [Myotis davidii]
Length = 513
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKSNAVEDR 135
>gi|74140245|dbj|BAE33820.1| unnamed protein product [Mus musculus]
Length = 486
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I I+RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|431915767|gb|ELK16100.1| CUG-BP- and ETR-3-like factor 1 [Pteropus alecto]
Length = 513
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|426245410|ref|XP_004016504.1| PREDICTED: CUGBP Elav-like family member 1 [Ovis aries]
Length = 486
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|350586085|ref|XP_003127952.3| PREDICTED: CUGBP, Elav-like family member 4 [Sus scrofa]
Length = 448
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 172 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 227
>gi|338712050|ref|XP_003362651.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 3 [Equus
caballus]
gi|410973719|ref|XP_003993295.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Felis catus]
Length = 486
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|187761303|ref|NP_001020260.1| CUGBP Elav-like family member 4 isoform 4 [Homo sapiens]
gi|397520310|ref|XP_003830263.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Pan paniscus]
gi|426385816|ref|XP_004059397.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Gorilla
gorilla gorilla]
gi|28279033|gb|AAH45711.1| BRUNOL4 protein [Homo sapiens]
Length = 448
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 172 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 227
>gi|395822988|ref|XP_003784783.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Otolemur
garnettii]
Length = 448
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 172 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 227
>gi|345326922|ref|XP_003431097.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2
[Ornithorhynchus anatinus]
Length = 448
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 1/176 (0%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E + KL+VG L KQ S+ ++ +F P+G IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGRGALED-RKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 126
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++ A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 127 TILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERT 182
>gi|348558646|ref|XP_003465128.1| PREDICTED: CUGBP Elav-like family member 1-like [Cavia porcellus]
Length = 513
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|281340493|gb|EFB16077.1| hypothetical protein PANDA_010600 [Ailuropoda melanoleuca]
Length = 486
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|71164871|ref|NP_001020767.1| CUGBP Elav-like family member 1 isoform 3 [Homo sapiens]
gi|17374605|sp|Q92879.2|CELF1_HUMAN RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Bruno-like protein 2; AltName:
Full=CUG triplet repeat RNA-binding protein 1;
Short=CUG-BP1; AltName: Full=CUG-BP- and ETR-3-like
factor 1; AltName: Full=Deadenylation factor CUG-BP;
AltName: Full=Embryo deadenylation element-binding
protein homolog; Short=EDEN-BP homolog; AltName:
Full=RNA-binding protein BRUNOL-2
gi|8745535|gb|AAF78955.1|AF267533_1 CUG-binding protein LYLQ isoform [Homo sapiens]
gi|9246973|gb|AAF86230.1|AF248648_1 RNA-binding protein BRUNOL2 [Homo sapiens]
gi|12053580|emb|CAC20566.1| deadenylation factor CUG-BP [Homo sapiens]
gi|119588315|gb|EAW67909.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|119588318|gb|EAW67912.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|387539216|gb|AFJ70235.1| CUGBP Elav-like family member 1 isoform 3 [Macaca mulatta]
Length = 486
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|119588312|gb|EAW67906.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Homo
sapiens]
Length = 487
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|148664594|gb|EDK97010.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 485
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|168002776|ref|XP_001754089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694643|gb|EDQ80990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +P+ +E+ + +F E G V E+ + KDK T Q +G CF+ +T +EA AI
Sbjct: 17 KLFVGQLPKQMSEQQLVEVFSEAGTVHEINIIKDKLTKQSRGCCFLTYTTRQEADKAIEI 76
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ + ++V++ADGE E KL++G L K SK ++ VFSPYG I+++
Sbjct: 77 FHNKRTLQPVASPLQVKYADGEMERL---EHKLFIGMLPKGASKADVMAVFSPYGSIKEL 133
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+++ S+GCAF+++ +E A+AAI LNG M GS LVV+ AD +K R
Sbjct: 134 SVIKGSQPTSKGCAFLKYETKEQAIAAIEALNGVHRMEGSPSALVVKWADTEKER 188
>gi|226371663|ref|NP_001139766.1| CUGBP Elav-like family member 4 isoform C [Mus musculus]
gi|27753638|gb|AAO22167.1| bruno-like 4 protein [Mus musculus]
Length = 495
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 170
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 171 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 226
>gi|155372145|ref|NP_001094682.1| CUGBP Elav-like family member 1 [Bos taurus]
gi|154425935|gb|AAI51434.1| CUGBP1 protein [Bos taurus]
gi|296479665|tpg|DAA21780.1| TPA: CUG triplet repeat, RNA-binding protein 1 [Bos taurus]
Length = 486
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|383415257|gb|AFH30842.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939406|gb|AFI33308.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384944856|gb|AFI36033.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410222888|gb|JAA08663.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259328|gb|JAA17630.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259330|gb|JAA17631.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298512|gb|JAA27856.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298514|gb|JAA27857.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357300|gb|JAA44561.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357302|gb|JAA44562.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357304|gb|JAA44563.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 513
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|345326924|ref|XP_003431098.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3
[Ornithorhynchus anatinus]
Length = 447
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E H V KL+VG L KQ S+ ++ +F P+G IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSE-GHSVED-RKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 125
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++ A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 126 TILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERT 181
>gi|226371657|ref|NP_573458.2| CUGBP Elav-like family member 4 isoform D [Mus musculus]
Length = 484
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|119588314|gb|EAW67908.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Homo
sapiens]
gi|355566554|gb|EHH22933.1| hypothetical protein EGK_06290 [Macaca mulatta]
gi|355752163|gb|EHH56283.1| hypothetical protein EGM_05659 [Macaca fascicularis]
Length = 514
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 182 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|395822451|ref|XP_003784531.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Otolemur
garnettii]
Length = 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|187761301|ref|NP_001020259.1| CUGBP Elav-like family member 4 isoform 3 [Homo sapiens]
Length = 484
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|380807355|gb|AFE75553.1| CUGBP Elav-like family member 6 isoform 1, partial [Macaca mulatta]
Length = 226
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HP P KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+
Sbjct: 32 HPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFL 91
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ PG I+V+ A E KL+VG L KQ +++
Sbjct: 92 TYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEED 148
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ +F P+GHIE+ ++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV
Sbjct: 149 VRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVV 208
Query: 257 RIADPKKPRT 266
++AD + R
Sbjct: 209 KLADTDRERA 218
>gi|33872777|gb|AAH04167.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
gi|37515278|gb|AAH01946.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
Length = 484
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|402874765|ref|XP_003901198.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Papio anubis]
Length = 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HP P KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+
Sbjct: 33 HPGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFL 92
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ PG I+V+ A E KL+VG L KQ +++
Sbjct: 93 TYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEED 149
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ +F P+GHIE+ ++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV
Sbjct: 150 VRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVV 209
Query: 257 RIADPKKPRT 266
++AD + R
Sbjct: 210 KLADTDRERA 219
>gi|344269050|ref|XP_003406368.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2
[Loxodonta africana]
Length = 486
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|226371659|ref|NP_001139764.1| CUGBP Elav-like family member 4 isoform A [Mus musculus]
gi|29387384|gb|AAH48405.1| Brunol4 protein [Mus musculus]
Length = 504
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|291327533|ref|NP_001167545.1| CUGBP Elav-like family member 4 isoform F [Mus musculus]
gi|26341974|dbj|BAC34649.1| unnamed protein product [Mus musculus]
Length = 456
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD---KLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|348545314|ref|XP_003460125.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 1
[Oreochromis niloticus]
Length = 509
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 116/199 (58%), Gaps = 6/199 (3%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
+G+K + PD + I K++V +PR+ +EE +R LFE +G V E+ + +D+
Sbjct: 24 VGKKMNGSLDHPDQPDIDAI--KMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQN 81
Query: 129 --QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVG 186
Q +G CFV + + A A AL+ I PG I+++ AD E+ + KL++G
Sbjct: 82 PPQSKGCCFVTYYSRKSALEAQNALHNMKILPGMHHPIQMKPADSEKNN--VEDRKLFIG 139
Query: 187 CLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFT 246
+SK+ ++ +I +FSPYG IE+ I+R SRGCAFV F+ R+MA +AI ++ + T
Sbjct: 140 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQT 199
Query: 247 MRGSDQPLVVRIADPKKPR 265
M G P+VV+ AD +K +
Sbjct: 200 MEGCSSPIVVKFADTQKDK 218
>gi|148664598|gb|EDK97014.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_e [Mus
musculus]
Length = 501
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 61 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 120
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 121 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 176
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 177 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 232
>gi|197097518|ref|NP_001127577.1| CUGBP Elav-like family member 4 isoform 1 [Pongo abelii]
gi|55732010|emb|CAH92712.1| hypothetical protein [Pongo abelii]
Length = 457
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ ++ E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYSERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLLVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|148224750|ref|NP_001079970.1| CUGBP Elav-like family member 1-B [Xenopus laevis]
gi|47123025|gb|AAH70706.1| Cugbp1-b protein [Xenopus laevis]
Length = 529
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 128/248 (51%), Gaps = 34/248 (13%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVK 137
PDH + I K++V VPR+ +E+++R LFE++G V E+ + +D+ Q +G CF+
Sbjct: 35 PDHPDSDSI--KMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFIT 92
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER-----------EHPVAPPD-KLYV 185
F + A A AL+ + PG I+++ AD E+ EHP + D KL++
Sbjct: 93 FYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNGGLNTVLFPEHPASVEDRKLFI 152
Query: 186 GCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
G +SK+ ++ +I +FS +G IE+ I+R SRGCAF+ F+ R MA AI ++
Sbjct: 153 GMVSKKCNENDIRTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQ 212
Query: 246 TMRGSDQPLVVRIADPKKPR-----------------TGELRGNYAFGTPSFGPNFLEPV 288
TM G P+VV+ AD +K + + GN A G S P +L +
Sbjct: 213 TMEGCSSPIVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLA-GLGSLAPQYLALL 271
Query: 289 RPPPNLGN 296
+ + GN
Sbjct: 272 QQTTSSGN 279
>gi|397495532|ref|XP_003818606.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan paniscus]
Length = 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|395501660|ref|XP_003755209.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 399
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 23 KLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSA 82
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S++++ +F P+G IE+
Sbjct: 83 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEEDVRRLFEPFGQIEEC 139
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV+F A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 140 TILRGPDGTSKGCAFVKFGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERT 195
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +EED+R LFE G + E + + G
Sbjct: 91 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIEECTILRGP-DGTS 149
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 150 KGCAFVKFGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTL 196
>gi|387542960|gb|AFJ72107.1| CUGBP Elav-like family member 4 isoform 4 [Macaca mulatta]
Length = 447
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAIKAQTA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMARPIQVKPADSESRGD----RKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 170
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 171 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 226
>gi|187761299|ref|NP_001020258.1| CUGBP Elav-like family member 4 isoform 2 [Homo sapiens]
Length = 485
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|152013394|sp|Q7TSY6.2|CELF4_MOUSE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
Length = 486
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|75075903|sp|Q4R535.1|CELF4_MACFA RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|67970896|dbj|BAE01790.1| unnamed protein product [Macaca fascicularis]
Length = 474
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 170
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 171 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 226
>gi|148664596|gb|EDK97012.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_c [Mus
musculus]
Length = 510
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 61 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 120
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 121 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 180
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 181 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 240
Query: 265 RT 266
RT
Sbjct: 241 RT 242
>gi|332236064|ref|XP_003267225.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Nomascus
leucogenys]
Length = 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|56403901|emb|CAI29735.1| hypothetical protein [Pongo abelii]
Length = 486
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAIS L+G+ TM G+ LV + AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVAKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|426379619|ref|XP_004056489.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Gorilla
gorilla gorilla]
Length = 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|321460482|gb|EFX71524.1| hypothetical protein DAPPUDRAFT_227924 [Daphnia pulex]
Length = 403
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 111/193 (57%), Gaps = 11/193 (5%)
Query: 73 RGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQG 132
R + P PD I K++V +PR+ E D+R +FE++G V +V + +DK +GQ +G
Sbjct: 4 RVADQPDPDAI-------KMFVGQIPRSMDENDLRKMFEDYGQVHQVNVLRDKISGQSKG 56
Query: 133 YCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQT 192
CFV F ++A A ++ G I+++ AD E + KL+VG LSK+
Sbjct: 57 CCFVTFYKRKDALQAQNDMHNIKTLSGMHHPIQMKPADSENRNE----RKLFVGMLSKKI 112
Query: 193 SKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQ 252
S+ ++ +FS YG IE+ ++RD SRGCAFV F+ R+ A+ AI ++ + TM G
Sbjct: 113 SENDVRIMFSAYGSIEECTVLRDNNNISRGCAFVTFTSRQSAVTAIKTVHHSQTMEGCSS 172
Query: 253 PLVVRIADPKKPR 265
P+VV+ AD +K +
Sbjct: 173 PMVVKFADTQKEK 185
>gi|148664595|gb|EDK97011.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 463
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 61 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 120
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 121 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 180
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 181 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 240
Query: 264 PRT 266
RT
Sbjct: 241 ERT 243
>gi|395822986|ref|XP_003784782.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Otolemur
garnettii]
Length = 486
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|301769063|ref|XP_002919950.1| PREDICTED: CUGBP Elav-like family member 4-like [Ailuropoda
melanoleuca]
Length = 463
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD---KLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|22329313|ref|NP_171845.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449591|dbj|BAC41921.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|28950997|gb|AAO63422.1| At1g03457 [Arabidopsis thaliana]
gi|332189452|gb|AEE27573.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 429
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ TE + LF E V EV + K+K T +G CF+ E+A I
Sbjct: 12 VKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDADKVIN 71
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
+ + PG + ++V++ADGE E KL+VG L K S+ E++ +FS YG I+D
Sbjct: 72 SFHNKKTLPGASSPLQVKYADGELERL---EHKLFVGMLPKNVSETEVQSLFSEYGTIKD 128
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R L+ S+GC F+++ +E A+AA+ LNG M G++ PL+V+ AD +K R
Sbjct: 129 LQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKER 184
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +PR ++++ F+ G V+ + DK TG + + F+ + A NAI
Sbjct: 330 ANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAIN 389
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLS 189
+NG + G++ ++++ +G+++ + L+ G L+
Sbjct: 390 TMNGCQL-SGKKLKVQLKRDNGQQQQQQQSKNPLFNGLLN 428
>gi|70939105|ref|XP_740139.1| RNA binding protein [Plasmodium chabaudi chabaudi]
gi|56517645|emb|CAH76403.1| RNA binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 248
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 15/176 (8%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HPAP + KL++ VP+ EE +RP+FEE G V EVV+ +DK T + FV
Sbjct: 78 HPAPP------VSIKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFV 131
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCL 188
K EA NAIR+LN + S++V++A GE P + KL++G L
Sbjct: 132 KMASISEADNAIRSLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSL 191
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNG 243
K +++ I+++FS YG +E++FI++D +GC+FV+F+++E AL AIS LNG
Sbjct: 192 PKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNG 247
>gi|289547741|ref|NP_001166155.1| CUGBP Elav-like family member 6 isoform 2 [Homo sapiens]
gi|194381648|dbj|BAG58778.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AIR
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIRG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|26339326|dbj|BAC33334.1| unnamed protein product [Mus musculus]
Length = 484
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S+ ++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 234
Query: 265 RT 266
RT
Sbjct: 235 RT 236
>gi|332849799|ref|XP_512100.3| PREDICTED: CUGBP, Elav-like family member 4 [Pan troglodytes]
gi|194379036|dbj|BAG58069.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 170
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 171 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 226
>gi|62089134|dbj|BAD93011.1| bruno-like 4, RNA binding protein variant [Homo sapiens]
Length = 510
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 80 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 139
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 140 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 199
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 200 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 259
Query: 264 PRT 266
RT
Sbjct: 260 ERT 262
>gi|226371661|ref|NP_001139765.1| CUGBP Elav-like family member 4 isoform B [Mus musculus]
gi|30931371|gb|AAH52744.1| Bruno-like 4, RNA binding protein (Drosophila) [Mus musculus]
Length = 485
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|13123778|ref|NP_064565.1| CUGBP Elav-like family member 4 isoform 1 [Homo sapiens]
gi|397520308|ref|XP_003830262.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Pan paniscus]
gi|403265036|ref|XP_003924762.1| PREDICTED: CUGBP Elav-like family member 4 [Saimiri boliviensis
boliviensis]
gi|426385818|ref|XP_004059398.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Gorilla
gorilla gorilla]
gi|74761348|sp|Q9BZC1.1|CELF4_HUMAN RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|152013395|sp|Q5NVC8.2|CELF4_PONAB RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|12746394|gb|AAK07475.1|AF329265_1 CUG-BP and ETR-3 like factor 4 [Homo sapiens]
gi|119621802|gb|EAX01397.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Homo
sapiens]
Length = 486
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|326505362|dbj|BAK03068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 601
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 12/197 (6%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD I K++ +PR E ++R +FE+ G V ++ + +DK+TG+ +G CFV
Sbjct: 32 PDPDAI-------KMFCGQIPRNMHEAELRDMFEQFGPVFQLNVLRDKQTGESKGCCFVT 84
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F + A +A AL+ G I+++ AD E + KL+VG +SK + I
Sbjct: 85 FYSRKSALDAQNALHNLRTLNGSHHPIQMKPADTENRNE----RKLFVGMVSKNLDEPNI 140
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+F YG IED ++RD +SRGCAFV F R+ AL AI ++ + TM G PLVV+
Sbjct: 141 RSLFQSYGTIEDCTVLRDANGKSRGCAFVTFQKRQCALNAIKSMHQSQTMEGCSSPLVVK 200
Query: 258 IAD-PKKPRTGELRGNY 273
AD PK T +++ Y
Sbjct: 201 FADTPKDKETKKIQQQY 217
>gi|149638168|ref|XP_001508614.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1
[Ornithorhynchus anatinus]
Length = 446
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F P+G IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++ A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 125 TILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERT 180
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 76 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGP-DGAS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVK+ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 135 KGCAFVKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTL 181
>gi|351711625|gb|EHB14544.1| CUG-BP- and ETR-3-like factor 4 [Heterocephalus glaber]
Length = 702
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 220 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 279
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 280 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 339
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 340 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 399
Query: 264 PRT 266
RT
Sbjct: 400 ERT 402
>gi|149944693|ref|NP_001092538.1| CUGBP Elav-like family member 4 [Bos taurus]
gi|148878073|gb|AAI46143.1| BRUNOL4 protein [Bos taurus]
gi|296473867|tpg|DAA15982.1| TPA: CUG-BP- and ETR-3-like factor 4 [Bos taurus]
Length = 475
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 170
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 171 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 226
>gi|296213628|ref|XP_002753353.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Callithrix
jacchus]
Length = 481
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQDEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|432852722|ref|XP_004067352.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Oryzias latipes]
Length = 493
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 102
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F +G IE+
Sbjct: 103 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFETFGQIEEC 159
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+FS A AAI+ L+G TM G+ LVV+ AD K RT
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERT 215
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 111 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGP-DGAS 169
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF+ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 170 KGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTL 216
>gi|432852724|ref|XP_004067353.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 3
[Oryzias latipes]
Length = 454
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 102
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F +G IE+
Sbjct: 103 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFETFGQIEEC 159
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+FS A AAI+ L+G TM G+ LVV+ AD K RT
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERT 215
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 111 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGP-DGAS 169
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF+ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 170 KGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTL 216
>gi|432852728|ref|XP_004067355.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 5
[Oryzias latipes]
Length = 443
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 102
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F +G IE+
Sbjct: 103 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFETFGQIEEC 159
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+FS A AAI+ L+G TM G+ LVV+ AD K RT
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERT 215
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 111 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGP-DGAS 169
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF+ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 170 KGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTL 216
>gi|432852720|ref|XP_004067351.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Oryzias latipes]
Length = 481
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 102
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F +G IE+
Sbjct: 103 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFETFGQIEEC 159
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+FS A AAI+ L+G TM G+ LVV+ AD K RT
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERT 215
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 111 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGP-DGAS 169
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF+ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 170 KGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTL 216
>gi|148664597|gb|EDK97013.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Mus
musculus]
Length = 491
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 61 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 120
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 121 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 180
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 181 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 240
Query: 264 PRT 266
RT
Sbjct: 241 ERT 243
>gi|348500286|ref|XP_003437704.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Oreochromis
niloticus]
Length = 481
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 102
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F +G IE+
Sbjct: 103 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFETFGQIEEC 159
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+FS A AAI+ L+G TM G+ LVV+ AD K RT
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERT 215
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 111 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGP-DGAS 169
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF+ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 170 KGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTL 216
>gi|432852726|ref|XP_004067354.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 4
[Oryzias latipes]
Length = 494
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 102
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F +G IE+
Sbjct: 103 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFETFGQIEEC 159
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+FS A AAI+ L+G TM G+ LVV+ AD K RT
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERT 215
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 111 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGP-DGAS 169
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF+ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 170 KGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTL 216
>gi|82237708|sp|Q6PF35.1|CEL1B_XENLA RecName: Full=CUGBP Elav-like family member 1-B; Short=CELF-1B;
AltName: Full=Bruno-like protein 2-B; AltName: Full=CUG
triplet repeat RNA-binding protein 1-B; Short=CUG-BP1-B;
AltName: Full=CUG-BP- and ETR-3-like factor 1-B;
AltName: Full=Embryo deadenylation element-binding
protein B; Short=EDEN-BP-B; AltName: Full=RNA-binding
protein BRUNOL-2-B; AltName: Full=p53/p55
gi|34784678|gb|AAH57743.1| Cugbp1-b protein [Xenopus laevis]
Length = 489
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 23/236 (9%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVK 137
PDH + I K++V VPR+ +E+++R LFE++G V E+ + +D+ Q +G CF+
Sbjct: 8 PDHPDSDSI--KMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFIT 65
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F + A A AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I
Sbjct: 66 FYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMVSKKCNENDI 124
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+FS +G IE+ I+R SRGCAF+ F+ R MA AI ++ TM G P+VV+
Sbjct: 125 RTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVK 184
Query: 258 IADPKKPR-----------------TGELRGNYAFGTPSFGPNFLEPVRPPPNLGN 296
AD +K + + GN A G S P +L ++ + GN
Sbjct: 185 FADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLA-GLGSLAPQYLALLQQTTSSGN 239
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ V + E DIR LF + G + E + + G +G F+
Sbjct: 96 PADSEKNNAVEDRKLFIGMVSKKCNENDIRTLFSQFGQIEESRILRGP-DGMSRGCAFIT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + I V+FAD +++
Sbjct: 155 FTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKD 191
>gi|357126722|ref|XP_003565036.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Brachypodium distachyon]
Length = 450
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE ++ +F E V EV + KDK T +G CF+ +EA AI A
Sbjct: 30 KLFVGQVPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINA 89
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ + PG + ++V++ADGE E KL++G L K E+ ++FS YG+I+D+
Sbjct: 90 YHNKHTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVEDTELTDLFSEYGNIKDL 146
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ GCAF+++ +E A+AAI LNG + GS PLVV+ AD +K R
Sbjct: 147 QILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKER 202
>gi|449462310|ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
Length = 438
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE + +F+E V EV + +DK T +G CFV +EA A+ A
Sbjct: 23 KLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNA 82
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL++G L K S+ E+ +FS YG I+D+
Sbjct: 83 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDL 139
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+GCAF+++ ++ A+AA+ +NG M GS PLVV+ AD +K R
Sbjct: 140 QILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKER 194
>gi|391337388|ref|XP_003743051.1| PREDICTED: CUGBP Elav-like family member 2-like [Metaseiulus
occidentalis]
Length = 512
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 4/170 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +PR E ++R LFEE G V + + +DK TG +G CFV F + A +A
Sbjct: 59 KMFVGQIPRNWDENELRNLFEEFGKVHSINVLRDKATGNSRGCCFVTFYTRKSALDAQND 118
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+++ AD E + KL++G LSK+ + ++ +FS +G IE+
Sbjct: 119 LHNIKTLPGMHHPIQMKPADSENRNE----RKLFIGMLSKECDESDVRLMFSSFGTIEEC 174
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
++RD QS+GCAFV +S R+ A+ AI +N + TM+G PLVV+ AD
Sbjct: 175 TVLRDGQGQSKGCAFVTYSTRQCAINAIKSMNHSQTMKGCSNPLVVKFAD 224
>gi|344269048|ref|XP_003406367.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1
[Loxodonta africana]
Length = 447
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 125 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +E+D+R LFE GN+ E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVK++ EA AI AL+G PG +S+ V+FAD ++E
Sbjct: 135 KGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKER 179
>gi|390468527|ref|XP_003733960.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Callithrix
jacchus]
Length = 454
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQDEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI GL+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 135 KLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|410912254|ref|XP_003969605.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Takifugu
rubripes]
Length = 481
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 102
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F +G IE+
Sbjct: 103 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFESFGQIEEC 159
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+FS A AAI+ L+G TM G+ LVV+ AD K RT
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHGEAQAAINSLHGGQTMPGASSSLVVKFADTDKERT 215
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + +E+D+R LFE G + E + + G
Sbjct: 111 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFESFGQIEECTVLRGP-DGAS 169
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF+ EA AI +L+G PG +S+ V+FAD ++E +
Sbjct: 170 KGCAFVKFSSHGEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTL 216
>gi|387542962|gb|AFJ72108.1| CUGBP Elav-like family member 4 isoform 1 [Macaca mulatta]
Length = 486
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 7/183 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAIKAQTA 114
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
L+ PG I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHEQKTLPGMARPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 174
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 175 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 234
Query: 264 PRT 266
RT
Sbjct: 235 ERT 237
>gi|326920382|ref|XP_003206453.1| PREDICTED: CUGBP Elav-like family member 1-like [Meleagris
gallopavo]
Length = 487
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + KL++G +SK+ ++ +I +FSP+G IE
Sbjct: 77 NALHNMKILPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCNENDIRVMFSPFGQIE 134
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 135 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDK 191
>gi|145306680|gb|ABP57104.1| CUG binding protein 1 [Gallus gallus]
Length = 487
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + KL++G +SK+ ++ +I +FSP+G IE
Sbjct: 77 NALHNMKILPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCNENDIRVMFSPFGQIE 134
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 135 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDK 191
>gi|387015318|gb|AFJ49778.1| CUGBP Elav-like family member 1-like [Crotalus adamanteus]
Length = 511
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 21/214 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRSWSEKDLRDLFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKILPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCNENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR--- 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQK 222
Query: 266 --------------TGELRGNYAFGTPSFGPNFL 285
+ GN A G + GP +L
Sbjct: 223 RIAQQLQQQMQQISAASVWGNLA-GLNTLGPQYL 255
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ ++F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRSWSEKDLRDLFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDR 135
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + E DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + I V+FAD +++
Sbjct: 182 FTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKD 218
>gi|426233875|ref|XP_004010933.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Ovis aries]
Length = 451
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 19 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 78
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 79 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 135
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LVV++AD + R
Sbjct: 136 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 191
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 87 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 145
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI++L+G G +S+ V+ AD +RE +
Sbjct: 146 KGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERAL 192
>gi|151936115|gb|ABS18834.1| ELAV-type RNA binding protein variant C [Caenorhabditis elegans]
Length = 378
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 9/227 (3%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P+P + I K++V +PR E D R LFE++G+V + +DK T +G CFV
Sbjct: 45 PSPSEPDTDAI--KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F ++A A AL+ + G ++++ AD E + KL++G LSK+ +++ +
Sbjct: 103 FYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNE----RKLFIGQLSKKHNEENL 158
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
E+F+ +GHIED ++RD+ +SRGCAFV F++R A+ A ++ + TM G PLVV+
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVK 218
Query: 258 IADPKKP---RTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQ 301
AD +K +T + G+P G L P L GGQ
Sbjct: 219 FADTQKDKDVKTKSMITGSGAGSPKGGAASLLQNLNPALLQQLGGGQ 265
>gi|334314036|ref|XP_003339980.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Monodelphis
domestica]
Length = 464
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 54 KLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSA 113
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S++++ +F P+G IE+
Sbjct: 114 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEEDVRRLFEPFGQIEEC 170
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV+F + A AAI+ L+G+ M G+ LVV+ AD K RT
Sbjct: 171 TILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERT 226
>gi|126272943|ref|XP_001371226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Monodelphis
domestica]
Length = 491
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 54 KLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSA 113
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S++++ +F P+G IE+
Sbjct: 114 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEEDVRRLFEPFGQIEEC 170
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV+F + A AAI+ L+G+ M G+ LVV+ AD K RT
Sbjct: 171 TILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERT 226
>gi|395543757|ref|XP_003773780.1| PREDICTED: CUGBP Elav-like family member 1 [Sarcophilus harrisii]
Length = 513
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKILPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCNENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDK 219
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDR 135
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + E DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + I V+FAD +++
Sbjct: 182 FTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKD 218
>gi|223996717|ref|XP_002288032.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
gi|220977148|gb|EED95475.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
Length = 356
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P KL+V VP+T EED+ LFE +G ++++ + +D+RTG +G FV + E+A +
Sbjct: 1 PLKLFVGQVPKTLAEEDLALLFEPYGRILDMTVIRDRRTGTHRGCAFVTYESGEDAMRVV 60
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPD------KLYVGCLSKQTSKKEIEEVFS 202
++G Y F G +VR A GE E D KL+VG L ++ + + E+F+
Sbjct: 61 NEMHGKYRFEGAMWPAQVRPAQGEIEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFT 120
Query: 203 PYGHIEDIFIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
YG I I+I++ +++ GCAFV+F R+MA AAI L+G + G D+P+ V+ AD
Sbjct: 121 SYGDITGIYIIKKRNNEAKNGCAFVKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFADQ 180
Query: 262 KK 263
K
Sbjct: 181 NK 182
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +P T+ D+ F G+VI + D+ TG+ +G+ FV + A AI
Sbjct: 279 ANLFIYHLPIDLTDADLATAFNPFGHVISAKVYVDRYTGESKGFGFVSYDSVMAAELAIE 338
Query: 150 ALNGHYI 156
+NG I
Sbjct: 339 QMNGFQI 345
>gi|242087741|ref|XP_002439703.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
gi|241944988|gb|EES18133.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
Length = 455
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ +E ++ LF V EV + +D+ T +G CFV EEA A+ A
Sbjct: 36 KLFVGQVPKQMSEAELAALFRGVALVDEVTVIRDRATRVSRGCCFVICPSREEADKAVTA 95
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL+VG L K + E+ ++FS YG+I+D+
Sbjct: 96 YHNKRTLPGASSPLQVKYADGELER---LEHKLFVGMLPKNVTDAEMTDLFSKYGNIKDL 152
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ GCAF+++ +E A+AAI LNGT + GS PLVV+ AD +K R
Sbjct: 153 QILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKER 208
>gi|410931355|ref|XP_003979061.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 378
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 116/199 (58%), Gaps = 6/199 (3%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
+G+K + PD + I K++V +PR+ +EE +R LFE +G V E+ + +D+
Sbjct: 24 VGKKMNGSLDHPDQPDVDAI--KMFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQN 81
Query: 129 --QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVG 186
Q +G CFV + + A A AL+ I PG I+++ AD E+ + KL++G
Sbjct: 82 PPQSKGCCFVTYYTRKSALEAQNALHNMKILPGMHHPIQMKPADSEKNN--VEDRKLFIG 139
Query: 187 CLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFT 246
+SK+ ++ +I +FSPYG IE+ I+R SRGCAFV F+ R+MA +AI ++ + T
Sbjct: 140 MISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQT 199
Query: 247 MRGSDQPLVVRIADPKKPR 265
M G P+VV+ AD +K +
Sbjct: 200 MEGCSSPIVVKFADTQKDK 218
>gi|42476252|ref|NP_571569.2| CUGBP Elav-like family member 3 [Danio rerio]
gi|152013393|sp|Q9IBD1.2|CELF3_DANRE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|38173873|gb|AAH60923.1| Trinucleotide repeat containing 4 [Danio rerio]
Length = 452
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S ++ ++F P+G IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGRGD----RKLFVGMLGKQLSDADVRKMFEPFGSIEEC 123
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV++ A AAIS L+G+ T+ G+ LVV+ AD +K R
Sbjct: 124 TVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKER 178
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + ++ D+R +FE G++ E + + G +G FVK+ EA AI A
Sbjct: 95 KLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGP-DGASKGCAFVKYQSNAEAQAAISA 153
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD E+E +
Sbjct: 154 LHGSRTLPGASSSLVVKFADTEKERGI 180
>gi|71980775|ref|NP_492958.3| Protein UNC-75 [Caenorhabditis elegans]
gi|33469616|gb|AAQ19851.1| putative RNA-binding protein [Caenorhabditis elegans]
gi|38422759|emb|CAB03896.4| Protein UNC-75 [Caenorhabditis elegans]
Length = 514
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 13/197 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
GF PD I KL+V +PR E+D+R LFE+ G + E + KDK TG +G
Sbjct: 20 GFPVKDPDAI-------KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGC 72
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDK-----LYVGCL 188
F+ + + A L+ PG +++V+ AD + P +P DK L++G L
Sbjct: 73 AFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTDSR-PASPKDKMDDKKLFIGML 131
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
SKQ S+ E+ +F+ +G ++++ ++R S+GCAFV++ H A AIS L+G+ TM
Sbjct: 132 SKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMP 191
Query: 249 GSDQPLVVRIADPKKPR 265
G+ LVV+ AD +K R
Sbjct: 192 GASSSLVVKYADTEKER 208
>gi|7670536|dbj|BAA95118.1| Etr-1 [Danio rerio]
Length = 452
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S ++ ++F P+G IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGRGD----RKLFVGMLGKQLSDADVRKMFEPFGSIEEC 123
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV++ A AAIS L+G+ T+ G+ LVV+ AD +K R
Sbjct: 124 TVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKER 178
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + ++ D+R +FE G++ E + + G +G FVK+ EA AI A
Sbjct: 95 KLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGP-DGASKGCAFVKYQSNAEAQAAISA 153
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD E+E +
Sbjct: 154 LHGSRTLPGASSSLVVKFADTEKERGI 180
>gi|301772548|ref|XP_002921692.1| PREDICTED: CUGBP Elav-like family member 1-like [Ailuropoda
melanoleuca]
Length = 512
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 161
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 162 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 218
>gi|338712047|ref|XP_003362650.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 2 [Equus
caballus]
gi|345783916|ref|XP_003432496.1| PREDICTED: CUGBP, Elav-like family member 1 [Canis lupus
familiaris]
gi|410973717|ref|XP_003993294.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Felis catus]
Length = 512
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 161
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 162 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 218
>gi|289547698|ref|NP_001166144.1| CUGBP Elav-like family member 5 isoform 2 [Homo sapiens]
Length = 409
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 19/266 (7%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + D KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ +
Sbjct: 36 PDGMKDLDA-IKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYC 94
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEE 199
+ A A AL+ PG I+V+ AD E KL+VG L+KQ S++++
Sbjct: 95 ARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLR 152
Query: 200 VFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ A
Sbjct: 153 LFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFA 212
Query: 260 DPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSY 308
D K RT ++ G TPS F ++ + +++G + P V++
Sbjct: 213 DTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAF 272
Query: 309 RPQHIFNNSHPQVFSNWGNQEAATPI 334
P HI Q+ + N ATPI
Sbjct: 273 SPCHI-----QQIGAVSLNGLPATPI 293
>gi|344281041|ref|XP_003412289.1| PREDICTED: CUGBP Elav-like family member 1-like [Loxodonta
africana]
Length = 512
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 161
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 162 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 218
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 134/252 (53%), Gaps = 24/252 (9%)
Query: 66 MPFIGRKRGFNHPAPDHINDSGIPA-KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD 124
+P +G + N + DH + I + K++V +PRT +E+ +R LFE +G V E+ + +D
Sbjct: 30 VPALGGSKKMNG-SLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRD 88
Query: 125 KRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDK 182
+ Q +G CFV + + A A AL+ I PG I+++ AD E+ + V K
Sbjct: 89 RSQNPPQSKGCCFVTYYTRKSALEAQNALHNMKILPGMHHPIQMKPADSEKNNAV-EDRK 147
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLN 242
L+VG +SK+ ++ +I +FSPYG IE+ I+R SR CAFV F+ R+MA +AI ++
Sbjct: 148 LFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDGLSR-CAFVTFTARQMAQSAIKSMH 206
Query: 243 GTFTMRGSDQPLVVRIADPKKPR-----------------TGELRGNYAFGTPSFGPNFL 285
+ TM G P+VV+ AD +K + + GN G S GP +L
Sbjct: 207 QSQTMEGCSSPIVVKFADTQKDKEQKRIAQQLQQQMQQLNAASMWGNLT-GLNSLGPQYL 265
Query: 286 EPVRPPPNLGNS 297
++ + GN+
Sbjct: 266 ALLQQSASSGNA 277
>gi|289547568|ref|NP_001166111.1| CUGBP Elav-like family member 1 isoform 5 [Homo sapiens]
Length = 485
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 134
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 135 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 191
>gi|395831373|ref|XP_003788777.1| PREDICTED: CUGBP Elav-like family member 5 [Otolemur garnettii]
Length = 485
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 19/266 (7%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + D KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ +
Sbjct: 36 PDGMKDLDA-IKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYC 94
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEE 199
+ A A AL+ PG I+V+ AD E KL+VG L+KQ S++++
Sbjct: 95 ARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLR 152
Query: 200 VFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ A
Sbjct: 153 LFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFA 212
Query: 260 DPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSY 308
D K RT ++ G TPS F ++ + +++G + P V++
Sbjct: 213 DTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAF 272
Query: 309 RPQHIFNNSHPQVFSNWGNQEAATPI 334
P HI Q+ + N ATPI
Sbjct: 273 SPCHI-----QQIGAVSLNGLPATPI 293
>gi|440903464|gb|ELR54119.1| CUGBP Elav-like family member 1 [Bos grunniens mutus]
Length = 512
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 161
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 162 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 218
>gi|334314038|ref|XP_003339981.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Monodelphis
domestica]
Length = 470
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 54 KLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSALKAQSA 113
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S++++ +F P+G IE+
Sbjct: 114 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEEDVRRLFEPFGQIEEC 170
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV+F + A AAI+ L+G+ M G+ LVV+ AD K RT
Sbjct: 171 TILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERT 226
>gi|149632715|ref|XP_001509363.1| PREDICTED: CUGBP Elav-like family member 1 [Ornithorhynchus
anatinus]
Length = 513
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCNENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILRGPDGLSRGCAFVTFTTRSMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDK 219
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + E DIR +F G + E + + G +G FV
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 181
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + I V+FAD +++
Sbjct: 182 FTTRSMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKD 218
>gi|324501916|gb|ADY40847.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 501
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 5/179 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+R LFE G + E + KDK TG +G F+ + + A A
Sbjct: 34 KLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRCQAA 93
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPD----KLYVGCLSKQTSKKEIEEVFSPYGH 206
L+ PG +++V+ AD E P +P + KL+VG LSKQ ++ ++ +F+P+G
Sbjct: 94 LHDQKTLPGMNRAMQVKPADSE-SRPNSPKNAEERKLFVGMLSKQQNEDDVRALFAPFGA 152
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+++ ++R S+GCAFV+F+ A AIS L+G+ TM G+ LVV+ AD +K R
Sbjct: 153 IDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQTMPGASSSLVVKFADTEKER 211
>gi|289547566|ref|NP_001166110.1| CUGBP Elav-like family member 1 isoform 4 [Homo sapiens]
gi|109106411|ref|XP_001106041.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 4 [Macaca
mulatta]
gi|296218064|ref|XP_002755281.1| PREDICTED: CUGBP Elav-like family member 1 [Callithrix jacchus]
gi|332259914|ref|XP_003279029.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|397488336|ref|XP_003815223.1| PREDICTED: CUGBP Elav-like family member 1 [Pan paniscus]
gi|402893566|ref|XP_003909963.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Papio anubis]
gi|168275618|dbj|BAG10529.1| CUG triplet repeat RNA-binding protein 1 [synthetic construct]
Length = 512
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 161
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 162 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 218
>gi|68533093|dbj|BAE06101.1| CUGBP1 variant protein [Homo sapiens]
Length = 544
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 76 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 135
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 136 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 193
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 194 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 250
>gi|324505949|gb|ADY42547.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 476
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 5/179 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+R LFE G + E + KDK TG +G F+ + + A A
Sbjct: 34 KLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRCQAA 93
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPD----KLYVGCLSKQTSKKEIEEVFSPYGH 206
L+ PG +++V+ AD E P +P + KL+VG LSKQ ++ ++ +F+P+G
Sbjct: 94 LHDQKTLPGMNRAMQVKPADSE-SRPNSPKNAEERKLFVGMLSKQQNEDDVRALFAPFGA 152
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+++ ++R S+GCAFV+F+ A AIS L+G+ TM G+ LVV+ AD +K R
Sbjct: 153 IDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQTMPGASSSLVVKFADTEKER 211
>gi|348526886|ref|XP_003450950.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1
[Oreochromis niloticus]
Length = 458
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S +++ +F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ TM G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKER 179
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + ++ED+R LFE G++ E + + G
Sbjct: 76 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI +L+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKER 179
>gi|301776386|ref|XP_002923617.1| PREDICTED: CUGBP Elav-like family member 5-like [Ailuropoda
melanoleuca]
Length = 418
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 132/255 (51%), Gaps = 19/255 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S++++ +F P+G I++
Sbjct: 68 LHEQKTLPGMARPIQVKPADSESR---GGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT---- 266
++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ AD K RT
Sbjct: 125 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 184
Query: 267 GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
++ G TPS F ++ + +++G + P V++ P HI
Sbjct: 185 QQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHI-----Q 239
Query: 320 QVFSNWGNQEAATPI 334
Q+ + N ATPI
Sbjct: 240 QIGAVSLNGLPATPI 254
>gi|413951358|gb|AFW84007.1| hypothetical protein ZEAMMB73_397161 [Zea mays]
Length = 455
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ E D+ LF E V EV + KDK T +G CFV EEA A+ A
Sbjct: 33 KLFVGQVPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVNA 92
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ G + ++V++ADGE E KL++G L K + E+ ++FS YG++ D+
Sbjct: 93 YHNKQTLSGASSPLQVKYADGELER---LEHKLFIGMLPKNVTDTELTDLFSKYGNVTDL 149
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + ++ GCAF+++ ++ ALAAI LNG + GS PLVV+ AD +K R
Sbjct: 150 QILRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADTEKER 205
>gi|311260847|ref|XP_003128555.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 1 [Sus scrofa]
Length = 480
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI++
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQS 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|359322160|ref|XP_854891.3| PREDICTED: CUGBP, Elav-like family member 5 [Canis lupus
familiaris]
Length = 485
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 19/266 (7%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + D KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ +
Sbjct: 36 PDGMKDLDA-IKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYC 94
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEE 199
+ A A AL+ PG I+V+ AD E KL+VG L+KQ S++++
Sbjct: 95 ARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLR 152
Query: 200 VFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ A
Sbjct: 153 LFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFA 212
Query: 260 DPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSY 308
D K RT ++ G TPS F ++ + +++G + P V++
Sbjct: 213 DTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAF 272
Query: 309 RPQHIFNNSHPQVFSNWGNQEAATPI 334
P HI Q+ + N ATPI
Sbjct: 273 SPCHI-----QQIGAVSLNGLPATPI 293
>gi|62087714|dbj|BAD92304.1| bruno-like 5, RNA binding protein variant [Homo sapiens]
Length = 421
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 19/266 (7%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + D KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ +
Sbjct: 48 PDGMKDLDA-IKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYC 106
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEE 199
+ A A AL+ PG I+V+ AD E KL+VG L+KQ S++++
Sbjct: 107 ARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLR 164
Query: 200 VFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ A
Sbjct: 165 LFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFA 224
Query: 260 DPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSY 308
D K RT ++ G TPS F ++ + +++G + P V++
Sbjct: 225 DTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAF 284
Query: 309 RPQHIFNNSHPQVFSNWGNQEAATPI 334
P HI Q+ + N ATPI
Sbjct: 285 SPCHI-----QQIGAVSLNGLPATPI 305
>gi|329663834|ref|NP_001192573.1| CUGBP Elav-like family member 6 [Bos taurus]
gi|296483717|tpg|DAA25832.1| TPA: trinucleotide repeat containing 4 (predicted)-like [Bos
taurus]
Length = 480
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI++
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQS 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|301768673|ref|XP_002919757.1| PREDICTED: CUGBP Elav-like family member 6-like, partial
[Ailuropoda melanoleuca]
Length = 473
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 39 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 98
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 99 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 155
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LVV++AD + R
Sbjct: 156 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 211
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 107 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 165
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI++L+G G +S+ V+ AD +RE +
Sbjct: 166 KGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERAL 212
>gi|281340436|gb|EFB16020.1| hypothetical protein PANDA_008409 [Ailuropoda melanoleuca]
Length = 470
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 36 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 95
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 96 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 152
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LVV++AD + R
Sbjct: 153 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 208
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 104 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 162
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI++L+G G +S+ V+ AD +RE +
Sbjct: 163 KGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERAL 209
>gi|431893701|gb|ELK03522.1| CUG-BP- and ETR-3-like factor 6 [Pteropus alecto]
Length = 505
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 19 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 78
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 79 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 135
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LVV++AD + R
Sbjct: 136 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 191
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 87 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 145
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI++L+G G +S+ V+ AD +RE +
Sbjct: 146 KGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERAL 192
>gi|228480217|ref|NP_001153184.1| CUGBP Elav-like family member 2 isoform 1 [Pongo abelii]
gi|55733625|emb|CAH93489.1| hypothetical protein [Pongo abelii]
Length = 514
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 118/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQIDVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ +I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECWILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQIDVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|348529973|ref|XP_003452486.1| PREDICTED: CUGBP Elav-like family member 3-like [Oreochromis
niloticus]
Length = 453
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + ++ ++F P+G IE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDADVRKMFEPFGSIEEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKER 179
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ D+R +FE G++ E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKER 179
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+++ +P+ T+ +I +F GNVI + D+ T Q + + FV F A AI+A+
Sbjct: 370 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQTAIQAM 429
Query: 152 NGHYI 156
NG I
Sbjct: 430 NGFQI 434
>gi|410960910|ref|XP_003987030.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Felis catus]
Length = 443
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 2/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 68 LHEQKTLPGMNRPIQVKPAASEGRG--GRDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 125
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LVV++AD + R
Sbjct: 126 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 181
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI++
Sbjct: 97 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQS 155
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 156 LHGSRTMAGASSSLVVKLADTDRERAL 182
>gi|357129324|ref|XP_003566314.1| PREDICTED: CUGBP Elav-like family member 2-like [Brachypodium
distachyon]
Length = 459
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE ++ +F + V EV + +DK T +G CF+ EEA A+ A
Sbjct: 40 KLFVGQVPKQMTEAELAAMFRDVAIVDEVTVIRDKATKVSRGCCFLICPSREEADKAVNA 99
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL++G L K + E+ ++FS YG+I+D+
Sbjct: 100 YHNKRTLPGAPSPLQVKYADGELER---LEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDL 156
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ GCAF+++ +E A+AAI LNG + GS PLVV+ AD +K R
Sbjct: 157 QILRGSQQTSKAGCAFLKYETKEQAMAAIEALNGKHKIEGSSVPLVVKWADTEKER 212
>gi|22760138|dbj|BAC11082.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 6/181 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVA----PPD--KLYVGCLSKQTSKKEIEEVFSPY 204
L+ PG I+V+ AD E + PP KL+VG L+KQ S++++ +F +
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEEDVRRLFEAF 174
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
G+IE+ I+R S+GCAFV++S A AAI+ L+G TM G+ LVV+ AD K
Sbjct: 175 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGGQTMPGASSSLVVKFADTDKE 234
Query: 265 R 265
R
Sbjct: 235 R 235
>gi|325562941|gb|ADZ31338.1| cell size RNA recognition motif 2 [synthetic construct]
Length = 98
Score = 124 bits (311), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/89 (58%), Positives = 74/89 (83%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG L+KQ ++ E+EE+F +G +ED++++RDE +QSRGC FV++S +E A+AAI GL
Sbjct: 7 KLFVGSLNKQATENEVEELFLQFGRVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGL 66
Query: 242 NGTFTMRGSDQPLVVRIADPKKPRTGELR 270
NGT+TMRG +QPL+VR ADPK+P+ GE R
Sbjct: 67 NGTYTMRGCNQPLIVRFADPKRPKPGESR 95
Score = 55.5 bits (132), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + ATE ++ LF + G V +V L +D+ Q +G FVK++ E A AI
Sbjct: 7 KLFVGSLNKQATENEVEELFLQFGRVEDVYLMRDEYR-QSRGCGFVKYSSKETAMAAIDG 65
Query: 151 LNGHYIFPGEQASIKVRFADGEREHP 176
LNG Y G + VRFAD +R P
Sbjct: 66 LNGTYTMRGCNQPLIVRFADPKRPKP 91
>gi|335292432|ref|XP_003356730.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 3 [Sus scrofa]
Length = 453
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LVV++AD + R
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 219
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI++
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQS 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERAL 220
>gi|326674562|ref|XP_002664812.2| PREDICTED: CUGBP Elav-like family member 3-like [Danio rerio]
Length = 442
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE++G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARESAIKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSDEDVRKIFEPFGGIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A +AI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHSEAQSAINSLHGSRTLPGASSSLVVKFADTEKER 179
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + ++ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRKIFEPFGGIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA +AI +L+G PG +S+ V+FAD E+E V
Sbjct: 135 KGCAFVKFQSHSEAQSAINSLHGSRTLPGASSSLVVKFADTEKERGV 181
>gi|148225362|ref|NP_001079593.1| CUGBP Elav-like family member 2 [Xenopus laevis]
gi|82241541|sp|Q7ZXE2.1|CELF2_XENLA RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|27924438|gb|AAH45035.1| Cugbp2-A-prov protein [Xenopus laevis]
Length = 536
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E F NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLFSNGTTNKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKDLFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++++F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|297809825|ref|XP_002872796.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
gi|297318633|gb|EFH49055.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V +P+ +E + LF+E V EV + KDK T +G CF+ EEA +
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
A + PG + ++V++ADGE E KL+VG L K S+ E++ +FS YG I+D
Sbjct: 78 ACHNKKTLPGASSLLQVKYADGELERL---EHKLFVGMLPKNVSEAEVQSLFSKYGTIKD 134
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R + S+GCAF+++ +E A++A+ +NG M GS PLVV+ AD ++ R
Sbjct: 135 LQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERER 190
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +PR ++++ F+ G V+ + DK TG + + FV + A NAI
Sbjct: 355 ANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAID 414
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHP 176
+NG ++ G++ ++++ + + P
Sbjct: 415 VMNGRHL-GGKKLKVQLKRDNNNGQQP 440
>gi|18412143|ref|NP_567249.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|21536899|gb|AAM61231.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|222423375|dbj|BAH19660.1| AT4G03110 [Arabidopsis thaliana]
gi|332656872|gb|AEE82272.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 441
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V +P+ +E + LF+E V EV + KDK T +G CF+ EEA +
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
A + PG + ++V++ADGE E KL+VG L K S+ E++ +FS YG I+D
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERL---EHKLFVGMLPKNVSEAEVQSLFSKYGTIKD 134
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R + S+GCAF+++ +E A++A+ +NG M GS PLVV+ AD ++ R
Sbjct: 135 LQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERER 190
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +PR ++++ F+ G V+ + DK TG + + FV + A NAI
Sbjct: 349 ANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAID 408
Query: 150 ALNGHYIFPGEQASIKVR 167
+NG ++ G++ ++++
Sbjct: 409 MMNGRHL-GGKKLKVQLK 425
>gi|193204850|ref|NP_001122630.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
gi|351063346|emb|CCD71501.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
Length = 586
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +PR E D R LFE++G+V + +DK T +G CFV F ++A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + G ++++ AD E + KL++G LSK+ +++ + E+F+ +GHIED
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE----RKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP---RTG 267
++RD+ +SRGCAFV F++R A+ A ++ + TM G PLVV+ AD +K +T
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTK 231
Query: 268 ELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQ 301
+ G+P G L P L GGQ
Sbjct: 232 SMITGSGAGSPKGGAASLLQNLNPALLQQLGGGQ 265
>gi|285002208|ref|NP_001165444.1| CUG triplet repeat, RNA binding protein 2-b [Xenopus laevis]
gi|1568645|gb|AAB09041.1| Etr-3 [Xenopus laevis]
Length = 538
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E F NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLFSNGTTNKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKDLFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++++F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|348526888|ref|XP_003450951.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2
[Oreochromis niloticus]
Length = 405
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S +++ +F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ TM G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKER 179
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + ++ED+R LFE G++ E + + G
Sbjct: 76 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI +L+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKER 179
>gi|24762232|ref|NP_068757.2| CUGBP Elav-like family member 5 isoform 1 [Homo sapiens]
gi|402903694|ref|XP_003914695.1| PREDICTED: CUGBP Elav-like family member 5 [Papio anubis]
gi|74762534|sp|Q8N6W0.1|CELF5_HUMAN RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|20380221|gb|AAH28101.1| Bruno-like 5, RNA binding protein (Drosophila) [Homo sapiens]
gi|119589733|gb|EAW69327.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|119589734|gb|EAW69328.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|123981490|gb|ABM82574.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
gi|123996323|gb|ABM85763.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
Length = 485
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 19/266 (7%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + D KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ +
Sbjct: 36 PDGMKDLDA-IKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYC 94
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEE 199
+ A A AL+ PG I+V+ AD E KL+VG L+KQ S++++
Sbjct: 95 ARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLR 152
Query: 200 VFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ A
Sbjct: 153 LFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFA 212
Query: 260 DPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSY 308
D K RT ++ G TPS F ++ + +++G + P V++
Sbjct: 213 DTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAF 272
Query: 309 RPQHIFNNSHPQVFSNWGNQEAATPI 334
P HI Q+ + N ATPI
Sbjct: 273 SPCHI-----QQIGAVSLNGLPATPI 293
>gi|3924594|gb|AAC79095.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|4262139|gb|AAD14439.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|7270181|emb|CAB77796.1| putative ribonucleoprotein [Arabidopsis thaliana]
Length = 492
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V +P+ +E + LF+E V EV + KDK T +G CF+ EEA +
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
A + PG + ++V++ADGE E KL+VG L K S+ E++ +FS YG I+D
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERL---EHKLFVGMLPKNVSEAEVQSLFSKYGTIKD 134
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R + S+GCAF+++ +E A++A+ +NG M GS PLVV+ AD ++ R
Sbjct: 135 LQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERER 190
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +PR ++++ F+ G V+ + DK TG + + FV + A NAI
Sbjct: 349 ANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAID 408
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLY--VGCLSKQTSKKEI 197
+NG ++ G++ ++++ R+ P K + C SK T K +I
Sbjct: 409 MMNGRHL-GGKKLKVQLK-----RDSNNGQPSKFRRKIQCCSKITEKYQI 452
>gi|338717391|ref|XP_003363632.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Equus caballus]
Length = 540
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 151 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 210
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 211 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 267
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R S+GCAFV+F + A AAI L+G+ TM G+ LV+++AD + R
Sbjct: 268 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVIKLADTDRERA 323
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 219 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 277
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI++L+G G +S+ ++ AD +RE
Sbjct: 278 KGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVIKLADTDRER 322
>gi|193204852|ref|NP_001122631.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
gi|351063347|emb|CCD71502.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
Length = 588
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +PR E D R LFE++G+V + +DK T +G CFV F ++A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + G ++++ AD E + KL++G LSK+ +++ + E+F+ +GHIED
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE----RKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP---RTG 267
++RD+ +SRGCAFV F++R A+ A ++ + TM G PLVV+ AD +K +T
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTK 231
Query: 268 ELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQ 301
+ G+P G L P L GGQ
Sbjct: 232 SMITGSGAGSPKGGAASLLQNLNPALLQQLGGGQ 265
>gi|289812790|gb|ADD18414.1| RNA-binding protein CUGBP1/BrUNO [Glossina morsitans morsitans]
Length = 706
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 11/192 (5%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 290 GEKEPDPDNI-------KMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGC 342
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 343 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 398
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI LN TM G P
Sbjct: 399 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKTLNQNKTMEGCTSP 458
Query: 254 LVVRIADPKKPR 265
LVV+ AD +K +
Sbjct: 459 LVVKFADTQKEK 470
>gi|432908655|ref|XP_004077968.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 457
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ +F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQTDEDVRRLFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ TM G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKER 179
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 74 GFNHPAPDHINDS---GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P DS G KL+V + + T+ED+R LFE G + E + + G
Sbjct: 76 GMNRPIQVKPADSEGRGEDRKLFVGMLGKQQTDEDVRRLFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI +L+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKER 179
>gi|268533976|ref|XP_002632118.1| C. briggsae CBR-ETR-1 protein [Caenorhabditis briggsae]
Length = 574
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 8/220 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +PR E D R LFE++G+V + +DK T +G CFV F ++A A A
Sbjct: 53 KMFVGQIPRQWNEVDCRRLFEQYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGA 112
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + G ++++ AD E + KL++G LSK+ +++ + E+F+ +G IED
Sbjct: 113 LHNIKVIDGMHHPVQMKPADTENRN----ERKLFIGQLSKKHNEENLREIFAKFGLIEDC 168
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP---RTG 267
++RD +SRGCAFV F++R A+ A ++ + TM G PLVV+ AD +K +T
Sbjct: 169 SVLRDNDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTK 228
Query: 268 ELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQILPNVS 307
L G+P G N L + P L +GGQ + V+
Sbjct: 229 SLITGNGAGSPKGGANLLHGLTPAL-LQQLSGGQNIQAVA 267
>gi|326528321|dbj|BAJ93342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE ++ +F + V EV + +DK T +G CF+ EEA A+ A
Sbjct: 48 KLFVGQVPKLMTEAELAAMFRDVAIVDEVTVIRDKATKASRGCCFLICPSREEADKAVNA 107
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL++G L K + E+ ++FS YG+I+D+
Sbjct: 108 YHNKRTLPGAPSPLQVKYADGELER---LEHKLFIGMLPKNVTDVEMTDLFSQYGNIKDL 164
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ GCAF+++ +E A+AAI LNG + GS PLVV+ AD +K R
Sbjct: 165 QILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKER 220
>gi|12746396|gb|AAK07476.1|AF329266_1 CUG-BP and ETR-3 like factor 5 [Homo sapiens]
Length = 481
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + D KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ +
Sbjct: 36 PDGMKDLDA-IKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYC 94
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEE 199
+ A A AL+ PG I+V+ AD E KL+VG L+KQ S++++
Sbjct: 95 ARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLR 152
Query: 200 VFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ A
Sbjct: 153 LFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFA 212
Query: 260 DPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSY 308
D K RT ++ G TPS F ++ + +++G + P V++
Sbjct: 213 DTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAF 272
Query: 309 RPQHI 313
P HI
Sbjct: 273 SPCHI 277
>gi|146386739|pdb|2DHS|A Chain A, Solution Structure Of Nucleic Acid Binding Protein
Cugbp1ab And Its Binding Study With Dna And Rna
Length = 187
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 187
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
FT A AI+A++ G + + V+FAD
Sbjct: 155 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 187
>gi|334331817|ref|XP_001364287.2| PREDICTED: CUGBP Elav-like family member 1-like [Monodelphis
domestica]
Length = 512
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPR+ +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ I PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKILPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCNENDIRVMFSSFGQIE 161
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 162 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDK 218
>gi|301100224|ref|XP_002899202.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262104119|gb|EEY62171.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 496
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 12/199 (6%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P KL+V VPRT E+D+RP+ E G + ++V+ +DK TG +G F + + A A+
Sbjct: 31 PVKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAV 90
Query: 149 RALNGHYIFPGEQASIKVRFADGE----REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
+ L+ P ++VR A+G+ +EH KL++G + K + I +VF +
Sbjct: 91 QELHNKVTLPQSINPLQVRPAEGQAGASQEH------KLFIGMIPKTADEAAIRDVFELF 144
Query: 205 GHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
G IE+++I+R QS+GCAF++F R ALAAI +NG TM PLVV+ AD ++
Sbjct: 145 GSIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEEVNGIVTMDRGTSPLVVKFADSRR 204
Query: 264 PRTGELRGNYAFGTPSFGP 282
R R N A T ++ P
Sbjct: 205 QRLQRAR-NLAAATNAYWP 222
>gi|327259665|ref|XP_003214656.1| PREDICTED: CUGBP Elav-like family member 1-like [Anolis
carolinensis]
Length = 514
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 5/188 (2%)
Query: 81 DHINDSGIPA-KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVK 137
DH + I A K++V VPR+ +E+D+R LFE++G V E+ + +D+ Q +G CFV
Sbjct: 33 DHPDQPDIDAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVT 92
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F + A A AL+ I PG I+++ AD E+ + KL++G +SK+ ++ +I
Sbjct: 93 FYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCNENDI 150
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+FS +G IE+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+
Sbjct: 151 RVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVK 210
Query: 258 IADPKKPR 265
AD +K +
Sbjct: 211 FADTQKDK 218
>gi|341896837|gb|EGT52772.1| CBN-ETR-1 protein [Caenorhabditis brenneri]
Length = 585
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 7/203 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +PR E D R LFE++G V + +DK T +G CFV F ++A A A
Sbjct: 49 KMFVGQIPRNWNEVDCRRLFEQYGPVFSCNILRDKSTQASKGCCFVTFFHRKDAIEAQGA 108
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + G ++++ AD E + KL++G LSK+ +++ + E+FS YG IED
Sbjct: 109 LHNIKVIEGMHHPVQMKPADTENRN----ERKLFIGQLSKKHNEENLREIFSKYGQIEDC 164
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP---RTG 267
++RD+ +SRGCAFV F++R A+ A ++ + TM G PLVV+ AD +K +T
Sbjct: 165 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTK 224
Query: 268 ELRGNYAFGTPSFGPNFLEPVRP 290
L G+P N L + P
Sbjct: 225 SLITGNGGGSPKGASNLLHNLNP 247
>gi|281337967|gb|EFB13551.1| hypothetical protein PANDA_012783 [Ailuropoda melanoleuca]
Length = 462
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 19/266 (7%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + D KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ +
Sbjct: 16 PDGMKDLDA-IKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYC 74
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEE 199
+ A A AL+ PG I+V+ AD E KL+VG L+KQ S++++
Sbjct: 75 ARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLR 132
Query: 200 VFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ A
Sbjct: 133 LFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFA 192
Query: 260 DPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSY 308
D K RT ++ G TPS F ++ + +++G + P V++
Sbjct: 193 DTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAF 252
Query: 309 RPQHIFNNSHPQVFSNWGNQEAATPI 334
P HI Q+ + N ATPI
Sbjct: 253 SPCHI-----QQIGAVSLNGLPATPI 273
>gi|606976|gb|AAA81375.1| ribonucleoprotein [Xenopus laevis]
Length = 462
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ +F P+G+I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE GN+ E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|147907254|ref|NP_001079936.1| CUGBP Elav-like family member 3-A [Xenopus laevis]
gi|152013388|sp|Q91579.2|CEL3A_XENLA RecName: Full=CUGBP Elav-like family member 3-A; Short=CELF-3A;
AltName: Full=Bruno-like protein 1-A; AltName:
Full=CUG-BP- and ETR-3-like factor 3-A; AltName:
Full=ELAV-type RNA-binding protein 1-A; Short=ETR-1-A;
AltName: Full=RNA-binding protein BRUNOL-1-A; AltName:
Full=Trinucleotide repeat-containing gene 4 protein A
gi|34785486|gb|AAH57704.1| Etr-1 protein [Xenopus laevis]
gi|47937574|gb|AAH72134.1| Etr-1 protein [Xenopus laevis]
Length = 462
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ +F P+G+I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE GN+ E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|310689909|pdb|3NNC|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 5 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 65 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 123
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD
Sbjct: 124 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 175
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGCAFVQFSHREMALAAI 238
K++VG + + S+K++ E+F YG + +I ++RD + QS+GC FV F R+ AL A
Sbjct: 5 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 239 SGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
+ L+ + G P+ ++ AD +K E R
Sbjct: 65 NALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 96
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 84 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVT 142
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
FT A AI+A++ G + + V+FAD
Sbjct: 143 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 175
>gi|17532857|ref|NP_493673.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
gi|1289522|gb|AAA98566.1| elav-type ribonucleoprotein [Caenorhabditis elegans]
gi|151936111|gb|ABS18832.1| ELAV-type RNA binding protein variant A [Caenorhabditis elegans]
gi|351063336|emb|CCD71491.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
Length = 584
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +PR E D R LFE++G+V + +DK T +G CFV F ++A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + G ++++ AD E + KL++G LSK+ +++ + E+F+ +GHIED
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE----RKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP---RTG 267
++RD+ +SRGCAFV F++R A+ A ++ + TM G PLVV+ AD +K +T
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTK 231
Query: 268 ELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQ 301
+ G+P G L P L GGQ
Sbjct: 232 SMITGSGAGSPKGGAASLLQNLNPALLQQLGGGQ 265
>gi|124286791|ref|NP_034290.2| CUGBP Elav-like family member 2 isoform 6 [Mus musculus]
Length = 478
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|168043683|ref|XP_001774313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674305|gb|EDQ60815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
+ +N + KL+V +P+ +E+ + +F E G V E+ + KDK T +G CF+ +T
Sbjct: 7 NGVNRAVDSVKLFVGQLPKQMSEQQLVEIFSEAGTVNEINIIKDKLTKLSRGCCFLTYTT 66
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
+EA AI + + ++V++ADGE E KL++G L K SK ++ V
Sbjct: 67 RQEADKAIEIFHNKRTLQPVASPLQVKYADGEMERL---EHKLFIGMLPKAASKADVTAV 123
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
FS YG I+++ +++ S+GCAF+++ +E A+AAI LNG M GS LVV+ AD
Sbjct: 124 FSQYGTIKELSVIKGSQPTSKGCAFLKYETKEQAVAAIEALNGVHKMEGSPSALVVKWAD 183
Query: 261 PKKPR 265
+K R
Sbjct: 184 TEKER 188
>gi|348575367|ref|XP_003473461.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Cavia
porcellus]
gi|354467974|ref|XP_003496442.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4
[Cricetulus griseus]
Length = 478
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|158253638|gb|AAI54064.1| tnrc4 protein [Xenopus (Silurana) tropicalis]
Length = 462
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ +F P+G+I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE GN+ E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|358413030|ref|XP_610805.5| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 562
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 132/255 (51%), Gaps = 18/255 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ + + A A A
Sbjct: 123 KLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTA 182
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S++++ +F P+G I++
Sbjct: 183 LHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 240
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT---- 266
++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ AD K RT
Sbjct: 241 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 300
Query: 267 GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
++ G TPS F ++ + +++G + P V++ P HI
Sbjct: 301 QQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHI-----Q 355
Query: 320 QVFSNWGNQEAATPI 334
Q+ + N ATPI
Sbjct: 356 QIGAVSLNGLPATPI 370
>gi|193204854|ref|NP_001122632.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
gi|151936119|gb|ABS18836.1| ELAV-type RNA binding protein variant E [Caenorhabditis elegans]
gi|351063348|emb|CCD71503.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
Length = 513
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +PR E D R LFE++G+V + +DK T +G CFV F ++A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + G ++++ AD E + KL++G LSK+ +++ + E+F+ +GHIED
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE----RKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP---RTG 267
++RD+ +SRGCAFV F++R A+ A ++ + TM G PLVV+ AD +K +T
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVKTK 231
Query: 268 ELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQ 301
+ G+P G L P L GGQ
Sbjct: 232 SMITGSGAGSPKGGAASLLQNLNPALLQQLGGGQ 265
>gi|194385764|dbj|BAG65257.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIR 149
++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 1 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 60
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE+
Sbjct: 61 ALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 118
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 119 CRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 174
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ + + TE DIR +F G + E + + G +G FV FT A AI+A
Sbjct: 91 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVTFTTRAMAQTAIKA 149
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
++ G + + V+FAD +++
Sbjct: 150 MHQAQTMEGCSSPMVVKFADTQKD 173
>gi|30679366|ref|NP_849294.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|17529054|gb|AAL38737.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|332656873|gb|AEE82273.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 439
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V +P+ +E + LF+E V EV + KDK T +G CF+ EEA +
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
A + PG + ++V++ADGE E KL+VG L K S+ E++ +FS YG I+D
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERL---EHKLFVGMLPKNVSEAEVQSLFSKYGTIKD 134
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R + S+GCAF+++ +E A++A+ +NG M GS PLVV+ AD ++ R
Sbjct: 135 LQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERER 190
>gi|294877844|ref|XP_002768155.1| ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
gi|239870352|gb|EER00873.1| ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
Length = 391
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 7/185 (3%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC-FVKFTIFEEAGN 146
IP +L+V +P E++IR LFE +G V EV L + K G+QQ C FVKF EA
Sbjct: 7 IPVRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQTGCAFVKFGAVHEAAT 66
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD------KLYVGCLSKQTSKKEIEEV 200
AI++LNG Y ++V+FA+GE E P D KL+VG + TS E++++
Sbjct: 67 AIKSLNGTYKADDAPGFVQVQFANGEPERLGLPEDTEGYSQKLFVGNVPPSTSDDELKQI 126
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F YG++ + + + + AFV+FS + AL AI LN +T G P+ V+ AD
Sbjct: 127 FDEYGNVTEAYSLESKRASGNKAAFVRFSKKSDALKAIDALNDKYTFPGEPHPITVKCAD 186
Query: 261 PKKPR 265
++ R
Sbjct: 187 TREQR 191
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 87 GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
G KL+V VP + ++++++ +F+E+GNV E + KR + FV+F+ +A
Sbjct: 104 GYSQKLFVGNVPPSTSDDELKQIFDEYGNVTEAYSLESKRASGNKA-AFVRFSKKSDALK 162
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVA 178
AI ALN Y FPGE I V+ AD RE +A
Sbjct: 163 AIDALNDKYTFPGEPHPITVKCAD-TREQRLA 193
>gi|410977611|ref|XP_003995197.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Felis catus]
Length = 482
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 102/176 (57%), Gaps = 2/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G + F + A + A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCALLSFCARDAALKSQTA 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + P I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHRQEVLPXMNRPIQVKPADSESRG--GKDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 172
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 173 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 228
>gi|208022666|ref|NP_001129075.1| CUG-BP- and ETR-3-like factor 5 [Rattus norvegicus]
Length = 395
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 132/255 (51%), Gaps = 18/255 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S++++ +F P+G I++
Sbjct: 68 LHEQKTLPGMARPIQVKPADSENRG--GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 125
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT---- 266
++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ AD K RT
Sbjct: 126 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 185
Query: 267 GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
++ G TPS F ++ + +++G + P V++ P HI
Sbjct: 186 QQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFPPCHI-----Q 240
Query: 320 QVFSNWGNQEAATPI 334
Q+ + N ATPI
Sbjct: 241 QIGTVSLNGLPATPI 255
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
D N G KL+V + + +EED+ LF+ G + E + + G +G FVKF+
Sbjct: 87 DSENRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGP-DGSSKGCAFVKFSS 145
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
EA AI AL+G PG +S+ V+FAD ++E + ++ VG L T +
Sbjct: 146 HTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGILTPSLTLP-- 202
Query: 201 FSPY 204
FSPY
Sbjct: 203 FSPY 206
>gi|95007487|emb|CAJ20709.1| RNA binding protein, putative [Toxoplasma gondii RH]
gi|221480877|gb|EEE19298.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221501598|gb|EEE27368.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 475
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 16/209 (7%)
Query: 67 PFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKR 126
P G R H AP + KL+V VP++ + +RP+FEE G V E V+ +DK
Sbjct: 20 PVSGVPRPAGHMAPR------VEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKA 73
Query: 127 TGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE---------HPV 177
TG+ + F+K A AIR LN I I V++A GE E P
Sbjct: 74 TGKHKNSAFIKMDSIAAADAAIRGLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPG 133
Query: 178 APPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMALA 236
KL++G + + +++E+ + FS YG +E++F+++D ++ + +GC FV+F+ +E AL
Sbjct: 134 QDQAKLFIGSIPRTMTEEEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
A+ L+G T G +P+ VR A+ K R
Sbjct: 194 AVRTLSGKHTFEGCTRPVEVRFAESKAAR 222
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 84 NDSGIP-AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFE 142
N G P A ++V VP T D+ F GNV+ + D+ TG+ +G+ FV + E
Sbjct: 338 NAEGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVE 397
Query: 143 EAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
A A+ +NG F +KV GE ++
Sbjct: 398 SAATAVNNMNG---FMAGGKRLKVSVKKGEEQY 427
>gi|297300473|ref|XP_002805600.1| PREDICTED: CUGBP Elav-like family member 2-like [Macaca mulatta]
Length = 501
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|194388952|dbj|BAG61493.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|82237387|sp|Q6P0B1.1|CELF2_DANRE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|41351000|gb|AAH65686.1| Cugbp2 protein [Danio rerio]
Length = 514
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 10/214 (4%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
S+E NG G + P PD I K++V +PR+ +E++++ LFE +
Sbjct: 15 STEELLLSNGTAGKMNGALEHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPY 67
Query: 114 GNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG 171
G V ++ + +D+ Q +G CFV F + A A AL+ G I+++ AD
Sbjct: 68 GAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADS 127
Query: 172 EREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHR 231
E+ + V KL++G +SK+ ++ +I +FSPYG IE+ I+R SRGCAFV FS R
Sbjct: 128 EKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTR 186
Query: 232 EMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 187 AMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 220
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+KE++E+F PYG + I I+RD + QS+GC
Sbjct: 30 NGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 89
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 90 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDR 136
>gi|395539009|ref|XP_003771466.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Sarcophilus
harrisii]
Length = 478
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|81911882|sp|Q792H5.1|CELF2_RAT RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=Protein ETR-R3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=rNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|81917931|sp|Q9Z0H4.1|CELF2_MOUSE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=mETR-3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=mNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|4249670|gb|AAD13762.1| apoptosis-related RNA binding protein [Rattus norvegicus]
gi|4249674|gb|AAD13764.1| apoptosis-related RNA binding protein [Mus musculus]
gi|20073073|gb|AAH26856.1| Cugbp2 protein [Mus musculus]
Length = 508
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|68303647|ref|NP_001020248.1| CUGBP Elav-like family member 2 isoform 3 [Homo sapiens]
gi|402879611|ref|XP_003903425.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Papio anubis]
gi|426363975|ref|XP_004049102.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Gorilla
gorilla gorilla]
gi|74754421|sp|O95319.1|CELF2_HUMAN RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=Neuroblastoma apoptosis-related
RNA-binding protein; Short=hNAPOR; AltName:
Full=RNA-binding protein BRUNOL-3
gi|152013391|sp|Q5R8Y8.2|CELF2_PONAB RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=RNA-binding protein BRUNOL-3
gi|4249666|gb|AAD13760.1| apoptosis-related RNA binding protein [Homo sapiens]
gi|119606756|gb|EAW86350.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_e [Homo
sapiens]
gi|380808896|gb|AFE76323.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|380808898|gb|AFE76324.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|410349367|gb|JAA41287.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 508
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|332833593|ref|XP_003312501.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Pan
troglodytes]
gi|397515222|ref|XP_003827855.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Pan paniscus]
gi|403278083|ref|XP_003930658.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|380808894|gb|AFE76322.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
Length = 514
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|189339278|ref|NP_795928.2| CUG-BP- and ETR-3-like factor 5 [Mus musculus]
Length = 395
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 132/255 (51%), Gaps = 18/255 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S++++ +F P+G I++
Sbjct: 68 LHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 125
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT---- 266
++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ AD K RT
Sbjct: 126 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 185
Query: 267 GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
++ G TPS F ++ + +++G + P V++ P HI
Sbjct: 186 QQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFPPCHI-----Q 240
Query: 320 QVFSNWGNQEAATPI 334
Q+ + N ATPI
Sbjct: 241 QIGAVSLNGLPATPI 255
>gi|134152696|ref|NP_058893.2| CUGBP Elav-like family member 2 isoform 1 [Rattus norvegicus]
gi|3451291|emb|CAA09103.1| ETR-R3b protein [Rattus norvegicus]
Length = 532
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|444707599|gb|ELW48864.1| CUGBP Elav-like family member 1 [Tupaia chinensis]
Length = 487
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 106/178 (59%), Gaps = 4/178 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRG-CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRG CAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 ECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 193
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + + G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAFVT 155
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 156 FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 192
>gi|156102324|ref|XP_001616855.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805729|gb|EDL47128.1| RNA binding protein, putative [Plasmodium vivax]
Length = 507
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 113/193 (58%), Gaps = 13/193 (6%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PAP IPAKL+V+ +P++ TE DI+ +FEE+G++ +VV KDK+ + FV
Sbjct: 79 NPAPS------IPAKLFVSSIPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFV 132
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------HPVAPPD-KLYVGCLS 189
+ A AI+ L+G + + V+FA GE E H + KL+VG L
Sbjct: 133 RMESIYYAQKAIQDLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLP 192
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
K+ ++++I +F+ YG++ +++I+++ S+ CAFV ++++E + AI LNG +
Sbjct: 193 KEIAEEQIRNLFNRYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIEN 252
Query: 250 SDQPLVVRIADPK 262
+++P+ VR A+ K
Sbjct: 253 AEKPIEVRFAETK 265
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ A +++ +P + D+ F GN+I + +K TG+ +G+ FV + + A NA
Sbjct: 396 VGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNVDSAINA 455
Query: 148 IRALNG 153
++ +NG
Sbjct: 456 VKYMNG 461
>gi|74220804|dbj|BAE31371.1| unnamed protein product [Mus musculus]
Length = 440
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|413944942|gb|AFW77591.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 456
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ +E ++ +F V EV + +D+ T +G CFV EEA A+
Sbjct: 37 KLFVGQVPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEADKAVTT 96
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL+VG L K + E+ ++FS YG+I+D+
Sbjct: 97 YHNKRTLPGASSPLQVKYADGELER---LEHKLFVGMLPKNVTHAEMTDLFSKYGNIKDL 153
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ GCAF+++ +E A+AAI LNGT + GS PLVV+ AD +K R
Sbjct: 154 QILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKER 209
>gi|354467972|ref|XP_003496441.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3
[Cricetulus griseus]
Length = 532
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|348575365|ref|XP_003473460.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Cavia
porcellus]
Length = 532
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|344239315|gb|EGV95418.1| CUG-BP- and ETR-3-like factor 2 [Cricetulus griseus]
Length = 508
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 60 FFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV 119
F NG G + P PD I K++V +PR+ +E++++ LFE +G V ++
Sbjct: 17 FSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQI 69
Query: 120 VLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+ +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ + V
Sbjct: 70 NVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV 129
Query: 178 APPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAA 237
KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA A
Sbjct: 130 -EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNA 188
Query: 238 ISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I ++ + TM G P+VV+ AD +K +
Sbjct: 189 IKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|62858167|ref|NP_001016491.1| CUG-BP- and ETR-3-like factor 3 [Xenopus (Silurana) tropicalis]
gi|89272955|emb|CAJ83148.1| trinucleotide repeat containing 4 [Xenopus (Silurana) tropicalis]
Length = 313
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ +F P+G+I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE GN+ E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|410963191|ref|XP_003988149.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Felis catus]
Length = 514
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|354467970|ref|XP_003496440.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Cricetulus griseus]
Length = 526
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|156717754|ref|NP_001096417.1| CUGBP Elav-like family member 2 [Xenopus (Silurana) tropicalis]
gi|152013392|sp|A4IIM2.1|CELF2_XENTR RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|134024252|gb|AAI36077.1| LOC100125022 protein [Xenopus (Silurana) tropicalis]
Length = 513
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 10/210 (4%)
Query: 58 TDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVI 117
+D NG G + P PD I K++V +PR+ +E++++ LFE +G V
Sbjct: 10 SDRINGTTNKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKDLFEPYGAVY 62
Query: 118 EVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 63 QINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSN 122
Query: 176 PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMAL 235
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 123 AV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQ 181
Query: 236 AAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 NAIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++++F PYG + I ++RD + QS+GC
Sbjct: 21 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGC 80
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 81 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 127
>gi|237757269|ref|NP_001153764.1| CUGBP Elav-like family member 2 isoform 7 [Mus musculus]
Length = 472
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 45 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 156
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 157 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 216
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 217 IVVKFADTQKDK 228
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 38 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 144
>gi|237844787|ref|XP_002371691.1| CELF family protein, putative [Toxoplasma gondii ME49]
gi|211969355|gb|EEB04551.1| CELF family protein, putative [Toxoplasma gondii ME49]
Length = 475
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 67 PFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKR 126
P G R H AP + KL+V VP++ + +RP+FEE G V E V+ +DK
Sbjct: 20 PVSGVPRPAGHMAPR------VEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKA 73
Query: 127 TGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE---------HPV 177
TG+ + F+K A AIR LN I I V++A GE E P
Sbjct: 74 TGKHKNSAFIKMDSIAAADAAIRGLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPG 133
Query: 178 APPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMALA 236
KL++G + + ++ E+ + FS YG +E++F+++D ++ + +GC FV+F+ +E AL
Sbjct: 134 QDQAKLFIGSIPRTMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
A+ L+G T G +P+ VR A+ K R
Sbjct: 194 AVRTLSGKHTFEGCTRPVEVRFAESKAAR 222
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 84 NDSGIP-AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFE 142
N G P A ++V VP T D+ F GNV+ + D+ TG+ +G+ FV + E
Sbjct: 338 NAEGPPGANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFVSYDNVE 397
Query: 143 EAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
A A+ +NG F +KV GE ++
Sbjct: 398 SAATAVNNMNG---FMAGGKRLKVSVKKGEEQY 427
>gi|296206140|ref|XP_002750082.1| PREDICTED: CUGBP Elav-like family member 2 [Callithrix jacchus]
Length = 531
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 52 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 104
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 105 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 163
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 164 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 223
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 224 IVVKFADTQKDK 235
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 45 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 104
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 105 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 151
>gi|291401988|ref|XP_002717491.1| PREDICTED: CUG triplet repeat, RNA binding protein 2-like
[Oryctolagus cuniculus]
Length = 532
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|159032031|ref|NP_001103698.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|237757271|ref|NP_001153765.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|285026421|ref|NP_001077055.2| CUGBP Elav-like family member 2 isoform 2 [Rattus norvegicus]
gi|148676041|gb|EDL07988.1| CUG triplet repeat, RNA binding protein 2 [Mus musculus]
gi|149021034|gb|EDL78641.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
gi|149021035|gb|EDL78642.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 526
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|22137759|gb|AAH36391.1| CUGBP2 protein [Homo sapiens]
gi|119606753|gb|EAW86347.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 521
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 11 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 63
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 64 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 123
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 124 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 182
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 183 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 21 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 80
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 81 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 127
>gi|402879615|ref|XP_003903427.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Papio anubis]
Length = 521
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 23 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 75
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 76 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 135
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 136 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 194
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 195 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 33 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 92
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 93 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 139
>gi|348575361|ref|XP_003473458.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Cavia
porcellus]
Length = 526
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|338721613|ref|XP_003364408.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Equus
caballus]
gi|345793484|ref|XP_857942.2| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Canis lupus
familiaris]
Length = 514
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|426241648|ref|XP_004014701.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 2
[Ovis aries]
Length = 551
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 119/217 (54%), Gaps = 12/217 (5%)
Query: 53 MSSEPTDFF--NGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLF 110
++ P F NG G + P PD I K++V +PR+ +E++++ LF
Sbjct: 58 LTLAPASLFDSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELF 110
Query: 111 EEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRF 168
E +G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++
Sbjct: 111 EPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKP 170
Query: 169 ADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQF 228
AD E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R+ SRGCAFV F
Sbjct: 171 ADSEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILREPDGLSRGCAFVTF 229
Query: 229 SHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
S R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 230 STRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 266
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 76 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 135
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 136 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 182
>gi|119606755|gb|EAW86349.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 509
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 11 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 63
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 64 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 123
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 124 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 182
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 183 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 21 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 80
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 81 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 127
>gi|4249668|gb|AAD13761.1| apoptosis-related RNA binding protein [Homo sapiens]
Length = 509
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 11 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 63
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 64 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 123
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 124 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 182
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 183 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 21 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 80
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 81 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 127
>gi|413944941|gb|AFW77590.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 435
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 103/177 (58%), Gaps = 4/177 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ +E ++ +F V EV + +D+ T +G CFV EEA A+
Sbjct: 36 VKLFVGQVPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEADKAVT 95
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
+ PG + ++V++ADGE E KL+VG L K + E+ ++FS YG+I+D
Sbjct: 96 TYHNKRTLPGASSPLQVKYADGELER---LEHKLFVGMLPKNVTHAEMTDLFSKYGNIKD 152
Query: 210 IFIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R + S+ GCAF+++ +E A+AAI LNGT + GS PLVV+ AD +K R
Sbjct: 153 LQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKER 209
>gi|170584368|ref|XP_001896973.1| RNA binding protein [Brugia malayi]
gi|158595662|gb|EDP34201.1| RNA binding protein, putative [Brugia malayi]
Length = 489
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 105/179 (58%), Gaps = 5/179 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+R LFE G + E + KDK TG +G F+ + + A A
Sbjct: 27 KLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRCQAA 86
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPD----KLYVGCLSKQTSKKEIEEVFSPYGH 206
L+ PG +++V+ AD E P +P + KL+VG LSKQ ++ ++ +F+P+G
Sbjct: 87 LHDQKTLPGMNRAMQVKPADNE-SRPESPKNAEERKLFVGMLSKQHNEDDVRSLFAPFGV 145
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+++ ++R S+GCAFV+F+ A AI+ L+G+ TM G+ LVV+ AD +K R
Sbjct: 146 IDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 204
>gi|197099692|ref|NP_001125976.1| CUGBP Elav-like family member 1 [Pongo abelii]
gi|75070672|sp|Q5R995.1|CELF1_PONAB RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|55729876|emb|CAH91665.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+ SRGCA V F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 163 ECRILWGPDGLSRGCALVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE--VVLPKDKRTGQQQGYCF 135
PA N++ KL++ + + TE DIR +F G + E ++ D G +G
Sbjct: 123 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILWGPD---GLSRGCAL 179
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
V FT A AI+A++ G + + V+FAD +++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 218
>gi|14701786|gb|AAK72224.1| neuroplastoma apoptosis-related RNA-binding protein 2 [Homo
sapiens]
Length = 509
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 11 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 63
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 64 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 123
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 124 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 182
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 183 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 21 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 80
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 81 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 127
>gi|380808892|gb|AFE76321.1| CUGBP Elav-like family member 2 isoform 2 [Macaca mulatta]
Length = 515
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 23 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 75
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 76 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 135
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 136 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 194
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 195 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 33 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 92
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 93 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 139
>gi|134152680|ref|NP_006552.3| CUGBP Elav-like family member 2 isoform 2 [Homo sapiens]
gi|348575363|ref|XP_003473459.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Cavia
porcellus]
Length = 521
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 23 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 75
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 76 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 135
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 136 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 194
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 195 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 33 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 92
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 93 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 139
>gi|66269433|gb|AAY43161.1| napor protein isoform [Danio rerio]
Length = 483
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 10/214 (4%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
S+E NG G + P PD I K++V +PR+ +E++++ LFE +
Sbjct: 33 STEELLLSNGTAGKMNGALEHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPY 85
Query: 114 GNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG 171
G V ++ + +D+ Q +G CFV F + A A AL+ G I+++ AD
Sbjct: 86 GAVYQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADS 145
Query: 172 EREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHR 231
E+ + V KL++G +SK+ ++ +I +FSPYG IE+ I+R SRGCAFV FS R
Sbjct: 146 EKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTR 204
Query: 232 EMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 205 AMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 238
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+KE++E+F PYG + I I+RD + QS+GC
Sbjct: 48 NGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 107
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 108 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDR 154
>gi|402879617|ref|XP_003903428.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Papio anubis]
Length = 533
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 23 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 75
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 76 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 135
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 136 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 194
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 195 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 33 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 92
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 93 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 139
>gi|332833599|ref|XP_507653.3| PREDICTED: CUGBP, Elav-like family member 2 isoform 4 [Pan
troglodytes]
gi|410349369|gb|JAA41288.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 521
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 23 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 75
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 76 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 135
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 136 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 194
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 195 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 33 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 92
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 93 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 139
>gi|197100912|ref|NP_001126925.1| CUGBP Elav-like family member 2 isoform 2 [Pongo abelii]
gi|55733179|emb|CAH93273.1| hypothetical protein [Pongo abelii]
Length = 484
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVSFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVSFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|410225364|gb|JAA09901.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263770|gb|JAA19851.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263772|gb|JAA19852.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305936|gb|JAA31568.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349365|gb|JAA41286.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 519
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 23 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 75
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 76 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 135
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 136 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 194
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 195 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 33 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 92
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 93 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 139
>gi|159032033|ref|NP_001103699.1| CUGBP Elav-like family member 2 isoform 2 [Mus musculus]
gi|74209492|dbj|BAE23295.1| unnamed protein product [Mus musculus]
Length = 524
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 45 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 156
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 157 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 216
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 217 IVVKFADTQKDK 228
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 38 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 144
>gi|410225362|gb|JAA09900.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263776|gb|JAA19854.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305934|gb|JAA31567.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305938|gb|JAA31569.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349361|gb|JAA41284.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349363|gb|JAA41285.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 515
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 23 DRINGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 75
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 76 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 135
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 136 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 194
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 195 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 33 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 92
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 93 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 139
>gi|159032039|ref|NP_001103702.1| CUGBP Elav-like family member 2 isoform 5 [Mus musculus]
gi|4249672|gb|AAD13763.1| apoptosis-related RNA binding protein [Mus musculus]
gi|120538103|gb|AAI29097.1| Cugbp2 protein [Rattus norvegicus]
Length = 484
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|395539007|ref|XP_003771465.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Sarcophilus
harrisii]
Length = 526
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|74198996|dbj|BAE30715.1| unnamed protein product [Mus musculus]
Length = 488
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|1568643|gb|AAB09040.1| RNA-binding protein BRUNOL3 [Homo sapiens]
Length = 490
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|74142177|dbj|BAE31857.1| unnamed protein product [Mus musculus]
Length = 495
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 16 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 68
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 69 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 127
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 128 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 187
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 188 IVVKFADTQKDK 199
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 9 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 68
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 69 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 115
>gi|395539011|ref|XP_003771467.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Sarcophilus
harrisii]
Length = 536
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|393906351|gb|EJD74254.1| HrETR-1 protein [Loa loa]
Length = 507
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 105/179 (58%), Gaps = 5/179 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+R LFE G + E + KDK TG +G F+ + + A A
Sbjct: 45 KLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRCQAA 104
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPD----KLYVGCLSKQTSKKEIEEVFSPYGH 206
L+ PG +++V+ AD E P +P + KL+VG LSKQ ++ ++ +F+P+G
Sbjct: 105 LHDQKTLPGMNRAMQVKPADNE-SRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGV 163
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+++ ++R S+GCAFV+F+ A AI+ L+G+ TM G+ LVV+ AD +K R
Sbjct: 164 IDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 222
>gi|159032037|ref|NP_001103701.1| CUGBP Elav-like family member 2 isoform 4 [Mus musculus]
gi|3452501|emb|CAA09102.1| ETR-R3a protein [Rattus norvegicus]
gi|74144402|dbj|BAE36053.1| unnamed protein product [Mus musculus]
Length = 490
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|429328279|gb|AFZ80039.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 525
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL++A +P++ E +I+ +FEE G V EV + +DK T + FV+ +A A
Sbjct: 68 VEIKLFLARIPKSYEESEIKKMFEEFGKVKEVAVIRDKNTNAHKCCAFVRMCSISQADAA 127
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREH---------PVAPPDKLYVGCLSKQTSKKEIE 198
IR+LN + S+++++A GE + KL+VG L K + I
Sbjct: 128 IRSLNNQCVVDTALGSVQIKYAVGETDRLGFTSLVGEAGCNDAKLFVGSLPKTVDEAAIR 187
Query: 199 EVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
E+F YG ++D++I++D+ +GCAFV+ +++E L AI LNG T+ G +PL VR
Sbjct: 188 ELFKDYGTLDDVYIMKDQAGNGKGCAFVKMAYKEQGLFAIRSLNGKRTLEGCTRPLEVRF 247
Query: 259 AD 260
A+
Sbjct: 248 AE 249
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 86 SGIP-AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEA 144
SG P + L++ +P T D+ F + G VI + DK TG+ +GY FV + + A
Sbjct: 421 SGPPGSNLFIFHIPNEWTYNDLVRSFSQFGRVISARIATDKSTGRHKGYAFVSYDNPDSA 480
Query: 145 GNAIRALNGHYIFPGEQASIKVRFAD--GEREHPVAP 179
A+ +NG + G++ + V+ D G+ + P+ P
Sbjct: 481 SQAVANMNGFTVL-GKRLKVTVKKGDEGGQTKFPLPP 516
>gi|354467968|ref|XP_003496439.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Cricetulus griseus]
Length = 520
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 45 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 156
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 157 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 216
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 217 IVVKFADTQKDK 228
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 38 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 144
>gi|402879613|ref|XP_003903426.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Papio anubis]
gi|426363973|ref|XP_004049101.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Gorilla
gorilla gorilla]
gi|14701777|gb|AAK72223.1| neuroplastoma apoptosis-related RNA-binding protein 3 [Homo
sapiens]
gi|194390100|dbj|BAG61812.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|159032035|ref|NP_001103700.1| CUGBP Elav-like family member 2 isoform 3 [Mus musculus]
gi|74227938|dbj|BAE37963.1| unnamed protein product [Mus musculus]
Length = 520
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 45 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 156
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 157 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 216
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 217 IVVKFADTQKDK 228
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 38 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 144
>gi|348667006|gb|EGZ06832.1| hypothetical protein PHYSODRAFT_353005 [Phytophthora sojae]
Length = 507
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 11/182 (6%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P KL+V VPRT E+D+RP+ E G + ++V+ +DK TG +G F + + A A+
Sbjct: 35 PVKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAV 94
Query: 149 RALNGHYIFPGEQASIKVRFADGE----REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
+ L+ P ++VR A+G+ +EH KL++G + K + I EVF +
Sbjct: 95 QELHNKVTLPQSINPLQVRPAEGQAGASQEH------KLFIGMIPKTADEAAIREVFELF 148
Query: 205 GHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
G IE+++I+R QS+GCAF++F R ALAAI +NG TM PLVV+ AD ++
Sbjct: 149 GTIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEEVNGNVTMDRGTSPLVVKFADSRR 208
Query: 264 PR 265
R
Sbjct: 209 QR 210
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 168 FADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFV 226
+AD + PV KL+VG + + + ++ V +G +ED+ I+RD++ + RGCAF
Sbjct: 27 YADQQHSGPV----KLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFA 82
Query: 227 QFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
+ R+ A A+ L+ T+ S PL VR A+
Sbjct: 83 SYFTRDAAEKAVQELHNKVTLPQSINPLQVRPAE 116
>gi|68303645|ref|NP_001020247.1| CUGBP Elav-like family member 2 isoform 1 [Homo sapiens]
gi|332833597|ref|XP_003312503.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Pan
troglodytes]
gi|397515224|ref|XP_003827856.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Pan paniscus]
gi|403278087|ref|XP_003930660.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Saimiri
boliviensis boliviensis]
gi|4104559|gb|AAD02074.1| neuroblastoma apoptosis-related RNA binding protein [Homo sapiens]
gi|15217394|gb|AAK92699.1| neuroplastoma apoptosis-related RNA-binding protein 1 [Homo
sapiens]
gi|119606754|gb|EAW86348.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_c [Homo
sapiens]
Length = 490
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|55731735|emb|CAH92572.1| hypothetical protein [Pongo abelii]
Length = 490
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|3927998|emb|CAA77110.1| elav-type RNA-binding protein [Mus musculus]
Length = 484
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|351703688|gb|EHB06607.1| CUG-BP- and ETR-3-like factor 2, partial [Heterocephalus glaber]
Length = 496
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 15 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 67
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 68 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 126
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 127 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 186
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 187 IVVKFADTQKDK 198
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 8 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 67
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 68 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 114
>gi|134152719|ref|NP_001077060.1| CUGBP Elav-like family member 2 isoform 4 [Homo sapiens]
gi|332833595|ref|XP_003312502.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Pan
troglodytes]
gi|397515226|ref|XP_003827857.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Pan paniscus]
gi|403278085|ref|XP_003930659.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Saimiri
boliviensis boliviensis]
gi|16660677|gb|AAL27627.1|AF432906_1 neuroblastoma apoptosis-related RNA-binding protein isoform 4 [Homo
sapiens]
gi|119606752|gb|EAW86346.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|221046096|dbj|BAH14725.1| unnamed protein product [Homo sapiens]
gi|410263774|gb|JAA19853.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 488
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|327272098|ref|XP_003220823.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Anolis
carolinensis]
Length = 536
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|383415259|gb|AFH30843.1| CUGBP Elav-like family member 2 isoform 4 [Macaca mulatta]
Length = 488
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|194375526|dbj|BAG56708.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 17 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 69
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 70 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 128
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 129 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 188
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 189 IVVKFADTQKDK 200
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 10 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 69
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 70 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 116
>gi|326911121|ref|XP_003201910.1| PREDICTED: CUGBP Elav-like family member 2-like [Meleagris
gallopavo]
Length = 526
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|297604406|ref|NP_001055367.2| Os05g0373400 [Oryza sativa Japonica Group]
gi|215707181|dbj|BAG93641.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676313|dbj|BAF17281.2| Os05g0373400 [Oryza sativa Japonica Group]
Length = 466
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE+++ +F V EV L +DK T +G CF+ EEA A+ A
Sbjct: 47 KLFVGQVPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADKAVNA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL++G L K + E+ ++FS YG+I+D+
Sbjct: 107 YHNKRTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDL 163
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ GCAF+++ +E ALAAI LNG + GS PLVV+ AD +K R
Sbjct: 164 QILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKER 219
>gi|218196669|gb|EEC79096.1| hypothetical protein OsI_19721 [Oryza sativa Indica Group]
Length = 555
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE+++ +F V EV L +DK T +G CF+ EEA A+ A
Sbjct: 47 KLFVGQVPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADKAVNA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL++G L K + E+ ++FS YG+I+D+
Sbjct: 107 YHNKRTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDL 163
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R + S+ GCAF+++ +E ALAAI LNG + GS PLVV+ AD +K R
Sbjct: 164 QILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKER 219
>gi|327272092|ref|XP_003220820.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Anolis
carolinensis]
Length = 536
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|281345849|gb|EFB21433.1| hypothetical protein PANDA_019092 [Ailuropoda melanoleuca]
Length = 512
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 15 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 67
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 68 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 126
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 127 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 186
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 187 IVVKFADTQKDK 198
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 8 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 67
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 68 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 114
>gi|194227176|ref|XP_001916706.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Equus
caballus]
gi|344277695|ref|XP_003410635.1| PREDICTED: CUGBP Elav-like family member 2-like [Loxodonta
africana]
gi|345793487|ref|XP_003433765.1| PREDICTED: CUGBP, Elav-like family member 2 [Canis lupus
familiaris]
Length = 488
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|410963193|ref|XP_003988150.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Felis catus]
Length = 496
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 17 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 69
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 70 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 128
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 129 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 188
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 189 IVVKFADTQKDK 200
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 10 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 69
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 70 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 116
>gi|345310083|ref|XP_001515840.2| PREDICTED: CUGBP, Elav-like family member 2 [Ornithorhynchus
anatinus]
Length = 426
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTASKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|73949074|ref|XP_849139.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Canis lupus
familiaris]
gi|338721615|ref|XP_003364409.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Equus
caballus]
Length = 484
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|301787201|ref|XP_002929016.1| PREDICTED: CUGBP Elav-like family member 2-like [Ailuropoda
melanoleuca]
Length = 488
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|189054263|dbj|BAG36783.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 28 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 80
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 81 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 139
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 140 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 199
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 200 IVVKFADTQKDK 211
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 21 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 80
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 81 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 127
>gi|410963195|ref|XP_003988151.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Felis catus]
Length = 484
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|440904320|gb|ELR54847.1| CUGBP Elav-like family member 2, partial [Bos grunniens mutus]
Length = 519
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 15 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 67
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 68 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 126
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 127 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 186
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 187 IVVKFADTQKDK 198
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 8 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 67
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 68 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 114
>gi|395539013|ref|XP_003771468.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Sarcophilus
harrisii]
Length = 540
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|351699026|gb|EHB01945.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 483
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 105/177 (59%), Gaps = 3/177 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G C V F + A A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAALEAQ 76
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +S++ ++ +I +FS +G IE
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISEKCTENDIRVMFSSFGQIE 135
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRGCAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 136 EYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 192
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 2 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
V F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 62 CSVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + TE DIR +F G + E + + G +G FV
Sbjct: 96 PADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIEEYRILRGP-DGLSRGCAFVT 154
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 155 FTTRGMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 191
>gi|67611128|ref|XP_667137.1| RNA binding protein [Cryptosporidium hominis TU502]
gi|54658240|gb|EAL36907.1| RNA binding protein [Cryptosporidium hominis]
Length = 903
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 16/193 (8%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PAP+ + KL+V VPR E+D+R LF+ +G V+ V + ++K TG +G V
Sbjct: 298 YPAPN------VEIKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALV 351
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH---------PVAPPDKLYVGC 187
+A A+R LN + + +KV+++ GE E P KL+VG
Sbjct: 352 TMESVAQADFALRELNSIKVLDELRGPLKVQYSTGEPERLGFESESCIPGVDQVKLFVGA 411
Query: 188 LSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFT 246
L + ++ EI E+FSPYG I +IFI+R+ +GCAFV+++ +E L AI L+G T
Sbjct: 412 LPRNITEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALT 471
Query: 247 MRGSDQPLVVRIA 259
+ ++P+ VR A
Sbjct: 472 LADVNRPIEVRFA 484
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A +++ VP ++ + LF GN++ L DK +G+ +G FV + A A+
Sbjct: 734 ANIFIFNVPYEWDKKSLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIHSAAEAVN 793
Query: 150 ALNGHYIFPGEQASIKVR 167
+NG G + + ++
Sbjct: 794 HMNGFITEQGRKLKVSIK 811
>gi|291232672|ref|XP_002736280.1| PREDICTED: bruno-2-like [Saccoglossus kowalevskii]
Length = 500
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 10/189 (5%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
P PD I K++V +PR+ E D+R EE G V ++ + +DK TGQ +G CFV
Sbjct: 26 QPDPDAI-------KMFVGQIPRSMDENDLREFLEEFGPVYQLNVLRDKVTGQSRGCCFV 78
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ PG I+++ AD E + KL+VG +SK+ ++ +
Sbjct: 79 TYYTRKAALQAQNALHNVKTMPGMHHRIQMKPADSENRNE---ERKLFVGMISKKCNEGD 135
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
I +F+P+G IE+ ++RD S+GCAF+ FS ++ AL AI + + TM G L V
Sbjct: 136 IRLMFAPFGSIEECTVLRDAQGVSKGCAFITFSSKQSALNAIQNKHQSVTMEGCSSSLQV 195
Query: 257 RIADPKKPR 265
R A+ K R
Sbjct: 196 RFAETVKER 204
>gi|327272094|ref|XP_003220821.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Anolis
carolinensis]
Length = 488
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|449480621|ref|XP_002190740.2| PREDICTED: CUGBP Elav-like family member 2 [Taeniopygia guttata]
Length = 490
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|348576693|ref|XP_003474121.1| PREDICTED: CUGBP Elav-like family member 4-like [Cavia porcellus]
Length = 477
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 2/176 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ T +
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLYCTRHSASVTTQVL 114
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+G PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G+IE+
Sbjct: 115 LHGAPSLPGMNRPIQVKPADSESRG--GKDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 172
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 173 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 228
>gi|327272096|ref|XP_003220822.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Anolis
carolinensis]
Length = 487
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 199
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 150
>gi|35903017|ref|NP_919382.1| CUGBP Elav-like family member 2 [Danio rerio]
gi|19909954|dbj|BAB87828.1| elav-type ribonucleoprotein-3 [Danio rerio]
Length = 486
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ G I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSPYG IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 MVVKFADTQKDK 192
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+KE++E+F PYG + I I+RD + QS+GC
Sbjct: 2 NGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDR 108
>gi|209879588|ref|XP_002141234.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556840|gb|EEA06885.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 517
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 83 INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFE 142
+++S P KL+V VP+ ED+ +F ++G V+E + +D + +G FV+F
Sbjct: 192 VDNSFTPVKLFVNRVPKWMRNEDLMKIFSKYGVVVECNIIRD--SNGPKGCAFVRFATIV 249
Query: 143 EAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCLSKQTSK 194
EA NAI ++G + E I+V++ADGE E PD K++VGCL K ++
Sbjct: 250 EAQNAILCIHGKTVLNEEAGPIQVKYADGEIERLGLSPDVQPCGESVKVFVGCLPKTCTE 309
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
E+ +F +GH++++ I+RD+ +QS+ AFV F R MA AI L+ + + +P+
Sbjct: 310 AELLTLFRRFGHVDEVHIIRDDNRQSKCSAFVTFPKRYMAENAIVFLDKKYILDNGKRPI 369
Query: 255 VVRIA 259
VR+A
Sbjct: 370 EVRLA 374
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS 239
P KL+V + K +++ ++FS YG + + I+RD +GCAFV+F+ A AI
Sbjct: 198 PVKLFVNRVPKWMRNEDLMKIFSKYGVVVECNIIRDS-NGPKGCAFVRFATIVEAQNAIL 256
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPRTG 267
++G + P+ V+ AD + R G
Sbjct: 257 CIHGKTVLNEEAGPIQVKYADGEIERLG 284
>gi|410908155|ref|XP_003967556.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 468
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 12/209 (5%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG M G + P PD I K++V +PR +E ++R LFE G V +
Sbjct: 22 DAINGSKMN--GSLEHLDQPDPDAI-------KMFVGQIPRAWSETELRELFEPFGAVHQ 72
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ T Q +G CFV F + A A AL+ G I+++ AD E+
Sbjct: 73 INILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSA 132
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ + EI +FS +G IE+ ++R QSRGCAFV F+ R MA
Sbjct: 133 V-EDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQN 191
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G PLVV++AD ++ +
Sbjct: 192 AIKTMHHSQTMEGCSSPLVVKLADTQRDK 220
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+ E+ E+F P+G + I I+RD QS+GC
Sbjct: 30 NGSLEHLDQPDPDAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGC 89
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 90 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDR 136
>gi|308465068|ref|XP_003094796.1| CRE-UNC-75 protein [Caenorhabditis remanei]
gi|308246879|gb|EFO90831.1| CRE-UNC-75 protein [Caenorhabditis remanei]
Length = 491
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
GF PD I KL+V +PR E+D+R LFE+ G + E + KDK TG +G
Sbjct: 20 GFPVKDPDAI-------KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGC 72
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDK-----LYVGCL 188
F+ F + A L+ PG +++V+ AD + P +P DK L++G L
Sbjct: 73 AFLTFCHRDSAQRCQTTLHDQKTLPGMNRAMQVKPADTD-SRPASPKDKADDKKLFIGML 131
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
SKQ S+ ++ +F+ +G ++++ ++R S+GCAFV++ A AIS L+G+ TM
Sbjct: 132 SKQQSEDDVRTLFAAFGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQTMP 191
Query: 249 GSDQPLVVRIADPKKPR 265
G+ LVV+ AD +K R
Sbjct: 192 GASSSLVVKYADTEKER 208
>gi|60729622|pir||JC7967 Napor protein - zebra fish
gi|14030309|gb|AAK52851.1|AF321194_1 Napor [Danio rerio]
Length = 441
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ G I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSPYG IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 MVVKFADTQKDK 192
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+KE++E+F PYG + I I+RD + QS+GC
Sbjct: 2 NGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDR 108
>gi|344284431|ref|XP_003413971.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Loxodonta africana]
Length = 499
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPG----EQASIKVRFADGEREH-----PVAPPD--------KLYVGCLSKQTS 193
L+ PG E + F R H P P KL+VG L KQ
Sbjct: 107 LHEQKTLPGPLPREAGTTSFNFTLASRIHQKRVRPNFYPTFWDSEEDRKLFVGMLGKQQG 166
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
++++ +F P+GHIE+ ++R S+GCAFV+F + A AAI GL+G+ TM G+
Sbjct: 167 EEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSS 226
Query: 254 LVVRIADPKKPRT 266
LVV++AD + R
Sbjct: 227 LVVKLADTDRERA 239
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G++ E + + G +G FVKF EA AI+
Sbjct: 155 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAFVKFGSQGEAQAAIQG 213
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 214 LHGSRTMAGASSSLVVKLADTDRERAL 240
>gi|221060510|ref|XP_002260900.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193810974|emb|CAQ42872.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 497
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 111/193 (57%), Gaps = 13/193 (6%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PAP IP KL+V+ VP+ TE DI+ +FEE+G++ +VV KDK+ + FV
Sbjct: 67 NPAP------SIPIKLFVSSVPKNLTENDIKSIFEEYGSIKDVVFIKDKKPNVNRANVFV 120
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------HPVAPPD-KLYVGCLS 189
+ A AI+ L+G + + V+FA GE E H + KL+VG L
Sbjct: 121 RMESIYYAQKAIQDLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLP 180
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
K+ ++++I +F+ YG++ +++I+++ S+ CAFV ++++E + AI LNG +
Sbjct: 181 KEIAEEQIRNLFNRYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIEN 240
Query: 250 SDQPLVVRIADPK 262
+++P+ VR A+ K
Sbjct: 241 AEKPIEVRFAETK 253
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ A +++ +P + D+ F GN+I + +K TG+ +G+ FV + + A NA
Sbjct: 386 VGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNVDSAINA 445
Query: 148 IRALNG 153
++ +NG
Sbjct: 446 VKYMNG 451
>gi|268561214|ref|XP_002646391.1| C. briggsae CBR-UNC-75 protein [Caenorhabditis briggsae]
Length = 550
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+R LFE+ G + E + KDK TG +G F+ F + A
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRCQTT 89
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDK-----LYVGCLSKQTSKKEIEEVFSPYG 205
L+ PG +++V+ AD + P +P DK L++G LSKQ S+ ++ +F+ +G
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTD-SRPASPKDKMDDKKLFIGMLSKQQSEDDVRTLFAAFG 148
Query: 206 HIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++++ ++R S+GCAFV++ A AIS L+G+ TM G+ LVV+ AD +K R
Sbjct: 149 ELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQTMPGASSSLVVKYADTEKER 208
>gi|389585865|dbj|GAB68595.1| RNA binding protein, partial [Plasmodium cynomolgi strain B]
Length = 508
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 112/193 (58%), Gaps = 13/193 (6%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PAP IP KL+V+ +P++ TE DI+ +FEE+G++ +VV KDK+ + FV
Sbjct: 78 NPAP------SIPIKLFVSSIPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFV 131
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------HPVAPPD-KLYVGCLS 189
+ A AI+ L+G + + V+FA GE E H + KL+VG L
Sbjct: 132 RMESIYYAQKAIQDLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLP 191
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
K+ ++++I +F+ YG++ +++I+++ S+ CAFV ++++E + AI LNG +
Sbjct: 192 KEIAEEQIRNLFNRYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIEN 251
Query: 250 SDQPLVVRIADPK 262
+++P+ VR A+ K
Sbjct: 252 AEKPIEVRFAETK 264
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ A +++ +P + D+ F GN+I + +K TG+ +G+ FV + + A NA
Sbjct: 397 VGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNVDSAINA 456
Query: 148 IRALNG 153
++ +NG
Sbjct: 457 VKYMNG 462
>gi|66269431|gb|AAY43160.1| napor protein long isoform [Danio rerio]
Length = 493
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 10/207 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG G + P PD I K++V +PR+ +E++++ LFE +G V ++
Sbjct: 26 INGTAGKMNGALEHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQIN 78
Query: 121 LPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVA 178
+ +D+ Q +G CFV F + A A AL+ G I+++ AD E+ + V
Sbjct: 79 ILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAV- 137
Query: 179 PPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAI 238
KL++G +SK+ ++ +I +FSPYG IE+ I+R SRGCAFV FS R MA AI
Sbjct: 138 EDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAI 197
Query: 239 SGLNGTFTMRGSDQPLVVRIADPKKPR 265
++ + TM G P+VV+ AD +K +
Sbjct: 198 KAMHQSQTMEGCSSPMVVKFADTQKDK 224
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHI 207
++G + GE+ + +G EH P PD K++VG + + S+KE++E+F PYG +
Sbjct: 15 VDGRLLSAGERINGTAGKMNGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAV 74
Query: 208 EDIFIVRDELK---QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
I I+RD + QS+GC FV F R+ AL A + L+ T+ G P+ ++ AD +K
Sbjct: 75 YQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKS 134
Query: 265 RTGELR 270
E R
Sbjct: 135 NAVEDR 140
>gi|55729085|emb|CAH91279.1| hypothetical protein [Pongo abelii]
Length = 360
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 116/215 (53%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G +VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSSIVVKFADTQKDK 216
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|66269429|gb|AAY43159.1| napor protein short isoform [Danio rerio]
Length = 473
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 41 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 93
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ G I+++ AD E+ + V KL++G +SK+ +
Sbjct: 94 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 152
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSPYG IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 153 ENDIRVMFSPYGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 212
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 213 MVVKFADTQKDK 224
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHI 207
++G + GE+ + +G EH P PD K++VG + + S+KE++E+F PYG +
Sbjct: 15 VDGRLLSAGERINGTAGKMNGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAV 74
Query: 208 EDIFIVRDELK---QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
I I+RD + QS+GC FV F R+ AL A + L+ T+ G P+ ++ AD +K
Sbjct: 75 YQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKS 134
Query: 265 RTGELR 270
E R
Sbjct: 135 NAVEDR 140
>gi|387916084|gb|AFK11651.1| CUGBP Elav-like family member 2 isoform 2 [Callorhinchus milii]
Length = 513
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
Query: 58 TDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVI 117
+D NG G + P PD I K++V +PR+ TE++++ LFE +G V
Sbjct: 21 SDRINGTNNKMNGALDHSDQPDPDAI-------KMFVGQIPRSWTEKELKELFEPYGAVH 73
Query: 118 EVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 74 QINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSN 133
Query: 176 PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMAL 235
V KL++G +SK+ ++ +I +FS +G IE+ I+R SRGCAFV FS R MA
Sbjct: 134 AV-EDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQ 192
Query: 236 AAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 193 NAIKAMHQSQTMEGCSSPIVVKFADTQKDK 222
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + ++KE++E+F PYG + I ++RD + QS+GC
Sbjct: 32 NGALDHSDQPDPDAIKMFVGQIPRSWTEKELKELFEPYGAVHQINVLRDRSQNPPQSKGC 91
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 92 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 138
>gi|410920283|ref|XP_003973613.1| PREDICTED: CUGBP Elav-like family member 4-like [Takifugu rubripes]
Length = 530
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D+RPLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 52 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQNA 111
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S+ ++ +F +G IE+
Sbjct: 112 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFESFGCIEEC 168
Query: 211 FIVRDELKQSRG------CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKP 264
I+R S+G C+ V+FS A AAIS L+G+ TM G+ LVV+ AD K
Sbjct: 169 TILRGPDGNSKGELGAASCSIVKFSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKE 228
Query: 265 RT 266
RT
Sbjct: 229 RT 230
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK--DKRTG 128
G N P P G KL+V + + +E+D+R LFE G + E + + D +
Sbjct: 120 GMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGCIEECTILRGPDGNSK 179
Query: 129 QQQGYC---FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+ G VKF+ EA AI AL+G PG +S+ V+FAD ++E +
Sbjct: 180 GELGAASCSIVKFSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTI 231
>gi|321461546|gb|EFX72577.1| hypothetical protein DAPPUDRAFT_326142 [Daphnia pulex]
Length = 229
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E D+RP+FEE G + E+ + KDK TG +G F+ + E A NA A
Sbjct: 37 KLFVGQIPRNLEEADLRPMFEEFGKIYELTVLKDKLTGMHKGCAFLTYCTRESAINAQNA 96
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD + KL+VG LSKQ + +++ ++F PYG IE+
Sbjct: 97 LHEKRTLPGMNRPIQVKPADSDNR---GEDRKLFVGMLSKQQTDEDVRQLFLPYGTIEEC 153
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
I+R QS+GCAFV+FS A AI+ L+G+ TM
Sbjct: 154 TILRGPDGQSKGCAFVKFSTHAEAQTAINSLHGSQTM 190
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P ++ G KL+V + + T+ED+R LF +G + E + + GQ
Sbjct: 105 GMNRPIQVKPADSDNRGEDRKLFVGMLSKQQTDEDVRQLFLPYGTIEECTILRGP-DGQS 163
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFP 158
+G FVKF+ EA AI +L+G P
Sbjct: 164 KGCAFVKFSTHAEAQTAINSLHGSQTMP 191
>gi|351708216|gb|EHB11135.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 513
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 161
Query: 209 DIFIVRDELKQSRG-CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ I+R SRG CAFV F+ R MA AI ++ TM G P+VV+ AD +K +
Sbjct: 162 ECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 219
>gi|363744095|ref|XP_003642971.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 496
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD 181
D+ + G F+ + E A A AL+ PG I+V+ AD E V
Sbjct: 86 DRAQLPLKSMGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGAVED-R 144
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L
Sbjct: 145 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINAL 204
Query: 242 NGTFTMRGSDQPLVVRIADPKKPRT 266
+G+ TM G+ LVV+ AD K RT
Sbjct: 205 HGSQTMPGASSSLVVKFADTDKERT 229
>gi|395827351|ref|XP_003786868.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Otolemur
garnettii]
Length = 514
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 116/215 (53%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTASKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FS +G IE+ I+R SRGCAFV FS
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|441603563|ref|XP_003262134.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Nomascus leucogenys]
Length = 458
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 8/183 (4%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E+A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCSFLSYCQREQA-KAHSD 113
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
++ + P I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 114 MHKQEVLPXMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 173
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 174 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 233
Query: 264 PRT 266
RT
Sbjct: 234 ERT 236
>gi|45383614|ref|NP_989591.1| CUGBP Elav-like family member 2 [Gallus gallus]
gi|31747199|gb|AAP57761.1| ELAV-type RNA-binding protein 3 variant 4 [Gallus gallus]
Length = 488
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K +V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K +VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|410908151|ref|XP_003967554.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 530
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 55 SEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHG 114
SE NG M G + P PD I K++V +PR +E ++R LFE G
Sbjct: 32 SEDLPMSNGSKMN--GSLEHLDQPDPDAI-------KMFVGQIPRAWSETELRELFEPFG 82
Query: 115 NVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGE 172
V ++ + +D+ T Q +G CFV F + A A AL+ G I+++ AD E
Sbjct: 83 AVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSE 142
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHRE 232
+ V KL++G +SK+ + EI +FS +G IE+ ++R QSRGCAFV F+ R
Sbjct: 143 KTSAV-EDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRA 201
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
MA AI ++ + TM G PLVV++AD ++ +
Sbjct: 202 MAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+ E+ E+F P+G + I I+RD QS+GC
Sbjct: 44 NGSLEHLDQPDPDAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDR 150
>gi|312068271|ref|XP_003137136.1| hypothetical protein LOAG_01549 [Loa loa]
gi|307767708|gb|EFO26942.1| hypothetical protein LOAG_01549 [Loa loa]
Length = 528
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 12/204 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD I K++V +PR+ E + R LFE+ G+V ++ + +DK T +G CFV
Sbjct: 17 PDPDAI-------KMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVT 69
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
+ +A A AL+ + P ++++ AD E + KL+VG L+K+ ++ +
Sbjct: 70 YYKRADAIAAQAALHNIRVLPQMYHPVQMKPADIENRNE----RKLFVGMLNKKLTEDSV 125
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
E+F+ +GHIED +++D +SRGCAFV F+HR A AI ++ + TM G +P+VV+
Sbjct: 126 REMFAQFGHIEDCTVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQTMEGCSKPIVVK 185
Query: 258 IADPKKPRTGELRGNY-AFGTPSF 280
AD +K + + G A TPS
Sbjct: 186 FADTQKEKDAKKSGGTPAVATPSL 209
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P+ T+ D+ F G++I + DK+T + + FV + A NAI AL
Sbjct: 429 LFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNLSKCFGFVSYDNVVSAQNAISAL 488
Query: 152 NGHYIFPGEQASIKVRFADGEREHP 176
NG I +KV+ G+ P
Sbjct: 489 NGFQI---GSKRLKVQLKRGKDNKP 510
>gi|126649123|ref|XP_001388078.1| RNA binding protein [Cryptosporidium parvum Iowa II]
gi|126117166|gb|EAZ51266.1| RNA binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 906
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PAP+ + KL+V VPR E+D+R LF+ +G V+ V + ++K TG +G V
Sbjct: 299 YPAPN------VEIKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALV 352
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH---------PVAPPDKLYVGC 187
+A A+R LN + + +KV+++ GE E P KL+VG
Sbjct: 353 TMESVAQADFALRELNSIKVLDELRGPLKVQYSTGEPERLGFESESCIPGVDQVKLFVGA 412
Query: 188 LSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFT 246
L + + EI E+FSPYG I +IFI+R+ +GCAFV+++ +E L AI L+G T
Sbjct: 413 LPRNIIEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALT 472
Query: 247 MRGSDQPLVVRIA 259
+ ++P+ VR A
Sbjct: 473 LADVNRPIEVRFA 485
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A +++ VP ++ + LF GN++ L DK +G+ +G FV + A A+
Sbjct: 735 ANIFIFNVPYEWDKKSLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIHSAAEAVN 794
Query: 150 ALNGHYIFPGEQASIKVR 167
+NG G + + ++
Sbjct: 795 HMNGFITEQGRKLKVSIK 812
>gi|47224440|emb|CAG08690.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%)
Query: 75 FNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQG 132
+ P PD I K++V +PR+ +E ++R LFE G V ++ + +D+ T Q +G
Sbjct: 10 LDQPDPDAI-------KMFVGQIPRSWSETELRELFEPFGAVHQINILRDRTTNPPQSKG 62
Query: 133 YCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQT 192
CFV F + A A AL+ G I+++ AD E+ V KL++G +SK+
Sbjct: 63 CCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAV-EDRKLFIGMVSKKY 121
Query: 193 SKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQ 252
+ EI +FS +G IE+ ++R QSRGCAFV F+ R MA AI ++ + TM G
Sbjct: 122 GENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSS 181
Query: 253 PLVVRIADPKKPR 265
PLVV++AD ++ +
Sbjct: 182 PLVVKLADTQRDK 194
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+ E+ E+F P+G + I I+RD QS+GC
Sbjct: 4 NGSLEHLDQPDPDAIKMFVGQIPRSWSETELRELFEPFGAVHQINILRDRTTNPPQSKGC 63
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 64 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDR 110
>gi|410908157|ref|XP_003967557.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Takifugu
rubripes]
Length = 482
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 55 SEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHG 114
SE NG M G + P PD I K++V +PR +E ++R LFE G
Sbjct: 32 SEDLPMSNGSKMN--GSLEHLDQPDPDAI-------KMFVGQIPRAWSETELRELFEPFG 82
Query: 115 NVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGE 172
V ++ + +D+ T Q +G CFV F + A A AL+ G I+++ AD E
Sbjct: 83 AVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSE 142
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHRE 232
+ V KL++G +SK+ + EI +FS +G IE+ ++R QSRGCAFV F+ R
Sbjct: 143 KTSAV-EDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRA 201
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
MA AI ++ + TM G PLVV++AD ++ +
Sbjct: 202 MAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+ E+ E+F P+G + I I+RD QS+GC
Sbjct: 44 NGSLEHLDQPDPDAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDR 150
>gi|152013390|sp|Q7T2T1.2|CELF2_CHICK RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|31747201|gb|AAP57762.1| ELAV-type RNA-binding protein 3 variant L [Gallus gallus]
Length = 484
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K +V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K +VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|410908161|ref|XP_003967559.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 6 [Takifugu
rubripes]
Length = 538
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 55 SEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHG 114
SE NG M G + P PD I K++V +PR +E ++R LFE G
Sbjct: 32 SEDLPMSNGSKMN--GSLEHLDQPDPDAI-------KMFVGQIPRAWSETELRELFEPFG 82
Query: 115 NVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGE 172
V ++ + +D+ T Q +G CFV F + A A AL+ G I+++ AD E
Sbjct: 83 AVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSE 142
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHRE 232
+ V KL++G +SK+ + EI +FS +G IE+ ++R QSRGCAFV F+ R
Sbjct: 143 KTSAV-EDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRA 201
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
MA AI ++ + TM G PLVV++AD ++ +
Sbjct: 202 MAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+ E+ E+F P+G + I I+RD QS+GC
Sbjct: 44 NGSLEHLDQPDPDAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDR 150
>gi|410908159|ref|XP_003967558.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 5 [Takifugu
rubripes]
Length = 490
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 55 SEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHG 114
SE NG M G + P PD I K++V +PR +E ++R LFE G
Sbjct: 32 SEDLPMSNGSKMN--GSLEHLDQPDPDAI-------KMFVGQIPRAWSETELRELFEPFG 82
Query: 115 NVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGE 172
V ++ + +D+ T Q +G CFV F + A A AL+ G I+++ AD E
Sbjct: 83 AVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSE 142
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHRE 232
+ V KL++G +SK+ + EI +FS +G IE+ ++R QSRGCAFV F+ R
Sbjct: 143 KTSAV-EDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRA 201
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
MA AI ++ + TM G PLVV++AD ++ +
Sbjct: 202 MAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+ E+ E+F P+G + I I+RD QS+GC
Sbjct: 44 NGSLEHLDQPDPDAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDR 150
>gi|393911007|gb|EJD76121.1| hypothetical protein, variant [Loa loa]
Length = 480
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 12/204 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD I K++V +PR+ E + R LFE+ G+V ++ + +DK T +G CFV
Sbjct: 17 PDPDAI-------KMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVT 69
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
+ +A A AL+ + P ++++ AD E + KL+VG L+K+ ++ +
Sbjct: 70 YYKRADAIAAQAALHNIRVLPQMYHPVQMKPADIENRNE----RKLFVGMLNKKLTEDSV 125
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
E+F+ +GHIED +++D +SRGCAFV F+HR A AI ++ + TM G +P+VV+
Sbjct: 126 REMFAQFGHIEDCTVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQTMEGCSKPIVVK 185
Query: 258 IADPKKPRTGELRGNY-AFGTPSF 280
AD +K + + G A TPS
Sbjct: 186 FADTQKEKDAKKSGGTPAVATPSL 209
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P+ T+ D+ F G++I + DK+T + + FV + A NAI AL
Sbjct: 381 LFIYHLPQDFTDNDLYTTFSPFGSIISAKVFIDKQTNLSKCFGFVSYDNVVSAQNAISAL 440
Query: 152 NGHYIFPGEQASIKVRFADGEREHP 176
NG I +KV+ G+ P
Sbjct: 441 NGFQI---GSKRLKVQLKRGKDNKP 462
>gi|410918520|ref|XP_003972733.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 501
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 57 PTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNV 116
P D NG G + P PD I K++V +PR+ +E++++ LFE +G V
Sbjct: 22 PGDRINGTAGKMNGALEHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAV 74
Query: 117 IEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
++ + +D+ Q +G CFV F + A A AL+ G I+++ AD E+
Sbjct: 75 YQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKS 134
Query: 175 HPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMA 234
+ V KL++G +SK+ ++ +I +FS +G IE+ I+R SRGCAFV FS R MA
Sbjct: 135 NAV-EDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMA 193
Query: 235 LAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 194 QNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 154 HYIFPGEQASIKVRFADGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG++ + +G EH P PD K++VG + + S+KE++E+F PYG + I
Sbjct: 18 RLLVPGDRINGTAGKMNGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQI 77
Query: 211 FIVRDELK---QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTG 267
I+RD + QS+GC FV F R+ AL A + L+ T+ G P+ ++ AD +K
Sbjct: 78 NILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAV 137
Query: 268 ELR 270
E R
Sbjct: 138 EDR 140
>gi|147905119|ref|NP_001080695.1| CUGBP Elav-like family member 3-B [Xenopus laevis]
gi|82241483|sp|Q7ZWM3.1|CEL3B_XENLA RecName: Full=CUGBP Elav-like family member 3-B; Short=CELF3-B;
AltName: Full=Bruno-like protein 1-B; AltName:
Full=CUG-BP- and ETR-3-like factor 3-B; AltName:
Full=ELAV-type RNA-binding protein 1-B; Short=ETR-1-B;
AltName: Full=RNA-binding protein BRUNOL-1-B; AltName:
Full=Trinucleotide repeat-containing gene 4 protein B
gi|28422663|gb|AAH46942.1| Tnrc4-prov protein [Xenopus laevis]
Length = 462
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ +F +G+I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRRMFETFGNIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE GN+ E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|410918516|ref|XP_003972731.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 521
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 57 PTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNV 116
P D NG G + P PD I K++V +PR+ +E++++ LFE +G V
Sbjct: 22 PGDRINGTAGKMNGALEHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAV 74
Query: 117 IEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
++ + +D+ Q +G CFV F + A A AL+ G I+++ AD E+
Sbjct: 75 YQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKS 134
Query: 175 HPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMA 234
+ V KL++G +SK+ ++ +I +FS +G IE+ I+R SRGCAFV FS R MA
Sbjct: 135 NAV-EDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMA 193
Query: 235 LAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 194 QNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 154 HYIFPGEQASIKVRFADGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG++ + +G EH P PD K++VG + + S+KE++E+F PYG + I
Sbjct: 18 RLLVPGDRINGTAGKMNGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQI 77
Query: 211 FIVRDELK---QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTG 267
I+RD + QS+GC FV F R+ AL A + L+ T+ G P+ ++ AD +K
Sbjct: 78 NILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAV 137
Query: 268 ELR 270
E R
Sbjct: 138 EDR 140
>gi|395827347|ref|XP_003786866.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Otolemur
garnettii]
Length = 521
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 59 DFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIE 118
D NG G + P PD I K++V +PR+ +E++++ LFE +G V +
Sbjct: 23 DRINGTASKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQ 75
Query: 119 VVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ + +D+ Q +G CFV F + A A AL+ PG I+++ AD E+ +
Sbjct: 76 INVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA 135
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FS +G IE+ I+R SRGCAFV FS R MA
Sbjct: 136 V-EDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 194
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 195 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 33 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 92
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 93 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 139
>gi|395827353|ref|XP_003786869.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Otolemur
garnettii]
Length = 488
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FS +G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|410908153|ref|XP_003967555.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 510
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 55 SEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHG 114
SE NG M G + P PD I K++V +PR +E ++R LFE G
Sbjct: 14 SEDLPMSNGSKMN--GSLEHLDQPDPDAI-------KMFVGQIPRAWSETELRELFEPFG 64
Query: 115 NVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGE 172
V ++ + +D+ T Q +G CFV F + A A AL+ G I+++ AD E
Sbjct: 65 AVHQINILRDRTTNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSE 124
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHRE 232
+ V KL++G +SK+ + EI +FS +G IE+ ++R QSRGCAFV F+ R
Sbjct: 125 KTSAV-EDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQSRGCAFVTFATRA 183
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
MA AI ++ + TM G PLVV++AD ++ +
Sbjct: 184 MAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 216
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+ E+ E+F P+G + I I+RD QS+GC
Sbjct: 26 NGSLEHLDQPDPDAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDR 132
>gi|410918518|ref|XP_003972732.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 474
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 57 PTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNV 116
P D NG G + P PD I K++V +PR+ +E++++ LFE +G V
Sbjct: 22 PGDRINGTAGKMNGALEHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAV 74
Query: 117 IEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
++ + +D+ Q +G CFV F + A A AL+ G I+++ AD E+
Sbjct: 75 YQINILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKS 134
Query: 175 HPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMA 234
+ V KL++G +SK+ ++ +I +FS +G IE+ I+R SRGCAFV FS R MA
Sbjct: 135 NAV-EDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMA 193
Query: 235 LAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 194 QNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 154 HYIFPGEQASIKVRFADGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG++ + +G EH P PD K++VG + + S+KE++E+F PYG + I
Sbjct: 18 RLLVPGDRINGTAGKMNGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQI 77
Query: 211 FIVRDELK---QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTG 267
I+RD + QS+GC FV F R+ AL A + L+ T+ G P+ ++ AD +K
Sbjct: 78 NILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAV 137
Query: 268 ELR 270
E R
Sbjct: 138 EDR 140
>gi|395827349|ref|XP_003786867.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Otolemur
garnettii]
Length = 490
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FS +G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 2 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 108
>gi|84999108|ref|XP_954275.1| ribonucleoprotein [Theileria annulata]
gi|65305273|emb|CAI73598.1| ribonucleoprotein, putative [Theileria annulata]
Length = 515
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 104/191 (54%), Gaps = 10/191 (5%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL+VA +P+T E D+R LFEE G V +V++ +DK + + FVK +A A
Sbjct: 115 VEIKLFVARIPKTHEESDLRRLFEEFGVVKDVIVIRDKTSNAHKNCAFVKMASICQADAA 174
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREH---------PVAPPDKLYVGCLSKQTSKKEIE 198
+R LN + ++++R+A GE E P KL+VG L K +++++
Sbjct: 175 VRRLNNQRVIDSSLGAVQIRYATGEVERLGFTQMAGEPGVDEAKLFVGSLPKSLTEEDLS 234
Query: 199 EVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+F +G ++F+++D ++GC FV+ ++E AL AI LNG + GS +PL VR
Sbjct: 235 SLFKEFGEAMEVFVLKDLACGGNKGCGFVKMKYKEQALHAIKELNGKKMLEGSVRPLEVR 294
Query: 258 IADPKKPRTGE 268
A K +G+
Sbjct: 295 FAMNKTGLSGQ 305
>gi|55730095|emb|CAH91772.1| hypothetical protein [Pongo abelii]
Length = 519
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 116/215 (53%), Gaps = 10/215 (4%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 10 MRNEELLLSNGTANKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKELFEP 62
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 63 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPAD 122
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV S
Sbjct: 123 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTSST 181
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
R MA AI ++ + TM G P+VV+ AD +K +
Sbjct: 182 RAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 26 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 85
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 86 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 132
>gi|357126724|ref|XP_003565037.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Brachypodium distachyon]
Length = 459
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 13/185 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE ++ +F E V EV + KDK T +G CF+ +EA AI A
Sbjct: 30 KLFVGQVPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINA 89
Query: 151 LNGHYIFPG--EQAS-------IKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
+ + PG E +S ++V++ADGE E KL++G L K E+ ++F
Sbjct: 90 YHNKHTLPGVCEHSSLVLASSPLQVKYADGELER---LEHKLFIGMLPKNVEDTELTDLF 146
Query: 202 SPYGHIEDIFIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
S YG+I+D+ I+R + S+ GCAF+++ +E A+AAI LNG + GS PLVV+ AD
Sbjct: 147 SEYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWAD 206
Query: 261 PKKPR 265
+K R
Sbjct: 207 TEKER 211
>gi|390344759|ref|XP_782270.3| PREDICTED: CUGBP Elav-like family member 1-A-like
[Strongylocentrotus purpuratus]
Length = 605
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 106/189 (56%), Gaps = 12/189 (6%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
P PD + K++V +P+ E+ +R +F E G V E+ + +DK+TG+ +G FV
Sbjct: 51 QPDPDSL-------KMFVGQIPKAYEEDKLREMFSEFGPVYELNVLRDKKTGESKGCAFV 103
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
F A A + L+ + PG + I+++ AD E E KL+VG LSK+ + +
Sbjct: 104 TFYSGVVADKAQKELHNRKVLPGMRHPIQMKPADCEVEE-----RKLFVGMLSKKCDESD 158
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ +FS +G IE+ I+RD++ +GCAFV ++ R+MAL I ++ + M G LVV
Sbjct: 159 VRIMFSAFGSIEECHILRDQMGGHKGCAFVTYATRQMALNCIRSMHQSRIMDGCTSKLVV 218
Query: 257 RIADPKKPR 265
+ AD +K +
Sbjct: 219 KFADTQKEK 227
>gi|431896648|gb|ELK06060.1| CUG-BP- and ETR-3-like factor 3 [Pteropus alecto]
Length = 419
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|401409201|ref|XP_003884049.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
gi|325118466|emb|CBZ54017.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
Length = 678
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+T E+ +RP+FE G+V EV + +DK T + + FVK A IRA
Sbjct: 131 KLFVGRVPQTVDEDALRPIFEGFGDVREVFVIRDKNTLKHKNSAFVKMASLAAADACIRA 190
Query: 151 LNGHYIFPGEQASIKVRFADGERE----HPVAPPD--------KLYVGCLSKQTSKKEIE 198
L+ + I I V++A GE E H + KL+VG + + S+ E+
Sbjct: 191 LHSNRILDAALGPIIVKYATGEAERLGMHSLGMGGEGGGVDQAKLFVGSIPRTMSEDELR 250
Query: 199 EVFSPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
F YG +E++F+++D + +GCAFV+F ++E L A+ LNG G +P+ VR
Sbjct: 251 VFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHIFEGCTRPVEVR 310
Query: 258 IADPKKPRTGELRGNY 273
A+ K R ++ G +
Sbjct: 311 FAESKSQRQQQMAGQH 326
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
AKL+V +PRT +E+++R F+ +G V EV + KD TG +G FVKF EE +A+R
Sbjct: 233 AKLFVGSIPRTMSEDELRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMR 292
Query: 150 ALNGHYIFPGEQASIKVRFAD 170
LNG +IF G ++VRFA+
Sbjct: 293 NLNGKHIFEGCTRPVEVRFAE 313
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A ++V +P T+ D+ F GN++ + DK + + +G+ FV + + A NA+
Sbjct: 440 ANVFVFHIPNEWTKADLIQTFSGFGNIVSCHIAVDKVSHRNRGFAFVSYDNVQSAANAVN 499
Query: 150 ALNGHYIFPGEQASIKVRFADGEREH 175
+NG + V GE H
Sbjct: 500 HMNGCLA---ANKRLNVSIKKGEEHH 522
>gi|340380143|ref|XP_003388583.1| PREDICTED: CUGBP Elav-like family member 4-like [Amphimedon
queenslandica]
Length = 494
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VP+ EED+RP E++G + E+++ + K T Q +G FV + E A A R
Sbjct: 59 VKLFVGQVPKHFEEEDLRPYLEQYGPIGELLILRHKATRQHKGCAFVTYLSRESAELAQR 118
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
L+ I P ++V A ++E K++VG LSK + + +F +GHIE+
Sbjct: 119 ELHDKVILPTMTRPLQVNAAGTKQEEL----RKVFVGMLSKTIDESHVRSMFERFGHIEE 174
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ +++D+ SRGCAF++FS R+ A +AI+ ++G+ M G+ PLVV+ AD ++ R
Sbjct: 175 LTVLKDKDGYSRGCAFIKFSSRQEAQSAINEMHGSEIMAGASNPLVVKYADTERER 230
>gi|440911412|gb|ELR61086.1| CUGBP Elav-like family member 4 [Bos grunniens mutus]
Length = 487
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + E A A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 151 LNGHYI-FPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFS 202
L+ G I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 115 LHADEKHLGGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFE 174
Query: 203 PYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPK 262
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD
Sbjct: 175 AFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTD 234
Query: 263 KPRT 266
K RT
Sbjct: 235 KERT 238
>gi|363744097|ref|XP_003642972.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 495
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 111/205 (54%), Gaps = 13/205 (6%)
Query: 70 GRKRGFNHPAPDHINDSGIPAK------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPK 123
G G NH +P N S IP K L++ +PR E+D++PLFEE G + E+ + K
Sbjct: 29 GHMNGLNH-SPG--NPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 85
Query: 124 DKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD 181
D+ + G F+ + E A A AL+ PG I+V+ AD E
Sbjct: 86 DRAQLPLKSMGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRG--GKDR 143
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG L+KQ S+ ++ +F +G+IE+ I+R S+GCAFV++S A AAI+ L
Sbjct: 144 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINAL 203
Query: 242 NGTFTMRGSDQPLVVRIADPKKPRT 266
+G+ TM G+ LVV+ AD K RT
Sbjct: 204 HGSQTMPGASSSLVVKFADTDKERT 228
>gi|71032751|ref|XP_766017.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352974|gb|EAN33734.1| RNA-binding protein, putative [Theileria parva]
Length = 539
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PAP + KL+VA +P+T E D+R LF+E G V +V++ +DK T + FVK
Sbjct: 131 PAP------AVDIKLFVARIPKTYEESDLRRLFQEFGPVKDVIVIRDKVTNSHKNCAFVK 184
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH---------PVAPPDKLYVGCL 188
+A A+R LN + ++++R+A GE E P KL+VG L
Sbjct: 185 MASICQADAAVRRLNNQRVIDSSLGAVQIRYATGEVERLGFTQMAGEPGMDEAKLFVGSL 244
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
K ++ ++ +F +G ++F+++D ++GC FV+ ++E AL AI LNG +
Sbjct: 245 PKSLTEDDLASLFKDFGEPLEVFVLKDLTCGGNKGCGFVKMKYKEQALYAIKELNGKKML 304
Query: 248 RGSDQPLVVRIADPKKPRTGE 268
GS +PL VR A K +G+
Sbjct: 305 EGSIRPLEVRFAMNKTGVSGQ 325
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 436 WSEHTCPDGNKYYYNCETCESRWDKPEEYL 465
W E+ PDG YYYN + ++W+ P+E+L
Sbjct: 381 WKEYISPDGRFYYYNIDNGTTQWEVPKEFL 410
>gi|218200205|gb|EEC82632.1| hypothetical protein OsI_27223 [Oryza sativa Indica Group]
gi|222637626|gb|EEE67758.1| hypothetical protein OsJ_25469 [Oryza sativa Japonica Group]
Length = 497
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
Query: 85 DSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEA 144
D G +L+V VPR+ EEDI + + + +D+ TG +G CFV + EEA
Sbjct: 7 DGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEA 66
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
AI A + PG +++V++ADGE E +A KL++G L + + E+ +FS Y
Sbjct: 67 DKAIAAYHNKCTLPGASRAMQVKYADGELER-LAAEQKLFIGMLPRDVKENEVSALFSQY 125
Query: 205 GHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGT-FTMRGSDQPLVVRIADPKK 263
G+I + ++R K + CA ++F +E A AAI LNGT GS LVV++AD ++
Sbjct: 126 GNIRQLKVLRSPQKTRKACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTER 185
Query: 264 PR 265
+
Sbjct: 186 EK 187
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L+V +P+ +ED+ LF+E G ++ + D+ TG + + FV + A AIR
Sbjct: 418 ANLFVYDIPQEYGDEDLANLFQEFGRILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIR 477
Query: 150 ALNGHYI 156
+NG I
Sbjct: 478 RMNGSQI 484
>gi|148706791|gb|EDL38738.1| trinucleotide repeat containing 4, isoform CRA_d [Mus musculus]
Length = 538
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 81 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 140
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 141 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 196
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 197 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 251
>gi|148706790|gb|EDL38737.1| trinucleotide repeat containing 4, isoform CRA_c [Mus musculus]
Length = 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 81 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 140
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 141 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 197
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 198 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 252
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 149 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 207
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 208 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 251
>gi|83273948|ref|XP_729621.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23487965|gb|EAA21186.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana-related
[Plasmodium yoelii yoelii]
Length = 507
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 13/193 (6%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PAP IP KL+V+ +P+ TE+DI+ +FEE+G +VV KDK+ + FV
Sbjct: 71 NPAP------SIPVKLFVSSIPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFV 124
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH-------PVAPPDKLYVGCLS 189
+ A AI L+G I + V+FA GE E KL+VG L
Sbjct: 125 RMESIYFAQKAIEDLHGKKIICESLGPLIVKFAIGELEKYGINMNNANENEAKLFVGSLP 184
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
K + +I +F+ YG++++++I+++ S+ CAFV + ++E + A+ LNG +
Sbjct: 185 KDITDDQIRNIFNRYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAIEN 244
Query: 250 SDQPLVVRIADPK 262
+++P+ VR A K
Sbjct: 245 AEKPIEVRFAQSK 257
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ A +++ +P + D+ F GN+I + +K TG+ +G+ FV + + A NA
Sbjct: 396 VGANIFIFHIPNEWIQNDLLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNVDSAINA 455
Query: 148 IRALNG 153
++ +NG
Sbjct: 456 VKYMNG 461
>gi|338725075|ref|XP_003365078.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Equus
caballus]
gi|426331469|ref|XP_004026703.1| PREDICTED: CUGBP Elav-like family member 3 isoform 4 [Gorilla
gorilla gorilla]
gi|355758212|gb|EHH61449.1| hypothetical protein EGM_19912 [Macaca fascicularis]
Length = 419
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|351702706|gb|EHB05625.1| CUG-BP- and ETR-3-like factor 3 [Heterocephalus glaber]
Length = 381
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|71297206|gb|AAH52491.1| Trinucleotide repeat containing 4 [Homo sapiens]
Length = 464
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAKAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAKAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|403302658|ref|XP_003941971.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403302660|ref|XP_003941972.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 464
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSENR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P + G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|344246977|gb|EGW03081.1| CUG-BP- and ETR-3-like factor 3 [Cricetulus griseus]
Length = 447
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|35505365|gb|AAH57553.1| Tnrc4 protein [Mus musculus]
Length = 494
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|444515071|gb|ELV10733.1| CUGBP Elav-like family member 3 [Tupaia chinensis]
Length = 431
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HP PD N +++ +P+ T+ +I +F G+VI + D+ T Q + + FV
Sbjct: 340 HPGPDGCN-------IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFV 392
Query: 137 KFTIFEEAGNAIRALNGHYI 156
F A AI+A+NG I
Sbjct: 393 SFDNPASAQAAIQAMNGFQI 412
>gi|395535951|ref|XP_003769984.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Sarcophilus
harrisii]
Length = 458
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSENR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P + G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|440792905|gb|ELR14112.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 458
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 17/187 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +P++ TE I PLF GN++EV + +++ TG+ +G FV + + A AI
Sbjct: 105 KLFIGQLPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIET 164
Query: 151 LNGHYIFPGEQASIKVRFA-----DGEREHPVAPPD------------KLYVGCLSKQTS 193
L+ PG + I+V++A D R P PD KL++G L +
Sbjct: 165 LHNKQTLPGMTSPIQVKYAHGGGGDAPRYTPAPVPDYGMPGMDNMTEFKLFIGMLPRTVG 224
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ + +F PYG I ++ ++R+ SRGCAFV++ RE A+ AI+ NG +G P
Sbjct: 225 EDGLRAIFQPYGSIIEVVVLREPDGSSRGCAFVKYHRREDAVNAINACNGQMFFQGQTNP 284
Query: 254 LVVRIAD 260
L V+ AD
Sbjct: 285 LTVKFAD 291
>gi|402592937|gb|EJW86864.1| ELAV-type RNA binding protein variant B [Wuchereria bancrofti]
Length = 509
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 110/188 (58%), Gaps = 11/188 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD I K++V +PR+ E + R LFE+ G+V ++ + +DK T +G CFV
Sbjct: 17 PDPDAI-------KMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVT 69
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
+ +A A AL+ + P ++++ AD E + KL+VG L+K+ ++ ++
Sbjct: 70 YYKRADAIAAQAALHNIRVLPQMYHPVQMKPADIENRNE----RKLFVGMLNKKLTEDDV 125
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
E+F+ +GHIED +++D +SRGCAFV F+HR A AI ++ + TM G +P+VV+
Sbjct: 126 REMFAQFGHIEDCTVLKDSEGKSRGCAFVTFAHRSCAQQAIKQVHLSQTMEGCSKPIVVK 185
Query: 258 IADPKKPR 265
AD +K +
Sbjct: 186 FADTQKEK 193
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 50 YDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPL 109
Y Q+++ + P + G PD N L++ +P+ T+ D+
Sbjct: 375 YPQLATNNLLTASSTPNTGMNTTSGGQSKGPDGCN-------LFIYHLPQDFTDNDLYTT 427
Query: 110 FEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFA 169
F G++I + DK+T + + FV + A NAI ALNG I +KV+
Sbjct: 428 FSPFGSIISAKVFIDKQTNLSKCFGFVSYDNVVSAQNAISALNGFQI---GSKRLKVQLK 484
Query: 170 DGEREHP 176
G+ P
Sbjct: 485 RGKDSKP 491
>gi|354503687|ref|XP_003513912.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Cricetulus
griseus]
Length = 462
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 178
>gi|27369577|ref|NP_766022.1| CUGBP Elav-like family member 3 [Mus musculus]
gi|81914478|sp|Q8CIN6.1|CELF3_MOUSE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|25807803|gb|AAN73885.1| CUG-BP and ETR-3 like factor 3 [Mus musculus]
Length = 465
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 178
>gi|395535953|ref|XP_003769985.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Sarcophilus
harrisii]
Length = 408
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSENR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P + G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|149030745|gb|EDL85782.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 284
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI L+ PG +S+ V+FAD E+E +
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGL 181
>gi|380792869|gb|AFE68310.1| CUGBP Elav-like family member 3 isoform 1, partial [Macaca mulatta]
Length = 368
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPD-GTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|334324674|ref|XP_003340553.1| PREDICTED: CUGBP, Elav-like family member 3 [Monodelphis domestica]
Length = 408
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSENR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P + G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|301767880|ref|XP_002919375.1| PREDICTED: CUGBP Elav-like family member 3-like [Ailuropoda
melanoleuca]
Length = 461
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
HP PD N +++ +P+ T+ +I +F G+VI + D+ T Q + + FV
Sbjct: 370 HPGPDGCN-------IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFV 422
Query: 137 KFTIFEEAGNAIRALNGHYI 156
F A AI+A+NG I
Sbjct: 423 SFDNPASAQAAIQAMNGFQI 442
>gi|226492020|ref|NP_001152526.1| LOC100286166 [Zea mays]
gi|195657131|gb|ACG48033.1| RNA binding protein [Zea mays]
Length = 463
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ E D+ LF E V EV + KDK T +G CFV EEA A+ A
Sbjct: 31 KLFVGQVPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVNA 90
Query: 151 LNGHYIFPG----------EQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
+ G + ++V++ADGE E KL++G L K + E+ ++
Sbjct: 91 YHNKQTLSGVCEHTTNLVLASSPLQVKYADGELERL---EHKLFIGMLPKNVTDTELTDL 147
Query: 201 FSPYGHIEDIFIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
FS YG++ D+ I+R + ++ GCAF+++ ++ ALAAI LNG + GS PLVV+ A
Sbjct: 148 FSKYGNVTDLQILRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWA 207
Query: 260 DPKKPR 265
D +K R
Sbjct: 208 DTEKER 213
>gi|219520290|gb|AAI43227.1| TNRC4 protein [Homo sapiens]
Length = 464
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGD----RKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 178
>gi|359321739|ref|XP_003639689.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Canis
lupus familiaris]
Length = 462
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|68069003|ref|XP_676412.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496097|emb|CAH95360.1| conserved hypothetical protein [Plasmodium berghei]
Length = 506
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 13/193 (6%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PAP IP KL+V+ +P+ TE+DI+ +FEE+G +VV KDK+ + FV
Sbjct: 71 NPAP------SIPVKLFVSSIPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFV 124
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH-------PVAPPDKLYVGCLS 189
+ A AI L+G I + V+FA GE E KL+VG L
Sbjct: 125 RMESIYFAQKAIEDLHGKKIICESLGPLIVKFAIGELEKYGINMNNANENEAKLFVGSLP 184
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
K + +I +F+ YG++++++I+++ S+ CAFV + ++E + A+ LNG +
Sbjct: 185 KDITDDQIRNIFNRYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAIEN 244
Query: 250 SDQPLVVRIADPK 262
+++P+ VR A K
Sbjct: 245 AEKPIEVRFAQSK 257
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 71 RKRGFNHPAPDHINDSG-IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQ 129
RK + P ++N+ G + A +++ +P + D+ F GN+I + +K TG+
Sbjct: 377 RKMDQDFINPLNMNEVGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAYIATEKDTGR 436
Query: 130 QQGYCFVKFTIFEEAGNAIRALNG 153
+G+ FV + + A NA++ +NG
Sbjct: 437 NRGFAFVSYDNVDSAINAVKYMNG 460
>gi|71164894|ref|NP_009116.3| CUGBP Elav-like family member 3 isoform 1 [Homo sapiens]
gi|149751259|ref|XP_001492746.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Equus
caballus]
gi|74756184|sp|Q5SZQ8.1|CELF3_HUMAN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName: Full=CAG
repeat protein 4; AltName: Full=CUG-BP- and ETR-3-like
factor 3; AltName: Full=ELAV-type RNA-binding protein 1;
Short=ETR-1; AltName: Full=Expanded repeat domain
protein CAG/CTG 4; AltName: Full=RNA-binding protein
BRUNOL-1; AltName: Full=Trinucleotide repeat-containing
gene 4 protein
gi|85397642|gb|AAI04759.1| Trinucleotide repeat containing 4 [Homo sapiens]
gi|119573806|gb|EAW53421.1| trinucleotide repeat containing 4, isoform CRA_c [Homo sapiens]
gi|168278104|dbj|BAG11030.1| trinucleotide repeat-containing 4 protein [synthetic construct]
Length = 465
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|355558428|gb|EHH15208.1| hypothetical protein EGK_01267 [Macaca mulatta]
Length = 469
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|348586638|ref|XP_003479075.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Cavia
porcellus]
Length = 463
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|350583381|ref|XP_003481499.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Sus scrofa]
gi|397492758|ref|XP_003817287.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Pan paniscus]
gi|426331463|ref|XP_004026700.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gorilla
gorilla gorilla]
Length = 464
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|284005526|ref|NP_001164779.1| CUGBP Elav-like family member 3 [Oryctolagus cuniculus]
gi|217030863|gb|ACJ74025.1| trinucleotide repeat containing 4 (predicted) [Oryctolagus
cuniculus]
Length = 466
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|281182934|ref|NP_001162429.1| CUGBP Elav-like family member 3 [Papio anubis]
gi|163781027|gb|ABY40803.1| trinucleotide repeat containing 4 (predicted) [Papio anubis]
Length = 471
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|126313728|ref|XP_001366642.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Monodelphis
domestica]
Length = 458
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSENR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P + G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|157821951|ref|NP_001102660.1| CUG-BP- and ETR-3-like factor 3 [Rattus norvegicus]
gi|149030747|gb|EDL85784.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 473
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|296228815|ref|XP_002759970.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Callithrix
jacchus]
Length = 465
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSENR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P + G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|444516747|gb|ELV11280.1| Poly [ADP-ribose] polymerase 6 [Tupaia chinensis]
Length = 972
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+G I++
Sbjct: 68 LHEQKTLPGMSRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGQIQEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
++R SRGCAFV+F + AL GL+G+ TM G+ LVV++AD + R
Sbjct: 125 TVLRSPDGTSRGCAFVKFGSQGEAL---QGLHGSRTMAGASSSLVVKLADTDRERA 177
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + EED+R LF+ G + E + + G +G FVKF G A++
Sbjct: 96 KLFVGMLGKQQGEEDVRRLFQPFGQIQECTVLRSP-DGTSRGCAFVKFG---SQGEALQG 151
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G G +S+ V+ AD +RE +
Sbjct: 152 LHGSRTMAGASSSLVVKLADTDRERAL 178
>gi|116003913|ref|NP_001070313.1| CUGBP Elav-like family member 3 [Bos taurus]
gi|122132428|sp|Q08E07.1|CELF3_BOVIN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|115305254|gb|AAI23481.1| Trinucleotide repeat containing 4 [Bos taurus]
gi|296489556|tpg|DAA31669.1| TPA: CUG-BP- and ETR-3-like factor 3 [Bos taurus]
Length = 461
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|395855962|ref|XP_003800412.1| PREDICTED: CUGBP Elav-like family member 3 [Otolemur garnettii]
Length = 475
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|410033642|ref|XP_524868.3| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Pan
troglodytes]
Length = 414
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|148706793|gb|EDL38740.1| trinucleotide repeat containing 4, isoform CRA_f [Mus musculus]
Length = 466
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|410968366|ref|XP_003990678.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Felis catus]
Length = 463
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|354503685|ref|XP_003513911.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Cricetulus
griseus]
Length = 491
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|237832459|ref|XP_002365527.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|211963191|gb|EEA98386.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|221487976|gb|EEE26190.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
gi|221508501|gb|EEE34070.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 648
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 31/254 (12%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL+V VP T EE +RP+FE G V EV + +DK T + + FVK A
Sbjct: 100 VEIKLFVGRVPHTVDEEALRPIFESFGEVREVFVIRDKSTLKHRNSAFVKMASLAAADAC 159
Query: 148 IRALNGHYIFPGEQASIKVRFADGERE----HPVAPPD--------KLYVGCLSKQTSKK 195
IRAL+ + + I V++A GE E H + KL+VG + + S+
Sbjct: 160 IRALHSNRVLDAALGPIIVKYATGEAERLGMHSLGMGGEGGGVDQAKLFVGSIPRTMSED 219
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
E+ F YG +E++F+++D + +GCAFV+F ++E L A+ LNG +P+
Sbjct: 220 ELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHVFDECTRPV 279
Query: 255 VVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAGG---QILPNVSYRPQ 311
VR A+ K R ++ G G +FG LG AGG Q L +
Sbjct: 280 EVRFAESKSQRQQQMAG----GQHNFG-----------GLGTWAGGVVAQGLSGMGRNAS 324
Query: 312 HIFNNSHPQVFSNW 325
+ +NS+P+ W
Sbjct: 325 ALGSNSNPRQAGQW 338
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A ++V +P T+ D+ F GN++ + DK + + +G+ FV + + A NA+
Sbjct: 408 ANVFVFHIPNEWTKADLVQTFSGFGNIVSCHIAVDKASHRNRGFAFVSYDNIQSAANAVN 467
Query: 150 ALNGHYIFPGEQASIKVRFADGEREH 175
+NG + + V GE H
Sbjct: 468 HMNGCLV---ANKRLNVSIKKGEEHH 490
>gi|332220299|ref|XP_003259294.1| PREDICTED: CUGBP Elav-like family member 3 [Nomascus leucogenys]
Length = 467
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|344275414|ref|XP_003409507.1| PREDICTED: CUGBP Elav-like family member 3 [Loxodonta africana]
Length = 420
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|13537210|dbj|BAB40781.1| HrETR-1 [Halocynthia roretzi]
Length = 594
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 15/196 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ VP+ TE ++RP+FE +G + E+ + DK TG +G F+ + A NA
Sbjct: 104 KLFIGQVPKNWTEHELRPIFEPYGEIYELSVLHDKYTGMHKGCAFLTYCKKTPAINAQNF 163
Query: 151 LNGHYIFPGEQASIKVRFAD----GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGH 206
L+ PG ++V+ AD GE KL+VG L K+ ++++I ++F +GH
Sbjct: 164 LHEQKTLPGMNHPMQVKPADTVNKGEDR-------KLFVGMLGKRQTEEDIRQLFEKFGH 216
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
IE+ I+R QS+GC+FV+ S A AAI L+G+ TM G+ +VV++AD K R
Sbjct: 217 IEECTILRTPDGQSKGCSFVKLSTSTGARAAIDALHGSQTMPGASSSIVVKLADTDKERA 276
Query: 267 ----GELRGNYAFGTP 278
++ NY +P
Sbjct: 277 IRKMQQMAQNYGLVSP 292
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G NHP P + G KL+V + + TEEDIR LFE+ G++ E + + GQ
Sbjct: 172 GMNHPMQVKPADTVNKGEDRKLFVGMLGKRQTEEDIRQLFEKFGHIEECTILRTPD-GQS 230
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVK + A AI AL+G PG +SI V+ AD ++E +
Sbjct: 231 KGCSFVKLSTSTGARAAIDALHGSQTMPGASSSIVVKLADTDKERAI 277
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 79 APDHINDSGIPAK-------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
AP +N P K L++ +P+ T+ D+ +F+ GNVI + D+ T Q +
Sbjct: 491 APALVNSPTAPQKEGPEGCNLFIYHLPQEFTDADLANVFQPFGNVISAKVFIDRATNQSK 550
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYI 156
+ FV + A AI+ +NG I
Sbjct: 551 CFGFVSYDNPVSAQTAIQTMNGFQI 575
>gi|183637597|gb|ACC64599.1| trinucleotide repeat containing 4 (predicted) [Rhinolophus
ferrumequinum]
Length = 459
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|449668124|ref|XP_002167931.2| PREDICTED: CUGBP Elav-like family member 2-like [Hydra
magnipapillata]
Length = 511
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 108/191 (56%), Gaps = 6/191 (3%)
Query: 75 FNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC 134
NH +H+ KL++ VPR TE+++RP+ E +G + E+ + DK TGQ +G
Sbjct: 9 LNH---NHVGREPEACKLFIGQVPRNWTEKELRPILEPYGEIHELSILYDKYTGQHKGCA 65
Query: 135 FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSK 194
F+ F E A L+ PG ++V+ A+ E + KL++G LSK+ ++
Sbjct: 66 FLVFYEKEAANRCQNELHEKRTLPGSVNKMQVKPAESEIK---TEDRKLFIGMLSKKLNE 122
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++ +FSPYG IE++ I+R+ S+GCAF+++S R A AI ++ + TM P+
Sbjct: 123 DDLRIMFSPYGTIEELTILRNPDGGSKGCAFIKYSTRLQAQNAIKAMHNSQTMENCSSPV 182
Query: 255 VVRIADPKKPR 265
VV+IAD ++ +
Sbjct: 183 VVKIADTEREK 193
>gi|25807801|gb|AAN73884.1| CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 465
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|12746392|gb|AAK07474.1|AF329264_1 CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 462
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|359321741|ref|XP_003639690.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Canis
lupus familiaris]
Length = 412
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|350583383|ref|XP_003481500.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Sus scrofa]
gi|397492760|ref|XP_003817288.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Pan paniscus]
gi|426331465|ref|XP_004026701.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gorilla
gorilla gorilla]
Length = 414
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|348586640|ref|XP_003479076.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Cavia
porcellus]
gi|410968368|ref|XP_003990679.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Felis catus]
Length = 413
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|289547605|ref|NP_001166120.1| CUGBP Elav-like family member 3 isoform 3 [Homo sapiens]
gi|338725073|ref|XP_003365077.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Equus
caballus]
gi|119573807|gb|EAW53422.1| trinucleotide repeat containing 4, isoform CRA_d [Homo sapiens]
Length = 415
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 178
>gi|441625924|ref|XP_003257673.2| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Nomascus
leucogenys]
Length = 523
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 13/195 (6%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 45 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 156
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRG---CAFVQFSHREMALAAISGLNGTFTMRGS 250
+ +I +FSP+G IE+ I+R SRG CAFV FS R MA AI ++ + TM G
Sbjct: 157 ENDIRVMFSPFGQIEECRILRGPDGLSRGNSSCAFVTFSTRAMAQNAIKAMHQSQTMEGC 216
Query: 251 DQPLVVRIADPKKPR 265
P+VV+ AD +K +
Sbjct: 217 SSPIVVKFADTQKDK 231
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD + QS+GC
Sbjct: 38 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGC 97
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 98 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDR 144
>gi|167521936|ref|XP_001745306.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776264|gb|EDQ89884.1| predicted protein [Monosiga brevicollis MX1]
Length = 389
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR +EED+ +F E G++ EV++ +D++T +G F+ FT + A +AI
Sbjct: 18 KLFIGQIPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAAVDAIER 77
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ P ++V+ AD ++ + KL+VG L++ ++ ++ F +GH+ED+
Sbjct: 78 HHEKTTLPNMSHPMQVKIADTDQRNA---ERKLFVGMLARTMNEDDLRAKFGAFGHVEDL 134
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
I+R S+GCAFV+FS+ + A +AI+ L+ + TM G P+VV++AD +K
Sbjct: 135 TILRHADGSSKGCAFVKFSNADEAQSAIANLHHSETMDGCRSPIVVKVADNEK 187
>gi|426218925|ref|XP_004003685.1| PREDICTED: CUGBP Elav-like family member 3 [Ovis aries]
Length = 449
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|348521218|ref|XP_003448123.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 483
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 109/192 (56%), Gaps = 10/192 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGY 133
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q +G
Sbjct: 9 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ G I+++ AD E+ + V KL++G +SK+ +
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 120
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FS +G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 121 ENDIRVMFSAFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 181 IVVKFADTQKDK 192
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+KE++E+F PYG + I I+RD + QS+GC
Sbjct: 2 NGALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGC 61
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 62 CFVTFYTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDR 108
>gi|195035649|ref|XP_001989288.1| GH11645 [Drosophila grimshawi]
gi|193905288|gb|EDW04155.1| GH11645 [Drosophila grimshawi]
Length = 791
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 114/204 (55%), Gaps = 11/204 (5%)
Query: 62 NGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVL 121
N +P + + + P D+I K++V +P+T E +R LFE+ G V + +
Sbjct: 292 NAMDIPQVDAELAKDQPDADNI-------KMFVGQIPKTWDEIKLRCLFEQFGRVHTLNV 344
Query: 122 PKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD 181
+DK T +G CFV + + A A AL+ G I+++ AD E +
Sbjct: 345 LRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENRNE----R 400
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG L+K+ ++ ++ ++F+ +G IE+ ++RD++ QS+GCAFV F+ ++ A+ AI L
Sbjct: 401 KLFVGMLNKKYTEADVRQLFAGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKSL 460
Query: 242 NGTFTMRGSDQPLVVRIADPKKPR 265
+ + TM G PLVV+ AD +K +
Sbjct: 461 HQSQTMEGCSAPLVVKFADTQKEK 484
>gi|390338611|ref|XP_781047.3| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 520
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 104/175 (59%), Gaps = 8/175 (4%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D+RP+FE+ G + E+ + +D+ TG +G F+ + E A A +A
Sbjct: 49 KLFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRAQKA 108
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG +++V+ AD E KL+VG L+K +++E+ +F+ +G I++
Sbjct: 109 LHEQKTLPGMTRALQVKPADSESR---GEDRKLFVGMLNKAQTEEEVRAMFTHFGKIDEC 165
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I++D SRGCAFV+FS R+ A+ AI+ +N ++ LVV+ AD +K R
Sbjct: 166 TILKDPNGISRGCAFVKFSTRKEAVGAINSIN-----MSANPNLVVKFADTEKER 215
>gi|348513017|ref|XP_003444039.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 531
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 62 NGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVL 121
NG G + P PD I K++V +PR+ +E +++ LFE G V ++ +
Sbjct: 39 NGSSSKMNGSLEHLDQPDPDSI-------KMFVGQIPRSWSETELKELFEPFGAVHQINI 91
Query: 122 PKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAP 179
+D+ Q +G CFV F + A A AL+ G I+++ AD E+ V
Sbjct: 92 LRDRTQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAV-E 150
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS 239
KL+VG +SK+ + E+ +FS +G IE+ I+R QSRGCAFV F+ R MA AI
Sbjct: 151 DRKLFVGMVSKKYGENEVRMMFSSFGQIEECRILRGPDGQSRGCAFVTFATRAMAQNAIK 210
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPR 265
++ + TM G PLVV+ AD ++ +
Sbjct: 211 TMHHSQTMEGCSSPLVVKFADTQRDK 236
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + S+ E++E+F P+G + I I+RD + QS+GC
Sbjct: 46 NGSLEHLDQPDPDSIKMFVGQIPRSWSETELKELFEPFGAVHQINILRDRTQNPPQSKGC 105
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 106 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDR 152
>gi|294936191|ref|XP_002781649.1| Nuclear polyadenylated RNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239892571|gb|EER13444.1| Nuclear polyadenylated RNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 451
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 103/185 (55%), Gaps = 7/185 (3%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC-FVKFTIFEEAGN 146
IP +L+V +P T E++IR LFE +G V EV + + K G+QQ C FVKF EA
Sbjct: 7 IPVRLFVGRLPATWQEQNIRDLFEAYGEVQEVGMIRPKDNGKQQTGCAFVKFGAVHEAAT 66
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD------KLYVGCLSKQTSKKEIEEV 200
AI++LNG Y I+V+FA+GE E P D KL+VG + T+ +E++ +
Sbjct: 67 AIKSLNGTYKADDVCGFIQVQFANGEPERLGLPEDTEGYSQKLFVGNIPPSTTDEELKRI 126
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F YG++ + + + + AFV++S + A+ AI LN +T G P+ V+ AD
Sbjct: 127 FDEYGNVTEAYGLESKRASGNKAAFVRYSKKSDAVKAIEALNEKYTFPGEPHPITVKCAD 186
Query: 261 PKKPR 265
++ R
Sbjct: 187 TREQR 191
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 87 GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
G KL+V +P + T+E+++ +F+E+GNV E + KR + FV+++ +A
Sbjct: 104 GYSQKLFVGNIPPSTTDEELKRIFDEYGNVTEAYGLESKRASGNKA-AFVRYSKKSDAVK 162
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVA 178
AI ALN Y FPGE I V+ AD RE +A
Sbjct: 163 AIEALNEKYTFPGEPHPITVKCAD-TREQRLA 193
>gi|363742943|ref|XP_003642748.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gallus
gallus]
Length = 464
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG LSKQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKE 178
>gi|426230734|ref|XP_004009417.1| PREDICTED: CUGBP Elav-like family member 5 [Ovis aries]
Length = 579
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 18/239 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFE+ G + E+ + KD TG +G F+ + + A A A
Sbjct: 71 KLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTA 130
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L+KQ S++++ +F P+G I++
Sbjct: 131 LHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 188
Query: 211 FIVRDELKQ-----SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R + GCAFV+FS A AAI L+G+ TM G+ LVV+ AD K R
Sbjct: 189 TVLRGPRRARWGGWGAGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKER 248
Query: 266 TG----ELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSYRPQHI 313
T ++ G TPS F ++ + +++G + P V++ P HI
Sbjct: 249 TLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHI 307
>gi|195435047|ref|XP_002065513.1| GK15493 [Drosophila willistoni]
gi|194161598|gb|EDW76499.1| GK15493 [Drosophila willistoni]
Length = 866
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 370 GEKEPDPDNI-------KMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGC 422
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 423 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 478
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 479 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 538
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 539 PLVVKFADTQKEK 551
>gi|363742941|ref|XP_428898.3| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gallus
gallus]
Length = 401
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG LSKQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKE 178
>gi|195388108|ref|XP_002052732.1| GJ17718 [Drosophila virilis]
gi|194149189|gb|EDW64887.1| GJ17718 [Drosophila virilis]
Length = 738
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 104/175 (59%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +P+T E +R LFE+ G V + + +DK T +G CFV + + A A A
Sbjct: 278 KMFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDA 337
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ G I+++ AD E + KL+VG L+K+ ++ ++ ++F+ +G IE+
Sbjct: 338 LHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKFTEADVRQLFTGHGTIEEC 393
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++RD++ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV+ AD +K +
Sbjct: 394 TVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEK 448
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 160 EQASIKVRFADGE--REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDEL 217
+Q++ AD E ++ P A K++VG + K + ++ +F +G + + ++RD++
Sbjct: 254 DQSAGGATMADTESAKDQPDADNIKMFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKV 313
Query: 218 KQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
SRGC FV + R+ AL A L+ T+ G P+ ++ AD
Sbjct: 314 TSISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPAD 357
>gi|363742939|ref|XP_003642747.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gallus
gallus]
Length = 451
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG LSKQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++R S+GCAFV+F A AAI+ L+G+ T+ G+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + +ED+R +FE G + E + + G
Sbjct: 76 GMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGP-DGTS 134
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI AL+G PG +S+ V+FAD E+E
Sbjct: 135 KGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKE 178
>gi|281211191|gb|EFA85357.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 515
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 108/174 (62%), Gaps = 5/174 (2%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEH-GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
+ KL+V +P++ E++++ +F ++ G++ E+ + ++K+T + QG FV + ++A
Sbjct: 1 MSIKLFVGQIPKSFNEDNLKSMFADYEGSIQEISVIRNKQTNEPQGCAFVTLSSKDDAEK 60
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGH 206
AI+ L+ FPG S++V++AD E+E KL+VG L + + +I+ +F+ YG
Sbjct: 61 AIQTLHSSKKFPGVSNSLQVKYADSEQEKQST---KLFVGMLPRTYQEDDIKTLFADYGE 117
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
+EDI ++R +S+GC F++F +RE L+AIS LNG + S LVV+ AD
Sbjct: 118 VEDICLLRGNNNESKGCGFIRFQNRESCLSAISALNG-INLPPSPNNLVVKFAD 170
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
+ L+V +P + D+ LF +G+V+ + DK TG +G+ FV + A +AI
Sbjct: 375 SNLFVYNIPNYYNDSDMFNLFSPYGHVVSSKVYTDKSTGLSKGFGFVSYDNSIAANSAIA 434
Query: 150 ALNG 153
LNG
Sbjct: 435 NLNG 438
>gi|390176612|ref|XP_002132720.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858697|gb|EDY70122.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 818
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD+I K++V +P++ E +R +FEE+G V + + +DK TG +G CFV
Sbjct: 358 PDPDNI-------KMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 410
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F A A AL+ G I+++ AD E + KL+VG L+K+ ++ ++
Sbjct: 411 FFTRRAALKAQDALHNVKTLAGMYHPIQMKPADSENRNE----RKLFVGMLNKKLNENDV 466
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQPLVV 256
++F +G+IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G PLVV
Sbjct: 467 RKLFEVHGNIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVV 526
Query: 257 RIADPKKPR 265
+ AD +K +
Sbjct: 527 KFADTQKEK 535
>gi|195435051|ref|XP_002065515.1| GK15495 [Drosophila willistoni]
gi|194161600|gb|EDW76501.1| GK15495 [Drosophila willistoni]
Length = 758
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +P+T E +R +FE+ G+V + + +DK T +G CFV + + A A A
Sbjct: 285 KMFVGQIPKTWDETKLRRMFEQFGHVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDA 344
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ G I+++ AD E + KL+VG L+K+ ++ ++ ++F+ +G IE+
Sbjct: 345 LHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKYTEADVRQLFTGHGTIEEC 400
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++RD++ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV+ AD +K +
Sbjct: 401 TVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEK 455
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 170 DGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQF 228
D ++ P A K++VG + K + ++ +F +GH+ + ++RD++ SRGC FV +
Sbjct: 273 DLTKDQPDADNIKMFVGQIPKTWDETKLRRMFEQFGHVHTLNVLRDKVTSISRGCCFVTY 332
Query: 229 SHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
R+ AL A L+ T+ G P+ ++ AD
Sbjct: 333 YTRKAALRAQDALHNIKTLDGMHHPIQMKPAD 364
>gi|386769531|ref|NP_001246000.1| bruno-2, isoform G [Drosophila melanogaster]
gi|442627595|ref|NP_723742.2| bruno-2, isoform M [Drosophila melanogaster]
gi|383291458|gb|AFH03674.1| bruno-2, isoform G [Drosophila melanogaster]
gi|440213742|gb|AAF53180.4| bruno-2, isoform M [Drosophila melanogaster]
Length = 664
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 79 APDHIND--SGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PD I D K++V +P+T E +R +FE+ G V + + +DK T +G CFV
Sbjct: 282 SPDSIKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFV 341
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ G I+++ AD E + KL+VG L+K+ ++ +
Sbjct: 342 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKYTEAD 397
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ ++F+ +G IE+ ++RD+ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV
Sbjct: 398 VRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVV 457
Query: 257 RIADPKKPR 265
+ AD +K +
Sbjct: 458 KFADTQKEK 466
>gi|2231301|gb|AAB61993.1| testis-specific RNP-type RNA binding protein [Drosophila
melanogaster]
Length = 808
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 346 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 398
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 399 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 454
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 455 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 514
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 515 PLVVKFADTQKEK 527
>gi|195351033|ref|XP_002042041.1| GM26763 [Drosophila sechellia]
gi|194123865|gb|EDW45908.1| GM26763 [Drosophila sechellia]
Length = 816
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 342 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 394
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 395 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 450
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 451 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 510
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 511 PLVVKFADTQKEK 523
>gi|259089631|gb|ACV91671.1| AT31783p [Drosophila melanogaster]
Length = 810
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 348 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 400
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 401 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 456
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 457 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 516
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 517 PLVVKFADTQKEK 529
>gi|195351037|ref|XP_002042043.1| GM26785 [Drosophila sechellia]
gi|194123867|gb|EDW45910.1| GM26785 [Drosophila sechellia]
Length = 644
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 79 APDHIND--SGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PD I D K++V +P+T E +R +FE+ G V + + +DK T +G CFV
Sbjct: 294 SPDSIKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFV 353
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ G I+++ AD E + KL+VG L+K+ ++ +
Sbjct: 354 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKYTEAD 409
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ ++F+ +G IE+ ++RD+ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV
Sbjct: 410 VRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVV 469
Query: 257 RIADPKKPR 265
+ AD +K +
Sbjct: 470 KFADTQKEK 478
>gi|194861277|ref|XP_001969747.1| GG23780 [Drosophila erecta]
gi|190661614|gb|EDV58806.1| GG23780 [Drosophila erecta]
Length = 646
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 79 APDHIND--SGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PD I D K++V +P+T E +R +FE+ G V + + +DK T +G CFV
Sbjct: 298 SPDSIKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGAVHTLNVLRDKVTSISRGCCFV 357
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ G I+++ AD E + KL+VG L+K+ ++ +
Sbjct: 358 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKYTEAD 413
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ ++F+ +G IE+ ++RD+ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV
Sbjct: 414 VRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVV 473
Query: 257 RIADPKKPR 265
+ AD +K +
Sbjct: 474 KFADTQKEK 482
>gi|194861289|ref|XP_001969750.1| GG23776 [Drosophila erecta]
gi|190661617|gb|EDV58809.1| GG23776 [Drosophila erecta]
Length = 837
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 363 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 415
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 416 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 471
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 472 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 531
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 532 PLVVKFADTQKEK 544
>gi|116007320|ref|NP_001036356.1| bruno-2, isoform E [Drosophila melanogaster]
gi|442627593|ref|NP_001260411.1| bruno-2, isoform L [Drosophila melanogaster]
gi|113194979|gb|ABI31310.1| bruno-2, isoform E [Drosophila melanogaster]
gi|440213741|gb|AGB92946.1| bruno-2, isoform L [Drosophila melanogaster]
Length = 893
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 79 APDHIND--SGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PD I D K++V +P+T E +R +FE+ G V + + +DK T +G CFV
Sbjct: 282 SPDSIKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFV 341
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ G I+++ AD E + KL+VG L+K+ ++ +
Sbjct: 342 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKYTEAD 397
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ ++F+ +G IE+ ++RD+ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV
Sbjct: 398 VRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVV 457
Query: 257 RIADPKKPR 265
+ AD +K +
Sbjct: 458 KFADTQKEK 466
>gi|195388102|ref|XP_002052729.1| GJ17715 [Drosophila virilis]
gi|194149186|gb|EDW64884.1| GJ17715 [Drosophila virilis]
Length = 831
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 362 GEKEPDPDNI-------KMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGC 414
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 415 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 470
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 471 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 530
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 531 PLVVKFADTQKEK 543
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P+ T+ D+ F GNVI + DK+T + + FV F E A AI+A+
Sbjct: 748 LFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPESAQMAIKAM 807
Query: 152 NGHYI 156
NG +
Sbjct: 808 NGFQV 812
>gi|324507732|gb|ADY43273.1| CUGBP Elav family member 1-A [Ascaris suum]
gi|324510717|gb|ADY44479.1| CUGBP Elav family member 1-A, partial [Ascaris suum]
Length = 594
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD I K++V +PR+ E++ R LFE+ G+V ++ + +DK T +G CFV
Sbjct: 32 PDPDTI-------KMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVT 84
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F +A A AL+ + P ++++ AD E + KL+VG L+K+ +++++
Sbjct: 85 FYRRADAIAAQAALHNIRVLPQMHHPVQMKPADSENRNE----RKLFVGMLNKRLTEEDV 140
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+ +F+ +GHIED +++D +SRGCAFV F++R A AI ++ + TM G P+VV+
Sbjct: 141 KAMFAHFGHIEDCTVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQTMEGCSTPIVVK 200
Query: 258 IADPKKPR 265
AD +K +
Sbjct: 201 FADTQKEK 208
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P+ + D+ F GN++ + DK+T + + FV + A NAI AL
Sbjct: 495 LFIYHLPQDFADSDLVTTFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNAVSAQNAIAAL 554
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPP 180
NG I +KV+ G+ P P
Sbjct: 555 NGFQI---GSKRLKVQLKRGKDSKPYVHP 580
>gi|195578717|ref|XP_002079210.1| GD23828 [Drosophila simulans]
gi|194191219|gb|EDX04795.1| GD23828 [Drosophila simulans]
Length = 821
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 347 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 399
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 400 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 455
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 456 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 515
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 516 PLVVKFADTQKEK 528
>gi|24583873|ref|NP_723737.1| arrest, isoform B [Drosophila melanogaster]
gi|442627569|ref|NP_001260403.1| arrest, isoform G [Drosophila melanogaster]
gi|22946318|gb|AAN10810.1| arrest, isoform B [Drosophila melanogaster]
gi|375065944|gb|AFA28453.1| FI19388p1 [Drosophila melanogaster]
gi|440213733|gb|AGB92938.1| arrest, isoform G [Drosophila melanogaster]
Length = 810
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 348 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 400
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 401 CFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 456
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 457 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 516
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 517 PLVVKFADTQKEK 529
>gi|19921186|ref|NP_609559.1| bruno-2, isoform A [Drosophila melanogaster]
gi|17862264|gb|AAL39609.1| LD19052p [Drosophila melanogaster]
gi|22946323|gb|AAF53181.2| bruno-2, isoform A [Drosophila melanogaster]
gi|220943144|gb|ACL84115.1| bru-2-PA [synthetic construct]
Length = 632
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 79 APDHIND--SGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PD I D K++V +P+T E +R +FE+ G V + + +DK T +G CFV
Sbjct: 282 SPDSIKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFV 341
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ G I+++ AD E + KL+VG L+K+ ++ +
Sbjct: 342 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKYTEAD 397
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ ++F+ +G IE+ ++RD+ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV
Sbjct: 398 VRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVV 457
Query: 257 RIADPKKPR 265
+ AD +K +
Sbjct: 458 KFADTQKEK 466
>gi|195117924|ref|XP_002003495.1| GI17944 [Drosophila mojavensis]
gi|193914070|gb|EDW12937.1| GI17944 [Drosophila mojavensis]
Length = 851
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 382 GEKEPDPDNI-------KMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGC 434
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL++G L+K+ +
Sbjct: 435 CFVTFYTRRAALKAQDALHNVKTLSGMYHPIQMKPADSENRNE----RKLFIGMLNKKLN 490
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 491 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 550
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 551 PLVVKFADTQKEK 563
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P+ T+ D+ F GNVI + DK+T + + FV F E A AI+++
Sbjct: 768 LFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPESAQMAIKSM 827
Query: 152 NGHYI 156
NG +
Sbjct: 828 NGFQV 832
>gi|195472345|ref|XP_002088461.1| GE18580 [Drosophila yakuba]
gi|194174562|gb|EDW88173.1| GE18580 [Drosophila yakuba]
Length = 830
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 356 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 408
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 409 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 464
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 465 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 524
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 525 PLVVKFADTQKEK 537
>gi|324508266|gb|ADY43493.1| CUGBP Elav family member 1-A [Ascaris suum]
Length = 539
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P PD I K++V +PR+ E++ R LFE+ G+V ++ + +DK T +G CFV
Sbjct: 32 PDPDTI-------KMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVT 84
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F +A A AL+ + P ++++ AD E + KL+VG L+K+ +++++
Sbjct: 85 FYRRADAIAAQAALHNIRVLPQMHHPVQMKPADSENRNE----RKLFVGMLNKRLTEEDV 140
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
+ +F+ +GHIED +++D +SRGCAFV F++R A AI ++ + TM G P+VV+
Sbjct: 141 KAMFAHFGHIEDCTVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQTMEGCSTPIVVK 200
Query: 258 IADPKKPR 265
AD +K +
Sbjct: 201 FADTQKEK 208
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P+ + D+ F GN++ + DK+T + + FV + A NAI AL
Sbjct: 440 LFIYHLPQDFADSDLVTTFSPFGNILSAKVFIDKQTNLSKCFGFVSYDNAVSAQNAIAAL 499
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPP 180
NG I +KV+ G+ P P
Sbjct: 500 NGFQI---GSKRLKVQLKRGKDSKPYVHP 525
>gi|194761400|ref|XP_001962917.1| GF14192 [Drosophila ananassae]
gi|190616614|gb|EDV32138.1| GF14192 [Drosophila ananassae]
Length = 852
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 376 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGC 428
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 429 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 484
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 485 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 544
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 545 PLVVKFADTQKEK 557
>gi|442627571|ref|NP_001260404.1| arrest, isoform H [Drosophila melanogaster]
gi|442627573|ref|NP_001260405.1| arrest, isoform I [Drosophila melanogaster]
gi|442627575|ref|NP_001260406.1| arrest, isoform J [Drosophila melanogaster]
gi|442627577|ref|NP_001260407.1| arrest, isoform K [Drosophila melanogaster]
gi|440213734|gb|AGB92939.1| arrest, isoform H [Drosophila melanogaster]
gi|440213735|gb|AGB92940.1| arrest, isoform I [Drosophila melanogaster]
gi|440213736|gb|AGB92941.1| arrest, isoform J [Drosophila melanogaster]
gi|440213737|gb|AGB92942.1| arrest, isoform K [Drosophila melanogaster]
Length = 573
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 111 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 163
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 164 CFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 219
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 220 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 279
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 280 PLVVKFADTQKEK 292
>gi|390176614|ref|XP_003736147.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858698|gb|EIM52220.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 595
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 107/190 (56%), Gaps = 12/190 (6%)
Query: 77 HPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
P PD+I K++V +P++ E +R +FEE+G V + + +DK TG +G CFV
Sbjct: 134 EPDPDNI-------KMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFV 186
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
F A A AL+ G I+++ AD E + KL+VG L+K+ ++ +
Sbjct: 187 TFFTRRAALKAQDALHNVKTLAGMYHPIQMKPADSENRNE----RKLFVGMLNKKLNEND 242
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQPLV 255
+ ++F +G+IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G PLV
Sbjct: 243 VRKLFEVHGNIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLV 302
Query: 256 VRIADPKKPR 265
V+ AD +K +
Sbjct: 303 VKFADTQKEK 312
>gi|28574145|ref|NP_788039.1| bruno-2, isoform D [Drosophila melanogaster]
gi|442627591|ref|NP_001260410.1| bruno-2, isoform K [Drosophila melanogaster]
gi|28380348|gb|AAO41184.1| bruno-2, isoform D [Drosophila melanogaster]
gi|440213740|gb|AGB92945.1| bruno-2, isoform K [Drosophila melanogaster]
Length = 737
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 79 APDHIND--SGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFV 136
+PD I D K++V +P+T E +R +FE+ G V + + +DK T +G CFV
Sbjct: 282 SPDSIKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFV 341
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKE 196
+ + A A AL+ G I+++ AD E + KL+VG L+K+ ++ +
Sbjct: 342 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKYTEAD 397
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ ++F+ +G IE+ ++RD+ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV
Sbjct: 398 VRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVV 457
Query: 257 RIADPKKPR 265
+ AD +K +
Sbjct: 458 KFADTQKEK 466
>gi|2148976|gb|AAB58464.1| bruno [Drosophila melanogaster]
Length = 604
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 142 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 194
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 195 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 250
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 251 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 310
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 311 PLVVKFADTQKEK 323
>gi|401405877|ref|XP_003882388.1| putative RNA binding protein [Neospora caninum Liverpool]
gi|325116803|emb|CBZ52356.1| putative RNA binding protein [Neospora caninum Liverpool]
Length = 1060
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 34/258 (13%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL+V +P T TEE + LF + G + +++L +D+ T +G FV+ +A A
Sbjct: 99 VAIKLFVGRLPLTVTEEMLCTLFSQFGPIADLLLIRDRHTNAFKGCAFVRMQSITDADRA 158
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHPVAPPD------------KLYVGCLSKQTSKK 195
IR L+ Y+ ++V++A GE E P KL+VG L +
Sbjct: 159 IRHLDSAYVLDPALGGLQVKYAVGEAERLGLPGTSGSGAAAGVDQVKLFVGSLPPDIKED 218
Query: 196 EIEEVFSPYGHIEDIFIVRDE---------------LKQSR-GCAFVQFSHREMALAAIS 239
+ ++F +G +E++F++RD+ K+SR GCAFV+F+++E AL AI
Sbjct: 219 ALRDLFERFGRVEEVFLMRDDQPLSGNHLGGGAAKPGKKSRTGCAFVRFAYKEEALFAIG 278
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAG 299
LNG F M GS + + VR A+ ++ + A T S F+ ++ +S G
Sbjct: 279 ELNGKFVMPGSQRAMEVRFAENRRSSSSAQGAAPASRTASASSCFMS------SMDSSRG 332
Query: 300 GQILPNVSYRPQHIFNNS 317
G LP P+++ + S
Sbjct: 333 GSALPGADEYPENVRSTS 350
>gi|24583877|ref|NP_723739.1| arrest, isoform A [Drosophila melanogaster]
gi|281364913|ref|NP_001162963.1| arrest, isoform E [Drosophila melanogaster]
gi|15291827|gb|AAK93182.1| LD29068p [Drosophila melanogaster]
gi|22946320|gb|AAN10812.1| arrest, isoform A [Drosophila melanogaster]
gi|220945910|gb|ACL85498.1| aret-PA [synthetic construct]
gi|220955600|gb|ACL90343.1| aret-PA [synthetic construct]
gi|272407017|gb|ACZ94249.1| arrest, isoform E [Drosophila melanogaster]
Length = 604
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 142 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 194
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 195 CFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 250
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 251 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 310
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 311 PLVVKFADTQKEK 323
>gi|195035643|ref|XP_001989285.1| GH11642 [Drosophila grimshawi]
gi|193905285|gb|EDW04152.1| GH11642 [Drosophila grimshawi]
Length = 833
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 362 GEKEPDPDNI-------KMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGC 414
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 415 CFVTFYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 470
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD QS+GCAFV F+ + A++AI L+ M G
Sbjct: 471 ENDVRKLFEVHGGIEECTVLRDPNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 530
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 531 PLVVKFADTQKEK 543
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P+ T+ D+ F GNVI + DK+T + + FV F E A AI+A+
Sbjct: 750 LFIYHLPQEFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPESAQMAIKAM 809
Query: 152 NGHYI 156
NG +
Sbjct: 810 NGFQV 814
>gi|196012894|ref|XP_002116309.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
gi|190581264|gb|EDV21342.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
Length = 456
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR TEED+ LF++ G + E+ + KD+ T Q +G FV + A A A
Sbjct: 36 KLFVGQLPRDCTEEDLHSLFDQFGPIYELAVIKDRTTKQHKGCAFVTYCKKSSAEAAQSA 95
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ + G ++V+ AD E KL+VG L K + E++ +FSPYG IE++
Sbjct: 96 FHEKKVLSGMPRPMQVKPADCENREE----RKLFVGMLGKLDDENELKSMFSPYGSIEEV 151
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+R S+GC FV+FS + A AI L+G+ M G+ LVV+ AD +K +
Sbjct: 152 TILRAIDGSSKGCGFVKFSTKSEAQVAIQNLHGSRNMPGASHQLVVKFADTEKDK 206
>gi|442627567|ref|NP_723738.2| arrest, isoform F [Drosophila melanogaster]
gi|440213732|gb|AAN10811.2| arrest, isoform F [Drosophila melanogaster]
Length = 620
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G P PD+I K++V VP++ E +R +FEE+G V + + +DK TG +G
Sbjct: 142 GEKEPDPDNI-------KMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGC 194
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F A A AL+ G I+++ AD E + KL+VG L+K+ +
Sbjct: 195 CFVTFYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNE----RKLFVGMLNKKLN 250
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS-GLNGTFTMRGSDQ 252
+ ++ ++F +G IE+ ++RD+ QS+GCAFV F+ + A++AI L+ M G
Sbjct: 251 ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTS 310
Query: 253 PLVVRIADPKKPR 265
PLVV+ AD +K +
Sbjct: 311 PLVVKFADTQKEK 323
>gi|297697028|ref|XP_002825676.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Pongo abelii]
Length = 466
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
++R S+GCAFV+F + A AAI GL+G+ TM
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTM 200
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISG 240
KL+VG + + +++++ +F +G I ++ +++D L +GCAF+ + R+ AL A S
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTGELRG 271
L+ T+ G ++P+ V KP E RG
Sbjct: 107 LHEQKTLPGMNRPIQV------KPAASEGRG 131
>gi|207028384|ref|NP_001128707.1| CUGBP, Elav-like family member 2 [Xenopus laevis]
gi|197359134|gb|ACH69783.1| RNA binding protein Bruno-like 3b [Xenopus laevis]
Length = 493
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 53 MSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEE 112
M +E F NG G + P PD I K++V +PR+ +E++++ LFE
Sbjct: 28 MRNEELLFSNGTNNKMNGALDHSDQPDPDAI-------KMFVGQIPRSWSEKELKDLFEP 80
Query: 113 HGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G V ++ + +D+ Q +G CFV F + A A AL+ PG I+++ AD
Sbjct: 81 YGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGVHHPIQMKPAD 140
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRG----CAFV 226
E+ + V KL++G +SK+ ++ +I +FSP+G IE+ I+R SR CAFV
Sbjct: 141 SEKSNAV-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRASQHCCAFV 199
Query: 227 QFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
FS R M AI ++ + TM G P+VV+ AD +K +
Sbjct: 200 TFSTRAMTQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 238
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +H P PD K++VG + + S+KE++++F PYG + I ++RD + QS+GC
Sbjct: 44 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGC 103
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 104 CFVTFYTRKAALEAQNALHNIKTLPGVHHPIQMKPADSEKSNAVEDR 150
>gi|115473901|ref|NP_001060549.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|33354192|dbj|BAC81150.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|50510234|dbj|BAD31432.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|113612085|dbj|BAF22463.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|215713561|dbj|BAG94698.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 4/184 (2%)
Query: 85 DSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEA 144
D G +L+V VPR+ EEDI + + + +D+ TG +G CFV + EEA
Sbjct: 7 DGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEA 66
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
AI A + PG +++V++ADGE E +A KL++G L + + E+ +FS Y
Sbjct: 67 DKAIAAYHNKCTLPGASRAMQVKYADGELER-LAAEQKLFIGMLPRDVKENEVSALFSQY 125
Query: 205 GHIEDIFIVRD--ELKQSRGCAFVQFSHREMALAAISGLNGT-FTMRGSDQPLVVRIADP 261
G+I + ++R + +++ CA ++F +E A AAI LNGT GS LVV++AD
Sbjct: 126 GNIRQLKVLRSPQKTRKAAACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADT 185
Query: 262 KKPR 265
++ +
Sbjct: 186 EREK 189
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L+V +P+ +ED+ LF+E G ++ + D+ TG + + FV + A AIR
Sbjct: 348 ANLFVYDIPQEYGDEDLANLFQEFGRILSTKVFIDRATGVSKCFGFVSYDTPASAQAAIR 407
Query: 150 ALNGHYI 156
+NG I
Sbjct: 408 RMNGSQI 414
>gi|195148186|ref|XP_002015055.1| GL18624 [Drosophila persimilis]
gi|194107008|gb|EDW29051.1| GL18624 [Drosophila persimilis]
Length = 764
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +P+T E +R +FE+ G V + + +DK T +G CFV + + A A A
Sbjct: 324 KMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDA 383
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ G I+++ AD E + KL+VG L+K+ ++ ++ ++F+ +G IE+
Sbjct: 384 LHNIKTLDGMHHPIQMKPADSENRNE----RKLFVGMLNKKYTEADVRQLFTGHGTIEEC 439
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
++RD+ QS+GCAFV F+ ++ A+ AI L+ + TM G PLVV+ AD +K +
Sbjct: 440 TVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQTMEGCSAPLVVKFADTQKEK 494
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TE D+R LF HG + E + +D+ GQ +G FV F + A AI++
Sbjct: 411 KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQ-AGQSKGCAFVTFATKQNAIGAIKS 469
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGC 187
L+ G A + V+FAD ++E +L+ C
Sbjct: 470 LHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQLHAFC 506
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHR 231
++ P A K++VG + K + + ++F +G + + ++RD++ SRGC FV + R
Sbjct: 315 KDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTR 374
Query: 232 EMALAAISGLNGTFTMRGSDQPLVVRIAD 260
+ AL A L+ T+ G P+ ++ AD
Sbjct: 375 KAALRAQDALHNIKTLDGMHHPIQMKPAD 403
>gi|308456493|ref|XP_003090683.1| CRE-ETR-1 protein [Caenorhabditis remanei]
gi|308261154|gb|EFP05107.1| CRE-ETR-1 protein [Caenorhabditis remanei]
Length = 612
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 4/169 (2%)
Query: 97 VPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
+PR E D R LFE +G+V + +DK T +G CFV F ++A A AL+ +
Sbjct: 25 IPRQWNEVDCRRLFEAYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGALHNIKV 84
Query: 157 FPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE 216
G ++++ AD E + KL++G LSK+ S++ + E+FS +G IED ++RD
Sbjct: 85 IDGMHHPVQMKPADTENRNE----RKLFIGQLSKKHSEENLREIFSKFGQIEDCSVLRDN 140
Query: 217 LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+SRGCAFV F++R A+ A ++ + TM G PLVV+ AD +K +
Sbjct: 141 DGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDK 189
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ + + +EE++R +F + G + + + +D G+ +G FV FT A A +
Sbjct: 106 KLFIGQLSKKHSEENLREIFSKFGQIEDCSVLRDN-DGKSRGCAFVTFTNRSCAVVATKE 164
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
++ G A + V+FAD +++ V
Sbjct: 165 MHHSQTMEGCSAPLVVKFADTQKDKDV 191
>gi|148706792|gb|EDL38739.1| trinucleotide repeat containing 4, isoform CRA_e [Mus musculus]
Length = 447
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 4/169 (2%)
Query: 97 VPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
+PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A AL+
Sbjct: 15 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 74
Query: 157 FPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE 216
PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++ ++R
Sbjct: 75 LPGMNRPIQVKPADSESRGD----RKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP 130
Query: 217 LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 131 DGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + T+ED+R +FE G + E + + G +G FVKF EA AI
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKGCAFVKFQTHAEAQAAINT 154
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
L+ PG +S+ V+FAD E+E
Sbjct: 155 LHSSRTLPGASSSLVVKFADTEKE 178
>gi|294877840|ref|XP_002768153.1| hypothetical protein Pmar_PMAR002941 [Perkinsus marinus ATCC 50983]
gi|239870350|gb|EER00871.1| hypothetical protein Pmar_PMAR002941 [Perkinsus marinus ATCC 50983]
Length = 996
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC-FVKFTIFEEAGN 146
IP +L+V +P E++IR LFE +G V EV L + K G+QQ C FVKF EA
Sbjct: 7 IPVRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQTGCAFVKFGAVHEAAT 66
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD------KLYVGCLSKQTSKKEIEEV 200
AI++LNG Y ++V+FA+GE E P D KL+VG +S + +
Sbjct: 67 AIKSLNGTYKADDASGFVQVQFANGEPERLGLPEDTEGYSQKLFVGNVSSLLFEAKAMLF 126
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F YG++ + + + + AFV+FS + AL AI LN +T G P+ V+ AD
Sbjct: 127 FPRYGNVTEAYSLESKRASGNKAAFVRFSKKSDALKAIDALNDKYTFPGEPHPITVKCAD 186
Query: 261 PKKPR 265
++ R
Sbjct: 187 TREQR 191
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 87 GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
G KL+V V E F +GNV E + KR + FV+F+ +A
Sbjct: 104 GYSQKLFVGNVSSLLFEAKAMLFFPRYGNVTEAYSLESKRASGNKA-AFVRFSKKSDALK 162
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVA 178
AI ALN Y FPGE I V+ AD RE +A
Sbjct: 163 AIDALNDKYTFPGEPHPITVKCAD-TREQRLA 193
>gi|148706789|gb|EDL38736.1| trinucleotide repeat containing 4, isoform CRA_b [Mus musculus]
Length = 467
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 4/169 (2%)
Query: 97 VPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
+PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A AL+
Sbjct: 16 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 75
Query: 157 FPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE 216
PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++ ++R
Sbjct: 76 LPGMNRPIQVKPADSESRGD----RKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP 131
Query: 217 LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 132 DGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 180
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + T+ED+R +FE G + E + + G +G FVKF EA AI
Sbjct: 97 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKGCAFVKFQTHAEAQAAINT 155
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
L+ PG +S+ V+FAD E+E
Sbjct: 156 LHSSRTLPGASSSLVVKFADTEKE 179
>gi|66362598|ref|XP_628265.1| bruno-like protein with 2 RRM domains [Cryptosporidium parvum Iowa
II]
gi|46229739|gb|EAK90557.1| bruno-like protein with 2 RRM domains [Cryptosporidium parvum Iowa
II]
Length = 690
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 10/182 (5%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P KL+V VP+ T E++ +F ++G V+E + +D + +G FV+F+ EA NAI
Sbjct: 267 PVKLFVNRVPKHMTNEELLKIFNKYGLVVECNIIRD--SNGPKGCAFVRFSNIYEAQNAI 324
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPD--------KLYVGCLSKQTSKKEIEEV 200
++G + E I+V++ADGE E PD K++VG L K ++ ++ +
Sbjct: 325 LCIHGKTVLDKEVGPIQVKYADGEIERLGLSPDVQPCGESVKVFVGSLPKNCTEDQLLLL 384
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
F +GH++++ I+RD KQS+ AFV F + MA AI L+ + S +P+ VR+A
Sbjct: 385 FKQFGHVDEVHIIRDNNKQSKCSAFVTFPRKFMAENAIMFLDKKYIFDNSKRPIEVRLAK 444
Query: 261 PK 262
+
Sbjct: 445 SR 446
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAIS 239
P KL+V + K + +E+ ++F+ YG + + I+RD +GCAFV+FS+ A AI
Sbjct: 267 PVKLFVNRVPKHMTNEELLKIFNKYGLVVECNIIRDS-NGPKGCAFVRFSNIYEAQNAIL 325
Query: 240 GLNGTFTMRGSDQPLVVRIADPKKPRTG 267
++G + P+ V+ AD + R G
Sbjct: 326 CIHGKTVLDKEVGPIQVKYADGEIERLG 353
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 87 GIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
G K++V +P+ TE+ + LF++ G+V EV + +D Q + FV F A N
Sbjct: 362 GESVKVFVGSLPKNCTEDQLLLLFKQFGHVDEVHIIRDNNK-QSKCSAFVTFPRKFMAEN 420
Query: 147 AIRALNGHYIFPGEQASIKVRFA 169
AI L+ YIF + I+VR A
Sbjct: 421 AIMFLDKKYIFDNSKRPIEVRLA 443
>gi|281203518|gb|EFA77718.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 341
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 5/179 (2%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
I K++V +P + EE++ +FE+ GN++ + + KDKRT +G F+ F+ EEA A
Sbjct: 11 IGFKVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLA 70
Query: 148 IRALNGHYIFPGEQAS-IKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGH 206
I +N F G+ ++V+++D E E KL++G L + + VF YG
Sbjct: 71 INTVNSSNQFLGDVTKPLQVKYSDNEIEKM---ERKLFIGMLGS-ADEDTVTSVFGKYGA 126
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
IE++ IVR++ + +G F++FS RE A AI L+G T GS PL+V+ AD ++ +
Sbjct: 127 IEELTIVREKEGRPKGYGFIKFSAREEAEDAIRELDGKHTFAGSSIPLIVKFADTERQK 185
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
+ L++ +P+ + +++ LF+ +GNVI + DK T Q + + FV + + A NAI
Sbjct: 261 SDLFIYYLPQNYGDLELKMLFQTYGNVISAKVFIDKATNQSKCFGFVTYDNPQSALNAIN 320
Query: 150 ALNGHYIFPGEQASIKVRF 168
LNG F E +KV F
Sbjct: 321 DLNG---FAIEGKKLKVNF 336
>gi|310689905|pdb|3NMR|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
gi|310689907|pdb|3NNA|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K +V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 5 KXFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+ + AD E+ + V KL++G +SK+ ++ +I FS +G IE
Sbjct: 65 NALHNXKVLPGXHHPIQXKPADSEKNNAV-EDRKLFIGXISKKCTENDIRVXFSSFGQIE 123
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
+ I+R SRGCAFV F+ R A AI + T G P VV+ AD
Sbjct: 124 ECRILRGPDGLSRGCAFVTFTTRAXAQTAIKAXHQAQTXEGCSSPXVVKFAD 175
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGCAFVQFSHREMALAAI 238
K +VG + + S+K++ E+F YG + +I ++RD + QS+GC FV F R+ AL A
Sbjct: 5 KXFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 239 SGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
+ L+ + G P+ + AD +K E R
Sbjct: 65 NALHNXKVLPGXHHPIQXKPADSEKNNAVEDR 96
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR F G + E + + G +G FV
Sbjct: 84 PADSEKNNAVEDRKLFIGXISKKCTENDIRVXFSSFGQIEECRILRGP-DGLSRGCAFVT 142
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
FT A AI+A + G + V+FAD
Sbjct: 143 FTTRAXAQTAIKAXHQAQTXEGCSSPXVVKFAD 175
>gi|397632370|gb|EJK70525.1| hypothetical protein THAOC_08111, partial [Thalassiosira oceanica]
Length = 548
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 10/180 (5%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+T EED+ +FE +G ++++ + +D+R+G +G FV F E+A +
Sbjct: 24 KLFVGQVPKTLIEEDLAYVFEPYGPIVDLTVIRDRRSGNHRGCAFVTFESGEDAMRVVAD 83
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPD-------KLYVGCLSKQTSKKEIEEVFSP 203
++G Y F G +VR A GE + D KL+VG L + + + ++F+P
Sbjct: 84 MHGRYKFDGAPWPAQVRPAAGEIDGDGENNDGFEGEGTKLFVGQLPRDAEEDFVRDLFAP 143
Query: 204 YGHIEDIFIVRD---ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
YG I + I+R + GCAFV++ R MA AI L+G + G D+PL V+ A+
Sbjct: 144 YGSIVSVHIIRKRNPDAAARNGCAFVKYRERSMAERAIEALDGELQLEGVDRPLKVKFAN 203
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P+P + A L++ +P T+ D+ F GNVI + D+ TG+ +G+ FV
Sbjct: 359 PSPPRPREGPAGANLFIYHLPIDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVS 418
Query: 138 FTIFEEAGNAIRALNGHYI 156
+ A AI +NG I
Sbjct: 419 YDSVMSAELAIEQMNGFQI 437
>gi|359323408|ref|XP_854054.3| PREDICTED: CUGBP, Elav-like family member 6 [Canis lupus
familiaris]
Length = 413
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ A E KL+VG L KQ ++++ +F P+GHIE+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEEC 163
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
++R S+GCAFV+F + A AAI L+G+ TM
Sbjct: 164 TVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTM 200
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 115 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 173
Query: 131 QGYCFVKFTIFEEAGNAIRALNG 153
+G FVKF EA AI++L+G
Sbjct: 174 KGCAFVKFGSQGEAQAAIQSLHG 196
>gi|198431449|ref|XP_002130974.1| PREDICTED: similar to HrETR-1 [Ciona intestinalis]
Length = 538
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ VP+ E+++R +F G + E+ + +DK TG +G F+ +T A NA +
Sbjct: 76 KLFIGQVPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAFLTYTQKTSAMNAQNS 135
Query: 151 LNGHYIFPGEQASIKVRFAD----GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGH 206
L+ PG I+V+ AD GE KL+VG L K+ ++ ++ +F P+G
Sbjct: 136 LHERKTLPGMNHPIQVKPADTVSKGEDR-------KLFVGMLGKRQNEDDVRILFEPFGT 188
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
IE+ I+R QS+GCAFV+ S + A +A+ L+G+ TM G+ LVV+ AD K R
Sbjct: 189 IEECTILRTPEGQSKGCAFVKLSCHQEAKSAMEALHGSQTMPGASSSLVVKFADTDKER 247
>gi|198431689|ref|XP_002121627.1| PREDICTED: similar to CUG triplet repeat, RNA binding protein 2
[Ciona intestinalis]
Length = 498
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 106/190 (55%), Gaps = 10/190 (5%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+ P PD I K+++ +P+T E ++R E +G + ++ + ++K + +G CF
Sbjct: 13 DQPDPDAI-------KMFIGQIPKTWVESEVREFLEGYGPIYQLNILREKGSVMSKGCCF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V F + A A L+ PG ++++ AD E + + KL++G +SK+ +++
Sbjct: 66 VTFYTRKAALAAQNELHNMKTLPGMHHCVQMKPADSENK---SEDRKLFIGMISKKMTEQ 122
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLV 255
++ ++F P+G+IE+ I+ + S+GCAFV +S R A AI ++ + TM G P+V
Sbjct: 123 DLRQLFCPFGNIEECRILMNPDGVSKGCAFVTYSKRVSAQNAIRNMHQSTTMEGCSAPIV 182
Query: 256 VRIADPKKPR 265
V+IAD K +
Sbjct: 183 VKIADSPKDK 192
>gi|37588904|gb|AAH04145.2| TNRC4 protein, partial [Homo sapiens]
Length = 291
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 4/169 (2%)
Query: 97 VPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
+PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A AL+
Sbjct: 6 IPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKT 65
Query: 157 FPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE 216
PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++ ++R
Sbjct: 66 LPGMNRPIQVKPADSESRGD----RKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP 121
Query: 217 LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
S+GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 122 DGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 170
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + T+ED+R +FE G + E + + G +G FVKF EA AI
Sbjct: 87 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKGCAFVKFQTHAEAQAAINT 145
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
L+ PG +S+ V+FAD E+E
Sbjct: 146 LHSSRTLPGASSSLVVKFADTEKE 169
>gi|399217298|emb|CCF73985.1| unnamed protein product [Babesia microti strain RI]
Length = 432
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 11/182 (6%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V+ VP++ T+ D+ P F G V EV + KDK T + FVK +A +A+RA
Sbjct: 30 KLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADSAVRA 89
Query: 151 LNGHYIFPGEQASIKVRFADGE---------REHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
L+ + +++V++A GE P KL++G + K ++++I++VF
Sbjct: 90 LHNIKVLDASLGALQVKYAVGEVARLGLSNANSEPGVDQVKLFIGSVPKTITEEQIKKVF 149
Query: 202 SPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
YG +E++FI++D S+GCAFV+ S++E L AI +G T+ S +PL VR A+
Sbjct: 150 GEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLYAIKMADGKLTIDNS-KPLEVRFAE 208
Query: 261 PK 262
K
Sbjct: 209 AK 210
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 112/293 (38%), Gaps = 49/293 (16%)
Query: 178 APP--DKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMA 234
APP KL+V + K + ++ F P+G +E++ I++D+ + + CAFV+ A
Sbjct: 24 APPLSIKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADA 83
Query: 235 LAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNL 294
+A+ L+ + S L V+ A + R G N G
Sbjct: 84 DSAVRALHNIKVLDASLGALQVKYAVGEVARLGLSNANSEPGV----------------- 126
Query: 295 GNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQLSL 354
Q+ + P+ I +VF +G E I++ L + + +
Sbjct: 127 -----DQVKLFIGSVPKTITEEQIKKVFGEYGQVEEVF-IMKDLSTGLSKGCAFVKMSYK 180
Query: 355 QQ--IQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESESPRSGNNPQT 412
+Q I + +L+ D K L +R + + +Q V + P
Sbjct: 181 EQGLYAIKMADGKLT----IDNSKPLEVRFAEAKGKQQNAIPGVPI-----------PNI 225
Query: 413 SASASTIPTVPQSP-QVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEY 464
A P P P Q+ W E+ PDG YY++ +T ++W+ P E+
Sbjct: 226 GVGAMARPFQPGVPRQIGV-----WREYISPDGRPYYFSEQTGLTQWEVPPEF 273
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +P D+ F + G ++ + DK TG+ +G+ FV ++ E A AI
Sbjct: 332 ANLFIFHIPYDWYYADLVKTFSQFGTIVSARIATDKGTGRNRGFAFVSYSTVESAVKAIT 391
Query: 150 ALNGHYIFPGEQASIKVRFADGEREH 175
+NG I +KV GE ++
Sbjct: 392 CMNGFII---ANKKLKVTVKKGEEQY 414
>gi|449460525|ref|XP_004147996.1| PREDICTED: uncharacterized protein LOC101215309 [Cucumis sativus]
gi|449522950|ref|XP_004168488.1| PREDICTED: uncharacterized LOC101215309 [Cucumis sativus]
Length = 115
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 78/113 (69%), Gaps = 2/113 (1%)
Query: 425 SPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQQIEKQQKLQNGSQSV 484
S V + ECDWSEHTCPDG KYYYNC T ES W+KPEE+ LFEQQ+ K++KLQ + +
Sbjct: 5 SSWVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEQQL-KEEKLQKPNHQL 63
Query: 485 SSTKEVAQTQEVQLQPHVFRKKVQLQDPSVSASEQDHLQVQTKSSPVVHPTCV 537
S+ +QEV QP++ +K++ Q S + E D +++Q+K+SPVV P CV
Sbjct: 64 HSSLSGVSSQEVLPQPNLLSQKLEAQYSS-AVRELDCMRLQSKASPVVSPACV 115
>gi|403255513|ref|XP_003920470.1| PREDICTED: CUGBP Elav-like family member 1 [Saimiri boliviensis
boliviensis]
Length = 597
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 183 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 242
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + KL++G +SK+ ++ +I +FS +G IE
Sbjct: 243 NALHNMKVLPGMHHPIQMKPADSEKNN--VEDRKLFIGMISKKCTENDIRVMFSSFGQIE 300
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
+ I+R SRGCAFV F+ R MA AI ++ TM
Sbjct: 301 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTM 339
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 168 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 227
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
FV F R+ AL A + L+ + G P+ ++ AD +K
Sbjct: 228 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEK 267
>gi|403220835|dbj|BAM38968.1| ribonucleoprotein [Theileria orientalis strain Shintoku]
Length = 604
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 123/243 (50%), Gaps = 33/243 (13%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++A +PR EEDIR LFEE G V +V + KDK T + FVK +A AIR+
Sbjct: 88 KLFIARIPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQADAAIRS 147
Query: 151 LNG-HYIFPGEQASIKVRFADGEREH---------PVAPPDKLYVGCLSKQTSKKEIEEV 200
LN H + PG A +++R+A GE E P KL+VG L + S+++++++
Sbjct: 148 LNNQHTVEPGLGA-VQIRYATGEPERLGFTQMVGEPGVDTAKLFVGSLPRSFSEQDLQDL 206
Query: 201 FSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
F YG + F+++D ++GC FV+ ++E AL AI L+ ++ S +P+ VR A
Sbjct: 207 FKDYGDAVETFLMKDMNSGGNKGCGFVRMRYKEQALYAIRELDHKKMVKDSVKPIEVRFA 266
Query: 260 DPKKPRTGELRGNYAFGTPSFGPNFLEPV-RPPPNLGNSAGGQILPNVSYRPQHIFNNSH 318
K + P ++ + RPPP L I PN Y P FN +
Sbjct: 267 QSKNAAPQD-------------PRLMQRIKRPPPPLDG-----IFPN--YGPGGNFNGGY 306
Query: 319 PQV 321
++
Sbjct: 307 GKL 309
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 65/318 (20%)
Query: 178 APPD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMA 234
APP KL++ + + +++I ++F +G +ED+ I++D+ + CAFV+ + A
Sbjct: 82 APPASIKLFIARIPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQA 141
Query: 235 LAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNL 294
AAI LN T+ +P G ++ YA G P L
Sbjct: 142 DAAIRSLNNQHTV---------------EPGLGAVQIRYATGEPE-------------RL 173
Query: 295 GNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQE-------AATPIIQQLHCSQQQSSS 347
G + Q++ +F S P+ FS Q+ A + + S
Sbjct: 174 GFT---QMVGEPGVDTAKLFVGSLPRSFSEQDLQDLFKDYGDAVETFLMKDMNSGGNKGC 230
Query: 348 QLSQLSLQQIQIPRQNSQLSQQAVSDMQKQLHLRQSSTQNVEQQQNSHV-IVSESESPRS 406
++ ++ + ++ V D K + +R + ++N Q + + P
Sbjct: 231 GFVRMRYKEQALYAIRELDHKKMVKDSVKPIEVRFAQSKNAAPQDPRLMQRIKRPPPPLD 290
Query: 407 GNNP-------------------QTSASASTIPTVPQSPQVAASPECDWSEHTCPDGNKY 447
G P + AS + +P+ A + W E+ PDG Y
Sbjct: 291 GIFPNYGPGGNFNGGYGKLKKRKKNGASLGYMSYNNGNPRHAGA----WREYISPDGRFY 346
Query: 448 YYNCETCESRWDKPEEYL 465
Y+N ET ++W+ P ++L
Sbjct: 347 YFNVETGSTQWEVPRDFL 364
>gi|440906742|gb|ELR56971.1| CUGBP Elav-like family member 3, partial [Bos grunniens mutus]
Length = 476
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 9 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 68
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPD-KLYVGCLSKQTSKKEIEEVFS 202
L+ PG I+V+ AD E V D KL+VG L KQ + +++ ++F
Sbjct: 69 LHEQKTLPGMNRPIQVKPADSESRGGRFCTFGKVGMKDRKLFVGMLGKQQTDEDVRKMFE 128
Query: 203 PYGHIEDIFIVR--DELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
P+G I++ + + L S GCAFV+F A AAI+ L+ + T+ G+ LVV+ AD
Sbjct: 129 PFGTIDEWWALTPSSSLLNSSGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFAD 188
Query: 261 PKKPR 265
+K R
Sbjct: 189 TEKER 193
>gi|328873245|gb|EGG21612.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 370
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +P T E+++ +F++ G+++ + + KDK+T +G F+ + EEA NAI
Sbjct: 15 KVFVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEADNAINT 74
Query: 151 LNGHYIFPGEQAS-IKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
+N + G+ ++V+++D E E KL+VG L +++ +I+++FS YG+IED
Sbjct: 75 MNATNQYIGDMNKPLQVKYSDNEIEKM---ERKLFVGMLG-TSNEDQIKQLFSKYGNIED 130
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I IVR+ + +G FV+FS RE A AI ++ T+ GS P++V+ AD ++ +
Sbjct: 131 INIVREPDGKPKGYGFVKFSMREEAEEAIRDMDSKQTLPGSTLPIIVKFADTERQK 186
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P + + +++ LF+++GNV+ + DK TGQ + + FV + + A AI L
Sbjct: 292 LFIYYLPASYGDAELKNLFQQYGNVVSAKVFIDKNTGQSKCFGFVSYDRSQSAIQAINNL 351
Query: 152 NGHYIFPGEQASIKVRF 168
NG ++ E +KV F
Sbjct: 352 NGFHV---EGKKLKVNF 365
>gi|317419091|emb|CBN81129.1| CUG-BP-and ETR-3-like factor 4 [Dicentrarchus labrax]
Length = 527
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 18/181 (9%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAG----- 145
KL++ +PR E+D+RPLFEE G + E+ + KD+ TG + V IF
Sbjct: 52 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHK-VNLVVTKIFRSKTYLLPM 110
Query: 146 NAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYG 205
+ +R +N I+V+ AD E KL+VG L+KQ S+ ++ +F +G
Sbjct: 111 HTLRTMN---------RPIQVKPADSESR---GEDRKLFVGMLNKQQSEDDVRRLFESFG 158
Query: 206 HIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
IE+ I+R S+GCAFV++S A AAIS L+G+ TM G+ LVV+ AD K R
Sbjct: 159 SIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKER 218
Query: 266 T 266
T
Sbjct: 219 T 219
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +E+D+R LFE G++ E + + G +G FVK++ EA AI A
Sbjct: 135 KLFVGMLNKQQSEDDVRRLFESFGSIEECTILRGP-DGNSKGCAFVKYSSHAEAQAAISA 193
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPV 177
L+G PG +S+ V+FAD ++E +
Sbjct: 194 LHGSQTMPGASSSLVVKFADTDKERTI 220
>gi|328871825|gb|EGG20195.1| hypothetical protein DFA_07315 [Dictyostelium fasciculatum]
Length = 551
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 105/177 (59%), Gaps = 5/177 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIE-VVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
K+++ +P++ TE+D+R +F + + IE + + ++K T + QG F+ T + A +I
Sbjct: 5 VKIFIGQIPKSFTEDDLREMFADFVDSIEEIKVIRNKATQEPQGCAFITMTNPDVAEKSI 64
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
+ L+ FPG ++V++AD E+E KL+VG L K+ ++ ++ ++FS YG ++
Sbjct: 65 QQLHNSKKFPGVSNFLQVKYADSEQEKLST---KLFVGMLPKEYNEDDVRKLFSDYGDVD 121
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+I I+R QS+ C F++F RE L AIS LNG + S LVV+ AD +K R
Sbjct: 122 EICILRGPNNQSKSCGFIKFQSRESCLNAISSLNG-IRIPPSPHNLVVKFADTEKDR 177
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL+V +P+ E+D+R LF ++G+V E+ + + Q + F+KF E NA
Sbjct: 92 LSTKLFVGMLPKEYNEDDVRKLFSDYGDVDEICILRGPNN-QSKSCGFIKFQSRESCLNA 150
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREH 175
I +LNG I P ++ V+FAD E++
Sbjct: 151 ISSLNGIRI-PPSPHNLVVKFADTEKDR 177
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
+ L+V +P T+ ++ LF+ G VI + DK TG +G+ FV F A AI
Sbjct: 468 SNLFVYNIPNFYTDVELSVLFDPFGAVISSKVFIDKNTGTSKGFGFVSFDNPNSATTAIT 527
Query: 150 ALNGHYIFPGEQASIKVR 167
LNG + G++ + V+
Sbjct: 528 NLNG-MMLNGKKLKVTVK 544
>gi|413948822|gb|AFW81471.1| hypothetical protein ZEAMMB73_420516 [Zea mays]
Length = 486
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 36/208 (17%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ +E ++ +F V EV + +D+ T +G CF+ EEA A+ A
Sbjct: 35 KLFVGQVPKQMSEAELVAMFRGVALVDEVTVIRDRATRVSRGCCFLICPSREEADKAVTA 94
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL+VG L K + E+ ++FS YG+I+D+
Sbjct: 95 YHNKRTLPGASSPLQVKYADGELER---LEHKLFVGMLPKNVTDAEMIDLFSKYGNIKDL 151
Query: 211 FIVRDELKQSR-GCAFVQFSHREMALAAISGLNGT----FTMR----------------- 248
I+R + S+ GCAF+++ +E A+AAI LNGT F M+
Sbjct: 152 QILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEFRMKDAYRDCNLQTSPISHTL 211
Query: 249 -----------GSDQPLVVRIADPKKPR 265
GS PLVV+ AD +K R
Sbjct: 212 DGTSSLHIIVLGSSVPLVVKWADTEKER 239
>gi|326426729|gb|EGD72299.1| napor protein short isoform [Salpingoeca sp. ATCC 50818]
Length = 353
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +P++ EE + L + +G + ++++ K+K TG+ +G FV F + A +AI
Sbjct: 24 KLFVGQLPKSYGEEQLTALLQPYGAIHDMMILKNKMTGESRGCAFVTFCSRQSALSAIAD 83
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ P ++V+ AD E+ KL+VG +SK ++ ++E +F P+G IE +
Sbjct: 84 LHEKRTLPTMANPMQVKIADSEQR---GDDRKLFVGMISKTCTEADLEAMFRPFGEIESV 140
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
++ QS+GCAFV++++ A AI+ L+ + TM G P+VV+IAD
Sbjct: 141 NVLIGPEGQSKGCAFVKYTNAGSANQAIAKLHNSTTMEGCRAPMVVKIAD 190
>gi|147772817|emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
Length = 450
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 104/229 (45%), Gaps = 57/229 (24%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ TE + +F+E V EV + KDK T +G CFV +EA A+ A
Sbjct: 16 KLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNA 75
Query: 151 LNG-HYIFPGEQASI--------------------------------------------- 164
+ PG+ +I
Sbjct: 76 CHSDKRTLPGKHVNISHIGFMWHDAAADAWKIKATIVANENQQRKKCTREHTNFGLRLAF 135
Query: 165 --------KVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE 216
+V++ADGE E KL+VG L K S+ E+ +FS YG I+D+ I+R
Sbjct: 136 QVSASSPLQVKYADGELERL---EHKLFVGMLPKNVSEAEVSSLFSKYGTIKDLQILRGS 192
Query: 217 LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+ S+GCAF+++ +E ALAA+ +NG M GS PLVV+ AD +K R
Sbjct: 193 QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 241
>gi|345485141|ref|XP_001605146.2| PREDICTED: CUGBP Elav-like family member 2 [Nasonia vitripennis]
Length = 733
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 28/197 (14%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC--- 134
P PD+I K++V VP+ E D+R +FEE G V ++ + +DK TG +G C
Sbjct: 196 PDPDNI-------KMFVGQVPKDLDENDLRTIFEEFGRVHQINVLRDKYTGSSKGCCAAM 248
Query: 135 -----FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGE-REHPVAPPDKLYVGCL 188
T A ++R N + P I+++ AD E R H KL+VG L
Sbjct: 249 DYSRRLALDTKRARAPESVRTFN-QKLHP-----IQMKPADSENRSH-----RKLFVGML 297
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
SK+ ++ ++ +F YG IE+ ++R+ QS+GCAFV F+ ++ A+ AI L+ + TM
Sbjct: 298 SKKFTENDVRNMFDVYGEIEECSVLREN-GQSKGCAFVTFASKQSAVLAIKALHHSQTME 356
Query: 249 GSDQPLVVRIADPKKPR 265
G PLVV+ AD +K +
Sbjct: 357 GCSSPLVVKFADTQKDK 373
>gi|118402071|ref|XP_001033355.1| hypothetical protein TTHERM_00421000 [Tetrahymena thermophila]
gi|89287703|gb|EAR85692.1| hypothetical protein TTHERM_00421000 [Tetrahymena thermophila
SB210]
Length = 307
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 103/178 (57%), Gaps = 6/178 (3%)
Query: 85 DSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEA 144
++ + KL+V +P+T +E ++ F + G + EV + +D + GQ +G FVKF +A
Sbjct: 49 ENTVDLKLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNK-GQHKGCAFVKFASMTDA 107
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD---KLYVGCLSKQTSKKEIEEVF 201
AI A+ + FPG + ++++++AD E E D KL++G L K +++ I+++F
Sbjct: 108 EKAIEAV-KNTTFPGMKNNVEIKWADNEEERLGVNQDSDHKLFIGSLPKSCTEQNIKDIF 166
Query: 202 SPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+G IE++ +++D + +R AF++F +E A AI LN + ++ P+ VR A
Sbjct: 167 EFFGEIEELHLMKDNQQNTRQ-AFLKFKQKEKAHLAIRNLNSQVYINDAENPIEVRFA 223
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG L K K+++++ FS +G I ++ I+RD Q +GCAFV+F+ A AI +
Sbjct: 55 KLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQHKGCAFVKFASMTDAEKAIEAV 114
Query: 242 NGTFTMRGSDQPLVVRIADPKKPRTG 267
T T G + ++ AD ++ R G
Sbjct: 115 KNT-TFPGMKNNVEIKWADNEEERLG 139
>gi|345802740|ref|XP_003434959.1| PREDICTED: CUGBP, Elav-like family member 4 [Canis lupus
familiaris]
Length = 448
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR- 149
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G +F+ + + +R
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKG---CRFSTYCSRPSNLRD 111
Query: 150 --ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHI 207
+G PG I+V+ AD E KL+VG L+ Q S+ ++ + +I
Sbjct: 112 RGTRHGEGSLPGMNRPIQVKPADSESR---GEDRKLFVGMLNTQQSEDDVRRLVKALRNI 168
Query: 208 EDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
E+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K RT
Sbjct: 169 EECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERT 227
>gi|66825827|ref|XP_646268.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60474730|gb|EAL72667.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 368
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 105/182 (57%), Gaps = 5/182 (2%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
++V +P + EE + +F + GN++++ + KDKRT +G F+ F+ EEA NA+
Sbjct: 20 VFVGHIPSSMNEEGVSQIFNKFGNILDITIIKDKRTNVSKGCAFITFSTKEEADNALNTT 79
Query: 152 NGHYIFPGEQAS-IKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
N F ++V+++D E E KL++G L + + +I +F YG IED+
Sbjct: 80 NESGTFLENMNKPLQVKYSDNEIEKM---ERKLFIGMLGT-SDEDQIRILFGNYGIIEDL 135
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
IVR++ + +G F+++S R+ + A+ ++G T+ GS+ P++V+ AD ++ + +L
Sbjct: 136 NIVREKDGKPKGYGFIKYSTRDESENALREIDGKHTLPGSNLPIIVKFADTERQKRKKLL 195
Query: 271 GN 272
GN
Sbjct: 196 GN 197
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L++ +P T +E+++ LF +GNVI + DK T Q + + FV + + A AI+ L
Sbjct: 289 LFIYYLPFTYGDEELKQLFAPYGNVISSKVFIDKNTQQSKCFGFVSYDNTQSAIAAIQEL 348
Query: 152 NGHYIFPGEQASIKVRF 168
NG I E +KV F
Sbjct: 349 NGRAI---EGKKLKVNF 362
>gi|410928558|ref|XP_003977667.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 435
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 9/197 (4%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + E A A A
Sbjct: 8 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCL--SKQTSKKEIEEVFSPYGHIE 208
L+ PG S V + E KL + C+ + + S +++ +F P+G I+
Sbjct: 68 LHEQKTLPGLVYSGVVASSSSELL-------KLPITCIFATARQSDEDVRRLFEPFGSID 120
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
+ ++R S+GCAFV+F A AAI+ L+G+ TM G+ LVV+ AD +K R
Sbjct: 121 ECTVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLR 180
Query: 269 LRGNYAFGTPSFGPNFL 285
A FGP L
Sbjct: 181 RMQQVASQLGIFGPMTL 197
>gi|151936117|gb|ABS18835.1| ELAV-type RNA binding protein variant D [Caenorhabditis elegans]
Length = 327
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 99/170 (58%), Gaps = 6/170 (3%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P+P + I K++V +PR E D R LFE++G+V + +DK T +G CFV
Sbjct: 45 PSPSEPDTDAI--KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F ++A A AL+ + G ++++ AD E + KL++G LSK+ +++ +
Sbjct: 103 FYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNE----RKLFIGQLSKKHNEENL 158
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
E+F+ +GHIED ++RD+ +SRGCAFV F++R A+ A ++ + TM
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 208
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISG 240
K++VG + +Q ++ + +F YG + I+RD+ Q S+GC FV F HR+ A+ A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 241 LNGTFTMRGSDQPLVVRIAD 260
L+ + G P+ ++ AD
Sbjct: 116 LHNIKVIEGMHHPVQMKPAD 135
>gi|440800622|gb|ELR21658.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 6/181 (3%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + P KL+V VP+ E IR F +G ++ + + +D+ T +G FV ++
Sbjct: 2 PDQQGECAKPWKLFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYS 61
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEE 199
E A AI AL+ P A ++VR+AD E + KL++G L +++ + +
Sbjct: 62 TKEAADKAISALHSVVTIPPHTAPLQVRYADEELQQ--MAEHKLFIGKLPTTVTEELLRQ 119
Query: 200 VFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
+F+PYG+IE + I++ C FV++ +RE A AI LNG GS++PLVV+ A
Sbjct: 120 IFAPYGNIEKLNILKG--PADVNCGFVKYDNREEAEKAIRALNGKVV--GSNEPLVVKYA 175
Query: 260 D 260
D
Sbjct: 176 D 176
>gi|73961237|ref|XP_852916.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Canis lupus
familiaris]
Length = 488
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR- 149
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +G +F+ + + +R
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKG---CRFSTYCSRPSNLRD 111
Query: 150 --ALNGHYIFPGEQASIKVRFADGEREHPVA----PPD---KLYVGCLSKQTSKKEIEEV 200
+G PG I+V+ AD E + PP KL+VG L+ Q S+ ++ +
Sbjct: 112 RGTRHGEGSLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNTQQSEDDVRRL 171
Query: 201 FSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD
Sbjct: 172 VKALRNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFAD 231
Query: 261 PKKPRT 266
K RT
Sbjct: 232 TDKERT 237
>gi|351714404|gb|EHB17323.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 195
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 102/176 (57%), Gaps = 5/176 (2%)
Query: 81 DHINDSGIPA-KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVK 137
DH + + A K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G C V
Sbjct: 6 DHSDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVT 65
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F + A A AL+ + PG I+++ AD E+ + V KL++G +S++ ++ +I
Sbjct: 66 FYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISEKCTENDI 124
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR-GSDQ 252
+FS +G IE+ I+R SRGCAFV F+ R MA AI ++ TM GS Q
Sbjct: 125 RVMFSSFGQIEEYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQTMEVGSAQ 180
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGCAFVQFSHREMALAAI 238
K++VG + + S+K++ E+F YG + +I ++RD + QS+GC V F R+ AL A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAALEAQ 76
Query: 239 SGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
+ L+ + G P+ ++ AD +K E R
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 108
>gi|193204848|ref|NP_001122629.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
gi|351063344|emb|CCD71499.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
Length = 535
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 94/157 (59%), Gaps = 4/157 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
K++V +PR E D R LFE++G+V + +DK T +G CFV F ++A A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ + G ++++ AD E + KL++G LSK+ +++ + E+F+ +GHIED
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE----RKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
++RD+ +SRGCAFV F++R A+ A ++ + TM
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTM 208
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISG 240
K++VG + +Q ++ + +F YG + I+RD+ Q S+GC FV F HR+ A+ A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 241 LNGTFTMRGSDQPLVVRIAD 260
L+ + G P+ ++ AD
Sbjct: 116 LHNIKVIEGMHHPVQMKPAD 135
>gi|410052930|ref|XP_003953367.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Pan troglodytes]
Length = 484
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 30/271 (11%)
Query: 80 PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFT 139
PD + D KL+V +PR E+D++PLFE+ G + E + KD TG +G +
Sbjct: 36 PDGMKDLDA-IKLFVGQIPRHLDEKDLKPLFEQFGRIHENAVLKDPYTGMHKGCLPALYC 94
Query: 140 IFEEAGNAIRALNGHYIFPGEQASIKVR-----FADGEREHPVAPPDKLYVGCLSKQTSK 194
+ A A++ G ++ R F +R KL+VG L+KQ S+
Sbjct: 95 ARDSASKLKVAVHEQKTLSGVNRVLRCRPGWSAFRGRDR--------KLFVGMLNKQQSE 146
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
+++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ L
Sbjct: 147 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 206
Query: 255 VVRIADPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQIL 303
VV+ AD K RT ++ G TPS F ++ + +++G +
Sbjct: 207 VVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLS 266
Query: 304 PNVSYRPQHIFNNSHPQVFSNWGNQEAATPI 334
P V++ P HI Q+ + N ATPI
Sbjct: 267 PGVAFSPCHI-----QQIGAVSLNGLPATPI 292
>gi|432862983|ref|XP_004069969.1| PREDICTED: CUGBP Elav-like family member 2-like [Oryzias latipes]
Length = 462
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 58 TDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVI 117
+D NG G + P PD I K++V +PR+ TE +++ LFE G V
Sbjct: 21 SDTINGNSNKMNGSLEHMDQPDPDAI-------KMFVGQIPRSWTETELKELFEPFGAVY 73
Query: 118 EVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
++ + +D+ Q +G CFV F + A A AL+ G I+++ AD E+
Sbjct: 74 QINILRDRAQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTT 133
Query: 176 PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMAL 235
V KL++G +SK+ + E+ +FS +G IE+ I+R QSRGCAFV F+ R MA
Sbjct: 134 AV-EDRKLFIGMVSKKYGENEVRMMFSSFGQIEECRILRGPDGQSRGCAFVTFATRAMAQ 192
Query: 236 AAISGLNGTFTM 247
AI ++ + TM
Sbjct: 193 NAIKTMHHSQTM 204
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G EH P PD K++VG + + ++ E++E+F P+G + I I+RD + QS+GC
Sbjct: 32 NGSLEHMDQPDPDAIKMFVGQIPRSWTETELKELFEPFGAVYQINILRDRAQNPPQSKGC 91
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ T+ G P+ ++ AD +K E R
Sbjct: 92 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEKTTAVEDR 138
>gi|49328140|gb|AAT58838.1| unknown protein, contains RNA recognition motif,PF00076 [Oryza
sativa Japonica Group]
Length = 381
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 127 TGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVG 186
TG G CF+ EEA A+ A + PG + ++V++ADGE E KL++G
Sbjct: 59 TGPFAGCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYADGELERL---EHKLFIG 115
Query: 187 CLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTF 245
L K + E+ ++FS YG+I+D+ I+R + S+ GCAF+++ +E ALAAI LNG
Sbjct: 116 MLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKH 175
Query: 246 TMRGSDQPLVVRIADPKKPR 265
+ GS PLVV+ AD +K R
Sbjct: 176 KIEGSSVPLVVKWADTEKER 195
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +P+ T+ ++ LF ++GN+ ++ + + + + G F+K+ E+A AI A
Sbjct: 111 KLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEA 170
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
LNG + G + V++AD E+E
Sbjct: 171 LNGKHKIEGSSVPLVVKWADTEKE 194
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 100/188 (53%), Gaps = 12/188 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T TEE ++ LF + G V+ L KDK +G GY FV + EEA +AI+ +
Sbjct: 26 LIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSAEEAEHAIQKM 85
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + E ++KV +A R VA + +YV L Q S E++ +F PYG I
Sbjct: 86 NGTTL---ESKTLKVSYA---RPSSVAIKNANVYVANLPPQLSLTELDALFQPYGTIITS 139
Query: 211 FIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK---PRT 266
++ DE RG FV+F A AI+ LNG + G QPL+V+ A+P K P T
Sbjct: 140 KVLTDEDTGAGRGVGFVRFDKYTQAEVAIAALNGK-QLVGGTQPLLVKFANPPKAATPLT 198
Query: 267 GELRGNYA 274
G + G A
Sbjct: 199 GTVPGGLA 206
>gi|255636493|gb|ACU18585.1| unknown [Glycine max]
Length = 161
Score = 102 bits (255), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V VP+ E+++ +F+E V EV + +DK + +G CFV EEA A+ A
Sbjct: 17 KLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCFVICPSREEADKAVNA 76
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+ PG + ++V++ADGE E KL++G L K S+ E+ ++FS YG I+D+
Sbjct: 77 CHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNISEDEVSDLFSMYGTIKDL 133
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAI 238
I+R + S+GCAF+++ +E ALAA+
Sbjct: 134 QILRGSQQTSKGCAFLKYETKEQALAAL 161
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 169 ADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQS-RGCAFV 226
A+G+ E + KL+VG + K+ ++ E+ +F + ++++ I+RD+ ++ RGC FV
Sbjct: 3 AEGKEESKFSEESVKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCFV 62
Query: 227 QFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
RE A A++ + T+ G+ PL V+ AD + R
Sbjct: 63 ICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELER 101
>gi|222631366|gb|EEE63498.1| hypothetical protein OsJ_18314 [Oryza sativa Japonica Group]
Length = 492
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 127 TGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVG 186
TG G CF+ EEA A+ A + PG + ++V++ADGE E KL++G
Sbjct: 20 TGPFAGCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYADGELERL---EHKLFIG 76
Query: 187 CLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSR-GCAFVQFSHREMALAAISGLNGTF 245
L K + E+ ++FS YG+I+D+ I+R + S+ GCAF+++ +E ALAAI LNG
Sbjct: 77 MLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKH 136
Query: 246 TMRGSDQPLVVRIADPKKPR 265
+ GS PLVV+ AD +K R
Sbjct: 137 KIEGSSVPLVVKWADTEKER 156
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +P+ T+ ++ LF ++GN+ ++ + + + + G F+K+ E+A AI A
Sbjct: 72 KLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEA 131
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
LNG + G + V++AD E+E
Sbjct: 132 LNGKHKIEGSSVPLVVKWADTEKE 155
>gi|327493207|gb|AEA86310.1| RNA-binding protein [Solanum nigrum]
Length = 187
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSK 190
+G CFV EEA AI A + PG + ++V++ADG E KL+VG L K
Sbjct: 4 RGCCFVICPSREEANKAITACHNKQTLPGASSPLQVKYADGVLERL---EHKLFVGMLPK 60
Query: 191 QTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGS 250
S E+ +FS YG I D+ I+R + SRG AF+++ +E A+AA+ LNG TM G+
Sbjct: 61 NVSDLEVSSLFSQYGTITDLQILRGSQQASRGYAFLKYEKKEQAIAAVEALNGKHTMEGA 120
Query: 251 DQPLVVRIADPKKPR 265
PLVV+ AD ++ R
Sbjct: 121 TVPLVVKWADTERER 135
>gi|355701918|gb|EHH29271.1| CUGBP Elav-like family member 4, partial [Macaca mulatta]
Length = 409
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 35/183 (19%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR E+D++PLFEE G + E+ + KD+ TG +
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK------------------- 95
Query: 151 LNGHYIFPGEQASIKVRFADGERE-------HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
I+V+ AD E P + KL+VG L+KQ S+ ++ +F
Sbjct: 96 ---------MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEA 146
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
+G+IE+ I+R S+GCAFV++S A AAI+ L+G+ TM G+ LVV+ AD K
Sbjct: 147 FGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDK 206
Query: 264 PRT 266
RT
Sbjct: 207 ERT 209
>gi|341865543|tpg|DAA34911.1| TPA_exp: RRM domain-containing RNA-binding protein Bruno
[Pleurobrachia pileus]
Length = 384
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL+V VP+ E D++P FE++G ++ + + +D+ + +G FV FT + A NA
Sbjct: 16 MTLKLFVGQVPKNFEESDLKPYFEKYGPLVNIKVCRDRDSKAHKGCAFVTFTNLDNAENA 75
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHI 207
+ ++ PG + ++++ + +L+VG +SK + E++ +F +G +
Sbjct: 76 MHEMHDRIALPGAKKEMQIKAVHDDDNKKF--DKRLFVGMISKSLNGDELKAMFEQFGEV 133
Query: 208 EDIFIVRDEL---KQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
D I+ + K SRGC FV+F+ L AI ++ + TM G + PLVV+ AD
Sbjct: 134 VDCNILTSMINGEKMSRGCGFVKFAKASSCLQAIKEMHQSQTMEGCNSPLVVKHAD 189
>gi|340369729|ref|XP_003383400.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Amphimedon
queenslandica]
Length = 447
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +P+ EE I+ L EE G + E+ + KDK + +G FV + + E A NA +
Sbjct: 18 KLFVGQIPKEYDEEQIKALLEEFGPIHEINIIKDKEK-RSKGCAFVTYCLKESAVNAQQN 76
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ P ++V+ A + +L+VG LS + S +++ +FSP+G +ED+
Sbjct: 77 LHEKRTLPAMNHPMQVKPAT-QSNRDKGEDRRLFVGQLSPEMSDEQVANLFSPFGLVEDV 135
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
I+RD+ S+ AFV+ R A+ AI GL+ + T+ G P+ V+IAD ++ +
Sbjct: 136 SILRDKDGVSKKAAFVRMGSRNEAMTAIQGLHQSCTLPGVSHPVNVKIADTEREK 190
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG + K+ +++I+ + +G I +I I++D+ K+S+GCAFV + +E A+ A L
Sbjct: 18 KLFVGQIPKEYDEEQIKALLEEFGPIHEINIIKDKEKRSKGCAFVTYCLKESAVNAQQNL 77
Query: 242 NGTFTMRGSDQPLVVRIADPKKPRTGELR 270
+ T+ + P+ V+ A GE R
Sbjct: 78 HEKRTLPAMNHPMQVKPATQSNRDKGEDR 106
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA D G +L+V + ++E + LF G V +V + +DK G + FV+
Sbjct: 94 PATQSNRDKGEDRRLFVGQLSPEMSDEQVANLFSPFGLVEDVSILRDK-DGVSKKAAFVR 152
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
EA AI+ L+ PG + V+ AD ERE
Sbjct: 153 MGSRNEAMTAIQGLHQSCTLPGVSHPVNVKIADTERE 189
>gi|307106109|gb|EFN54356.1| hypothetical protein CHLNCDRAFT_135626 [Chlorella variabilis]
Length = 466
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 86 SGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAG 145
+G+P +L+V +P + TEED+ P+F +G + +V L + + +G C V+F + +A
Sbjct: 11 AGVP-RLFVGQIPTSCTEEDLVPVFAGYGEIEKVSLVRGPDN-KSRGCCMVQFKRWADAE 68
Query: 146 NAIRALNGHY-IFPGEQASIKVRFADGER-------EHPVAPPDKLYVGCLSKQTSKKEI 197
A+ +NG + G+ + FA+ R E +AP KL+VG + K + + +I
Sbjct: 69 RAMLDVNGTSPLESGKGRPLVCHFANPRRTMGSQMSETAIAP-RKLFVGQIPKTSVEADI 127
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
VF P+G +E I I++ + + GCAFVQ+S AAI L+ TM G++ PLVV+
Sbjct: 128 LAVFGPFGEVEQINILKSKGVHA-GCAFVQYSSWAACEAAIEALHDKTTMPGAEHPLVVK 186
Query: 258 IADPKKPRTGELR 270
AD KK G ++
Sbjct: 187 FADAKKSDAGMMQ 199
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
VA +L+VG + +++++ VF+ YG IE + +VR +SRGC VQF A
Sbjct: 10 VAGVPRLFVGQIPTSCTEEDLVPVFAGYGEIEKVSLVRGPDNKSRGCCMVQFKRWADAER 69
Query: 237 AISGLNGTFTMR-GSDQPLVVRIADPKK 263
A+ +NGT + G +PLV A+P++
Sbjct: 70 AMLDVNGTSPLESGKGRPLVCHFANPRR 97
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 176 PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMAL 235
P A KL++G + + ++++ +F+P G I ++ I+R + +S+GCAF+ ++ R+ A
Sbjct: 379 PSAYAHKLFIGQIPFEAIEQDLWALFAPAGDILELAILRSQ-GRSKGCAFLTYASRQQAT 437
Query: 236 AAISGLNGTFTMRGSDQPLVVRIADPK 262
+AI+ NG G + LVV+ AD K
Sbjct: 438 SAINAFNGRQV--GPSKRLVVKFADQK 462
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +P A E+D+ LF G+++E+ + + + G+ +G F+ + ++A +AI A
Sbjct: 385 KLFIGQIPFEAIEQDLWALFAPAGDILELAILRSQ--GRSKGCAFLTYASRQQATSAINA 442
Query: 151 LNGHYIFPGEQASIKVRFAD 170
NG + P ++ + V+FAD
Sbjct: 443 FNGRQVGPSKR--LVVKFAD 460
>gi|198425950|ref|XP_002126161.1| PREDICTED: similar to ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 (Hu antigen D) [Ciona intestinalis]
Length = 564
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ T+ED+R LF G + L +DK TGQ GY FV + +A AI +L
Sbjct: 90 LIINYLPQAMTQEDLRNLFSSIGELESCKLIRDKLTGQSLGYGFVNYVKAADAEKAINSL 149
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGH-IEDI 210
NG + +Q +IKV FA P+ LYV L K ++++++ +F P+G I
Sbjct: 150 NGLRM---QQKTIKVSFA--RPSTPLIKDANLYVSGLPKSMTQEDLQRIFHPFGRIITSR 204
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA-DPKKPRTGEL 269
+V SRG FV+F R A AIS LNGT G+ P+ V+ A +P + L
Sbjct: 205 ILVEPSTGMSRGVGFVRFDKRPEAENAISALNGTIP-AGAKDPVTVKFANNPSQKNQQVL 263
Query: 270 RGNYA-------FGTPSFGPNF 284
+ YA TP+ GP +
Sbjct: 264 QSLYAAASPTRRLATPAAGPLY 285
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG M K F P+ I D A LYV+ +P++ T+ED++ +F G +I
Sbjct: 149 LNGLRMQQKTIKVSFARPSTPLIKD----ANLYVSGLPKSMTQEDLQRIFHPFGRIITSR 204
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ + TG +G FV+F EA NAI ALNG I G + + V+FA+
Sbjct: 205 ILVEPSTGMSRGVGFVRFDKRPEAENAISALNGT-IPAGAKDPVTVKFAN 253
>gi|449269404|gb|EMC80177.1| CUG-BP- and ETR-3-like factor 3, partial [Columba livia]
Length = 449
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 14/180 (7%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E D++PLFEE G + E+ + KD+ TG +G F+ + + A A A
Sbjct: 14 KLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSA 73
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ S+ ++ +F P+G IE+
Sbjct: 74 LHEQKTLPGMNRPIQVKPADSEGR---GEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 130
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISG----LNGTFTMRGSDQPLVVRIADPKKPRT 266
I+R S+G + A A G L+G+ TM G+ LVV+ AD K RT
Sbjct: 131 TILRGPDGASKGGFW-------GAGGAPHGCRHPLHGSQTMPGASSSLVVKFADTDKERT 183
>gi|313227641|emb|CBY22788.1| unnamed protein product [Oikopleura dioica]
Length = 401
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Query: 109 LFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRF 168
+F+E G V ++ + +D+ TG +G CFV F + A +A RALNG + PG +++R
Sbjct: 1 MFKEFGEVFDLQILRDRITGHSRGCCFVTFFETKSADDAQRALNGIRVLPGMLNPVQMRA 60
Query: 169 ADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQF 228
AD E+ +L++G L ++ ++++F YG I+++ ++R SR CAF+ F
Sbjct: 61 ADSEKRSD----RRLFIGMLPITCDEEMLKKMFEQYGKIQELQVLRKFNGTSRRCAFLTF 116
Query: 229 SHREMALAAISGLNGTFTMRGSDQPLVVRIADPKK 263
S R A +A+ LN T Q +VVR+AD K
Sbjct: 117 SSRLEAQSAVQALNNTVVSSICAQGMVVRLADTPK 151
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 172 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 226
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 227 ILCDNITGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 275
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 358 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 242 NG 243
NG
Sbjct: 418 NG 419
>gi|237836675|ref|XP_002367635.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|211965299|gb|EEB00495.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|221483936|gb|EEE22240.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221505218|gb|EEE30872.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 230
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 27/189 (14%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ KL+V +P T TE+ + LF + G + +VVL +D+ T +G FV +A A
Sbjct: 37 VAVKLFVGRLPLTVTEDILCTLFNQFGPIADVVLIRDRHTNAFKGCAFVTMQSITDADRA 96
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHPVAPPD------------KLYVGCLSKQTSKK 195
IR L+ Y+ ++V++A GE E P KL+VG L +
Sbjct: 97 IRHLDSAYVLDPALGGLQVKYAVGEAERLGLPGTSGSGAAAGVDQVKLFVGSLPPDIKED 156
Query: 196 EIEEVFSPYGHIEDIFIVRDE--------------LKQSR-GCAFVQFSHREMALAAISG 240
+ ++F +G +E++F+++DE K+SR GCAFV+F+++E A AIS
Sbjct: 157 ALRDLFERFGRVEEVFLMKDEPGNGANLSGGAPRPGKKSRTGCAFVRFAYKEEAFFAISE 216
Query: 241 LNGTFTMRG 249
LNG M G
Sbjct: 217 LNGKVIMPG 225
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 172 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 226
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 227 ILCDNITGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 275
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 358 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 242 NG 243
NG
Sbjct: 418 NG 419
>gi|12642586|gb|AAK00297.1|AF314172_1 BRUNOL2 [Mus musculus]
Length = 436
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCL 188
Q +G CFV F + A A AL+ + PG I+++ AD E+ + V KL++G +
Sbjct: 6 QSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMI 64
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
SK+ ++ +I +FS +G IE+ I+R SRGCAFV F+ R MA AI ++ TM
Sbjct: 65 SKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTME 124
Query: 249 GSDQPLVVRIADPKKPR 265
G P+VV+ AD +K +
Sbjct: 125 GCSSPMVVKFADTQKDK 141
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
PA N++ KL++ + + TE DIR +F G + E + + G +G FV
Sbjct: 45 PADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVT 103
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
FT A AI+A++ G + + V+FAD +++
Sbjct: 104 FTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKD 140
>gi|195342135|ref|XP_002037657.1| GM18380 [Drosophila sechellia]
gi|194132507|gb|EDW54075.1| GM18380 [Drosophila sechellia]
Length = 650
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 318 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 377
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 378 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 432
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 433 ILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 486
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 569 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 628
Query: 242 NG 243
NG
Sbjct: 629 NG 630
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 100 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 159
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 160 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 214
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 215 ILCDNITDEHAQGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 268
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 351 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 410
Query: 242 NG 243
NG
Sbjct: 411 NG 412
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 121 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 180
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 181 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 235
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 236 ILCDNITDEHAPGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 289
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 372 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 431
Query: 242 NG 243
NG
Sbjct: 432 NG 433
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 126 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 185
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 186 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 240
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 241 ILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 294
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 377 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 436
Query: 242 NG 243
NG
Sbjct: 437 NG 438
>gi|324512454|gb|ADY45159.1| ELAV-like protein 1 [Ascaris suum]
Length = 477
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+T ++E++R LF G + L +DK TGQ GY FV + E+A A+ L
Sbjct: 105 LIINYLPQTMSQEEVRSLFSSMGEIDSCKLVRDKITGQSLGYGFVNYVRQEDALKAVSTL 164
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV FA E LYV L K S+ E+E +F PYG I
Sbjct: 165 NGLRL---QNKTIKVSFARPSSESIKGA--NLYVSGLPKSMSQPELENLFRPYGQIITSR 219
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G FV+F + A AIS LNGT G +P+ V+ A+
Sbjct: 220 ILSDNITGLSKGVGFVRFDRKGEAEVAISKLNGTIPA-GCTEPVTVKFAN 268
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I A LYV+ +P++ ++ ++ LF +G +I + D TG +
Sbjct: 175 KVSFARPSSESIKG----ANLYVSGLPKSMSQPELENLFRPYGQIITSRILSDNITGLSK 230
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV+F EA AI LNG I G + V+FA+
Sbjct: 231 GVGFVRFDRKGEAEVAISKLNGT-IPAGCTEPVTVKFAN 268
>gi|124248380|gb|ABM92810.1| IP15810p [Drosophila melanogaster]
Length = 647
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 315 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 374
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 375 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 429
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 430 ILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 483
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 566 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 625
Query: 242 NG 243
NG
Sbjct: 626 NG 627
>gi|395512536|ref|XP_003775304.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Sarcophilus
harrisii]
Length = 287
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 43 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 102
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 103 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 156
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 157 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GASEPITVKFANNPSQKTGQ 214
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 102 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 157
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 158 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GASEPITVKFAN 206
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 172 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 226
Query: 212 IVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 227 ILCDNITGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 275
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 358 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 242 NG 243
NG
Sbjct: 418 NG 419
>gi|156368353|ref|XP_001627659.1| predicted protein [Nematostella vectensis]
gi|156214575|gb|EDO35559.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 88/158 (55%), Gaps = 26/158 (16%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
KL+V VPRT E+D+RP+FE +G + E+ + KDK TGQ +G+ +A NA +
Sbjct: 20 VKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKGW---------DACNAAQ 70
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
+ ++ P KL+VG +SK ++++ +FSP+G IE+
Sbjct: 71 -----------------KHLHEKKTLPGMDDRKLFVGMISKHAKEEDLRVMFSPFGTIEE 113
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTM 247
+ ++R+ S+GCAF++F++R A AI+ ++ + TM
Sbjct: 114 LTVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTM 151
>gi|327264130|ref|XP_003216869.1| PREDICTED: ELAV-like protein 3-like [Anolis carolinensis]
Length = 386
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 67 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDSNDADKAINTL 126
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 127 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 180
Query: 211 FIVRDELKQ--SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 181 RILVDQVTAGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GASEPITVKFANNPSQKTGQ 239
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 93/246 (37%), Gaps = 68/246 (27%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 126 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 181
Query: 121 LPKDKRT-GQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD--------G 171
+ D+ T G +G F++F EA AI+ LNG G I V+FA+
Sbjct: 182 ILVDQVTAGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GASEPITVKFANNPSQKTGQA 240
Query: 172 EREHPVAPPDKLYVGCLSKQTSKKEIEEVFS----------------------------- 202
H + Y G L QT + ++ + +
Sbjct: 241 LLTHLYQTTARRYTGPLHHQTQRFRLDNLLNMAYGVKRFSPITIDSMTSLAGVNLTGASS 300
Query: 203 ------------------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAA 237
P+G + ++ ++RD + +G FV ++ + A A
Sbjct: 301 AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 360
Query: 238 ISGLNG 243
I+ LNG
Sbjct: 361 IASLNG 366
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 115 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 174
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSP+G I
Sbjct: 175 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPFGKIITSR 229
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 230 ILCDNITGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 278
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 361 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 420
Query: 242 NG 243
NG
Sbjct: 421 NG 422
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 123 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 182
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 183 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 237
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 238 ILCDNITDEHAPGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 291
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 374 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 433
Query: 242 NG 243
NG
Sbjct: 434 NG 435
>gi|432116895|gb|ELK37482.1| CUGBP Elav-like family member 5 [Myotis davidii]
Length = 426
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 126/285 (44%), Gaps = 66/285 (23%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++PLFE+ G + E+ + KD TG +G
Sbjct: 8 KLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKG------------------ 49
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
+R KL+VG L+KQ S++++ +F P+G I++
Sbjct: 50 ---------------------DR--------KLFVGMLNKQQSEEDVLRLFQPFGVIDEC 80
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT---- 266
++R S+GCAFV+FS A AAI L+G+ TM G+ LVV+ AD K RT
Sbjct: 81 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 140
Query: 267 GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHP 319
++ G TPS F ++ + +++G + P V++ P HI
Sbjct: 141 QQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHI-----Q 195
Query: 320 QVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQLSLQQIQIPRQNS 364
Q+ + N ATPI S S LS ++ + P NS
Sbjct: 196 QIGAVSLNGLPATPIAP---ASGLHSPPLLSTAAVPGLMAPITNS 237
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 12/177 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + VP + ++EDI+ +F GNV L +D+ TGQ GY FV + ++A A+R +
Sbjct: 12 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREM 71
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK---LYVGCLSKQTSKKEIEEVFSPYGHIE 208
NG + + ++KV FA P + K LY+ L K ++E+E +F P+G I
Sbjct: 72 NGARL---QNKTLKVSFA-----RPSSTEIKNANLYISGLPKDMKEEEVEALFKPFGKII 123
Query: 209 DIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
+++D + RG FV+F R A AI LN T+ G++ L V+ A+P R
Sbjct: 124 TSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNK-TLPGTNVKLTVKFANPPNSR 179
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ I + A LY++ +P+ EE++ LF+ G +I + KD +G+ +
Sbjct: 82 KVSFARPSSTEIKN----ANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGR 136
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV+F EA AI LN + PG + V+FA+
Sbjct: 137 GTGFVRFDKRCEAQTAIDDLNNKTL-PGTNVKLTVKFAN 174
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 104 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 163
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 164 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 218
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 219 ILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 272
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 355 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 414
Query: 242 NG 243
NG
Sbjct: 415 NG 416
>gi|355562286|gb|EHH18880.1| hypothetical protein EGK_19447, partial [Macaca mulatta]
gi|355782632|gb|EHH64553.1| hypothetical protein EGM_17798, partial [Macaca fascicularis]
Length = 433
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQ 191
G CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+
Sbjct: 3 GCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKK 61
Query: 192 TSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
++ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G
Sbjct: 62 CNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCS 121
Query: 252 QPLVVRIADPKKPR 265
P+VV+ AD +K +
Sbjct: 122 SPIVVKFADTQKDK 135
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ V + E DIR +F G + E + + G +G FV F+ A NAI+A
Sbjct: 52 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD-GLSRGCAFVTFSTRAMAQNAIKA 110
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
++ G + I V+FAD +++
Sbjct: 111 MHQSQTMEGCSSPIVVKFADTQKD 134
>gi|384247531|gb|EIE21017.1| RNA-binding domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 344
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
+L+V VP EED+ PLF G V + + K G+ +G V F + +A A A
Sbjct: 14 RLFVGQVPSDVREEDLWPLFTPFGTVRNLHMLKGS-DGKPRGCAMVLFQRWAQAEAAAEA 72
Query: 151 LNGHYIF--PGEQASIKVRFADGEREHPVAP------PDKLYVGCLSKQTSKKEIEEVFS 202
L+G + G++ + V FA+ R P P P KL+VG + + ++ + +F
Sbjct: 73 LDGQLVLETGGQRKPLVVHFANPRRAPPGQPAEPGIAPRKLFVGQVPRDVTEDTLRPLFE 132
Query: 203 PYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPK 262
PYG IE I I+R QS GCAFVQF A A+ NG + S+ PLVV+ AD K
Sbjct: 133 PYGDIEHINILRTHRGQSAGCAFVQFQKWAQAEVAMEAHNGKTRLGNSEVPLVVKFADAK 192
Query: 263 K--PRTGELRGNYAFG 276
+ G++ G + G
Sbjct: 193 RKDAVAGQMHGGWMGG 208
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P KL+V VPR TE+ +RPLFE +G++ + + + R GQ G FV+F + +A A+
Sbjct: 110 PRKLFVGQVPRDVTEDTLRPLFEPYGDIEHINILRTHR-GQSAGCAFVQFQKWAQAEVAM 168
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
A NG + + V+FAD +R+ VA +++ G + Q
Sbjct: 169 EAHNGKTRLGNSEVPLVVKFADAKRKDAVA--GQMHGGWMGGQMG 211
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 176 PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMAL 235
PVA +L+VG + ++++ +F+P+G + ++ +++ + RGCA V F A
Sbjct: 8 PVASEPRLFVGQVPSDVREEDLWPLFTPFGTVRNLHMLKGSDGKPRGCAMVLFQRWAQAE 67
Query: 236 AAISGLNGTFTMR--GSDQPLVVRIADPKKPRTGE 268
AA L+G + G +PLVV A+P++ G+
Sbjct: 68 AAAEALDGQLVLETGGQRKPLVVHFANPRRAPPGQ 102
>gi|322798581|gb|EFZ20185.1| hypothetical protein SINV_01390 [Solenopsis invicta]
Length = 523
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+++IR LF G V L +DK +GQ GY FV + E+A AI L
Sbjct: 29 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAINTL 88
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +FSPYG I
Sbjct: 89 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSR 143
Query: 212 IVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT +GS +P+ V+ A+
Sbjct: 144 ILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPITVKFAN 192
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 51/204 (25%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LYV+ +P+ ++D+ LF +G +I + D TG +G F++F EA AI+
Sbjct: 113 ANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQ 172
Query: 150 ALNGHYIFPGEQASIKVRFAD-------------------------GEREHPVA------ 178
LNG I G I V+FA+ G HP
Sbjct: 173 ELNGT-IPKGSSEPITVKFANNPSNNNKAIPPLAAYLAPQATRRFGGPIHHPTGRFRYSP 231
Query: 179 -----------PPDKL-------YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQ 219
P + + +V L+ +T + + ++F P+G ++ + ++RD + +
Sbjct: 232 LAGDLLANSMLPGNTMNGAGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNK 291
Query: 220 SRGCAFVQFSHREMALAAISGLNG 243
+G FV ++ E A+ AI LNG
Sbjct: 292 CKGFGFVTMTNYEEAVVAIQSLNG 315
>gi|255085602|ref|XP_002505232.1| predicted protein [Micromonas sp. RCC299]
gi|226520501|gb|ACO66490.1| predicted protein [Micromonas sp. RCC299]
Length = 211
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 96/186 (51%), Gaps = 18/186 (9%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEV-VLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
AKLYV +P T E + +F+ G V+++ V+P +R +G+ FV F+ EEA A
Sbjct: 33 AKLYVGHLPSTMNAERMLEMFKPFGRVLQIDVIPDRERQLSCKGFAFVLFSTPEEA-IAA 91
Query: 149 RALNGHYIFPGEQASIKVRFADGERE------HPVAPPD---KLYVGCLSKQTSKKEIEE 199
+ALNGH + E SI VR R PVAP + KLYV + +E++
Sbjct: 92 KALNGHVV---EGKSIDVRLKAEPRAPREPVNAPVAPVNDDAKLYVAYMPDHYRAEELKM 148
Query: 200 VFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
+ PYG D+ ++ D E +SRG F Q + A+AAI GLNG + LVVRI
Sbjct: 149 LLQPYGLPSDVRVITDRETGRSRGFGFAQMMDEQQAMAAIQGLNGQML---DGKTLVVRI 205
Query: 259 ADPKKP 264
A K P
Sbjct: 206 AGAKPP 211
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 83 INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFE 142
+ND AKLYVA +P E+++ L + +G +V + D+ TG+ +G+ F + +
Sbjct: 126 VNDD---AKLYVAYMPDHYRAEELKMLLQPYGLPSDVRVITDRETGRSRGFGFAQMMDEQ 182
Query: 143 EAGNAIRALNGHYIFPGEQASIKVRFA 169
+A AI+ LNG + + ++ VR A
Sbjct: 183 QAMAAIQGLNGQML---DGKTLVVRIA 206
>gi|347964852|ref|XP_309157.5| AGAP000965-PA [Anopheles gambiae str. PEST]
gi|333466508|gb|EAA04954.5| AGAP000965-PA [Anopheles gambiae str. PEST]
Length = 340
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T T+E+++ LF G+V L +DK TGQ GY FV + E+A AI
Sbjct: 29 LIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGQSLGYGFVNYHRPEDAEKAINTF 88
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK---LYVGCLSKQTSKKEIEEVFSPYGHIE 208
NG + + +IKV FA P + K LYV LSK +++++E +F+ YG I
Sbjct: 89 NGLRL---QNKTIKVSFA-----RPSSDAIKGANLYVSGLSKSMTQQDLENLFNAYGQII 140
Query: 209 DIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T +G+ +P+ V+ A+
Sbjct: 141 TSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGT-TPKGASEPITVKFAN 192
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 58/250 (23%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y + + + + FNG + K F P+ D I A LYV+ + ++ T++D+
Sbjct: 74 NYHRPEDAEKAINTFNGLRLQNKTIKVSFARPSSDAIKG----ANLYVSGLSKSMTQQDL 129
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKV 166
LF +G +I + D TG +G F++F EA AI+ LNG G I V
Sbjct: 130 ENLFNAYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTP-KGASEPITV 188
Query: 167 RFAD---------------------GEREHPVAPPDKL---------------------- 183
+FA+ R P P L
Sbjct: 189 KFANNPSNNINKAIPPLAAYLTPTPNLRRFPPGPIHPLSGRFSRYSPLTGDLGSSVLSAN 248
Query: 184 ---------YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREM 233
+V L+ +T + + ++F P+G ++ + +++D + + +G FV ++ +
Sbjct: 249 AINGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDE 308
Query: 234 ALAAISGLNG 243
A+ A+ LNG
Sbjct: 309 AVVAVQSLNG 318
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 114 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 173
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 174 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 228
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 229 ILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 282
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 365 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 424
Query: 242 NG 243
NG
Sbjct: 425 NG 426
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 114 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 173
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 174 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 228
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 229 ILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 282
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 365 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 424
Query: 242 NG 243
NG
Sbjct: 425 NG 426
>gi|194389144|dbj|BAG61589.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQF 228
++R S+GCAFV+F
Sbjct: 125 TVLRGPDGTSKGCAFVKF 142
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 180 PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALA 236
PD KL+VG + + +K+++ +F +G I ++ +++D+ +GCAF+ + R+ AL
Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63
Query: 237 AISGLNGTFTMRGSDQPLVVRIAD 260
A S L+ T+ G ++P+ V+ AD
Sbjct: 64 AQSALHEQKTLPGMNRPIQVKPAD 87
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 172 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 226
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 227 ILCDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 280
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 363 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 422
Query: 242 NG 243
NG
Sbjct: 423 NG 424
>gi|134026264|gb|AAI36135.1| ELAV (embryonic lethal, abnormal vision)-like 3 (Hu antigen C)
[Xenopus (Silurana) tropicalis]
Length = 342
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
+G G N A D L V +P+ T+E+ + LF G + L +DK TG
Sbjct: 20 VGILNGTNGAADDS------KTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG 73
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGC 187
Q GY FV + +A AI LNG + + +IKV +A R + D LYV
Sbjct: 74 QSLGYGFVNYVDPNDADKAINTLNGLKL---QTKTIKVSYA---RPSSASIRDANLYVSS 127
Query: 188 LSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFT 246
L K ++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG
Sbjct: 128 LPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP 187
Query: 247 MRGSDQPLVVRIADPKKPRTGE 268
+ G+ +P+ V+ A+ +TG+
Sbjct: 188 L-GASEPITVKFANNPSQKTGQ 208
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T ++++ LF ++G +I
Sbjct: 96 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSSLPKTMNQKEMEQLFSQYGRIITSR 151
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD---------- 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 152 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GASEPITVKFANNPSQKTGQAL 210
Query: 171 -------------GEREH-------------------------PVAPPDKLYVGCLSKQT 192
G H P ++V LS +
Sbjct: 211 LTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPEA 270
Query: 193 SKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
+ + ++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG R D
Sbjct: 271 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG---YRLGD 327
Query: 252 QPLVVRIADPKK 263
+ L V K+
Sbjct: 328 RVLQVSFKTSKQ 339
>gi|395729854|ref|XP_002810281.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 3
[Pongo abelii]
Length = 478
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCA---FVQFSHREMALAAISGLNGTFTMR 248
++R S+GCA + F HR + + + T +R
Sbjct: 125 TVLRGPDGTSKGCASFEILGFYHRHCKCSNLVFILLTLVLR 165
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISG 240
KL+VG + + +K+++ +F +G I ++ +++D+ +GCAF+ + R+ AL A S
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 241 LNGTFTMRGSDQPLVVRIAD 260
L+ T+ G ++P+ V+ AD
Sbjct: 68 LHEQKTLPGMNRPIQVKPAD 87
>gi|355755476|gb|EHH59223.1| Hu-antigen C, partial [Macaca fascicularis]
Length = 237
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 40 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 92 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 147
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 148 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 203
>gi|71896483|ref|NP_001025497.1| ELAV-like protein 3 [Xenopus (Silurana) tropicalis]
gi|123913100|sp|Q28FX0.1|ELAV3_XENTR RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|89266725|emb|CAJ83874.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Xenopus (Silurana) tropicalis]
Length = 343
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
+G G N A D L V +P+ T+E+ + LF G + L +DK TG
Sbjct: 20 VGILNGTNGAADDS------KTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG 73
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGC 187
Q GY FV + +A AI LNG + + +IKV +A R + D LYV
Sbjct: 74 QSLGYGFVNYVDPNDADKAINTLNGLKL---QTKTIKVSYA---RPSSASIRDANLYVSS 127
Query: 188 LSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ--SRGCAFVQFSHREMALAAISGLNGTF 245
L K ++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG
Sbjct: 128 LPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKGLNGQK 187
Query: 246 TMRGSDQPLVVRIADPKKPRTGE 268
+ G+ +P+ V+ A+ +TG+
Sbjct: 188 PL-GASEPITVKFANNPSQKTGQ 209
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++IR LF G V L +DK TGQ GY FV + E+A AI AL
Sbjct: 112 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 171
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LYV L K ++ ++E +FSPYG I
Sbjct: 172 NGLRL---QNKTIKVSIARPSSESIKGA--NLYVSGLPKNMTQSDLESLFSPYGKIITSR 226
Query: 212 IVRDELKQ------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T + S +P+ V+ A+
Sbjct: 227 ILCDNITGEHAAGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 280
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 363 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 422
Query: 242 NG 243
NG
Sbjct: 423 NG 424
>gi|47220048|emb|CAG12196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 38 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 97
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+K++E++FS YG I
Sbjct: 98 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 151
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 152 RILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 209
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++D+ LF ++G +I
Sbjct: 97 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKDMEQLFSQYGRIITSR 152
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 153 ILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFAN 201
>gi|325562875|gb|ADZ31336.1| cell size RNA recognition motif 1 [synthetic construct]
Length = 79
Score = 93.2 bits (230), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
DH N + KL++ VPRTATE+D+RPLFEEHG+V+EV L KD++TG+QQG CFVK+
Sbjct: 6 DHDNRNNY-VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYAT 64
Query: 141 FEEAGNAIRALNGHY 155
EEA AIRAL+ Y
Sbjct: 65 SEEAERAIRALHNQY 79
>gi|18463972|gb|AAL73053.1| HUC [Sphoeroides nephelus]
Length = 356
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 38 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 97
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+K++E++FS YG I
Sbjct: 98 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 151
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 152 RILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 209
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++D+ LF ++G +I
Sbjct: 97 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKDMEQLFSQYGRIITSR 152
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 153 ILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFAN 201
>gi|213623456|gb|AAI69769.1| ElrC protein [Xenopus laevis]
Length = 341
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
+G G N A D L V +P+ T+E+ + LF G + L +DK TG
Sbjct: 19 VGILNGTNGEADDS------KTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG 72
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGC 187
Q GY FV + +A AI LNG + + +IKV +A R + D LYV
Sbjct: 73 QSLGYGFVNYVDPNDADKAINTLNGLKL---QTKTIKVSYA---RPSSASIRDANLYVSS 126
Query: 188 LSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFT 246
L K ++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG
Sbjct: 127 LPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP 186
Query: 247 MRGSDQPLVVRIADPKKPRTGE 268
+ G+ +P+ V+ A+ +TG+
Sbjct: 187 L-GASEPITVKFANNPSQKTGQ 207
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T ++++ LF ++G +I
Sbjct: 95 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSSLPKTMNQKEMEQLFSQYGRIITSR 150
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD---------- 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 151 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GASEPITVKFANNPSQKTGQAL 209
Query: 171 -------------GEREH-------------------------PVAPPDKLYVGCLSKQT 192
G H P ++V LS +
Sbjct: 210 LTHLYQTTARRYTGPLHHQTQRFRFSPITIDSVTNLAGVSLTGPTTAGWCIFVYNLSPEA 269
Query: 193 SKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
+ + ++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG R D
Sbjct: 270 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG---YRLGD 326
Query: 252 QPLVVRIADPKK 263
+ L V K+
Sbjct: 327 RVLQVSFKTSKQ 338
>gi|109123517|ref|XP_001107360.1| PREDICTED: ELAV-like protein 3-like [Macaca mulatta]
gi|296232958|ref|XP_002761808.1| PREDICTED: ELAV-like protein 3 [Callithrix jacchus]
Length = 251
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 101 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 93 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 148
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 149 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 207
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
+ H + Y G L QT + ++ + + YG
Sbjct: 208 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 248
>gi|148224170|ref|NP_001084080.1| ELAV-like protein 3 [Xenopus laevis]
gi|82245647|sp|Q91584.1|ELAV3_XENLA RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|608541|gb|AAA96944.1| ribonucleoprotein [Xenopus laevis]
Length = 348
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 69 IGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG 128
+G G N A D L V +P+ T+E+ + LF G + L +DK TG
Sbjct: 19 VGILNGTNGEADDS------KTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG 72
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGC 187
Q GY FV + +A AI LNG + + +IKV +A R + D LYV
Sbjct: 73 QSLGYGFVNYVDPNDADKAINTLNGLKL---QTKTIKVSYA---RPSSASIRDANLYVSS 126
Query: 188 LSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFT 246
L K ++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG
Sbjct: 127 LPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP 186
Query: 247 MRGSDQPLVVRIADPKKPRTGE 268
+ G+ +P+ V+ A+ +TG+
Sbjct: 187 L-GASEPITVKFANNPSQKTGQ 207
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 100/259 (38%), Gaps = 64/259 (24%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T ++++ LF ++G +I
Sbjct: 95 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSSLPKTMNQKEMEQLFSQYGRIITSR 150
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------ 174
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ +
Sbjct: 151 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GASEPITVKFANNPSQKTGQAL 209
Query: 175 --HPVAPPDKLYVGCLSKQTSK-------------------------------------- 194
H + Y G L QT +
Sbjct: 210 LTHLYQTTARRYTGPLHHQTQRFSPLSILPRFSPITIDSVTNLAGVSLTGPTTAGWCIFV 269
Query: 195 ---------KEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGT 244
+ ++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 270 YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG- 328
Query: 245 FTMRGSDQPLVVRIADPKK 263
R D+ L V K+
Sbjct: 329 --YRLGDRVLQVSFKTSKQ 345
>gi|2204100|emb|CAB05395.1| FCA alpha 2 [Arabidopsis thaliana]
Length = 505
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 213 VRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGN 272
+RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+PK+P+ GE R
Sbjct: 1 MRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPKPGESRDM 60
Query: 273 YAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
GP F RP N G+S+G
Sbjct: 61 APPVGLGSGPRFQASGPRPTSNFGDSSG 88
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 422 VPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQ 469
P Q S +C W+EHT PDG KYYYN T ES+W+KPEE ++FE+
Sbjct: 341 APAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVFER 388
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+++IR LF G V L +DK +GQ GY FV + E+A AI L
Sbjct: 30 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +FSPYG I
Sbjct: 90 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSR 144
Query: 212 IVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT +GS +P+ V+ A+
Sbjct: 145 ILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPITVKFAN 193
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LYV+ +P+ ++D+ LF +G +I + D TG +G F++F EA AI+
Sbjct: 114 ANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQ 173
Query: 150 ALNGHYIFPGEQASIKVRFADG-EREHPVAPPDKLYV 185
LNG I G I V+FA+ + PP Y+
Sbjct: 174 ELNGT-IPKGSSEPITVKFANNPSNNNKAIPPLAAYL 209
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 278 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 337
Query: 242 NG 243
NG
Sbjct: 338 NG 339
>gi|432868074|ref|XP_004071398.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oryzias latipes]
Length = 359
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 40 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+K++E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++D+ LF ++G +I
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKDMEQLFSQYGRIITSR 154
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 155 ILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFAN 203
>gi|348509181|ref|XP_003442130.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oreochromis
niloticus]
gi|410902663|ref|XP_003964813.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Takifugu rubripes]
gi|432868072|ref|XP_004071397.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oryzias latipes]
Length = 345
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 40 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+K++E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 54/232 (23%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++D+ LF ++G +I
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKDMEQLFSQYGRIITSR 154
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD---------- 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 155 ILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 213
Query: 171 -------------GEREH-------------------------PVAPPDKLYVGCLSKQT 192
G H P ++V LS +
Sbjct: 214 LTQLYQTAARRYTGPLHHQTQRFRFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPEA 273
Query: 193 SKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+ + ++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 274 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 325
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T TE++IR LF G + V L +DK GQ GY FV + ++A A+ L
Sbjct: 147 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGYGFVNYVRPQDAEQAVNVL 206
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK---LYVGCLSKQTSKKEIEEVFSPYGHIE 208
NG + + +IKV FA P + K LYV L K +++E+E +F+P+G I
Sbjct: 207 NGLRL---QNKTIKVSFA-----RPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAII 258
Query: 209 DIFIVRDELK--QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+++ Q++G F++F RE A AI LNGT +D P+VV+ ++
Sbjct: 259 TSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTD-PIVVKFSN 311
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y Q + + + NG + K F P+ D I A LYV+ +P+T T++++
Sbjct: 192 NYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKG----ANLYVSGLPKTMTQQEL 247
Query: 107 RPLFEEHGNVIEV-VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNG 153
+F G +I +L Q +G F++F EEA AI ALNG
Sbjct: 248 EAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 295
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 103 EEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
E + LF G V V + KD T Q +GY FV T ++EA AIRALNG+ +
Sbjct: 398 EAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTM 451
>gi|307194503|gb|EFN76795.1| ELAV-like protein 2 [Harpegnathos saltator]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+++IR LF G V L +DK +GQ GY FV + E+A AI L
Sbjct: 29 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAISTL 88
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +FSPYG I
Sbjct: 89 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSR 143
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT +GS +P+ V+ A+
Sbjct: 144 ILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPITVKFAN 192
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LYV+ +P+ ++D+ LF +G +I + D TG +G F++F EA AI+
Sbjct: 113 ANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQ 172
Query: 150 ALNGHYIFPGEQASIKVRFADG-EREHPVAPPDKLYV 185
LNG I G I V+FA+ + PP Y+
Sbjct: 173 ELNGT-IPKGSSEPITVKFANNPSNNNKAIPPLAAYL 208
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 268 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 327
Query: 242 NG 243
NG
Sbjct: 328 NG 329
>gi|281337375|gb|EFB12959.1| hypothetical protein PANDA_010283 [Ailuropoda melanoleuca]
Length = 369
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 38 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 97
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 98 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 151
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 152 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 209
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 97 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 152
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 153 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 201
>gi|440910150|gb|ELR59976.1| ELAV-like protein 3, partial [Bos grunniens mutus]
Length = 373
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 40 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 154
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 155 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 203
>gi|348509183|ref|XP_003442131.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oreochromis
niloticus]
Length = 359
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 40 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+K++E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ--SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++D+ LF ++G +I
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKDMEQLFSQYGRIITSR 154
Query: 121 LPKDKRT-GQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ T G +G F++F EA AI+ LNG G I V+FA+
Sbjct: 155 ILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFAN 204
>gi|410902665|ref|XP_003964814.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 40 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+K++E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++D+ LF ++G +I
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKDMEQLFSQYGRIITSR 154
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 155 ILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFAN 203
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P++ TE+D+ LF G V + KD +TG G+ FV + E+A AI L
Sbjct: 87 LIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 146
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++ +I+++FS YG+I
Sbjct: 147 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITESQIDDIFSKYGNIVQKN 201
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I++D+L RG AFV+F RE A AI+ L+GT GS+ PL V+IA+
Sbjct: 202 ILKDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSE-PLSVKIAE 250
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE I +F ++GN+++ + KDK TG +
Sbjct: 157 KVSFARPSGEEIKET----NLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPR 212
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV+F EEA AI L+G
Sbjct: 213 GVAFVRFDKREEAQEAIARLHG 234
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P++ TE+D+ LF G V + KD +TG G+ FV + E+A AI L
Sbjct: 87 LIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 146
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++ +I+++FS YG+I
Sbjct: 147 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITESQIDDIFSKYGNIVQKN 201
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I++D+L RG AFV+F RE A AI+ L+GT GS+ PL V+IA+
Sbjct: 202 ILKDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSE-PLSVKIAE 250
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE I +F ++GN+++ + KDK TG +
Sbjct: 157 KVSFARPSGEEIKET----NLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPR 212
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV+F EEA AI L+G
Sbjct: 213 GVAFVRFDKREEAQEAIARLHG 234
>gi|345787182|ref|XP_542056.3| PREDICTED: ELAV-like protein 3 [Canis lupus familiaris]
Length = 647
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 328 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 387
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 388 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 441
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 442 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 499
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T +++++ LF ++G +I + D+ TG +
Sbjct: 398 KVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSR 453
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE--------HPVAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + H +
Sbjct: 454 GVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQALLTHLYQSSARR 512
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L QT + ++ + FSP
Sbjct: 513 YAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLS 572
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 573 PEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 627
>gi|195347400|ref|XP_002040241.1| GM19036 [Drosophila sechellia]
gi|195564435|ref|XP_002105824.1| GD16475 [Drosophila simulans]
gi|194121669|gb|EDW43712.1| GM19036 [Drosophila sechellia]
gi|194203185|gb|EDX16761.1| GD16475 [Drosophila simulans]
Length = 466
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T TE++IR LF G + V L +DK GQ GY FV + ++A A+ L
Sbjct: 147 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGYGFVNYVRPQDAEQAVNVL 206
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK---LYVGCLSKQTSKKEIEEVFSPYGHIE 208
NG + + +IKV FA P + K LYV L K +++E+E +F+P+G I
Sbjct: 207 NGLRL---QNKTIKVSFA-----RPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAII 258
Query: 209 DIFIVRDELK--QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+++ Q++G F++F RE A AI LNGT +D P+VV+ ++
Sbjct: 259 TSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTD-PIVVKFSN 311
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y Q + + + NG + K F P+ D I A LYV+ +P+T T++++
Sbjct: 192 NYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKG----ANLYVSGLPKTMTQQEL 247
Query: 107 RPLFEEHGNVIEV-VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNG 153
+F G +I +L Q +G F++F EEA AI ALNG
Sbjct: 248 EAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 295
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 103 EEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
E + LF G V V + KD T Q +GY FV T ++EA AIRALNG+ +
Sbjct: 398 EAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTM 451
>gi|186511883|ref|NP_849542.2| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658327|gb|AEE83727.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 505
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 213 VRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGN 272
+RDE +QSRGC FV++S +E A+AAI GLNGT+TMRG +QPL+VR A+PK+P+ GE R
Sbjct: 1 MRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPKPGESREM 60
Query: 273 YAFGTPSFGPNF-LEPVRPPPNLGNSAG 299
GP F RP N G+S+G
Sbjct: 61 APPVGLGSGPRFQASGPRPTSNFGDSSG 88
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 422 VPQSPQVAASPECDWSEHTCPDGNKYYYNCETCESRWDKPEEYLLFEQ 469
P Q S +C W+EHT PDG KYYYN T ES+W+KPEE ++FE+
Sbjct: 341 APAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVFER 388
>gi|40807107|gb|AAH65343.1| Elavl3 protein [Danio rerio]
Length = 359
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 40 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+K++E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ--SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++D+ LF ++G +I
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKDMEQLFSQYGRIITSR 154
Query: 121 LPKDKRT-GQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ T G +G F++F EA AI+ LNG G I V+FA+
Sbjct: 155 ILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFAN 204
>gi|334321532|ref|XP_003340124.1| PREDICTED: ELAV-like protein 4 isoform 2 [Monodelphis domestica]
Length = 347
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 11/191 (5%)
Query: 74 GFNHPAPDHINDSGIPAK--LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
G N P+P + +K L V +P+ T+E+ R LF G + L +DK TGQ
Sbjct: 21 GRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSL 80
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSK 190
GY FV + ++A AI LNG + + +IKV +A R + D LYV L K
Sbjct: 81 GYGFVNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPK 134
Query: 191 QTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRG 249
++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG G
Sbjct: 135 TMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSG 193
Query: 250 SDQPLVVRIAD 260
+ +P+ V+ A+
Sbjct: 194 ATEPITVKFAN 204
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKTSQALLSQLYQSPNRR 225
Query: 184 YVG------------------------------------C-----LSKQTSKKEIEEVFS 202
Y G C LS + + + ++F
Sbjct: 226 YPGPLHHQAQRFSRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFG 285
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
>gi|410950486|ref|XP_003981936.1| PREDICTED: ELAV-like protein 3 isoform 1 [Felis catus]
gi|431918945|gb|ELK17812.1| ELAV-like protein 3 [Pteropus alecto]
Length = 352
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 33 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 92
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 93 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 146
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 147 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 204
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 68/246 (27%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 92 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 147
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------ 174
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ +
Sbjct: 148 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 206
Query: 175 --HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP-------------------- 203
H + Y G L QT + ++ + FSP
Sbjct: 207 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAG 266
Query: 204 -------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAA 237
+G + ++ ++RD + +G FV ++ + A A
Sbjct: 267 AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 326
Query: 238 ISGLNG 243
I+ LNG
Sbjct: 327 IASLNG 332
>gi|426387251|ref|XP_004060087.1| PREDICTED: ELAV-like protein 3 isoform 1 [Gorilla gorilla gorilla]
gi|355703162|gb|EHH29653.1| Hu-antigen C [Macaca mulatta]
Length = 339
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 33 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 92
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 93 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 146
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 147 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 204
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 55/233 (23%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 92 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 147
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD------GE-- 172
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ G+
Sbjct: 148 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 206
Query: 173 -----------------------REHPVAPPDK------------------LYVGCLSKQ 191
R P+A ++V LS +
Sbjct: 207 LTHLYQSSARRYAGPLHHQTQRFRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPE 266
Query: 192 TSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+ + ++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 267 ADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 319
>gi|170028363|ref|XP_001842065.1| RNA-binding protein [Culex quinquefasciatus]
gi|167874220|gb|EDS37603.1| RNA-binding protein [Culex quinquefasciatus]
Length = 365
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+IR LF G V L +DK TGQ GY FV + E+A AI L
Sbjct: 46 LIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYQRAEDASKAINTL 105
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + IKV FA E LYV L K + ++E +FSPYG I
Sbjct: 106 NGLRL---QNKQIKVSFARPSSE--AIKGANLYVSGLPKNMLQSDLESLFSPYGRIITSR 160
Query: 212 IVRDELKQ--------------SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
I+ D + S+G F++F R A AI LNGT +GS +P+ V+
Sbjct: 161 ILCDNITARQYASASGEVSPGLSKGVGFIRFDQRTEAEKAIKELNGTIP-KGSTEPITVK 219
Query: 258 IAD 260
A+
Sbjct: 220 FAN 222
>gi|359067089|ref|XP_002688919.2| PREDICTED: ELAV-like protein 3 [Bos taurus]
Length = 408
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 89 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 148
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 149 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 202
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 203 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 260
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 148 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 203
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 204 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 252
>gi|444724379|gb|ELW64984.1| CUGBP Elav-like family member 2 [Tupaia chinensis]
Length = 585
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 27/209 (12%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+ P PD I K++V +PR+ +E++++ LFE +G V ++ + +D+ Q
Sbjct: 93 DQPDPDAI-------KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGL 145
Query: 136 ------VKFTIFEEAGNA----------IRAL---NGHYIFPGEQASIKVRFADGEREHP 176
++ + G + IR+L +G I+++ AD E+ +
Sbjct: 146 KSEPQKLELEALSKCGLSDPSKAFGMALIRSLTDIDGSKKKDKMHHPIQMKPADSEKSNA 205
Query: 177 VAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALA 236
V KL++G +SK+ ++ +I +FSP+G IE+ I+R SRGCAFV FS R MA
Sbjct: 206 V-EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQN 264
Query: 237 AISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AI ++ + TM G P+VV+ AD +K +
Sbjct: 265 AIKAMHQSQTMEGCSSPIVVKFADTQKDK 293
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 170 DGEREHPVAP-PD--KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE 216
+G +H P PD K++VG + + S+KE++E+F PYG + I ++RD
Sbjct: 86 NGALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDR 135
>gi|149020435|gb|EDL78240.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 101 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D+ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 155 RILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 93 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 148
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 149 GRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 207
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
+ H + Y G L QT + ++ + + YG
Sbjct: 208 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 248
>gi|542846|pir||JC2116 hippocampal 38K autoantigen protein - human
gi|2340828|dbj|BAA21838.1| PLE21 protein [Homo sapiens]
Length = 350
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 32 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 91
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 92 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 145
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 146 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAREPITVKFANNPSQKTGQ 203
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 98/252 (38%), Gaps = 67/252 (26%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 84 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 139
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G + I V+FA+
Sbjct: 140 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAREPITVKFANNPS 198
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEVFS----------------------- 202
+ H + Y G L QT + ++ + +
Sbjct: 199 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYAVKRFSPIAIDGMSGLAGVG 258
Query: 203 ------------------------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHR 231
P+G + ++ ++RD + +G F+ ++
Sbjct: 259 LSGGAAGGWCIFVYNLSPEPDQSVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFMTMTNY 318
Query: 232 EMALAAISGLNG 243
+ A AI+ LNG
Sbjct: 319 DEAAMAIASLNG 330
>gi|426387255|ref|XP_004060089.1| PREDICTED: ELAV-like protein 3 isoform 3 [Gorilla gorilla gorilla]
Length = 346
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 33 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 92
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 93 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 146
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 147 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 204
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 92 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 147
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 148 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 196
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+ ++ LF G + + KD +TG GY FV F +A NAI++L
Sbjct: 87 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSL 146
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + +KV +A E LYV L + + E+E++F YG+I
Sbjct: 147 NGVTV---RNKRLKVSYARPGGES--IKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKN 201
Query: 212 IVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L + RG AFV+F+ RE A AIS LN G+ QPL VR+A+
Sbjct: 202 ILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIP-EGASQPLTVRLAE 250
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P + I D+ LYV +PRT T++++ +F ++GN+++ + +DK TG+ +
Sbjct: 157 KVSYARPGGESIKDT----NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPR 212
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV+F EEA AI ALN + I G + VR A+
Sbjct: 213 GVAFVRFNKREEAQEAISALN-NVIPEGASQPLTVRLAE 250
>gi|403302354|ref|XP_003941825.1| PREDICTED: ELAV-like protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 352
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 33 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 92
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 93 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 146
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 147 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 204
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 68/246 (27%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 92 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 147
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------ 174
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ +
Sbjct: 148 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 206
Query: 175 --HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP-------------------- 203
H + Y G L QT + ++ + FSP
Sbjct: 207 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAG 266
Query: 204 -------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAA 237
+G + ++ ++RD + +G FV ++ + A A
Sbjct: 267 AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 326
Query: 238 ISGLNG 243
I+ LNG
Sbjct: 327 IASLNG 332
>gi|301771944|ref|XP_002921434.1| PREDICTED: ELAV-like protein 3-like [Ailuropoda melanoleuca]
Length = 350
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 44 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 103
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 104 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 157
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 158 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 215
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 55/233 (23%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 103 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 158
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD------GE-- 172
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ G+
Sbjct: 159 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 217
Query: 173 -----------------------REHPVAPPDK------------------LYVGCLSKQ 191
R P+A ++V LS +
Sbjct: 218 LTHLYQSSARRYAGPLHHQTQRFRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPE 277
Query: 192 TSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+ + ++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 278 ADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 330
>gi|338727192|ref|XP_001916382.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Equus
caballus]
Length = 345
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 44 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 103
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 104 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 157
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 158 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 215
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 103 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 158
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 159 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 207
>gi|294886537|ref|XP_002771747.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239875509|gb|EER03563.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 422
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 34/216 (15%)
Query: 79 APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKF 138
A D + + + KL+V +P E D+R +FEE+G V +V + +D+ T Q +G FV+F
Sbjct: 5 AADRMESTSV--KLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAFVRF 62
Query: 139 TIFEEAGNAIRALNGHYI--------------------FPGEQASIKVRFADGEREH--- 175
AI+ALNGH + F + V A GE E
Sbjct: 63 RDIPSGMAAIKALNGHRLSHNTSTSCIDNDVESVDDMSFDQSHIPLSVSLAQGEAERLGM 122
Query: 176 -----PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
KL+V L T ++E+ +F P+G I ++ + AFV+F+
Sbjct: 123 HGEVVATGGDTKLFVSGLGPATQEEELRTIFEPFGRINEVHVPGPHAL----YAFVRFAE 178
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
+E AL AI +NG T+ GS +PL V++A+ + +
Sbjct: 179 KEDALKAIREVNGRVTVEGSQRPLEVKVAESRAAKA 214
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A ++V VP TE+D+R F GN++ + DK TG +GY F+ + + AG A+
Sbjct: 324 ANVFVFSVPDAWTEDDLRDHFSSFGNIVSAKVVVDKHTGLSRGYGFISYDNAQSAGRAVA 383
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPV 177
+NG G + IKV+ GE + V
Sbjct: 384 EMNGFVAANGRR--IKVQIKKGEEDAAV 409
>gi|148693298|gb|EDL25245.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Mus musculus]
Length = 250
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 40 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D+ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 92 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 147
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 148 GRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 206
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
+ H + Y G L QT + ++ + + YG
Sbjct: 207 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 247
>gi|426387253|ref|XP_004060088.1| PREDICTED: ELAV-like protein 3 isoform 2 [Gorilla gorilla gorilla]
Length = 366
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 33 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 92
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 93 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 146
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 147 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 204
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 92 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 147
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------ 174
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ +
Sbjct: 148 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 206
Query: 175 --HPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
H + Y G L QT + ++ + + YG
Sbjct: 207 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 240
>gi|345493621|ref|XP_003427111.1| PREDICTED: ELAV-like protein 3-like isoform 3 [Nasonia vitripennis]
gi|345493623|ref|XP_001603257.2| PREDICTED: ELAV-like protein 3-like isoform 1 [Nasonia vitripennis]
Length = 349
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 20/183 (10%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T T+E+IR LF G V L +DK TGQ GY FV + E+A AI L
Sbjct: 30 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +FSPYG I
Sbjct: 90 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSR 144
Query: 212 IVRDELK--------------QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
I+ D + S+G F++F R A AI LNGT +GS +P+ V+
Sbjct: 145 ILCDNITVRQFVTGGGDNLPGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSTEPITVK 203
Query: 258 IAD 260
A+
Sbjct: 204 FAN 206
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 64/217 (29%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT-------------GQQQGYCFV 136
A LYV+ +P+ T++D+ LF +G +I + D T G +G F+
Sbjct: 114 ANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDNLPGLSKGVGFI 173
Query: 137 KFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD-------------------------G 171
+F EA AI+ LNG I G I V+FA+ G
Sbjct: 174 RFDQRVEAERAIQELNGT-IPKGSTEPITVKFANNPSNNNKAIPPLAAYLTPQATRRFGG 232
Query: 172 EREHPVA-----------------PPDKL-------YVGCLSKQTSKKEIEEVFSPYGHI 207
HP P + + +V L+ +T + + ++F P+G +
Sbjct: 233 PIHHPTGRFRYSPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAV 292
Query: 208 EDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+ + ++RD + + +G FV ++ E A+ AI LNG
Sbjct: 293 QSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNG 329
>gi|49355765|ref|NP_115657.2| ELAV-like protein 3 isoform 2 [Homo sapiens]
gi|119604627|gb|EAW84221.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Homo sapiens]
gi|261861050|dbj|BAI47047.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3
[synthetic construct]
gi|380783931|gb|AFE63841.1| ELAV-like protein 3 isoform 2 [Macaca mulatta]
Length = 360
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 101 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 98/253 (38%), Gaps = 68/253 (26%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 93 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 148
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 149 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 207
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP------------- 203
+ H + Y G L QT + ++ + FSP
Sbjct: 208 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVG 267
Query: 204 --------------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSH 230
+G + ++ ++RD + +G FV ++
Sbjct: 268 LSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 327
Query: 231 REMALAAISGLNG 243
+ A AI+ LNG
Sbjct: 328 YDEAAMAIASLNG 340
>gi|444525484|gb|ELV14031.1| ELAV-like protein 3 [Tupaia chinensis]
Length = 332
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 33 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAISTL 92
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 93 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 146
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 147 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 204
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 92 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 147
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------ 174
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ +
Sbjct: 148 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 206
Query: 175 --HPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
H + Y G L QT + ++ + + YG
Sbjct: 207 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 240
>gi|49355761|ref|NP_001411.2| ELAV-like protein 3 isoform 1 [Homo sapiens]
gi|21264436|sp|Q14576.3|ELAV3_HUMAN RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC; AltName: Full=Paraneoplastic cerebellar
degeneration-associated antigen; AltName:
Full=Paraneoplastic limbic encephalitis antigen 21
gi|119604626|gb|EAW84220.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Homo sapiens]
gi|380783929|gb|AFE63840.1| ELAV-like protein 3 isoform 1 [Macaca mulatta]
Length = 367
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 101 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 100 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 155
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------ 174
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ +
Sbjct: 156 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 214
Query: 175 --HPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
H + Y G L QT + ++ + + YG
Sbjct: 215 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 248
>gi|334348392|ref|XP_001367508.2| PREDICTED: CUGBP Elav-like family member 2-like [Monodelphis
domestica]
Length = 575
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
CFV F + A A AL+ PG I+++ AD E+ + V KL++G +SK+ +
Sbjct: 147 CFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAV-EDRKLFIGMVSKKCN 205
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
+ +I +FSP+G IE+ I+R SRGCAFV FS R MA AI ++ + TM G P
Sbjct: 206 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKTMHQSQTMEGCSSP 265
Query: 254 LVVRIADPKKPR 265
+VV+ AD +K +
Sbjct: 266 IVVKFADTQKDK 277
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ V + E DIR +F G + E + + G +G FV F+ A NAI+
Sbjct: 194 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPD-GLSRGCAFVTFSTRAMAQNAIKT 252
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
++ G + I V+FAD +++
Sbjct: 253 MHQSQTMEGCSSPIVVKFADTQKD 276
>gi|296485880|tpg|DAA27995.1| TPA: ELAV-like protein 3-like [Bos taurus]
Length = 407
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 88 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 147
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 148 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 201
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 202 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 259
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 147 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 202
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 203 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 251
>gi|395850849|ref|XP_003797986.1| PREDICTED: ELAV-like protein 3 isoform 2 [Otolemur garnettii]
gi|402904299|ref|XP_003914984.1| PREDICTED: ELAV-like protein 3 isoform 2 [Papio anubis]
Length = 359
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 40 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 98/253 (38%), Gaps = 68/253 (26%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 92 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 147
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 148 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 206
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP------------- 203
+ H + Y G L QT + ++ + FSP
Sbjct: 207 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVG 266
Query: 204 --------------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSH 230
+G + ++ ++RD + +G FV ++
Sbjct: 267 LSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 326
Query: 231 REMALAAISGLNG 243
+ A AI+ LNG
Sbjct: 327 YDEAAMAIASLNG 339
>gi|344283287|ref|XP_003413403.1| PREDICTED: ELAV-like protein 3 [Loxodonta africana]
Length = 360
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 101 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 98/253 (38%), Gaps = 68/253 (26%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 93 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 148
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 149 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 207
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP------------- 203
+ H + Y G L QT + ++ + FSP
Sbjct: 208 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVG 267
Query: 204 --------------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSH 230
+G + ++ ++RD + +G FV ++
Sbjct: 268 LSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 327
Query: 231 REMALAAISGLNG 243
+ A AI+ LNG
Sbjct: 328 YDEAAMAIASLNG 340
>gi|426229023|ref|XP_004008593.1| PREDICTED: ELAV-like protein 3 isoform 1 [Ovis aries]
Length = 359
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 40 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 154
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 155 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 203
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 11/172 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+ ++ LF G + + KD +TG GY FV F +A NAI++L
Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSL 163
Query: 152 NGHYIFPGEQASIKVRFA--DGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
NG + +KV +A GE LYV L + + E+E++F YG+I
Sbjct: 164 NGVTV---RNKRLKVSYARPGGES----IKDTNLYVTNLPRTITDDELEKIFGKYGNIVQ 216
Query: 210 IFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L + RG AFV+F+ RE A AIS LN G+ QPL VR+A+
Sbjct: 217 KNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIP-EGASQPLTVRLAE 267
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P + I D+ LYV +PRT T++++ +F ++GN+++ + +DK TG+ +
Sbjct: 174 KVSYARPGGESIKDT----NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPR 229
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV+F EEA AI ALN + I G + VR A+
Sbjct: 230 GVAFVRFNKREEAQEAISALN-NVIPEGASQPLTVRLAE 267
>gi|334321530|ref|XP_001373647.2| PREDICTED: ELAV-like protein 4 isoform 1 [Monodelphis domestica]
Length = 366
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 11/191 (5%)
Query: 74 GFNHPAPDHINDSGIPAK--LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
G N P+P + +K L V +P+ T+E+ R LF G + L +DK TGQ
Sbjct: 28 GRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSL 87
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSK 190
GY FV + ++A AI LNG + + +IKV +A R + D LYV L K
Sbjct: 88 GYGFVNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPK 141
Query: 191 QTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRG 249
++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG G
Sbjct: 142 TMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSG 200
Query: 250 SDQPLVVRIAD 260
+ +P+ V+ A+
Sbjct: 201 ATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKTSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P++ TE+D+ LF G V + KD +TG G+ FV + E+A AI L
Sbjct: 87 LIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 146
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++ +I+++FS YG+I
Sbjct: 147 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITESQIDDIFSKYGNIVQKN 201
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I++D+L RG AFV+F RE A AI+ L+GT GS+ PL V+IA+
Sbjct: 202 ILKDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSE-PLSVKIAE 250
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE I +F ++GN+++ + KDK TG +
Sbjct: 157 KVSFARPSGEEIKET----NLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPR 212
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV+F EEA AI L+G
Sbjct: 213 GVAFVRFDKREEAQEAIARLHG 234
>gi|358412972|ref|XP_887465.4| PREDICTED: ELAV-like protein 3 isoform 8 [Bos taurus]
Length = 511
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 192 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 251
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK-LYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 252 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 305
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 306 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 363
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T +++++ LF ++G +I + D+ TG +
Sbjct: 262 KVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSR 317
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 318 GVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 355
>gi|311248628|ref|XP_003123218.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Sus
scrofa]
Length = 359
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 40 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 98/253 (38%), Gaps = 68/253 (26%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 92 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 147
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 148 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 206
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP------------- 203
+ H + Y G L QT + ++ + FSP
Sbjct: 207 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVG 266
Query: 204 --------------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSH 230
+G + ++ ++RD + +G FV ++
Sbjct: 267 LSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 326
Query: 231 REMALAAISGLNG 243
+ A AI+ LNG
Sbjct: 327 YDEAAMAIASLNG 339
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 92/170 (54%), Gaps = 9/170 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P++ TEE++R LF G + L +D+ TGQ GY F+ + +A A+ L
Sbjct: 505 LIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRVTGQSLGYGFIDYVHPRDAERAVCLL 564
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK-LYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG P +IKV +A R + + D LY+ L K ++KE+E +FSPYGHI
Sbjct: 565 NGLQCPPK---TIKVSYA---RPNSSSIRDANLYINGLPKNMTQKELEHLFSPYGHIITS 618
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
I+ D+ SRG F++F+ + A AI LNG G +PLVVR A
Sbjct: 619 RILTDKASGTSRGVGFIRFNMKSEAEEAIKALNGQKPC-GILEPLVVRFA 667
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 60 FFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV 119
NG P K + P I D A LY+ +P+ T++++ LF +G++I
Sbjct: 563 LLNGLQCPPKTIKVSYARPNSSSIRD----ANLYINGLPKNMTQKELEHLFSPYGHIITS 618
Query: 120 VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+ DK +G +G F++F + EA AI+ALNG G + VRFA + +
Sbjct: 619 RILTDKASGTSRGVGFIRFNMKSEAEEAIKALNGQKPC-GILEPLVVRFAHNQTQ 672
>gi|198425734|ref|XP_002119812.1| PREDICTED: similar to HUC, partial [Ciona intestinalis]
Length = 408
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 16/197 (8%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T ++++ LF G V + +DK++G GY FV + E+A AI+ L
Sbjct: 85 LIVNYLPQTLSDQEFYQLFNNVGAVTSARIIRDKQSGYSFGYGFVDYVKPEDADKAIQQL 144
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK---LYVGCLSKQTSKKEIEEVFSPYGHIE 208
NGH P + +IKV F+ P K LYV L+ TS++ +++ FS YG I
Sbjct: 145 NGH---PIQHKTIKVAFS-----KPAGADSKNINLYVAGLNPDTSEESLKQRFSSYGTII 196
Query: 209 DIFIVRDE-LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA--DPKKPR 265
+++D+ G FV F+ ++ A+AAI LNG + S PLVV+ A D K P
Sbjct: 197 QTRVLKDKNTNLCSGIGFVLFNTKDEAMAAIKALNGAVFSQASTSPLVVKFAKTDQKVPD 256
Query: 266 TGELRGNYAFGTPSFGP 282
+ + GNY G GP
Sbjct: 257 SFQ-GGNYQ-GKTGGGP 271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 61 FNGQPMPFIGRKRGFNHPA-PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEV 119
NG P+ K F+ PA D N LYVA + +EE ++ F +G +I+
Sbjct: 144 LNGHPIQHKTIKVAFSKPAGADSKN-----INLYVAGLNPDTSEESLKQRFSSYGTIIQT 198
Query: 120 VLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP 176
+ KDK T G FV F +EA AI+ALNG + + V+FA +++ P
Sbjct: 199 RVLKDKNTNLCSGIGFVLFNTKDEAMAAIKALNGAVFSQASTSPLVVKFAKTDQKVP 255
>gi|348554579|ref|XP_003463103.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cavia porcellus]
Length = 347
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 204
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 225
Query: 184 YVG------------------------------------C-----LSKQTSKKEIEEVFS 202
Y G C LS + + + ++F
Sbjct: 226 YPGPLHHQAQRFSRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFG 285
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 158 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 217
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 218 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 271
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 272 RILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGAAEPITVKFAN 321
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 228 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSR 283
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 284 GVGFIRFDKRIEAEEAIKGLNGQKP-SGAAEPITVKFANNPSQKTSQALLSQLYQSPNRR 342
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 343 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDSMTSLVGMNIPGHTGTGWCIFVYNLSP 402
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 403 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 456
>gi|254281259|ref|NP_001156869.1| ELAV-like protein 4 isoform c [Mus musculus]
Length = 356
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 51 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 111 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 164
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 165 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 214
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 121 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 176
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 177 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 235
Query: 184 YVG-----------------------------------C-----LSKQTSKKEIEEVFSP 203
Y G C LS + + + ++F P
Sbjct: 236 YPGPLHHQAQRFRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGP 295
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 296 FGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 336
>gi|390465924|ref|XP_002750851.2| PREDICTED: ELAV-like protein 4 isoform 1 [Callithrix jacchus]
Length = 366
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|355745275|gb|EHH49900.1| hypothetical protein EGM_00635 [Macaca fascicularis]
Length = 289
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 124
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 125 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 178
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 179 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 228
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 124 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 179
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 180 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 228
>gi|390465918|ref|XP_003733489.1| PREDICTED: ELAV-like protein 4 isoform 2 [Callithrix jacchus]
gi|403258117|ref|XP_003921625.1| PREDICTED: ELAV-like protein 4 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 371
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 237
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 238 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 297
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 298 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T+E++R LF G + L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FSP+G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSPFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSPFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEASMAIASLNG 307
>gi|221316771|ref|NP_001138248.1| ELAV-like protein 4 isoform 4 [Homo sapiens]
gi|114556460|ref|XP_001135439.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 8 [Pan troglodytes]
gi|332219809|ref|XP_003259050.1| PREDICTED: ELAV-like protein 4 isoform 5 [Nomascus leucogenys]
gi|395855043|ref|XP_003799981.1| PREDICTED: ELAV-like protein 4 isoform 4 [Otolemur garnettii]
gi|397518910|ref|XP_003829618.1| PREDICTED: ELAV-like protein 4 isoform 5 [Pan paniscus]
gi|402854511|ref|XP_003891911.1| PREDICTED: ELAV-like protein 4 isoform 5 [Papio anubis]
gi|426329581|ref|XP_004025817.1| PREDICTED: ELAV-like protein 4 isoform 5 [Gorilla gorilla gorilla]
gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens]
Length = 366
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|340383573|ref|XP_003390291.1| PREDICTED: protein alan shepard-like, partial [Amphimedon
queenslandica]
Length = 443
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 23/247 (9%)
Query: 35 NFPDNYHSHHRRHYQYDQMSSEPTDFFNGQPMPFIGRKRGFNH---PAPDH-INDSGIPA 90
+ P +HS QY ++ P +++ Q P + FN P P H + + P
Sbjct: 108 SLPMMFHSMPTLQPQY--IAPNPYNYYYQQQTPALAVPGLFNGGVGPLPIHELPEDDEPP 165
Query: 91 K----LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGN 146
K LY+ + T+ED+R + E++G + DK+TGQ +GY FV F+ E +
Sbjct: 166 KSTSNLYIRGLSDNCTDEDLRKMCEKYGTINSTKSILDKKTGQCKGYGFVDFS---EEAD 222
Query: 147 AIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGH 206
A++AL + V+FA + E P LY+ L K S+K++E++ SPYG
Sbjct: 223 ALKALESL-----QAIGTDVQFARRQEEDPT----NLYLSNLPKYYSEKDLEKLLSPYGR 273
Query: 207 IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
I ++R+ SRG FV+ RE A LN T G+D L ++ AD +
Sbjct: 274 IISTRVLREPSGYSRGVGFVRLDSRENCEKAREALNNTI-FPGTDLELNIKFADSGNYKR 332
Query: 267 GELRGNY 273
+R Y
Sbjct: 333 KSIRLTY 339
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 120 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 179
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 180 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 233
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 234 RILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGAAEPITVKFAN 283
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 190 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSR 245
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 246 GVGFIRFDKRIEAEEAIKGLNGQKP-SGAAEPITVKFANNPSQKTSQALLSQLYQSPNRR 304
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L Q + ++ + FSP
Sbjct: 305 YPGPLHHQAQRFRLDNLLNMAYGVKSRFSPITIDSMTSLVGMNIPGHTGTGWCIFVYNLS 364
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 365 PDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 419
>gi|2801552|gb|AAC40080.1| RNA binding protein Elavl4 [Mus musculus]
Length = 346
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 204
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 225
Query: 184 YVG-----------------------------------C-----LSKQTSKKEIEEVFSP 203
Y G C LS + + + ++F P
Sbjct: 226 YPGPLHHQAQRFRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGP 285
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 FGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
>gi|45382273|ref|NP_990161.1| ELAV-like protein 4 [Gallus gallus]
gi|5739519|gb|AAD50508.1|AF176675_1 RNA-binding protein HuD [Gallus gallus]
Length = 371
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 216
>gi|344240064|gb|EGV96167.1| ELAV-like protein 3 [Cricetulus griseus]
Length = 352
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 33 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 92
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 93 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 146
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D+ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 147 RILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 204
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 68/246 (27%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 92 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 147
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------ 174
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ +
Sbjct: 148 ILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 206
Query: 175 --HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP-------------------- 203
H + Y G L QT + ++ + FSP
Sbjct: 207 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAG 266
Query: 204 -------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAA 237
+G + ++ ++RD + +G FV ++ + A A
Sbjct: 267 AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 326
Query: 238 ISGLNG 243
I+ LNG
Sbjct: 327 IASLNG 332
>gi|73977009|ref|XP_532585.2| PREDICTED: ELAV-like protein 4 isoform 1 [Canis lupus familiaris]
gi|291398932|ref|XP_002715154.1| PREDICTED: ELAV-like 4-like isoform 5 [Oryctolagus cuniculus]
gi|426215486|ref|XP_004002003.1| PREDICTED: ELAV-like protein 4 isoform 3 [Ovis aries]
Length = 366
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|344241813|gb|EGV97916.1| ELAV-like protein 4 [Cricetulus griseus]
gi|431896875|gb|ELK06139.1| ELAV-like protein 4, partial [Pteropus alecto]
Length = 350
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 45 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 104
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 105 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 158
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 159 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 208
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 115 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 170
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG-----------------ERE 174
G F++F EA AI+ LNG G I V+FA+ R
Sbjct: 171 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 229
Query: 175 HP-------------------------------VAPPDKLYVGCLSKQTSKKEIEEVFSP 203
+P ++V LS + + + ++F P
Sbjct: 230 YPGPLHHQAQRFRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGP 289
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 290 FGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 330
>gi|297664979|ref|XP_002810890.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pongo abelii]
Length = 371
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 237
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 238 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 297
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 298 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351
>gi|221316773|ref|NP_001138249.1| ELAV-like protein 4 isoform 5 [Homo sapiens]
gi|114556458|ref|XP_001135525.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 9 [Pan troglodytes]
gi|332219805|ref|XP_003259048.1| PREDICTED: ELAV-like protein 4 isoform 3 [Nomascus leucogenys]
gi|397518908|ref|XP_003829617.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pan paniscus]
gi|402854507|ref|XP_003891909.1| PREDICTED: ELAV-like protein 4 isoform 3 [Papio anubis]
gi|426329577|ref|XP_004025815.1| PREDICTED: ELAV-like protein 4 isoform 3 [Gorilla gorilla gorilla]
gi|119627250|gb|EAX06845.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_e [Homo sapiens]
gi|221041752|dbj|BAH12553.1| unnamed protein product [Homo sapiens]
Length = 369
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 51 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 111 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 164
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 165 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 214
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 121 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 176
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 177 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 235
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 236 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 295
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 296 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 349
>gi|119627248|gb|EAX06843.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Homo sapiens]
Length = 356
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 51 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 111 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 164
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 165 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 214
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 121 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 176
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG-----------------ERE 174
G F++F EA AI+ LNG G I V+FA+ R
Sbjct: 177 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 235
Query: 175 HP-------------------------------VAPPDKLYVGCLSKQTSKKEIEEVFSP 203
+P ++V LS + + + ++F P
Sbjct: 236 YPGPLHHQAQRFRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGP 295
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 296 FGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 336
>gi|395730528|ref|XP_003775743.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 366
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|149693653|ref|XP_001492549.1| PREDICTED: ELAV-like protein 4 isoform 3 [Equus caballus]
Length = 366
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|254281262|ref|NP_001156871.1| ELAV-like protein 4 isoform d [Mus musculus]
gi|73977013|ref|XP_860413.1| PREDICTED: ELAV-like protein 4 isoform 17 [Canis lupus familiaris]
gi|291398928|ref|XP_002715152.1| PREDICTED: ELAV-like 4-like isoform 3 [Oryctolagus cuniculus]
gi|354468152|ref|XP_003496531.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cricetulus griseus]
gi|426215484|ref|XP_004002002.1| PREDICTED: ELAV-like protein 4 isoform 2 [Ovis aries]
Length = 371
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 237
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 238 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 297
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 298 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351
>gi|114556468|ref|XP_001135779.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 12 [Pan troglodytes]
gi|332219801|ref|XP_003259046.1| PREDICTED: ELAV-like protein 4 isoform 1 [Nomascus leucogenys]
gi|395855041|ref|XP_003799980.1| PREDICTED: ELAV-like protein 4 isoform 3 [Otolemur garnettii]
gi|397518902|ref|XP_003829614.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pan paniscus]
gi|402854503|ref|XP_003891907.1| PREDICTED: ELAV-like protein 4 isoform 1 [Papio anubis]
gi|426329573|ref|XP_004025813.1| PREDICTED: ELAV-like protein 4 isoform 1 [Gorilla gorilla gorilla]
gi|221042444|dbj|BAH12899.1| unnamed protein product [Homo sapiens]
gi|261860582|dbj|BAI46813.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 4
[synthetic construct]
Length = 371
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 237
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 238 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 297
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 298 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351
>gi|224058156|ref|XP_002196701.1| PREDICTED: ELAV-like protein 4 [Taeniopygia guttata]
Length = 371
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKTSQALLSQLYQSPNRR 237
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 238 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 297
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 298 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 204
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 204
>gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegicus]
gi|34328053|ref|NP_034617.1| ELAV-like protein 3 [Mus musculus]
gi|3913870|sp|Q60900.1|ELAV3_MOUSE RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC
gi|1146120|gb|AAC52999.1| mHuC-L [Mus musculus]
gi|26006109|dbj|BAC41352.1| HuC [Rattus norvegicus]
gi|30354162|gb|AAH52097.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Mus musculus]
gi|148693297|gb|EDL25244.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Mus musculus]
gi|149020436|gb|EDL78241.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Rattus norvegicus]
Length = 367
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 101 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D+ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 155 RILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 100 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 155
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE------ 174
+ D+ TG +G F++F EA AI+ LNG G I V+FA+ +
Sbjct: 156 ILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 214
Query: 175 --HPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
H + Y G L QT + ++ + + YG
Sbjct: 215 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 248
>gi|297664975|ref|XP_002810888.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pongo abelii]
Length = 369
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 51 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 111 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 164
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 165 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 214
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 121 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 176
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 177 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 235
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 236 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 295
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 296 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 349
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 216
>gi|338721769|ref|XP_003364429.1| PREDICTED: ELAV-like protein 4 [Equus caballus]
Length = 371
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 237
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 238 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 297
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 298 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351
>gi|119627249|gb|EAX06844.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_d [Homo sapiens]
Length = 365
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 47 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 106
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 107 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 160
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 161 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 210
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 117 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 172
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 173 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 231
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 232 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 291
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 292 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 345
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 216
>gi|390465920|ref|XP_003733490.1| PREDICTED: ELAV-like protein 4 isoform 3 [Callithrix jacchus]
gi|403258119|ref|XP_003921626.1| PREDICTED: ELAV-like protein 4 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 45 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 104
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 105 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 158
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 159 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 208
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 115 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 170
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 171 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 208
>gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]
Length = 412
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 216
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 216
>gi|170061963|ref|XP_001866463.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880034|gb|EDS43417.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 341
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT-GQQQGYCFVKFTIFEEAGNAIRA 150
L V +P+T T+E+++ LF G+V L +DK T GQ GY FV + E+A AI
Sbjct: 29 LIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTAGQSLGYGFVNYHRPEDAEKAINT 88
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV FA + LYV LSK +++++E +F PYG I
Sbjct: 89 FNGLRL---QNKTIKVSFARPSSD--AIKGANLYVSGLSKSMTQQDLEALFQPYGQIITS 143
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G F++F R A AI LNGT T +G+ +P+ V+ A+
Sbjct: 144 RILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGT-TPKGASEPITVKFAN 193
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 58/250 (23%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y + + + + FNG + K F P+ D I A LYV+ + ++ T++D+
Sbjct: 75 NYHRPEDAEKAINTFNGLRLQNKTIKVSFARPSSDAIKG----ANLYVSGLSKSMTQQDL 130
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKV 166
LF+ +G +I + D TG +G F++F EA AI+ LNG G I V
Sbjct: 131 EALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTP-KGASEPITV 189
Query: 167 RFAD---------------------GEREHPVAPPDKL---------------------- 183
+FA+ R P P L
Sbjct: 190 KFANNPSNNINKAIPPLAAYLTPTPNLRRFPPGPIHPLGGRFSRYSPLTGDLGTSVLSAN 249
Query: 184 ---------YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREM 233
+V L+ +T + + ++F P+G ++ + +++D + + +G FV ++ +
Sbjct: 250 AINGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDE 309
Query: 234 ALAAISGLNG 243
A+ A+ LNG
Sbjct: 310 AVVAVQSLNG 319
>gi|345780791|ref|XP_859879.2| PREDICTED: ELAV-like protein 4 isoform 4 [Canis lupus familiaris]
Length = 364
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 46 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 105
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 106 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 159
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 160 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 209
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 116 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 171
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 172 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 230
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 231 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 290
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 291 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 344
>gi|344278909|ref|XP_003411234.1| PREDICTED: ELAV-like protein 4-like [Loxodonta africana]
Length = 419
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 101 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 160
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 161 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 214
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 215 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 264
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 171 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 226
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 227 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 264
>gi|354475185|ref|XP_003499810.1| PREDICTED: ELAV-like protein 3 [Cricetulus griseus]
Length = 359
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 40 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D+ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 98/253 (38%), Gaps = 68/253 (26%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 92 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 147
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 148 GRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 206
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP------------- 203
+ H + Y G L QT + ++ + FSP
Sbjct: 207 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVG 266
Query: 204 --------------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSH 230
+G + ++ ++RD + +G FV ++
Sbjct: 267 LSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 326
Query: 231 REMALAAISGLNG 243
+ A AI+ LNG
Sbjct: 327 YDEAAMAIASLNG 339
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 211
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 211
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 211
>gi|326925350|ref|XP_003208879.1| PREDICTED: ELAV-like protein 4-like [Meleagris gallopavo]
Length = 379
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 61 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 120
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 121 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 174
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 175 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 224
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 131 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 186
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 187 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKTSQALLSQLYQSPNRR 245
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 246 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 305
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 306 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 359
>gi|297664981|ref|XP_002810891.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pongo abelii]
Length = 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|149693651|ref|XP_001492503.1| PREDICTED: ELAV-like protein 4 isoform 1 [Equus caballus]
Length = 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|221316767|ref|NP_001138246.1| ELAV-like protein 4 isoform 2 [Homo sapiens]
gi|384475927|ref|NP_001245109.1| ELAV-like protein 4 [Macaca mulatta]
gi|114556464|ref|XP_001135692.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 11 [Pan troglodytes]
gi|332219803|ref|XP_003259047.1| PREDICTED: ELAV-like protein 4 isoform 2 [Nomascus leucogenys]
gi|395855037|ref|XP_003799978.1| PREDICTED: ELAV-like protein 4 isoform 1 [Otolemur garnettii]
gi|397518904|ref|XP_003829615.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pan paniscus]
gi|402854505|ref|XP_003891908.1| PREDICTED: ELAV-like protein 4 isoform 2 [Papio anubis]
gi|426329575|ref|XP_004025814.1| PREDICTED: ELAV-like protein 4 isoform 2 [Gorilla gorilla gorilla]
gi|14280327|gb|AAK57540.1| HUD1 [Homo sapiens]
gi|380810346|gb|AFE77048.1| ELAV-like protein 4 isoform 2 [Macaca mulatta]
Length = 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|125991914|ref|NP_001075075.1| ELAV-like protein 4 [Bos taurus]
gi|73976985|ref|XP_859918.1| PREDICTED: ELAV-like protein 4 isoform 5 [Canis lupus familiaris]
gi|291398926|ref|XP_002715151.1| PREDICTED: ELAV-like 4-like isoform 2 [Oryctolagus cuniculus]
gi|301772324|ref|XP_002921582.1| PREDICTED: ELAV-like protein 4-like [Ailuropoda melanoleuca]
gi|426215482|ref|XP_004002001.1| PREDICTED: ELAV-like protein 4 isoform 1 [Ovis aries]
gi|124829171|gb|AAI33284.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Bos taurus]
gi|296489084|tpg|DAA31197.1| TPA: ELAV-like 4 [Bos taurus]
Length = 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 211
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P ++E++R LF G V L ++K +G+ GY FVKF +AG AI+ L
Sbjct: 122 LIINYLPPNMSQEEVRALFSSIGEVESCKLVREKTSGESLGYAFVKFYDPLDAGKAIKTL 181
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + ++KV A E LY+ L ++ ++ E+E++FS GHI
Sbjct: 182 NGLRL---QNKTVKVSLARPSSE--AIKGANLYICGLPRKMTQPELEKLFSACGHIITAR 236
Query: 212 IVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + SRG AF+++ R A AAI LNG + G+ +P+ V+ A+
Sbjct: 237 ILYDTKTGLSRGVAFIRYDQRTEAEAAIRKLNG-YLPPGASEPITVKFAN 285
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LY+ +PR T+ ++ LF G++I + D +TG +G F+++ EA AIR
Sbjct: 206 ANLYICGLPRKMTQPELEKLFSACGHIITARILYDTKTGLSRGVAFIRYDQRTEAEAAIR 265
Query: 150 ALNGHYIFPGEQASIKVRFAD 170
LNG Y+ PG I V+FA+
Sbjct: 266 KLNG-YLPPGASEPITVKFAN 285
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDEL-KQSRGCAFVQFSHREMALAAISGL 241
++V L+ T + + ++F P+G ++ + ++RD + + +G FV S+ E AL AI L
Sbjct: 532 IFVYNLAPDTEESTLWQLFGPFGAVQTVKVIRDPITSKCKGFGFVTMSNYEEALLAIHSL 591
Query: 242 NG 243
NG
Sbjct: 592 NG 593
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 211
>gi|71051886|gb|AAH99348.1| ElrD protein, partial [Xenopus laevis]
Length = 360
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 42 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 101
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 102 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 155
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 156 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGAAEPITVKFAN 205
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 112 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 167
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 168 GVGFIRFDKRIEAEEAIKGLNGQKP-SGAAEPITVKFANNPSQKTSQALLSQLYQSPNRR 226
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 227 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 286
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 287 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 211
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 211
>gi|395855039|ref|XP_003799979.1| PREDICTED: ELAV-like protein 4 isoform 2 [Otolemur garnettii]
Length = 383
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 124
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 125 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 178
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 179 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 228
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 135 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 190
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 191 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 249
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 250 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 309
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 310 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 363
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 11/172 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+ ++ LF G + + KD +TG GY FV F +A NAI++L
Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSL 163
Query: 152 NGHYIFPGEQASIKVRFA--DGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
NG + +KV +A GE LYV L + + E+E++F YG+I
Sbjct: 164 NGVTV---RNKRLKVSYARPGGES----IKDTNLYVTNLPRTITDDELEKIFGKYGNIVQ 216
Query: 210 IFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L + RG AFV+F+ RE A AIS LN G+ QPL VR+A+
Sbjct: 217 KNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIP-EGASQPLTVRLAE 267
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P + I D+ LYV +PRT T++++ +F ++GN+++ + +DK TG+ +
Sbjct: 174 KVSYARPGGESIKDT----NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPR 229
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV+F EEA AI ALN + I G + VR A+
Sbjct: 230 GVAFVRFNKREEAQEAISALN-NVIPEGASQPLTVRLAE 267
>gi|297279975|ref|XP_002801847.1| PREDICTED: CUGBP Elav-like family member 3-like, partial [Macaca
mulatta]
Length = 438
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 116 VIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREH 175
+ E+ + KDK TG +G F+ + + A A AL+ PG I+V+ AD E
Sbjct: 1 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR- 59
Query: 176 PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMAL 235
KL+VG L KQ + +++ ++F P+G I++ ++R S+GCAFV+F A
Sbjct: 60 --GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQ 117
Query: 236 AAISGLNGTFTMRGSDQPLVVRIADPKKPR 265
AAI+ L+ + T+ G+ LVV+ AD +K R
Sbjct: 118 AAINTLHSSRTLPGASSSLVVKFADTEKER 147
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 74 GFNHPA---PDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + T+ED+R +FE G + E + + G
Sbjct: 44 GMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTS 102
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE 174
+G FVKF EA AI L+ PG +S+ V+FAD E+E
Sbjct: 103 KGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKE 146
>gi|347446713|ref|NP_571528.2| ELAV-like protein 4 isoform 3 [Danio rerio]
Length = 403
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 78 PAPDHINDSGIPAK--LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
P+P S +K L V +P+ T+E+ R LF G + L +DK TGQ GY F
Sbjct: 66 PSPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 125
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSK 194
V + ++A AI LNG + + +IKV +A R + D LYV L K ++
Sbjct: 126 VNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQ 179
Query: 195 KEIEEVFSPYGHIEDIFIVRDELK----QSRGCAFVQFSHREMALAAISGLNGTFTMRGS 250
KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG G+
Sbjct: 180 KELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGA 238
Query: 251 DQPLVVRIAD 260
+P+ V+ A+
Sbjct: 239 AEPITVKFAN 248
>gi|608543|gb|AAA96945.1| ribonucleoprotein [Xenopus laevis]
Length = 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGAAEPITVKFAN 211
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGAAEPITVKFANNPSQKTSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 346
>gi|221316769|ref|NP_001138247.1| ELAV-like protein 4 isoform 3 [Homo sapiens]
gi|14280325|gb|AAK57539.1| HUD4 [Homo sapiens]
Length = 383
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 124
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 125 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 178
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 179 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 228
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 135 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 190
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 191 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 228
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+ ++ LF G + + KD +TG GY FV F +A NAI+ +
Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTV 163
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + +KV +A E LYV L + + E+E++F YG+I
Sbjct: 164 NGITV---RNKRLKVSYARPGGES--IKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKN 218
Query: 212 IVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L + RG AFV+F+ RE A AIS LN G+ QPL VR+A+
Sbjct: 219 ILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIP-EGASQPLTVRLAE 267
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P + I D+ LYV +PRT T++++ +F ++GN+++ + +DK TG+ +
Sbjct: 174 KVSYARPGGESIKDT----NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPR 229
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV+F EEA AI ALN + I G + VR A+
Sbjct: 230 GVAFVRFNKREEAQEAISALN-NVIPEGASQPLTVRLAE 267
>gi|194207476|ref|XP_001492529.2| PREDICTED: ELAV-like protein 4 isoform 2 [Equus caballus]
Length = 383
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 124
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 125 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 178
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 179 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 228
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 135 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 190
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 191 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 228
>gi|348554577|ref|XP_003463102.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cavia porcellus]
gi|354468154|ref|XP_003496532.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cricetulus griseus]
Length = 383
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 65 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 124
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 125 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 178
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 179 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 228
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 135 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 190
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 191 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 228
>gi|18858615|ref|NP_571524.1| ELAV-like protein 3 [Danio rerio]
gi|1683635|gb|AAB36515.1| zHuC [Danio rerio]
Length = 345
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ + LF G + L +DK TGQ GY FV + +A AI L
Sbjct: 40 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+K++E++FS YG I
Sbjct: 100 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITS 153
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ +++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 154 RILVNQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 211
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 54/232 (23%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++D+ LF ++G +I
Sbjct: 99 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKDMEQLFSQYGRIITSR 154
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD---------- 170
+ ++ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 155 ILVNQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 213
Query: 171 -------------GEREH-------------------------PVAPPDKLYVGCLSKQT 192
G H P ++V LS +
Sbjct: 214 LTQLYQTAARRYTGPLHHQTQRFRFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPEA 273
Query: 193 SKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+ + ++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 274 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNG 325
>gi|327271181|ref|XP_003220366.1| PREDICTED: ELAV-like protein 4-like [Anolis carolinensis]
Length = 410
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 92 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 151
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 152 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 205
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 206 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 255
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 151 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 206
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 207 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 255
>gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 47 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 106
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 107 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 160
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 161 RILVDQVTGGSRGVGFIRFDKRVEAEEAIKGLNGQ-KPSGAAEPITVKFAN 210
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 117 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSR 172
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 173 GVGFIRFDKRVEAEEAIKGLNGQKP-SGAAEPITVKFAN 210
>gi|347446708|ref|NP_001231529.1| ELAV-like protein 4 isoform 1 [Danio rerio]
Length = 411
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 78 PAPDHINDSGIPAK--LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
P+P S +K L V +P+ T+E+ R LF G + L +DK TGQ GY F
Sbjct: 74 PSPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 133
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSK 194
V + ++A AI LNG + + +IKV +A R + D LYV L K ++
Sbjct: 134 VNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQ 187
Query: 195 KEIEEVFSPYGHIEDIFIVRDELK----QSRGCAFVQFSHREMALAAISGLNGTFTMRGS 250
KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG G+
Sbjct: 188 KELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGA 246
Query: 251 DQPLVVRIAD 260
+P+ V+ A+
Sbjct: 247 AEPITVKFAN 256
>gi|332219807|ref|XP_003259049.1| PREDICTED: ELAV-like protein 4 isoform 4 [Nomascus leucogenys]
gi|332808951|ref|XP_001135610.2| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 10 [Pan troglodytes]
gi|397518906|ref|XP_003829616.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pan paniscus]
gi|402854509|ref|XP_003891910.1| PREDICTED: ELAV-like protein 4 isoform 4 [Papio anubis]
gi|426329579|ref|XP_004025816.1| PREDICTED: ELAV-like protein 4 isoform 4 [Gorilla gorilla gorilla]
gi|119627246|gb|EAX06841.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_a [Homo sapiens]
Length = 402
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 84 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 143
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 144 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 197
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 198 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 247
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 154 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 209
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 210 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 247
>gi|347446711|ref|NP_001231530.1| ELAV-like protein 4 isoform 2 [Danio rerio]
Length = 398
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 78 PAPDHINDSGIPAK--LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
P+P S +K L V +P+ T+E+ R LF G + L +DK TGQ GY F
Sbjct: 61 PSPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 120
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSK 194
V + ++A AI LNG + + +IKV +A R + D LYV L K ++
Sbjct: 121 VNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQ 174
Query: 195 KEIEEVFSPYGHIEDIFIVRDELK----QSRGCAFVQFSHREMALAAISGLNGTFTMRGS 250
KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG G+
Sbjct: 175 KELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGA 233
Query: 251 DQPLVVRIAD 260
+P+ V+ A+
Sbjct: 234 AEPITVKFAN 243
>gi|390465922|ref|XP_003733491.1| PREDICTED: ELAV-like protein 4 isoform 4 [Callithrix jacchus]
gi|403258121|ref|XP_003921627.1| PREDICTED: ELAV-like protein 4 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 402
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 84 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 143
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 144 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 197
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 198 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 247
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 154 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 209
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 210 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 247
>gi|395730526|ref|XP_003775742.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 402
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 84 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 143
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 144 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 197
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 198 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 247
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 154 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 209
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 210 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 247
>gi|410967448|ref|XP_003990231.1| PREDICTED: ELAV-like protein 4 [Felis catus]
Length = 494
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 76 NHPAPDHINDSGIPAK--LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
N P+P + +K L V +P+ T+E+ R LF G + L +DK TGQ GY
Sbjct: 47 NCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGY 106
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQT 192
FV + ++A AI LNG + + +IKV +A R + D LYV L K
Sbjct: 107 GFVNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTM 160
Query: 193 SKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG G+
Sbjct: 161 TQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGAT 219
Query: 252 QPLVVRIAD 260
+P+ V+ A+
Sbjct: 220 EPITVKFAN 228
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 124 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 179
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 180 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 228
>gi|326934283|ref|XP_003213221.1| PREDICTED: CUGBP Elav-like family member 5-like [Meleagris
gallopavo]
Length = 379
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSK 190
QG F+ + + A A AL+ PG I+V+ AD E KL+VG L+K
Sbjct: 18 QGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR---GGDRKLFVGMLNK 74
Query: 191 QTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGS 250
Q S+ ++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+
Sbjct: 75 QQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGA 134
Query: 251 DQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRP------------PPNLGNSA 298
LVV+ AD K RT F P+ P P L S
Sbjct: 135 SSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSH 194
Query: 299 GGQILPNVSYRPQHI 313
G + P V++ P HI
Sbjct: 195 GSYLSPGVAFSPCHI 209
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +E+D+ LFE G + E + + G +G FVKF+ EA AI A
Sbjct: 66 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGP-DGNSKGCAFVKFSSHTEAQAAIHA 124
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
L+G PG +S+ V+FAD ++E + ++ VG L T + FSPY
Sbjct: 125 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGIFTPSLTLP--FSPY 175
>gi|291398930|ref|XP_002715153.1| PREDICTED: ELAV-like 4-like isoform 4 [Oryctolagus cuniculus]
Length = 402
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 84 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 143
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 144 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 197
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 198 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 247
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 154 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 209
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 210 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 247
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 20/183 (10%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+++IR LF G V L +DK TGQ GY FV + E+A AI L
Sbjct: 30 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRSEDAEKAINTL 89
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +FSPYG I
Sbjct: 90 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSR 144
Query: 212 IVRDELK--------------QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
I+ D + S+G F++F R A AI LNGT +GS +P+ V+
Sbjct: 145 ILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPITVK 203
Query: 258 IAD 260
A+
Sbjct: 204 FAN 206
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ + A+ AI L
Sbjct: 291 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 350
Query: 242 NG 243
NG
Sbjct: 351 NG 352
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P++ TE+++ +F G V + KD +TG G+ FV +T E+A AI L
Sbjct: 84 LIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAINTL 143
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++K++EE+FS +G I
Sbjct: 144 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKN 198
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I++D+L RG AFV++ RE A AI+ L+GT GS+ PL V+IA+
Sbjct: 199 ILKDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSE-PLSVKIAE 247
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE+ + +F + G +++ + KDK TG +
Sbjct: 154 KVSFARPSGEEIKET----NLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPR 209
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV++ EEA +AI L+G
Sbjct: 210 GVAFVRYDKREEAQDAINQLHG 231
>gi|608549|gb|AAA96940.1| ribonucleoprotein [Danio rerio]
gi|68085524|gb|AAH65965.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Danio rerio]
Length = 367
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 78 PAPDHINDSGIPAK--LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
P+P S +K L V +P+ T+E+ R LF G + L +DK TGQ GY F
Sbjct: 30 PSPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 89
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSK 194
V + ++A AI LNG + + +IKV +A R + D LYV L K ++
Sbjct: 90 VNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQ 143
Query: 195 KEIEEVFSPYGHIEDIFIVRDELK----QSRGCAFVQFSHREMALAAISGLNGTFTMRGS 250
KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG G+
Sbjct: 144 KELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGA 202
Query: 251 DQPLVVRIAD 260
+P+ V+ A+
Sbjct: 203 AEPITVKFAN 212
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+ ++ LF G + + KD +TG GY FV F +A NAI+ +
Sbjct: 97 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTV 156
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + +KV +A E LYV L + + E+E++F YG+I
Sbjct: 157 NGITV---RNKRLKVSYARPGGES--IKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKN 211
Query: 212 IVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L + RG AFV+F+ RE A AIS LN G+ QPL VR+A+
Sbjct: 212 ILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIP-EGASQPLTVRLAE 260
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P + I D+ LYV +PRT T++++ +F ++GN+++ + +DK TG+ +
Sbjct: 167 KVSYARPGGESIKDT----NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPR 222
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV+F EEA AI ALN + I G + VR A+
Sbjct: 223 GVAFVRFNKREEAQEAISALN-NVIPEGASQPLTVRLAE 260
>gi|294941928|ref|XP_002783310.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239895725|gb|EER15106.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 429
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 34/216 (15%)
Query: 79 APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKF 138
A D + + + KL+V +P E D+R +FEE+G V +V + +D+ T Q +G FV+F
Sbjct: 5 AADRMESTSV--KLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAFVRF 62
Query: 139 TIFEEAGNAIRALNGHYI--------------------FPGEQASIKVRFADGEREH--- 175
AI+ALNG+ + F + V A GE E
Sbjct: 63 RDIPSGMAAIKALNGYRLCHNTSTSCIDNDVESVNDMSFAQSHIPLSVSLAQGEAERLGM 122
Query: 176 -----PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSH 230
KL+V L T ++E+ +F P+G I ++ + AFV+F+
Sbjct: 123 HGEVVATGGDTKLFVSGLGPGTQEEELRTIFEPFGRINEVHVPGPHAL----YAFVRFAE 178
Query: 231 REMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
+E AL AI +NG T+ GS +PL V++A+ + +
Sbjct: 179 KEDALKAIREVNGRVTVEGSQRPLEVKVAESRAAKA 214
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A ++V VP TE+D+R F GN++ + DK TG +GY F+ + + AG A+
Sbjct: 331 ANVFVFWVPDAWTEDDLRDHFSSFGNIVSAKVVVDKHTGLSRGYGFISYDNAQSAGRAVA 390
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPV 177
+NG G + IKV+ GE + V
Sbjct: 391 EMNGFVAANGRR--IKVQIKKGEEDAAV 416
>gi|308809696|ref|XP_003082157.1| RNA-binding protein ELAV/HU (RRM superfamily) (ISS) [Ostreococcus
tauri]
gi|116060625|emb|CAL57103.1| RNA-binding protein ELAV/HU (RRM superfamily) (ISS) [Ostreococcus
tauri]
Length = 679
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 58 TDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVI 117
+DF + + GR R + A D K+Y+ +P TAT E ++ +F G V
Sbjct: 359 SDFLSELGVDGRGRARRLDENAEDD-------RKVYIGRLPTTATAEGLKDMFSSAGVVQ 411
Query: 118 EVVLPKDKRTGQQ-QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGERE-- 174
EV D G +G+ F+ F ++A A +NG E ++VR + RE
Sbjct: 412 EVACIPDTVLGHSCKGFAFITFATVDDAMKAASTMNGVMF---EDRPMEVRMKNAPREQT 468
Query: 175 ----HPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFS 229
+ P LYVG +++ ++ + E+FSPYG ++ IVRD Q ++G FVQ
Sbjct: 469 QKEANEFDPNANLYVGGVTESMNEDALREIFSPYGLVQKTKIVRDHATQAAKGYGFVQMM 528
Query: 230 HREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR------GNYAFGTPSFGPN 283
A AAI+ L+G + S +P +VRIA ++ N+ F P +G N
Sbjct: 529 DPSHAQAAITALDGQY-FADSTRPFMVRIAGQNGGGGAQVSMAFPSATNFDFTAPGYG-N 586
Query: 284 FLEPV 288
+ PV
Sbjct: 587 YQTPV 591
>gi|196475703|gb|ACG76412.1| trinucleotide repeat containing 4 (predicted) [Otolemur garnettii]
Length = 564
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 6/176 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V +PR E+D++P+FE+ G + E+ + KDK TG +G F+ + + A A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L+ PG I+V+ AD E KL+VG L KQ + +++ ++F P+G I++
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESR---GEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 211 FIVRDELKQSRGCAFVQFSHREMALAAISGLNGTF-TMRGSDQPLVVRIADPKKPR 265
++R S+G ++ H + + L+ RG+ LVV+ AD +K R
Sbjct: 125 TVLRGPDGTSKGLPLLK--HMPLQPSISPSLSVCHQEERGASSSLVVKFADTEKER 178
>gi|221042398|dbj|BAH12876.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 14 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 73
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 74 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 127
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 128 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 177
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 84 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 139
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 140 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 177
>gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus]
Length = 371
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 91/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K +KE+E++FS YG I
Sbjct: 113 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMIQKELEQLFSQYGRIITS 166
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 167 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 216
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 91/234 (38%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T ++++ LF ++G +I + D+ TG +
Sbjct: 123 KVSYARPSSASIRD----ANLYVSGLPKTMIQKELEQLFSQYGRIITSRILVDQVTGVSR 178
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 179 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 237
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 238 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 297
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 298 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 351
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 56/223 (25%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ----------------TSKKEIE--------------------------EVF 201
Y G L++Q TS I ++F
Sbjct: 226 YPGPLAQQAQRFRSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMF 285
Query: 202 SPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 GPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 328
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P++ TE+++ +F G V + KD +TG G+ FV +T E+A AI L
Sbjct: 101 LIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAINTL 160
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++K++EE+FS +G I
Sbjct: 161 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKN 215
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I++D+L RG AFV++ RE A AI+ L+GT GS+ PL V+IA+
Sbjct: 216 ILKDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSE-PLSVKIAE 264
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE+ + +F + G +++ + KDK TG +
Sbjct: 171 KVSFARPSGEEIKETN----LYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPR 226
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV++ EEA +AI L+G
Sbjct: 227 GVAFVRYDKREEAQDAINQLHG 248
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ---------------TSKKEIE--------------------------EVFS 202
Y G L++Q TS I ++F
Sbjct: 226 YPGPLAQQAQRFSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFG 285
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ---------------TSKKEIE--------------------------EVFS 202
Y G L++Q TS I ++F
Sbjct: 226 YPGPLAQQAQRFSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFG 285
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P++ TE+D+ LF G V + KD +TG G+ FV + E+A AI L
Sbjct: 115 LIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAINTL 174
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++ +I+++FS YG+I
Sbjct: 175 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITESQIDDIFSKYGNIVQKN 229
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I++D++ RG AFV+F RE A AI+ L+GT G +PL V+IA+
Sbjct: 230 ILKDKITGLPRGVAFVRFDKREEAQEAIARLHGTIP-EGGSEPLSVKIAE 278
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE I +F ++GN+++ + KDK TG +
Sbjct: 185 KVSFARPSGEEIKET----NLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKITGLPR 240
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV+F EEA AI L+G
Sbjct: 241 GVAFVRFDKREEAQEAIARLHG 262
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ---------------TSKKEIE--------------------------EVFS 202
Y G L++Q TS I ++F
Sbjct: 226 YPGPLAQQAQRFSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFG 285
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ---------------TSKKEIE--------------------------EVFS 202
Y G L++Q TS I ++F
Sbjct: 226 YPGPLAQQAQRFRRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFG 285
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ---------------TSKKEIE--------------------------EVFS 202
Y G L++Q TS I ++F
Sbjct: 226 YPGPLAQQAQRFSRFSPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFG 285
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ--------------TSKKEIE--------------------------EVFSP 203
Y G L++Q TS I ++F P
Sbjct: 226 YPGPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGP 285
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 34/228 (14%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+YV + + T++D++ F E+G + V+ KD G+ +G+ FV F ++A A+ +L
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESL 275
Query: 152 NGH-------YIFPGEQAS-----IKVRFADGEREHPVAPPDK-----LYVGCLSKQTSK 194
NGH Y+ ++ S ++VR+ +E DK LYV L S
Sbjct: 276 NGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKE----AADKFQSSNLYVKNLDPSISD 331
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++++E+FSP+G + ++RD S+G FV F+ E A A+S L+G +PL
Sbjct: 332 EKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMI---ESKPL 388
Query: 255 VVRIADPKKPRTGELRGNYA-----FGTPSFGPNFLEPVRPP--PNLG 295
V IA K+ R L+ ++ PS GP PV PP P +G
Sbjct: 389 YVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRM--PVYPPGGPGIG 434
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
LYV + T+ + F + G V+ V + +D T + GY +V FT ++A AI+ L
Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
N YI P I+V ++ + + +++ L + K + + FS +G+I
Sbjct: 98 N--YI-PLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCK 154
Query: 212 IVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ D QS+G FVQ+++ E A AI LNG
Sbjct: 155 VAVDSSGQSKGYGFVQYANEESAQKAIEKLNGML 188
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 19/193 (9%)
Query: 80 PDHINDSGIPAK----------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQ 129
P+ IN+ P + L V +P+ T+E+++ LF G + L +DK TGQ
Sbjct: 18 PNTINNCSSPVESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 77
Query: 130 QQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCL 188
GY FV + ++A AI LNG + + +IKV +A R + D LYV L
Sbjct: 78 SLGYGFVNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGL 131
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTM 247
K ++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG
Sbjct: 132 PKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KP 190
Query: 248 RGSDQPLVVRIAD 260
G+ +P+ V+ A+
Sbjct: 191 PGATEPITVKFAN 203
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 110 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 165
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG---EREHPVA-----PPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + H + P++
Sbjct: 166 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKVNHTILSQLYQSPNRR 224
Query: 184 YVGCLSKQ---------------TSKKEIE--------------------------EVFS 202
Y G L++Q TS I ++F
Sbjct: 225 YPGPLAQQAQRFSRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFG 284
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 285 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ--------------TSKKEIE--------------------------EVFSP 203
Y G L++Q TS I ++F P
Sbjct: 226 YPGPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGP 285
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L++Q + ++ + FSP
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLA 285
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV------------------------------------------- 200
Y G L++Q + ++ +
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 285
Query: 201 ----------FSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
F P+G + ++ ++RD + +G FV ++ + A AI LNG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSLNG 339
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 34/228 (14%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+YV + + T++D++ F E+G + V+ KD G+ +G+ FV F ++A A+ +L
Sbjct: 201 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESL 259
Query: 152 NGH-------YIFPGEQAS-----IKVRFADGEREHPVAPPDK-----LYVGCLSKQTSK 194
NGH Y+ ++ S ++VR+ +E DK LYV L S
Sbjct: 260 NGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKE----AADKFQSSNLYVKNLDPSISD 315
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++++E+FSP+G + ++RD S+G FV F+ E A A+S L+G +PL
Sbjct: 316 EKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMI---ESKPL 372
Query: 255 VVRIADPKKPRTGELRGNYA-----FGTPSFGPNFLEPVRPP--PNLG 295
V IA K+ R L+ ++ PS GP PV PP P +G
Sbjct: 373 YVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRM--PVYPPGGPGIG 418
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
LYV + T+ + F + G V+ V + +D T + GY +V FT ++A AI+ L
Sbjct: 22 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 81
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
N YI P I+V ++ + + +++ L + K + + FS +G+I
Sbjct: 82 N--YI-PLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCK 138
Query: 212 IVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ D QS+G FVQ+++ E A AI LNG
Sbjct: 139 VAVDSSGQSKGYGFVQYANEESAQKAIEKLNGML 172
>gi|380027075|ref|XP_003697261.1| PREDICTED: ELAV-like protein 2-like [Apis florea]
Length = 362
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 20/183 (10%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+++IR LF G V L +DK TGQ GY FV + E+A AI L
Sbjct: 30 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +FSPYG I
Sbjct: 90 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSR 144
Query: 212 IVRDELK--------------QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
I+ D + S+G F++F R A AI LNGT +GS +P+ V+
Sbjct: 145 ILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPITVK 203
Query: 258 IAD 260
A+
Sbjct: 204 FAN 206
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ + A+ AI L
Sbjct: 281 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 340
Query: 242 NG 243
NG
Sbjct: 341 NG 342
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ--------------TSKKEIE--------------------------EVFSP 203
Y G L++Q TS I ++F P
Sbjct: 226 YPGPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGP 285
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI LNG
Sbjct: 286 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSLNG 326
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
++V + A E + +F G V V + +D T + +G+ FV T ++EA AIR+L
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSL 324
Query: 152 NGHYI 156
NG+ +
Sbjct: 325 NGYRL 329
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L++Q + ++ + FSP
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLA 285
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV------------------------------------------- 200
Y G L++Q + ++ +
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 285
Query: 201 ----------FSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV------------------------------------------- 200
Y G L++Q + ++ +
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 285
Query: 201 ----------FSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
>gi|391344304|ref|XP_003746441.1| PREDICTED: ELAV-like protein 4-like [Metaseiulus occidentalis]
Length = 394
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T T+E+IR LF G V L +DK TGQ GY FV + E A AI L
Sbjct: 69 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVCAEAAEKAINTL 128
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E++F+PYG I
Sbjct: 129 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKSMTQQDLEQLFAPYGGIITSR 183
Query: 212 IVRDELKQ--SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G FV+F R A AI L+ T G+ + + V+ A+
Sbjct: 184 ILCDNITAGLSKGVGFVRFDQRVEAERAIKHLHNTIP-EGATEAITVKFAN 233
>gi|301508553|gb|ADK78238.1| ELAV2 [Schmidtea mediterranea]
Length = 411
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P T+E++R LF G V L +DK TG+ GY FVK+ + +A AIR L
Sbjct: 55 LIVNYLPPNMTQEEVRALFSSIGVVESCKLVRDKTTGESLGYSFVKYLNYPDAEKAIRTL 114
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LY+ L K+ ++ E+E +FS G I
Sbjct: 115 NGLRL---QNKTIKVSLARPSSE--AIKGANLYICGLPKKMTQMELENLFSQCGKIITAR 169
Query: 212 IVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + SRG AF++F R A AI LN ++ S +P++V+ A+
Sbjct: 170 ILYDNKTGLSRGVAFIRFDQRSEAQLAIKKLN-SYQPENSTEPIIVKFAN 218
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + ++F P+G ++ + I+RD + +G FV S+ E AL AI L
Sbjct: 305 IFVYNLAPETDDATLWQLFGPFGAVQTVKIIRDTATNKCKGFGFVTMSNYEEALLAIQSL 364
Query: 242 NGTFTM 247
NG FT+
Sbjct: 365 NG-FTL 369
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ--------------TSKKEIE--------------------------EVFSP 203
Y G L++Q TS I ++F P
Sbjct: 226 YPGPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGP 285
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 326
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L++Q + ++ + FSP
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLA 285
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEVFS----------------------------------------- 202
Y G L++Q + ++ + +
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 285
Query: 203 ------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L++Q + ++ + FSP
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLA 285
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 51 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 111 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 164
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 165 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 214
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 121 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 176
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 177 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 235
Query: 184 YVGCLSKQ--------------TSKKEIE--------------------------EVFSP 203
Y G L++Q TS I ++F P
Sbjct: 236 YPGPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGP 295
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 296 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 336
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L++Q + ++ + FSP
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHAGTGWCIFVYNLA 285
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 130 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 183
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 184 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 233
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 140 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 195
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 196 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 254
Query: 184 YVGCLSKQ---------------TSKKEIE--------------------------EVFS 202
Y G L++Q TS I ++F
Sbjct: 255 YPGPLAQQAQRFSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFG 314
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 315 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 356
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 55 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 114
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 115 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 168
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 169 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 218
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 125 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 180
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 181 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 239
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L++Q + ++ + FSP
Sbjct: 240 YPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLA 299
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 300 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 354
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV------------------------------------------- 200
Y G L++Q + ++ +
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 285
Query: 201 ----------FSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 19/193 (9%)
Query: 80 PDHINDSGIPAK----------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQ 129
P+ IN+ P + L V +P+ T+E+++ LF G + L +DK TGQ
Sbjct: 47 PNTINNCSSPVESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 106
Query: 130 QQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCL 188
GY FV + ++A AI LNG + + +IKV +A R + D LYV L
Sbjct: 107 SLGYGFVNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGL 160
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTM 247
K ++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG
Sbjct: 161 PKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KP 219
Query: 248 RGSDQPLVVRIAD 260
G+ +P+ V+ A+
Sbjct: 220 PGATEPITVKFAN 232
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 55/233 (23%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 128 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 183
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG---EREHPV 177
+ D+ TG +G F++F EA AI+ LNG PG I V+FA+ + H +
Sbjct: 184 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKVNHTI 242
Query: 178 A-----PPDKLYVGCLSKQ---------------TSKKEIE------------------- 198
P++ Y G L++Q TS I
Sbjct: 243 LSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPD 302
Query: 199 -------EVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 303 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 355
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 55 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 114
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 115 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 168
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 169 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 218
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 125 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 180
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 181 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 239
Query: 184 YVGCLSKQTSKKEIEEVFS----------------------------------------- 202
Y G L++Q + ++ + +
Sbjct: 240 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 299
Query: 203 ------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 300 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 353
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 55 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 114
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 115 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 168
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 169 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 218
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 125 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 180
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 181 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 239
Query: 184 YVGCLSKQTSKKEIEEVFS----------------------------------------- 202
Y G L++Q + ++ + +
Sbjct: 240 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 299
Query: 203 ------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 300 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 353
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 55 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 114
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 115 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 168
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 169 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 218
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 125 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 180
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 181 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 239
Query: 184 YVGCLSKQ--------------TSKKEIE--------------------------EVFSP 203
Y G L++Q TS I ++F P
Sbjct: 240 YPGPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGP 299
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 300 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 340
>gi|395530250|ref|XP_003767210.1| PREDICTED: ELAV-like protein 4 [Sarcophilus harrisii]
Length = 707
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 389 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 448
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 449 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 502
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 503 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 552
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 459 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 514
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EA AI+ LNG G I V+FA+
Sbjct: 515 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFAN 552
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 79 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 138
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 139 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 192
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 193 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 242
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 97/245 (39%), Gaps = 67/245 (27%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 138 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 193
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP---- 176
+ D+ TG +G F++F EA AI+ LNG PG I V+FA+ +
Sbjct: 194 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAI 252
Query: 177 ----VAPPDKLYVGCLSKQTSKKEIEEVFS------------------------------ 202
P++ Y G L++Q + ++ + +
Sbjct: 253 LSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHAGT 312
Query: 203 -----------------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAI 238
P+G + ++ ++RD + +G FV ++ + A AI
Sbjct: 313 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 372
Query: 239 SGLNG 243
+ LNG
Sbjct: 373 ASLNG 377
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 19/193 (9%)
Query: 80 PDHINDSGIPAK----------LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQ 129
P+ IN+ P + L V +P+ T+E+++ LF G + L +DK TGQ
Sbjct: 47 PNTINNCSSPVESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 106
Query: 130 QQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCL 188
GY FV + ++A AI LNG + + +IKV +A R + D LYV L
Sbjct: 107 SLGYGFVNYIDPKDAEKAINTLNGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGL 160
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTM 247
K ++KE+E++FS YG I I+ D++ SRG F++F R A AI GLNG
Sbjct: 161 PKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KP 219
Query: 248 RGSDQPLVVRIAD 260
G+ +P+ V+ A+
Sbjct: 220 PGATEPITVKFAN 232
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 54/232 (23%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 128 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 183
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG---EREHPV 177
+ D+ TG +G F++F EA AI+ LNG PG I V+FA+ + H +
Sbjct: 184 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKVNHTI 242
Query: 178 A-----PPDKLYVGCLSKQ--------------TSKKEIE-------------------- 198
P++ Y G L++Q TS I
Sbjct: 243 LSQLYQSPNRRYPGPLAQQAQRFRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDA 302
Query: 199 ------EVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 303 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 354
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 130 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 183
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 184 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 233
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 140 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 195
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 196 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 254
Query: 184 YVGCLSKQTSKKEIEEVFS----------------------------------------- 202
Y G L++Q + ++ + +
Sbjct: 255 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 314
Query: 203 ------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 315 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 368
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 130 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 183
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 184 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 233
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 140 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 195
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 196 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 254
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L++Q + ++ + FSP
Sbjct: 255 YPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLA 314
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 315 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 369
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 49 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 108
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 109 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 162
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 163 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 212
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 119 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 174
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 175 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 233
Query: 184 YVGCLSKQTSKKEIEEVFS----------------------------------------- 202
Y G L++Q + ++ + +
Sbjct: 234 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 293
Query: 203 ------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 294 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 347
>gi|328776307|ref|XP_393833.4| PREDICTED: CUGBP Elav-like family member 4-like [Apis mellifera]
Length = 525
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 130 QQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLS 189
Q G F+ + + A +A AL+ PG I+V+ AD E KL+VG LS
Sbjct: 109 QPGCAFLTYYSRDSAISAQNALHEKRTLPGMNRPIQVKPADSENRGD----RKLFVGMLS 164
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
KQ ++ ++ ++F+ +G IE+ I+R SRGCAFV+ S + ALAAI+ L+G+ TM G
Sbjct: 165 KQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQTMPG 224
Query: 250 SDQPLVVRIADPKKPR 265
+ LVV+ AD +K R
Sbjct: 225 ASSSLVVKFADTEKER 240
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TE+D+R LF G + E + + G +G FVK + +EA AI
Sbjct: 157 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGP-DGSSRGCAFVKLSSHQEALAAINT 215
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
L+G PG +S+ V+FAD E+E
Sbjct: 216 LHGSQTMPGASSSLVVKFADTEKE 239
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 30/224 (13%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+YV + + T++D++ F E+G + V+ KD G+ +G+ FV F ++A A+ +L
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-DGKSKGFGFVNFENADDAARAVESL 275
Query: 152 NGH-------YIFPGEQAS-----IKVRFADGEREHPVAPPDK-----LYVGCLSKQTSK 194
NGH Y+ ++ S ++VR+ +E DK LYV L S
Sbjct: 276 NGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKE----AADKFQSSNLYVKNLDPSISD 331
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++++E+FSP+G + ++RD S+G FV FS E A A+S L+G +PL
Sbjct: 332 EKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMSQLSGKMI---ESKPL 388
Query: 255 VVRIADPKKPRTGELRGNYAFGT-PSFGPNFLEPVRPP--PNLG 295
V IA K+ R + PS GP PV PP P +G
Sbjct: 389 YVAIAQRKEDRRAQFSQVRPVAMQPSVGPRM--PVYPPGGPGIG 430
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
LYV + T+ + F + G V+ V + +D T + GY +V FT ++A AI+ L
Sbjct: 38 LYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
N YI P I+V ++ + + +++ L + K + + FS +G+I
Sbjct: 98 N--YI-PLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSCK 154
Query: 212 IVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ D QS+G FVQ+++ E A AI LNG
Sbjct: 155 VAVDSSGQSKGYGFVQYANEESAQKAIEKLNGML 188
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 130 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 183
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 184 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 233
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 129 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 184
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP---- 176
+ D+ TG +G F++F EA AI+ LNG PG I V+FA+ +
Sbjct: 185 ILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAI 243
Query: 177 ----VAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
P++ Y G L++Q + ++ + + YG
Sbjct: 244 LSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYG 277
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 128
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 129 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 182
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 183 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 232
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 68/235 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 139 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 194
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 195 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 253
Query: 184 YVGCLSKQTSKKEIEEV----------FSP------------------------------ 203
Y G L++Q + ++ + FSP
Sbjct: 254 YPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLA 313
Query: 204 --------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 314 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 368
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 128
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 129 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 182
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 183 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 232
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 139 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 194
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 195 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 253
Query: 184 YVGCLSKQTSKKEIEEVFS----------------------------------------- 202
Y G L++Q + ++ + +
Sbjct: 254 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 313
Query: 203 ------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 314 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 367
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 39 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 98
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 99 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 152
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 153 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 202
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 109 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 164
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG---EREHPVA-----PPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + H + P++
Sbjct: 165 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKVNHTILSQLYQSPNRR 223
Query: 184 YVGCLSKQTSKKEIEEVFS-PYGHIEDIF 211
Y G L++Q + ++ + + YG I+ F
Sbjct: 224 YPGPLAQQAQRFRLDNLLNMAYGGIKSRF 252
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 109 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 168
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 169 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 222
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 223 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 272
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 179 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 234
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 235 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 293
Query: 184 YVGCLSKQTSKKEIEEVFS----------------------------------------- 202
Y G L++Q + ++ + +
Sbjct: 294 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 353
Query: 203 ------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 354 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 407
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT-------GQQQGYCFVKFTIFEEA 144
L V +P+T TEE+IR LF G V V L +DK GQ GY FV F ++A
Sbjct: 72 LIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNFHRSQDA 131
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
A+ LNG + + +KV FA E LY+ L K +++E+E +F PY
Sbjct: 132 EQAVNVLNGLRL---QNKVLKVSFARPSSEGIKGA--NLYISGLPKTITQEELEIIFRPY 186
Query: 205 GH-IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
G I +V+D + +G F++F R+ A AI+ LNGT T +G P+ V+ ++
Sbjct: 187 GEIITSRVLVQDGNDKPKGVGFIRFDQRKEAERAIAALNGT-TPKGLTDPITVKFSN 242
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 63/256 (24%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
++ Q + + + NG + K F P+ + I A LY++ +P+T T+E++
Sbjct: 124 NFHRSQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKG----ANLYISGLPKTITQEEL 179
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNG------------- 153
+F +G +I + + +G F++F +EA AI ALNG
Sbjct: 180 EIIFRPYGEIITSRVLVQDGNDKPKGVGFIRFDQRKEAERAIAALNGTTPKGLTDPITVK 239
Query: 154 HYIFPGEQASIKV-----------------------------RFA--DGE---REHPVAP 179
PG+ ++ K+ RF+ GE P AP
Sbjct: 240 FSNTPGQNSTAKIVQPALPTFLNPQLTRRLGAIHHPINKGLARFSPMGGEVLDMMLPTAP 299
Query: 180 PDKL-----------YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQ 227
+ L ++ L+ +T + + ++F P+G ++++ I++D Q +G FV
Sbjct: 300 TNGLGAVAPSGGWSIFIYNLAPETEENTLWQLFGPFGAVQNVKIIKDSATNQCKGYGFVT 359
Query: 228 FSHREMALAAISGLNG 243
++ E A+ AI LNG
Sbjct: 360 MTNYEEAMLAIRSLNG 375
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 102 TEED-IRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
TEE+ + LF G V V + KD T Q +GY FV T +EEA AIR+LNG+ +
Sbjct: 323 TEENTLWQLFGPFGAVQNVKIIKDSATNQCKGYGFVTMTNYEEAMLAIRSLNGYTL 378
>gi|350403945|ref|XP_003486959.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
4-like [Bombus impatiens]
Length = 522
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 130 QQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLS 189
Q G F+ + + A +A AL+ PG I+V+ AD E KL+VG LS
Sbjct: 109 QPGCAFLTYYSRDSAISAQNALHEKRTLPGMNRPIQVKPADSENRGD----RKLFVGMLS 164
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRG 249
KQ ++ ++ ++F+ +G IE+ I+R SRGCAFV+ S + ALAAI+ L+G+ TM G
Sbjct: 165 KQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQTMPG 224
Query: 250 SDQPLVVRIADPKKPR 265
+ LVV+ AD +K R
Sbjct: 225 ASSSLVVKFADTEKER 240
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TE+D+R LF G + E + + G +G FVK + +EA AI
Sbjct: 157 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGP-DGSSRGCAFVKLSSHQEALAAINT 215
Query: 151 LNGHYIFPGEQASIKVRFADGEREH 175
L+G PG +S+ V+FAD E+E
Sbjct: 216 LHGSQTMPGASSSLVVKFADTEKER 240
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P++ TE+++ +F G V + KD +TG G+ FV +T E+A AI L
Sbjct: 40 LIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++K++EE+FS +G I
Sbjct: 100 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKN 154
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I++D+L RG AFV++ RE A AI+ L+GT GS +PL V+IA+
Sbjct: 155 ILKDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGS-EPLSVKIAE 203
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE+ + +F + G +++ + KDK TG +
Sbjct: 110 KVSFARPSGEEIKETN----LYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPR 165
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV++ EEA +AI L+G
Sbjct: 166 GVAFVRYDKREEAQDAINQLHG 187
>gi|14585790|gb|AAK67714.1| HUC [Homo sapiens]
Length = 360
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TG+ GY FV + +A AI L
Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDADKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 101 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 98/253 (38%), Gaps = 68/253 (26%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 93 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 148
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 149 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 207
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP------------- 203
+ H + Y G L QT + ++ + FSP
Sbjct: 208 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVG 267
Query: 204 --------------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSH 230
+G + ++ ++RD + +G FV ++
Sbjct: 268 LSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 327
Query: 231 REMALAAISGLNG 243
+ A AI+ LNG
Sbjct: 328 YDEAAMAIASLNG 340
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T+E++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAEKAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDAHEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T+E++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP---VAPPDKLYVGCLSKQT 192
V + ++A AI LNG + + +IKV +A HP V LY+ L +
Sbjct: 66 VNYVTAKDAERAISTLNGLRL---QSKTIKVSYA-----HPSSEVIKDANLYISGLPRTM 117
Query: 193 SKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
++K++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS
Sbjct: 118 TQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSS 176
Query: 252 QPLVVRIA 259
+P+ V+ A
Sbjct: 177 EPITVKFA 184
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + HP+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYAHPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ +A +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+++ + + A E + +F G V V + +D T + +G+ FV T +EEA AI +L
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 152 NGHYI 156
NG+ +
Sbjct: 306 NGYRL 310
>gi|157126547|ref|XP_001660922.1| hypothetical protein AaeL_AAEL010567 [Aedes aegypti]
gi|108873228|gb|EAT37453.1| AAEL010567-PA, partial [Aedes aegypti]
Length = 384
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 21/184 (11%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT--------------GQQQGYCFVK 137
L V +P+T T+E+++ LF G+V L +DK T GQ GY FV
Sbjct: 59 LIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGNWTNSGSFLSFDVGQSLGYGFVN 118
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
+ E+A AI NG + + +IKV FA + LYV LSK +++++
Sbjct: 119 YHRAEDADKAINTFNGLRL---QNKTIKVSFARPSSD--AIKGANLYVSGLSKSMTQQDL 173
Query: 198 EEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
E +F PYG I I+ D + S+G F++F R A AI LNGT T +G+ +P+ V
Sbjct: 174 EALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGT-TPKGASEPITV 232
Query: 257 RIAD 260
+ A+
Sbjct: 233 KFAN 236
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 63/274 (22%)
Query: 23 NYCSWSSDDHRHNFPDNYHSHHRRHYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDH 82
N S+ S D + + ++HR + + + + FNG + K F P+ D
Sbjct: 99 NSGSFLSFDVGQSLGYGFVNYHRA-----EDADKAINTFNGLRLQNKTIKVSFARPSSDA 153
Query: 83 INDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFE 142
I A LYV+ + ++ T++D+ LF+ +G +I + D TG +G F++F
Sbjct: 154 IKG----ANLYVSGLSKSMTQQDLEALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRS 209
Query: 143 EAGNAIRALNGHYIFPGEQASIKVRFAD---------------------GEREHPVAPPD 181
EA AI+ LNG G I V+FA+ R P P
Sbjct: 210 EAERAIQQLNGTTP-KGASEPITVKFANNPSNNINKAIPPLAAYLTPTPNLRRFPPGPIH 268
Query: 182 KL-------------------------------YVGCLSKQTSKKEIEEVFSPYGHIEDI 210
L +V L+ +T + + ++F P+G ++ +
Sbjct: 269 PLSGRFSRYSPLTGDLGTSVLSANAINGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSV 328
Query: 211 FIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+++D + + +G FV ++ + A+ A+ LNG
Sbjct: 329 KVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSLNG 362
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 98 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 157
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 158 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 211
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 212 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 261
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 168 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 223
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 224 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 282
Query: 184 YVGCLSKQTSKKEIEEVFS----------------------------------------- 202
Y G L++Q + ++ + +
Sbjct: 283 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 342
Query: 203 ------------PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 343 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 396
>gi|307168947|gb|EFN61833.1| ELAV-like protein 4 [Camponotus floridanus]
Length = 466
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 20/183 (10%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+++IR LF G V L +DK +GQ GY FV + E+A AI L
Sbjct: 30 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +FSPYG I
Sbjct: 90 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSR 144
Query: 212 IVRDELK--------------QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
I+ D + S+G F++F R A AI LNGT +GS +P+ V+
Sbjct: 145 ILCDNITVRQFVTGGGDNLPGLSKGVGFIRFDQRVEAERAIQELNGTIP-KGSSEPITVK 203
Query: 258 IAD 260
A+
Sbjct: 204 FAN 206
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ E A+ AI L
Sbjct: 291 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 350
Query: 242 NG 243
NG
Sbjct: 351 NG 352
>gi|410045110|ref|XP_003313076.2| PREDICTED: CUGBP Elav-like family member 1 [Pan troglodytes]
Length = 461
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 3/134 (2%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTG--QQQGYCFVKFTIFEEAGNAI 148
K++V VPRT +E+D+R LFE++G V E+ + +D+ Q +G CFV F + A A
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
AL+ + PG I+++ AD E+ + V KL++G +SK+ ++ +I +FS +G IE
Sbjct: 104 NALHNMKVLPGMHHPIQMKPADSEKNNAV-EDRKLFIGMISKKCTENDIRVMFSSFGQIE 162
Query: 209 DIFIVRDELKQSRG 222
+ I+R SRG
Sbjct: 163 ECRILRGPDGLSRG 176
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 170 DGEREHPVAP---PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK---QSRGC 223
+G +HP P K++VG + + S+K++ E+F YG + +I ++RD + QS+GC
Sbjct: 29 NGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGC 88
Query: 224 AFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
FV F R+ AL A + L+ + G P+ ++ AD +K E R
Sbjct: 89 CFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDR 135
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 68 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 127
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 128 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 181
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 182 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 231
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 127 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 182
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG---EREHPV 177
+ D+ TG +G F++F EA AI+ LNG PG I V+FA+ + H +
Sbjct: 183 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKVNHTI 241
Query: 178 A-----PPDKLYVGCLSKQTSKKEIEEVFS-PYGHIEDIF 211
P++ Y G L++Q + ++ + + YG I+ F
Sbjct: 242 LSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGGIKSRF 281
>gi|449514035|ref|XP_002190678.2| PREDICTED: ELAV-like protein 2-like [Taeniopygia guttata]
Length = 380
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 10/188 (5%)
Query: 76 NHPAP-DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC 134
N P+P D N L V +P+ T+E+++ LF G + L +DK TG GY
Sbjct: 52 NCPSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGPSLGYG 111
Query: 135 FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTS 193
FV + ++A A+ LNG F + +IKV +A R + D LYV L K +
Sbjct: 112 FVNYVDPKDAKKAVNTLNG---FRLQTKTIKVSYA---RPSSASIRDANLYVSGLPKTMT 165
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQ 252
+ E+E++FS YGHI I+ D++ SRG F++F R A AI GLNG G+ +
Sbjct: 166 QTELEQLFSQYGHIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATE 224
Query: 253 PLVVRIAD 260
P+ V+ A+
Sbjct: 225 PVTVKFAN 232
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 60/227 (26%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T+ ++ LF ++G++I + D+ TG +
Sbjct: 139 KVSYARPSSASIRD----ANLYVSGLPKTMTQTELEQLFSQYGHIITSRILVDQVTGVSR 194
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG-EREHPVAPPDKLYVGCLSK 190
G F++F EA AI+ LNG PG + V+FA+ ++ A P++ Y L++
Sbjct: 195 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPVTVKFANNPSQKTNQATPNRRYPAPLAQ 253
Query: 191 QTSKKEIE---------------------------------------------------- 198
Q + ++
Sbjct: 254 QAQRFRLDNLLNIAYGVKRFPPMTIDGMTALAGINISGHAGTGWCIFVYNLAPDADESIL 313
Query: 199 -EVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 314 WQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 360
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ E+++ LF G V + KD +TG G+ FV + E+A AI L
Sbjct: 97 LIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 156
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++ +I+E+FS YG+I
Sbjct: 157 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITESQIDELFSKYGNIVQKN 211
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L RG AFV+F RE A AI+ L+GT GS+ PL V+IA+
Sbjct: 212 ILRDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSE-PLSVKIAE 260
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE I LF ++GN+++ + +DK TG +
Sbjct: 167 KVSFARPSGEEIKET----NLYVTNLPRNITESQIDELFSKYGNIVQKNILRDKLTGLPR 222
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV+F EEA AI L+G
Sbjct: 223 GVAFVRFDKREEAQEAIARLHG 244
>gi|431093|gb|AAA58677.1| huc [Homo sapiens]
Length = 359
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TG+ GY FV + +A AI L
Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDADKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 101 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 212
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 98/252 (38%), Gaps = 67/252 (26%)
Query: 54 SSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEH 113
+ + + NG + K + P+ I D A LYV+ +P+T +++++ LF ++
Sbjct: 93 ADKAINTLNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQY 148
Query: 114 GNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGER 173
G +I + D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 149 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPS 207
Query: 174 E--------HPVAPPDKLYVGCLSKQTSKKEIEEV---------FSP------------- 203
+ H + Y G L QT + ++ + FSP
Sbjct: 208 QKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVG 267
Query: 204 -------------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHR 231
+G + ++ ++RD + +G FV ++
Sbjct: 268 LSGGAAGGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNY 327
Query: 232 EMALAAISGLNG 243
+ A AI+ LNG
Sbjct: 328 DEAAMAIASLNG 339
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 83 INDSGIPAK--LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
I+ +G K L V +P+T TE+D+ +F G + + KD +TG G+ FV FT
Sbjct: 52 ISSAGDAGKTNLIVNYLPQTMTEKDLYAMFMSIGPIESCRVMKDFKTGYSYGFGFVNFTR 111
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
E+A AI NG+ + +KV +A E LYV L + ++ ++E +
Sbjct: 112 EEDAARAIETFNGYQL---RNKRLKVSYARPSGED--IKETNLYVTNLPRAITEDQLETI 166
Query: 201 FSPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
F YG I I+RD+ + RG AFV+F RE A AI+ LN GS +PL V++A
Sbjct: 167 FGKYGRIVQKHILRDKSNGTPRGVAFVRFDKREEAQEAIAALNNVIPEGGS-EPLCVKVA 225
Query: 260 D 260
+
Sbjct: 226 E 226
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
++ ++ ++ + FNG + K + P+ + I ++ LYV +PR TE+ +
Sbjct: 108 NFTREEDAARAIETFNGYQLRNKRLKVSYARPSGEDIKET----NLYVTNLPRAITEDQL 163
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALN 152
+F ++G +++ + +DK G +G FV+F EEA AI ALN
Sbjct: 164 ETIFGKYGRIVQKHILRDKSNGTPRGVAFVRFDKREEAQEAIAALN 209
>gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens]
Length = 366
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ ++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 162 RILVGQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFAN 211
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 91/234 (38%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + + TG +
Sbjct: 118 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVGQVTGVSR 173
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG G I V+FA+ + P++
Sbjct: 174 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRR 232
Query: 184 YVGCLSKQTSKKEIEEV---------FSP------------------------------- 203
Y G L Q + ++ + FSP
Sbjct: 233 YPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSP 292
Query: 204 -------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 293 DSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAITSLNG 346
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like generic
protein; AltName: Full=Hu-antigen R; Short=HuR; AltName:
Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T+E++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAISTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ +A +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+++ + + A E + +F G V V + +D T + +G+ FV T +EEA AI +L
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 152 NGHYI 156
NG+ +
Sbjct: 306 NGYRL 310
>gi|363743697|ref|XP_423569.3| PREDICTED: CUGBP Elav-like family member 5 [Gallus gallus]
Length = 404
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSK 190
+G F+ + + A A AL+ PG I+V+ AD E KL+VG L+K
Sbjct: 5 KGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR---GGDRKLFVGMLNK 61
Query: 191 QTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGS 250
Q S+ ++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+
Sbjct: 62 QQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGA 121
Query: 251 DQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRP------------PPNLGNSA 298
LVV+ AD K RT F P+ P P L S
Sbjct: 122 SSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSH 181
Query: 299 GGQILPNVSYRPQHI 313
G + P V++ P HI
Sbjct: 182 GSYLSPGVAFSPCHI 196
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +E+D+ LFE G + E + + G +G FVKF+ EA AI A
Sbjct: 53 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPD-GNSKGCAFVKFSSHTEAQAAIHA 111
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
L+G PG +S+ V+FAD ++E + ++ VG L T + FSPY
Sbjct: 112 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGIFTPSLTLP--FSPY 162
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T+E++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAISTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ +A +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + +F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWRMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G+ P D +D+ L + +P+ ++E++R LF G V L +DK G GY
Sbjct: 4 GYEDPMGDEPSDA--KTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGY 61
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFA----DGEREHPVAPPDKLYVGCLS 189
FV + +A AI LNG + + +IKV +A DG ++ LY+ L
Sbjct: 62 GFVNYVNPSDAERAINTLNGLRL---QSKTIKVSYARPSSDGIKDA------NLYISGLP 112
Query: 190 KQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMR 248
K ++K +E++F+ YG I + I+ D+ SRG AF++F R A AI LNG+
Sbjct: 113 KTMTQKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIKDLNGS-KPS 171
Query: 249 GSDQPLVVRI-ADPKKPRTGEL 269
G+ +P+ V+ A+P + + +L
Sbjct: 172 GASEPITVKFAANPNQSKNSQL 193
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ D I D A LY++ +P+T T++++ +F ++G +I + D+ +G +
Sbjct: 90 KVSYARPSSDGIKD----ANLYISGLPKTMTQKNVEDMFTQYGRIINSRILVDQASGLSR 145
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFA 169
G F++F EA AI+ LNG G I V+FA
Sbjct: 146 GVAFIRFDKRSEAEEAIKDLNGSKP-SGASEPITVKFA 182
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T+E++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAISTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ +A +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+++ + + A E + +F G V V + +D T + +G+ FV T +EEA AI +L
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 152 NGHYI 156
NG+ +
Sbjct: 306 NGYRL 310
>gi|270014670|gb|EFA11118.1| hypothetical protein TcasGA2_TC004718 [Tribolium castaneum]
Length = 350
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 113/245 (46%), Gaps = 21/245 (8%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDK-----------RTGQQQGYCFVKFTI 140
L V +P+T T+E+IR LF G V L +DK TGQ GY FV +
Sbjct: 33 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTVPGVITSPLLTGQSLGYGFVNYHR 92
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
E+A AI LNG + + +IKV +A E LYV L K +++++E +
Sbjct: 93 PEDAEKAINTLNGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMTQQDLESL 147
Query: 201 FSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
FSPYG I I+ D + S+G F++F R A AI LNGT +GS +P+ V+ A
Sbjct: 148 FSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQELNGTIP-KGSTEPITVKFA 206
Query: 260 DPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSA--GGQILPNVSYRPQHIFNNS 317
+ + A+ TP F P+ P + G +L N S P + N S
Sbjct: 207 NNPSNNNKAIPPLAAYLTPQATRRFAGPIHHPTGRFRYSPLAGDLLAN-SMLPGNAMNGS 265
Query: 318 HPQVF 322
+F
Sbjct: 266 GWCIF 270
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 51/204 (25%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LYV+ +P+ T++D+ LF +G +I + D TG +G F++F EA AI+
Sbjct: 128 ANLYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQ 187
Query: 150 ALNGHYIFPGEQASIKVRFAD-------------------------GEREHP-------- 176
LNG I G I V+FA+ G HP
Sbjct: 188 ELNGT-IPKGSTEPITVKFANNPSNNNKAIPPLAAYLTPQATRRFAGPIHHPTGRFRYSP 246
Query: 177 ---------VAPPDKL-------YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQ 219
+ P + + +V L+ +T + + ++F P+G ++ + ++RD + +
Sbjct: 247 LAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNK 306
Query: 220 SRGCAFVQFSHREMALAAISGLNG 243
+G FV ++ + A+ AI LNG
Sbjct: 307 CKGFGFVTMTNYDEAVVAIQSLNG 330
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 40 LIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 99
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 100 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 153
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNG 243
I+ D++ SRG F++F R A AI GLNG
Sbjct: 154 RILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNG 187
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 54/232 (23%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 99 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 154
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG--------- 171
+ D+ TG +G F++F EA AI+ LNG P I V+FA+
Sbjct: 155 ILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQKP-PAATEPITVKFANNPSQKTNQAI 213
Query: 172 --------EREHPV----------APPDK---------------------LYVGCLSKQT 192
R +P PP ++V L+
Sbjct: 214 LSQLYHSPNRRYPAPLAQQAQRFRFPPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDA 273
Query: 193 SKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+ + ++F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 274 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 325
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 40 YHSHHRRHYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPR 99
YHS +RR Y ++ F PM G P H +G ++V +
Sbjct: 218 YHSPNRR---YPAPLAQQAQRFRFPPMTIDGMTSLAGINIPGH---AGTGWCIFVYNLAP 271
Query: 100 TATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
A E + +F G V V + +D T + +G+ FV T ++EA AI +LNG+ +
Sbjct: 272 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 328
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 34/228 (14%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
++V + T TEED+ F E G + +V+ +D G+ + + FV F E+A A+ AL
Sbjct: 206 VFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDG-DGKSKCFGFVNFENAEDAAKAVEAL 264
Query: 152 NGHYI-----FPGE-------QASIKVRFADGEREHPVAPPDK-----LYVGCLSKQTSK 194
NG I F G+ + +K RF +E DK LY+ L
Sbjct: 265 NGKKIDDKEWFVGKAQKKYEREVELKQRFEQSMKEAA----DKFQGANLYIKNLDDSIGD 320
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++++E+FSP+G I ++RD SRG FV FS E A A+ +NG + +PL
Sbjct: 321 EKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKIVV---SKPL 377
Query: 255 VVRIADPKKPRTGELRGNYA-----FGTPSFGPNFLEPVRPP--PNLG 295
V +A K+ R L+ ++ PS GP P+ PP P LG
Sbjct: 378 YVALAQRKEDRRARLQAQFSQMRPVAMAPSVGPRM--PMYPPAGPGLG 423
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ LYV + + T+ + LF + G V+ V + +D + + GY +V ++ ++A A
Sbjct: 23 VTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARA 82
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHI 207
+ LN P + I+V ++ + + +++ L K K + + FS +G+I
Sbjct: 83 LEMLN---FTPLNGSPIRVMYSHRDPTIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNI 139
Query: 208 EDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ D QS+G FVQF E A AI LNG
Sbjct: 140 LSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGML 177
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 36/223 (16%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG P+ + ++H P I SG +++ + + + + F GN++
Sbjct: 91 LNGSPIRVM-----YSHRDP-TIRKSG-AGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 143
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGH-------YIFP------GEQASIKVR 167
+ D +GQ +GY FV+F E A AI LNG Y+ P + A+ K+R
Sbjct: 144 VATDP-SGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTATDKMR 202
Query: 168 FADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQ 227
F + ++V LS+ T+++++ + F +G I I ++RD +S+ FV
Sbjct: 203 F------------NNVFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVN 250
Query: 228 FSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
F + E A A+ LNG + D+ V A K R EL+
Sbjct: 251 FENAEDAAKAVEALNGK---KIDDKEWFVGKAQKKYEREVELK 290
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 315 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 374
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 375 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 428
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 429 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 478
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 385 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 440
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 441 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 499
Query: 184 YVGCLSKQ--------------TSKKEIE--------------------------EVFSP 203
Y G L++Q TS I ++F P
Sbjct: 500 YPGPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGP 559
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 560 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 600
>gi|358333422|dbj|GAA51938.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 849
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 58/82 (70%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG L KQ ++ E+ +F+PYG IE+ ++RD+ S+GCAFV+F+ AL+AI GL
Sbjct: 109 KLFVGMLGKQQTEDELRTLFAPYGSIEECTVLRDQNGASKGCAFVKFTSNSEALSAIEGL 168
Query: 242 NGTFTMRGSDQPLVVRIADPKK 263
+ + TM+G+ PLVV+ AD +
Sbjct: 169 HNSQTMQGASSPLVVKFADTDR 190
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + TE+++R LF +G++ E + +D+ G +G FVKFT EA +AI
Sbjct: 109 KLFVGMLGKQQTEDELRTLFAPYGSIEECTVLRDQN-GASKGCAFVKFTSNSEALSAIEG 167
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
L+ G + + V+FAD +RE
Sbjct: 168 LHNSQTMQGASSPLVVKFADTDRE 191
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 48 LIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 107
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 108 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 161
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNG 243
I+ D++ SRG F++F R A AI GLNG
Sbjct: 162 RILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNG 195
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 107 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 162
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG P I V+FA+
Sbjct: 163 ILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQKP-PAATEPITVKFAN 211
>gi|195456590|ref|XP_002075201.1| GK16696 [Drosophila willistoni]
gi|194171286|gb|EDW86187.1| GK16696 [Drosophila willistoni]
Length = 508
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 10/189 (5%)
Query: 75 FNHPAP-DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
F+ P P ++ D L + +P+ T+ ++ LF G++ + +D +TG GY
Sbjct: 96 FSSPTPGNNPEDRTSATNLIINYLPQDMTDRELYNLFSSCGSINTCKIMRDFKTGYSFGY 155
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQT 192
FV + ++ +AI+ LNG Y+ +KV +A R + D LYV LS+
Sbjct: 156 GFVDYNAEADSEDAIQKLNGFYV---RNKRLKVSYA---RPGGQSIKDTNLYVINLSRNI 209
Query: 193 SKKEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
+ + ++ +FSP+G I I+RD+L + RG AFV+++ RE A AI LN T GS
Sbjct: 210 NDEMLDRIFSPFGQIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKSLNNTIPEGGS- 268
Query: 252 QPLVVRIAD 260
QP+ VR+A+
Sbjct: 269 QPIWVRLAE 277
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P I D+ LYV + R +E + +F G +++ + +DK TG+ +
Sbjct: 184 KVSYARPGGQSIKDT----NLYVINLSRNINDEMLDRIFSPFGQIVQRNILRDKLTGRPR 239
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV++ EEA AI++LN + I G I VR A+
Sbjct: 240 GVAFVRYNKREEAQEAIKSLN-NTIPEGGSQPIWVRLAE 277
>gi|81914424|sp|Q8CH84.1|ELAV2_RAT RecName: Full=ELAV-like protein 2; AltName: Full=Hu-antigen B;
Short=HuB
gi|27374986|dbj|BAC53775.1| RNA binding protein HuB [Rattus norvegicus]
Length = 359
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 97 VPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
+P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI LNG +
Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL 105
Query: 157 FPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD 215
+ +IKV +A R + D LYV L K ++KE+E++FS YG I I+ D
Sbjct: 106 ---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVD 159
Query: 216 ELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 160 QVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 67/234 (28%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG PG I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQTSKKEIEEV------------------------------------------- 200
Y G L++Q + ++ +
Sbjct: 226 YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAP 285
Query: 201 ----------FSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
F P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 DADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 339
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD-KRTGQQQGYCFVKFTIFEEAGNAIRA 150
L V +P+ TE ++ +F G + L +D K+TG G+ FV + E A AI+
Sbjct: 84 LIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC 143
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
LNG +P +KV +A + + LY+ L + ++++++ +F YG I
Sbjct: 144 LNG---YPLRNKRLKVSYARPQSDD--IKETNLYITNLPRTITEEQLDIIFGKYGTIVQK 198
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L Q RG AFV+F+ RE A AIS LN +G +QPL+VR+A+
Sbjct: 199 NILRDKLTGQPRGVAFVRFNKREEAQEAISALNNVIP-QGGNQPLIVRVAE 248
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y ++ + NG P+ K + P D I ++ LY+ +PRT TEE +
Sbjct: 130 NYLNEEAAQRAIKCLNGYPLRNKRLKVSYARPQSDDIKET----NLYITNLPRTITEEQL 185
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKV 166
+F ++G +++ + +DK TGQ +G FV+F EEA AI ALN + I G + V
Sbjct: 186 DIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFNKREEAQEAISALN-NVIPQGGNQPLIV 244
Query: 167 RFAD 170
R A+
Sbjct: 245 RVAE 248
>gi|49119672|gb|AAH72716.1| Zgc:91918 [Danio rerio]
Length = 360
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS +G I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 155 RILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQ-KPPGATEPITVKFAN 204
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 68/260 (26%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y + + + + NG + K + P+ I D A LYV+ +P+T T++++
Sbjct: 86 NYMEPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKEL 141
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKV 166
LF + G +I + D+ TG +G F++F EA AI+ LNG PG I V
Sbjct: 142 EQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKP-PGATEPITV 200
Query: 167 RFADGERE--------HPVAPPDKLYVGCLSKQTSKKEIEEV----------FSP----- 203
+FA+ + H P++ Y G L++Q + ++ + FSP
Sbjct: 201 KFANNPSQKSSQALLSHLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDG 260
Query: 204 ---------------------------------------YGHIEDIFIVRD-ELKQSRGC 223
+G + ++ ++RD + +G
Sbjct: 261 VTSLAGINLPAHAGTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGF 320
Query: 224 AFVQFSHREMALAAISGLNG 243
FV ++ + A AI+ LNG
Sbjct: 321 GFVTMTNYDEAAVAIASLNG 340
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKD-KRTGQQQGYCFVKFTIFEEAGNAIRA 150
L V +P+ TE ++ +F G + L +D K+TG G+ FV + E A AI+
Sbjct: 106 LIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC 165
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
LNG +P +KV +A + + LY+ L + ++++++ +F YG I
Sbjct: 166 LNG---YPLRNKRLKVSYARPQSDD--IKETNLYITNLPRTITEEQLDIIFGKYGTIVQK 220
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L Q RG AFV+F+ RE A AIS LN +G +QPL+VR+A+
Sbjct: 221 NILRDKLTGQPRGVAFVRFNKREEAQEAISALNNVIP-QGGNQPLIVRVAE 270
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y ++ + NG P+ K + P D I ++ LY+ +PRT TEE +
Sbjct: 152 NYLNEEAAQRAIKCLNGYPLRNKRLKVSYARPQSDDIKET----NLYITNLPRTITEEQL 207
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKV 166
+F ++G +++ + +DK TGQ +G FV+F EEA AI ALN + I G + V
Sbjct: 208 DIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFNKREEAQEAISALN-NVIPQGGNQPLIV 266
Query: 167 RFAD 170
R A+
Sbjct: 267 RVAE 270
>gi|452823093|gb|EME30106.1| RNA-binding protein [Galdieria sulphuraria]
Length = 477
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P K+++ +P EED+R + E +G V+E + +++ T Q +G F F EEA NAI
Sbjct: 39 PCKIFIGQLPSNVVEEDLRRICEPYGTVLETTIVRNRMTNQSRGCGFCVFHNREEADNAI 98
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE 208
+AL+G FP ++VR A+ + KLY+G L ++++ F+ +G I
Sbjct: 99 QALHGTKPFPSGSKPLQVRLAEKNSDFSET---KLYIGHLEPIVEEQQLRNAFTKFGEIV 155
Query: 209 DIFIVR-----DELKQSRGCAFVQFSHREMALAAI-SGLNGTFTMRGSDQPLVVRIADPK 262
D+ IVR ++ FV+FS E A AI S NG + VR A
Sbjct: 156 DVNIVRPRNVDNQHNSPYNYGFVEFSGNEAADNAILSAKNGQVWLENGKPLTEVRYARLS 215
Query: 263 KPRTGELRGNY 273
+ R G Y
Sbjct: 216 RNRYGRNSDGY 226
>gi|302832507|ref|XP_002947818.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
gi|300267166|gb|EFJ51351.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
Length = 1966
Score = 88.2 bits (217), Expect = 1e-14, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
Query: 49 QYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRP 108
Q + S P + QP G + G P P H +L+V VPRTA E +R
Sbjct: 2 QLESASQPPPAELSTQPA---GSESG--DPPPLH--------RLFVGSVPRTAVEATLRE 48
Query: 109 LFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRF 168
FE+ G V ++ + +D+ +G+ +G FV + EEA AI+ + + PG Q ++VRF
Sbjct: 49 YFEQCGVVRDLAVLRDRTSGKSRGCAFVSYLTLEEAEAAIQKFDRQLMLPGSQTPLEVRF 108
Query: 169 ADGER-----EHPVAP--------PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVR- 214
A E P P L V C + EI +F YG +E I + +
Sbjct: 109 AKNHSYVQAGEGPSGNRQIFFSRVPLTLKV-CHHVAYEEDEILSLFLAYGEVETINVFKC 167
Query: 215 DELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+S+GC F++ RE A+AA+ L+ + + VR ADP
Sbjct: 168 RRSGRSKGCGFIEMRTREAAIAAMENLDERHVFDSTGTAISVRWADP 214
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 103 EEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQA 162
E++I LF +G V + + K +R+G+ +G F++ E A A+ L+ ++F
Sbjct: 146 EDEILSLFLAYGEVETINVFKCRRSGRSKGCGFIEMRTREAAIAAMENLDERHVFDSTGT 205
Query: 163 SIKVRFADGEREH--------PVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVR 214
+I VR+AD + + A L+ + + T++ ++ +FS +G + DI + R
Sbjct: 206 AISVRWADPDLQQRKKKAMDDANAENRMLFFAKVLRSTTEDDVRRLFSRFGKVYDINLFR 265
Query: 215 --DELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
++GC V S A+AAI+ L+G G D P+VV+ D
Sbjct: 266 AFQGAPTTKGCGLVTMSQHSDAVAAIAALDGIHVWEGMDCPMVVKWMD 313
Score = 48.5 bits (114), Expect = 0.008, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL++ +PR TE+ + LF+ G V+E+V+ DK T + +G FV + E+A AI
Sbjct: 522 KLFIGNIPRGCTEKHLLALFQSIGKVVELVIMYDKVTREPKGSAFVWYATREDAERAILQ 581
Query: 151 LNGHYIFP 158
N +FP
Sbjct: 582 FNLRPVFP 589
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 25 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 83
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 84 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 138
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 139 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 197
Query: 255 VVRIA 259
V+ A
Sbjct: 198 TVKFA 202
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 110 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 165
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 166 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 224
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 225 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 284
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 285 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 325
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 20/183 (10%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+++IR LF G V L +DK TGQ GY FV + E+A AI L
Sbjct: 30 LIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +F+PYG I
Sbjct: 90 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMTQQDLENLFNPYGRIITSR 144
Query: 212 IVRDELK--------------QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
I+ D + S+G F++F R A AI LNGT +GS +P+ V+
Sbjct: 145 ILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTVP-KGSSEPITVK 203
Query: 258 IAD 260
A+
Sbjct: 204 FAN 206
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ + A+ AI L
Sbjct: 290 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 349
Query: 242 NG 243
NG
Sbjct: 350 NG 351
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 20/183 (10%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P++ T+++IR LF G V L +DK TGQ GY FV + E+A AI L
Sbjct: 30 LIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E LYV L K +++++E +F+PYG I
Sbjct: 90 NGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMTQQDLENLFNPYGRIITSR 144
Query: 212 IVRDELK--------------QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
I+ D + S+G F++F R A AI LNGT +GS +P+ V+
Sbjct: 145 ILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELNGTVP-KGSSEPITVK 203
Query: 258 IAD 260
A+
Sbjct: 204 FAN 206
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ + A+ AI L
Sbjct: 290 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 349
Query: 242 NG 243
NG
Sbjct: 350 NG 351
>gi|221112748|ref|XP_002162771.1| PREDICTED: ELAV-like protein 3-like [Hydra magnipapillata]
Length = 376
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P L + +P+ TEE++R LF G + L +DK T GY FV + +A AI
Sbjct: 44 PTNLIINYLPQEMTEEELRTLFSSVGPLESCKLIRDKVTRASLGYAFVNYQHAADARKAI 103
Query: 149 RALNGHYIFPGEQASIKVRFADGEREHPVAPPDK---LYVGCLSKQTSKKEIEEVFSPYG 205
+L G + +IKV A P K LYV L ++ ++ E+F+ YG
Sbjct: 104 ESLQGMKL---TNKTIKVSVA-----RPSCTEIKNANLYVSGLPLTCNENDLRELFASYG 155
Query: 206 HIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTF-TMRGSDQPLVVRIADP 261
I I ++ +E QSRG FV+F R A AAI+GLN + G+ +PL V+ A+P
Sbjct: 156 SIITIKVLYEESGQSRGVGFVRFDKRNDAEAAINGLNNRIPEINGAIKPLTVKFANP 212
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGL 241
++V L S+ + ++FS +G I+ +V DE K+ +G FV +H E A AI L
Sbjct: 290 VFVYNLPSDASELTLFQLFSKFGAIQSTRVVYDENTKKCKGFGFVNMAHYEDATMAILHL 349
Query: 242 NGTFTMRGSDQPLVVRIADPK 262
NG RG +PL V P+
Sbjct: 350 NGYCCERG--KPLQVSFKRPR 368
>gi|6456838|emb|CAA04179.2| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 307
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 84 NDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEE 143
N+SG L V +P+ + ++ LF G + + +D +TG GY FV F +
Sbjct: 60 NNSG--TNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEAD 117
Query: 144 AGNAIRALNGHYIFPGEQASIKVRFA--DGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
A AI LNG + IKV FA GE+ LYV LS+ + +++E +F
Sbjct: 118 ALRAINNLNGITV---RNKRIKVSFARPGGEQLRDT----NLYVTNLSRSITDEQLETIF 170
Query: 202 SPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
YG I I+RD+ + RG AF++F+ RE A AIS LN G QPL VR+A+
Sbjct: 171 GKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVIP-EGGTQPLTVRVAE 229
Query: 261 PKKPRTGELRGNYAFGTPSFGPNFLEPVRPP------PNLGNSAGGQI 302
G + ++ P +PP N+GN G +
Sbjct: 230 EHGKSKGHV--------------YMAPNQPPHGNMGHGNMGNMGHGNM 263
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P + + D+ LYV + R+ T+E + +F ++G +++ + +DK TG +
Sbjct: 136 KVSFARPGGEQLRDT----NLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPR 191
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EEA AI ALN + I G + VR A+
Sbjct: 192 GVAFIRFNKREEAQEAISALN-NVIPEGGTQPLTVRVAE 229
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRNMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PR T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|30179878|sp|O01671.3|SXL_MEGSC RecName: Full=Sex-lethal homolog
gi|9743624|emb|CAC01696.1| sex-lethal homologue [Megaselia scalaris]
Length = 321
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 84 NDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEE 143
N+SG L V +P+ + ++ LF G + + +D +TG GY FV F +
Sbjct: 74 NNSG--TNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEAD 131
Query: 144 AGNAIRALNGHYIFPGEQASIKVRFA--DGEREHPVAPPDKLYVGCLSKQTSKKEIEEVF 201
A AI LNG + IKV FA GE+ LYV LS+ + +++E +F
Sbjct: 132 ALRAINNLNGITV---RNKRIKVSFARPGGEQLRDT----NLYVTNLSRSITDEQLETIF 184
Query: 202 SPYGHIEDIFIVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
YG I I+RD+ + RG AF++F+ RE A AIS LN G QPL VR+A+
Sbjct: 185 GKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVIP-EGGTQPLTVRVAE 243
Query: 261 PKKPRTGELRGNYAFGTPSFGPNFLEPVRPP------PNLGNSAGGQI 302
G + ++ P +PP N+GN G +
Sbjct: 244 EHGKSKGHV--------------YMAPNQPPHGNMGHGNMGNMGHGNM 277
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P + + D+ LYV + R+ T+E + +F ++G +++ + +DK TG +
Sbjct: 150 KVSFARPGGEQLRDT----NLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPR 205
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G F++F EEA AI ALN + I G + VR A+
Sbjct: 206 GVAFIRFNKREEAQEAISALN-NVIPEGGTQPLTVRVAE 243
>gi|350580719|ref|XP_003123087.3| PREDICTED: CUGBP, Elav-like family member 5 [Sus scrofa]
Length = 444
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 129 QQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCL 188
+Q G F+ + + A A AL+ PG I+V+ AD E KL+VG L
Sbjct: 43 KQAGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGML 100
Query: 189 SKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMR 248
+KQ S++++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM
Sbjct: 101 NKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMP 160
Query: 249 GSDQPLVVRIADPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNS 297
G+ LVV+ AD K RT ++ G TPS F ++ + ++
Sbjct: 161 GASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLST 220
Query: 298 AGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPI 334
+G + P V++ P HI Q+ + N ATPI
Sbjct: 221 SGSYLSPGVAFSPCHI-----QQIGAVSLNGLPATPI 252
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +EED+ LF+ G + E + + G +G FVKF+ EA AI A
Sbjct: 94 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPD-GSSKGCAFVKFSSHTEAQAAIHA 152
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
L+G PG +S+ V+FAD ++E + ++ VG L T + FSPY
Sbjct: 153 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGILTPSLTLP--FSPY 203
>gi|395513595|ref|XP_003761008.1| PREDICTED: CUGBP Elav-like family member 5 [Sarcophilus harrisii]
Length = 429
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 122 PKDKRTGQQQGYC-FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPP 180
P + T + +C F+ + + A A AL+ PG I+V+ AD E
Sbjct: 18 PWENDTKGEITWCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRD 75
Query: 181 DKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISG 240
KL+VG L+KQ S++++ +F P+G I++ ++R S+GCAFV+FS A AAI
Sbjct: 76 RKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHA 135
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRP---------- 290
L+G+ TM G+ LVV+ AD K RT F P+ P P
Sbjct: 136 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQ 195
Query: 291 --PPNLGNSAGGQILPNVSYRPQHI 313
L S G + P V++ P HI
Sbjct: 196 QQTTVLSTSHGSYLSPGVAFSPCHI 220
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +EED+ LF+ G + E + + G +G FVKF+ EA AI A
Sbjct: 77 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGP-DGNSKGCAFVKFSSHTEAQAAIHA 135
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
L+G PG +S+ V+FAD ++E + ++ VG L T + FSPY
Sbjct: 136 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGIFTPSLTLP--FSPY 186
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINTL 129
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS +G I
Sbjct: 130 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITS 183
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A+
Sbjct: 184 RILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQ-KPPGATEPITVKFAN 233
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 68/260 (26%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y + + + + NG + K + P+ I D A LYV+ +P+T T++++
Sbjct: 115 NYMEPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKEL 170
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKV 166
LF + G +I + D+ TG +G F++F EA AI+ LNG PG I V
Sbjct: 171 EQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKP-PGATEPITV 229
Query: 167 RFADGERE--------HPVAPPDKLYVGCLSKQTSKKEIEEV----------FSP----- 203
+FA+ + H P++ Y G L++Q + ++ + FSP
Sbjct: 230 KFANNPSQKSSQALLSHLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDG 289
Query: 204 ---------------------------------------YGHIEDIFIVRD-ELKQSRGC 223
+G + ++ ++RD + +G
Sbjct: 290 VTSLAGINLPAHAGTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGF 349
Query: 224 AFVQFSHREMALAAISGLNG 243
FV ++ + A AI+ LNG
Sbjct: 350 GFVTMTNYDEAAVAIASLNG 369
>gi|449270204|gb|EMC80905.1| CUG-BP- and ETR-3-like factor 5, partial [Columba livia]
Length = 403
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQ 191
G F+ + + A A AL+ PG I+V+ AD E KL+VG L+KQ
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQ 58
Query: 192 TSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
S+ ++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+
Sbjct: 59 QSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 118
Query: 252 QPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRP------------PPNLGNSAG 299
LVV+ AD K RT F P+ P P L S G
Sbjct: 119 SSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLTLPFSPYSAYAQALMQQQTTVLSTSHG 178
Query: 300 GQILPNVSYRPQHI 313
+ P V++ P HI
Sbjct: 179 SYLSPGVAFSPCHI 192
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +E+D+ LFE G + E + + G +G FVKF+ EA AI A
Sbjct: 49 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPD-GNSKGCAFVKFSSHTEAQAAIHA 107
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
L+G PG +S+ V+FAD ++E + ++ VG L T + FSPY
Sbjct: 108 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGIFTPSLTLP--FSPY 158
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 11/172 (6%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ TE ++ +F G V + +D RTG G+ FV + ++A AI+ L
Sbjct: 29 LIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAIQTL 88
Query: 152 NGHYIFPGEQASIKVRFAD--GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIED 209
NG I + IKV +A GE LYV L + ++ E+ +FS +G+I
Sbjct: 89 NGLQI---QNKRIKVSYARPPGEDRKET----NLYVTNLPRDVTEDELTNIFSAHGNIVQ 141
Query: 210 IFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
+ +++D++ RG AFV+F RE ALAAI LNGT G P+ V+IA+
Sbjct: 142 MNLLKDKITGMPRGVAFVRFDKREEALAAIEHLNGTIP-HGRTNPISVKIAE 192
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 10 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 68
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 69 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 123
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 124 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 182
Query: 255 VVRIA 259
V+ A
Sbjct: 183 TVKFA 187
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 95 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 150
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 151 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 209
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 210 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 269
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 270 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 310
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLY 200
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 17 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 75
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 76 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 130
Query: 196 EIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 131 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 189
Query: 255 VVRIA 259
V+ A
Sbjct: 190 TVKFA 194
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 102 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 157
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ +A +LY
Sbjct: 158 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARR 216
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 217 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPSNASSGWCIFIYNLGQDADEGILWQMFGP 276
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 277 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 317
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT-------GQQQGYCFVKFTIFEEA 144
L V +P+T TEE+IR LF G V V L +DK GQ GY FV F ++A
Sbjct: 36 LIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNFHRSQDA 95
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
A+ LNG + + +KV FA E LY+ L K +++E+E +F PY
Sbjct: 96 EQAVNVLNGLRL---QNKVLKVSFARPSSEG--IKGANLYISGLPKTITQEELETIFRPY 150
Query: 205 GH-IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
G I +V++ + +G F++F R+ A AI+ LNGT T +G P+ V+ ++
Sbjct: 151 GEIITSRVLVQEGNDKPKGVGFIRFDQRKEAERAIAALNGT-TPKGLTDPITVKFSN 206
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 63/256 (24%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
++ Q + + + NG + K F P+ + I A LY++ +P+T T+E++
Sbjct: 88 NFHRSQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKG----ANLYISGLPKTITQEEL 143
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNG------------- 153
+F +G +I + + + +G F++F +EA AI ALNG
Sbjct: 144 ETIFRPYGEIITSRVLVQEGNDKPKGVGFIRFDQRKEAERAIAALNGTTPKGLTDPITVK 203
Query: 154 HYIFPGEQASIKV-----------------------------RFA--DGE---REHPVAP 179
PG+ + K+ RF+ GE P AP
Sbjct: 204 FSNTPGQNTAAKIVQPALPTFLNPQLTRRLGAIHHPINKGLARFSPMGGEVLDMMLPTAP 263
Query: 180 PD-----------KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQ 227
+++ L+ +T + + ++F P+G ++++ +++D Q +G FV
Sbjct: 264 TTGIGAIAPSGGWSIFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDSATNQCKGYGFVT 323
Query: 228 FSHREMALAAISGLNG 243
++ E A+ AI LNG
Sbjct: 324 MTNYEEAMLAIRSLNG 339
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 102 TEED-IRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
TEE+ + LF G V V + KD T Q +GY FV T +EEA AIR+LNG+ +
Sbjct: 287 TEENTLWQLFGPFGAVQNVKVIKDSATNQCKGYGFVTMTNYEEAMLAIRSLNGYTL 342
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 101 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 154
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNG 243
I+ D++ SRG F++F R A AI GLNG
Sbjct: 155 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 188
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 55/222 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 111 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 166
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP--------VAPPDKL 183
G F++F EA AI+ LNG P I V+FA+ + P++
Sbjct: 167 GVGFIRFDKRIEAEEAIKGLNGQKP-PSATEPITVKFANNPSQKTNQAILSQLYQSPNRR 225
Query: 184 YVGCLSKQ---------------TSKKEIE--------------------------EVFS 202
Y G L++Q TS I ++F
Sbjct: 226 YPGPLAQQAQRFSRFSPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFG 285
Query: 203 PYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
P+G + ++ ++RD + +G FV ++ + A AI+ LNG
Sbjct: 286 PFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNG 327
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRSMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PR+ T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFA 169
G F++F EA AI NGH PG I V+FA
Sbjct: 148 GVAFIRFDKRSEAEEAITNFNGHKP-PGSSEPITVKFA 184
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 55 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 113
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 114 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 168
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 169 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 227
Query: 255 VVRIA 259
V+ A
Sbjct: 228 TVKFA 232
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 140 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 195
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 196 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 254
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 255 FGGPVHHQAQRFRFSPMGVDHMTGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 314
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 315 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 355
>gi|387196968|gb|AFJ68786.1| elav-like protein 2, partial [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 18/212 (8%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P + +R LF++ G V + ++K +G+ GY FVK+ + A +AI
Sbjct: 118 LIVNYLPNEIDDMGLRELFQDFGQVESARVIREKGSGRSLGYGFVKYKDPQSADSAILTR 177
Query: 152 NGHYIFPGEQASIKV-RFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGH-IED 209
NGH ++ G++ + V R A E +H KLYV L +K E+ ++F+P+G IE
Sbjct: 178 NGHQVY-GKRIKVSVARPASEEHKH-----TKLYVANLPHHFTKAEVIQLFAPHGRIIEC 231
Query: 210 IFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGEL 269
++ + RG AFVQ++ R+ A AAI L+ T M G +PL+V++AD K +
Sbjct: 232 RLLMEANSGRFRGIAFVQYNTRQEAAAAIRSLHDT-PMEGVPRPLIVKLADDKGDHS--- 287
Query: 270 RGNYAFGTPSFGPNFLEPVRPPPNLGNSAGGQ 301
RG GT S G P+R G SAG Q
Sbjct: 288 RGWQQQGTGSGG---YGPMR---GTGQSAGAQ 313
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KLYVA +P T+ ++ LF HG +IE L + +G+ +G FV++ +EA AIR+
Sbjct: 203 KLYVANLPHHFTKAEVIQLFAPHGRIIECRLLMEANSGRFRGIAFVQYNTRQEAAAAIRS 262
Query: 151 LNGHYIFPGEQASIKVRFADGEREH 175
L+ G + V+ AD + +H
Sbjct: 263 LH-DTPMEGVPRPLIVKLADDKGDH 286
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMTGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 53/220 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG-----------------ERE 174
G F++F EA AI + NGH PG I V+FA R
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 175 HPVAPPDK------------------------------LYVGCLSKQTSKKEIEEVFSPY 204
PP K +++ L + + + ++F P+
Sbjct: 207 FGGPPPSKGRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPF 266
Query: 205 GHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 GAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 306
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 52 QMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHIND-SGI--PAK------LYVAPVPRTAT 102
Q+ P F G P P GR R F+ DH++ SG+ P +++ + + A
Sbjct: 198 QLYHSPARRFGGPP-PSKGRFR-FSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDAD 255
Query: 103 EEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
E + +F G V V + +D T + +G+ FV T +EEA AI +LNG+ +
Sbjct: 256 EGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRL 309
>gi|426229025|ref|XP_004008594.1| PREDICTED: ELAV-like protein 3 isoform 2 [Ovis aries]
Length = 318
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 102 TEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQ 161
T+++ + LF G++ L +DK TGQ GY FV ++ +A AI LNG + +
Sbjct: 2 TQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKL---QT 58
Query: 162 ASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ- 219
+IKV +A R + D LYV L K S+KE+E++FS YG I I+ D++
Sbjct: 59 KTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGV 115
Query: 220 SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 116 SRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 163
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 51 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 106
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 107 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFAN 155
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 130 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 183
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNG 243
I+ D++ SRG F++F R A AI GLNG
Sbjct: 184 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 217
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 68/246 (27%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 129 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 184
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP---- 176
+ D+ TG +G F++F EA AI+ LNG P I V+FA+ +
Sbjct: 185 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP-PSATEPITVKFANNPSQKTNQAI 243
Query: 177 ----VAPPDKLYVGCLSKQTSKKEIEEV----------FSP------------------- 203
P++ Y G L++Q + ++ + FSP
Sbjct: 244 LSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHAG 303
Query: 204 -------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAA 237
+G + ++ ++RD + +G FV ++ + A A
Sbjct: 304 TGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 363
Query: 238 ISGLNG 243
I+ LNG
Sbjct: 364 IASLNG 369
>gi|189233813|ref|XP_971256.2| PREDICTED: similar to RNA-binding protein, putative [Tribolium
castaneum]
Length = 352
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 113/248 (45%), Gaps = 24/248 (9%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDK--------------RTGQQQGYCFVK 137
L V +P+T T+E+IR LF G V L +DK TGQ GY FV
Sbjct: 32 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGMKLPGVITSPLLTGQSLGYGFVN 91
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
+ E+A AI LNG + + +IKV +A E LYV L K +++++
Sbjct: 92 YHRPEDAEKAINTLNGLRL---QNKTIKVSYARPSSE--AIKGANLYVSGLPKNMTQQDL 146
Query: 198 EEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
E +FSPYG I I+ D + S+G F++F R A AI LNGT +GS +P+ V
Sbjct: 147 ESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQELNGTIP-KGSTEPITV 205
Query: 257 RIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSA--GGQILPNVSYRPQHIF 314
+ A+ + A+ TP F P+ P + G +L N S P +
Sbjct: 206 KFANNPSNNNKAIPPLAAYLTPQATRRFAGPIHHPTGRFRYSPLAGDLLAN-SMLPGNAM 264
Query: 315 NNSHPQVF 322
N S +F
Sbjct: 265 NGSGWCIF 272
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 51/204 (25%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LYV+ +P+ T++D+ LF +G +I + D TG +G F++F EA AI+
Sbjct: 130 ANLYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQ 189
Query: 150 ALNGHYIFPGEQASIKVRFAD-------------------------GEREHP-------- 176
LNG I G I V+FA+ G HP
Sbjct: 190 ELNGT-IPKGSTEPITVKFANNPSNNNKAIPPLAAYLTPQATRRFAGPIHHPTGRFRYSP 248
Query: 177 ---------VAPPDKL-------YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQ 219
+ P + + +V L+ +T + + ++F P+G ++ + ++RD + +
Sbjct: 249 LAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNK 308
Query: 220 SRGCAFVQFSHREMALAAISGLNG 243
+G FV ++ + A+ AI LNG
Sbjct: 309 CKGFGFVTMTNYDEAVVAIQSLNG 332
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 128
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 129 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 182
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNG 243
I+ D++ SRG F++F R A AI GLNG
Sbjct: 183 RILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG 216
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 128 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 183
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+ D+ TG +G F++F EA AI+ LNG P I V+FA+
Sbjct: 184 ILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKP-PSAAEPITVKFAN 232
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 34 DHMAEDCRGDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 92
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 93 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 147
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 148 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 206
Query: 255 VVRIA 259
V+ A
Sbjct: 207 TVKFA 211
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 119 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 174
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 175 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 233
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 234 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 293
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 294 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 334
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 126 DHMAEDCRGDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 184
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 185 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 239
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 240 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 298
Query: 255 VVRIA 259
V+ A
Sbjct: 299 TVKFA 303
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 211 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 266
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 267 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 325
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 326 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 385
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 386 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 426
>gi|67968717|dbj|BAE00717.1| unnamed protein product [Macaca fascicularis]
Length = 326
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRGDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 57/240 (23%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFEP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPK 262
+G + ++ ++RD + +G FV ++ E A AI+ LNG R D+ L V + K
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG---YRLGDKILQVSLKTNK 323
>gi|395850847|ref|XP_003797985.1| PREDICTED: ELAV-like protein 3 isoform 1 [Otolemur garnettii]
gi|397520901|ref|XP_003830546.1| PREDICTED: ELAV-like protein 3 isoform 1 [Pan paniscus]
gi|402904297|ref|XP_003914983.1| PREDICTED: ELAV-like protein 3 isoform 1 [Papio anubis]
gi|403302356|ref|XP_003941826.1| PREDICTED: ELAV-like protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|410950488|ref|XP_003981937.1| PREDICTED: ELAV-like protein 3 isoform 2 [Felis catus]
gi|14280337|gb|AAK57545.1| Hu antigen C long [Homo sapiens]
Length = 318
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 102 TEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQ 161
T+++ + LF G++ L +DK TGQ GY FV ++ +A AI LNG + +
Sbjct: 2 TQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKL---QT 58
Query: 162 ASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ- 219
+IKV +A R + D LYV L K S+KE+E++FS YG I I+ D++
Sbjct: 59 KTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGV 115
Query: 220 SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 116 SRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 163
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 51 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 106
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD--------GE 172
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 107 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 165
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
H + Y G L QT + ++ + + YG
Sbjct: 166 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 199
>gi|397520903|ref|XP_003830547.1| PREDICTED: ELAV-like protein 3 isoform 2 [Pan paniscus]
Length = 311
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 102 TEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQ 161
T+++ + LF G++ L +DK TGQ GY FV ++ +A AI LNG + +
Sbjct: 2 TQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKL---QT 58
Query: 162 ASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ- 219
+IKV +A R + D LYV L K S+KE+E++FS YG I I+ D++
Sbjct: 59 KTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGV 115
Query: 220 SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
SRG F++F R A AI GLNG + G+ +P+ V+ A+ +TG+
Sbjct: 116 SRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQ 163
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 51 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 106
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD--------GE 172
+ D+ TG +G F++F EA AI+ LNG G I V+FA+
Sbjct: 107 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQKTGQAL 165
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFS-PYG 205
H + Y G L QT + ++ + + YG
Sbjct: 166 LTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 199
>gi|342837655|tpg|DAA34917.1| TPA_inf: embryonic lethal abnormal vision 1-like protein [Schmidtea
mediterranea]
Length = 466
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 86/170 (50%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P T+E++R LF G V L +DK TG+ GY FVKF +A AI+ L
Sbjct: 105 LIVNYLPPNMTQEEVRALFTSIGEVESCKLVRDKTTGESLGYAFVKFVRPNDAEKAIKTL 164
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV A E LY+ L K+ ++ E+EE FS G I
Sbjct: 165 NGLRL---QNKTIKVSLARPSSESIKGA--NLYICGLPKKMTQVELEEQFSQCGKIITAR 219
Query: 212 IVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + SRG AF++F R A AI LNG S +P+ V+ A+
Sbjct: 220 ILYDNKTGLSRGVAFIRFDQRCEAEMAIKKLNGHMP-DNSSEPITVKFAN 268
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LY+ +P+ T+ ++ F + G +I + D +TG +G F++F EA AI+
Sbjct: 189 ANLYICGLPKKMTQVELEEQFSQCGKIITARILYDNKTGLSRGVAFIRFDQRCEAEMAIK 248
Query: 150 ALNGHYIFPGEQAS-IKVRFAD 170
LNGH P + I V+FA+
Sbjct: 249 KLNGH--MPDNSSEPITVKFAN 268
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE-LKQSRGCAFVQFSHREMALAAISGL 241
++V LS +T + + ++F P+G ++ + IVRD + +G FV S+ E AL +I L
Sbjct: 357 IFVYNLSPETEEATLWQLFGPFGAVQTVKIVRDSTTNKCKGFGFVTMSNYEEALLSIQSL 416
Query: 242 NG 243
NG
Sbjct: 417 NG 418
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 17 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 75
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A A+ LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 76 VNYVTAKDAERAVNTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRNMTQK 130
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 131 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 189
Query: 255 VVRIA 259
V+ A
Sbjct: 190 TVKFA 194
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PR T++D+ +F G +I + D+ TG +
Sbjct: 102 KVSYARPSSEVIKD----ANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 157
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ +A +LY
Sbjct: 158 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARR 216
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 217 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 276
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 277 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 317
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMADDCRGDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGINVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|328700229|ref|XP_003241188.1| PREDICTED: ELAV-like protein 4-like isoform 2 [Acyrthosiphon pisum]
Length = 392
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T T+E+IR LF G V L +DK TGQ GY FV + E+A AI L
Sbjct: 38 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYHRPEDAEKAINTL 97
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE--- 208
NG + + +IKV FA E LYV L K +++++E +FSPYG I
Sbjct: 98 NGLRL---QNKTIKVSFARPSSE--AIKGANLYVSGLPKHMTQQDLENLFSPYGRIITSR 152
Query: 209 ---DIFIVRDELKQSRG-----CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
D VR + + G F++F R A AI LNGT +GS + + V+ A+
Sbjct: 153 ILCDNMTVRQFVGNTGGDHSPCVGFIRFDQRIEAERAIQELNGTVP-KGSTESITVKFAN 211
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ + A+ AI L
Sbjct: 296 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 355
Query: 242 NG 243
NG
Sbjct: 356 NG 357
>gi|328700227|ref|XP_001951393.2| PREDICTED: ELAV-like protein 4-like isoform 1 [Acyrthosiphon pisum]
Length = 383
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+T T+E+IR LF G V L +DK TGQ GY FV + E+A AI L
Sbjct: 38 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYHRPEDAEKAINTL 97
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIE--- 208
NG + + +IKV FA E LYV L K +++++E +FSPYG I
Sbjct: 98 NGLRL---QNKTIKVSFARPSSE--AIKGANLYVSGLPKHMTQQDLENLFSPYGRIITSR 152
Query: 209 ---DIFIVRDELKQSRG-----CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
D VR + + G F++F R A AI LNGT +GS + + V+ A+
Sbjct: 153 ILCDNMTVRQFVGNTGGDHSPCVGFIRFDQRIEAERAIQELNGTVP-KGSTESITVKFAN 211
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 79/246 (32%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDK------ 125
K F P+ + I A LYV+ +P+ T++D+ LF +G +I + D
Sbjct: 108 KVSFARPSSEAIKG----ANLYVSGLPKHMTQQDLENLFSPYGRIITSRILCDNMTVRQF 163
Query: 126 --RTGQQQGYC--FVKFTIFEEAGNAIRALNGHYIFPGEQASIKV--------------- 166
TG C F++F EA AI+ LNG + G SI V
Sbjct: 164 VGNTGGDHSPCVGFIRFDQRIEAERAIQELNGT-VPKGSTESITVKFANNPSSNKAVPAL 222
Query: 167 ----------RFADGEREHPVA-------------------------------PPDKL-- 183
RFA G HP P + +
Sbjct: 223 AAYLTPQGARRFAAGPIHHPTGRFSTGKTMLAINKGLQRYSPLAGDLLANSMLPGNSMNG 282
Query: 184 -----YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAA 237
+V L+ +T + + ++F P+G ++ + ++RD + + +G FV ++ + A+ A
Sbjct: 283 SGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVA 342
Query: 238 ISGLNG 243
I LNG
Sbjct: 343 IQSLNG 348
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D +D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRDDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A A+ LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAVNTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|410921400|ref|XP_003974171.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 4-like [Takifugu
rubripes]
Length = 414
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 84 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 143
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 144 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 197
Query: 211 FIVRDELK-------------QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+
Sbjct: 198 RILVDQVTGARVCLXSSGPAGGSRGVGFIRFDKRVEAEEAIKGLNGQ-KPSGAAEPITVK 256
Query: 258 IAD 260
A+
Sbjct: 257 FAN 259
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRGDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 AVKFA 184
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPIAVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
Length = 326
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRGDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARR 206
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 207 FGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 266
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 267 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ T+E++ LF G + L +DK TGQ GY FV + E+A A+ +L
Sbjct: 51 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVTSL 110
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV FA E LYV L+K S+ ++E +F P+G I
Sbjct: 111 NGLRL---QNKTIKVSFARPSSES--IKGANLYVSGLAKTMSQLDLEALFKPFGQIITSR 165
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G FV+F + A AI LNG G +P+ V+ A+
Sbjct: 166 ILSDNVTGISKGVGFVRFDRKSEAEDAIEKLNGKIP-AGCTEPITVKFAN 214
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
++V +P + + LF G V+ V + KD TG+ +GY FV +E+A AI +L
Sbjct: 329 IFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAITSL 388
Query: 152 NG 153
NG
Sbjct: 389 NG 390
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 81 DHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTI 140
D + I +YV + + T++D++ +F E G + V+ KD G+ +G+ FV F
Sbjct: 210 DSTGNKTIFTNVYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGE-GKPKGFGFVNFEN 268
Query: 141 FEEAGNAIRALNGHYI-----FPGE-------QASIKVRFADGEREHPVAPPDK-----L 183
++A A+ +LNG F G + +KV++ +E DK L
Sbjct: 269 ADDAAKAVESLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAA----DKFQSSNL 324
Query: 184 YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
YV L S ++++E+F+PYG + ++RD SRG FV FS E A A+S ++G
Sbjct: 325 YVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSEMSG 384
Query: 244 TFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLG 295
++PL V +A K+ R L+ ++ + PV PP +G
Sbjct: 385 KMI---ENKPLYVAVAQRKEDRRARLQAQFS---------QMRPVAMPPPVG 424
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
LYV + T+ + F + G V+ V + +D T + GY +V FT ++A AI+ L
Sbjct: 42 LYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAIQEL 101
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
N YI P ++V ++ + + +++ L K K + + FS +G+I
Sbjct: 102 N--YI-PLNGKPVRVMYSHRDPSVRRSGAGNIFIKNLDKSIDHKALHDTFSVFGNIISCK 158
Query: 212 IVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ D QS+G FVQ+ E A A+ LNG
Sbjct: 159 VAVDSSGQSKGYGFVQYETEESAQKAMGQLNGML 192
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ E+++ LF G V + KD +TG G+ FV + E+A AI L
Sbjct: 31 LIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTL 90
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +KV FA E LYV L + ++ +I+E+FS YG+I
Sbjct: 91 NGLQV---QNKRLKVSFARPSGEE--IKETNLYVTNLPRNITESQIDEIFSKYGNIVQKN 145
Query: 212 IVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I++D+L RG AFV+F RE A AI+ L+GT GS+ PL V+IA+
Sbjct: 146 ILKDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSE-PLSVKIAE 194
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I ++ LYV +PR TE I +F ++GN+++ + KDK TG +
Sbjct: 101 KVSFARPSGEEIKET----NLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPR 156
Query: 132 GYCFVKFTIFEEAGNAIRALNG 153
G FV+F EEA AI L+G
Sbjct: 157 GVAFVRFDKREEAQEAIARLHG 178
>gi|148232140|ref|NP_001088628.1| ELAV-like protein 1-B [Xenopus laevis]
gi|82232943|sp|Q5U259.1|ELV1B_XENLA RecName: Full=ELAV-like protein 1-B; AltName: Full=Protein ElrA-B;
Short=ElrA
gi|55250533|gb|AAH86269.1| LOC495680 protein [Xenopus laevis]
Length = 326
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 7/187 (3%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G+ D D L V +P+ T++++R LF G V L +DK G GY
Sbjct: 4 GYEDHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGY 63
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
FV + ++A AI LNG + + +IKV FA E LY+ L + +
Sbjct: 64 GFVNYLNAKDAERAINTLNGLRL---QSKTIKVSFARPSSE--TIKDANLYISGLPRTMT 118
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQ 252
+K++E++F P+GHI + ++ D+ SRG AF++F R A AI+ NG GS +
Sbjct: 119 QKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNG-HKPPGSSE 177
Query: 253 PLVVRIA 259
P+ V+ A
Sbjct: 178 PITVKFA 184
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I D A LY++ +PRT T++D+ +F G++I + D+ TG +
Sbjct: 92 KVSFARPSSETIKD----ANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFA 169
G F++F EA AI + NGH PG I V+FA
Sbjct: 148 GVAFIRFDKRSEAEEAIASFNGHKP-PGSSEPITVKFA 184
>gi|291222526|ref|XP_002731265.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like
[Saccoglossus kowalevskii]
Length = 648
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 20/193 (10%)
Query: 75 FNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC 134
++ PAP SG +++V +PR E++I PLFE+ G + ++ L D +G +GY
Sbjct: 164 WDGPAP-----SGDAEQVFVGKIPRDMFEDEIIPLFEKCGKIWDLRLMMDPLSGLNRGYA 218
Query: 135 FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSK 194
FV F E A A++ L+ H I G+ + + A+ +L+VG + K SK
Sbjct: 219 FVTFCDREGAQEAVKQLDNHEIRKGKHLGVCISVAN----------HRLFVGSIPKTKSK 268
Query: 195 KEIEEVFSPY-GHIEDIFIVR--DELKQSRGCAFVQF-SHREMALAAISGLNGTFTMRGS 250
EI E F+ + G + D+ I ++ K++RG AF+ F SH+ +LA ++G + G+
Sbjct: 269 DEILEEFNKHVGGLTDVIIYHMPEDRKKNRGFAFLHFESHKAASLARRRLMSGRIKVWGN 328
Query: 251 DQPLVVRIADPKK 263
+ V ADP++
Sbjct: 329 SN-VTVDWADPQE 340
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEH-GNVIEVV---LPKDKRTGQQQGYCFVKFTIFEEAGN 146
+L+V +P+T ++++I F +H G + +V+ +P+D++ + +G+ F+ F + A
Sbjct: 256 RLFVGSIPKTKSKDEILEEFNKHVGGLTDVIIYHMPEDRK--KNRGFAFLHFESHKAASL 313
Query: 147 AIRALNGHYIFPGEQASIKVRFADGERE---HPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
A R L I +++ V +AD + E +A LYV L+ +++++E F
Sbjct: 314 ARRRLMSGRIKVWGNSNVTVDWADPQEEPDEETMAKVKVLYVRNLTPDAEEEKLKEAFQA 373
Query: 204 YGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
+G +E + ++D FV F R+ A+ A+ LNG
Sbjct: 374 FGTVERVKKLKD-------YCFVHFEERDAAVKAMEELNG 406
>gi|351694381|gb|EHA97299.1| ELAV-like protein 3, partial [Heterocephalus glaber]
Length = 344
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+++ + LF G++ L +DK TGQ GY FV ++ +A AI L
Sbjct: 38 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 97
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K S+KE+E++FS YG I
Sbjct: 98 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITS 151
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGE 268
I+ D++ SRG F++F R A AI GLNG + G+ +P+ A+ +TG+
Sbjct: 152 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPIPGEFANNPSQKTGQ 209
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T +++++ LF ++G +I
Sbjct: 97 LNGLKLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMSQKEMEQLFSQYGRIITSR 152
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGH 154
+ D+ TG +G F++F EA AI+ LNG
Sbjct: 153 ILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 186
>gi|351705755|gb|EHB08674.1| CUG-BP- and ETR-3-like factor 6, partial [Heterocephalus glaber]
Length = 393
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQ 191
G F+ + + A A AL+ PG I+V+ A E KL+VG L KQ
Sbjct: 1 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQ 57
Query: 192 TSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
++++ +F P+GHIE+ ++R S+GCAFV+F + A AAI GL+G+ TM G+
Sbjct: 58 QGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSQTMAGAS 117
Query: 252 QPLVVRIADPKKPRT 266
LVV++AD + R
Sbjct: 118 SSLVVKLADTDRERA 132
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 28 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 86
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI+ L+G G +S+ V+ AD +RE +
Sbjct: 87 KGCAFVKFGSQGEAQAAIQGLHGSQTMAGASSSLVVKLADTDRERAL 133
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 8/190 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRGDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIADPKKP 264
V+ A P
Sbjct: 180 TVKFAANPNP 189
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 33/200 (16%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADG----------EREHPVA--- 178
G F++F EA AI + NGH PG I V+FA R P+
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNPVHHQAQRFRFSPMGVDH 206
Query: 179 ---------PPDK-----LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGC 223
P + +++ L + + + ++F P+G + ++ ++RD + +G
Sbjct: 207 MSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGF 266
Query: 224 AFVQFSHREMALAAISGLNG 243
FV ++ E A AI+ LNG
Sbjct: 267 GFVTMTNYEEAAMAIASLNG 286
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 84 NDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEE 143
N++G L V +P+ TE ++ +F G + + +D +TG G+ FV F +
Sbjct: 84 NNAG--TNLIVNYLPQDLTERELYSMFSTMGPIETCRIMRDVKTGYSYGFGFVNFLSEDA 141
Query: 144 AGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
A AIR LNG+ + +KV +A + + LY+ L + + ++++ +F
Sbjct: 142 AQRAIRCLNGYSV---RNKRLKVSYARPQSDD--IKETNLYITNLPRTITDEQLDIIFGK 196
Query: 204 YGHIEDIFIVRDELKQS-RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
YG I I+RD+L RG AFV+F+ RE A AIS LN +G QPL+VR+A+
Sbjct: 197 YGTIVQKNILRDKLTGFPRGVAFVRFNKREEAQEAISALNNVIP-QGGTQPLIVRVAE 253
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P D I ++ LY+ +PRT T+E + +F ++G +++ + +DK TG +
Sbjct: 160 KVSYARPQSDDIKET----NLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGFPR 215
Query: 132 GYCFVKFTIFEEAGNAIRALN 152
G FV+F EEA AI ALN
Sbjct: 216 GVAFVRFNKREEAQEAISALN 236
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
+H A D D G L V +P+ T++++R LF G V L +DK G GY F
Sbjct: 7 DHMAEDCRGDIG-RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V + ++A AI LNG + + +IKV +A E V LY+ L + ++K
Sbjct: 66 VNYVTAKDAERAINTLNGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQK 120
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++E++FS +G I + ++ D+ SRG AF++F R A AI+ NG GS +P+
Sbjct: 121 DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPI 179
Query: 255 VVRIA 259
V+ A
Sbjct: 180 TVKFA 184
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 92 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY 184
G F++F EA AI + NGH PG I V+FA ++ VA +LY
Sbjct: 148 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLY 200
>gi|324507276|gb|ADY43089.1| RNA-binding motif, single-stranded-interacting protein 1 [Ascaris
suum]
Length = 673
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 8/179 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+Y+ + T+ED+R +++G ++ DK TGQ +GY FV F E A A+ L
Sbjct: 302 VYIRGLDPNTTDEDLRQKCDQYGVILSTKAIMDKATGQCKGYGFVDFESAEAAMRAVEGL 361
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
N + A KV A E++ P LY L +++++++ +G +
Sbjct: 362 NQEGKVQAQMA--KVSIAQQEQD-----PTNLYFANLPANFTEQDLQKTLERFGMVISTR 414
Query: 212 IVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADP-KKPRTGEL 269
I++++ SRG F + +E+ I +NG + S QPL+V+ AD KKP+T L
Sbjct: 415 ILKNQDGASRGVGFARMDKKELCDQIIREMNGKLIINNSTQPLLVKFADSGKKPKTRTL 473
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 89 PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAI 148
P LY A +P TE+D++ E G VI + K++ G +G F + E I
Sbjct: 383 PTNLYFANLPANFTEQDLQKTLERFGMVISTRILKNQD-GASRGVGFARMDKKELCDQII 441
Query: 149 RALNGHYIFPGEQASIKVRFADGERE 174
R +NG I + V+FAD ++
Sbjct: 442 REMNGKLIINNSTQPLLVKFADSGKK 467
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 7/187 (3%)
Query: 74 GFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGY 133
G+ D D L V +P+ T++++R LF G V L +DK G GY
Sbjct: 4 GYEDHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGY 63
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
FV + ++A AI LNG + + +IKV FA E LY+ L + +
Sbjct: 64 GFVNYLNAKDAERAINTLNGLRL---QSKTIKVSFARPSSES--IKDANLYISGLPRTMT 118
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQ 252
+K++E++F P+GHI + ++ D+ SRG AF++F R A AI+ NG GS +
Sbjct: 119 QKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNG-HKPPGSSE 177
Query: 253 PLVVRIA 259
P+ V+ A
Sbjct: 178 PITVKFA 184
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I D A LY++ +PRT T++D+ +F G++I + D+ TG +
Sbjct: 92 KVSFARPSSESIKD----ANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSR 147
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFA 169
G F++F EA AI + NGH PG I V+FA
Sbjct: 148 GVAFIRFDKRSEAEEAIASFNGHKP-PGSSEPITVKFA 184
>gi|45382281|ref|NP_990163.1| RNA-binding protein HuC [Gallus gallus]
gi|5738251|gb|AAD50314.1|AF176674_1 RNA-binding protein HuC [Gallus gallus]
Length = 365
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 111/236 (47%), Gaps = 39/236 (16%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ +++++R LF G++ L +DK TGQ GY FV + +A AI L
Sbjct: 52 LIVNYLPQNMSQDELRSLFGSLGDIESCKLVRDKVTGQSLGYGFVNYVEAGDADKAISTL 111
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK-LYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K +KE+E++FS YG I
Sbjct: 112 NGLKL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKAMGQKEMEQLFSQYGRIITS 165
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD--------- 260
I+ D++ SRG F++F R A A+ GL+G + G+ +P+ V+ A+
Sbjct: 166 RILVDQVTGISRGVGFIRFDKRVEAEEAVRGLHGQKPL-GATEPITVKFANSPGHKAGGA 224
Query: 261 -----------------PKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLGNSAG 299
P++ R L N A+G F P +E V P LG G
Sbjct: 225 LLSLCPGARRYSALQHAPQRFRLDSLL-NVAYGVKRFSPLAIEAV---PALGAGVG 276
>gi|410928271|ref|XP_003977524.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 10/230 (4%)
Query: 44 HRRHYQYDQMSSEPTDFFNGQ-PMPFIGRKRGFNHPAPDHI-NDSGIPAKLYVAPVPRTA 101
H R+ + ++ + +D GQ + K +N+ D + D L V +P++
Sbjct: 7 HIRYLKVCEVQTSQSDVREGQHAIKGAAGKELYNNGFEDQLMEDEDARTNLIVNYLPQSM 66
Query: 102 TEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQ 161
++E++R LF G+V L +DK G GY FV F +A AI LNG + +
Sbjct: 67 SQEELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDAVRAINTLNGLRL---QS 123
Query: 162 ASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-S 220
++KV +A E + LY+ L + S++++E++FS YG I + ++ D+ S
Sbjct: 124 KTLKVSYARPSSE--MIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVS 181
Query: 221 RGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA-DPKKPRTGEL 269
RG AF++F R A AI LNG T GS +P+ V+ A +P + R ++
Sbjct: 182 RGVAFIRFDKRSEAEDAIKHLNG-HTPPGSAEPITVKFATNPNQARGSQV 230
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+++ + + A E + LF G V+ V + +D T + +G+ FV + +EEA AI +L
Sbjct: 278 IFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAIHSL 337
Query: 152 NGHYI 156
NG+ +
Sbjct: 338 NGYRL 342
>gi|403296214|ref|XP_003939012.1| PREDICTED: CUGBP Elav-like family member 5 [Saimiri boliviensis
boliviensis]
Length = 363
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQ 191
G F+ + + A A AL+ PG I+V+ AD E KL+VG L+KQ
Sbjct: 14 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR---GGDRKLFVGMLNKQ 70
Query: 192 TSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
S++++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+
Sbjct: 71 QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 130
Query: 252 QPLVVRIADPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGG 300
LVV+ AD K RT ++ G TPS F ++ + +++G
Sbjct: 131 SSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGS 190
Query: 301 QILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPI 334
+ P V++ P HI Q+ + N ATPI
Sbjct: 191 YLSPGVAFSPCHI-----QQIGAVSLNGLPATPI 219
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +EED+ LF+ G + E + + G +G FVKF+ EA AI A
Sbjct: 61 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPD-GSSKGCAFVKFSSHTEAQAAIHA 119
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
L+G PG +S+ V+FAD ++E + ++ VG L T + FSPY
Sbjct: 120 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGILTPSLTLP--FSPY 170
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ T+E++ LF G + L +DK TGQ GY FV + E+A A+ +L
Sbjct: 87 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYVRQEDAYKAVTSL 146
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV FA E LYV L+K S+ ++E +F P+G I
Sbjct: 147 NGLRL---QNKTIKVSFARPSSES--IKGANLYVSGLAKTMSQLDLEALFKPFGQIITSR 201
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G FV+F + A AI LNG G +P+ V+ A+
Sbjct: 202 ILSDNVTGISKGVGFVRFDRKSEAEDAIDKLNGKIPA-GCTEPITVKFAN 250
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K F P+ + I A LYV+ + +T ++ D+ LF+ G +I + D TG +
Sbjct: 157 KVSFARPSSESIKG----ANLYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTGISK 212
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV+F EA +AI LNG I G I V+FA+
Sbjct: 213 GVGFVRFDRKSEAEDAIDKLNGK-IPAGCTEPITVKFAN 250
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 169 ADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQ 227
+DGE A L + L + +++E+ +FS G I+ +VRD++ QS G FV
Sbjct: 78 SDGE-----AKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVN 132
Query: 228 FSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+ +E A A++ LNG +R ++ + V A P
Sbjct: 133 YVRQEDAYKAVTSLNG---LRLQNKTIKVSFARP 163
>gi|260788580|ref|XP_002589327.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
gi|229274504|gb|EEN45338.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
Length = 336
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
KL+VG +SK+ ++ ++ +F+PYG IE+ ++RD+ QSRGCAFV FS R AL AI L
Sbjct: 27 KLFVGMVSKKCNESDVRIMFAPYGTIEECTVLRDQNGQSRGCAFVTFSTRASALNAIKAL 86
Query: 242 NGTFTMRGSDQPLVVRIADPKKPR 265
+ + TM G PLVV+ AD +K +
Sbjct: 87 HQSQTMEGCSSPLVVKFADTQKDK 110
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V V + E D+R +F +G + E + +D+ GQ +G FV F+ A NAI+A
Sbjct: 27 KLFVGMVSKKCNESDVRIMFAPYGTIEECTVLRDQN-GQSRGCAFVTFSTRASALNAIKA 85
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
L+ G + + V+FAD +++
Sbjct: 86 LHQSQTMEGCSSPLVVKFADTQKD 109
>gi|353232427|emb|CCD79782.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 535
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 102 TEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQ 161
++E++R LF G + L +DK TG+ GY FVK++ EA AI LNG +
Sbjct: 2 SQEEVRVLFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNG---LSLQN 58
Query: 162 ASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQS 220
+IKV A E LY+ L K + E+E++FS YG I I+ D + S
Sbjct: 59 KTIKVSLARPNCESIKGA--NLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGIS 116
Query: 221 RGCAFVQFSHREMALAAISGLNG-----TFTMRGSDQPLVVRIADP 261
RG AF++F+HR A AI LNG ++ ++P+ V+ A+P
Sbjct: 117 RGVAFIRFNHRYEAELAIQQLNGYQLPFEYSNDILNRPITVKFANP 162
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LY++ +P+T + ++ LF ++G +I + D +TG +G F++F EA AI+
Sbjct: 76 ANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEAELAIQ 135
Query: 150 ALNGHYIFPGEQAS------IKVRFAD 170
LNG Y P E ++ I V+FA+
Sbjct: 136 QLNG-YQLPFEYSNDILNRPITVKFAN 161
>gi|294946457|ref|XP_002785076.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
gi|239898488|gb|EER16872.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
Length = 430
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT---GQQQGYCFVKFTIFEEA 144
IP KL+V +P EE++R LF +G+V EV + + K GQ+ G FVK+ +EA
Sbjct: 6 IPVKLFVGKLPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQEA 65
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD------KLYVGCLSKQTSKKEIE 198
AI+ + G +++++A+GE E D KL+V + E++
Sbjct: 66 AAAIQGMAGKQTVNENAGPLQIQYANGEPERLGLADDTEGVAQKLFVANVPADVDDAELK 125
Query: 199 EVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRI 258
VFS YG + + + ++ AFV+FS + L AI LN FT +D+P+ V+
Sbjct: 126 RVFSQYGTVTEAYCIQPRRPGGNRAAFVRFSKKSDGLRAIDALNEKFTFPNNDRPVAVKC 185
Query: 259 ADPKKPR 265
A+ ++ R
Sbjct: 186 AETREQR 192
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 47/302 (15%)
Query: 180 PDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK----QSRGCAFVQFSHREMAL 235
P KL+VG L ++E+ +F PYG +E++ I+R + Q GCAFV++ + A
Sbjct: 7 PVKLFVGKLPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQEAA 66
Query: 236 AAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFGPNFLEPVRPPPNLG 295
AAI G+ G T+ + PL ++ A+ + R G F
Sbjct: 67 AAIQGMAGKQTVNENAGPLQIQYANGEPERLGLADDTEGVAQKLF--------------- 111
Query: 296 NSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPIIQQLHCSQQQSSSQLSQLSLQ 355
V+ P + + +VFS +G A I + + + + S+ S
Sbjct: 112 ----------VANVPADVDDAELKRVFSQYGTVTEAYCIQPRRPGGNRAAFVRFSKKSDG 161
Query: 356 QIQIPRQNSQLS----------QQAVSDMQKQLHLRQSSTQNVEQQQNSHVIVSESESPR 405
I N + + + A + Q+ H + +QQQ S+ ++
Sbjct: 162 LRAIDALNEKFTFPNNDRPVAVKCAETREQRDAHRQDMDVPRSQQQQPSNRFSND----- 216
Query: 406 SGNNPQTSASASTIPTVPQSPQVAASPE--CDWSEHTC-PDGNKYYYNCETCESRWDKPE 462
SG P +++ + P AA P DW+E+ DG YY+N T +++WD P
Sbjct: 217 SGYGPGPTSTGGYGQRITPVPTAAAQPRQAGDWTEYLSQSDGRYYYHNSRTGQTQWDVPY 276
Query: 463 EY 464
E+
Sbjct: 277 EF 278
>gi|432919034|ref|XP_004079712.1| PREDICTED: ELAV-like protein 2-like [Oryzias latipes]
Length = 389
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 129
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 130 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 183
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLN G+ +P+ V+ A+
Sbjct: 184 RILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQ-KPPGATEPITVKFAN 233
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 68/246 (27%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 129 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 184
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP---- 176
+ D+ TG +G F++F EA AI+ LN PG I V+FA+ +
Sbjct: 185 ILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKP-PGATEPITVKFANNPSQKTSQAL 243
Query: 177 ----VAPPDKLYVGCLSKQTSKKEIEEV----------FSP------------------- 203
P++ Y G L++Q + ++ + FSP
Sbjct: 244 LSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMAIDGVTSLAGINIPGHAG 303
Query: 204 -------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAA 237
+G + ++ ++RD + +G FV ++ + A A
Sbjct: 304 TGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVA 363
Query: 238 ISGLNG 243
I+ LNG
Sbjct: 364 IASLNG 369
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 34/228 (14%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
++V + + EE++R +F E G + V + KD+ G+ + + FV F E+A A+ AL
Sbjct: 208 VFVKNLSESTLEEELRKIFGEFGAITSVAVMKDE-DGKSRCFGFVNFENAEDAARAVEAL 266
Query: 152 NGHYI-----FPGE-------QASIKVRFADGEREHPVAPPDK-----LYVGCLSKQTSK 194
NG+ + F G + +K RF +E DK LY+ L S
Sbjct: 267 NGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAV----DKSQGLNLYIKNLDDSISD 322
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++++E+FSPYG I ++RD S+G FV FS+ E A A+S +NG + +PL
Sbjct: 323 EKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVV---SKPL 379
Query: 255 VVRIADPKKPRTGELRGNYAFGTP-----SFGPNFLEPVRPP--PNLG 295
V +A K+ R L+ ++ P S P P+ PP P LG
Sbjct: 380 YVALAQRKEERRARLQAQFSQMRPIAMASSVAPRM--PMYPPGGPGLG 425
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
LYV + T+ + LF + G V+ V + +D + + GY +V + ++A A+ L
Sbjct: 29 LYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEVL 88
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
N P I++ +++ + + +++ L K K + + FS +G+I
Sbjct: 89 N---FTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 145
Query: 212 IVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ D QS+G FVQ+ E A AI LNG
Sbjct: 146 VAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGML 179
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 34/228 (14%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+YV + T TEED++ F E+G + V+ +D G+ + + FV F ++A A+ AL
Sbjct: 205 VYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDG-DGKTKCFGFVNFENADDAATAVEAL 263
Query: 152 NGHYI-----FPGE-------QASIKVRFADGEREHPVAPPDK-----LYVGCLSKQTSK 194
NG F G+ + +KVRF +E DK LY+ L
Sbjct: 264 NGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAA----DKFQGANLYIKNLDDSIGD 319
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
++++FSP+G I ++RD SRG FV FS E A A+ +NG + +PL
Sbjct: 320 DRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMNGKMVV---SKPL 376
Query: 255 VVRIADPKKPRTGELRGNYA-----FGTPSFGPNFLEPVRPP--PNLG 295
V +A K+ R L+ ++ PS P P+ PP P LG
Sbjct: 377 YVALAQRKEDRRARLQAQFSQIRPVAMAPSVAPRM--PMYPPGGPGLG 422
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 17/234 (7%)
Query: 39 NYHSHHRRHYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVP 98
NY S D ++ P NG P+ + ++H P + SG +++ +
Sbjct: 71 NYSSPQDAARALDMLNFTP---LNGSPIRIM-----YSHRDP-SVRKSG-SGNIFIKNLD 120
Query: 99 RTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFP 158
+ + + F GN++ + D +GQ +GY FV+F E A AI LNG +
Sbjct: 121 KGIDHKALHDTFSAFGNILSCKVATDS-SGQSKGYGFVQFDNEESAQKAIEKLNGM-LLN 178
Query: 159 GEQASIKVRFADGEREHPVAPP--DKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE 216
+Q + ERE + + +YV LS+ T+++++++ F YG I ++RD
Sbjct: 179 DKQVYVGPFLRKQERESAIDKTRFNNVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDG 238
Query: 217 LKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELR 270
+++ FV F + + A A+ LNG + D+ V A K R EL+
Sbjct: 239 DGKTKCFGFVNFENADDAATAVEALNGK---KFDDKEWFVGKAQKKNERENELK 289
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 88 IPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNA 147
+ LYV + T+ + LF + G V+ V + +D T + GY +V ++ ++A A
Sbjct: 22 VTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARA 81
Query: 148 IRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHI 207
+ LN P + I++ ++ + + +++ L K K + + FS +G+I
Sbjct: 82 LDMLN---FTPLNGSPIRIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNI 138
Query: 208 EDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ D QS+G FVQF + E A AI LNG
Sbjct: 139 LSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGML 176
>gi|348583729|ref|XP_003477625.1| PREDICTED: CUGBP Elav-like family member 6-like [Cavia porcellus]
Length = 472
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 134 CFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTS 193
F+ + + A A AL+ PG I+V+ A E KL+VG L KQ
Sbjct: 82 AFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR---GEDRKLFVGMLGKQQG 138
Query: 194 KKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
++++ +F P+GHIE+ ++R S+GCAFV+F + A AAI GL+G+ TM G+
Sbjct: 139 EEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSS 198
Query: 254 LVVRIADPKKPRT 266
LVV++AD + R
Sbjct: 199 LVVKLADTDRERA 211
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 74 GFNHP---APDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQ 130
G N P P G KL+V + + EED+R LF+ G++ E + + G
Sbjct: 107 GMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTS 165
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPV 177
+G FVKF EA AI+ L+G G +S+ V+ AD +RE +
Sbjct: 166 KGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERAL 212
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ T+E++ LF G + L +DK TGQ GY FV + E+A A+ +L
Sbjct: 51 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYVRQEDAYKAVTSL 110
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV FA E LYV L+K S+ ++E +F P+G I
Sbjct: 111 NGLRL---QNKTIKVSFARPSSES--IKGANLYVSGLAKTMSQLDLEALFKPFGQIITSR 165
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G FV+F + A AI LNG G +P+ V+ A+
Sbjct: 166 ILSDNVTGISKGVGFVRFDRKSEAEDAIDKLNGKIP-AGCTEPITVKFAN 214
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 39 NYHSHHRRHYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVP 98
+ ++ R+ Y ++S NG + K F P+ + I A LYV+ +
Sbjct: 93 GFVNYVRQEDAYKAVTS-----LNGLRLQNKTIKVSFARPSSESIKG----ANLYVSGLA 143
Query: 99 RTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFP 158
+T ++ D+ LF+ G +I + D TG +G FV+F EA +AI LNG I
Sbjct: 144 KTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAEDAIDKLNGK-IPA 202
Query: 159 GEQASIKVRFAD 170
G I V+FA+
Sbjct: 203 GCTEPITVKFAN 214
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 169 ADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQ 227
+DGE A L + L + +++E+ +FS G I+ +VRD++ QS G FV
Sbjct: 42 SDGE-----AKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVN 96
Query: 228 FSHREMALAAISGLNGTFTMRGSDQPLVVRIADP 261
+ +E A A++ LNG +R ++ + V A P
Sbjct: 97 YVRQEDAYKAVTSLNG---LRLQNKTIKVSFARP 127
>gi|348525751|ref|XP_003450385.1| PREDICTED: ELAV-like protein 2-like [Oreochromis niloticus]
Length = 440
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+++ LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 121 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 180
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 181 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 234
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D++ SRG F++F R A AI GLN G+ +P+ V+ A+
Sbjct: 235 RILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQ-KPPGATEPITVKFAN 284
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 68/246 (27%)
Query: 61 FNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVV 120
NG + K + P+ I D A LYV+ +P+T T++++ LF ++G +I
Sbjct: 180 LNGLRLQTKTIKVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSR 235
Query: 121 LPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP---- 176
+ D+ TG +G F++F EA AI+ LN PG I V+FA+ +
Sbjct: 236 ILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKP-PGATEPITVKFANNPSQKTSQAL 294
Query: 177 ----VAPPDKLYVGCLSKQTSKKEIEEV----------FSP------------------- 203
P++ Y G L++Q + ++ + FSP
Sbjct: 295 LSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMAIDGVTSLAGINIPGHAG 354
Query: 204 -------------------------YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAA 237
+G + ++ ++RD + +G FV ++ + A A
Sbjct: 355 TGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVA 414
Query: 238 ISGLNG 243
I+ LNG
Sbjct: 415 IASLNG 420
>gi|157119097|ref|XP_001659335.1| RNA-binding protein, putative [Aedes aegypti]
gi|108875486|gb|EAT39711.1| AAEL008516-PA, partial [Aedes aegypti]
Length = 359
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT-----------------GQQQGYC 134
L V +P+ T+E+IR LF G V L +DK T GQ GY
Sbjct: 30 LIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTENALIHTFLLRFQISHSGQSLGYG 89
Query: 135 FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSK 194
FV + E+A AI LNG + + IKV FA E LYV L K +
Sbjct: 90 FVNYQRVEDASKAINTLNGLRL---QNKQIKVSFARPSSE--AIKGANLYVSGLPKNMLQ 144
Query: 195 KEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
++E +FSPYG I I+ D + S+G F++F R A AI LNGT +GS +P
Sbjct: 145 ADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKELNGTIP-KGSTEP 203
Query: 254 LVVRIA-DPKKPRT 266
+ V+ A +P +T
Sbjct: 204 ITVKFANNPSNTKT 217
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 61/253 (24%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+YQ + +S+ + NG + K F P+ + I A LYV+ +P+ + D+
Sbjct: 92 NYQRVEDASKAINTLNGLRLQNKQIKVSFARPSSEAIKG----ANLYVSGLPKNMLQADL 147
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKV 166
LF +G +I + D TG +G F++F EA AI+ LNG I G I V
Sbjct: 148 ESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKELNGT-IPKGSTEPITV 206
Query: 167 RFADGEREHPVAPPDKLYVG---------------------------------------- 186
+FA+ PP Y+G
Sbjct: 207 KFANNPSNTKTVPPLAAYLGPQAARRFPGPIHHPTGRFSAIPNYRYSPLAGDLLANTMIP 266
Query: 187 ----------CLSKQTSKKEIEE-----VFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSH 230
C+ E EE +F P+G ++ + +++D + + +G FV ++
Sbjct: 267 TNAIANGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTN 326
Query: 231 REMALAAISGLNG 243
+ A+ AI LNG
Sbjct: 327 YDEAVVAIQSLNG 339
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+YV + TE D++ +F E+G + V+ +D G+ +G+ FV F E+A A+ AL
Sbjct: 205 VYVKNLFEATTEADLKSIFGEYGAITSAVVMRDV-DGKSKGFGFVNFANVEDAAKAVEAL 263
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDK--------------LYVGCLSKQTSKKEI 197
NG F G++ + ERE + ++ LY+ L +E+
Sbjct: 264 NGKN-FDGKEWYVGKAQKKSERELELKERNEQSTKETVDKYHGTNLYIKNLDDSVGDEEL 322
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVR 257
E+FS +G I ++RD SRG FV FS E A A+ +NG + +PL V
Sbjct: 323 RELFSEFGTITSCKVMRDPSGISRGSGFVAFSIAEGASWALGEMNGKMV---AGKPLYVA 379
Query: 258 IADPKKPRTGELRGNYAFGTP-SFGPNFLEPVRPPPNLGNSAGGQIL 303
+A K+ R L+ ++ P + PN + P P LG GQ L
Sbjct: 380 LAQRKEDRRARLQAQFSQARPVAITPN-VSPRMPLYPLGAPGIGQQL 425
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 3/170 (1%)
Query: 76 NHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCF 135
N A N S LYV + + + LF + V+ V + +D T Q GY +
Sbjct: 10 NDAAASGANPSMTTISLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGY 69
Query: 136 VKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKK 195
V F+ +A AI LN P +I++ ++ + + +++ L K K
Sbjct: 70 VNFSNARDAAKAIDVLN---FTPLNGKTIRIMYSIRDPSARKSGAANVFIKNLDKAIDHK 126
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ + FS +G+I I D QS+G FVQF E A AI LNG
Sbjct: 127 ALFDTFSAFGNILSCKIATDASGQSKGHGFVQFESEESAQNAIDKLNGML 176
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A +++ + + + + F GN++ + D +GQ +G+ FV+F E A NAI
Sbjct: 112 ANVFIKNLDKAIDHKALFDTFSAFGNILSCKIATDA-SGQSKGHGFVQFESEESAQNAID 170
Query: 150 ALNGHYIFPGEQASIKVRFADGEREHPVAPP--DKLYVGCLSKQTSKKEIEEVFSPYGHI 207
LNG I +Q + +RE ++ + +YV L + T++ +++ +F YG I
Sbjct: 171 KLNGMLI-NDKQVYVGPFQRKQDRESALSGTKFNNVYVKNLFEATTEADLKSIFGEYGAI 229
Query: 208 EDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNG 243
++RD +S+G FV F++ E A A+ LNG
Sbjct: 230 TSAVVMRDVDGKSKGFGFVNFANVEDAAKAVEALNG 265
>gi|354488715|ref|XP_003506512.1| PREDICTED: CUGBP Elav-like family member 5-like [Cricetulus
griseus]
Length = 569
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 21/225 (9%)
Query: 124 DKRTGQQQGYCFVKFTIFEEAGNAIRA---LNGHYIFPGEQASIKVRFADGEREHPVAPP 180
D G + +C F + +AI+A L+ PG I+V+ AD E
Sbjct: 161 DWLGGLKAHFCCCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRD 218
Query: 181 DKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISG 240
KL+VG L+KQ S++++ +F P+G I++ ++R S+GCAFV+FS A AAI
Sbjct: 219 RKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 278
Query: 241 LNGTFTMRGSDQPLVVRIADPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVR 289
L+G+ TM G+ LVV+ AD + RT ++ G TPS F ++
Sbjct: 279 LHGSQTMPGASSSLVVKFADTDRERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQ 338
Query: 290 PPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPI 334
+ +++G + P V++ P HI Q+ + N ATPI
Sbjct: 339 QQTTVLSTSGSYLSPGVAFPPCHI-----QQIGAVSLNGLPATPI 378
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 24 YCSWSSDDHRHNFPDNYHSHHRRHYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHI 83
+C W H + ++ R D T + +P G R D
Sbjct: 159 FCDWLGGLKAHFCCCAFLTYCAR----DSAIKAQTALHEQKTLP--GMARPIQVKPADSE 212
Query: 84 NDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEE 143
+ G KL+V + + +EED+ LF+ G + E + + G +G FVKF+ E
Sbjct: 213 SRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGP-DGSSKGCAFVKFSSHTE 271
Query: 144 AGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSP 203
A AI AL+G PG +S+ V+FAD +RE + ++ VG L T + FSP
Sbjct: 272 AQAAIHALHGSQTMPGASSSLVVKFADTDRERTLRRMQQM-VGQLGILTPSLTLP--FSP 328
Query: 204 Y 204
Y
Sbjct: 329 Y 329
>gi|444509480|gb|ELV09276.1| CUGBP Elav-like family member 5, partial [Tupaia chinensis]
Length = 329
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQ 191
G F+ + + A A AL+ PG I+V+ AD E KL+VG L+KQ
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESR---GGDRKLFVGMLNKQ 57
Query: 192 TSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
S++++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+
Sbjct: 58 QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 117
Query: 252 QPLVVRIADPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGG 300
LVV+ AD K RT ++ G TPS F ++ + +++G
Sbjct: 118 SSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPCSAYAQALMQQQTTVLSTSGS 177
Query: 301 QILPNVSYRPQHIFNNSHPQVFSNWGNQEAATPI 334
+ P V++ P HI Q+ + N ATPI
Sbjct: 178 YLSPGVAFSPCHI-----QQIGAVSLNGLPATPI 206
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +EED+ LF+ G + E + + G +G FVKF+ EA AI A
Sbjct: 48 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPD-GSSKGCAFVKFSSHTEAQAAIHA 106
Query: 151 LNGHYIFPGEQASIKVRFADGERE 174
L+G PG +S+ V+FAD ++E
Sbjct: 107 LHGSQTMPGASSSLVVKFADTDKE 130
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT-------GQQQGYCFVKFTIFEEA 144
L V +P+T TEE+IR LF G V V L +DK GQ GY FV + ++A
Sbjct: 76 LIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNYHRPQDA 135
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
A+ LNG + + +KV FA E LY+ L K +++E+E +F PY
Sbjct: 136 EQAVNVLNGLRL---QNKVLKVSFARPSSEG--IKGANLYISGLPKTITQEELETIFRPY 190
Query: 205 GH-IEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
G I +++D + +G F++F R+ A AI LNGT T +G P+ V+ ++
Sbjct: 191 GEIITSRVLIQDGNDKPKGVGFIRFDQRKEAERAIQALNGT-TPKGLTDPITVKFSN 246
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 62/255 (24%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+Y Q + + + NG + K F P+ + I A LY++ +P+T T+E++
Sbjct: 128 NYHRPQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKG----ANLYISGLPKTITQEEL 183
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNG------------- 153
+F +G +I + + +G F++F +EA AI+ALNG
Sbjct: 184 ETIFRPYGEIITSRVLIQDGNDKPKGVGFIRFDQRKEAERAIQALNGTTPKGLTDPITVK 243
Query: 154 HYIFPGEQASIKV-----------------------------RFA--DGE---REHPVAP 179
PG+ A+ KV RF+ GE P AP
Sbjct: 244 FSNTPGQNAAAKVVQPALPAFLNPQLTRRLGAIHHPINKGLARFSPMGGEVLDMMLPAAP 303
Query: 180 PDKL----------YVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQF 228
+ L ++ L+ +T + + ++F P+G ++++ +++D Q +G FV
Sbjct: 304 ANGLNVAPSGGWSIFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDAATNQCKGYGFVTM 363
Query: 229 SHREMALAAISGLNG 243
++ E A+ AI LNG
Sbjct: 364 TNYEEAMLAIRSLNG 378
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 102 TEED-IRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYI 156
TEE+ + LF G V V + KD T Q +GY FV T +EEA AIR+LNG+ +
Sbjct: 326 TEENTLWQLFGPFGAVQNVKVIKDAATNQCKGYGFVTMTNYEEAMLAIRSLNGYTL 381
>gi|294868388|ref|XP_002765513.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239865556|gb|EEQ98230.1| CUG triplet repeat RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 403
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 85 DSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEA 144
+S I YV PV +D R +G + EV + KD+ T + +G FV+F E
Sbjct: 15 ESQIVGSPYVQPVTYLNGPDDDR---ARYGGIEEVFIMKDRETQESRGLAFVRFRDLAEG 71
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD---------KLYVGCLSKQTSKK 195
NAI ALNG I P + V +A GE E + KLYV L T
Sbjct: 72 QNAIAALNGA-ILPESARPLTVIYAQGEAERLGLTKETPGMRSEETKLYVAGLGPSTEAV 130
Query: 196 EIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLV 255
E+ ++F P+G + ++ + AFV+F+ + A+ AIS +NG + GS + L
Sbjct: 131 ELRKIFEPFGRVTEVHVPGPHAL----YAFVRFAEEKDAMRAISDVNGRVQVEGSQRMLE 186
Query: 256 VRIADPKKPR------TGELRGNYAFGTPS 279
V++ADP R +G L ++G+P+
Sbjct: 187 VKVADPSSSRGPTRRPSGSLPPVSSYGSPA 216
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 75 FNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC 134
F +P+ H A +++ VP TE D+R F GN++ + DK+TG +GY
Sbjct: 292 FKNPSAAHTGSGPAGANIFIFSVPDAWTEMDLRQHFGSFGNIVSAKVVVDKQTGISRGYG 351
Query: 135 FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPP 180
F+ + + A A++ ++G+ G + IKV+ GE + A P
Sbjct: 352 FISYDNCDSAERAVQTMDGYMAPTGRK--IKVQIKKGEGSNNDASP 395
>gi|32364115|gb|AAP80208.1| FCA-like protein [Triticum aestivum]
Length = 443
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 62/103 (60%), Gaps = 10/103 (9%)
Query: 223 CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFG- 281
C FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADPK+PR GE RG AFG P
Sbjct: 1 CGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPRPGESRGGPAFGGPGVSS 60
Query: 282 -PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ-------HIFNN 316
+ +RP NL G + P+ S+RP H FNN
Sbjct: 61 RSDAALVIRPTANLDEQIGRHVPPD-SWRPSSPSPMAPHQFNN 102
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 330 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 387
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 388 EKPEEYILYEQQ-QQHQKL 405
>gi|351694709|gb|EHA97627.1| CUG-BP- and ETR-3-like factor 5, partial [Heterocephalus glaber]
Length = 300
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQ 191
G F+ + + A A AL+ PG I+V+ AD E KL+VG L+KQ
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQ 58
Query: 192 TSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSD 251
S++++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+
Sbjct: 59 QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 118
Query: 252 QPLVVRIADPKKPRT----GELRGNYAFGTPSFGPNF 284
LVV+ AD K RT ++ G TPS F
Sbjct: 119 SSLVVKFADTDKERTLRRMQQMVGQLGILTPSLALPF 155
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +EED+ LF+ G + E + + G +G FVKF+ EA AI A
Sbjct: 49 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPD-GSSKGCAFVKFSSHTEAQAAIHA 107
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
L+G PG +S+ V+FAD ++E + ++ VG L T + FSPY
Sbjct: 108 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGILTPSLALP--FSPY 158
>gi|321475411|gb|EFX86374.1| hypothetical protein DAPPUDRAFT_98025 [Daphnia pulex]
Length = 335
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 102 TEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQ 161
T+E+IR LF G V L +DK TGQ GY FV + E+A AI LNG + +
Sbjct: 2 TQEEIRSLFASIGEVESCKLIRDKITGQSLGYGFVNYHRAEDAEKAINTLNGLRL---QN 58
Query: 162 ASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-- 219
+IKV FA E+ LYV + K + E+E +F+P+G I I+ D +
Sbjct: 59 KTIKVSFARPSSEN--IKGANLYVSGIPKTMCQSELETLFAPFGRIITSRILCDSITAGL 116
Query: 220 SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
S+G F++F R A AI LNGT +G+ +P+ V+ A+
Sbjct: 117 SKGVGFIRFDTRGEAERAIEKLNGTVP-QGATEPITVKFAN 156
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT-GQQ 130
K F P+ ++I A LYV+ +P+T + ++ LF G +I + D T G
Sbjct: 62 KVSFARPSSENIKG----ANLYVSGIPKTMCQSELETLFAPFGRIITSRILCDSITAGLS 117
Query: 131 QGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
+G F++F EA AI LNG + G I V+FA+
Sbjct: 118 KGVGFIRFDTRGEAERAIEKLNGT-VPQGATEPITVKFAN 156
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 183 LYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGL 241
++V L+ T + + ++F P+G ++ + ++RD + + +G FV ++ + AL AI L
Sbjct: 249 IFVYNLAPDTEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEALVAIQSL 308
Query: 242 NG 243
NG
Sbjct: 309 NG 310
>gi|13096196|pdb|1FXL|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The C-Fos
Rna
gi|13096204|pdb|1G2E|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The Tumor
Necrosis Factor Alpha Rna
Length = 167
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E+ R LF G + L +DK TGQ GY FV + ++A AI L
Sbjct: 5 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 64
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG + + +IKV +A R + D LYV L K ++KE+E++FS YG I
Sbjct: 65 NGLRL---QTKTIKVSYA---RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITS 118
Query: 211 FIVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
I+ D++ SRG F++F R A AI GLNG G+ +P+ V+ A
Sbjct: 119 RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFA 167
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ I D A LYV+ +P+T T++++ LF ++G +I + D+ TG +
Sbjct: 75 KVSYARPSSASIRD----ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 130
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFA 169
G F++F EA AI+ LNG G I V+FA
Sbjct: 131 GVGFIRFDKRIEAEEAIKGLNGQKP-SGATEPITVKFA 167
>gi|256075727|ref|XP_002574168.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 517
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 102 TEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQ 161
++E++R LF G + L +DK TG+ GY FVK++ EA AI LNG +
Sbjct: 2 SQEEVRVLFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNG---LSLQN 58
Query: 162 ASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRD-ELKQS 220
+IKV A E LY+ L K + E+E++FS YG I I+ D + S
Sbjct: 59 KTIKVSLARPNCESIKGA--NLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGIS 116
Query: 221 RGCAFVQFSHREMALAAISGLNG-----TFTMRGSDQPLVVRIADP 261
RG AF++F+HR A AI LNG ++ ++P+ V+ A+P
Sbjct: 117 RGVAFIRFNHRYEAELAIQQLNGYQLPFEYSNDILNRPITVKFANP 162
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A LY++ +P+T + ++ LF ++G +I + D +TG +G F++F EA AI+
Sbjct: 76 ANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEAELAIQ 135
Query: 150 ALNGHYIFPGEQAS------IKVRFAD 170
LNG Y P E ++ I V+FA+
Sbjct: 136 QLNG-YQLPFEYSNDILNRPITVKFAN 161
>gi|157114005|ref|XP_001657938.1| RNA-binding protein, putative [Aedes aegypti]
gi|108877490|gb|EAT41715.1| AAEL006675-PA, partial [Aedes aegypti]
Length = 359
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRT-----------------GQQQGYC 134
L V +P+ T+E+IR LF G V L +DK T GQ GY
Sbjct: 30 LIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGESLMYTFLLRFQIFHSGQSLGYG 89
Query: 135 FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSK 194
FV + E+A AI LNG + + IKV FA E LYV L K +
Sbjct: 90 FVNYQRVEDASKAINTLNGLRL---QNKQIKVSFARPSSE--AIKGANLYVSGLPKNMLQ 144
Query: 195 KEIEEVFSPYGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQP 253
++E +FSPYG I I+ D + S+G F++F R A AI LNGT +GS +P
Sbjct: 145 ADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKELNGTIP-KGSTEP 203
Query: 254 LVVRIA-DPKKPRT 266
+ V+ A +P +T
Sbjct: 204 ITVKFANNPSNTKT 217
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 61/253 (24%)
Query: 47 HYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDI 106
+YQ + +S+ + NG + K F P+ + I A LYV+ +P+ + D+
Sbjct: 92 NYQRVEDASKAINTLNGLRLQNKQIKVSFARPSSEAIKG----ANLYVSGLPKNMLQADL 147
Query: 107 RPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKV 166
LF +G +I + D TG +G F++F EA AI+ LNG I G I V
Sbjct: 148 ESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKELNGT-IPKGSTEPITV 206
Query: 167 RFADGEREHPVAPPDKLYVG---------------------------------------- 186
+FA+ PP Y+G
Sbjct: 207 KFANNPSNTKTVPPLAAYLGPQAARRFPGPIHHPTGRFSAIPNYRYSPLAGDLLANTMIP 266
Query: 187 ----------CLSKQTSKKEIEE-----VFSPYGHIEDIFIVRD-ELKQSRGCAFVQFSH 230
C+ E EE +F P+G ++ + +++D + + +G FV ++
Sbjct: 267 TNAIANGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTN 326
Query: 231 REMALAAISGLNG 243
+ A+ AI LNG
Sbjct: 327 YDEAVVAIQSLNG 339
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ T+E++ LF G + L +DK TGQ GY FV + E+A A+ +L
Sbjct: 20 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVTSL 79
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV FA E LYV L+K S+ ++E +F P+G I
Sbjct: 80 NGLRL---QNKTIKVSFARPSSES--IKGANLYVSGLAKTMSQLDLEALFKPFGQIITSR 134
Query: 212 IVRDELKQ-SRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+ D + S+G FV+F + A AI LNG G +P+ V+ A+
Sbjct: 135 ILSDNVTGISKGVGFVRFDRKSEAEDAIEKLNGKIP-AGCTEPITVKFAN 183
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
++V +P + + LF G V+ V + KD TG+ +GY FV +E+A AI +L
Sbjct: 298 IFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAITSL 357
Query: 152 NG 153
NG
Sbjct: 358 NG 359
>gi|195469719|ref|XP_002099784.1| GE16683 [Drosophila yakuba]
gi|194187308|gb|EDX00892.1| GE16683 [Drosophila yakuba]
Length = 563
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ T+ ++ LF G + + +D +TG GY FV + ++ +AI+ L
Sbjct: 115 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKL 174
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG Y+ +KV +A R + D LYV LS+ + ++ +FSPYG I
Sbjct: 175 NGFYV---RNKRLKVSYA---RPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQR 228
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L + RG AFV+++ RE A AI LN T GS QP+ VR+A+
Sbjct: 229 NILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGS-QPIWVRLAE 278
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P I D+ LYV + R ++ + +F +G +++ + +DK TG+ +
Sbjct: 185 KVSYARPGGQSIKDT----NLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPR 240
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV++ EEA AI+ALN + + G I VR A+
Sbjct: 241 GVAFVRYNKREEAQEAIKALN-NTVPEGGSQPIWVRLAE 278
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 30/223 (13%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+YV + + TEE +R +FE+ G + VV+ KD G+ +G+ FV + E AG ++ L
Sbjct: 211 VYVKNLHESVTEEKLREVFEKFGALTSVVVMKDAE-GKSKGFGFVCYEDAEAAGKSVEEL 269
Query: 152 NGHYIFPGE-------------QASIKVRFADGEREHPV--APPDKLYVGCLSKQTSKKE 196
+G+ + +A +K +F D ER + LY+ L +
Sbjct: 270 DGYDKIEDKAWVVCRAQKKSEREAELKAKF-DAERRERMEKMAGANLYIKNLEDTVDDAK 328
Query: 197 IEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVV 256
+ E+F+ +G I ++RD SRG AFV FS + A A++ +NG +PL V
Sbjct: 329 LRELFAEFGTITSCRVMRDTAGASRGSAFVAFSSADEATRAVTEMNGKMA---GQKPLYV 385
Query: 257 RIADPKKPRTGELRGNY------AFGTPSFGPNFLEPVRPPPN 293
+A K+ R L+ + A G P+ GP + PPP
Sbjct: 386 ALAQRKEDRRLRLQAQFAQRQVAAGGMPNMGPYGM----PPPG 424
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 62 NGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVL 121
NG+P+ + +R PA + SG+ +++ + + + + F + GN++ +
Sbjct: 99 NGKPIRIMYSQR---DPA---LRKSGV-GNIFIKNLDKEIDNKALYDTFAQFGNIVSAKV 151
Query: 122 PKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD 181
D + GQ +GY FV+F E A +AI +NG + +Q + ER +
Sbjct: 152 ATDLQ-GQSKGYGFVQFDTEEGAQSAIEKVNGM-LLNDKQVYVGPFQKRNERGGGPTTFN 209
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGL 241
+YV L + +++++ EVF +G + + +++D +S+G FV + E A ++ L
Sbjct: 210 NVYVKNLHESVTEEKLREVFEKFGALTSVVVMKDAEGKSKGFGFVCYEDAEAAGKSVEEL 269
Query: 242 NGTFTMRGSDQPLVVRIADPKKPRTGELRGNY 273
+G + D+ VV A K R EL+ +
Sbjct: 270 DGYDKI--EDKAWVVCRAQKKSEREAELKAKF 299
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
LY + + TE + LF G V+ + + +D T + GY +V F +A AI AL
Sbjct: 34 LYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDAL 93
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
N + I++ ++ + + +++ L K+ K + + F+ +G+I
Sbjct: 94 NFQVV---NGKPIRIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFAQFGNIVSAK 150
Query: 212 IVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
+ D QS+G FVQF E A +AI +NG
Sbjct: 151 VATDLQGQSKGYGFVQFDTEEGAQSAIEKVNGML 184
>gi|328876996|gb|EGG25359.1| hypothetical protein DFA_03608 [Dictyostelium fasciculatum]
Length = 1145
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 18/183 (9%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNV--IEVV---------LPKDKRTGQQQGYCFVKFTI 140
L V +P+ T ED++ LFEE G + +VV LP+ GY FVKF
Sbjct: 706 LIVHNIPKHFTNEDLKDLFEEFGEIESYKVVANRKAPSTLLPQQPPPQANMGYGFVKFVH 765
Query: 141 FEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEV 200
E A AI ++NGH + +IKV +A + LY+ L +K+++ E
Sbjct: 766 SESAAAAIESMNGHMT---DSKTIKVSYATPTSQQSTHA--NLYINRLEPHVTKEDLAEA 820
Query: 201 FSPYGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
FS +G + + I+ D SR FV FS+R ALAA+S +NG + P+ V+ A
Sbjct: 821 FSKFGELVETRILMDLNTNTSRCVGFVHFSNRRDALAALSAMNGA-NISQQSTPIYVKFA 879
Query: 260 DPK 262
D K
Sbjct: 880 DQK 882
>gi|45553910|ref|NP_996326.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|25012235|gb|AAN71232.1| LD21345p [Drosophila melanogaster]
gi|27819751|gb|AAO24926.1| SD07604p [Drosophila melanogaster]
gi|45446770|gb|AAS65244.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|220951726|gb|ACL88406.1| CG3056-PB [synthetic construct]
Length = 443
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 85 DSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEA 144
D L + +P+ T+ ++ LF G + + +D +TG GY FV + ++
Sbjct: 88 DRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDS 147
Query: 145 GNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSP 203
+AI+ LNG Y+ +KV +A R + D LYV LS+ + ++ +FSP
Sbjct: 148 EDAIQKLNGFYV---RNKRLKVSYA---RPGGQSIKDTNLYVINLSRNINDDMLDRIFSP 201
Query: 204 YGHIEDIFIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
YG I I+RD+L + RG AFV+++ RE A AI LN T GS QP+ VR+A+
Sbjct: 202 YGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGS-QPIWVRLAE 258
>gi|299472576|emb|CBN78228.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 583
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 123 KDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGE---------- 172
+D++T +G F+ + E A+ + P ++VR AD +
Sbjct: 4 RDRQTDAHRGCAFLTYQTREAGERAVDKFHNKVKLPNAHNPVQVRPADSQMGDDRLGPNG 63
Query: 173 REHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHRE 232
R PV +KL+VG L + EVFS +G I +I+ +R+ +GCAFV+FS R
Sbjct: 64 RVAPVDRENKLFVGMLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFSTRS 123
Query: 233 MALAAISGLNGTFTMRGSDQPLVVRIADPKKPRT 266
A+AAI L+ TM G+ + LVV+ AD KK +T
Sbjct: 124 AAIAAIEALHEKCTMDGATRALVVKFADVKKAQT 157
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 90 AKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIR 149
A L++ +P T+ D+ F G+V+ + DKRT + +G+ FV + EA AI
Sbjct: 325 ANLFIYHLPNDLTDADLATAFAPFGHVVSAKVFLDKRTQESKGFGFVSYNHPAEAEVAIS 384
Query: 150 ALNGHYIFPGEQASIKVRFAD-GEREH 175
+NG I ++ ++ + AD G+REH
Sbjct: 385 KMNGFQIG-SKRLKVQHKKADHGDREH 410
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 171 GEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFS 229
G R P L++ L + ++ F+P+GH+ + D+ Q S+G FV ++
Sbjct: 315 GARPQEGPPGANLFIYHLPNDLTDADLATAFAPFGHVVSAKVFLDKRTQESKGFGFVSYN 374
Query: 230 HREMALAAISGLNG 243
H A AIS +NG
Sbjct: 375 HPAEAEVAISKMNG 388
>gi|151936113|gb|ABS18833.1| ELAV-type RNA binding protein variant B [Caenorhabditis elegans]
Length = 193
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
Query: 78 PAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVK 137
P+P + I K++V +PR E D R LFE++G+V + +DK T +G CFV
Sbjct: 45 PSPSEPDTDAI--KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Query: 138 FTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEI 197
F ++A A AL+ + G ++++ AD E + KL++G LSK+ +++ +
Sbjct: 103 FYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRN----ERKLFIGQLSKKHNEENL 158
Query: 198 EEVFSPYGHIEDIFIVRDELKQSRG 222
E+F+ +GHIED ++RD+ +SRG
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRG 183
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 182 KLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDELKQ-SRGCAFVQFSHREMALAAISG 240
K++VG + +Q ++ + +F YG + I+RD+ Q S+GC FV F HR+ A+ A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 241 LNGTFTMRGSDQPLVVRIAD 260
L+ + G P+ ++ AD
Sbjct: 116 LHNIKVIEGMHHPVQMKPAD 135
>gi|32364121|gb|AAP80211.1| FCA-like protein [Triticum aestivum]
Length = 444
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 223 CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFG- 281
C FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADPK+PR GE RG AFG P
Sbjct: 1 CGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPRPGESRGGPAFGGPGVSS 60
Query: 282 -PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ-------HIFNNSHP 319
+ +RP NL G + P+ S+RP H FNN P
Sbjct: 61 RSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMAPHQFNNFGP 105
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 331 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 388
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+K EEY+L+EQQ + QKL
Sbjct: 389 EKLEEYILYEQQ-QHHQKL 406
>gi|3255957|emb|CAA19655.1| EG:132E8.1 [Drosophila melanogaster]
Length = 485
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ T+ ++ LF G + + +D +TG GY FV + ++ +AI+ L
Sbjct: 95 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKL 154
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG Y+ +KV +A R + D LYV LS+ + ++ +FSPYG I
Sbjct: 155 NGFYV---RNKRLKVSYA---RPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQR 208
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L + RG AFV+++ RE A AI LN T GS QP+ VR+A+
Sbjct: 209 NILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGS-QPIWVRLAE 258
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P I D+ LYV + R ++ + +F +G +++ + +DK TG+ +
Sbjct: 165 KVSYARPGGQSIKDT----NLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPR 220
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV++ EEA AI+ALN + + G I VR A+
Sbjct: 221 GVAFVRYNKREEAQEAIKALN-NTVPEGGSQPIWVRLAE 258
>gi|32364102|gb|AAP80202.1| FCA-like protein [Triticum aestivum]
Length = 435
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 223 CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFG- 281
C FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADPK+PR GE RG AFG P
Sbjct: 1 CGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPRPGESRGGPAFGGPGVSS 60
Query: 282 -PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGN 327
+ +RP NL G + P+ S+RP ++ P F+N+G+
Sbjct: 61 RSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAPHQFNNFGS 105
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 330 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 387
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 388 EKPEEYILYEQQ-QQHQKL 405
>gi|32364087|gb|AAP80195.1| FCA-like protein [Triticum aestivum]
Length = 443
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 223 CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFG- 281
C FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADPK+PR GE RG AFG P
Sbjct: 1 CGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPRPGESRGGPAFGGPGVSS 60
Query: 282 -PNFLEPVRPPPNLGNSAGGQILPNVSYRPQHIFNNSHPQVFSNWGN 327
+ +RP NL G + P+ S+RP ++ P F+N+G+
Sbjct: 61 RSDAALVIRPTANLDEQIGRHMPPD-SWRPSSP-SSMAPHQFNNFGS 105
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 330 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 387
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ ++ QKL
Sbjct: 388 EKPEEYVLYEQQ-QQHQKL 405
>gi|26354232|dbj|BAC40744.1| unnamed protein product [Mus musculus]
Length = 305
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L V +P+ T+E++R LF G V L +DK G GY FV + ++A AI L
Sbjct: 1 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 60
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIF 211
NG + + +IKV +A E V LY+ L + ++K++E++FS +G I +
Sbjct: 61 NGLRL---QSKTIKVSYARPSSE--VIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 115
Query: 212 IVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIA 259
++ D+ SRG AF++F R A AI+ NG GS +P+ V+ A
Sbjct: 116 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 163
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 54/221 (24%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P+ + I D A LY++ +PRT T++D+ +F G +I + D+ TG +
Sbjct: 71 KVSYARPSSEVIKD----ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSR 126
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHP-VAPPDKLY------ 184
G F++F EA AI + NGH PG I V+FA ++ +A +LY
Sbjct: 127 GVAFIRFDKRSEAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARR 185
Query: 185 -----------------------------------------VGCLSKQTSKKEIEEVFSP 203
+ L + + + ++F P
Sbjct: 186 FGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGP 245
Query: 204 YGHIEDIFIVRD-ELKQSRGCAFVQFSHREMALAAISGLNG 243
+G + ++ ++RD + +G FV ++ E A AI+ LNG
Sbjct: 246 FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 286
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+++ + + A E + +F G V V + +D T + +G+ FV T +EEA AI +L
Sbjct: 225 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 284
Query: 152 NGHYI 156
NG+ +
Sbjct: 285 NGYRL 289
>gi|410950073|ref|XP_004001486.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Felis catus]
Length = 479
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 13/190 (6%)
Query: 135 FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSK 194
F+ + + A A AL+ PG I+V+ AD E KL+VG L+KQ S+
Sbjct: 24 FLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG--GRDRKLFVGMLNKQQSE 81
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
+++ +F P+G I++ ++R S+GCAFV+FS A AAI L+G+ TM G+ L
Sbjct: 82 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 141
Query: 255 VVRIADPKKPRT----GELRGNYAFGTPSFGPNFL-------EPVRPPPNLGNSAGGQIL 303
VV+ AD K RT ++ G TPS F ++ + +++G +
Sbjct: 142 VVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGSYLS 201
Query: 304 PNVSYRPQHI 313
P V++ P HI
Sbjct: 202 PGVAFSPCHI 211
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 91 KLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRA 150
KL+V + + +EED+ LF+ G + E + + G +G FVKF+ EA AI A
Sbjct: 69 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGP-DGSSKGCAFVKFSSHTEAQAAIHA 127
Query: 151 LNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSKKEIEEVFSPY 204
L+G PG +S+ V+FAD ++E + ++ VG L T + FSPY
Sbjct: 128 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQM-VGQLGILTPSLTLP--FSPY 178
>gi|195347606|ref|XP_002040343.1| GM19131 [Drosophila sechellia]
gi|194121771|gb|EDW43814.1| GM19131 [Drosophila sechellia]
Length = 488
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
L + +P+ T+ ++ LF G + + +D +TG GY FV + ++ +AI+ L
Sbjct: 95 LIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKL 154
Query: 152 NGHYIFPGEQASIKVRFADGEREHPVAPPD-KLYVGCLSKQTSKKEIEEVFSPYGHIEDI 210
NG Y+ +KV +A R + D LYV LS+ + ++ +FSPYG I
Sbjct: 155 NGFYV---RNKRLKVSYA---RPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQR 208
Query: 211 FIVRDELK-QSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIAD 260
I+RD+L + RG AFV+++ RE A AI LN T GS QP+ VR+A+
Sbjct: 209 NILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGS-QPIWVRLAE 258
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 72 KRGFNHPAPDHINDSGIPAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQ 131
K + P I D+ LYV + R ++ + +F +G +++ + +DK TG+ +
Sbjct: 165 KVSYARPGGQSIKDT----NLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPR 220
Query: 132 GYCFVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFAD 170
G FV++ EEA AI+ALN + + G I VR A+
Sbjct: 221 GVAFVRYNKREEAQEAIKALN-NTVPEGGSQPIWVRLAE 258
>gi|32364081|gb|AAP80192.1| FCA-like protein [Triticum aestivum]
Length = 423
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 223 CAFVQFSHREMALAAISGLNGTFTMRGSDQPLVVRIADPKKPRTGELRGNYAFGTPSFG- 281
C FV+FS +E ALAA++ L+GT+ MRG +QPL+VR ADPK+PR GE RG AFG P
Sbjct: 1 CGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPRPGESRGGPAFGGPGVSS 60
Query: 282 -PNFLEPVRPPPNLGNSAGGQILPNVSYRPQ-------HIFNNSHP 319
+ +RP NL G + P+ S+RP H FNN P
Sbjct: 61 RSDAALVIRPTANLDEQIGRHMPPD-SWRPSSPSSMAPHQFNNFGP 105
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 404 PRSGNNPQTSASAST--IPTVPQ---SPQVAASPECDWSEHTCPDGNKYYYNCETCESRW 458
P N P A+ T I +PQ SP V+ + C+W+EHT P+G KYYYN T ES+W
Sbjct: 331 PVQSNTPGAPAAMMTTKINAIPQQVNSPAVSLT--CNWTEHTSPEGFKYYYNSITRESKW 388
Query: 459 DKPEEYLLFEQQIEKQQKL 477
+KPEEY+L+EQQ + QKL
Sbjct: 389 EKPEEYILYEQQ-QHHQKL 406
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 92 LYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRAL 151
+YV + T TEED++ +F E+G + V+ +D G+ + + FV F ++A ++ AL
Sbjct: 210 VYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDG-NGKSRCFGFVNFENPDDAAQSVEAL 268
Query: 152 NGH-------YIFPGEQAS-----IKVRFADGEREHPVAPPDK-----LYVGCLSKQTSK 194
NG Y+ ++ S +K RF +E DK LYV L +
Sbjct: 269 NGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETV----DKFQGLNLYVKNLDDSITD 324
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTFTMRGSDQPL 254
+++E+FS +G I ++RD SRG FV FS E A A++ +NG + +PL
Sbjct: 325 DKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTEMNGKMVV---SKPL 381
Query: 255 VVRIADPKKPRTGELRGNYAFGTPSFGPNF--LEPVRPP--PNLG 295
V +A K+ R L+ Y+ P+ P P+ PP P +G
Sbjct: 382 YVALAQRKEERRARLQAQYSQIRPAMAPPIGPRMPIYPPGTPGIG 426
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 79 APDHINDSGI----PAKLYVAPVPRTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYC 134
AP+ + +G+ P LYV + + TE + LF +HG V+ + + +D + + GY
Sbjct: 14 APNGVVSNGVNQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYG 73
Query: 135 FVKFTIFEEAGNAIRALNGHYIFPGEQASIKVRFADGEREHPVAPPDKLYVGCLSKQTSK 194
+V + +A AI LN P I++ ++ + + +Y+ L K
Sbjct: 74 YVNYNNVHDAAQAIEVLN---FTPVNGKPIRIMYSYRDPTIRKSGTGNIYIKNLDKAIDN 130
Query: 195 KEIEEVFSPYGHIEDIFIVRDELKQSRGCAFVQFSHREMALAAISGLNGTF 245
K + + FS +G I + D L QS G FVQF + E A AI LNG
Sbjct: 131 KALHDTFSAFGSILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNGML 181
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 19/238 (7%)
Query: 39 NYHSHHRRHYQYDQMSSEPTDFFNGQPMPFIGRKRGFNHPAPDHINDSGIPAKLYVAPVP 98
NY++ H + ++ P NG+P+ + +++ P I SG +Y+ +
Sbjct: 76 NYNNVHDAAQAIEVLNFTPV---NGKPIRIM-----YSYRDP-TIRKSGT-GNIYIKNLD 125
Query: 99 RTATEEDIRPLFEEHGNVIEVVLPKDKRTGQQQGYCFVKFTIFEEAGNAIRALNGHYIFP 158
+ + + F G+++ + D GQ GY FV+F E A NAI LNG +
Sbjct: 126 KAIDNKALHDTFSAFGSILSCKVATDS-LGQSLGYGFVQFDNEESAKNAIDKLNGM-LLN 183
Query: 159 GEQASIKVRFADGEREHPV--APPDKLYVGCLSKQTSKKEIEEVFSPYGHIEDIFIVRDE 216
+Q + ERE + A + +YV LS+ T++++++++F YG I ++RD
Sbjct: 184 DKQVYVGPFLRKQERESAIDKATFNNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDG 243
Query: 217 LKQSRGCAFVQFSHREMALAAISGLNG-TFTMRGSDQPLVVRIADPKKPRTGELRGNY 273
+SR FV F + + A ++ LNG TF ++ V A K R EL+G +
Sbjct: 244 NGKSRCFGFVNFENPDDAAQSVEALNGKTF----DEKEWYVGKAQKKSEREVELKGRF 297
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,104,790,263
Number of Sequences: 23463169
Number of extensions: 412143350
Number of successful extensions: 1378286
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13179
Number of HSP's successfully gapped in prelim test: 11349
Number of HSP's that attempted gapping in prelim test: 1208525
Number of HSP's gapped (non-prelim): 111458
length of query: 537
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 389
effective length of database: 8,886,646,355
effective search space: 3456905432095
effective search space used: 3456905432095
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)