Query 009358
Match_columns 537
No_of_seqs 223 out of 1916
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 03:23:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.1E-91 3.8E-96 759.0 53.1 476 27-537 1-502 (552)
2 3sqr_A Laccase; multicopper ox 100.0 2.4E-91 8.2E-96 750.3 50.8 440 26-537 64-521 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 1.6E-87 5.3E-92 712.9 49.9 435 29-537 3-448 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 3.3E-87 1.1E-91 710.5 49.5 434 29-537 4-448 (495)
5 1v10_A Laccase; multicopper bl 100.0 9E-86 3.1E-90 706.9 47.1 436 26-537 20-468 (521)
6 1zpu_A Iron transport multicop 100.0 4E-85 1.4E-89 702.7 51.0 438 28-537 1-458 (534)
7 2q9o_A Laccase-1; multicopper 100.0 7.4E-83 2.5E-87 689.3 49.8 447 25-537 29-498 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 3.2E-82 1.1E-86 677.2 46.4 429 30-537 5-447 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 2.6E-73 9E-78 599.1 37.0 384 24-537 11-417 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.4E-73 4.9E-78 601.8 30.5 381 28-537 17-414 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 1.4E-70 4.7E-75 588.8 32.6 397 28-537 35-452 (534)
12 2wsd_A Spore coat protein A; o 100.0 2E-69 6.8E-74 579.6 37.3 404 28-537 24-487 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 2.1E-68 7.3E-73 562.5 37.5 393 25-537 46-458 (481)
14 3aw5_A Multicopper oxidase; be 100.0 2.3E-69 8E-74 568.8 28.6 370 29-535 20-426 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 7E-67 2.4E-71 575.2 36.4 437 27-537 30-568 (612)
16 3od3_A Blue copper oxidase CUE 100.0 1.5E-65 5.1E-70 540.4 34.4 407 27-536 15-462 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 4.2E-64 1.4E-68 542.3 38.9 432 26-537 29-568 (612)
18 3g5w_A Multicopper oxidase typ 100.0 2.6E-55 8.7E-60 441.8 31.6 271 28-315 1-278 (318)
19 2zwn_A Two-domain type laccase 100.0 5.2E-54 1.8E-58 436.9 34.0 271 28-315 2-279 (339)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 1E-50 3.5E-55 466.8 34.4 270 23-315 15-358 (1065)
21 1kbv_A ANIA, major outer membr 100.0 6.4E-50 2.2E-54 404.8 29.5 263 24-315 33-309 (327)
22 3gdc_A Multicopper oxidase; be 100.0 8.3E-49 2.8E-53 389.7 30.1 238 25-294 30-274 (288)
23 2zoo_A Probable nitrite reduct 100.0 9.2E-46 3.2E-50 390.7 30.7 268 22-316 21-300 (442)
24 1mzy_A Copper-containing nitri 100.0 2.8E-45 9.5E-50 372.5 29.4 268 24-315 27-320 (333)
25 3kw8_A Laccase, putative coppe 100.0 9.4E-46 3.2E-50 365.4 25.1 240 24-314 2-266 (276)
26 3tas_A Small laccase, multi-co 100.0 2.8E-45 9.5E-50 368.4 23.0 245 21-314 5-272 (313)
27 2r7e_A Coagulation factor VIII 100.0 1.1E-45 3.8E-50 408.9 21.6 227 45-295 63-316 (742)
28 3t9w_A Small laccase, multi-co 100.0 6.8E-45 2.3E-49 362.7 23.3 241 25-314 25-288 (299)
29 1oe1_A Dissimilatory copper-co 100.0 5.9E-44 2E-48 363.4 29.6 269 25-315 28-320 (336)
30 2bw4_A Copper-containing nitri 100.0 5.7E-44 1.9E-48 364.1 27.0 268 24-315 33-326 (340)
31 2dv6_A Nitrite reductase; elec 100.0 3.1E-42 1.1E-46 364.5 22.9 372 26-537 25-410 (447)
32 3cg8_A Laccase; oxidoreductase 100.0 1.1E-41 3.8E-46 345.8 24.9 238 26-315 45-308 (343)
33 1sdd_B Coagulation factor V; c 100.0 1.8E-41 6.2E-46 373.6 26.6 263 26-312 3-326 (647)
34 1sdd_A Coagulation factor V; c 100.0 4.2E-43 1.5E-47 351.6 10.7 216 49-295 50-287 (306)
35 2dv6_A Nitrite reductase; elec 100.0 4.5E-40 1.5E-44 348.0 32.4 260 26-315 160-435 (447)
36 2r7e_B Coagulation factor VIII 100.0 2.6E-41 8.9E-46 374.4 11.4 250 25-294 129-442 (770)
37 2j5w_A Ceruloplasmin, ferroxid 100.0 5.7E-39 1.9E-43 369.3 19.9 363 46-537 616-1035(1065)
38 2r7e_A Coagulation factor VIII 100.0 8.3E-38 2.8E-42 346.0 7.3 217 56-295 448-698 (742)
39 2zwn_A Two-domain type laccase 99.8 1.1E-20 3.6E-25 191.7 13.8 222 193-537 24-248 (339)
40 3g5w_A Multicopper oxidase typ 99.8 1.9E-19 6.5E-24 180.6 12.7 224 193-537 23-247 (318)
41 2uxt_A Protein SUFI, SUFI; oxi 99.8 4.6E-18 1.6E-22 178.8 23.6 256 29-313 152-441 (451)
42 3gdc_A Multicopper oxidase; be 99.8 4.1E-19 1.4E-23 176.0 14.0 211 192-537 54-265 (288)
43 2xu9_A Laccase; oxidoreductase 99.8 9.7E-18 3.3E-22 176.0 21.1 235 28-295 145-427 (439)
44 3cg8_A Laccase; oxidoreductase 99.8 2.5E-18 8.5E-23 174.2 13.5 195 211-537 75-283 (343)
45 1v10_A Laccase; multicopper bl 99.7 1.8E-15 6.1E-20 161.9 25.1 239 48-295 191-478 (521)
46 1hfu_A Laccase 1; oxidoreducta 99.7 2.5E-15 8.6E-20 160.2 25.8 259 31-295 143-457 (503)
47 3kw8_A Laccase, putative coppe 99.7 1.7E-16 5.9E-21 156.0 14.3 195 211-537 34-242 (276)
48 3zx1_A Oxidoreductase, putativ 99.7 3E-15 1E-19 157.6 21.1 243 30-295 181-468 (481)
49 3t9w_A Small laccase, multi-co 99.7 5E-16 1.7E-20 154.3 13.8 195 211-537 56-264 (299)
50 3t6v_A Laccase; beta barrel, o 99.6 6.3E-15 2.1E-19 156.1 20.7 243 47-295 167-458 (495)
51 3pxl_A Laccase; 4-copper prote 99.6 3.1E-14 1.1E-18 150.8 23.9 242 47-295 165-458 (499)
52 1kbv_A ANIA, major outer membr 99.6 1.6E-15 5.5E-20 152.8 13.2 223 193-536 59-282 (327)
53 1zpu_A Iron transport multicop 99.6 5.5E-14 1.9E-18 150.6 24.5 228 48-295 167-468 (534)
54 1aoz_A Ascorbate oxidase; oxid 99.6 8E-14 2.7E-18 150.3 23.0 224 61-295 205-512 (552)
55 3od3_A Blue copper oxidase CUE 99.6 3.9E-14 1.3E-18 149.1 19.6 253 30-294 151-476 (488)
56 2g23_A PHS, phenoxazinone synt 99.6 1.6E-13 5.6E-18 148.1 24.7 232 47-295 253-578 (612)
57 2q9o_A Laccase-1; multicopper 99.6 3.1E-13 1.1E-17 145.7 26.1 245 48-296 195-509 (559)
58 3aw5_A Multicopper oxidase; be 99.6 5E-14 1.7E-18 147.8 18.2 231 30-295 138-436 (448)
59 3tas_A Small laccase, multi-co 99.6 3.3E-14 1.1E-18 142.2 15.5 195 211-537 40-248 (313)
60 3cvb_A Plastocyanin; cupredoxi 99.6 1.5E-15 5.2E-20 126.7 4.8 89 56-148 15-105 (105)
61 2wsd_A Spore coat protein A; o 99.5 5.6E-14 1.9E-18 150.1 14.1 220 47-295 229-497 (513)
62 3abg_A Bilirubin oxidase; clea 99.5 3.1E-13 1.1E-17 144.5 19.1 261 30-312 172-474 (534)
63 1sdd_A Coagulation factor V; c 99.5 6.8E-15 2.3E-19 146.8 5.7 86 195-292 52-148 (306)
64 1sdd_B Coagulation factor V; c 99.5 1.6E-13 5.6E-18 150.9 14.4 226 211-537 67-304 (647)
65 2bw4_A Copper-containing nitri 99.4 5.7E-13 1.9E-17 135.1 14.3 78 193-292 60-138 (340)
66 1iby_A Nitrosocyanin; RED copp 99.4 7.4E-13 2.5E-17 111.7 11.4 105 30-148 2-112 (112)
67 2zoo_A Probable nitrite reduct 99.4 1.2E-12 4E-17 137.7 14.9 222 193-536 49-272 (442)
68 2cal_A Rusticyanin; iron respi 99.4 5.2E-13 1.8E-17 118.8 10.1 99 44-147 46-154 (154)
69 3sqr_A Laccase; multicopper ox 99.4 2.3E-11 7.7E-16 130.6 24.4 239 48-295 225-531 (580)
70 2r7e_B Coagulation factor VIII 99.4 1.5E-13 5.1E-18 152.5 5.5 74 211-292 197-279 (770)
71 3gyr_A PHS, phenoxazinone synt 99.3 9.2E-11 3.1E-15 128.4 20.3 93 193-295 459-578 (612)
72 1fwx_A Nitrous oxide reductase 99.3 1.1E-11 3.9E-16 131.9 11.1 96 44-150 497-594 (595)
73 1oe1_A Dissimilatory copper-co 99.3 1.7E-10 5.7E-15 116.7 18.7 78 193-292 54-132 (336)
74 1mzy_A Copper-containing nitri 99.3 4.4E-11 1.5E-15 120.7 14.2 79 193-293 53-132 (333)
75 2ov0_A Amicyanin; beta-sandwic 99.2 4.4E-11 1.5E-15 99.4 9.0 78 55-147 28-105 (105)
76 2gim_A Plastocyanin; beta shee 99.0 1E-09 3.5E-14 91.2 7.7 83 60-148 20-106 (106)
77 2aan_A Auracyanin A; cupredoxi 98.9 9.3E-09 3.2E-13 89.9 10.4 88 59-147 34-139 (139)
78 1qhq_A Protein (auracyanin); e 98.8 7.3E-08 2.5E-12 84.2 12.5 88 60-148 33-140 (140)
79 4hci_A Cupredoxin 1; structura 98.7 4E-08 1.4E-12 80.6 8.8 73 60-147 28-100 (100)
80 3c75_A Amicyanin; copper prote 98.7 3.5E-08 1.2E-12 85.2 8.6 73 60-147 60-132 (132)
81 2plt_A Plastocyanin; electron 98.6 1.4E-07 4.7E-12 76.9 8.9 77 60-147 18-98 (98)
82 1pcs_A Plastocyanin; electron 98.6 1.2E-07 4.1E-12 77.4 8.2 80 60-147 19-98 (98)
83 1bxv_A Plastocyanin; copper pr 98.6 1.8E-07 6.2E-12 75.0 8.2 73 60-147 19-91 (91)
84 3erx_A Pseudoazurin; copper pr 98.5 6.1E-07 2.1E-11 76.1 11.5 75 60-149 21-95 (123)
85 1b3i_A PETE protein, protein ( 98.5 1.9E-07 6.6E-12 75.9 7.0 77 60-147 19-97 (97)
86 1kdj_A Plastocyanin; electron 98.5 4.6E-07 1.6E-11 74.4 8.3 82 60-147 17-102 (102)
87 3tu6_A Pseudoazurin (blue copp 98.5 3.3E-07 1.1E-11 78.2 7.6 76 60-150 23-98 (127)
88 1plc_A Plastocyanin; electron 98.4 8.5E-07 2.9E-11 72.4 9.1 77 60-147 17-99 (99)
89 1byp_A Protein (plastocyanin); 98.4 1E-06 3.6E-11 71.8 9.0 77 60-147 17-99 (99)
90 3ef4_A Pseudoazurin, blue copp 98.3 1.3E-06 4.4E-11 74.0 8.2 75 60-149 22-96 (124)
91 1id2_A Amicyanin; beta barrel, 98.3 5.5E-06 1.9E-10 68.5 10.1 73 60-147 34-106 (106)
92 1cuo_A Protein (azurin ISO-2); 98.2 2.6E-06 9E-11 72.8 7.9 89 60-148 18-129 (129)
93 1paz_A Pseudoazurin precursor; 98.2 4.6E-06 1.6E-10 70.8 8.9 75 60-149 21-95 (123)
94 1iuz_A Plastocyanin; electron 98.2 7.1E-06 2.4E-10 66.7 9.3 77 60-147 18-98 (98)
95 1pmy_A Pseudoazurin; electron 98.2 4.5E-06 1.5E-10 70.8 7.8 76 60-150 21-96 (123)
96 3ay2_A Lipid modified azurin p 98.2 2.1E-06 7.3E-11 76.4 6.0 89 60-148 58-167 (167)
97 2ccw_A Azurin II, AZN-2; elect 98.1 2.1E-05 7.2E-10 67.1 10.2 88 60-148 18-129 (129)
98 2iaa_C Azurin; quinoprotein, t 98.0 2.7E-05 9.2E-10 66.4 9.9 87 60-148 17-128 (128)
99 3sbq_A Nitrous-oxide reductase 98.0 2.6E-05 8.8E-10 81.5 11.5 87 49-149 547-638 (638)
100 1nwp_A Azurin; electron transp 98.0 3E-05 1E-09 66.1 9.8 87 60-147 18-128 (128)
101 2ux6_A Pseudoazurin; type-1 co 98.0 1.5E-05 5.1E-10 67.5 7.6 74 60-150 21-94 (122)
102 2aan_A Auracyanin A; cupredoxi 97.7 5.4E-05 1.8E-09 65.7 6.9 78 212-292 34-125 (139)
103 1iby_A Nitrosocyanin; RED copp 97.4 0.00058 2E-08 56.6 8.6 62 212-293 37-98 (112)
104 3cvb_A Plastocyanin; cupredoxi 97.3 0.00011 3.8E-09 60.2 2.6 73 212-291 18-90 (105)
105 3fsa_A Azurin; copper, cupredo 97.2 0.0028 9.7E-08 53.1 10.1 85 60-147 18-125 (125)
106 4hci_A Cupredoxin 1; structura 96.8 0.0036 1.2E-07 50.6 7.8 61 212-292 27-87 (100)
107 1qhq_A Protein (auracyanin); e 96.7 0.0075 2.6E-07 52.0 9.6 81 212-296 32-128 (140)
108 3s8f_B Cytochrome C oxidase su 96.6 0.011 3.8E-07 52.4 9.8 74 60-148 93-168 (168)
109 2cal_A Rusticyanin; iron respi 96.6 0.014 4.7E-07 51.2 10.3 84 194-292 52-139 (154)
110 2cua_A Protein (CUA); CUA cent 96.5 0.01 3.5E-07 50.8 9.0 74 60-148 60-135 (135)
111 1fwx_A Nitrous oxide reductase 96.4 0.029 1E-06 59.8 13.1 87 194-312 503-591 (595)
112 2gim_A Plastocyanin; beta shee 96.2 0.00083 2.8E-08 55.0 0.4 73 212-291 19-91 (106)
113 2plt_A Plastocyanin; electron 95.9 0.014 4.7E-07 46.7 6.3 68 212-291 17-84 (98)
114 1bxv_A Plastocyanin; copper pr 95.7 0.032 1.1E-06 43.8 7.3 60 212-291 18-77 (91)
115 3ay2_A Lipid modified azurin p 95.6 0.011 3.9E-07 52.3 5.0 78 212-292 57-152 (167)
116 2iaa_C Azurin; quinoprotein, t 95.6 0.026 8.8E-07 47.8 6.7 78 212-292 16-113 (128)
117 2ccw_A Azurin II, AZN-2; elect 95.5 0.012 4.1E-07 49.9 4.5 79 212-292 17-114 (129)
118 1pcs_A Plastocyanin; electron 95.5 0.011 3.8E-07 47.3 4.1 67 212-291 18-84 (98)
119 1cuo_A Protein (azurin ISO-2); 95.5 0.0091 3.1E-07 50.7 3.6 78 212-292 17-114 (129)
120 1nwp_A Azurin; electron transp 95.4 0.014 4.7E-07 49.5 4.4 79 212-292 17-114 (128)
121 1kdj_A Plastocyanin; electron 95.1 0.015 5.2E-07 46.9 3.6 65 212-291 16-88 (102)
122 3fsa_A Azurin; copper, cupredo 94.9 0.0085 2.9E-07 50.2 1.7 77 212-291 17-113 (125)
123 1b3i_A PETE protein, protein ( 94.9 0.028 9.5E-07 44.8 4.6 64 212-291 18-83 (97)
124 2ov0_A Amicyanin; beta-sandwic 94.7 0.066 2.3E-06 43.4 6.5 63 212-292 32-94 (105)
125 1byp_A Protein (plastocyanin); 94.4 0.045 1.5E-06 43.7 4.9 68 212-291 16-85 (99)
126 1plc_A Plastocyanin; electron 93.8 0.073 2.5E-06 42.5 5.0 68 212-291 16-85 (99)
127 3sbq_A Nitrous-oxide reductase 93.4 0.64 2.2E-05 48.9 12.3 77 212-311 557-635 (638)
128 1iuz_A Plastocyanin; electron 93.2 0.16 5.5E-06 40.4 6.1 69 212-292 17-85 (98)
129 3erx_A Pseudoazurin; copper pr 92.4 0.16 5.6E-06 42.4 5.2 74 212-312 20-93 (123)
130 2cua_A Protein (CUA); CUA cent 91.5 1.7 5.8E-05 36.8 10.7 60 214-294 61-120 (135)
131 1id2_A Amicyanin; beta barrel, 91.0 0.46 1.6E-05 38.4 6.4 63 212-292 33-95 (106)
132 3c75_A Amicyanin; copper prote 90.5 0.45 1.5E-05 40.2 6.1 63 212-292 59-121 (132)
133 3s8f_B Cytochrome C oxidase su 89.0 1.6 5.6E-05 38.4 8.6 60 214-294 94-153 (168)
134 3tu6_A Pseudoazurin (blue copp 87.6 0.19 6.4E-06 42.3 1.6 75 212-313 22-96 (127)
135 1paz_A Pseudoazurin precursor; 87.0 0.39 1.3E-05 40.1 3.2 75 212-313 20-94 (123)
136 2ux6_A Pseudoazurin; type-1 co 85.8 0.63 2.2E-05 38.7 3.9 72 212-312 20-91 (122)
137 1pmy_A Pseudoazurin; electron 85.7 0.51 1.7E-05 39.3 3.2 74 212-312 20-93 (123)
138 3ef4_A Pseudoazurin, blue copp 83.6 0.63 2.1E-05 38.9 2.8 74 212-312 21-94 (124)
139 3isy_A Bsupi, intracellular pr 81.4 9.6 0.00033 31.3 9.2 74 219-293 16-102 (120)
140 3isy_A Bsupi, intracellular pr 71.8 33 0.0011 28.0 9.8 63 60-133 34-101 (120)
141 1cyx_A CYOA; electron transpor 68.3 13 0.00045 33.5 7.2 61 214-295 42-102 (205)
142 1cyx_A CYOA; electron transpor 68.3 12 0.00041 33.8 6.9 75 60-149 41-118 (205)
143 3hb3_B Cytochrome C oxidase su 56.8 27 0.00091 33.6 7.5 76 60-150 189-266 (298)
144 2gsm_B Cytochrome C oxidase su 54.7 30 0.001 32.6 7.4 76 60-150 171-248 (262)
145 2r39_A FIXG-related protein; s 51.7 36 0.0012 27.5 6.6 47 221-277 33-81 (118)
146 1yew_A Particulate methane mon 46.2 74 0.0025 31.1 8.6 16 105-120 319-334 (382)
147 2p9r_A Alpha-2-M, alpha-2-macr 45.6 80 0.0027 24.4 7.7 70 216-292 12-84 (102)
148 2gsm_B Cytochrome C oxidase su 44.6 72 0.0025 29.9 8.3 61 214-295 172-232 (262)
149 1xwv_A DER F II; beta sheets, 44.5 37 0.0013 28.1 5.6 70 51-121 16-93 (129)
150 3hb3_B Cytochrome C oxidase su 40.8 84 0.0029 30.0 8.2 62 213-295 189-250 (298)
151 2f1e_A Protein APAG; APAG prot 39.1 28 0.00095 28.8 3.9 49 71-120 34-88 (127)
152 1nep_A EPV20, BNPC2, epididyma 38.2 40 0.0014 27.8 4.9 63 59-121 25-95 (130)
153 1v54_B Cytochrome C oxidase po 37.7 67 0.0023 29.4 6.8 75 60-149 140-216 (227)
154 1xvs_A Protein APAG; MCSG APC2 36.5 27 0.00092 28.9 3.4 49 71-120 33-87 (126)
155 1v54_B Cytochrome C oxidase po 31.8 80 0.0027 28.9 6.2 61 213-294 140-200 (227)
156 1xq4_A Protein APAG; all beta 31.8 39 0.0013 28.4 3.7 44 71-117 38-89 (139)
157 3kmh_A D-lyxose isomerase; cup 31.5 52 0.0018 30.3 4.7 50 60-116 129-184 (246)
158 2c34_A ICP, inhibitor of cyste 31.3 2E+02 0.0067 23.1 7.9 68 59-127 14-89 (116)
159 1tza_A APAG protein, SOR45; st 29.2 35 0.0012 28.5 2.9 49 71-120 33-87 (134)
160 3kmh_A D-lyxose isomerase; cup 29.2 93 0.0032 28.6 6.0 56 213-273 129-184 (246)
161 1fft_B Ubiquinol oxidase; elec 26.8 64 0.0022 31.2 4.8 60 214-294 152-211 (315)
162 4ubp_B Protein (urease (chain 26.5 1.1E+02 0.0038 24.9 5.3 59 61-119 18-88 (126)
163 4ac7_B Urease subunit beta; hy 26.5 1.1E+02 0.0038 24.9 5.3 59 61-119 18-88 (126)
164 2hj1_A Hypothetical protein; s 26.3 22 0.00077 27.9 1.2 24 49-72 59-82 (97)
165 3rpf_C Molybdopterin convertin 24.8 28 0.00097 25.4 1.5 24 49-72 43-67 (74)
166 2h7w_A Chagasin; beta-strands, 24.5 2.9E+02 0.01 22.6 8.0 65 59-127 32-104 (131)
167 1xvs_A Protein APAG; MCSG APC2 24.2 60 0.0021 26.7 3.5 51 222-275 31-85 (126)
168 2wtp_A ORF131 protein, CZCE; m 24.2 24 0.00081 29.3 1.0 23 214-236 72-94 (131)
169 2xzz_A Protein-glutamine gamma 24.1 86 0.003 24.7 4.3 52 68-127 22-79 (102)
170 2x3c_A Toxic extracellular end 23.2 2.8E+02 0.0097 26.9 8.8 49 243-292 66-127 (343)
171 2f1e_A Protein APAG; APAG prot 22.8 76 0.0026 26.2 3.9 50 222-274 32-85 (127)
172 1tza_A APAG protein, SOR45; st 22.2 67 0.0023 26.8 3.4 51 222-275 31-85 (134)
173 3idu_A Uncharacterized protein 22.1 3.2E+02 0.011 22.2 9.4 67 216-292 28-96 (127)
174 2wtp_A ORF131 protein, CZCE; m 22.1 43 0.0015 27.7 2.2 17 61-77 72-88 (131)
175 3lag_A Uncharacterized protein 20.2 1.6E+02 0.0056 22.5 5.2 22 476-497 27-50 (98)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.1e-91 Score=759.00 Aligned_cols=476 Identities=30% Similarity=0.539 Sum_probs=377.1
Q ss_pred CccEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCCcccc
Q 009358 27 SITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAYITQ 105 (537)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~vtq 105 (537)
+++|+|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|.|+ ++++|||||+++..++|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 46899999999999999999999999999999999999999999999999997 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHHHHHhhc
Q 009358 106 CPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQ 184 (537)
Q Consensus 106 ~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~ 184 (537)
|+|+||++|+|+|++ +++||||||||.+.|+ +||+|+|||++++....++ ..|+|++|+|+||++.+..+++.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999998 8999999999999988 8999999999986554454 346899999999999988776543322
Q ss_pred CC-CCCCCCCcEEEcCccCCCcccCC-------------C-----CcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeE
Q 009358 185 TG-AGPNVSDAYTINGLPGPLYNCSA-------------K-----DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSV 245 (537)
Q Consensus 185 ~g-~~~~~~~~~liNG~~~~~~~~~~-------------~-----~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 245 (537)
.. .....+++++|||+.. ++|+. . ..+.++|++|++|||||||+|....+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1112468999999974 33431 1 12379999999999999999999999999999999
Q ss_pred EEEEecCCCcCceEecEEEECCcceEEEEEEe-CCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccc
Q 009358 246 TVVDVDAIYIKSFQTDILLITPGQTTNILLKA-KPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVS 324 (537)
Q Consensus 246 ~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~-~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~ 324 (537)
+|||+||.+++|+.++++.|+|||||||+|++ ++++ |+|||+++... +. .......|||+|.++.. .
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~--g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~-------~ 304 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPS--ENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSV-------S 304 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTT--CCEEEEEEEES-SC--CCSCCEEEEEEETTSCT-------T
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCC--CCEEEEEEccc-CC--CCCccEEEEEEECCCCC-------C
Confidence 99999999999999999999999999999999 4544 89999999764 21 23457899999987652 0
Q ss_pred cCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCe
Q 009358 325 IKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNF 404 (537)
Q Consensus 325 ~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~ 404 (537)
..+.... |..|.+++...... ..++.+.... +..+|..+++++.+.++++.. ...+.|+|||+
T Consensus 305 ~~p~~~~-p~~p~~~~~~~~~~--~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-------------~~~~~w~iNg~ 367 (552)
T 1aoz_A 305 KLPTSPP-PQTPAWDDFDRSKN--FTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-------------NGYVKWAINDV 367 (552)
T ss_dssp SCCSSCC-CCCCCTTCHHHHHH--HHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-------------TTEEEEEETTE
T ss_pred CCCCCCC-CCCCcccccccccc--ccccccccCC-CCCCCCCCcEEEEEEEeeccC-------------CCeEEEEECCC
Confidence 0001111 33444444322211 1233333222 333456678888887654321 23567999999
Q ss_pred eecCCChhhHHhhhcCCCCccccCCCCCCcc-cccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCC---CCCCC
Q 009358 405 SFILPSTALLQAHFFGQNGVYTTDFPSTPLI-KFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLG---AESHP 480 (537)
Q Consensus 405 ~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~---~~~HP 480 (537)
+|..|+.|+|.+.+.+++|.|..+++..++. .|+.+. .+.+...+.+++++.++.|++|||+|+|.+... ...||
T Consensus 368 s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP 446 (552)
T 1aoz_A 368 SLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT-PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHP 446 (552)
T ss_dssp EECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTS-CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEE
T ss_pred ccCCCCCCHHHHHhhcCccccccCCCcccccccccccc-ccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCC
Confidence 9999989999888887788887776554331 233331 111223456788899999999999999965322 46799
Q ss_pred ccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 481 LHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 481 ~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
||||||+||||++|.|.|++ .+...+|+.+|+|||||.||++||++|||+|||||+
T Consensus 447 ~HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~ 502 (552)
T 1aoz_A 447 WHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGV 502 (552)
T ss_dssp EEETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEE
T ss_pred EEEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeE
Confidence 99999999999999999987 445678999999999999999999999999999995
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.4e-91 Score=750.28 Aligned_cols=440 Identities=31% Similarity=0.503 Sum_probs=352.7
Q ss_pred cCccEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCCccc
Q 009358 26 ASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAYIT 104 (537)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~vt 104 (537)
.+++|+|+|+|++..+++||..+.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|..++||||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 467899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCCCCCCCCCCCce-eEEeeeeeccChHHHHHHh
Q 009358 105 QCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEV-PIIFGEWFNADTEAIINQS 182 (537)
Q Consensus 105 q~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~~~~~~ 182 (537)
||||+||++|+|+|++ +++||||||||.+.|+ +||+|+|||+++.+. + +|.|. +|+|+||++....++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~--~---yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA--D---YDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS--C---CSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC--C---CCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999998 7999999999999998 899999999987643 2 37787 9999999999988877655
Q ss_pred hcCCCCCCCCCcEEEcCccCCCcccCC---------CCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCC
Q 009358 183 LQTGAGPNVSDAYTINGLPGPLYNCSA---------KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAI 253 (537)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~~---------~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 253 (537)
...+ +..++++||||+.. ++|+. ...+.++|++|++|||||||+|....+.|+|+||+|+|||+||.
T Consensus 218 ~~~~--~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLGA--PPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTSC--CCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hccC--CCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 4432 45679999999954 44542 24679999999999999999999999999999999999999999
Q ss_pred CcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCC
Q 009358 254 YIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKP 333 (537)
Q Consensus 254 ~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p 333 (537)
+++|+.+++|.|++||||||+|++++++ |+|||++.+...|..........|||+|.++.. . . |
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~--g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~-------~---~----P 357 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAA--DNYWIRGNWGTTCSTNNEAANATGILRYDSSSI-------A---N----P 357 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCS--SEEEEECCCCTTTSCBTTGGGCEEEEESSTTCC-------C---C----C
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCC--CeEEEEEecccccCccCCCCceEEEEEECCCCC-------C---C----C
Confidence 9999999999999999999999999886 999999998665532233347899999976542 0 1 1
Q ss_pred CCCCCCCcc-cccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecC-CCh
Q 009358 334 TLPALNDTA-FAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFIL-PST 411 (537)
Q Consensus 334 ~~p~~~~~~-~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~-p~~ 411 (537)
..+.+.... +.......|.++. +..+|...+..+.+.++. +..+.|+|||++|.. +..
T Consensus 358 ~~~~~~~~~~~~~~~~~~L~P~~----~~~~~~~~~~~~~l~~~~----------------~~~~~w~iN~~s~~~~~~~ 417 (580)
T 3sqr_A 358 TSVGTTPRGTCEDEPVASLVPHL----ALDVGGYSLVDEQVSSAF----------------TNYFTWTINSSSLLLDWSS 417 (580)
T ss_dssp CCCCCCCCCCSCCSCGGGCCBSS----CCBCCSEEEEEEEEEEEE----------------SSSEEEEETTBCCCCCTTS
T ss_pred CCCCCCccchhhcccccccccCC----CCCCCCccceEEEEEecc----------------CCceeEEECCEecccCCCC
Confidence 111111111 1100112333332 222343444444444421 346789999999975 467
Q ss_pred hhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEee----CCCEEEEEEeeCCCCCCCCCCccccCCC
Q 009358 412 ALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLP----FNASVELVMQDTSTLGAESHPLHLHGFN 487 (537)
Q Consensus 412 pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~----~g~~veivi~N~~~~~~~~HP~HLHGh~ 487 (537)
|+|.+.+.+ ..+|+ ...+++.++ .|++|||+|+|.... ...||||||||+
T Consensus 418 P~L~~~~~g-----~~~~~--------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~ 471 (580)
T 3sqr_A 418 PTTLKIFNN-----ETIFP--------------------TEYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHD 471 (580)
T ss_dssp CHHHHHHTT-----CCCCC--------------------GGGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCC
T ss_pred CchhhhhcC-----CccCC--------------------CCcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCce
Confidence 766554432 11221 123455554 699999999996522 479999999999
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 488 FFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 488 F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
||||++|.|.|+++.+...+|+.||++|||+.||++||++|||+|||||+
T Consensus 472 F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~ 521 (580)
T 3sqr_A 472 FFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGS 521 (580)
T ss_dssp EEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEE
T ss_pred EEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCee
Confidence 99999999999987766789999999999999999999999999999995
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.6e-87 Score=712.90 Aligned_cols=435 Identities=28% Similarity=0.506 Sum_probs=339.9
Q ss_pred cEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCC-----CceeEecCccccCCCCCCCCCcc
Q 009358 29 TRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLLSGWADGPAYI 103 (537)
Q Consensus 29 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~v 103 (537)
..+|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|.|++ +++|||||+++..++||||+|++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4689999999999999999999999999999999999999999999999974 79999999999999999999999
Q ss_pred cccccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCC-CCCCCCCCCceeEEeeeeeccChHHHHHH
Q 009358 104 TQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGV-PYPFPKPYKEVPIIFGEWFNADTEAIINQ 181 (537)
Q Consensus 104 tq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~ 181 (537)
|||||+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ..+++..++|++|+++|||+.....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999878999999999999998 899999999987542 2223333567899999999976532
Q ss_pred hhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEec
Q 009358 182 SLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTD 261 (537)
Q Consensus 182 ~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 261 (537)
.+..+..++++||||+.. +..|.....+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 223344679999999942 3333344678999999999999999999999999999999999999999999999999
Q ss_pred EEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCc
Q 009358 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDT 341 (537)
Q Consensus 262 ~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~ 341 (537)
+|.|++||||||+|+++++. |+|||++.+...+. .+......|||+|+++.. . .+.. +..+...
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~--g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~-------~---~p~~-~~~~~~~-- 298 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAV--DNYWIRANPNFGNV-GFDGGINSAILRYDGAPA-------V---EPTT-NQTTSVK-- 298 (499)
T ss_dssp BEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTSCS-------S---CCCC-CCCCCSS--
T ss_pred eEEECCCcEEEEEEECCCCC--ceEEEEEecccCcc-ccCCCceEEEEEeCCCCC-------C---CCCC-CCCCCCc--
Confidence 99999999999999999876 99999998754432 223334589999987652 0 1100 1001000
Q ss_pred ccccccccccccccCCCCCC-CCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcC
Q 009358 342 AFAFNYTTRLRSLANAQFPA-NVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFG 420 (537)
Q Consensus 342 ~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~ 420 (537)
.....+|+++.....|. ..+..+|+++.+.+++. +. .|+|||++|..|+.|+|.+...+
T Consensus 299 ---~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---------------~~--~w~iNg~s~~~~~~P~L~~~~~g 358 (499)
T 3pxl_A 299 ---PLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFN---------------GS--NFFINGASFVPPTVPVLLQILSG 358 (499)
T ss_dssp ---BCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEC---------------SS--CEEETTBCCCCCSSCHHHHHHTT
T ss_pred ---ccccccccccccccCCCcccCCCCcEEEEEEEEec---------------Cc--EEEEcCEecCCCCCchhhhhhcC
Confidence 01123455554333332 12345677776655432 22 58999999998888866544322
Q ss_pred CCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCC
Q 009358 421 QNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDP 500 (537)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~ 500 (537)
.+... + ......++.++.|++|||+|+|.+......||||||||+|+||+.+ |
T Consensus 359 ---~~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~-g---- 411 (499)
T 3pxl_A 359 ---AQTAQ--D-----------------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA-G---- 411 (499)
T ss_dssp ---CCSTT--T-----------------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT-T----
T ss_pred ---Ccccc--c-----------------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc-C----
Confidence 11100 0 1123568899999999999995322346889999999999999864 2
Q ss_pred CCCCCCCCCCCCCccceEEeCC---CCEEEEEEEecCCCC
Q 009358 501 SKDRKNFNLIDPVERNTVGVPS---GGWVAIRFRADNPGD 537 (537)
Q Consensus 501 ~~~~~~~n~~~P~~RDTv~vp~---~g~~viRf~adNPG~ 537 (537)
...+|+.||++|||+.||+ +||++|||+|||||+
T Consensus 412 ---~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~ 448 (499)
T 3pxl_A 412 ---STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGP 448 (499)
T ss_dssp ---CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEE
T ss_pred ---CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCce
Confidence 2357899999999999997 999999999999994
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=3.3e-87 Score=710.50 Aligned_cols=434 Identities=27% Similarity=0.495 Sum_probs=338.0
Q ss_pred cEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCC-----CceeEecCccccCCCCCCCCCcc
Q 009358 29 TRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN-----NISIHWHGIRQLLSGWADGPAYI 103 (537)
Q Consensus 29 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~v 103 (537)
-.+|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|.|++ +++|||||+++..++||||+|++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3679999999999999999999999999999999999999999999999974 79999999999999999999999
Q ss_pred cccccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCC-CCCCCCCCCceeEEeeeeeccChHHHHHH
Q 009358 104 TQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGV-PYPFPKPYKEVPIIFGEWFNADTEAIINQ 181 (537)
Q Consensus 104 tq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~ 181 (537)
|||||+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ..+++..++|++|+++||++....++
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 9999999999999999878999999999999998 899999999987542 22233335678999999999876432
Q ss_pred hhcCCCCCCCCCcEEEcCccCCCcccC--CCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceE
Q 009358 182 SLQTGAGPNVSDAYTINGLPGPLYNCS--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQ 259 (537)
Q Consensus 182 ~~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~ 259 (537)
.+..+..++++||||+.. +.|. ....+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|+.
T Consensus 161 ---~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 223344789999999942 3333 235678999999999999999999999999999999999999999999999
Q ss_pred ecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCC
Q 009358 260 TDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALN 339 (537)
Q Consensus 260 ~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~ 339 (537)
++++.|+|||||||+|+++++. |+|||++.+...+. .+......|||+|.++.. . .+.. +. +...
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~--g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~-------~---~p~~-~~-~~~~ 300 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPV--GNYWIRANPNSGGE-GFDGGINSAILRYDGATT-------A---DPVT-VA-STVH 300 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTSCS-------S---CCCC-CC-CSSC
T ss_pred eeeEEEcCceEEEEEEECCCCC--ceEEEEEecccCcc-ccCCCceEEEEEECCCCC-------C---CCCC-CC-CCCC
Confidence 9999999999999999999876 99999998754432 223334589999987652 0 0100 00 0000
Q ss_pred CcccccccccccccccCCCCCC-CCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhh
Q 009358 340 DTAFAFNYTTRLRSLANAQFPA-NVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHF 418 (537)
Q Consensus 340 ~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~ 418 (537)
. .......|+++.....|. ..+..+|.++.+.+++. +. .|+|||++|..|+.|+|.+..
T Consensus 301 ~---~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---------------~~--~w~iNg~s~~~~~~P~L~~~~ 360 (495)
T 3t6v_A 301 T---KCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFA---------------CG--NFVINGVSFTPPTVPVLLQIC 360 (495)
T ss_dssp S---SBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEE---------------TT--EEEETTBCCCCCSSCHHHHHH
T ss_pred c---cccccccccccccccCCCccCCCCCcEEEEEEEEec---------------Cc--EEEEcCEecCCCCCcchhhhh
Confidence 0 001112455554332222 12345677776655432 22 589999999988888655433
Q ss_pred cCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCC
Q 009358 419 FGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNY 498 (537)
Q Consensus 419 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~ 498 (537)
. +.+... + .....+++.++.|++|||+|+|. .....||||||||+|+||+.+ |
T Consensus 361 ~---g~~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~-g-- 413 (495)
T 3t6v_A 361 S---GANTAA--D-----------------LLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESA-S-- 413 (495)
T ss_dssp T---TCCSST--T-----------------SSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECT-T--
T ss_pred c---CCcCcc--c-----------------ccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecC-C--
Confidence 2 211100 0 11235688999999999999841 235899999999999999864 2
Q ss_pred CCCCCCCCCCCCCCCccceEEeCC-CCEEEEEEEecCCCC
Q 009358 499 DPSKDRKNFNLIDPVERNTVGVPS-GGWVAIRFRADNPGD 537 (537)
Q Consensus 499 ~~~~~~~~~n~~~P~~RDTv~vp~-~g~~viRf~adNPG~ 537 (537)
...+|+.||++|||+.||+ +||++|||+|||||+
T Consensus 414 -----~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~ 448 (495)
T 3t6v_A 414 -----NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGP 448 (495)
T ss_dssp -----CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEE
T ss_pred -----CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCee
Confidence 2357899999999999997 899999999999994
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=9e-86 Score=706.94 Aligned_cols=436 Identities=28% Similarity=0.482 Sum_probs=336.5
Q ss_pred cCccEEEEEEEEEEEEeecCe-eeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-----CCceeEecCccccCCCCCCC
Q 009358 26 ASITRHYKFDIKMQNVTRLCH-TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-----NNISIHWHGIRQLLSGWADG 99 (537)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DG 99 (537)
.+..++|+|+|++..+++||. .+.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++..++|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 456788999999999999999 999999999999999999999999999999998 99999999999998999999
Q ss_pred CCcccccccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCC-CCCCCCCCCceeEEeeeeeccChHH
Q 009358 100 PAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGV-PYPFPKPYKEVPIIFGEWFNADTEA 177 (537)
Q Consensus 100 v~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~ 177 (537)
+|++|||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. +.+++..++|++|+++||++....+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 99999999999999999999768999999999999998 899999999987532 2234333479999999999988766
Q ss_pred HHHHhhcCCCCCCCCCcEEEcCccCCCcccC--CCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCc
Q 009358 178 IINQSLQTGAGPNVSDAYTINGLPGPLYNCS--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI 255 (537)
Q Consensus 178 ~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 255 (537)
+... .+.....+++++|||+.. +.|+ ....+.++|++|++|||||||+|....+.|+|+||+|+||++||.++
T Consensus 180 ~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 254 (521)
T 1v10_A 180 LFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH 254 (521)
T ss_dssp ---------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred Hhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccc
Confidence 5321 112234579999999964 4564 23457999999999999999999999999999999999999999999
Q ss_pred CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCC
Q 009358 256 KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTL 335 (537)
Q Consensus 256 ~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~ 335 (537)
+|+.++++.|+|||||||+|++++++ |+|||++.....+. .+......|||+|.++.. . . |..
T Consensus 255 ~p~~~~~l~l~pgqR~dvlv~~~~~~--g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~-------~---~----p~~ 317 (521)
T 1v10_A 255 QPLTVDSLTIFAGQRYSVVVEANQAV--GNYWIRANPSNGRN-GFTGGINSAIFRYQGAAV-------A---E----PTT 317 (521)
T ss_dssp EEEEESBEEECTTCEEEEEEECCSCS--SEEEEEEEESSSSC-SCGGGTTEEEEEETTCCS-------C---C----CCC
T ss_pred cceeeeeEEEcccceEEEEEEcCCCC--Cceeeeeccccccc-cCCCCceeEEEEECCCCC-------C---C----CCC
Confidence 99999999999999999999999876 99999998754332 122223479999987652 0 0 110
Q ss_pred CCCCCcccccccccccccccCCCCCC-CCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhH
Q 009358 336 PALNDTAFAFNYTTRLRSLANAQFPA-NVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALL 414 (537)
Q Consensus 336 p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll 414 (537)
+.. .... ....+++++...+.|. ..+...+.++.+.+++ + +..+.|+|||++|..+..|+|
T Consensus 318 ~~~-~~~~--~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~-~~~~~~~iNg~~~~~~~~P~l 379 (521)
T 1v10_A 318 SQN-SGTA--LNEANLIPLINPGAPGNPVPGGADINLNLRIGR--------------N-ATTADFTINGAPFIPPTVPVL 379 (521)
T ss_dssp CCC-CSCB--CCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC--------------C-SSSSCCEESSCCCCCCSSCHH
T ss_pred CCC-cccc--cchhhcccCCcccCCCcccCCcceEEEEEEEec--------------C-CceeEEEECCCcccCCCCchh
Confidence 000 0000 0012344443222221 1122345555443322 1 333468999999998877766
Q ss_pred HhhhcCCCCccc-cCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEee
Q 009358 415 QAHFFGQNGVYT-TDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQ 493 (537)
Q Consensus 415 ~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~ 493 (537)
.+...+ .+. .+ .+.+++++.++.|++|||+++| .+.||||||||+||||++
T Consensus 380 ~~~~~g---~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~~ 431 (521)
T 1v10_A 380 LQILSG---VTNPND--------------------LLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVRT 431 (521)
T ss_dssp HHHHHT---CCCGGG--------------------SSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEEC
T ss_pred hhhhcC---Cccccc--------------------CCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEec
Confidence 554332 111 11 1234678899999999999999 378999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCccceEEe-CCCCEEEEEEEecCCCC
Q 009358 494 GFGNYDPSKDRKNFNLIDPVERNTVGV-PSGGWVAIRFRADNPGD 537 (537)
Q Consensus 494 g~G~~~~~~~~~~~n~~~P~~RDTv~v-p~~g~~viRf~adNPG~ 537 (537)
+.|. .+|+.+|+|||||.| |++||++|||+|||||+
T Consensus 432 ~~~~--------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~ 468 (521)
T 1v10_A 432 PGSS--------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGP 468 (521)
T ss_dssp TTCS--------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEE
T ss_pred CCCC--------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCee
Confidence 7442 468899999999999 89999999999999994
No 6
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-85 Score=702.69 Aligned_cols=438 Identities=25% Similarity=0.390 Sum_probs=343.0
Q ss_pred ccEEEEEEEEEEEEeecC-eeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCCcccc
Q 009358 28 ITRHYKFDIKMQNVTRLC-HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAYITQ 105 (537)
Q Consensus 28 ~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~vtq 105 (537)
++|+|+|+|++..+++|| ..+.+|+|||++|||+|++++||+|+|+|+|.|+ ++++|||||+++..++||||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 479999999999999999 7999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHHHHHhhc
Q 009358 106 CPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSLQ 184 (537)
Q Consensus 106 ~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~ 184 (537)
|||+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+ + + .+|+|++|+|+||++....++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-p--~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF-P--Y-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC-C--S-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC-C--C-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999855999999999999998 89999999999863 2 2 347899999999999998887654432
Q ss_pred C---CCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEec
Q 009358 185 T---GAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTD 261 (537)
Q Consensus 185 ~---g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 261 (537)
. .+....++.+||||+.. +.++|++||+|||||||+|....+.|+|+||+|+|||+||.+++|+.++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12234679999999853 5899999999999999999999999999999999999999999999999
Q ss_pred EEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCC---CCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCC-
Q 009358 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG---TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPA- 337 (537)
Q Consensus 262 ~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~---~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~- 337 (537)
+|.|+|||||||+|++++.+ +++|||++.+...+.. ........|+|+|.++.. .+ ..... +..+.
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~-~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~-------~p-~~~~~-~~~~~~ 296 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDT-DKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAA-------LP-TQNYV-DSIDNF 296 (534)
T ss_dssp CEEECTTCEEEEEEECCSCS-SCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSC-------BC-CCCCC-SCSSCS
T ss_pred eEEECccceEEEEEEcCCCC-CCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCC-------CC-CCCcc-cccccc
Confidence 99999999999999998753 2799999986443211 122356789999987542 00 00000 11111
Q ss_pred CCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhh
Q 009358 338 LNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAH 417 (537)
Q Consensus 338 ~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~ 417 (537)
.++ ..++++... .++..+++++.+.+.+... .+ + ...|+|||++|..|+.|+|...
T Consensus 297 ~~~--------~~l~p~~~~----~~~~~~~~~~~l~~~~~~~----------~~-~-~~~~~iNg~s~~~~~~P~L~~~ 352 (534)
T 1zpu_A 297 LDD--------FYLQPYEKE----AIYGEPDHVITVDVVMDNL----------KN-G-VNYAFFNNITYTAPKVPTLMTV 352 (534)
T ss_dssp CCG--------GGCCBSSCC----CCCCSCSEEEEEEEEEEEC----------TT-S-CEEEEETTBCCCCCSSCHHHHH
T ss_pred ccc--------ccceeCCCC----CCCCCCCeEEEEEEEeecc----------CC-c-eeEEEECCCcccCCCCCceeee
Confidence 111 123333211 2334567887777655321 01 3 2358999999999988865443
Q ss_pred hcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCC-
Q 009358 418 FFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFG- 496 (537)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G- 496 (537)
+.. +.+ +.++. . +..+++++.++.|++|||+|+|.+ .+.||||||||+||||+++.+
T Consensus 353 ~~~--~~~----~~~~~-~------------~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~ 410 (534)
T 1zpu_A 353 LSS--GDQ----ANNSE-I------------YGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTY 410 (534)
T ss_dssp TTS--GGG----TTCGG-G------------GCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCC
T ss_pred ccc--Ccc----cCCCc-c------------cCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCc
Confidence 321 211 11111 1 223467889999999999999954 589999999999999999864
Q ss_pred ---------CCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 497 ---------NYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 497 ---------~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
.|+... .. .+..+|+|||||.||++||++|||+|||||+
T Consensus 411 ~~~~~G~p~~~~~~~-~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~ 458 (534)
T 1zpu_A 411 DDALGEVPHSFDPDN-HP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGV 458 (534)
T ss_dssp CGGGTCCCCCCBTTB-CC-CCCSSCEEESEEEECTTCEEEEEEECCSCEE
T ss_pred cccccCcccccCccc-cc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCee
Confidence 444321 11 2357899999999999999999999999994
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=7.4e-83 Score=689.28 Aligned_cols=447 Identities=24% Similarity=0.423 Sum_probs=340.5
Q ss_pred ccCccEEEEEEEEEEE--EeecCee-eEEEEEcCcCCCceEEEecCCEEEEEEEecC-CCCceeEecCccccCCCCCCCC
Q 009358 25 VASITRHYKFDIKMQN--VTRLCHT-KSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLLSGWADGP 100 (537)
Q Consensus 25 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv 100 (537)
+.+++++|+|++++.. +.++|.. +.+|+|||++|||+||+++||+|+|+|+|.| .++++|||||+++..++|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4667899999999998 8899999 9999999999999999999999999999999 6899999999999988999999
Q ss_pred CcccccccCC-CCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCCCCCCCCCCCce-eEEeeeeeccChHH
Q 009358 101 AYITQCPIQT-GQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEV-PIIFGEWFNADTEA 177 (537)
Q Consensus 101 ~~vtq~~i~P-G~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~ 177 (537)
|++|||+|+| |++|+|+|++ +++||||||||.+.|+ +||+|+|||++++.. .+|+|. +|+|+||++....+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 7899999999999888 899999999987642 237777 99999999998887
Q ss_pred HHHHhhcCCCCCCCCCcEEEcCccCCCcccCC-CCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC
Q 009358 178 IINQSLQTGAGPNVSDAYTINGLPGPLYNCSA-KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK 256 (537)
Q Consensus 178 ~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~ 256 (537)
+..... .+ .+..+++++|||+... .|.. +..+.++|++|++|||||||+|....+.|+|+||+|+||++||.+++
T Consensus 183 ~~~~~~-~~-~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ-NN-APPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT-TS-CCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh-cC-CCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 654332 22 3346799999999753 3532 34578999999999999999999999999999999999999999999
Q ss_pred ceEecEEEECCcceEEEEEEeCCCCCCceEEEEEee--ccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCC
Q 009358 257 SFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP--YATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPT 334 (537)
Q Consensus 257 P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~--~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~ 334 (537)
|+.++++.|+|||||||+|++++++ |+|||++.. ...|. ........|||+|.++.. . .|.. +.
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~--g~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~-------~---~P~~-~~ 324 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAP--DNYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPG-------G---LPTD-EG 324 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCS--SEEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCC-------S---CCCC-CC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCC--CcEEEEEEeccccccC-CCCCCceeEEEEECCCCC-------C---CCCC-CC
Confidence 9999999999999999999999875 899999987 33332 223345689999986542 0 0100 00
Q ss_pred CCCCCCcccccccccccccccCCCCCCC-CCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCC-Chh
Q 009358 335 LPALNDTAFAFNYTTRLRSLANAQFPAN-VPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILP-STA 412 (537)
Q Consensus 335 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~-~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p-~~p 412 (537)
.+. .+..+. ....+.++.....|.. .....+.++.+..... . +..+.|+|||++|..+ ..|
T Consensus 325 ~~~-~~~~~~--~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~iNg~s~~~~~~~P 387 (559)
T 2q9o_A 325 TPP-VDHQCL--DTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLT-------------G-TPLFVWKVNGSDINVDWGKP 387 (559)
T ss_dssp CCC-CCCTTC--CCSCCCBSSCCBCCCTTCCCCGGGEEEEEEECS-------------S-SSSCEEEETTBCCCCCTTSC
T ss_pred CcC-CCcccc--cccccccCCCCCCCCcccccceeEEEEEEeecC-------------C-CceEEEEECCEecccCCCCC
Confidence 010 010000 0012222211111110 1111234444443211 1 2345799999999765 567
Q ss_pred hHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeC-CCEEEEEEeeCCC-CCCCCCCccccCCCeeE
Q 009358 413 LLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPF-NASVELVMQDTST-LGAESHPLHLHGFNFFV 490 (537)
Q Consensus 413 ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~veivi~N~~~-~~~~~HP~HLHGh~F~V 490 (537)
+|...+.+. .+| ..+.+++.++. ++|++|+|+|... ...+.||||||||+|||
T Consensus 388 ~L~~~~~g~-----~~~--------------------~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~V 442 (559)
T 2q9o_A 388 IIDYILTGN-----TSY--------------------PVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLV 442 (559)
T ss_dssp HHHHHHHTC-----CCC--------------------CGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEE
T ss_pred cHhHhhcCC-----ccC--------------------CCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEE
Confidence 665544321 111 12355677765 5778888888431 01479999999999999
Q ss_pred EeecC---------CCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 491 IGQGF---------GNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 491 l~~g~---------G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
|++|. |.|++..+...+|+.+|+|||||.||++||++|||+|||||+
T Consensus 443 l~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~ 498 (559)
T 2q9o_A 443 LGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGA 498 (559)
T ss_dssp EEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEE
T ss_pred EecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCee
Confidence 99987 777654334568899999999999999999999999999994
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=3.2e-82 Score=677.15 Aligned_cols=429 Identities=30% Similarity=0.512 Sum_probs=332.8
Q ss_pred EEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-----CCceeEecCccccCCCCCCCCCccc
Q 009358 30 RHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-----NNISIHWHGIRQLLSGWADGPAYIT 104 (537)
Q Consensus 30 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv~~vt 104 (537)
.+|+|++++..+++||..+.+|+|||++ ||+||+++||+|+|+|+|.|+ ++++|||||+++..++|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4699999999999999999999999999 999999999999999999998 9999999999999889999999999
Q ss_pred ccccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCC-CCCCCCCCCceeEEeeeeeccChHHHHHHh
Q 009358 105 QCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGV-PYPFPKPYKEVPIIFGEWFNADTEAIINQS 182 (537)
Q Consensus 105 q~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 182 (537)
||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. +.+++..++|++|+++||++....++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 999999999999999768999999999999998 899999999987532 223433347999999999998766431
Q ss_pred hcCCCCCCCCCcEEEcCccCCCcccCC-CCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEec
Q 009358 183 LQTGAGPNVSDAYTINGLPGPLYNCSA-KDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTD 261 (537)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d 261 (537)
+ ...+++++|||+.. +.|.. ...+.++|++|++|||||||+|....+.|+|+||+|+||++||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13469999999963 56653 3458999999999999999999999999999999999999999999999999
Q ss_pred EEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCC---CCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCC
Q 009358 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG---TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPAL 338 (537)
Q Consensus 262 ~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~---~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~ 338 (537)
++.|+|||||||+|++++++ |+|||++.....+.. .+......|||+|.++.. ........ |.....
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~--g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~-------~~p~~~~~-~~~~~l 303 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPV--DNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAAN-------ADPTTSAN-PNPAQL 303 (503)
T ss_dssp BEEECTTCEEEEEEECCSCS--SEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCS-------SCCCCCCC-SSCCBC
T ss_pred eEEEcccceEEEEEEcCCCc--cceeeeeccccCCcccccccCCCceEEEEEECCCCC-------CCCCCCCC-CccCCC
Confidence 99999999999999999876 899999986533211 122223479999987652 00000000 111111
Q ss_pred CCcccccccccccccccCCCCCC-CCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhh
Q 009358 339 NDTAFAFNYTTRLRSLANAQFPA-NVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAH 417 (537)
Q Consensus 339 ~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~ 417 (537)
+ ..+|+++...+.|. ..+...+.++.+.+++ + +. .|+|||++|..+..|+|.+.
T Consensus 304 ~--------~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~-~~--~~~iNg~~~~~~~~P~l~~~ 358 (503)
T 1hfu_A 304 N--------EADLHALIDPAAPGIPTPGAADVNLRFQLGF--------------S-GG--RFTINGTAYESPSVPTLLQI 358 (503)
T ss_dssp C--------GGGCBBSSSCSCSSCSSTTCSSEEEECCEEE--------------E-TT--EEEETTBCCCCCSSCHHHHH
T ss_pred c--------cccccccCccCCCCcccCCcceEEEEEEeec--------------c-Cc--eEEECCCccCCCCCcchhhh
Confidence 1 12344443222221 1122345444433221 1 22 58999999998877866554
Q ss_pred hcCCCCccc-cCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCC
Q 009358 418 FFGQNGVYT-TDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFG 496 (537)
Q Consensus 418 ~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G 496 (537)
..+ .+. .+ .+.+++++.++.|++|||+++|.. ..+.||||||||+|+||+++.|
T Consensus 359 ~~g---~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~ 413 (503)
T 1hfu_A 359 MSG---AQSAND--------------------LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGS 413 (503)
T ss_dssp HTT---CCSGGG--------------------SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTC
T ss_pred hcC---Cccccc--------------------CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCC
Confidence 322 111 11 123567899999999999999532 2579999999999999999744
Q ss_pred CCCCCCCCCCCCCCCCCccceEEe-CCCCEEEEEEEecCCCC
Q 009358 497 NYDPSKDRKNFNLIDPVERNTVGV-PSGGWVAIRFRADNPGD 537 (537)
Q Consensus 497 ~~~~~~~~~~~n~~~P~~RDTv~v-p~~g~~viRf~adNPG~ 537 (537)
. .+|+.+|+|||||.| |++||++|||+|||||+
T Consensus 414 ~--------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~ 447 (503)
T 1hfu_A 414 S--------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGP 447 (503)
T ss_dssp C--------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEE
T ss_pred C--------ccccCCCCeeeeEEecCCCceEEEEEEcCCCee
Confidence 2 467899999999999 99999999999999994
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.6e-73 Score=599.14 Aligned_cols=384 Identities=21% Similarity=0.322 Sum_probs=298.9
Q ss_pred cccCccEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcc
Q 009358 24 AVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (537)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~v 103 (537)
.+.+.+++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+++++++|||||+++.. ++||++
T Consensus 11 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~-- 86 (439)
T 2xu9_A 11 RSQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF-- 86 (439)
T ss_dssp ECBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT--
T ss_pred ccCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc--
Confidence 3456789999999999999999999999999999999999999999999999999999999999999865 799986
Q ss_pred cccccCCCCeEEEEEEeC-CCccceEEecchhh----hh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHH
Q 009358 104 TQCPIQTGQSYVYNFTIS-GQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEA 177 (537)
Q Consensus 104 tq~~i~PG~~~~y~f~~~-~~~Gt~wYH~h~~~----~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 177 (537)
+.|+||++|+|+|+++ +++||||||||.++ |. +||+|+|||+++.+.. +....++|++|+++||++.....
T Consensus 87 --~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~ 163 (439)
T 2xu9_A 87 --LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRP 163 (439)
T ss_dssp --CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEE
T ss_pred --ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCc
Confidence 4599999999999985 58999999999853 55 8999999999875321 11124789999999999875310
Q ss_pred H--HHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCc
Q 009358 178 I--INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI 255 (537)
Q Consensus 178 ~--~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 255 (537)
. .......| ..++.++|||+.. +.++|++| +|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 164 ~~~~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 229 (439)
T 2xu9_A 164 APHTPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFL 229 (439)
T ss_dssp CCCCHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred CCCCccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCC
Confidence 0 00000111 2358999999964 47999999 9999999999999999999999999999999998
Q ss_pred -CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCC--------------CCCcceEEEEEEecCCCCCCC
Q 009358 256 -KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGT--------------FDNSTVAGILEYEAPAKFPRS 320 (537)
Q Consensus 256 -~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~--------------~~~~~~~ail~Y~~~~~~~~~ 320 (537)
+|+.++++.|+|||||||+|+++++ |+|+|+|.....+... .......++++|.++..
T Consensus 230 ~~p~~~~~l~l~pgeR~dv~v~~~~~---G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 302 (439)
T 2xu9_A 230 EEPLEVSELLLAPGERAEVLVRLRKE---GRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK---- 302 (439)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCSS---EEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC----
T ss_pred CCceEeceEEECCceeEEEEEEcCCC---ceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc----
Confidence 8999999999999999999999984 9999999865432110 01235678889976441
Q ss_pred cccccCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEee
Q 009358 321 STVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAAS 400 (537)
Q Consensus 321 ~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (537)
.. + +|.. +.++. +. ..+ ..++++.+.+++. + ..|+
T Consensus 303 -------~~---~-~p~~------------l~~~~--~l--~~~-~~~r~~~l~~~~~---------------g--~~~~ 337 (439)
T 2xu9_A 303 -------PL---P-LPKA------------LSPFP--TL--PAP-VVTRRLVLTEDMM---------------A--ARFF 337 (439)
T ss_dssp -------CC---C-CCSC------------CCCCC--CC--CCC-SEEEEEEEEEEGG---------------G--TEEE
T ss_pred -------cc---c-Cccc------------CCCcc--cC--CCC-CcceEEEEEeecc---------------C--ceEe
Confidence 00 1 1110 00110 00 111 1235666655431 2 1588
Q ss_pred ecCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCC
Q 009358 401 VNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHP 480 (537)
Q Consensus 401 iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP 480 (537)
|||++|..+. ....++.|++++|+|+|.+ .+.||
T Consensus 338 iNg~~~~~~~-------------------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP 371 (439)
T 2xu9_A 338 INGQVFDHRR-------------------------------------------VDLKGQAQTVEVWEVENQG---DMDHP 371 (439)
T ss_dssp ETTBCCCTTC-------------------------------------------CCEEECTTCEEEEEEEECS---SSCEE
T ss_pred ECCEECCCCC-------------------------------------------CceecCCCCEEEEEEEcCC---CCCCC
Confidence 9999874221 1246789999999999954 58999
Q ss_pred ccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 481 LHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 481 ~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
||||||+||||+++.+. +.+|.|||||.||++||++|||+|||||.
T Consensus 372 ~HLHG~~F~Vl~~~g~~-----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~ 417 (439)
T 2xu9_A 372 FHLHVHPFQVLSVGGRP-----------FPYRAWKDVVNLKAGEVARLLVPLREKGR 417 (439)
T ss_dssp EEESSCCBEEEEETTEE-----------CSSCCCBSEEEECTTCEEEEEEECCSCEE
T ss_pred ceeCCCcEEEEeeCCCC-----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCC
Confidence 99999999999986332 34799999999999999999999999994
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.4e-73 Score=601.85 Aligned_cols=381 Identities=17% Similarity=0.200 Sum_probs=293.4
Q ss_pred ccEEEEEEEEEEEEee-cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCccccc
Q 009358 28 ITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (537)
Q Consensus 28 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~ 106 (537)
.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++..+ +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3688999999999988 799999999999999999999999999999999999999999999999876 99998 89
Q ss_pred ccCCCCeEEEEEEeCCCccceEEecch----hhhh-ccceeeEEEcCCCCCCCCCCC--CCCceeEEeeeeeccChHHHH
Q 009358 107 PIQTGQSYVYNFTISGQRGTLFWHAHI----SWLR-ATVYGPLVIFPKRGVPYPFPK--PYKEVPIIFGEWFNADTEAII 179 (537)
Q Consensus 107 ~i~PG~~~~y~f~~~~~~Gt~wYH~h~----~~~~-~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~~ 179 (537)
+|+||++|+|+|++.+++||||||||. ..|. +||+|+|||+++++...+++. .++|++|+++||++....++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 999999999999985569999999998 4455 899999999997653333322 378999999999987654321
Q ss_pred HHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEE-cCCeEEEEEecCCCc-Cc
Q 009358 180 NQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI-ANHSVTVVDVDAIYI-KS 257 (537)
Q Consensus 180 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~P 257 (537)
+...+.....+++++|||+.+ +.+++++| +|||||||+|..+.+.|+| |||+|+||++||.++ +|
T Consensus 172 --~~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 --YNEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp --CCCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred --cccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 111122234679999999974 47999999 9999999999999999999 899999999999998 89
Q ss_pred eEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCC-------CCCCcceEEEEEEecCCCCCCCcccccCCCCC
Q 009358 258 FQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQG-------TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPL 330 (537)
Q Consensus 258 ~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~-------~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~ 330 (537)
+.++++.|+|||||||+|++++. +.|+|++.....+.+ ........++++|..... .. +.
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~-------~~---~~ 305 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMSNG---DEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGL-------LP---LV 305 (451)
T ss_dssp EEESSEEECTTCEEEEEEECTTC---CCEEEEC----------------CCCCSCCEEEEEEECSC-------CC-----
T ss_pred eEeceEEECceeEEEEEEEeCCC---CEEEEEecCccccccccccccccCCCCCCcceEEEEecCC-------Cc---Cc
Confidence 99999999999999999999964 899999876443211 012234578999976542 00 00
Q ss_pred CCCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCC
Q 009358 331 MKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPS 410 (537)
Q Consensus 331 ~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~ 410 (537)
. ...|. .|.++... +.+...+++ +.++ + .|+|||++|..+
T Consensus 306 ~-~~~p~------------~L~~~~~~----~~~~~~~~~--~~l~-----------------~---~~~iNg~~f~~~- 345 (451)
T 2uxt_A 306 T-DSLPM------------RLLPTEIM----AGSPIRSRD--ISLG-----------------D---DPGINGQLWDVN- 345 (451)
T ss_dssp ---CCCS------------CSSSSCCC----CCCCSEEEE--EEEC-----------------S---SSSBTTBCCCTT-
T ss_pred c-ccCcc------------ccCCCCCC----CCCCcceEE--EEEe-----------------e---EEEECCEeCCCC-
Confidence 0 11111 12222111 112222333 3321 2 378999887322
Q ss_pred hhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeE
Q 009358 411 TALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFV 490 (537)
Q Consensus 411 ~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~V 490 (537)
...+.++.|++|+|+|+|. +.||||||||+|||
T Consensus 346 ------------------------------------------~~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~V 378 (451)
T 2uxt_A 346 ------------------------------------------RIDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQI 378 (451)
T ss_dssp ------------------------------------------CCCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEE
T ss_pred ------------------------------------------CCcEEcCCCCEEEEEEECC-----CCcCeEECCceEEE
Confidence 1125778999999999994 58999999999999
Q ss_pred EeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 491 IGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 491 l~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
|+++ | ..+++.+|.|||||.| +++++|||++||||.
T Consensus 379 l~~~-G--------~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~ 414 (451)
T 2uxt_A 379 RNVN-G--------AMPFPEDRGWKDTVWV--DGQVELLVYFGQPSW 414 (451)
T ss_dssp EEET-T--------BCCCGGGSSCBSEEEE--EEEEEEEEECCSCCB
T ss_pred EeeC-C--------cCCCcccCCCccEEEE--CCEEEEEEEeCCCCC
Confidence 9984 3 2356778999999999 899999999999984
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.4e-70 Score=588.79 Aligned_cols=397 Identities=19% Similarity=0.285 Sum_probs=295.3
Q ss_pred ccEEEEEEEEEE--EEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccc
Q 009358 28 ITRHYKFDIKMQ--NVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQ 105 (537)
Q Consensus 28 ~~~~~~l~~~~~--~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq 105 (537)
.+++|+|++++. .+.++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.. ++||+ +|
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~---~~ 109 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGW---AE 109 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTC---SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCC---CC
Confidence 357899999964 466889899999999999999999999999999999999999999999999876 49997 48
Q ss_pred cccCCCCeEEEEEEeCCCccceEEecchhhh----h-ccceeeEEEcCCCCCCCCCCC--CCCceeEEeeeeeccChHHH
Q 009358 106 CPIQTGQSYVYNFTISGQRGTLFWHAHISWL----R-ATVYGPLVIFPKRGVPYPFPK--PYKEVPIIFGEWFNADTEAI 178 (537)
Q Consensus 106 ~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~----~-~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~ 178 (537)
|+|+||++|+|+|++.+++||||||||.+++ . +||+|+|||+++.+...+++. .+.|++|+|+||++....++
T Consensus 110 ~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~ 189 (534)
T 3abg_A 110 DITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNL 189 (534)
T ss_dssp SCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCB
T ss_pred CCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCce
Confidence 9999999999999985568999999999764 3 799999999998765554433 25689999999987654432
Q ss_pred HHHhhcCCC-CCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcC-------CeEEEEEe
Q 009358 179 INQSLQTGA-GPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIAN-------HSVTVVDV 250 (537)
Q Consensus 179 ~~~~~~~g~-~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via~ 250 (537)
.. ..+. ....++.++|||+.++ .+++++ ++|||||||+|..+.+.|+|++ |+|+||++
T Consensus 190 ~~---~~~~~~~~~gd~~lvNG~~~p----------~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~ 255 (534)
T 3abg_A 190 VT---TNGELNSFWGDVIHVNGQPWP----------FKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIAS 255 (534)
T ss_dssp CC---CTTCSSCCCCSEEEETTEESC----------BCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEE
T ss_pred ec---cCCCCccccCceeccCCccCc----------eEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEe
Confidence 11 1111 1235789999999754 577888 5999999999999999999987 99999999
Q ss_pred cCCCc-CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeecc-CCCC-CCCCcceEEEEEEecCCCCCCCcccccCC
Q 009358 251 DAIYI-KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYA-TGQG-TFDNSTVAGILEYEAPAKFPRSSTVSIKK 327 (537)
Q Consensus 251 DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~-~~~~-~~~~~~~~ail~Y~~~~~~~~~~~~~~~~ 327 (537)
||.++ +|+.++++.|+|||||||+|++++.+ |.+|+|+..... .+.. ........+|++|..+.. + +..
T Consensus 256 DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~-~-----~~~- 327 (534)
T 3abg_A 256 DSGLLEHPADTSLLYISMAERYEVVFDFSDYA-GKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADD-T-----TQP- 327 (534)
T ss_dssp TTEEEEEEEEESCEEECTTCEEEEEEECSSCT-TSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCC-S-----SCS-
T ss_pred CCCcccCceEeceEEECCccEEEEEEEcCCCC-CceEEEEeccccccccccccCcCCcceeEEEecCCC-C-----cCC-
Confidence 99864 89999999999999999999999864 247999975421 1211 111234568999975542 0 000
Q ss_pred CCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeec
Q 009358 328 LPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFI 407 (537)
Q Consensus 328 ~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~ 407 (537)
.. ...|. .|+++. .+ ..+...++++.+ .. . + ..|+|||++|.
T Consensus 328 ~~---~~~P~------------~L~~~~---~p-~~~~~~~~~~~~--~~--------------~-~--~~w~iNG~~f~ 369 (534)
T 3abg_A 328 DT---SVVPA------------NLRDVP---FP-SPTTNTPRQFRF--GR--------------T-G--PTWTINGVAFA 369 (534)
T ss_dssp CC---CCCCC------------CCCCCS---CC-CCCCCCCEEEEC--SC--------------C-C--STTCCCCBTTB
T ss_pred CC---CCCcc------------ccccCC---CC-CCccccceEEEE--ec--------------c-C--ceeEECCcccC
Confidence 00 00111 122211 11 112223444332 11 0 1 24889999884
Q ss_pred CCChhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCC
Q 009358 408 LPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFN 487 (537)
Q Consensus 408 ~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~ 487 (537)
.+.. |+ ...++.|++++|+|+|.+ ..+.||||||||+
T Consensus 370 ~~~~----------------------p~-------------------l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~ 406 (534)
T 3abg_A 370 DVQN----------------------RL-------------------LANVPVGTVERWELINAG--NGWTHPIHIHLVD 406 (534)
T ss_dssp CTTS----------------------CC-------------------CCEECTTCEEEEEEEECS--SSCCCCEEESSCC
T ss_pred CCCC----------------------cc-------------------eeeccCCCEEEEEEEcCC--CCCCcCEEECCee
Confidence 3311 11 125678999999999954 2468999999999
Q ss_pred eeEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEE-ecCCCC
Q 009358 488 FFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFR-ADNPGD 537 (537)
Q Consensus 488 F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~-adNPG~ 537 (537)
||||++|.|.+. ....++++ .|||||.|++++|++|||+ |||||.
T Consensus 407 F~Vl~~~~g~~~----~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~ 452 (534)
T 3abg_A 407 FKVISRTSGNNA----RTVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGV 452 (534)
T ss_dssp EEEEEESSCCSS----SCCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEE
T ss_pred EEEEEEcCCCCc----CcCCcccc-CCcCeEEcCCCCEEEEEEEECCCCcc
Confidence 999999766432 12345666 8999999999999999999 999994
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2e-69 Score=579.61 Aligned_cols=404 Identities=18% Similarity=0.239 Sum_probs=292.8
Q ss_pred ccEEEEEEEEEEEEe--ecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCC----------------------Cce
Q 009358 28 ITRHYKFDIKMQNVT--RLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPN----------------------NIS 83 (537)
Q Consensus 28 ~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~----------------------~~s 83 (537)
...+|+|++++.... +++..+.+|+|||++|||+||+++||+|+|+|+|+|++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 345699999998765 45678999999999999999999999999999999975 899
Q ss_pred eEecCccccCCCCCCCCCc--ccccccCCCCeE---EEEEEeCCCccceEEecchhh----hh-ccceeeEEEcCCCCCC
Q 009358 84 IHWHGIRQLLSGWADGPAY--ITQCPIQTGQSY---VYNFTISGQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVP 153 (537)
Q Consensus 84 iH~HG~~~~~~~~~DGv~~--vtq~~i~PG~~~---~y~f~~~~~~Gt~wYH~h~~~----~~-~Gl~G~liV~~~~~~~ 153 (537)
|||||+++.. ++||+|+ ++||+|+||++| +|+|++.+++||||||||.++ |+ +||+|+|||+++.+..
T Consensus 104 iHwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 9999999874 5999995 799999999555 999997568999999999975 44 8999999999987655
Q ss_pred CCCCCCCCceeEEeeeeeccChHHHHHHhhc----------CCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEE
Q 009358 154 YPFPKPYKEVPIIFGEWFNADTEAIINQSLQ----------TGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTY 223 (537)
Q Consensus 154 ~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~----------~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~ 223 (537)
.+++..++|++|+|+||++....++...... .......++++||||+.+ +.+++++| +|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~ 250 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KY 250 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EE
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EE
Confidence 4454568899999999988765432111000 001123579999999975 36889885 89
Q ss_pred EEEEEecCCCCceeeEEcCC-eEEEEEecCCCc-CceEecEEEECCcceEEEEEEeCCCCCCce-EEEEEeeccCCCCCC
Q 009358 224 LLRLINAALNDELFFSIANH-SVTVVDVDAIYI-KSFQTDILLITPGQTTNILLKAKPSYPNAT-FLMSARPYATGQGTF 300 (537)
Q Consensus 224 rlRliN~~~~~~~~~~i~gh-~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~-y~i~~~~~~~~~~~~ 300 (537)
||||||+|..+.+.|+|+|| +|+|||+||.++ +|+.++++.|+|||||||+|++++.+ |+ +.++... .|....
T Consensus 251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~--g~~~~l~~~~--~~~~~~ 326 (513)
T 2wsd_A 251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYE--GESIILANSA--GCGGDV 326 (513)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGT--TCEEEEEECC--CSSSSC
T ss_pred EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCC--CcEEEEEecc--cccccC
Confidence 99999999999999999999 999999999998 89999999999999999999999865 65 3443332 221112
Q ss_pred CCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcC
Q 009358 301 DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTN 380 (537)
Q Consensus 301 ~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~ 380 (537)
......+||+|..+.. .. .+.. ...|.. |..+.. .+ ..+...++++.+...+..
T Consensus 327 ~~~~~~~il~~~~~~~-------~~--~~~~-~~~p~~------------l~~~~~--~~-~~~~~~~~~~~l~~~~~~- 380 (513)
T 2wsd_A 327 NPETDANIMQFRVTKP-------LA--QKDE-SRKPKY------------LASYPS--VQ-HERIQNIRTLKLAGTQDE- 380 (513)
T ss_dssp CTTTTTEEEEEECCSC-------CS--SCCC-CCCCSB------------CSCCGG--GC-CCCEEEEEEEEEEEEECT-
T ss_pred CCCCCcceEEEEeccC-------cc--cCcc-CCCCcc------------ccCCCC--cc-cCCCcceEEEEEEeecCC-
Confidence 2234568999976531 00 0000 111110 111000 00 011123455555443321
Q ss_pred CCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeC
Q 009358 381 PCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPF 460 (537)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~ 460 (537)
.+...|+|||++|..|. .+.++.
T Consensus 381 -------------~g~~~~~iNg~~~~~~~--------------------------------------------~~~~~~ 403 (513)
T 2wsd_A 381 -------------YGRPVLLLNNKRWHDPV--------------------------------------------TETPKV 403 (513)
T ss_dssp -------------TSCEEEEETTBCTTSCC--------------------------------------------CBCCBT
T ss_pred -------------CCCceEeECCccCCCcc--------------------------------------------cEecCC
Confidence 12335789998773220 124578
Q ss_pred CCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCC---CCCCCCCCCCCCCC---------CCCccceEEeCCCCEEEE
Q 009358 461 NASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFG---NYDPSKDRKNFNLI---------DPVERNTVGVPSGGWVAI 528 (537)
Q Consensus 461 g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G---~~~~~~~~~~~n~~---------~P~~RDTv~vp~~g~~vi 528 (537)
|++|+|+|+|.+ .+.||||||||+||||+++.+ .|+.. ..+|+. +|.|||||.|++++++.|
T Consensus 404 g~~~~w~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i 477 (513)
T 2wsd_A 404 GTTEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQES---GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRI 477 (513)
T ss_dssp TCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHH---CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEE
T ss_pred CCEEEEEEEcCC---CCCcCEeEeCceEEEEEecCccccccccc---ccccccCCCCCCCccccCcccEEEeCCCCEEEE
Confidence 999999999954 579999999999999998632 22211 012333 346999999999999999
Q ss_pred EEEe-cCCCC
Q 009358 529 RFRA-DNPGD 537 (537)
Q Consensus 529 Rf~a-dNPG~ 537 (537)
+|++ ||||.
T Consensus 478 ~~~f~dnpG~ 487 (513)
T 2wsd_A 478 AATFGPYSGR 487 (513)
T ss_dssp EEECCSCCEE
T ss_pred EEEecCCCCC
Confidence 9988 89984
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.1e-68 Score=562.46 Aligned_cols=393 Identities=22% Similarity=0.296 Sum_probs=287.6
Q ss_pred ccCccEEEEEEEEEEEEee-cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcc
Q 009358 25 VASITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (537)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~v 103 (537)
+.+.+++|+|++++..++. +|..+.+|+|||++|||+||+++||+|+|+|+|.|+++|+|||||+++. +++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc--
Confidence 5678899999999999986 6999999999999999999999999999999999999999999999985 4699986
Q ss_pred cccccCCCCeEEEEEEeCCC-ccceEEecchh----hhh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHH
Q 009358 104 TQCPIQTGQSYVYNFTISGQ-RGTLFWHAHIS----WLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEA 177 (537)
Q Consensus 104 tq~~i~PG~~~~y~f~~~~~-~Gt~wYH~h~~----~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 177 (537)
||+|+||++|+|+|+++++ +||||||||.+ .|+ +||+|+|||+++++...++ ++++ |+++||+++...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999998533 89999999973 455 8999999999987654433 3444 9999998865433
Q ss_pred HHH---HhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCC
Q 009358 178 IIN---QSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIY 254 (537)
Q Consensus 178 ~~~---~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 254 (537)
+.. .....| ..++.++|||+.+ +.++|++|+ ||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 197 ~~~~~~~~~~~g---~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~ 261 (481)
T 3zx1_A 197 IPNNNLNDWLNG---REGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGL 261 (481)
T ss_dssp CCCCCHHHHHHC---CCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEE
T ss_pred cccccchhhccC---CcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCc
Confidence 210 000112 2468999999964 479999998 9999999999999999999999999999877
Q ss_pred c-CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCC-CCcceEEEEEEecCCCCCCCcccccCCCCCCC
Q 009358 255 I-KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTF-DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMK 332 (537)
Q Consensus 255 v-~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~-~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~ 332 (537)
+ +|+.++++.|+|||||||+|++++. +.|.|.+.......... .......++++..... .
T Consensus 262 ~~~P~~~~~l~l~pgeR~dvlv~~~~~---~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~---- 323 (481)
T 3zx1_A 262 IEKTIYKEELFLSPASRVEVLIDAPKD---GNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-----------N---- 323 (481)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECSSC---EEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-----------C----
T ss_pred cCCceEeCeEEECCccEEEEEEEcCCC---cEEEEEEecccccCccccCCCCceeEEEEecCCC-----------C----
Confidence 6 8999999999999999999999875 88999886543311000 1122344444432111 0
Q ss_pred CCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCce-------eEeeecCee
Q 009358 333 PTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTK-------FAASVNNFS 405 (537)
Q Consensus 333 p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~iN~~~ 405 (537)
..+|. .|.++.. . ..+ ...+++.+........ ... . . +.. ..|+|||+.
T Consensus 324 ~~lP~------------~l~~~~~--~--~~~-~~~r~~~l~~~~~~~~----~~~-~-~-~~~~~~~~~~~~~~iNG~~ 379 (481)
T 3zx1_A 324 VELPK------------NLKIFKP--S--EEP-KEFKEIIMSEDHMQMH----GMM-G-K-SEGELKIALASMFLINRKS 379 (481)
T ss_dssp CCCCS------------CSCCCCC--C--CCC-CEEEEEEEEECCSTTT----TGG-G-C-CHHHHHHHHHTTEEETTBC
T ss_pred ccCCc------------cccCCCC--C--CCC-CcEEEEEEeccchhcc----ccc-c-c-ccccccccccceeEECCEe
Confidence 01111 0111100 0 111 1233444432211000 000 0 0 000 137888876
Q ss_pred ecCCChhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccC
Q 009358 406 FILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHG 485 (537)
Q Consensus 406 ~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHG 485 (537)
|-. ....+.++.|++|+|+|.|.+ .+.|||||||
T Consensus 380 ~~~-------------------------------------------~~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG 413 (481)
T 3zx1_A 380 YDL-------------------------------------------KRIDLSSKLGVVEDWIVINKS---HMDHPFHIHG 413 (481)
T ss_dssp CCT-------------------------------------------TCCCEEEETTCCEEEEEEECS---SSCEEEEETT
T ss_pred CCC-------------------------------------------CCceEEeCCCCEEEEEEEcCC---CCceeEEEec
Confidence 621 112357899999999999954 5899999999
Q ss_pred CCeeEEeec-CCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 486 FNFFVIGQG-FGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 486 h~F~Vl~~g-~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
|+|+|++++ .|. ......+.|||||.|+|+++++|+|++||||.
T Consensus 414 ~~F~vl~~~~~g~--------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~ 458 (481)
T 3zx1_A 414 TQFELISSKLNGK--------VQKAEFRALRDTINVRPNEELRLRMKQDFKGL 458 (481)
T ss_dssp CCEEEEEEEETTE--------EEECSSCCEESEEEECTTCEEEEEECCCSCEE
T ss_pred cEEEEEEecccCC--------CCCcccCcccceEEECCCCEEEEEEEcCCCee
Confidence 999999984 231 11234678999999999999999999999994
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.3e-69 Score=568.82 Aligned_cols=370 Identities=18% Similarity=0.288 Sum_probs=280.4
Q ss_pred cEEEEEEEEEEEEeecCeeeEEEEEcCc-CCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccc
Q 009358 29 TRHYKFDIKMQNVTRLCHTKSIITVNGQ-FPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCP 107 (537)
Q Consensus 29 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~-~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~ 107 (537)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++.. ++||+|+ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 56788887 899999 9999999999999999999999999999999999864 5999997 99
Q ss_pred cCCCCeEEEEEEeCCCccceEEecc----hhhhh-ccceeeEEEcCCCCCCCCCCCCC-CceeEEeeeeeccChHHHHH-
Q 009358 108 IQTGQSYVYNFTISGQRGTLFWHAH----ISWLR-ATVYGPLVIFPKRGVPYPFPKPY-KEVPIIFGEWFNADTEAIIN- 180 (537)
Q Consensus 108 i~PG~~~~y~f~~~~~~Gt~wYH~h----~~~~~-~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~l~d~~~~~~~~~~~- 180 (537)
|+||++|+|+|++++++|||||||| ...|+ +||+|+|||+++++. .+++ +| +|++|+++||++.. .++..
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~ 157 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYN 157 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Cccccc
Confidence 9999999999998558999999999 56676 899999999998764 3232 35 89999999999876 43211
Q ss_pred ---HhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEE--cC---CeEEEEEecC
Q 009358 181 ---QSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI--AN---HSVTVVDVDA 252 (537)
Q Consensus 181 ---~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG 252 (537)
..... ...+++++|||+.. +.++|++| +|||||||+|..+.+.|+| +| |+|+||++||
T Consensus 158 ~~~~~~~~---~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG 223 (448)
T 3aw5_A 158 PTPMEMIA---GFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQ 223 (448)
T ss_dssp CCHHHHHH---CCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETT
T ss_pred cccccccc---CccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCC
Confidence 00011 13568999999964 47999999 9999999999999999999 99 9999999999
Q ss_pred CCcC-ceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCC----------CCCcceEEEEEEecCCCCCCCc
Q 009358 253 IYIK-SFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGT----------FDNSTVAGILEYEAPAKFPRSS 321 (537)
Q Consensus 253 ~~v~-P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~----------~~~~~~~ail~Y~~~~~~~~~~ 321 (537)
.+++ |+.++++.|+|||||||+|+++ . +.|+|++.....+.+. .......++++|.++..
T Consensus 224 ~~~~~P~~~~~l~l~pgeR~dvlv~~~-~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 294 (448)
T 3aw5_A 224 GFLARPIEVRALFLAPAERAEVVVELG-E---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGE----- 294 (448)
T ss_dssp EEEEEEEEESCEEECTTCEEEEEEEEC-S---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECC-----
T ss_pred CccCCceEeceEEECCcceEEEEEECC-C---CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCC-----
Confidence 9997 9999999999999999999998 2 7999999865543210 11134577888875542
Q ss_pred ccccCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeee
Q 009358 322 TVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASV 401 (537)
Q Consensus 322 ~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 401 (537)
. +. |. .|..+... ..+...++++.+..+ . ..|+|
T Consensus 295 --~--------~~-p~------------~L~~lp~~----~~~~~~~~~~~l~~~-----------------~--~~~~i 328 (448)
T 3aw5_A 295 --A--------VP-VE------------ALSDPPPE----PPKPTRTRRFALSLS-----------------G--MQWTI 328 (448)
T ss_dssp --C--------CC-CC------------CCSCCCCC----CCCCSEEEEEEEEEE-----------------T--TEEEE
T ss_pred --C--------CC-cc------------ccCCCCCC----CCCCCceEEEEEeCC-----------------C--ceeeE
Confidence 0 10 10 01111100 122234555555431 1 24899
Q ss_pred cCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEE-eeCCCEEEEEEeeCCCCCCCCCC
Q 009358 402 NNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVV-LPFNASVELVMQDTSTLGAESHP 480 (537)
Q Consensus 402 N~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-v~~g~~veivi~N~~~~~~~~HP 480 (537)
||++|..+. | .+. ++.|++|+|+|+|.+ ..+.||
T Consensus 329 Ng~~~~~~~-----------------------p--------------------~~~~~~~g~~v~~~i~N~~--~~~~HP 363 (448)
T 3aw5_A 329 NGMFWNASN-----------------------P--------------------LFEHVSVEGVELWEIVNDK--ASMPHP 363 (448)
T ss_dssp TTBCCCTTC-----------------------T--------------------TCCCEEECEEEEEEEEECS--SSCCEE
T ss_pred CCCcCCCCC-----------------------C--------------------ceeccCCCCeEEEEEEcCC--CCCCcC
Confidence 999884221 1 123 678999999999954 157999
Q ss_pred ccccCCCeeEEeecCCCCCCCCCCCCC----CCCCCCccceEEeCCCCEEEEE--EE---ecCC
Q 009358 481 LHLHGFNFFVIGQGFGNYDPSKDRKNF----NLIDPVERNTVGVPSGGWVAIR--FR---ADNP 535 (537)
Q Consensus 481 ~HLHGh~F~Vl~~g~G~~~~~~~~~~~----n~~~P~~RDTv~vp~~g~~viR--f~---adNP 535 (537)
||||||+||||+++ |.+....+...+ +..+|.|||||.|+++||++|+ |+ ||||
T Consensus 364 ~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp 426 (448)
T 3aw5_A 364 MHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL 426 (448)
T ss_dssp EEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE
T ss_pred EEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc
Confidence 99999999999984 544311111122 3345679999999999999665 99 9997
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=7e-67 Score=575.20 Aligned_cols=437 Identities=17% Similarity=0.225 Sum_probs=279.2
Q ss_pred CccEEEEEEEEEEEEe--ecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCC-----------------------
Q 009358 27 SITRHYKFDIKMQNVT--RLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN----------------------- 81 (537)
Q Consensus 27 ~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~----------------------- 81 (537)
...++|+|++++.... +++....+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 4567899999887655 466678899999999999999999999999999999654
Q ss_pred ------------------ceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhh----hh-c
Q 009358 82 ------------------ISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW----LR-A 138 (537)
Q Consensus 82 ------------------~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~----~~-~ 138 (537)
|+|||||+++.. ++||++ ||+|+||++|+|+|++.+++||||||||.++ |+ +
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678888988754 588874 9999999999999998666899999999743 55 8
Q ss_pred cceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHHHHHhh--------c-----CC---CCCCCCCcEEEcCccC
Q 009358 139 TVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQSL--------Q-----TG---AGPNVSDAYTINGLPG 202 (537)
Q Consensus 139 Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~--------~-----~g---~~~~~~~~~liNG~~~ 202 (537)
||+|+|||+++.+..++++..++|++|+|+||++....+...... . .+ .....++.++|||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 999999999987666666667899999999998754432211000 0 00 0123468899999975
Q ss_pred CCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCC-------eEEEEEecCCCc-CceEe------cEEEECCc
Q 009358 203 PLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH-------SVTVVDVDAIYI-KSFQT------DILLITPG 268 (537)
Q Consensus 203 ~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~------d~v~l~pG 268 (537)
+.+.++. ++|||||||+|..+.+.|+|++| +|+|||+||.++ +|+.+ ++|.|+||
T Consensus 265 ----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pG 333 (612)
T 3gyr_A 265 ----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccc
Confidence 3567765 58999999999999999999998 499999999988 56554 58999999
Q ss_pred ceEEEEEEeCCCCCCceEE-EEEeeccCCCC---CCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccc
Q 009358 269 QTTNILLKAKPSYPNATFL-MSARPYATGQG---TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFA 344 (537)
Q Consensus 269 eR~dv~v~~~~~~~~g~y~-i~~~~~~~~~~---~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 344 (537)
|||||+|++++.. |.++ +.......+.. ........++++|..... ...... ..|......
T Consensus 334 eRydVlV~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~----~~p~~~~~~-- 398 (612)
T 3gyr_A 334 ERFDLLVDFRALG--GRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRET-------CEEDSF----ALPEVLSGS-- 398 (612)
T ss_dssp CEEEEEEECTTCT--TCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECC-------SCCCCC----CCCSSCCSS--
T ss_pred eEEEEEEECCCCC--ceEEEEEecCCcCCcCccCccccccccceeeecccCC-------CCCCcc----ccccccccc--
Confidence 9999999999875 5444 44332222111 112334567777765442 000000 111100000
Q ss_pred cccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCee----ecCCChhhHHhhhcC
Q 009358 345 FNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFS----FILPSTALLQAHFFG 420 (537)
Q Consensus 345 ~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~----~~~p~~pll~~~~~~ 420 (537)
.... ....+. ......+.. .... ... .....+.++... +..+....+
T Consensus 399 ------~~~~-----~~~~~~-~~~~~~~~~-~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------ 449 (612)
T 3gyr_A 399 ------FRRM-----SHDIPH-GHRLIVLTP-PGTK---------GSG-GHPEIWEMAEVEDPADVQVPAEGVI------ 449 (612)
T ss_dssp ------CCCC-----CTTSCC-EEEEEEEEC-TTCT---------TTT-TCCEEEEEEECC-----CCSCTTEE------
T ss_pred ------cccc-----cccccc-ccccccccc-cccc---------ccc-cccccccccccccccccccccccee------
Confidence 0000 000000 000000000 0000 000 000011111100 000000000
Q ss_pred CCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCC
Q 009358 421 QNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDP 500 (537)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~ 500 (537)
.....+..+..+...+. ...+...+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.+..
T Consensus 450 -----~~~~~~~~~~~~~~n~~------~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~ 515 (612)
T 3gyr_A 450 -----QVTGADGRTKTYRRTAR------TFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASG 515 (612)
T ss_dssp -----EEECTTSCEEEEEEEEC------STTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTT
T ss_pred -----eeccCCCccccccccCc------cCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcc
Confidence 00000000001100000 011234578899999999999954 5899999999999999986332221
Q ss_pred C---C------------CCCCCCCCCCCccceEEeCCCCEEEEEEE-ecCCCC
Q 009358 501 S---K------------DRKNFNLIDPVERNTVGVPSGGWVAIRFR-ADNPGD 537 (537)
Q Consensus 501 ~---~------------~~~~~n~~~P~~RDTv~vp~~g~~viRf~-adNPG~ 537 (537)
. . .....+..++.|||||.||++||++|||+ +||||+
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~ 568 (612)
T 3gyr_A 516 FDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGR 568 (612)
T ss_dssp EETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEE
T ss_pred ccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcc
Confidence 1 0 01235677889999999999999999998 999994
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.5e-65 Score=540.42 Aligned_cols=407 Identities=19% Similarity=0.250 Sum_probs=283.6
Q ss_pred CccEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCccccc
Q 009358 27 SITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (537)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~ 106 (537)
...++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.. ++||+| ||
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p---~~ 89 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP---QG 89 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT---TC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC---cC
Confidence 3467899999999999999999999999999999999999999999999999999999999999875 499986 89
Q ss_pred ccCCCCeEEEEEEeCCCccceEEecchh----hhh-ccceeeEEEcCCCCCCCCCCC--CCCceeEEeeeeeccChHHHH
Q 009358 107 PIQTGQSYVYNFTISGQRGTLFWHAHIS----WLR-ATVYGPLVIFPKRGVPYPFPK--PYKEVPIIFGEWFNADTEAII 179 (537)
Q Consensus 107 ~i~PG~~~~y~f~~~~~~Gt~wYH~h~~----~~~-~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~~ 179 (537)
+|+||++|+|+|++.+++||||||||.+ .|. +||+|+|||+++.+...+++. ...|++|+++||+++...++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 9999999999999855589999999984 354 899999999987654333322 246899999999986543221
Q ss_pred HH-hhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEE-cCCeEEEEEecCCCc-C
Q 009358 180 NQ-SLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI-ANHSVTVVDVDAIYI-K 256 (537)
Q Consensus 180 ~~-~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~ 256 (537)
.. ..........++.++|||+.+| .+.+ +|++|||||||+|..+.+.|+| +||+|+|||+||.++ +
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~p----------~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~ 238 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIYP----------QHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPE 238 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSSC----------EEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEE
T ss_pred ccccccccccCCCCCEEEEcCCcCc----------cEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccC
Confidence 00 0000001134689999999753 3444 6789999999999999999999 699999999999987 8
Q ss_pred ceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCC-CCcceEEEEEEecCCCCCCCcccccCCCCCCCCCC
Q 009358 257 SFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTF-DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTL 335 (537)
Q Consensus 257 P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~-~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~ 335 (537)
|+.+++|.|+|||||||+|++++. +.|.+++.......... .......+++...... . .. ..+
T Consensus 239 P~~~~~l~l~pGeR~dvlv~~~~~---~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~-~~----~~~ 302 (488)
T 3od3_A 239 PVKVSELPVLMGERFEVLVEVNDN---KPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAI--------S-AS----GAL 302 (488)
T ss_dssp EEEESCEEECTTCEEEEEEEECTT---CCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEE--------E-CC----CCC
T ss_pred ccEeceEEECCCCEEEEEEEeCCC---ceEEEEEeccCCCCcccccccCccceeEeccccc--------C-CC----CCC
Confidence 999999999999999999999974 78999876533211100 1112233444332110 0 00 001
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEecc----------------CcCCC---------CCCCCcc-
Q 009358 336 PALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGL----------------GTNPC---------PKNQTCQ- 389 (537)
Q Consensus 336 p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~----------------~~~~~---------~~~~~~~- 389 (537)
|. .|..+.. .+ ......++++.+.+.. ..... ..+....
T Consensus 303 P~------------~L~~~~~--~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 367 (488)
T 3od3_A 303 PD------------TLSSLPA--LP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNH 367 (488)
T ss_dssp CS------------CCCCCCC--CC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCC
T ss_pred Cc------------ccccCCC--Cc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccc
Confidence 11 0111100 00 0111234555554310 00000 0000000
Q ss_pred CCCCCcee----EeeecCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEE
Q 009358 390 GPNNSTKF----AASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVE 465 (537)
Q Consensus 390 ~~~~~~~~----~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve 465 (537)
... +..+ .|+|||+.|-.. .....++.|++++
T Consensus 368 ~~~-g~~~~~~~~~~ING~~~~~~-------------------------------------------~~~~~~~~G~~e~ 403 (488)
T 3od3_A 368 MNH-GGKFDFHHANKINGQAFDMN-------------------------------------------KPMFAAAKGQYER 403 (488)
T ss_dssp SCC-CGGGCGGGCEEETTBCCCTT-------------------------------------------CCSEECCBSSCEE
T ss_pred ccc-cccccccceeeECCeeCCCC-------------------------------------------CCceEcCCCCEEE
Confidence 000 1111 368999876211 1125678999999
Q ss_pred EEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCC
Q 009358 466 LVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPG 536 (537)
Q Consensus 466 ivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG 536 (537)
|.|.|.+. .+.||||||||+|+||+++ | ......++.|||||.|+ ++++.|+|++|+|+
T Consensus 404 w~l~N~~~--~~~Hp~HlHg~~F~Vl~~~-g--------~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~ 462 (488)
T 3od3_A 404 WVISGVGD--MMLHPFHIHGTQFRILSEN-G--------KPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDA 462 (488)
T ss_dssp EEEECTTC--CCCEEEEETTCCBEEEEBT-T--------BCCCGGGSSSBSEEEES-SSEEEEEECBCSCC
T ss_pred EEEEeCCC--CCCccEEEcCceEEEeccC-C--------CccccccCCceeEEEeC-CCEEEEEEEeccCC
Confidence 99999642 4789999999999999984 2 11223356799999999 99999999987654
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=4.2e-64 Score=542.33 Aligned_cols=432 Identities=18% Similarity=0.227 Sum_probs=290.9
Q ss_pred cCccEEEEEEEEEEEEe--ecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCC----------------------
Q 009358 26 ASITRHYKFDIKMQNVT--RLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNN---------------------- 81 (537)
Q Consensus 26 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~---------------------- 81 (537)
....++|+|++++.... +++..+.+|+|||++|||+|++++||+|+|+++|+|++.
T Consensus 29 ~~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~ 108 (612)
T 2g23_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccc
Confidence 34578999999998776 445689999999999999999999999999999999753
Q ss_pred -------------------ceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhh----hh-
Q 009358 82 -------------------ISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW----LR- 137 (537)
Q Consensus 82 -------------------~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~----~~- 137 (537)
++|||||+++... +||++ ||+|+||++|+|+|++.+++||||||||.++ |.
T Consensus 109 ~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~ 183 (612)
T 2g23_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTT
T ss_pred ccccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhh
Confidence 8999999998765 89985 8999999999999998567999999999976 55
Q ss_pred ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHH-HH-Hh------hc----CCCC----CCCCCcEEEcCcc
Q 009358 138 ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAI-IN-QS------LQ----TGAG----PNVSDAYTINGLP 201 (537)
Q Consensus 138 ~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~-~~-~~------~~----~g~~----~~~~~~~liNG~~ 201 (537)
+||+|+|||+++.+...+++.+|+|++|+|+||++....+. +. .. .. .++. +..++.+||||+.
T Consensus 184 ~GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~ 263 (612)
T 2g23_A 184 AGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred ccceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCcc
Confidence 89999999999876555555678999999999998643210 00 00 00 1111 1357999999997
Q ss_pred CCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCC-------eEEEEEecCCCc-CceEec------EEEECC
Q 009358 202 GPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH-------SVTVVDVDAIYI-KSFQTD------ILLITP 267 (537)
Q Consensus 202 ~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v-~P~~~d------~v~l~p 267 (537)
+ +.++|++| +|||||||+|..+.+.|+|++| +|+|||+||.++ +|+.++ +|.|+|
T Consensus 264 ~----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~p 332 (612)
T 2g23_A 264 W----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAP 332 (612)
T ss_dssp S----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECT
T ss_pred C----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECC
Confidence 5 47999999 9999999999999999999999 899999999999 699999 999999
Q ss_pred cceEEEEEEeCCCCCCceEEEEEeeccCCCCCC---CCcceEEEEEEecCCCCCCCcccccCCCCCCCCC-CC----CCC
Q 009358 268 GQTTNILLKAKPSYPNATFLMSARPYATGQGTF---DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPT-LP----ALN 339 (537)
Q Consensus 268 GeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~---~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~-~p----~~~ 339 (537)
||||||+|++++.+ |.+|+|+........+.. .......|+++..... . .. ....+ |. +. ...
T Consensus 333 geR~dvlVd~~~~~-g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~--~----~~-~~~~~-P~~L~~~~~~l~ 403 (612)
T 2g23_A 333 AERFDLLVDFRALG-GRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRET--C----EE-DSFAL-PEVLSGSFRRMS 403 (612)
T ss_dssp TCEEEEEEECTTCT-TCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECC--S----CC-CCCCC-CSSCCSSCCCCC
T ss_pred cCeEEEEEECCCCC-CCEEEEEeCCccCCCCccccccCccccceEEEEEccC--C----CC-CCCCC-ChhhccccccCC
Confidence 99999999999875 468988876421111100 0111234666654321 0 00 00001 11 00 000
Q ss_pred -CcccccccccccccccCCCCCCCC-CCCcceEEEEEeccCcC--CCCCCCC--ccCCCCCceeEeeecCeeecCCChhh
Q 009358 340 -DTAFAFNYTTRLRSLANAQFPANV-PQTVNKRFFFTVGLGTN--PCPKNQT--CQGPNNSTKFAASVNNFSFILPSTAL 413 (537)
Q Consensus 340 -~~~~~~~~~~~l~~l~~~~~p~~~-p~~~d~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~iN~~~~~~p~~pl 413 (537)
+...... ...+. . +... .......+.++-..... ..+.... ....+ |....|++||+.|.
T Consensus 404 ~~~~~~~r----~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~iNG~~~~------ 469 (612)
T 2g23_A 404 HDIPHGHR----LIVLT-P--PGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGAD-GRTKTYRRTAATFN------ 469 (612)
T ss_dssp TTSCCEEE----EEEEC-C--TTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTT-SCEEEEEEEECSTT------
T ss_pred ccccccee----EEeec-c--ccccccccccceeeccccccccccccccccceeeeccC-CceeEEEECCccCC------
Confidence 0000000 00000 0 0000 00000011111000000 0000000 00011 33334567766541
Q ss_pred HHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEee
Q 009358 414 LQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQ 493 (537)
Q Consensus 414 l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~ 493 (537)
....+.++.|++|+|.|.|.+ .+.||||||||.|+||++
T Consensus 470 --------------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r 508 (612)
T 2g23_A 470 --------------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGR 508 (612)
T ss_dssp --------------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEE
T ss_pred --------------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecc
Confidence 112467899999999999964 589999999999999998
Q ss_pred cCCCC---CCCCCC------------CCCCCCCCCccceEEeCCCCEEEEEEEec-CCCC
Q 009358 494 GFGNY---DPSKDR------------KNFNLIDPVERNTVGVPSGGWVAIRFRAD-NPGD 537 (537)
Q Consensus 494 g~G~~---~~~~~~------------~~~n~~~P~~RDTv~vp~~g~~viRf~ad-NPG~ 537 (537)
+.+.+ +...++ ...+..++.|||||.|+++++++|+|++| |||.
T Consensus 509 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~ 568 (612)
T 2g23_A 509 DAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGR 568 (612)
T ss_dssp EEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEE
T ss_pred cCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCcc
Confidence 53221 111000 23455667899999999999999999999 9984
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=2.6e-55 Score=441.80 Aligned_cols=271 Identities=25% Similarity=0.408 Sum_probs=228.1
Q ss_pred ccEEEEEEEEEEEEee-cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCccccc
Q 009358 28 ITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (537)
Q Consensus 28 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~ 106 (537)
++|+|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++..+.++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999887 588899999999999999999999999999999999999999999999888889999999999
Q ss_pred ccCCCCeEEEEEEeCCCccceEEecchhhhh----ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHHHHHh
Q 009358 107 PIQTGQSYVYNFTISGQRGTLFWHAHISWLR----ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQS 182 (537)
Q Consensus 107 ~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~----~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 182 (537)
+|+||++++|+|++ +++||||||||.+.++ +||+|+|||++++..+.+. ..|+|++|+++||++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----c
Confidence 99999999999998 7999999999997654 6999999999876432211 34889999999998754321 1
Q ss_pred hcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCc-CceEec
Q 009358 183 LQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI-KSFQTD 261 (537)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~d 261 (537)
...+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.||||||+|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~-------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPE-------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTS-------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCCC-------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 1112122346899999997642 2458999999999999999976 567999999999999999998 799999
Q ss_pred EEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCC-CCCcceEEEEEEecCC
Q 009358 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGT-FDNSTVAGILEYEAPA 315 (537)
Q Consensus 262 ~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~-~~~~~~~ail~Y~~~~ 315 (537)
++.|+||||++|+++++++ |.|+++||........ .-.....++|+|++.+
T Consensus 227 tv~l~pger~~v~~~a~~p---G~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMDNP---GLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECCSC---SEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECCCC---eeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999999999987 9999999976543210 0123568999998755
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=5.2e-54 Score=436.93 Aligned_cols=271 Identities=27% Similarity=0.477 Sum_probs=226.5
Q ss_pred ccEEEEEEEEEEEEeec-CeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCccccc
Q 009358 28 ITRHYKFDIKMQNVTRL-CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQC 106 (537)
Q Consensus 28 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~ 106 (537)
++++|+|++++..++++ |..+.+|+|||++|||+|+|++||+|+|+|+|.+..+++|||||+++..++|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999998885 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEeCCCccceEEecchhh--hh--ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHHHHHh
Q 009358 107 PIQTGQSYVYNFTISGQRGTLFWHAHISW--LR--ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQS 182 (537)
Q Consensus 107 ~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~--~~--~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 182 (537)
+|+||++|+|+|++ +++||||||||... +. +||+|+|||+++.+...+. ..|+|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheecccccc----c
Confidence 99999999999998 78999999999876 33 7999999999875432111 34789999999998632110 0
Q ss_pred hcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC-ceEec
Q 009358 183 LQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK-SFQTD 261 (537)
Q Consensus 183 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~-P~~~d 261 (537)
...+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.||||||+|+||+.||.+++ |..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~~-------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFPL-------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTTS-------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCCC-------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 0011111246889999997542 3458999999999999999954 7789999999999999999984 89999
Q ss_pred EEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCC-CCCcceEEEEEEecCC
Q 009358 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGT-FDNSTVAGILEYEAPA 315 (537)
Q Consensus 262 ~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~-~~~~~~~ail~Y~~~~ 315 (537)
++.|+||||++|+|+++++ |.|+++|+....+... .......++|+|++..
T Consensus 228 tv~l~pg~r~~v~~~~~~p---G~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEADNP---GRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECCSC---SEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeCCC---eeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999999999987 9999999976542211 1224568999998654
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1e-50 Score=466.75 Aligned_cols=270 Identities=17% Similarity=0.248 Sum_probs=208.6
Q ss_pred ccccCccEEEEEEEEEEEEeec--Ce--------------------------eeEEE-------EEcCc--------CCC
Q 009358 23 LAVASITRHYKFDIKMQNVTRL--CH--------------------------TKSII-------TVNGQ--------FPG 59 (537)
Q Consensus 23 ~~~~~~~~~~~l~~~~~~~~~~--g~--------------------------~~~~~-------~~NG~--------~Pg 59 (537)
..+.+++|+|.|.|++..++.. |. .+.++ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 4455789999999999987643 22 22333 47877 999
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCcccc----CCCCCCCCCc--ccccccCCCCeEEEEEEeCCC---------c
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQL----LSGWADGPAY--ITQCPIQTGQSYVYNFTISGQ---------R 124 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~~--vtq~~i~PG~~~~y~f~~~~~---------~ 124 (537)
|+||+++||+|+|+|+|.|+++++|||||+++. +.+|+||+++ +|||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999987 4578888898 899999999999999998544 4
Q ss_pred cceEEecchhhhh---ccceeeEEEcCCCCCCCCCC-CCCCceeEEee------eeeccChHHHHH-H-hhcCCCC---C
Q 009358 125 GTLFWHAHISWLR---ATVYGPLVIFPKRGVPYPFP-KPYKEVPIIFG------EWFNADTEAIIN-Q-SLQTGAG---P 189 (537)
Q Consensus 125 Gt~wYH~h~~~~~---~Gl~G~liV~~~~~~~~~~~-~~d~e~~l~l~------d~~~~~~~~~~~-~-~~~~g~~---~ 189 (537)
||||||||.+.++ +||+|+|||++++....|.+ ..|+|++|+++ ||++......+. . ....... .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~ 254 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQ 254 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCcccccccccccc
Confidence 9999999999875 89999999999875443322 35789999999 565543221110 0 0000000 0
Q ss_pred CCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCC-CceeeEEcCCeEEEEEecCCCcCceEecEEEECCc
Q 009358 190 NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPG 268 (537)
Q Consensus 190 ~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pG 268 (537)
...+.++|||+.+. ..+.+++++|++|||||+|+|.. ..+.||||||+|+ ++|+.+|++.|+||
T Consensus 255 ~~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pG 319 (1065)
T 2j5w_A 255 QSNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPA 319 (1065)
T ss_dssp HHTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBT
T ss_pred ccCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCC
Confidence 02357899999641 24678999999999999999976 5788999999999 36889999999999
Q ss_pred ceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCC
Q 009358 269 QTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (537)
Q Consensus 269 eR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~ 315 (537)
||+||+|+++++ |.|+|+|+...... ....++++|.+..
T Consensus 320 er~dVlv~~~~p---G~y~i~~h~~~h~~-----~Gm~~~~~V~~~~ 358 (1065)
T 2j5w_A 320 TLFDAYMVAQNP---GEWMLSCQNLNHLK-----AGLQAFFQVQECN 358 (1065)
T ss_dssp CEEEEEEECCSC---EEEEEEECSHHHHH-----TTCEEEEEEECSC
T ss_pred cEEEEEEEeCCC---eeEEEEecCcchhh-----CCCEEEEEEecCC
Confidence 999999999996 99999999764321 3568888887654
No 21
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=6.4e-50 Score=404.83 Aligned_cols=263 Identities=19% Similarity=0.271 Sum_probs=220.9
Q ss_pred cccCccEEEEEEEEEEEEee-cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC--CCceeEecCccccCCCCCCCC
Q 009358 24 AVASITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP--NNISIHWHGIRQLLSGWADGP 100 (537)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv 100 (537)
.+.+++++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.+. .+++|||||+.+ +||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCC
Confidence 35678899999999999988 799999999999999999999999999999999986 589999999852 6888
Q ss_pred CcccccccCCCCeEEEEEEeCCCccceEEecchh---hhh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChH
Q 009358 101 AYITQCPIQTGQSYVYNFTISGQRGTLFWHAHIS---WLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTE 176 (537)
Q Consensus 101 ~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~---~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~ 176 (537)
+..+ .|.||++++|+|++ +++||||||||.+ .+. +||+|+|||++++.. +..|+|++++++||++....
T Consensus 108 ~~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~----p~~d~e~~l~~~d~~~~~~~ 180 (327)
T 1kbv_A 108 AAAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYIVQGDFYTKGKK 180 (327)
T ss_dssp TTTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCT
T ss_pred Ccce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC----CCCceEEEEEeeeeeccCcc
Confidence 7644 49999999999998 7899999999974 344 899999999987532 24588999999999987521
Q ss_pred HH-------HHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEE
Q 009358 177 AI-------INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVD 249 (537)
Q Consensus 177 ~~-------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 249 (537)
.. .... .+ ..++.++|||+.+++.. .+.+++++|++|||||+|++....+.|||+||+|+||+
T Consensus 181 ~~~g~~~~~~~~~--~~---~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~ 250 (327)
T 1kbv_A 181 GAQGLQPFDMDKA--VA---EQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVY 250 (327)
T ss_dssp TCCEEECBCHHHH--HH---TCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEE
T ss_pred ccccccccChhHh--cc---CCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEE
Confidence 00 0000 01 24589999999875432 25799999999999999999888899999999999999
Q ss_pred ecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCC
Q 009358 250 VDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (537)
Q Consensus 250 ~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~ 315 (537)
.||.+++|..++++.|+||||+||+|+++++ |.|+|+|+....+ ......|+|+|++..
T Consensus 251 ~DG~~~~p~~~d~l~l~pGer~dv~v~~~~p---G~y~l~~h~~~~~----~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 251 VEGGKLINENVQSTIVPAGGSAIVEFKVDIP---GNYTLVDHSIFRA----FNKGALGQLKVEGAE 309 (327)
T ss_dssp GGGSSCEECSBSEEEECTTEEEEEEEEECSC---EEEEEEESSTHHH----HHSSCEEEEEEESCC
T ss_pred cCCCcCCCCceeEEEECCCCEEEEEEEeCCC---eEEEEEecccccc----ccCCcEEEEEECCCC
Confidence 9999999999999999999999999999986 9999999975542 113569999998765
No 22
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=8.3e-49 Score=389.68 Aligned_cols=238 Identities=26% Similarity=0.367 Sum_probs=206.8
Q ss_pred ccCccEEEEEEEEEEEEeec-CeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcc
Q 009358 25 VASITRHYKFDIKMQNVTRL-CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (537)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~v 103 (537)
....+++|+|++++..+... |..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||++. .++||+|++
T Consensus 30 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~ 106 (288)
T 3gdc_A 30 DGRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGI 106 (288)
T ss_dssp TSCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTS
T ss_pred CCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCc
Confidence 34567999999999887764 99999999999999999999999999999999999999999999973 469999999
Q ss_pred cccccCCCCeEEEEEEeCCCccceEEecchhh---hh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHHH
Q 009358 104 TQCPIQTGQSYVYNFTISGQRGTLFWHAHISW---LR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAII 179 (537)
Q Consensus 104 tq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~ 179 (537)
+||+|+||++++|+|++ +++||||||||... +. +||+|+|||++++..+ ..|+|++|+++||+..+
T Consensus 107 ~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~----- 176 (288)
T 3gdc_A 107 GAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG----- 176 (288)
T ss_dssp TTCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-----
T ss_pred cceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-----
Confidence 99999999999999998 89999999999974 44 8999999999986532 24789999999998752
Q ss_pred HHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCC-ceeeEEcCCeEEEEEecCCCc-Cc
Q 009358 180 NQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHSVTVVDVDAIYI-KS 257 (537)
Q Consensus 180 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v-~P 257 (537)
+ ..++.++|||+.+++ ....++++.|++|||||+|++... .+.||||||.|+|++ +|..+ .|
T Consensus 177 ------g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~ 240 (288)
T 3gdc_A 177 ------G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPS 240 (288)
T ss_dssp ------T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCS
T ss_pred ------C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCC
Confidence 1 135799999997531 124689999999999999999654 578999999999998 55555 67
Q ss_pred eEecEEEECCcceEEEEEEeCCCCCCceEEEEEeecc
Q 009358 258 FQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYA 294 (537)
Q Consensus 258 ~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~ 294 (537)
...|++.|.||||++|+++++++ |.|+++||...
T Consensus 241 ~~~Dtv~v~pg~~~~v~~~~~~p---G~~~~hCH~~~ 274 (288)
T 3gdc_A 241 EYTDTISQVQGQRGILELRFPYP---GKFMFHAHKTE 274 (288)
T ss_dssp EEESEEEEETTCEEEEEECCCSC---EEEEEECSSHH
T ss_pred ceeeEEEeCCCceEEEEEECCCC---EEEEEEecChH
Confidence 89999999999999999999987 99999999754
No 23
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=9.2e-46 Score=390.72 Aligned_cols=268 Identities=20% Similarity=0.237 Sum_probs=222.4
Q ss_pred cccccCccEEEEEEEEEEEEe-ecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC--CCceeEecCccccCCCCCC
Q 009358 22 GLAVASITRHYKFDIKMQNVT-RLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP--NNISIHWHGIRQLLSGWAD 98 (537)
Q Consensus 22 ~~~~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~D 98 (537)
...+.+.+++|+|++++..++ ++|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +|
T Consensus 21 ~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~d 95 (442)
T 2zoo_A 21 INRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PG 95 (442)
T ss_dssp CCCSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GG
T ss_pred cccCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CC
Confidence 344677899999999999988 4899999999999999999999999999999999985 599999999874 68
Q ss_pred CCCcccccccCCCCeEEEEEEeCCCccceEEecch---hhhh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccC
Q 009358 99 GPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI---SWLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNAD 174 (537)
Q Consensus 99 Gv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~---~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~ 174 (537)
|++..+ +|+||++++|+|++ +++||||||||. ..+. +||+|+|||++++.. +.+|+|++|+++||++..
T Consensus 96 G~~~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~ 168 (442)
T 2zoo_A 96 GGAESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKG 168 (442)
T ss_dssp GGGGGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSS
T ss_pred CCCccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccC
Confidence 887654 69999999999997 889999999974 3455 899999999987532 245899999999999865
Q ss_pred hHHH-----HHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEE
Q 009358 175 TEAI-----INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVD 249 (537)
Q Consensus 175 ~~~~-----~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 249 (537)
.... ....... ..++++++|||+.++.. ..+.+++++|++|||||+|+|....+.|||+||+|+||+
T Consensus 169 ~~~~~~~~~~~~~~~~---~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~ 240 (442)
T 2zoo_A 169 EFGEAGLQPFDMAKAI---DEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVY 240 (442)
T ss_dssp CTTCCEEECBCHHHHH---TTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEE
T ss_pred cccccccccCChhHhc---cCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEe
Confidence 3100 0000001 13568999999975321 125799999999999999999888899999999999999
Q ss_pred ecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCC
Q 009358 250 VDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAK 316 (537)
Q Consensus 250 ~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~ 316 (537)
.||.+++|..++++.|.||||+||+|+++++ |.|+++|+.+... ......++|+|.+...
T Consensus 241 ~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~~---G~y~~~~~~~~~~----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 241 VEGGSLKNHNVQTTLIPAGGAAIVEFKVEVP---GTFILVDHSIFRA----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp GGGSSCEECSBSEEEECTTEEEEEEEECCSC---EEEEEEESSTHHH----HTTSCEEEEEEESCCC
T ss_pred cCCccCCCccceEEEECCCeeEEEEEEcCCC---CeEEEEecccccc----cccCceEEEEecCCCC
Confidence 9999999999999999999999999999986 9999999975542 1246799999987763
No 24
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.8e-45 Score=372.55 Aligned_cols=268 Identities=17% Similarity=0.208 Sum_probs=212.1
Q ss_pred cccCccEEEEEEEEEEEEee-cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCc
Q 009358 24 AVASITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY 102 (537)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~ 102 (537)
.+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.....+||.++
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 45678999999999999887 5999999999999999999999999999999999 5899999999876544566667
Q ss_pred ccccccCCCCeEEEEEEeCCCccceEEecchhh-----hh-ccceeeEEEcCCCCCC----CCCCCCCCceeEEeeeeec
Q 009358 103 ITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW-----LR-ATVYGPLVIFPKRGVP----YPFPKPYKEVPIIFGEWFN 172 (537)
Q Consensus 103 vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~-----~~-~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~~ 172 (537)
++| |+||++++|+|++ +++||||||||.++ +. +||+|+|||++++..+ .+. .+|+|++|+++||++
T Consensus 104 ~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 104 LTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYI 179 (333)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECC
T ss_pred eeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeecc
Confidence 775 9999999999998 78999999999973 55 8999999999765321 122 358899999999988
Q ss_pred cC--hHHH---------HHH--hhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeE
Q 009358 173 AD--TEAI---------INQ--SLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFS 239 (537)
Q Consensus 173 ~~--~~~~---------~~~--~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~ 239 (537)
.. ...+ +.. ....+ ..++.++|||+.+++. ..+.+++++|++||||++|.+....+ ..
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~ 250 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAVMDT---LIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HL 250 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHHHTT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EE
T ss_pred CccccccccccccccccccchhHHhhc---cCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EE
Confidence 31 1100 000 01111 3468999999975431 14579999999988877776644444 44
Q ss_pred EcCCeEEEEEecCCCcC-ce-EecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCC
Q 009358 240 IANHSVTVVDVDAIYIK-SF-QTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (537)
Q Consensus 240 i~gh~~~via~DG~~v~-P~-~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~ 315 (537)
+++|.|+|++ ||.+++ |. .+|++.|+||||+||+|+++++ |+|+++||.+... ......++++|.+..
T Consensus 251 i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~p---G~y~~~ch~~~h~----~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 251 IGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQP---GVYAYVNHNLIEA----VHKGATAHVLVEGEW 320 (333)
T ss_dssp ETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTCCEEEEEEESCC
T ss_pred ECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCCC---EEEEEecChhhhH----hhCCCEEEEEEcCCC
Confidence 8999999999 999996 44 5899999999999999999986 9999999976432 024668999998654
No 25
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=9.4e-46 Score=365.44 Aligned_cols=240 Identities=20% Similarity=0.274 Sum_probs=198.1
Q ss_pred cccCccEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcc
Q 009358 24 AVASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (537)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~v 103 (537)
.+.+.+|+|+|+|++.. .+......+++||++|||+||+++||+|+|+|+|.++++++|||||+++.. ++||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-C
Confidence 45678999999999853 233444567899999999999999999999999999999999999999875 499999 9
Q ss_pred cccccCCCCeEEEEEEeCC------------CccceEEecchhh------hh-ccceeeEEEcCCCCCCCCCCCCCCcee
Q 009358 104 TQCPIQTGQSYVYNFTISG------------QRGTLFWHAHISW------LR-ATVYGPLVIFPKRGVPYPFPKPYKEVP 164 (537)
Q Consensus 104 tq~~i~PG~~~~y~f~~~~------------~~Gt~wYH~h~~~------~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~ 164 (537)
+||+|+||++|+|+|++.+ ++||||||||.++ +. +||+|+|||+++.... .|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceE
Confidence 9999999999999999843 3799999999863 44 8999999999987532 288999
Q ss_pred EEeeeeeccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCe
Q 009358 165 IIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHS 244 (537)
Q Consensus 165 l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~ 244 (537)
|+++|| +|||+.++ ..+.++++.|+++||||+|.+.. .+.||||||.
T Consensus 152 l~l~~~-------------------------~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~~ 198 (276)
T 3kw8_A 152 IVFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGHR 198 (276)
T ss_dssp EEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTCC
T ss_pred EEeccc-------------------------ccceeccc-------CCCCEEEecCCEEEEEEecCCCc-ceeEEEccce
Confidence 988653 79999653 45789999999999999999974 6679999999
Q ss_pred EEEEEecCCCc----CceEecEEEECCcceEEEEEEeCC--CCCCceEEEEEeeccCCCCCCCCcceEEEEEEecC
Q 009358 245 VTVVDVDAIYI----KSFQTDILLITPGQTTNILLKAKP--SYPNATFLMSARPYATGQGTFDNSTVAGILEYEAP 314 (537)
Q Consensus 245 ~~via~DG~~v----~P~~~d~v~l~pGeR~dv~v~~~~--~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~ 314 (537)
|++++ ||... .+..+|++.|.|||++++++++++ .+ |.|++|||...... ....+.+.+...
T Consensus 199 f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~np--G~w~~HCH~~~H~~-----~GM~g~~~V~~~ 266 (276)
T 3kw8_A 199 WADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGA--GAWMYHCHVQSHSD-----MGMVGLFLVKKP 266 (276)
T ss_dssp EESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCS--EEEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred eEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCC--CeEEEECCCchHhh-----CCCeEEEEEeCC
Confidence 99975 77543 246799999999999999999985 34 99999999754321 345677776543
No 26
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=2.8e-45 Score=368.40 Aligned_cols=245 Identities=18% Similarity=0.265 Sum_probs=198.8
Q ss_pred ccccccCccEEEEEEEEEEEEeecCe-eeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCC
Q 009358 21 AGLAVASITRHYKFDIKMQNVTRLCH-TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADG 99 (537)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG 99 (537)
..+.+.+.+|+|+|.+++ -++|. .+.++..||++|||+||+++||+|+|+|+|.+++++||||||+++.. .+||
T Consensus 5 ~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~--~~dG 79 (313)
T 3tas_A 5 KTAPAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEI--SSDG 79 (313)
T ss_dssp CBCCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSC
T ss_pred ccCCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCc--cCCC
Confidence 344567788999998753 34553 34456779999999999999999999999999999999999999865 4899
Q ss_pred CCcccccccCCCCeEEEEEEeC------------CCccceEEecchhhh------h-ccceeeEEEcCCCCCCCCCCCCC
Q 009358 100 PAYITQCPIQTGQSYVYNFTIS------------GQRGTLFWHAHISWL------R-ATVYGPLVIFPKRGVPYPFPKPY 160 (537)
Q Consensus 100 v~~vtq~~i~PG~~~~y~f~~~------------~~~Gt~wYH~h~~~~------~-~Gl~G~liV~~~~~~~~~~~~~d 160 (537)
++ ++||+|+||++|+|+|++. .++||||||||..++ . +||+|+|||+++.+. ..|
T Consensus 80 ~~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d 153 (313)
T 3tas_A 80 TK-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPD 153 (313)
T ss_dssp ST-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCS
T ss_pred Cc-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccc
Confidence 98 5999999999999999862 367999999998654 2 799999999998753 248
Q ss_pred CceeEEeeeeeccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEE
Q 009358 161 KEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSI 240 (537)
Q Consensus 161 ~e~~l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i 240 (537)
+|++|+++||+ +||+..+ ..+.+.++.|++|||||+|++.. .+.|||
T Consensus 154 ~e~~l~~~d~t-------------------------~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g~~-~hpfHl 200 (313)
T 3tas_A 154 RTHTIVFNDMT-------------------------INNRPAH-------TGPDFEATVGDRVEFVMITHGEY-YHTFHL 200 (313)
T ss_dssp EEEEEEEETTE-------------------------ETTCCTT-------CCCCEEEETTCEEEEEEEEESSC-CEEEEE
T ss_pred ccceeeccchh-------------------------cccCCcc-------cccccccccCCEEEEEEeccccc-ceeeee
Confidence 99999999873 5666542 24579999999999999999954 566999
Q ss_pred cCCeEEEEEecCCCc---CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecC
Q 009358 241 ANHSVTVVDVDAIYI---KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAP 314 (537)
Q Consensus 241 ~gh~~~via~DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~ 314 (537)
|||.|+|++.||... .|..+|++.|.||||++++|.+.+...-|.|+++||...... ....+++..+..
T Consensus 201 HGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~-----~GM~~~f~V~~~ 272 (313)
T 3tas_A 201 HGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSD-----MGMVGLFLVKKP 272 (313)
T ss_dssp TTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred cCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHH-----CCCeEEEEEECC
Confidence 999999999998776 478899999999999999998875311199999999754332 355777777543
No 27
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.1e-45 Score=408.88 Aligned_cols=227 Identities=15% Similarity=0.194 Sum_probs=175.4
Q ss_pred CeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCc--------ccccccCCCCeEEE
Q 009358 45 CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY--------ITQCPIQTGQSYVY 116 (537)
Q Consensus 45 g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~--------vtq~~i~PG~~~~y 116 (537)
|..+..|+ ++|||+|||++||+|+|+|+|.+++++||||||+++.. ++||+|+ +|||+|+||++|+|
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~--~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY 137 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWK--ASEGAEYDDQTSQREKEDDKVFPGGSHTY 137 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCS--SSSCCCSSCSCCSSSSSSSSCCTTCEECC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCc--cccCCccCCCCcccccccCcCCCCCeEEE
Confidence 45555553 89999999999999999999999999999999999754 2555554 89999999999999
Q ss_pred EEEeCC---------CccceEEecchhhh--h-ccceeeEEEcCCCCCCCCCCCCCCceeEEeee------eeccChHHH
Q 009358 117 NFTISG---------QRGTLFWHAHISWL--R-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGE------WFNADTEAI 178 (537)
Q Consensus 117 ~f~~~~---------~~Gt~wYH~h~~~~--~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d------~~~~~~~~~ 178 (537)
+|++++ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++|++++ ||+......
T Consensus 138 ~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~ 217 (742)
T 2r7e_A 138 VWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSL 217 (742)
T ss_dssp EEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC--
T ss_pred EEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccc
Confidence 999853 46999999999874 4 89999999999865332221223788888764 555433221
Q ss_pred HHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCC-ceeeEEcCCeEEEEEecCCCcCc
Q 009358 179 INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHSVTVVDVDAIYIKS 257 (537)
Q Consensus 179 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P 257 (537)
+.. ..........+.++|||+.. | ..+.+++++|++|||||+|++... .+.||||||+|+|++
T Consensus 218 ~~~-~~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg-------- 281 (742)
T 2r7e_A 218 MQD-RDAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN-------- 281 (742)
T ss_dssp ------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT--------
T ss_pred ccc-CCCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe--------
Confidence 110 01111122356789999964 2 245789999999999999999875 678999999999984
Q ss_pred eEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 258 FQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 258 ~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
..+|++.|.|||+++|+++++++ |.|+++||....
T Consensus 282 ~~~Dtv~v~Pg~~~~v~~~~~~p---G~w~~hCH~~~H 316 (742)
T 2r7e_A 282 HRQASLEISPITFLTAQTLLMDL---GQFLLFCHISSH 316 (742)
T ss_dssp EECCSCCCCTTCCCEEEECCCSC---SEECCCCCSSSS
T ss_pred EecceEEeCCCcEEEEEEEeCCC---eeEEEEeCChhH
Confidence 34789999999999999999987 999999997544
No 28
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=6.8e-45 Score=362.75 Aligned_cols=241 Identities=20% Similarity=0.250 Sum_probs=194.2
Q ss_pred ccCccEEEEEEEEEEEEeecC-eeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcc
Q 009358 25 VASITRHYKFDIKMQNVTRLC-HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (537)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~v 103 (537)
+.+.+|+|+|.+++.. ++ ..+.++..||++|||+||+++||+|+|+|+|.+++++||||||+++.. ++||++ +
T Consensus 25 ~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~--~~DG~~-~ 98 (299)
T 3t9w_A 25 AQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDV--NSDGTL-M 98 (299)
T ss_dssp --CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred cCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCC--ccCCCc-c
Confidence 5667899999998753 33 334455679999999999999999999999999999999999999764 499997 8
Q ss_pred cccccCCCCeEEEEEEeC------------CCccceEEecchhhh------h-ccceeeEEEcCCCCCCCCCCCCCCcee
Q 009358 104 TQCPIQTGQSYVYNFTIS------------GQRGTLFWHAHISWL------R-ATVYGPLVIFPKRGVPYPFPKPYKEVP 164 (537)
Q Consensus 104 tq~~i~PG~~~~y~f~~~------------~~~Gt~wYH~h~~~~------~-~Gl~G~liV~~~~~~~~~~~~~d~e~~ 164 (537)
+||+|+||++|+|+|+++ .++||||||||..++ . +||+|+|||+++.+. ..|+|++
T Consensus 99 ~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~ 173 (299)
T 3t9w_A 99 NGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFT 173 (299)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEE
T ss_pred ccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccce
Confidence 999999999999999974 268999999998653 2 699999999988753 2488999
Q ss_pred EEeeeeeccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCe
Q 009358 165 IIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHS 244 (537)
Q Consensus 165 l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~ 244 (537)
|++++|+ +||+..+ ..+.++++.|++|||||+|++... +.||||||.
T Consensus 174 l~~~~~~-------------------------~Ng~~~~-------~~p~l~v~~Ge~Vr~~liN~~~~~-HpfHlHGh~ 220 (299)
T 3t9w_A 174 VVFNDMM-------------------------INNRAHH-------DAPTFEANLGERVEWIAIGHGSNF-HTFHLHGHR 220 (299)
T ss_dssp EEEETTE-------------------------ETTCCTT-------CCCEEEEETTCEEEEEEEEESSCC-CEEEETTCC
T ss_pred eeeeeee-------------------------ecCcccc-------ccccceecCCCEEEEEEEeccccc-eeeeEecce
Confidence 9987653 6777542 356899999999999999999755 569999999
Q ss_pred EEEEEecCCCcC---ceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecC
Q 009358 245 VTVVDVDAIYIK---SFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAP 314 (537)
Q Consensus 245 ~~via~DG~~v~---P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~ 314 (537)
|+|+..|+.... +..+|++.|.||||++++|.+.+...-|.|+++||...... ....+++.....
T Consensus 221 F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~-----~GM~~~f~V~~~ 288 (299)
T 3t9w_A 221 WLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSD-----MGMAGMFLVRNA 288 (299)
T ss_dssp EESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHh-----cCCeEEEEEECC
Confidence 999999887663 45689999999999999997765311199999999754331 345666666543
No 29
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=5.9e-44 Score=363.36 Aligned_cols=269 Identities=20% Similarity=0.246 Sum_probs=205.8
Q ss_pred ccCccEEEEEEEEEEEEe--ecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCc
Q 009358 25 VASITRHYKFDIKMQNVT--RLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY 102 (537)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~ 102 (537)
+.+.+++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA---TNAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC---CCCccccceECCCCCCCCCcc
Confidence 456789999999998876 569999999999999999999999999999999996 345666666665556777777
Q ss_pred ccccccCCCCeEEEEEEeCCCccceEEecchhh----hh-ccceeeEEEcCCCCCCCCC---CCCCCceeEEeeeeeccC
Q 009358 103 ITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVPYPF---PKPYKEVPIIFGEWFNAD 174 (537)
Q Consensus 103 vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~----~~-~Gl~G~liV~~~~~~~~~~---~~~d~e~~l~l~d~~~~~ 174 (537)
++| |+||++++|+|++ +++||||||||.++ +. +||+|+|||++++....+. ..+|+|++|+++|||+..
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 776 9999999999998 78999999999864 44 8999999999875422111 135889999999999841
Q ss_pred h--HHH---------HHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCcee-eEEcC
Q 009358 175 T--EAI---------INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELF-FSIAN 242 (537)
Q Consensus 175 ~--~~~---------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~-~~i~g 242 (537)
. ..+ ....... .....++.++|||+.+++.+ .+.+++++|++||| +|++....+. ++|++
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~-----~~~l~v~~GervRl--in~~~~~~~~~~~i~g 253 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTG-----ANALTAKVGETVLL--IHSQANRDTRPHLIGG 253 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSG-----GGCEEEETTCEEEE--EEEESSSCBCEEETTC
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCC-----CcceEcCCCCEEEE--EecCCCCccceEEECC
Confidence 1 100 0000000 00124689999999764321 36799999997765 5666555554 44699
Q ss_pred CeEEEEEecCCCcCce--EecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCC
Q 009358 243 HSVTVVDVDAIYIKSF--QTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (537)
Q Consensus 243 h~~~via~DG~~v~P~--~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~ 315 (537)
|.|+|++ ||.+++|. .++++.|++|||+||+|+++++ |.|+++|+..... ......|+++|++..
T Consensus 254 h~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~p---G~y~~~~h~~~~~----~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 254 HGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQP---GVYAYLNHNLIEA----FELGAAGHIKVEGKW 320 (336)
T ss_dssp CEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred cCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCCC---ceEEEEechhhcc----ccCCCeEEEEECCCC
Confidence 9999997 99999764 4789999999999999999986 9999999965322 024668999998655
No 30
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=5.7e-44 Score=364.09 Aligned_cols=268 Identities=16% Similarity=0.210 Sum_probs=207.4
Q ss_pred cccCccEEEEEEEEEEEEee--cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCC
Q 009358 24 AVASITRHYKFDIKMQNVTR--LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA 101 (537)
Q Consensus 24 ~~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 101 (537)
.+.+.+++|+|++++..++. ||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++......||.+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 34668899999999998874 59999999999999999999999999999999997 78999999877654445555
Q ss_pred cccccccCCCCeEEEEEEeCCCccceEEecchhh----hh-ccceeeEEEcCCCCCC----CCCCCCCCceeEEeeeeec
Q 009358 102 YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW----LR-ATVYGPLVIFPKRGVP----YPFPKPYKEVPIIFGEWFN 172 (537)
Q Consensus 102 ~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~~ 172 (537)
.++| |.||++++|+|++ +++||||||||.++ +. +||+|+|||++++... .+. .+|+|++|+++||++
T Consensus 110 ~~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 5665 9999999999998 68999999999863 55 8999999999875311 122 357899999999997
Q ss_pred c--ChHH---------HHHH--hhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeE
Q 009358 173 A--DTEA---------IINQ--SLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFS 239 (537)
Q Consensus 173 ~--~~~~---------~~~~--~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~ 239 (537)
. .... .... ....+ ..++.++|||+.++.. ..+.+++++|+++||+++|.+...++ .+
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~iNG~~~~~~-----~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~ 256 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKAMRT---LTPTHIVFNGAVGALT-----GDHALTAAVGERVLVVHSQANRDTRP-HL 256 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHHHHT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EE
T ss_pred ccccCCcccccccccccccchhhHhhc---CCCCEEEECCccCCcc-----CCCceEcCCCCEEEEEECCCCCccce-EE
Confidence 3 1111 0000 00011 2458999999975321 14789999999888776666544444 55
Q ss_pred EcCCeEEEEEecCCCcC-ce-EecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCC
Q 009358 240 IANHSVTVVDVDAIYIK-SF-QTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (537)
Q Consensus 240 i~gh~~~via~DG~~v~-P~-~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~ 315 (537)
+++|.|+|++ ||.++. |. .+|++.|+||||+||+|+++++ |.|+++||.+... ......++++|.+..
T Consensus 257 i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~p---G~y~~~~h~~~~h----~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 257 IGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQP---GVYAYVNHNLIEA----FELGAAGHFKVTGEW 326 (340)
T ss_dssp ETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCSC---EEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred ecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCCC---eeeEEEcCchHHH----HhCCCEEEEEECCCC
Confidence 8999999997 999885 43 5899999999999999999986 9999999975311 113567899998755
No 31
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.1e-42 Score=364.49 Aligned_cols=372 Identities=15% Similarity=0.144 Sum_probs=237.7
Q ss_pred cCccEEEEEEEEEEEEeecCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccc
Q 009358 26 ASITRHYKFDIKMQNVTRLCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQ 105 (537)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq 105 (537)
.+.++++++++++.....+| .+++|||++ ||+|+|++||+|+|+|+|.+...++|||||... .+|
T Consensus 25 ~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~ 89 (447)
T 2dv6_A 25 APVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSA 89 (447)
T ss_dssp CCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECC
T ss_pred CCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccc
Confidence 44666777776654455444 456899999 899999999999999999998779999998642 268
Q ss_pred cccCCCCeEEEEEEeCCCccceEEecchhhhh-ccceeeEEEcCCCCCCCCCC-----CCCCceeEEeeeeeccChHHHH
Q 009358 106 CPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFP-----KPYKEVPIIFGEWFNADTEAII 179 (537)
Q Consensus 106 ~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~~~~~~-----~~d~e~~l~l~d~~~~~~~~~~ 179 (537)
|+|+||++++|+|++ .++||||||||..+++ +||+|.|+|+++....+..+ ....++...+ |+.......+.
T Consensus 90 ~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 999999999999997 6799999999998877 79999999998764322100 0001111111 11000000000
Q ss_pred ------HHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCC-CCceeeEEcCCeEEEEEecC
Q 009358 180 ------NQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAAL-NDELFFSIANHSVTVVDVDA 252 (537)
Q Consensus 180 ------~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG 252 (537)
......| ...+.++|||+. ..+.+++++|++|||||+|.+. ...+.+|+||. ++.||
T Consensus 168 l~~~~~~~~~~~g---~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG 231 (447)
T 2dv6_A 168 LETVEVKGQLDDN---TTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGG 231 (447)
T ss_dssp EEEEEEEEEEETT---EEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGG
T ss_pred EEEEEEEEeccCC---ceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCC
Confidence 0000011 123678999984 2368999999999999999985 34566778774 36788
Q ss_pred CCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCC
Q 009358 253 IYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMK 332 (537)
Q Consensus 253 ~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~ 332 (537)
.+ +++.|.||||++++++++++ |+||+||+...... . ......+.|.|.++.. +
T Consensus 232 ~~------~~~~i~pG~~~~~~~~~~~~---G~~~yh~h~~~~~~-~-~~~Gl~g~l~v~~~~~--------------~- 285 (447)
T 2dv6_A 232 AA------AFTQTDPGEETVVTFKALIP---GIYVYHCATPSVPT-H-ITNGMYGLLLVEPEGG--------------L- 285 (447)
T ss_dssp GG------GGCCBCTTCEEEEEEECCSC---EEEEEECCSSSHHH-H-HHTTCEEEEEEECTTC--------------S-
T ss_pred CC------ccEEeCCCCEEEEEEECCCC---eEEEEEeCCCChHH-H-HhCCCEEEEEEeCCCC--------------C-
Confidence 73 33459999999999999986 99999998521000 0 1134567777764321 1
Q ss_pred CCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChh
Q 009358 333 PTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTA 412 (537)
Q Consensus 333 p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~p 412 (537)
| ...... . -.+.+..... ....+ ... .+..... .+ .....|.+||+.|...
T Consensus 286 P---~~d~~~-~----~~~~~~~~~~-~~~~~----g~~--~~~~~~~--------~~---~~~~~~~iNG~~~~~~--- 336 (447)
T 2dv6_A 286 P---QVDREF-Y----VMQGEIYTVK-SFGTS----GEQ--EMDYEKL--------IN---EKPEYFLFNGSVGSLT--- 336 (447)
T ss_dssp C---CCSEEE-E----EEEEEECBSS-CTTCC----EEC--CBBHHHH--------HT---TCCSEEEETTSTTCCC---
T ss_pred C---CCCeeE-E----EEecccccCC-ccccc----ccc--cCChHHh--------hc---cCCCEEEECCcccCCC---
Confidence 1 111110 0 0011110000 00000 000 0000000 00 0112467888754110
Q ss_pred hHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEe
Q 009358 413 LLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIG 492 (537)
Q Consensus 413 ll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~ 492 (537)
....+.++.|++++|+|.|.+. ...||||||||+|+||+
T Consensus 337 ---------------------------------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~ 375 (447)
T 2dv6_A 337 ---------------------------------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVY 375 (447)
T ss_dssp ---------------------------------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEEC
T ss_pred ---------------------------------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEE
Confidence 0134688999999999999642 46899999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCC-ccceEEeCCCCEEEEEEEecCCCC
Q 009358 493 QGFGNYDPSKDRKNFNLIDPV-ERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 493 ~g~G~~~~~~~~~~~n~~~P~-~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
.. |.+ +.+|. +|||+.|+++++++|+|++||||.
T Consensus 376 ~d-G~~----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~ 410 (447)
T 2dv6_A 376 SL-GSV----------VSPPLIGVQTVSVPPGGATIVDFKIDRAGR 410 (447)
T ss_dssp GG-GCS----------SSCCEEEESEEEECTTEEEEEEEECCSCEE
T ss_pred cC-Ccc----------cCCCcccccEEEECCCcEEEEEEECCCCEE
Confidence 84 321 23444 699999999999999999999983
No 32
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.1e-41 Score=345.80 Aligned_cols=238 Identities=20% Similarity=0.267 Sum_probs=191.5
Q ss_pred cCccEEEEEEEEEEEEeecCeeeE-EEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCccc
Q 009358 26 ASITRHYKFDIKMQNVTRLCHTKS-IITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYIT 104 (537)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~g~~~~-~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vt 104 (537)
.+++++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+++. .++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-cc
Confidence 45779999999875 3453222 1224899999999999999999999999999999999999987 4599999 89
Q ss_pred ccccCCCCeEEEEEEeCC------------CccceEEecchh------hhh-ccceeeEEEcCCCCCCCCCCCCCCceeE
Q 009358 105 QCPIQTGQSYVYNFTISG------------QRGTLFWHAHIS------WLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPI 165 (537)
Q Consensus 105 q~~i~PG~~~~y~f~~~~------------~~Gt~wYH~h~~------~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l 165 (537)
||+|+||++++|+|++.. ++|+||||||.. .+. .||+|+|||+++.+.. .|+|++|
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-----pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCCC-----CCceEEE
Confidence 999999999999999832 359999999973 344 8999999999886532 3789998
Q ss_pred EeeeeeccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeE
Q 009358 166 IFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSV 245 (537)
Q Consensus 166 ~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 245 (537)
+++|| +|||+.++ ..+.++++.||+|||||+|.+.. .+.||||||.|
T Consensus 194 ~~~d~-------------------------~iNG~~~~-------~~~~l~v~~Ge~vri~l~N~g~~-~HpfHlHGh~f 240 (343)
T 3cg8_A 194 VFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGHRW 240 (343)
T ss_dssp EEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCE
T ss_pred Ecccc-------------------------eecccCCC-------CCccEEeCCCCEEEEEEEcCCcc-ccccEecCcEE
Confidence 88764 68998642 34679999999999999999974 56699999999
Q ss_pred EEEEecCCCcC----ceEecEEEECCcceEEEEEEeCC--CCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCC
Q 009358 246 TVVDVDAIYIK----SFQTDILLITPGQTTNILLKAKP--SYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (537)
Q Consensus 246 ~via~DG~~v~----P~~~d~v~l~pGeR~dv~v~~~~--~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~ 315 (537)
+|+ .||.+.. +..+|++.|.|||++++++++++ .+ |.|+++||..... .....+++.+....
T Consensus 241 ~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~p--G~w~~HCHi~~H~-----~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 241 ADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGA--GAWMYHCHVQSHS-----DMGMVGLFLVKKPD 308 (343)
T ss_dssp ESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCS--EEEEEEECSHHHH-----HTTCEEEEEEECTT
T ss_pred EEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCC--eeEEEeCCCHHHH-----hccCcEEEEEecCC
Confidence 997 4776543 46789999999999999999742 23 9999999975432 13567778886443
No 33
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.8e-41 Score=373.60 Aligned_cols=263 Identities=16% Similarity=0.197 Sum_probs=191.1
Q ss_pred cCccEEEEEEEEEEEEeec--C------------eeeEE--EEE----------------cCcCCCceEEEecCCEEEEE
Q 009358 26 ASITRHYKFDIKMQNVTRL--C------------HTKSI--ITV----------------NGQFPGPRIVAREGDRLIIK 73 (537)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~--g------------~~~~~--~~~----------------NG~~PgP~i~v~~Gd~v~v~ 73 (537)
.+++|+|.+.+++..+... | ..+++ ..| ++++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4689999999999987744 1 11222 223 45789999999999999999
Q ss_pred EEecCCCCceeEecCccccCCCCCCCCCccc--------ccccCCCCeEEEEEEeCCC-----cc----ceEEecchhh-
Q 009358 74 VVNHVPNNISIHWHGIRQLLSGWADGPAYIT--------QCPIQTGQSYVYNFTISGQ-----RG----TLFWHAHISW- 135 (537)
Q Consensus 74 v~N~l~~~~siH~HG~~~~~~~~~DGv~~vt--------q~~i~PG~~~~y~f~~~~~-----~G----t~wYH~h~~~- 135 (537)
|+|.++++++|||||+++.. +|||+|+++ ||+|+||++|+|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 99999999999999999864 499999887 9999999999999998643 57 9999999964
Q ss_pred -hh-ccceeeEEEcCCCCCCC--CCCCCCCceeEEee------eeeccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCc
Q 009358 136 -LR-ATVYGPLVIFPKRGVPY--PFPKPYKEVPIIFG------EWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLY 205 (537)
Q Consensus 136 -~~-~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~l~------d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~ 205 (537)
|. +||+|+|||+++..... ..+..++|++|+++ ||++........... .......++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~iNG~~~--- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA-SSEVKNSHEFHAINGMIY--- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS---
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC-CcchhhcCceeccCCEec---
Confidence 44 89999999999864321 11223689999999 777765432100000 001123468999999964
Q ss_pred ccCCCCcceEEEeCCcEEEEEEEecCCCC-ceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCc
Q 009358 206 NCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNA 284 (537)
Q Consensus 206 ~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g 284 (537)
..+.+++++|++|||||+|++... .+.||+|||.|+|++.|| ..+|++.|+||||+||+|+++++ |
T Consensus 237 -----~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~p---G 303 (647)
T 1sdd_B 237 -----NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASKP---G 303 (647)
T ss_dssp -----CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCSS---E
T ss_pred -----CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEeccc---e
Confidence 136799999999999999999764 778999999999998875 57899999999999999999987 9
Q ss_pred eEEEEEeeccCCCCCCCCcceEEEEEEe
Q 009358 285 TFLMSARPYATGQGTFDNSTVAGILEYE 312 (537)
Q Consensus 285 ~y~i~~~~~~~~~~~~~~~~~~ail~Y~ 312 (537)
.|+++||...... ....+++.+.
T Consensus 304 ~w~~hch~~~h~~-----~Gm~~~~~V~ 326 (647)
T 1sdd_B 304 WWLLDTEVGEIQR-----AGMQTPFLIV 326 (647)
T ss_dssp EEEEECCCHHHHT-----TTCEEEEEEE
T ss_pred EeecccCcccccc-----cccccceeee
Confidence 9999999754322 2445555553
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=4.2e-43 Score=351.59 Aligned_cols=216 Identities=17% Similarity=0.224 Sum_probs=159.2
Q ss_pred EEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccc----cCCCCCCCCCccc--ccccCCCCeEEEEEEeCC
Q 009358 49 SIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQ----LLSGWADGPAYIT--QCPIQTGQSYVYNFTISG 122 (537)
Q Consensus 49 ~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~----~~~~~~DGv~~vt--q~~i~PG~~~~y~f~~~~ 122 (537)
...++| ++|||+|+|++||+|+|+|+|.++++++|||||++. .+.+++||+++++ ||+|+||++|+|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 335578 589999999999999999999999999999999994 4444555555555 799999999999999854
Q ss_pred C---------ccceEEecchhh--hh-ccceeeEEEcCCCCC---CCCCCCCCCceeEEeeeeeccChHHHHHHhhcCCC
Q 009358 123 Q---------RGTLFWHAHISW--LR-ATVYGPLVIFPKRGV---PYPFPKPYKEVPIIFGEWFNADTEAIINQSLQTGA 187 (537)
Q Consensus 123 ~---------~Gt~wYH~h~~~--~~-~Gl~G~liV~~~~~~---~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~g~ 187 (537)
+ +||||||||... +. +||+|+|||+++... ..+. ..|+|++|+++||....+ .
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~---------~-- 196 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS---------W-- 196 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS---------S--
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc---------c--
Confidence 4 379999999876 44 899999999987532 1111 347899999999843211 0
Q ss_pred CCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCC-CceeeEEcCCeEEEEEecCCCcCceEecEEEEC
Q 009358 188 GPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLIT 266 (537)
Q Consensus 188 ~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~ 266 (537)
.....+.++|||+... ..+.+++++|++|||||+|++.. ..+.||+|||.|++ || ..+|++.|.
T Consensus 197 ~~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~ 261 (306)
T 1sdd_A 197 NQTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLV 261 (306)
T ss_dssp SCCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEE
T ss_pred ccCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEEC
Confidence 0123578999999642 24578999999999999999987 45679999999975 77 458999999
Q ss_pred CcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 267 PGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 267 pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
||||++|+|+++++ |.|+++||....
T Consensus 262 pger~~v~~~~~~p---G~~~~hch~~~H 287 (306)
T 1sdd_A 262 SATSTTANMTVSPE---GRWTIASLIPRH 287 (306)
T ss_dssp TTCCBC-----------CCCCCBCCSTTT
T ss_pred CCcEEEEEEEcCCC---eEEEEEeCChHH
Confidence 99999999999987 999999997543
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=4.5e-40 Score=347.98 Aligned_cols=260 Identities=20% Similarity=0.284 Sum_probs=211.2
Q ss_pred cCccEEEEEEEEEEEEee-cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC--CCceeEecCccccCCCCCCCCCc
Q 009358 26 ASITRHYKFDIKMQNVTR-LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP--NNISIHWHGIRQLLSGWADGPAY 102 (537)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~~ 102 (537)
.+.++.|+|++++..... +|....+|+|||++|||+|++++||+++|||+|.+. ..++|||||+.+ +||+|.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 345678888887766666 688899999999999999999999999999999985 579999999852 699987
Q ss_pred ccccccCCCCeEEEEEEeCCCccceEEecchh---hhh-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHH
Q 009358 103 ITQCPIQTGQSYVYNFTISGQRGTLFWHAHIS---WLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAI 178 (537)
Q Consensus 103 vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~---~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~ 178 (537)
.+| |.|||+++|.|++ +++||||||||.. .+. .||+|+|+|+++... +..|+|.+++++||++......
T Consensus 235 ~~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~ 307 (447)
T 2dv6_A 235 FTQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGT 307 (447)
T ss_dssp GCC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTC
T ss_pred cEE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCcccc
Confidence 665 9999999999998 7899999999974 344 899999999986532 2357899999999987532100
Q ss_pred -------HHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEec
Q 009358 179 -------INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVD 251 (537)
Q Consensus 179 -------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 251 (537)
..... + ..++.++|||+.+++.. ...+++++|++|||||+|++....+.||||||+|+||+.|
T Consensus 308 ~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~d 377 (447)
T 2dv6_A 308 SGEQEMDYEKLI--N---EKPEYFLFNGSVGSLTR-----SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSL 377 (447)
T ss_dssp CEECCBBHHHHH--T---TCCSEEEETTSTTCCCC-----CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGG
T ss_pred cccccCChHHhh--c---cCCCEEEECCcccCCCC-----CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcC
Confidence 00001 1 13578999999865321 2478999999999999999987788899999999999999
Q ss_pred CCCcCc-e-EecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCC
Q 009358 252 AIYIKS-F-QTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPA 315 (537)
Q Consensus 252 G~~v~P-~-~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~ 315 (537)
|.+++| . .+|++.|.||||++|+|+++++ |.|+||||..... .....++++|.+..
T Consensus 378 G~~~~~p~~~~dtv~l~pg~r~~i~~~~~~p---G~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 378 GSVVSPPLIGVQTVSVPPGGATIVDFKIDRA---GRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp GCSSSCCEEEESEEEECTTEEEEEEEECCSC---EEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred CcccCCCcccccEEEECCCcEEEEEEECCCC---EEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 999954 4 5899999999999999999986 9999999976543 13568999997654
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=2.6e-41 Score=374.42 Aligned_cols=250 Identities=13% Similarity=0.134 Sum_probs=195.9
Q ss_pred ccCccEEEEEEEEEEEE--eecCe---------------eeEE-E------EEcC-----------cCCCceEEEecCCE
Q 009358 25 VASITRHYKFDIKMQNV--TRLCH---------------TKSI-I------TVNG-----------QFPGPRIVAREGDR 69 (537)
Q Consensus 25 ~~~~~~~~~l~~~~~~~--~~~g~---------------~~~~-~------~~NG-----------~~PgP~i~v~~Gd~ 69 (537)
-.+.+|+|.|.+++..+ +|+|. .+.+ + +|++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 35789999999999874 56553 1222 2 2223 58999999999999
Q ss_pred EEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCC---------CccceEEecchhhh--h-
Q 009358 70 LIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISG---------QRGTLFWHAHISWL--R- 137 (537)
Q Consensus 70 v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~---------~~Gt~wYH~h~~~~--~- 137 (537)
|+|+|+|.++++++|||||+++..... ||+++ +||+|+||++|+|+|++++ ++||||||||.+.+ .
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~ 286 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVH 286 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHH
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHh
Confidence 999999999999999999999988753 69998 9999999999999999854 89999999999874 4
Q ss_pred ccceeeEEEcCCCCCCC--CCCCCCCceeEEeee------eeccChHHHHHHhhcCC--------CCCCCCCcEEEcCcc
Q 009358 138 ATVYGPLVIFPKRGVPY--PFPKPYKEVPIIFGE------WFNADTEAIINQSLQTG--------AGPNVSDAYTINGLP 201 (537)
Q Consensus 138 ~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~g--------~~~~~~~~~liNG~~ 201 (537)
+||+|+|||+++..... .....++|++|++++ ||+..... .+.... ......+.++|||+.
T Consensus 287 ~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~ING~~ 363 (770)
T 2r7e_B 287 SGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAINGYI 363 (770)
T ss_dssp TSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTTSCT
T ss_pred CCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccCCcc
Confidence 89999999999864321 112347899888754 55443211 000000 001123568999996
Q ss_pred CCCcccCCCCcceEEEeCCcEEEEEEEecCCCC-ceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCC
Q 009358 202 GPLYNCSAKDTFKLKVKPGKTYLLRLINAALND-ELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPS 280 (537)
Q Consensus 202 ~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~ 280 (537)
.. ..+.+++++|++|||||+|++... .+.||||||.|+|++.||. .+|++.|.||||++|+|+++++
T Consensus 364 ~~-------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~p 431 (770)
T 2r7e_B 364 MD-------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSKA 431 (770)
T ss_dssp TT-------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSSC
T ss_pred CC-------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCCC
Confidence 41 245789999999999999999754 6789999999999999974 8999999999999999999987
Q ss_pred CCCceEEEEEeecc
Q 009358 281 YPNATFLMSARPYA 294 (537)
Q Consensus 281 ~~~g~y~i~~~~~~ 294 (537)
|.|+|+||...
T Consensus 432 ---G~w~~hcH~~~ 442 (770)
T 2r7e_B 432 ---GIWRVECLIGE 442 (770)
T ss_dssp ---BCCCBCCCSHH
T ss_pred ---CceEEEecccc
Confidence 99999999753
No 37
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=5.7e-39 Score=369.34 Aligned_cols=363 Identities=13% Similarity=0.096 Sum_probs=239.6
Q ss_pred eeeEEEEEcCcCCC--ceEEEecCCEEEEEEEecCCCCceeEecCccccC-CCCCCCCCcccccccCCCCeEEEEEEeCC
Q 009358 46 HTKSIITVNGQFPG--PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLL-SGWADGPAYITQCPIQTGQSYVYNFTISG 122 (537)
Q Consensus 46 ~~~~~~~~NG~~Pg--P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DGv~~vtq~~i~PG~~~~y~f~~~~ 122 (537)
..+.+.+|||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.|+||++.+| |+|.||.+++|+|.+ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 57799999999999 889999999999999976 5569999999988 89999999999 999999999999997 7
Q ss_pred CccceEEecchhhhh-ccceeeEEEcCCCCCCCCCCCCCCceeEEe----eeeeccChHHHHHHhhc-CCCCCCCCCcEE
Q 009358 123 QRGTLFWHAHISWLR-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIF----GEWFNADTEAIINQSLQ-TGAGPNVSDAYT 196 (537)
Q Consensus 123 ~~Gt~wYH~h~~~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l----~d~~~~~~~~~~~~~~~-~g~~~~~~~~~l 196 (537)
++||||||||...++ +||+|.++|++......++..++.|.++++ .||++.....+...... .+.. +..++
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999988 999999999987544444335678899999 89999887765432211 1111 23444
Q ss_pred EcCccCC---------C-------ccc----------CCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEe
Q 009358 197 INGLPGP---------L-------YNC----------SAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDV 250 (537)
Q Consensus 197 iNG~~~~---------~-------~~~----------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 250 (537)
+|+.... + +.- -+...+.|++++|+++++|++|... ..+.+|.||... ...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl~~--~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQT--ESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCBC--SCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccccc--cCC
Confidence 4443110 0 000 0123478999999999999999964 455577777433 222
Q ss_pred cCCCcCceEecEEEECCcceEEEEEEeCCCC-------CCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCccc
Q 009358 251 DAIYIKSFQTDILLITPGQTTNILLKAKPSY-------PNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTV 323 (537)
Q Consensus 251 DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~-------~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~ 323 (537)
| ...+.||++++..+.+.+.. ..|.||++++..... .. .....+.|.+.....
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~--q~-~~GL~G~liV~~~~~------- 904 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVK--DL-YSGLIGPLIVCRRPY------- 904 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHH--HH-HTTCEEEEEEECCC--------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHH--hh-hccccceeEecCccc-------
Confidence 2 12467999988888876521 125999998842100 00 122344444432210
Q ss_pred ccCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeccCcCC-C------------CC-CCCc-
Q 009358 324 SIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQFPANVPQTVNKRFFFTVGLGTNP-C------------PK-NQTC- 388 (537)
Q Consensus 324 ~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~-~------------~~-~~~~- 388 (537)
. . +..+ +...|..+.+.. +.... . +. -...
T Consensus 905 ----l-~--~~~~---------------------------~~d~D~~l~~~~-~d~~~~~y~~~n~~~~~~~P~~v~~~~ 949 (1065)
T 2j5w_A 905 ----L-K--VFNP---------------------------RRKLEFALLFLV-FDENESWYLDDNIKTYSDHPEKVNKDD 949 (1065)
T ss_dssp -----------CC---------------------------CCEEEEEEEEEE-EEGGGSTTHHHHHHHHCSCGGGCCTTC
T ss_pred ----c-c--ccCC---------------------------CcceEEEEEEEe-ecCCcceeeccCcccccCCccccCcch
Confidence 0 0 0000 000011111110 00000 0 00 0000
Q ss_pred cCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEE
Q 009358 389 QGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVM 468 (537)
Q Consensus 389 ~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi 468 (537)
.... .....|.+||+.| .++..+.++.|++|+|+|
T Consensus 950 ~~~~-~~~~~~~iNG~~~--------------------------------------------~~~~~~~v~~G~~vr~~l 984 (1065)
T 2j5w_A 950 EEFI-ESNKMHAINGRMF--------------------------------------------GNLQGLTMHVGDEVNWYL 984 (1065)
T ss_dssp HHHH-HHTEEEEETTBCT--------------------------------------------TCCCCCEEETTCEEEEEE
T ss_pred hhhh-ccCceEEECCccC--------------------------------------------CCCccEEeCCCCEEEEEE
Confidence 0000 0001234444432 113346789999999999
Q ss_pred eeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 469 QDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 469 ~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
.|.+. ....||||||||+|+|++.| |.+||||.|+++++++|||++||||.
T Consensus 985 ~N~g~-~~~~HpfHlHG~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~ 1035 (1065)
T 2j5w_A 985 MGMGN-EIDLHTVHFHGHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGI 1035 (1065)
T ss_dssp EECCS-TTCCEEEEESSCCEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEE
T ss_pred EeCCC-CCcceeEEEcccEEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCee
Confidence 99642 34789999999999999863 67999999999999999999999994
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=8.3e-38 Score=345.97 Aligned_cols=217 Identities=19% Similarity=0.275 Sum_probs=169.7
Q ss_pred cCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCC-----CCCcccccccCCCCeEEEEEEeCCCcc-----
Q 009358 56 QFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWAD-----GPAYITQCPIQTGQSYVYNFTISGQRG----- 125 (537)
Q Consensus 56 ~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~D-----Gv~~vtq~~i~PG~~~~y~f~~~~~~G----- 125 (537)
.+|||+||+++||+|+|+|+|.+++++||||||+++. ++|+| |+++++||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999984 55666 567788999999999999999865554
Q ss_pred ----ceEEecchhhhh---ccceeeEEEcCCCCCC-CC-CCCCCCceeEEeee------eeccChHHHHHHhhcCC--CC
Q 009358 126 ----TLFWHAHISWLR---ATVYGPLVIFPKRGVP-YP-FPKPYKEVPIIFGE------WFNADTEAIINQSLQTG--AG 188 (537)
Q Consensus 126 ----t~wYH~h~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~g--~~ 188 (537)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ ||+..... .+.... ..
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~---~~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQ---RFLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHH---HHSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchh---hcccCchhcc
Confidence 999999998753 8999999999875321 11 11458899999964 55432211 111000 00
Q ss_pred ------CCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCC-CceeeEEcCCeEEEEEecCCCcCceEec
Q 009358 189 ------PNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTD 261 (537)
Q Consensus 189 ------~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d 261 (537)
......++|||+... + . .+.+++|++|||||+|+|.. ..+.||||||+|+|+ |..+|
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~----~---~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~D 667 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFD----S---L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYED 667 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSS----C---C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBC
T ss_pred cccccccccCceeeecCcCCC----C---C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cccee
Confidence 001135789999642 1 2 38999999999999998764 457899999999986 57889
Q ss_pred EEEECCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 262 ILLITPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 262 ~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
++.|.||||++|+|+++++ |.|+++||.+..
T Consensus 668 tv~l~Pg~~~~v~~~ad~p---G~w~~hcH~~~H 698 (742)
T 2r7e_A 668 TLTLFPFSGETVFMSMENP---GLWILGCHNSDF 698 (742)
T ss_dssp SSCCCCCSSEECCEECCCC---CCSCCEECCCST
T ss_pred EEEECCCcEEEEEEEcCCC---eEEEEEeCCchH
Confidence 9999999999999999987 999999997654
No 39
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.84 E-value=1.1e-20 Score=191.73 Aligned_cols=222 Identities=19% Similarity=0.181 Sum_probs=136.9
Q ss_pred CcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEe---cCCCcCceEecEEEECCcc
Q 009358 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDV---DAIYIKSFQTDILLITPGQ 269 (537)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~d~v~l~pGe 269 (537)
..+++||+. ..|+|++++|+++|+||+|..... ..+|.|| +.+... ||.+. +....|.|||
T Consensus 24 ~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~~~-~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 24 KVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTSLP-HTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEEESSSC-BCCEEET--CCCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEECCcc---------CCCeEEEECCCEEEEEEEECCCCC-ccEEeCC--CCcCCCcccCCCCc----cccCccCCCC
Confidence 689999984 247999999999999999998643 3455555 555554 99853 3445799999
Q ss_pred eEEEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccccccc
Q 009358 270 TTNILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTT 349 (537)
Q Consensus 270 R~dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 349 (537)
|+++.++++++ |+||+|||..... ........+.+....... . .+ +.. . +..... ...
T Consensus 88 ~~~y~f~~~~~---Gt~wyH~H~~~~~--q~~~~Gl~G~liV~p~~~-----------~-~~-~~~--~-d~e~~l-~l~ 145 (339)
T 2zwn_A 88 SYTYKFKADRI---GTLWYHCHVNVNE--HVGVRGMWGPLIVDPKQP-----------L-PI-EKR--V-TKDVIM-MMS 145 (339)
T ss_dssp EEEEEEECCSC---EEEEEECCSSHHH--HTTTSCCEEEEEEECSSC-----------C-TT-GGG--C-SEEEEE-EEE
T ss_pred eEEEEEECCCC---EEEEEEecCCchh--hhhcCCceEeEEecCCCc-----------c-cc-ccc--C-CceEEE-Eee
Confidence 99999999865 9999999953210 011012233333322110 0 00 000 0 000000 000
Q ss_pred ccccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCC
Q 009358 350 RLRSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDF 429 (537)
Q Consensus 350 ~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~ 429 (537)
+.. ..... .+.. . +..+...-.|.|||+.|.
T Consensus 146 d~~-~~~~~----~~~~-----------~-----------g~~~~~~~~~~ING~~~~---------------------- 176 (339)
T 2zwn_A 146 TWE-SAVAD----KYGE-----------G-----------GTPMNVADYFSVNAKSFP---------------------- 176 (339)
T ss_dssp EEC-GGGTT----CTTC-----------C-----------CSTTSCCCEEEETTBCTT----------------------
T ss_pred hee-ccccc----ccCC-----------C-----------CCCccccceEEEccccCC----------------------
Confidence 000 00000 0000 0 000001114678886441
Q ss_pred CCCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCC
Q 009358 430 PSTPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNL 509 (537)
Q Consensus 430 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~ 509 (537)
....+.++.|++|+|+|.|.+ ...||||||||+|+||+.. |. +.
T Consensus 177 ----------------------~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~D-G~----------~~ 220 (339)
T 2zwn_A 177 ----------------------LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKD-GL----------PL 220 (339)
T ss_dssp ----------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEET-TE----------EE
T ss_pred ----------------------CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeC-Ce----------ec
Confidence 012467889999999999965 3699999999999999983 21 23
Q ss_pred CCCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 510 IDPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 510 ~~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
.+|.++||+.|++|+++.|+|++||||.
T Consensus 221 ~~p~~~dtv~l~pg~r~~v~~~~~~pG~ 248 (339)
T 2zwn_A 221 DSPYYADTVLVSPGERYDVIIEADNPGR 248 (339)
T ss_dssp EEEEEESEEEECTTCEEEEEEECCSCSE
T ss_pred CCCcEEEEEEECCCCEEEEEEEeCCCee
Confidence 3588999999999999999999999993
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.80 E-value=1.9e-19 Score=180.59 Aligned_cols=224 Identities=20% Similarity=0.232 Sum_probs=141.8
Q ss_pred CcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEE-EEecCCCcCceEecEEEECCcceE
Q 009358 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTV-VDVDAIYIKSFQTDILLITPGQTT 271 (537)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~v~l~pGeR~ 271 (537)
..+++||+. ..|+|+++.|+++++|+.|.... ...+|+||....- .+.||.+- +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 689999984 35799999999999999999854 4569999986542 36788753 234578999999
Q ss_pred EEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccccccccc
Q 009358 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRL 351 (537)
Q Consensus 272 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 351 (537)
+..++++++ |+||.|||...... .......+.|....... . .. +. .. +.. +.-.+
T Consensus 89 ~y~f~~~~~---Gt~wYH~H~~~~~~--~~~~Gl~G~lIV~~~~~-----------~-~~-~~--~~-d~e----~~l~l 143 (318)
T 3g5w_A 89 TYKFKAEPA---GTMWYHCHVNVNEH--VTMRGMWGPLIVEPKNP-----------L-PI-EK--TV-TKD----YILML 143 (318)
T ss_dssp EEEEECCSC---EEEEEECCSSHHHH--HHHSCCEEEEEEECSSC-----------C-HH-HH--TC-CEE----EEEEE
T ss_pred EEEEEcCCC---EEEEEEccCChhhh--hccCCCEEEEEEcCCCc-----------c-cc-cc--cc-cce----eEEEE
Confidence 999999876 99999999621100 00012333444432211 0 00 00 00 000 00000
Q ss_pred ccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCC
Q 009358 352 RSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPS 431 (537)
Q Consensus 352 ~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~ 431 (537)
....... . ... +.... .. ...-.|.|||+.| |
T Consensus 144 ~dw~~~~-~-~~~-----------~~~~~----------~~-~~~d~~~ING~~~--~---------------------- 175 (318)
T 3g5w_A 144 SDWVSSW-A-NKP-----------GEGGI----------PG-DVFDYYTINAKSF--P---------------------- 175 (318)
T ss_dssp EEECGGG-T-TCT-----------TCCCC----------TT-CCCCEEEETTBCB--T----------------------
T ss_pred Eeecccc-c-ccc-----------ccCCC----------CC-CcCcEEEEcCcCC--C----------------------
Confidence 0000000 0 000 00000 00 0011478998755 1
Q ss_pred CCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCC
Q 009358 432 TPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLID 511 (537)
Q Consensus 432 ~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~ 511 (537)
.+..+.++.|++|+|+|.|.+ ...||||||||.|+||+.. |. .+.+
T Consensus 176 --------------------~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~d-G~----------~~~~ 221 (318)
T 3g5w_A 176 --------------------ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKD-GF----------PLDK 221 (318)
T ss_dssp --------------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEET-TE----------EEEE
T ss_pred --------------------CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecC-Cc----------ccCC
Confidence 012357899999999999965 3689999999999999983 21 2346
Q ss_pred CCccceEEeCCCCEEEEEEEecCCCC
Q 009358 512 PVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 512 P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
|.+|||+.|++++.+.|+|+|||||.
T Consensus 222 p~~~dtv~l~pger~~v~~~a~~pG~ 247 (318)
T 3g5w_A 222 PIKGDTVLIGPGERYDVILNMDNPGL 247 (318)
T ss_dssp EEEESEEEECTTCEEEEEEECCSCSE
T ss_pred CccccEEEECCCCEEEEEEECCCCee
Confidence 88999999999999999999999994
No 41
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.80 E-value=4.6e-18 Score=178.79 Aligned_cols=256 Identities=11% Similarity=0.109 Sum_probs=161.5
Q ss_pred cEEEEEEEEEEEEeec-----------CeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEe-cCccccCCC
Q 009358 29 TRHYKFDIKMQNVTRL-----------CHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHW-HGIRQLLSG 95 (537)
Q Consensus 29 ~~~~~l~~~~~~~~~~-----------g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~ 95 (537)
.+++.|.++.-....+ |.....++|||+. .|+|+|++| ++|+||.|... ....+|+ ||..+....
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 5677888876544433 3345789999987 599999999 99999999984 5678999 886654433
Q ss_pred CCCCCC-----cccccccCCCCeEEEEEEeCCCccceEEecchhhhhccc-e-----------eeEEEcCCCCCCCCCCC
Q 009358 96 WADGPA-----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATV-Y-----------GPLVIFPKRGVPYPFPK 158 (537)
Q Consensus 96 ~~DGv~-----~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~Gl-~-----------G~liV~~~~~~~~~~~~ 158 (537)
.||.+ .+.+..|.||||+++.+++ ++.|+||++++......|+ . .+++-........+.
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 79964 2457889999999999998 5789999999865432221 1 111111100000000
Q ss_pred CCCceeEEeeeeeccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceee
Q 009358 159 PYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFF 238 (537)
Q Consensus 159 ~d~e~~l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~ 238 (537)
..+.+..|..+................ ..++|||+.+.. ..+.+.++.|++++|+|+|. ..+.|
T Consensus 306 -~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~HP~ 369 (451)
T 2uxt_A 306 -TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQAF 369 (451)
T ss_dssp ---CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEEEE
T ss_pred -cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCcCe
Confidence 000000000000000000000000000 047799997632 23468999999999999998 35669
Q ss_pred EEcCCeEEEEEecCCCc---CceEecEEEECCcceEEEEEEeCCCC-CCceEEEEEeeccCCCCCCCCcceEEEEEEec
Q 009358 239 SIANHSVTVVDVDAIYI---KSFQTDILLITPGQTTNILLKAKPSY-PNATFLMSARPYATGQGTFDNSTVAGILEYEA 313 (537)
Q Consensus 239 ~i~gh~~~via~DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~~~-~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~ 313 (537)
|||||.|+|++.||.+. +|...|++.| |+++.|.++++++. ..|.|++|||.+.... ....+.+.+..
T Consensus 370 HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d-----~GMm~~~~v~~ 441 (451)
T 2uxt_A 370 HIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMAD-----RGSIGQLLVNP 441 (451)
T ss_dssp EETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHH-----TTCEEEEEEEC
T ss_pred EECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHh-----CCCcEEEEEcc
Confidence 99999999999999876 4788999999 99999999999871 0134999999765432 24456666653
No 42
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.79 E-value=4.1e-19 Score=175.95 Aligned_cols=211 Identities=18% Similarity=0.176 Sum_probs=141.7
Q ss_pred CCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceE
Q 009358 192 SDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (537)
Q Consensus 192 ~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~ 271 (537)
...+++||+. ..++|+++.|+++++++.|..... ..+|+||.. ..+.||.+- .+...|.||+++
T Consensus 54 ~~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~~~~-~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRI---------PGPTLWAREGDALRIHFTNAGAHP-HTIHFHGVH--RATMDGTPG----IGAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEECSSSC-BCCEESSCC--CGGGSCCTT----STTCSBCTTCEE
T ss_pred EEEEEECCcc---------CCCcEEEeCCCEEEEEEEeCCCCc-ccEEecccc--ccccCCCCC----ccceeECCCCEE
Confidence 3689999984 357999999999999999998654 559999986 457899854 244568999999
Q ss_pred EEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccccccccc
Q 009358 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRL 351 (537)
Q Consensus 272 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 351 (537)
+..++++++ |.||+|||...... . ......+.|..+.... .+.
T Consensus 118 ~y~f~~~~~---Gt~~yH~H~~~~~~-~-~~~Gl~G~liV~~~~~------------------~~~-------------- 160 (288)
T 3gdc_A 118 TYEFDATPF---GTHLYHCHQSPLAP-H-IAKGLYGGFIVEPKEG------------------RPP-------------- 160 (288)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHH-H-HHTTCEEEEEEECSSC------------------CCC--------------
T ss_pred EEEEEcCCC---ccEEEEecCcchHH-H-HhCcCeEEEEEeCCcc------------------CCC--------------
Confidence 999999766 99999999632100 0 0123344444432210 000
Q ss_pred ccccCCCCCCCCCCCcceEEEEEec-cCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCC
Q 009358 352 RSLANAQFPANVPQTVNKRFFFTVG-LGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFP 430 (537)
Q Consensus 352 ~~l~~~~~p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~ 430 (537)
.++++.+.+. +... .+ ...-.|+|||+.|..
T Consensus 161 ---------------~d~e~~l~~~d~~~~--------~g---~~~~~~~iNG~~~~~---------------------- 192 (288)
T 3gdc_A 161 ---------------ADDEMVMVMNGYNTD--------GG---DDNEFYSVNGLPFHF---------------------- 192 (288)
T ss_dssp ---------------CSEEEEEEEEEECCS--------ST---TCCSEEEETTSTTHH----------------------
T ss_pred ---------------CcceEEEEEeeEecC--------CC---CCcceEEECcccccc----------------------
Confidence 0122221111 1100 00 001146899975510
Q ss_pred CCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCC
Q 009358 431 STPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLI 510 (537)
Q Consensus 431 ~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~ 510 (537)
....+.++.|++|+|.|.|.+. ....||||||||.|+|++.|. .+.
T Consensus 193 ---------------------~~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~------------~~~ 238 (288)
T 3gdc_A 193 ---------------------MDFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGT------------MLT 238 (288)
T ss_dssp ---------------------HHSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTC------------CSS
T ss_pred ---------------------cCcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCC------------ccC
Confidence 0113577899999999999652 124699999999999997541 124
Q ss_pred CCCccceEEeCCCCEEEEEEEecCCCC
Q 009358 511 DPVERNTVGVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 511 ~P~~RDTv~vp~~g~~viRf~adNPG~ 537 (537)
.|.++||+.|++++.+.|+|+++|||.
T Consensus 239 ~~~~~Dtv~v~pg~~~~v~~~~~~pG~ 265 (288)
T 3gdc_A 239 PSEYTDTISQVQGQRGILELRFPYPGK 265 (288)
T ss_dssp CSEEESEEEEETTCEEEEEECCCSCEE
T ss_pred CCceeeEEEeCCCceEEEEEECCCCEE
Confidence 568999999999999999999999983
No 43
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.77 E-value=9.7e-18 Score=176.00 Aligned_cols=235 Identities=15% Similarity=0.196 Sum_probs=164.0
Q ss_pred ccEEEEEEEEEEEEee------------cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEecCccccCC
Q 009358 28 ITRHYKFDIKMQNVTR------------LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLS 94 (537)
Q Consensus 28 ~~~~~~l~~~~~~~~~------------~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~ 94 (537)
..+++-|.++.-.... .|.....++|||+. .|.|.|++| ++|+||.|... ....+|++|......
T Consensus 145 ~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi 222 (439)
T 2xu9_A 145 EAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLI 222 (439)
T ss_dssp TSEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEE
T ss_pred CCCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEE
Confidence 3567777776543221 13455789999997 599999999 99999999984 567899999765544
Q ss_pred CCCCCCCc-----ccccccCCCCeEEEEEEeCCCccceEEecchhhhh----ccc--------------eeeEEEcCCC-
Q 009358 95 GWADGPAY-----ITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR----ATV--------------YGPLVIFPKR- 150 (537)
Q Consensus 95 ~~~DGv~~-----vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~----~Gl--------------~G~liV~~~~- 150 (537)
. .||.+- +....|.|||+++..+++ +++|.||++++..... .|| ....+++...
T Consensus 223 ~-~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 300 (439)
T 2xu9_A 223 A-ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKN 300 (439)
T ss_dssp E-ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSS
T ss_pred e-cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCC
Confidence 3 699752 345669999999999997 6699999999743211 122 1122222111
Q ss_pred CCCCCCCCC-----C-----CceeEEeeeeeccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCC
Q 009358 151 GVPYPFPKP-----Y-----KEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPG 220 (537)
Q Consensus 151 ~~~~~~~~~-----d-----~e~~l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G 220 (537)
....+.+.. + ....+.+.- +. ....+.|||+.+.. ....+.++.|
T Consensus 301 ~~~~~~p~~l~~~~~l~~~~~~r~~~l~~----------------~~---~g~~~~iNg~~~~~------~~~~~~~~~g 355 (439)
T 2xu9_A 301 PKPLPLPKALSPFPTLPAPVVTRRLVLTE----------------DM---MAARFFINGQVFDH------RRVDLKGQAQ 355 (439)
T ss_dssp CCCCCCCSCCCCCCCCCCCSEEEEEEEEE----------------EG---GGTEEEETTBCCCT------TCCCEEECTT
T ss_pred CccccCcccCCCcccCCCCCcceEEEEEe----------------ec---cCceEeECCEECCC------CCCceecCCC
Confidence 111111100 0 001111110 00 01368899997631 2345889999
Q ss_pred cEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCc-CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 221 KTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI-KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 221 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
++++|+|.|.+...|. ||||||.|+|++.+|... .|...|++.|.||+++.|.++++++ |.|++|||.+..
T Consensus 356 ~~~~~~~~N~~~~~HP-~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adnp---G~w~~HCHil~H 427 (439)
T 2xu9_A 356 TVEVWEVENQGDMDHP-FHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLREK---GRTVFHCHIVEH 427 (439)
T ss_dssp CEEEEEEEECSSSCEE-EEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCSC---EEEEEEESSHHH
T ss_pred CEEEEEEEcCCCCCCC-ceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCCC---CCEEEECCcchh
Confidence 9999999999865555 999999999999999876 6889999999999999999998887 999999997543
No 44
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.76 E-value=2.5e-18 Score=174.17 Aligned_cols=195 Identities=13% Similarity=0.074 Sum_probs=131.3
Q ss_pred CcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCC---------
Q 009358 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSY--------- 281 (537)
Q Consensus 211 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~--------- 281 (537)
..++|++++|+++|+||+|..... ..+|.||..+. .+.||.++ +...|.|||+++..++++++.
T Consensus 75 pGP~I~v~~Gd~v~v~~~N~l~~~-~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 75 PGPLIEVNEGDTLHIEFTNTMDVR-ASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp SCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCEEEEECCCEEEEEEEECCCCC-eeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCC
Confidence 357999999999999999999654 44999998877 68999864 344689999999999997641
Q ss_pred -CCceEEEEEeeccCCCC-CCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 009358 282 -PNATFLMSARPYATGQG-TFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (537)
Q Consensus 282 -~~g~y~i~~~~~~~~~~-~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (537)
..|.||.+++....... ........+.+....... + .
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~----------------~-~------------------------ 186 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----------------V-L------------------------ 186 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----------------C-C------------------------
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecCCC----------------C-C------------------------
Confidence 12789999985321100 000011222222211100 0 0
Q ss_pred CCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccC
Q 009358 360 PANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNY 439 (537)
Q Consensus 360 p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~ 439 (537)
+|+++.+.++ .|+|||+.|.
T Consensus 187 -------pd~e~~l~~~---------------------d~~iNG~~~~-------------------------------- 206 (343)
T 3cg8_A 187 -------PDATHTIVFN---------------------DMTINNRKPH-------------------------------- 206 (343)
T ss_dssp -------CSEEEEEEEE---------------------TTEETTCCTT--------------------------------
T ss_pred -------CCceEEEEcc---------------------cceecccCCC--------------------------------
Confidence 1233333321 1578887431
Q ss_pred CCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEE
Q 009358 440 TGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVG 519 (537)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~ 519 (537)
....+.++.|++|+|+|.|.+ ...||||||||+|+|++. |.++. ....+.+|||+.
T Consensus 207 ------------~~~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~ 262 (343)
T 3cg8_A 207 ------------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKI 262 (343)
T ss_dssp ------------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEE
T ss_pred ------------CCccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeEE
Confidence 022468899999999999965 479999999999999754 33221 112457899999
Q ss_pred eCCCCEEEEEEEe---cCCCC
Q 009358 520 VPSGGWVAIRFRA---DNPGD 537 (537)
Q Consensus 520 vp~~g~~viRf~a---dNPG~ 537 (537)
|++++++.|+|++ ||||.
T Consensus 263 v~PG~~~~v~~~~~~~~~pG~ 283 (343)
T 3cg8_A 263 TGPADSFGFQIIAGEGVGAGA 283 (343)
T ss_dssp ECTTCEEEEEEETTTTTCSEE
T ss_pred eCCCCEEEEEEEECCCCCCee
Confidence 9999999999995 89983
No 45
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.70 E-value=1.8e-15 Score=161.90 Aligned_cols=239 Identities=14% Similarity=0.138 Sum_probs=154.9
Q ss_pred eEEEEEcCcCC---------CceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCCc----ccccccCCCCe
Q 009358 48 KSIITVNGQFP---------GPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQS 113 (537)
Q Consensus 48 ~~~~~~NG~~P---------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~----vtq~~i~PG~~ 113 (537)
...++|||+.. -|+|+|++|+++|+||.|... ....+|++|..+.... .||.+- +....|.||||
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 46789999853 189999999999999999985 5678899887655443 799642 33566999999
Q ss_pred EEEEEEeCCCccceEEecchhhh---h-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeecc-------ChH---HHH
Q 009358 114 YVYNFTISGQRGTLFWHAHISWL---R-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNA-------DTE---AII 179 (537)
Q Consensus 114 ~~y~f~~~~~~Gt~wYH~h~~~~---~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~-------~~~---~~~ 179 (537)
++..+++.+.+|.||.+++.... . .|+..+++.........+..... . ...+.+.... ... ...
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 99999985557999999985421 1 34444555443221111110000 0 0000000000 000 000
Q ss_pred HHhhcCCC-CCCCCCcEEEcCccCCCccc-------------C--CCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCC
Q 009358 180 NQSLQTGA-GPNVSDAYTINGLPGPLYNC-------------S--AKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH 243 (537)
Q Consensus 180 ~~~~~~g~-~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 243 (537)
........ .......|.|||+.+..-.. . ......+.++.|++++++++| . ..+.||||||
T Consensus 348 ~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N--~-~~HP~HLHGh 424 (521)
T 1v10_A 348 DINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG--G-GNHPFHLHGH 424 (521)
T ss_dssp SEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC--C-BSCEEEESSC
T ss_pred eEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC--C-CCCCEEEccc
Confidence 00000000 00011268899997632100 0 012357899999999999999 3 3455999999
Q ss_pred eEEEEEecCCC----cCceEecEEEE-CCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 244 SVTVVDVDAIY----IKSFQTDILLI-TPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 244 ~~~via~DG~~----v~P~~~d~v~l-~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
.|+|++.+|.. ..|...|++.| .+|+++.|.++++++ |.|++|||....
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNP---G~W~~HCHi~~H 478 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNP---GPWFLHCHIDWH 478 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSC---EEEEEEESCHHH
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCC---eeEEEeeChHHH
Confidence 99999999875 26889999999 799999999999988 999999997554
No 46
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.70 E-value=2.5e-15 Score=160.15 Aligned_cols=259 Identities=13% Similarity=0.115 Sum_probs=162.7
Q ss_pred EEEEEEEEEEEeecCe-----eeEEEEEcCcCC--------CceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCC
Q 009358 31 HYKFDIKMQNVTRLCH-----TKSIITVNGQFP--------GPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGW 96 (537)
Q Consensus 31 ~~~l~~~~~~~~~~g~-----~~~~~~~NG~~P--------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~ 96 (537)
++-|.++.-....++. ....++|||+.. .|+|+|++|+++|+||.|... ....+|++|..+....
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4566665543333332 246789999863 289999999999999999984 5678888887655443
Q ss_pred CCCCC----cccccccCCCCeEEEEEEeCCCccceEEecchhhh-------h-ccceeeEEEcCCCCCCCCCCCCCCcee
Q 009358 97 ADGPA----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWL-------R-ATVYGPLVIFPKRGVPYPFPKPYKEVP 164 (537)
Q Consensus 97 ~DGv~----~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~-------~-~Gl~G~liV~~~~~~~~~~~~~d~e~~ 164 (537)
.||.+ .+....|.||||++..+++...+|.||.+++.... . .|+..+++.........|......+ .
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~-~ 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPN-P 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSS-C
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCc-c
Confidence 79964 13345689999999999985557999999875311 1 3443445444322111110000000 0
Q ss_pred EEeeeeeccCh--HHH--------HHHhhcCCCCCCCCCcEEEcCccCCCccc-------------C--CCCcceEEEeC
Q 009358 165 IIFGEWFNADT--EAI--------INQSLQTGAGPNVSDAYTINGLPGPLYNC-------------S--AKDTFKLKVKP 219 (537)
Q Consensus 165 l~l~d~~~~~~--~~~--------~~~~~~~g~~~~~~~~~liNG~~~~~~~~-------------~--~~~~~~~~v~~ 219 (537)
..+.++..... ... ........... ....|.|||+.+..-.- . ......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGF-SGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEE-ETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEeec-cCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 000 00000000000 11268899997632100 0 01235789999
Q ss_pred CcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCc----CceEecEEEE-CCcceEEEEEEeCCCCCCceEEEEEeecc
Q 009358 220 GKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI----KSFQTDILLI-TPGQTTNILLKAKPSYPNATFLMSARPYA 294 (537)
Q Consensus 220 G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~v~l-~pGeR~dv~v~~~~~~~~g~y~i~~~~~~ 294 (537)
|++++++++|......+.||||||.|+|++.+|... .|...|++.| .+|+++.|.++++++ |.|++|||...
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnP---G~W~~HCHil~ 456 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNP---GPWFFHCHIEF 456 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSC---EEEEEEESSHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCC---eeeeEecCchh
Confidence 999999999543344556999999999999999752 6889999999 899999999999988 99999999754
Q ss_pred C
Q 009358 295 T 295 (537)
Q Consensus 295 ~ 295 (537)
.
T Consensus 457 H 457 (503)
T 1hfu_A 457 H 457 (503)
T ss_dssp H
T ss_pred H
Confidence 4
No 47
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.69 E-value=1.7e-16 Score=156.02 Aligned_cols=195 Identities=12% Similarity=0.057 Sum_probs=132.6
Q ss_pred CcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCC----------
Q 009358 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPS---------- 280 (537)
Q Consensus 211 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~---------- 280 (537)
..|+|+++.|+++++++.|... ....+|.||..+.- +.||.+ +..-.|.||+++...++++++
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 4689999999999999999974 55669999987654 579976 233458999999999999863
Q ss_pred CCCceEEEEEeeccCCC-CCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 009358 281 YPNATFLMSARPYATGQ-GTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (537)
Q Consensus 281 ~~~g~y~i~~~~~~~~~-~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (537)
...|.||.|||...... .........+.|....+.. +
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----------------~-------------------------- 144 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----------------V-------------------------- 144 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----------------C--------------------------
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCCC----------------c--------------------------
Confidence 11289999999532110 0000112333333321110 0
Q ss_pred CCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccC
Q 009358 360 PANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNY 439 (537)
Q Consensus 360 p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~ 439 (537)
. .|+++.+.++ .|+|||+.|.
T Consensus 145 ---~---~drE~~l~l~---------------------~~~iNG~~~~-------------------------------- 165 (276)
T 3kw8_A 145 ---L---PDATHTIVFN---------------------DMTINNRKPH-------------------------------- 165 (276)
T ss_dssp ---C---CSEEEEEEEE---------------------TTEETTCCTT--------------------------------
T ss_pred ---c---cccceEEEec---------------------ccccceeccc--------------------------------
Confidence 0 0344444321 1578987541
Q ss_pred CCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEE
Q 009358 440 TGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVG 519 (537)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~ 519 (537)
....+.++.|++|+|+|.|.+ ...||||||||.|+|++.| .++. ....+.+|||+.
T Consensus 166 ------------~~p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~G--~~~~-------p~~~~~~~Dtv~ 221 (276)
T 3kw8_A 166 ------------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRTG--ILTG-------PDDPSRVIDNKI 221 (276)
T ss_dssp ------------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSSS--SCCS-------TTCCCCEESEEE
T ss_pred ------------CCCCEEEecCCEEEEEEecCC---CcceeEEEccceeEEeccC--ccCC-------CcccccCCccEE
Confidence 012468899999999999965 3799999999999998653 3321 112356999999
Q ss_pred eCCCCEEEEEEEec---CCCC
Q 009358 520 VPSGGWVAIRFRAD---NPGD 537 (537)
Q Consensus 520 vp~~g~~viRf~ad---NPG~ 537 (537)
|++++...++|+++ |||.
T Consensus 222 v~pg~~~~~~~~~~~~~npG~ 242 (276)
T 3kw8_A 222 TGPADSFGFQIIAGEGVGAGA 242 (276)
T ss_dssp ECTTCEEEEEEETTTTTCSEE
T ss_pred eCCCceEEEEEEeccCCCCCe
Confidence 99999999999998 8983
No 48
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.66 E-value=3e-15 Score=157.56 Aligned_cols=243 Identities=15% Similarity=0.175 Sum_probs=159.8
Q ss_pred EEEEEEEEEEEEeecC-------------eeeEEEEEcCcCCCceEEEecCCEEEEEEEecC-CCCceeEecCccccCCC
Q 009358 30 RHYKFDIKMQNVTRLC-------------HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLLSG 95 (537)
Q Consensus 30 ~~~~l~~~~~~~~~~g-------------~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~ 95 (537)
.+| |.++......+| .....++|||+. .|+|.|++|+ |+||.|.. .....+|++|.......
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa 256 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG 256 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE
Confidence 455 777765544444 234689999997 5899999999 99999997 56788999997755443
Q ss_pred CCCCCC-----cccccccCCCCeEEEEEEeCCCccceEEecchhhhhccc----------eeeEEEcCCCCCCCC-----
Q 009358 96 WADGPA-----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATV----------YGPLVIFPKRGVPYP----- 155 (537)
Q Consensus 96 ~~DGv~-----~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~Gl----------~G~liV~~~~~~~~~----- 155 (537)
.||.. .+....|.||||++..+++ .+.|+|...++.... .|+ ..-+-+.... ...|
T Consensus 257 -~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~lP~~l~~ 332 (481)
T 3zx1_A 257 -TDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDR-DKMMVKEEPNTLFLANINLKKEN-VELPKNLKI 332 (481)
T ss_dssp -ETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCC-CCSSCCCCCCCEEEEEEEEECCC-CCCCSCSCC
T ss_pred -cCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccc-cCccccCCCCceeEEEEecCCCC-ccCCccccC
Confidence 78732 2345679999999999997 667887766643211 111 1111121111 1111
Q ss_pred ---CCCCCCceeEEeeeeeccChHHHHHHhhcCCCCC---CCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEe
Q 009358 156 ---FPKPYKEVPIIFGEWFNADTEAIINQSLQTGAGP---NVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLIN 229 (537)
Q Consensus 156 ---~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~g~~~---~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN 229 (537)
.+..+....+.++.... ... .....+... .....++|||+.+. ...+.++++.|++++|+|+|
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~-~~~----~~~~~~~~~~~~~~~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~l~N 401 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHM-QMH----GMMGKSEGELKIALASMFLINRKSYD------LKRIDLSSKLGVVEDWIVIN 401 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCS-TTT----TGGGCCHHHHHHHHHTTEEETTBCCC------TTCCCEEEETTCCEEEEEEE
T ss_pred CCCCCCCCcEEEEEEeccch-hcc----cccccccccccccccceeEECCEeCC------CCCceEEeCCCCEEEEEEEc
Confidence 11112233333332110 000 000000000 00125999999753 13457899999999999999
Q ss_pred cCCCCceeeEEcCCeEEEEEe--cCCCc---CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 230 AALNDELFFSIANHSVTVVDV--DAIYI---KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 230 ~~~~~~~~~~i~gh~~~via~--DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
.+... +.||||||+|+|++. ||... ++...|++.|.|||++.|.++++.+ |.|++|||.+..
T Consensus 402 ~~~~~-Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~p---G~w~~HCHil~H 468 (481)
T 3zx1_A 402 KSHMD-HPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFK---GLRMYHCHILEH 468 (481)
T ss_dssp CSSSC-EEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCSC---EEEEEEESSHHH
T ss_pred CCCCc-eeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCCC---eeEEEEcCChHH
Confidence 77554 559999999999999 99765 4678999999999999999999887 999999997543
No 49
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.66 E-value=5e-16 Score=154.33 Aligned_cols=195 Identities=17% Similarity=0.176 Sum_probs=128.7
Q ss_pred CcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCC----------
Q 009358 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPS---------- 280 (537)
Q Consensus 211 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~---------- 280 (537)
+.|+|+++.|++++++|.|.... ...+|.||..+. -+.||.++. .-.|.|||++...++++++
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCC
Confidence 46899999999999999999754 456999998654 367897541 1237899999999987632
Q ss_pred CCCceEEEEEeeccCCCCC-CCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 009358 281 YPNATFLMSARPYATGQGT-FDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (537)
Q Consensus 281 ~~~g~y~i~~~~~~~~~~~-~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (537)
...|.||.+||........ .-.....+.|....... +
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~----------------~-------------------------- 166 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD----------------L-------------------------- 166 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----------------C--------------------------
T ss_pred CCceeEEEecCCcccccchhhhcccccceEEEecccc----------------c--------------------------
Confidence 1129999999853221100 00012233333321110 0
Q ss_pred CCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccC
Q 009358 360 PANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNY 439 (537)
Q Consensus 360 p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~ 439 (537)
..|+++.+.++ .|.+|++.+.
T Consensus 167 ------~~d~e~~l~~~---------------------~~~~Ng~~~~-------------------------------- 187 (299)
T 3t9w_A 167 ------LPKRQFTVVFN---------------------DMMINNRAHH-------------------------------- 187 (299)
T ss_dssp ------CCSEEEEEEEE---------------------TTEETTCCTT--------------------------------
T ss_pred ------Cccccceeeee---------------------eeeecCcccc--------------------------------
Confidence 01344444331 1457775330
Q ss_pred CCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEE
Q 009358 440 TGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVG 519 (537)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~ 519 (537)
....+.++.|+.|+|+|.|.+ ...||||||||.|+|+..+.. ......+.++||+.
T Consensus 188 ------------~~p~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~---------~~~~~~~~~~Dtv~ 243 (299)
T 3t9w_A 188 ------------DAPTFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMR---------TSEYDPSPLIDIKD 243 (299)
T ss_dssp ------------CCCEEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSC---------CSTTCCCCEESEEE
T ss_pred ------------ccccceecCCCEEEEEEEecc---ccceeeeEecceEEEEecccc---------cCCcCCCCceeeEE
Confidence 123567899999999999965 478999999999999887522 12344567899999
Q ss_pred eCCC---CEEEEEEEecCCCC
Q 009358 520 VPSG---GWVAIRFRADNPGD 537 (537)
Q Consensus 520 vp~~---g~~viRf~adNPG~ 537 (537)
|.++ ++.+++|++||||.
T Consensus 244 v~PGe~~~~~via~~~dnPG~ 264 (299)
T 3t9w_A 244 LNPGVSFGFQVIAGEGVGPGM 264 (299)
T ss_dssp CCTTCEEEEEEETTTTTCSEE
T ss_pred eCCceeEEEEEEEeeCCCCee
Confidence 9987 46677888999984
No 50
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.64 E-value=6.3e-15 Score=156.13 Aligned_cols=243 Identities=14% Similarity=0.126 Sum_probs=152.9
Q ss_pred eeEEEEEcCcC---------CCceEEEecCCEEEEEEEecC-CCCceeEecCccccCCCCCCCCCc----ccccccCCCC
Q 009358 47 TKSIITVNGQF---------PGPRIVAREGDRLIIKVVNHV-PNNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQ 112 (537)
Q Consensus 47 ~~~~~~~NG~~---------PgP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~~----vtq~~i~PG~ 112 (537)
....++|||+- +-|.|+|++|+++|+||.|.. .....+|++|..+.... .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 35689999973 347999999999999999987 45678888887654443 799642 3345699999
Q ss_pred eEEEEEEeCCCccceEEecchhhh---h-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChH-------HH---
Q 009358 113 SYVYNFTISGQRGTLFWHAHISWL---R-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTE-------AI--- 178 (537)
Q Consensus 113 ~~~y~f~~~~~~Gt~wYH~h~~~~---~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~-------~~--- 178 (537)
|++..+++.+..|.||.++..... . .|...+++.........|.......-...+.+....... ..
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCC
Confidence 999999985556999998864311 1 233334554433211111100000000000000000000 00
Q ss_pred HHHhhcCCCCCCCCCcEEEcCccCCCccc-----------C----CCCcceEEEeCCcEEEEEEE-ecCCCCceeeEEcC
Q 009358 179 INQSLQTGAGPNVSDAYTINGLPGPLYNC-----------S----AKDTFKLKVKPGKTYLLRLI-NAALNDELFFSIAN 242 (537)
Q Consensus 179 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~-----------~----~~~~~~~~v~~G~~~rlRli-N~~~~~~~~~~i~g 242 (537)
.+........ .....|.|||+.+..... + ......+.++.|++++|.|. |.+. ..+.||+||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~-~~HP~HLHG 403 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAG-GPHPFHLHG 403 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSS-CCCEEEETT
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCC-CCcceeecC
Confidence 0000000000 011368899987531100 0 01234689999999999998 4444 445699999
Q ss_pred CeEEEEEecCCCc----CceEecEEEECC-cceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 243 HSVTVVDVDAIYI----KSFQTDILLITP-GQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 243 h~~~via~DG~~v----~P~~~d~v~l~p-GeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
|.|+|++.+|... .|...|++.|.+ |+.+.+.++++++ |.|++|||....
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnP---G~W~~HCHi~~H 458 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP---GPWFLHCHIDWH 458 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSC---EEEEEEESCHHH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCC---eeEEEEecchhH
Confidence 9999999988654 688999999997 9999999999998 999999997543
No 51
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.63 E-value=3.1e-14 Score=150.82 Aligned_cols=242 Identities=11% Similarity=0.101 Sum_probs=151.6
Q ss_pred eeEEEEEcCcC--------CCceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCCc----ccccccCCCCe
Q 009358 47 TKSIITVNGQF--------PGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQS 113 (537)
Q Consensus 47 ~~~~~~~NG~~--------PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~----vtq~~i~PG~~ 113 (537)
....++|||+- +-|.|+|++|+++|+||.|... ....+|++|..+.... .||.+- +....|.||||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 35689999973 3479999999999999999874 5678888887655443 799642 23456999999
Q ss_pred EEEEEEeCCCccceEEecchhhh---h-ccceeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccCh-------HHH---H
Q 009358 114 YVYNFTISGQRGTLFWHAHISWL---R-ATVYGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADT-------EAI---I 179 (537)
Q Consensus 114 ~~y~f~~~~~~Gt~wYH~h~~~~---~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~-------~~~---~ 179 (537)
++..+++.+..|.||-.+..... . .+..-+++.........|........ ..+.+...... ... .
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCC
Confidence 99999985556999988764211 1 22222344443221111110000000 00000000000 000 0
Q ss_pred HHhhcCCCCCCCCCcEEEcCccCCCccc-----------C----CCCcceEEEeCCcEEEEEEEe---cCCCCceeeEEc
Q 009358 180 NQSLQTGAGPNVSDAYTINGLPGPLYNC-----------S----AKDTFKLKVKPGKTYLLRLIN---AALNDELFFSIA 241 (537)
Q Consensus 180 ~~~~~~g~~~~~~~~~liNG~~~~~~~~-----------~----~~~~~~~~v~~G~~~rlRliN---~~~~~~~~~~i~ 241 (537)
+........ .....|.|||+.+..... + ......+.++.|++++|.|.| .+. ..+.||+|
T Consensus 323 d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~-~~HP~HLH 400 (499)
T 3pxl_A 323 DKAINMAFN-FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPG-APHPFHLH 400 (499)
T ss_dssp SEEEECCEE-ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCS-CSCEEEET
T ss_pred cEEEEEEEE-ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCC-CCccceec
Confidence 000000000 012368899987531100 0 012356899999999999994 433 34569999
Q ss_pred CCeEEEEEecCCCc----CceEecEEEECC---cceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 242 NHSVTVVDVDAIYI----KSFQTDILLITP---GQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 242 gh~~~via~DG~~v----~P~~~d~v~l~p---GeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
||.|+|++.+|... .|...|++.|.+ |+.+.+.++++++ |.|.+|||....
T Consensus 401 Gh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP---G~W~~HCHi~~H 458 (499)
T 3pxl_A 401 GHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP---GPWFLHCHIDFH 458 (499)
T ss_dssp TCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC---EEEEEEESSHHH
T ss_pred CCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC---ceEEEEeCChhH
Confidence 99999999888643 688999999986 9999999999998 999999997543
No 52
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.62 E-value=1.6e-15 Score=152.81 Aligned_cols=223 Identities=14% Similarity=0.156 Sum_probs=136.5
Q ss_pred CcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCC-CceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceE
Q 009358 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (537)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~ 271 (537)
..+++||+. ..++|++++|+++++|++|.... ..+.+|+||.. +.||.+. ...|.|||++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 579999984 35789999999999999999753 45679999864 5788642 1248999999
Q ss_pred EEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccccccccc
Q 009358 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRL 351 (537)
Q Consensus 272 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 351 (537)
++.++++++ |+||+|||...... ... ....+.+....... .|..+..... .+
T Consensus 120 ~y~f~~~~~---Gt~wyH~h~~~~~~-~~~-~Gl~G~~iV~~~~~------------------~p~~d~e~~l-----~~ 171 (327)
T 1kbv_A 120 TFSFKALQP---GLYIYHCAVAPVGM-HIA-NGMYGLILVEPKEG------------------LPKVDKEFYI-----VQ 171 (327)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHH-HHH-TTCEEEEEEECTTC------------------CCCCSEEEEE-----EE
T ss_pred EEEEECCCC---eEEEEEeCCCChhh-hhh-cceEEEEEEecCCC------------------CCCCceEEEE-----Ee
Confidence 999999886 99999998532100 000 12233333332211 1111111000 00
Q ss_pred ccccCCCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCC
Q 009358 352 RSLANAQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPS 431 (537)
Q Consensus 352 ~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~ 431 (537)
....... .... ..... +..... .+.. +. .+.|||+.+..
T Consensus 172 ~d~~~~~----~~~~-~g~~~--~~~~~~--------~~~~-~~--~~~iNG~~~~~----------------------- 210 (327)
T 1kbv_A 172 GDFYTKG----KKGA-QGLQP--FDMDKA--------VAEQ-PE--YVVFNGHVGAL----------------------- 210 (327)
T ss_dssp EEECBSS----CTTC-CEEEC--BCHHHH--------HHTC-CS--EEEETTSTTTT-----------------------
T ss_pred eeeeccC----cccc-ccccc--cChhHh--------ccCC-Cc--eEEEcCcccCC-----------------------
Confidence 0100000 0000 00000 000000 0000 11 35677764310
Q ss_pred CCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCC
Q 009358 432 TPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLID 511 (537)
Q Consensus 432 ~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~ 511 (537)
+. ...+.++.|+.++|+|.|.+. ...|+||+|||.|+||+..-+ +..
T Consensus 211 ------------------~~-~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~------------~~~ 257 (327)
T 1kbv_A 211 ------------------TG-DNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGG------------KLI 257 (327)
T ss_dssp ------------------SG-GGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGS------------SCE
T ss_pred ------------------CC-ceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCC------------cCC
Confidence 00 134688999999999999652 468999999999999998311 224
Q ss_pred CCccceEEeCCCCEEEEEEEecCCC
Q 009358 512 PVERNTVGVPSGGWVAIRFRADNPG 536 (537)
Q Consensus 512 P~~RDTv~vp~~g~~viRf~adNPG 536 (537)
|..+||+.|.+|+.+.|.|++++||
T Consensus 258 p~~~d~l~l~pGer~dv~v~~~~pG 282 (327)
T 1kbv_A 258 NENVQSTIVPAGGSAIVEFKVDIPG 282 (327)
T ss_dssp ECSBSEEEECTTEEEEEEEEECSCE
T ss_pred CCceeEEEECCCCEEEEEEEeCCCe
Confidence 7899999999999999999999998
No 53
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.61 E-value=5.5e-14 Score=150.62 Aligned_cols=228 Identities=11% Similarity=0.101 Sum_probs=150.1
Q ss_pred eEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCCc----ccccccCCCCeEEEEEEeCC
Q 009358 48 KSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQSYVYNFTISG 122 (537)
Q Consensus 48 ~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~----vtq~~i~PG~~~~y~f~~~~ 122 (537)
...++|||+. .|+|.|++|+++|+||.|... ....+|++|..+.... .||.+- +....|.||||++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4678999987 599999999999999999984 5677888886654443 799642 33456999999999999853
Q ss_pred C-ccceEEecchhhhh-------cccee-eEEEcCCCC-CCCC-----CCC-CC---------------CceeEEeeeee
Q 009358 123 Q-RGTLFWHAHISWLR-------ATVYG-PLVIFPKRG-VPYP-----FPK-PY---------------KEVPIIFGEWF 171 (537)
Q Consensus 123 ~-~Gt~wYH~h~~~~~-------~Gl~G-~liV~~~~~-~~~~-----~~~-~d---------------~e~~l~l~d~~ 171 (537)
+ .|.||......... ....+ +++...... .+.+ +.. .+ .+..+.+.--.
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 57899987654321 01112 233222211 0000 000 00 00001110000
Q ss_pred ccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCccc--------------C----CCCcceEEEeCCcEEEEEEEecCCC
Q 009358 172 NADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNC--------------S----AKDTFKLKVKPGKTYLLRLINAALN 233 (537)
Q Consensus 172 ~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~--------------~----~~~~~~~~v~~G~~~rlRliN~~~~ 233 (537)
.. .......++|||+.+....- + ......+.++.|++++|.|.|.+..
T Consensus 325 ------------~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~ 390 (534)
T 1zpu_A 325 ------------DN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG 390 (534)
T ss_dssp ------------EE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS
T ss_pred ------------ec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC
Confidence 00 00112467899986532100 0 0013468899999999999999865
Q ss_pred CceeeEEcCCeEEEEEecCC-----------C---------cCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeec
Q 009358 234 DELFFSIANHSVTVVDVDAI-----------Y---------IKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (537)
Q Consensus 234 ~~~~~~i~gh~~~via~DG~-----------~---------v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 293 (537)
.| .||||||.|+|++.++. + ..|...|++.|.+|+.+.|.++++++ |.|++|||..
T Consensus 391 ~H-P~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDNP---G~W~~HCHi~ 466 (534)
T 1zpu_A 391 TH-PFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNP---GVWFFHCHIE 466 (534)
T ss_dssp CE-EEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCSC---EEEEEEECCH
T ss_pred CC-CeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCCC---eeEEEEeCch
Confidence 54 59999999999998853 1 24778999999999999999999998 9999999975
Q ss_pred cC
Q 009358 294 AT 295 (537)
Q Consensus 294 ~~ 295 (537)
..
T Consensus 467 ~H 468 (534)
T 1zpu_A 467 WH 468 (534)
T ss_dssp HH
T ss_pred hH
Confidence 44
No 54
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.59 E-value=8e-14 Score=150.32 Aligned_cols=224 Identities=17% Similarity=0.169 Sum_probs=139.8
Q ss_pred eEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCC----cccccccCCCCeEEEEEEe-CCCccceEEecchh
Q 009358 61 RIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPA----YITQCPIQTGQSYVYNFTI-SGQRGTLFWHAHIS 134 (537)
Q Consensus 61 ~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~----~vtq~~i~PG~~~~y~f~~-~~~~Gt~wYH~h~~ 134 (537)
+|+|++|+++|+||.|... ....+|++|..+.... .||.+ .+....|.||||++..+++ .+.+|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 4577888887655443 79964 2335669999999999997 34589999998864
Q ss_pred hhh-ccc--eeeEEEcCCCCCCCCCCCCCCceeEEeeeeeccChHHHHHHh---hc---CCCC----------------C
Q 009358 135 WLR-ATV--YGPLVIFPKRGVPYPFPKPYKEVPIIFGEWFNADTEAIINQS---LQ---TGAG----------------P 189 (537)
Q Consensus 135 ~~~-~Gl--~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~---~~---~g~~----------------~ 189 (537)
... ... .+.|-.........+... ..... .| . +........ +. .... .
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~p----~~-~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 356 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQTP----AW-D-DFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVI 356 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCCC----CT-T-CHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCCC----cc-c-cccccccccccccccCCCCCCCCCCcEEEEEEEeeccC
Confidence 311 111 222222222110000000 00000 00 0 000000000 00 0000 0
Q ss_pred CCCCcEEEcCccCCC-----------------------------cc------cCC--CCcceEEEeCCcEEEEEEEecCC
Q 009358 190 NVSDAYTINGLPGPL-----------------------------YN------CSA--KDTFKLKVKPGKTYLLRLINAAL 232 (537)
Q Consensus 190 ~~~~~~liNG~~~~~-----------------------------~~------~~~--~~~~~~~v~~G~~~rlRliN~~~ 232 (537)
.....|.|||+.+.. ++ |.. .....+.++.|++++|.|.|.+.
T Consensus 357 ~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~ 436 (552)
T 1aoz_A 357 NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANM 436 (552)
T ss_dssp TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCC
T ss_pred CCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcc
Confidence 001247788875311 00 000 01235889999999999999875
Q ss_pred C-----CceeeEEcCCeEEEEEe-cCCC----------cCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 233 N-----DELFFSIANHSVTVVDV-DAIY----------IKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 233 ~-----~~~~~~i~gh~~~via~-DG~~----------v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
. ..+.||+|||.|+|++. +|.+ ..|...|++.|.+|+.+.|.++++++ |.|++|||....
T Consensus 437 ~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNP---G~W~~HCHi~~H 512 (552)
T 1aoz_A 437 MKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNP---GVWAFHCHIEPH 512 (552)
T ss_dssp SSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSC---EEEEEEESSHHH
T ss_pred cccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCC---eEEEEEeeehhH
Confidence 3 34669999999999998 4653 25788999999999999999999998 999999997554
No 55
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.59 E-value=3.9e-14 Score=149.09 Aligned_cols=253 Identities=11% Similarity=0.130 Sum_probs=156.2
Q ss_pred EEEEEEEEEEEEeecC--------------eeeEEEEEcCcCCCceEEEecCCEEEEEEEecC-CCCceeEe-cCccccC
Q 009358 30 RHYKFDIKMQNVTRLC--------------HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHW-HGIRQLL 93 (537)
Q Consensus 30 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l-~~~~siH~-HG~~~~~ 93 (537)
.++.|.++.-....+| .....++|||+. .|.+.+ +|+++|+||.|.. .....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4667777665443333 334679999997 488876 6789999999997 45677887 5765433
Q ss_pred CCCCCCCC-----cccccccCCCCeEEEEEEeCCCccceEEecchhhhhccc-----ee---eEEEcC-----CCCCCCC
Q 009358 94 SGWADGPA-----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATV-----YG---PLVIFP-----KRGVPYP 155 (537)
Q Consensus 94 ~~~~DGv~-----~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~Gl-----~G---~liV~~-----~~~~~~~ 155 (537)
.. .||.+ .+....|.|||+++..+++ .+.++|+.-+..... .|+ .. .+-|.+ ....+..
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 305 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDT 305 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcc
Confidence 32 69843 2445679999999999998 567777765542111 111 01 122221 1111100
Q ss_pred C---C---C----CCCceeEEeee-eeccChHHHHH----Hhhc------------CCCCC--CC---C---CcEEEcCc
Q 009358 156 F---P---K----PYKEVPIIFGE-WFNADTEAIIN----QSLQ------------TGAGP--NV---S---DAYTINGL 200 (537)
Q Consensus 156 ~---~---~----~d~e~~l~l~d-~~~~~~~~~~~----~~~~------------~g~~~--~~---~---~~~liNG~ 200 (537)
+ + . ..+++.+.+.. +.......+.. ..+. .|... .+ . ..|+|||+
T Consensus 306 L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 306 LSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred cccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 1 0 0 01222332211 00000000000 0000 01000 00 1 13799999
Q ss_pred cCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCc---eEecEEEECCcceEEEEEEe
Q 009358 201 PGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKS---FQTDILLITPGQTTNILLKA 277 (537)
Q Consensus 201 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P---~~~d~v~l~pGeR~dv~v~~ 277 (537)
.+.. ..+.++++.|++++|+|+|.+....+.||||||+|+|++.||....| ...|++.|. |+++.|++++
T Consensus 386 ~~~~------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f 458 (488)
T 3od3_A 386 AFDM------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKF 458 (488)
T ss_dssp CCCT------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECB
T ss_pred eCCC------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEe
Confidence 7631 34568999999999999999965556699999999999999987743 478999999 9999999999
Q ss_pred CCCCC-CceEEEEEeecc
Q 009358 278 KPSYP-NATFLMSARPYA 294 (537)
Q Consensus 278 ~~~~~-~g~y~i~~~~~~ 294 (537)
+.+.. .|.|++|||.+.
T Consensus 459 ~~~~~~~G~~m~HCH~l~ 476 (488)
T 3od3_A 459 NHDAPKEHAYMAHCHLLE 476 (488)
T ss_dssp CSCCCGGGCEEEEESSHH
T ss_pred ccCCCCCCCEEEeCCchH
Confidence 86421 279999999754
No 56
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.58 E-value=1.6e-13 Score=148.06 Aligned_cols=232 Identities=14% Similarity=0.117 Sum_probs=144.8
Q ss_pred eeEEEEEcCcCCCceEEEecCCEEEEEEEecC-CCCceeEecCc---------cccCCCCCCCCCc-----cc------c
Q 009358 47 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHV-PNNISIHWHGI---------RQLLSGWADGPAY-----IT------Q 105 (537)
Q Consensus 47 ~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~---------~~~~~~~~DGv~~-----vt------q 105 (537)
....++|||+. .|.+.|++| ++|+||.|.. .....+++.|. .+.. .||.+- +. .
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa---~DG~~l~~P~~~~~~~~~~~ 327 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE---eCCeEccCCEEecccCcccE
Confidence 34678999997 599999999 9999999997 45667777654 3333 688542 22 5
Q ss_pred cccCCCCeEEEEEEeCCCccc-eEEecchhhhhcc-----------ceeeEEEcCCC-CCC--CC--CCC----C--C--
Q 009358 106 CPIQTGQSYVYNFTISGQRGT-LFWHAHISWLRAT-----------VYGPLVIFPKR-GVP--YP--FPK----P--Y-- 160 (537)
Q Consensus 106 ~~i~PG~~~~y~f~~~~~~Gt-~wYH~h~~~~~~G-----------l~G~liV~~~~-~~~--~~--~~~----~--d-- 160 (537)
..|.||||++.-+++.+.+|+ ++..........| ..--|.|.... ... .| +.. . +
T Consensus 328 l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~ 407 (612)
T 2g23_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccc
Confidence 679999999999998655675 6655543211111 11114444332 111 11 100 0 0
Q ss_pred -CceeEEee------------eeeccC---hHHHHHHhhcCC-----CCCCCCCcEEEcCccCCCcccCCCCcceEEEeC
Q 009358 161 -KEVPIIFG------------EWFNAD---TEAIINQSLQTG-----AGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKP 219 (537)
Q Consensus 161 -~e~~l~l~------------d~~~~~---~~~~~~~~~~~g-----~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~ 219 (537)
....+++. -|.... ...+ .....+ ........+.|||+.+. ....++++.
T Consensus 408 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------~~~~~~v~~ 478 (612)
T 2g23_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV--QVPAEGVIQVTGADGRTKTYRRTAATFN-------DGLGFTIGE 478 (612)
T ss_dssp CEEEEEEECCTTCTTSTTCCCEEEEEEEC-------CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEET
T ss_pred cceeEEeeccccccccccccceeecccccccccc--ccccccceeeeccCCceeEEEECCccCC-------CCCceEecC
Confidence 00112221 011000 0000 000000 00001135889999753 356799999
Q ss_pred CcEEEEEEEecCCCCceeeEEcCCeEEEEEecCC------------------------Cc---CceEecEEEECCcceEE
Q 009358 220 GKTYLLRLINAALNDELFFSIANHSVTVVDVDAI------------------------YI---KSFQTDILLITPGQTTN 272 (537)
Q Consensus 220 G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~v---~P~~~d~v~l~pGeR~d 272 (537)
|++++|+|+|.+... +.||||||.|+|++.+|. +. ++..+|++.|.||+++.
T Consensus 479 G~~v~w~l~N~~~~~-HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~ 557 (612)
T 2g23_A 479 GTHEQWTFLNLSPIL-HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLR 557 (612)
T ss_dssp TCEEEEEEEECSSSC-EEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEE
T ss_pred CCEEEEEEEeCCCCC-CCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEE
Confidence 999999999998654 459999999999987531 12 33478999999999999
Q ss_pred EEEEeCCCCCCceEEEEEeeccC
Q 009358 273 ILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 273 v~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
|.++++..+ |.|++|||.+..
T Consensus 558 i~~~~~~~p--G~w~~HCHil~H 578 (612)
T 2g23_A 558 VMGKFDGAY--GRFMYHCHLLEH 578 (612)
T ss_dssp EEEECCSCC--EEEEEEESSHHH
T ss_pred EEEEeCCCC--ccEEEEeCchhH
Confidence 999999333 999999997654
No 57
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.58 E-value=3.1e-13 Score=145.67 Aligned_cols=245 Identities=10% Similarity=0.071 Sum_probs=149.1
Q ss_pred eEEEEEcCcCC--------CceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCCc----ccccccCCCCeE
Q 009358 48 KSIITVNGQFP--------GPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQSY 114 (537)
Q Consensus 48 ~~~~~~NG~~P--------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~----vtq~~i~PG~~~ 114 (537)
...++|||+.. -|+|.|++|+++|+||.|... ....+|++|..+.... .||.+- +....|.||||+
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 45789999973 379999999999999999984 4678999887655443 699752 345669999999
Q ss_pred EEEEEeCCCccceEEecch--hhh---h-ccceeeEEEcCCCCCCCCCCC----CC----CceeE-EeeeeeccChH--H
Q 009358 115 VYNFTISGQRGTLFWHAHI--SWL---R-ATVYGPLVIFPKRGVPYPFPK----PY----KEVPI-IFGEWFNADTE--A 177 (537)
Q Consensus 115 ~y~f~~~~~~Gt~wYH~h~--~~~---~-~Gl~G~liV~~~~~~~~~~~~----~d----~e~~l-~l~d~~~~~~~--~ 177 (537)
+..+++.+.+|.||..... ... . .....+++.........|... .+ .+..+ -+......... .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999985557999988875 211 1 111123333221111111000 00 00000 00000000000 0
Q ss_pred HHHHhh--cCCCCCCCCCcEEEcCccCCCc-ccC-------C-----CCcceEEEeCCcEEEEEEEecCC----CCceee
Q 009358 178 IINQSL--QTGAGPNVSDAYTINGLPGPLY-NCS-------A-----KDTFKLKVKPGKTYLLRLINAAL----NDELFF 238 (537)
Q Consensus 178 ~~~~~~--~~g~~~~~~~~~liNG~~~~~~-~~~-------~-----~~~~~~~v~~G~~~rlRliN~~~----~~~~~~ 238 (537)
.....+ ...........+.|||+.+... .-. + .....+.++.++.+++-++|... ...+.|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000 0000001124689999975311 000 0 01235788777777766666643 455669
Q ss_pred EEcCCeEEEEEecC---------CCc------------CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccCC
Q 009358 239 SIANHSVTVVDVDA---------IYI------------KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYATG 296 (537)
Q Consensus 239 ~i~gh~~~via~DG---------~~v------------~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~~ 296 (537)
|||||.|+|++.++ ... .|...|++.|.+|+++.|.++++++ |.|++|||.....
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNP---G~W~~HCHil~H~ 509 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNP---GAWLFHCHIAWHV 509 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSC---EEEEEEECCHHHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCC---eeEEEEecchhHh
Confidence 99999999999987 321 4678999999999999999999998 9999999986543
No 58
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.57 E-value=5e-14 Score=147.78 Aligned_cols=231 Identities=13% Similarity=0.092 Sum_probs=152.2
Q ss_pred EEEEEEEEEEEEee-------------cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEe--cC---cc
Q 009358 30 RHYKFDIKMQNVTR-------------LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHW--HG---IR 90 (537)
Q Consensus 30 ~~~~l~~~~~~~~~-------------~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~--HG---~~ 90 (537)
+++-|.++.-.... .|.....++|||+. .|+|.|++| ++|+||.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 66777776543322 13345689999997 599999999 99999999984 5678999 77 44
Q ss_pred ccCCCCCCCCCc-----ccccccCCCCeEEEEEEeCCCccceEEecchhhhh-c---cc----------eeeE--EEcCC
Q 009358 91 QLLSGWADGPAY-----ITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR-A---TV----------YGPL--VIFPK 149 (537)
Q Consensus 91 ~~~~~~~DGv~~-----vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~-~---Gl----------~G~l--iV~~~ 149 (537)
..... .||.+- +....|.||||++..+++ . .|.||..++..... . ++ ...+ .+...
T Consensus 216 ~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRLIA-VDQGFLARPIEVRALFLAPAERAEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEEEE-eCCCccCCceEeceEEECCcceEEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 33322 699642 334569999999999998 4 47889887643211 0 01 1111 12111
Q ss_pred CCC--CCCCC-------CCCCceeEEeeeeeccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEE-EeC
Q 009358 150 RGV--PYPFP-------KPYKEVPIIFGEWFNADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLK-VKP 219 (537)
Q Consensus 150 ~~~--~~~~~-------~~d~e~~l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~-v~~ 219 (537)
... +..+. ....+..+.+.. + ...|.|||+.+.. ..+.+. ++.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~ 345 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL----------------S-----GMQWTINGMFWNA------SNPLFEHVSV 345 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE----------------E-----TTEEEETTBCCCT------TCTTCCCEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC----------------C-----CceeeECCCcCCC------CCCceeccCC
Confidence 110 00000 000111111110 0 1258999997632 234566 899
Q ss_pred CcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCc------------Cc---eEecEEEECCcceEEEEEEeC---CCC
Q 009358 220 GKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI------------KS---FQTDILLITPGQTTNILLKAK---PSY 281 (537)
Q Consensus 220 G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v------------~P---~~~d~v~l~pGeR~dv~v~~~---~~~ 281 (537)
|++++|+|.|.+....+.||||||.|+|++.+|... .| ...|++.|.||+++.|.+++. ..
T Consensus 346 g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ad- 424 (448)
T 3aw5_A 346 EGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRG- 424 (448)
T ss_dssp CEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTT-
T ss_pred CCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCC-
Confidence 999999999998334455999999999999999764 23 589999999999999998886 44
Q ss_pred CCceEEEEEeeccC
Q 009358 282 PNATFLMSARPYAT 295 (537)
Q Consensus 282 ~~g~y~i~~~~~~~ 295 (537)
..|++|||.+..
T Consensus 425 --npw~~HCHil~H 436 (448)
T 3aw5_A 425 --QLFPFHCHNLEH 436 (448)
T ss_dssp --CEEEEEESSHHH
T ss_pred --CcEEEEcCChHH
Confidence 239999997543
No 59
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.56 E-value=3.3e-14 Score=142.24 Aligned_cols=195 Identities=12% Similarity=0.072 Sum_probs=126.9
Q ss_pred CcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCC----------
Q 009358 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPS---------- 280 (537)
Q Consensus 211 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~---------- 280 (537)
+.|+|+++.|++++++|.|.... ...+|.||..+.- +.||.+. ..-.|.||++++..+++..+
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccC
Confidence 46789999999999999998754 4569999976543 5688754 12238899999998887532
Q ss_pred CCCceEEEEEeeccCCCCCC-CCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 009358 281 YPNATFLMSARPYATGQGTF-DNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (537)
Q Consensus 281 ~~~g~y~i~~~~~~~~~~~~-~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (537)
...|.||.|||......... -.....+.|-...... +
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-------------------------------------~----- 150 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-------------------------------------V----- 150 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-------------------------------------B-----
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeecccc-------------------------------------c-----
Confidence 11389999999532211000 0012233333321110 0
Q ss_pred CCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCCCCcccccC
Q 009358 360 PANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFNY 439 (537)
Q Consensus 360 p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~~ 439 (537)
..|+.+.+.++ .|++|+..+. .
T Consensus 151 ------~~d~e~~l~~~---------------------d~t~Ng~~~~-----------------------~-------- 172 (313)
T 3tas_A 151 ------LPDRTHTIVFN---------------------DMTINNRPAH-----------------------T-------- 172 (313)
T ss_dssp ------CCSEEEEEEEE---------------------TTEETTCCTT-----------------------C--------
T ss_pred ------cccccceeecc---------------------chhcccCCcc-----------------------c--------
Confidence 01344444331 1567775331 0
Q ss_pred CCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceEE
Q 009358 440 TGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTVG 519 (537)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv~ 519 (537)
...+.++.|+.|+|+|.|.+ ...||||||||.|+|++.+.. ......|.++||+.
T Consensus 173 -------------~~~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~---------~~~~~~~~~~Dtv~ 227 (313)
T 3tas_A 173 -------------GPDFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGML---------TGPDDPSQVIDNKI 227 (313)
T ss_dssp -------------CCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSC---------CSTTCCCCEESEEE
T ss_pred -------------ccccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCc---------cCCCCCCeeeeEEE
Confidence 12357789999999999965 478999999999999987522 12235678999999
Q ss_pred eCCCCEEEEEE---EecCCCC
Q 009358 520 VPSGGWVAIRF---RADNPGD 537 (537)
Q Consensus 520 vp~~g~~viRf---~adNPG~ 537 (537)
|.+++...++| +++|||.
T Consensus 228 l~Pger~~v~v~a~~~~nPG~ 248 (313)
T 3tas_A 228 CGPADSFGFQVIAGEGVGAGA 248 (313)
T ss_dssp ECTTCEEEEEEETTTTTCSEE
T ss_pred eCCCcceEEEEEeccCCCCEe
Confidence 99998776665 4568984
No 60
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.56 E-value=1.5e-15 Score=126.71 Aligned_cols=89 Identities=20% Similarity=0.195 Sum_probs=70.0
Q ss_pred cCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCC--CCCCCCcccccccCCCCeEEEEEEeCCCccceEEecch
Q 009358 56 QFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSG--WADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI 133 (537)
Q Consensus 56 ~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~--~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~ 133 (537)
++++|+|++++||+|+ ++|.+..++++||||....... .+||.+ .+++.|.||++++|+|.+++++|+||||||.
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECTT
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeCC
Confidence 5678999999999975 5799888999999998754310 123332 3567899999999999865689999999993
Q ss_pred hhhhccceeeEEEcC
Q 009358 134 SWLRATVYGPLVIFP 148 (537)
Q Consensus 134 ~~~~~Gl~G~liV~~ 148 (537)
+ ..+||.|.|+|++
T Consensus 92 H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 92 H-RGAGMVGKITVEG 105 (105)
T ss_dssp T-GGGTCEEEEEECC
T ss_pred c-hhcCCEEEEEEcC
Confidence 3 2479999999974
No 61
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.52 E-value=5.6e-14 Score=150.13 Aligned_cols=220 Identities=13% Similarity=0.102 Sum_probs=139.7
Q ss_pred eeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEecCc-cccCCCCCCCCC----c-ccccccCCCCeEEEEEE
Q 009358 47 TKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHGI-RQLLSGWADGPA----Y-ITQCPIQTGQSYVYNFT 119 (537)
Q Consensus 47 ~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~-~~~~~~~~DGv~----~-vtq~~i~PG~~~~y~f~ 119 (537)
....++|||+. .|.|.|+.| ++|+||.|... ....+|++|. .+.... .||.+ . +....|.||||++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc-cCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34679999997 599999885 99999999985 4578888776 443332 69943 1 34567999999999999
Q ss_pred eCCCccceEE-ecchh--hhh-ccceeeEE-EcCCC--CC--CCCCCCCC------------CceeEEeeeeeccChHHH
Q 009358 120 ISGQRGTLFW-HAHIS--WLR-ATVYGPLV-IFPKR--GV--PYPFPKPY------------KEVPIIFGEWFNADTEAI 178 (537)
Q Consensus 120 ~~~~~Gt~wY-H~h~~--~~~-~Gl~G~li-V~~~~--~~--~~~~~~~d------------~e~~l~l~d~~~~~~~~~ 178 (537)
+.+.+|.++. ..... ... .+...+|+ ..... .. ....+... .+..+.+....
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~------- 378 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQ------- 378 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEE-------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeec-------
Confidence 8544677332 11110 000 01112222 21111 00 00000000 01111111100
Q ss_pred HHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCC-----
Q 009358 179 INQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAI----- 253 (537)
Q Consensus 179 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~----- 253 (537)
. ......++|||+.+. ....+.++.|++++|+|+|.+... +.||||||.|+|++.+|.
T Consensus 379 ------~---~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~~~~-HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 379 ------D---EYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPTRGT-HPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp ------C---TTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECSSSC-EEEEESSCCEEEEEEEEBCHHHH
T ss_pred ------C---CCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCCCCC-cCEeEeCceEEEEEecCcccccc
Confidence 0 001125789999752 234568999999999999998654 559999999999998751
Q ss_pred ----------C-c-----CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 254 ----------Y-I-----KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 254 ----------~-v-----~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
+ . +|...|++.|.||+++.|.++++..+ |.|++|||....
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnp--G~w~~HCHil~H 497 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYS--GRYVWHCHALEH 497 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCC--EEEEEEESCHHH
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCC--CCEEEEcCChhh
Confidence 1 0 23578999999999999999995433 999999998654
No 62
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.51 E-value=3.1e-13 Score=144.55 Aligned_cols=261 Identities=13% Similarity=0.088 Sum_probs=154.5
Q ss_pred EEEEEEEEEEEEeecC-----------eeeEEEEEcCcCCCceEEEecCCEEEEEEEecCC-CCceeEecC-------cc
Q 009358 30 RHYKFDIKMQNVTRLC-----------HTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVP-NNISIHWHG-------IR 90 (537)
Q Consensus 30 ~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG-------~~ 90 (537)
+++.|.++.-....+| .....++|||+. .|.|.|+.| ++|+||.|... ....++++| ..
T Consensus 172 ~d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~ 249 (534)
T 3abg_A 172 FDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLP 249 (534)
T ss_dssp HSCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCC
T ss_pred ceEEEEEeeeeecCCCceeccCCCCccccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCcc
Confidence 3455666654444333 234679999986 699999985 99999999984 556888865 32
Q ss_pred ccCCCCCCCCC-----cccccccCCCCeEEEEEEeCCCcc-ceEEecchhhh--------hccceeeEEEcCCCCCCCCC
Q 009358 91 QLLSGWADGPA-----YITQCPIQTGQSYVYNFTISGQRG-TLFWHAHISWL--------RATVYGPLVIFPKRGVPYPF 156 (537)
Q Consensus 91 ~~~~~~~DGv~-----~vtq~~i~PG~~~~y~f~~~~~~G-t~wYH~h~~~~--------~~Gl~G~liV~~~~~~~~~~ 156 (537)
+.... .||.. .+....|.||||++..+++.+.+| +||........ .....+.+-.........+.
T Consensus 250 ~~vIa-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 328 (534)
T 3abg_A 250 FKVIA-SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD 328 (534)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC
T ss_pred EEEEE-eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC
Confidence 22222 68852 244567999999999999855478 58766532100 00111222221111100000
Q ss_pred CCCCCceeEEeeeee-ccChHHHHHHhhcCCCCCCCCCcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCc
Q 009358 157 PKPYKEVPIIFGEWF-NADTEAIINQSLQTGAGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDE 235 (537)
Q Consensus 157 ~~~d~e~~l~l~d~~-~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~ 235 (537)
. ...+..+...- ....... ......+ .....|+|||+.+... .....++++.|++++|.|.|.+....
T Consensus 329 ~---~~~P~~L~~~~~p~~~~~~-~~~~~~~---~~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~ 397 (534)
T 3abg_A 329 T---SVVPANLRDVPFPSPTTNT-PRQFRFG---RTGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWT 397 (534)
T ss_dssp C---CCCCCCCCCCSCCCCCCCC-CEEEECS---CCCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCC
T ss_pred C---CCCccccccCCCCCCcccc-ceEEEEe---ccCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCC
Confidence 0 00000000000 0000000 0000000 0123578999975311 11234689999999999999986545
Q ss_pred eeeEEcCCeEEEEEe-cCC---CcCc---eEecEEEECCcceEEEEEE-eCCCCCCceEEEEEeeccCCCCCCCCcceEE
Q 009358 236 LFFSIANHSVTVVDV-DAI---YIKS---FQTDILLITPGQTTNILLK-AKPSYPNATFLMSARPYATGQGTFDNSTVAG 307 (537)
Q Consensus 236 ~~~~i~gh~~~via~-DG~---~v~P---~~~d~v~l~pGeR~dv~v~-~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~a 307 (537)
+.||||||.|+|++. +|. ...+ ...|++.|.||+++.|.++ ++++ |.|++|||.+.... ....+
T Consensus 398 HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnp---G~w~~HCHil~H~d-----~GMm~ 469 (534)
T 3abg_A 398 HPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFP---GVYMFHCHNLIHED-----HDMMA 469 (534)
T ss_dssp CCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCC---EEEEEEESCHHHHH-----TTCEE
T ss_pred cCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCC---ccEEEecChHHHHh-----cCCce
Confidence 669999999999998 664 1122 4689999999999999998 6776 99999999865432 23455
Q ss_pred EEEEe
Q 009358 308 ILEYE 312 (537)
Q Consensus 308 il~Y~ 312 (537)
.+.+.
T Consensus 470 ~~~V~ 474 (534)
T 3abg_A 470 AFNAT 474 (534)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 55654
No 63
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.51 E-value=6.8e-15 Score=146.85 Aligned_cols=86 Identities=15% Similarity=0.080 Sum_probs=65.6
Q ss_pred EEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC----ceEecEEEECCcce
Q 009358 195 YTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK----SFQTDILLITPGQT 270 (537)
Q Consensus 195 ~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~v~l~pGeR 270 (537)
.++||.++ |+|+++.|+++++||+|... ....+|.||..+.. +.||.+.. +...+...|.||||
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 45787654 58999999999999999874 55668888887432 68998652 22334577999999
Q ss_pred EEEEEEeCCCC-------CCceEEEEEee
Q 009358 271 TNILLKAKPSY-------PNATFLMSARP 292 (537)
Q Consensus 271 ~dv~v~~~~~~-------~~g~y~i~~~~ 292 (537)
++..++++++. ..|+||+|+|.
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~ 148 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYV 148 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCS
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccC
Confidence 99999998752 12799999994
No 64
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.48 E-value=1.6e-13 Score=150.85 Aligned_cols=226 Identities=10% Similarity=0.101 Sum_probs=122.1
Q ss_pred CcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC---c-eEecEEEECCcceEEEEEEeCCCC---CC
Q 009358 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK---S-FQTDILLITPGQTTNILLKAKPSY---PN 283 (537)
Q Consensus 211 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~---P-~~~d~v~l~pGeR~dv~v~~~~~~---~~ 283 (537)
..|+|+++.|+++++||.|.... ...+|.||.... .+.||.+.. | ..+....|.|||+++..+++++.. +.
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 45789999999999999999864 456899988765 478998642 2 223456799999999999998742 12
Q ss_pred c----eEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCcccccccccccccccCCCC
Q 009358 284 A----TFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRLRSLANAQF 359 (537)
Q Consensus 284 g----~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 359 (537)
| +||.|+|...... ....+. .++|....... ... +..|. .+..... ....+.....-.+
T Consensus 145 G~~c~T~wYHsH~~~~~q-~~~GL~-G~lIV~~~~~~-----------~~~--~~~~~-~~~e~~l-~l~~~d~~~~w~~ 207 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD-IHSGLI-GPLLICRKGTL-----------DKE--TNMPV-DMREFVL-LFMVFDEKKSWYY 207 (647)
T ss_dssp SCSEEEEEEECCSSHHHH-HTTTCE-EEEEEECTTSS-----------CTT--SCCCS-SCCEEEE-EEEEEEGGGSSCC
T ss_pred CCCceEEEEccCCCCccc-ccccCc-cCEEEeeCCCc-----------ccc--cCCCC-cceeEEE-EEEeecCcccccc
Confidence 6 9999999632110 011122 23333322110 000 01111 1111000 0000000000000
Q ss_pred CCCCCCCcceEEE-EEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCCCCCccccc
Q 009358 360 PANVPQTVNKRFF-FTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFPSTPLIKFN 438 (537)
Q Consensus 360 p~~~p~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~~~~p~~~~ 438 (537)
.... ...+. ..-.+. ...-.+.|||+.| +
T Consensus 208 ~~~~----~~~~~~~~~~~~---------------~~~~~~~iNG~~~--~----------------------------- 237 (647)
T 1sdd_B 208 DKKP----TRSWRRASSEVK---------------NSHEFHAINGMIY--N----------------------------- 237 (647)
T ss_dssp C----------------------------------CCCEEEEETTBSS--C-----------------------------
T ss_pred ccCc----ccccccCCcchh---------------hcCceeccCCEec--C-----------------------------
Confidence 0000 00000 000000 0012356777643 1
Q ss_pred CCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCCCCCccceE
Q 009358 439 YTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLIDPVERNTV 518 (537)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~~P~~RDTv 518 (537)
...+.++.|++|+|+|.|.+. ....||||+|||.|+|++. +|.++||+
T Consensus 238 --------------~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v 285 (647)
T 1sdd_B 238 --------------LPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLGVW 285 (647)
T ss_dssp --------------CCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEESSE
T ss_pred --------------CCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcccceE
Confidence 113467899999999999652 2358999999999999865 24589999
Q ss_pred EeCCCCEEEEEEEecCCCC
Q 009358 519 GVPSGGWVAIRFRADNPGD 537 (537)
Q Consensus 519 ~vp~~g~~viRf~adNPG~ 537 (537)
.|+||+.+.|+|+++|||.
T Consensus 286 ~l~pg~r~~v~~~~~~pG~ 304 (647)
T 1sdd_B 286 PLLPGSFKTLEMKASKPGW 304 (647)
T ss_dssp EECTTEEEEEEEECCSSEE
T ss_pred EECCCeEEEEEEEeccceE
Confidence 9999999999999999983
No 65
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.45 E-value=5.7e-13 Score=135.09 Aligned_cols=78 Identities=22% Similarity=0.247 Sum_probs=60.6
Q ss_pred CcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCC-CCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceE
Q 009358 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAAL-NDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (537)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~ 271 (537)
..+++||+. ..++|++++|+++++|++|... ...+.++++++.. +.||. +.. .|.|||++
T Consensus 60 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~---~~~----~i~PG~~~ 120 (340)
T 2bw4_A 60 HAMTFNGSV---------PGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGG---ALT----QVNPGEET 120 (340)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGG---GGC----CBCTTEEE
T ss_pred EEEEECCCC---------CCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCc---cce----EeCCCCEE
Confidence 689999983 2478999999999999999973 2345578887652 22333 221 39999999
Q ss_pred EEEEEeCCCCCCceEEEEEee
Q 009358 272 NILLKAKPSYPNATFLMSARP 292 (537)
Q Consensus 272 dv~v~~~~~~~~g~y~i~~~~ 292 (537)
++.++++++ |+||+|||.
T Consensus 121 ~y~~~~~~~---Gt~wyH~h~ 138 (340)
T 2bw4_A 121 TLRFKATKP---GVFVYHCAP 138 (340)
T ss_dssp EEEEECCSC---EEEEEECCC
T ss_pred EEEEECCCC---eEEEEEcCC
Confidence 999999885 999999996
No 66
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.43 E-value=7.4e-13 Score=111.68 Aligned_cols=105 Identities=19% Similarity=0.174 Sum_probs=80.2
Q ss_pred EEEEEEEEEEEEe-----ecCeeeEE-EEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcc
Q 009358 30 RHYKFDIKMQNVT-----RLCHTKSI-ITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI 103 (537)
Q Consensus 30 ~~~~l~~~~~~~~-----~~g~~~~~-~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~v 103 (537)
+.|.+.+.+.... .+|..... ..+|++++++.|++++||+|+++++|.... +||+.... .|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 4566666664432 34555444 488989988999999999999999999755 56655432 122
Q ss_pred cccccCCCCeEEEEEEeCCCccceEEecchhhhhccceeeEEEcC
Q 009358 104 TQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRATVYGPLVIFP 148 (537)
Q Consensus 104 tq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~Gl~G~liV~~ 148 (537)
+..+.||++++|.|.+ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 4679999999999996 899999999998776556999999964
No 67
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.42 E-value=1.2e-12 Score=137.65 Aligned_cols=222 Identities=13% Similarity=0.136 Sum_probs=136.1
Q ss_pred CcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCC-CceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceE
Q 009358 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (537)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~ 271 (537)
..+++||+. ..+.|+++.|+++++||.|.... ..+.+|+||+. ..||... ...|.||+++
T Consensus 49 ~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 679999985 25789999999999999999643 46679999975 3677532 2358999999
Q ss_pred EEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEecCCCCCCCcccccCCCCCCCCCCCCCCCccccccccccc
Q 009358 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYEAPAKFPRSSTVSIKKLPLMKPTLPALNDTAFAFNYTTRL 351 (537)
Q Consensus 272 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 351 (537)
++.++++++ |.||+|||...... .......+.|.+..... .|.+... .. -.+
T Consensus 110 ~y~f~~~~~---Gt~~yH~H~~~~~~--~~~~Gl~G~~iv~~~~~------------------~~~~d~e-~~----l~l 161 (442)
T 2zoo_A 110 TFNFKALNP---GLYIYHCATAPVGM--HIANGMYGLILVEPKEG------------------LAPVDRE-YY----LVQ 161 (442)
T ss_dssp EEEEECCSC---EEEEEECCCSSHHH--HHHTTCEEEEEEECTTC------------------CCCCSEE-EE----EEE
T ss_pred EEEEEcCCC---eEEEEecCCCChHH--HHhCccEEEEEEeCCCC------------------CCCCCce-EE----EEe
Confidence 999999886 99999997421100 00123345555542211 1111110 00 001
Q ss_pred ccccC-CCCCCCCCCCcceEEEEEeccCcCCCCCCCCccCCCCCceeEeeecCeeecCCChhhHHhhhcCCCCccccCCC
Q 009358 352 RSLAN-AQFPANVPQTVNKRFFFTVGLGTNPCPKNQTCQGPNNSTKFAASVNNFSFILPSTALLQAHFFGQNGVYTTDFP 430 (537)
Q Consensus 352 ~~l~~-~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~pll~~~~~~~~~~~~~~~~ 430 (537)
.+... ..+. .+ .... +..... .+.. . -.+.|||+.+-..
T Consensus 162 ~d~~~~~~~~--~~----~~~~--~~~~~~--------~~~~-~--~~~liNG~~~~~~--------------------- 201 (442)
T 2zoo_A 162 GDFYTKGEFG--EA----GLQP--FDMAKA--------IDED-A--DYVVFNGSVGSTT--------------------- 201 (442)
T ss_dssp EEECBSSCTT--CC----EEEC--BCHHHH--------HTTC-C--SEEEETTSTTTTS---------------------
T ss_pred eeeeccCccc--cc----cccc--CChhHh--------ccCC-C--CEEEECCCcCCCC---------------------
Confidence 11000 0000 00 0000 000000 0000 1 1345777633100
Q ss_pred CCCcccccCCCCCCCCCcccCCceEEEeeCCCEEEEEEeeCCCCCCCCCCccccCCCeeEEeecCCCCCCCCCCCCCCCC
Q 009358 431 STPLIKFNYTGTPPNNTSVMNGTKVVVLPFNASVELVMQDTSTLGAESHPLHLHGFNFFVIGQGFGNYDPSKDRKNFNLI 510 (537)
Q Consensus 431 ~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~veivi~N~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~~n~~ 510 (537)
....+.++.|+.|.|.|.|.+. ...|+||+|||.|.||+.. |. +.
T Consensus 202 ---------------------~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~D-G~-----------~~ 246 (442)
T 2zoo_A 202 ---------------------DENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVE-GG-----------SL 246 (442)
T ss_dssp ---------------------GGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGG-GS-----------SC
T ss_pred ---------------------CCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecC-Cc-----------cC
Confidence 0124678899999999999642 3689999999999999873 21 22
Q ss_pred CCCccceEEeCCCCEEEEEEEecCCC
Q 009358 511 DPVERNTVGVPSGGWVAIRFRADNPG 536 (537)
Q Consensus 511 ~P~~RDTv~vp~~g~~viRf~adNPG 536 (537)
.|.+.|++.|.+|+...|.|++++||
T Consensus 247 ~p~~~~~~~l~pg~r~~v~v~~~~~G 272 (442)
T 2zoo_A 247 KNHNVQTTLIPAGGAAIVEFKVEVPG 272 (442)
T ss_dssp EECSBSEEEECTTEEEEEEEECCSCE
T ss_pred CCccceEEEECCCeeEEEEEEcCCCC
Confidence 37899999999999999999999997
No 68
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.42 E-value=5.2e-13 Score=118.81 Aligned_cols=99 Identities=14% Similarity=0.134 Sum_probs=72.4
Q ss_pred cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCC------CCccc-ccccCCCC--eE
Q 009358 44 LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADG------PAYIT-QCPIQTGQ--SY 114 (537)
Q Consensus 44 ~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG------v~~vt-q~~i~PG~--~~ 114 (537)
.|...+.+.++|. ++|+|+|++||+|+|+++|... ...|.+.+....+++.+. +++.. ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3455556677776 5799999999999999999733 346666666554443221 11100 02689999 99
Q ss_pred EEEEEeCCCccceEEecchhhhh-ccceeeEEEc
Q 009358 115 VYNFTISGQRGTLFWHAHISWLR-ATVYGPLVIF 147 (537)
Q Consensus 115 ~y~f~~~~~~Gt~wYH~h~~~~~-~Gl~G~liV~ 147 (537)
+|.|++ ++|+||||||..++. +||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999994 899999999987776 8999999985
No 69
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.41 E-value=2.3e-11 Score=130.61 Aligned_cols=239 Identities=10% Similarity=0.027 Sum_probs=146.6
Q ss_pred eEEEEEcCcCC----------------CceEEEecCCEEEEEEEecCC-CCceeEecCccccCCCCCCCCC----ccccc
Q 009358 48 KSIITVNGQFP----------------GPRIVAREGDRLIIKVVNHVP-NNISIHWHGIRQLLSGWADGPA----YITQC 106 (537)
Q Consensus 48 ~~~~~~NG~~P----------------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~----~vtq~ 106 (537)
...++|||+.. .++|.|++|+++|+||.|... ....+|++|..+.... .||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 35688999842 379999999999999999984 4568888887655443 69975 23345
Q ss_pred ccCCCCeEEEEEEeCCCccceEEecchhh-----hhccceeeEEEcCCCCCCCCCCCC--CCceeEEeee--eeccCh--
Q 009358 107 PIQTGQSYVYNFTISGQRGTLFWHAHISW-----LRATVYGPLVIFPKRGVPYPFPKP--YKEVPIIFGE--WFNADT-- 175 (537)
Q Consensus 107 ~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~-----~~~Gl~G~liV~~~~~~~~~~~~~--d~e~~l~l~d--~~~~~~-- 175 (537)
.|.||||++..+++.+..|.||-.+.... ...+..-+|+.........|.... +.+. .+.+ ......
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 68999999999998666899999986532 112222344444322111111000 0000 0000 000000
Q ss_pred HHHHH-----HhhcCCCCCCCCCcEEEcCccCCC-cc---------cCC---CCcceEEE----eCCcEEEEEEEecC--
Q 009358 176 EAIIN-----QSLQTGAGPNVSDAYTINGLPGPL-YN---------CSA---KDTFKLKV----KPGKTYLLRLINAA-- 231 (537)
Q Consensus 176 ~~~~~-----~~~~~g~~~~~~~~~liNG~~~~~-~~---------~~~---~~~~~~~v----~~G~~~rlRliN~~-- 231 (537)
..+-. ..+..+ ....-.+.|||.++.. .. ... .....+.+ +.|+++.|.|-|.+
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 00000 000000 0012357789886521 00 000 01123344 35999999999987
Q ss_pred CCCceeeEEcCCeEEEEEecCC------------CcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 232 LNDELFFSIANHSVTVVDVDAI------------YIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 232 ~~~~~~~~i~gh~~~via~DG~------------~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
.. .+.||+|||+|+||+.+.. +..|...|++.+.+|+...+.++++++ |.|.+|||....
T Consensus 460 ~~-~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNP---G~W~~HCHi~~H 531 (580)
T 3sqr_A 460 GI-WHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP---GSWLLHCHIAWH 531 (580)
T ss_dssp CC-CEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSC---EEEEEEECSHHH
T ss_pred cc-ceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCC---eeeEEEECcHHH
Confidence 43 5569999999999998432 225788999999999999999999998 999999997443
No 70
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.39 E-value=1.5e-13 Score=152.48 Aligned_cols=74 Identities=11% Similarity=0.038 Sum_probs=58.2
Q ss_pred CcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCC---------CC
Q 009358 211 DTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKP---------SY 281 (537)
Q Consensus 211 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~---------~~ 281 (537)
..|+|+++.|++++++|.|... ....+|.||..+..-.-||.+- ....|.||++++..+++++ ..
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 3578999999999999999975 4566899988765544358742 1245899999999999884 33
Q ss_pred CCceEEEEEee
Q 009358 282 PNATFLMSARP 292 (537)
Q Consensus 282 ~~g~y~i~~~~ 292 (537)
|.||.|+|.
T Consensus 271 --Gt~wYHsh~ 279 (770)
T 2r7e_B 271 --KAWAYSSDV 279 (770)
T ss_dssp --EEEEECCCS
T ss_pred --eeEEeeccC
Confidence 999999996
No 71
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.29 E-value=9.2e-11 Score=128.42 Aligned_cols=93 Identities=14% Similarity=0.130 Sum_probs=73.4
Q ss_pred CcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCc-----------------
Q 009358 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYI----------------- 255 (537)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v----------------- 255 (537)
..+.+||+.+. ....+.++.|++++|.|+|.+...|. ||||||.|+||+.+|...
T Consensus 459 ~~~~~n~~~~~-------~~~~~~~~~g~~~~w~i~N~~~~~HP-~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~ 530 (612)
T 3gyr_A 459 KTYRRTARTFN-------DGLGFTIGEGTHEQWTFLNLSPILHP-MHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLD 530 (612)
T ss_dssp EEEEEEECSTT-------SCCCEEEETTCEEEEEEEECSSSCEE-EEESSCEEEEEEEEEEECTTEETTTTEESSCEEEE
T ss_pred ccccccCccCC-------CCcceEeCCCCEEEEEEEcCCCCCcC-EeECCCcEEEEeecCCcCccccccccccccccccc
Confidence 35667776542 34568899999999999999976655 999999999998776321
Q ss_pred ----------CceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeeccC
Q 009358 256 ----------KSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPYAT 295 (537)
Q Consensus 256 ----------~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~~~ 295 (537)
++-..|++.|.+|+.+.|.+++...+ |.|++|||.+..
T Consensus 531 ~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnp--G~w~~HCHil~H 578 (612)
T 3gyr_A 531 PDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAY--GRFMYHCHLLEH 578 (612)
T ss_dssp EEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCC--EEEEEEESSHHH
T ss_pred cccccCcccccCCCCcEEEECCCCEEEEEEEeCCCC--cceEEcCCChHH
Confidence 23358999999999999999954433 999999998654
No 72
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.27 E-value=1.1e-11 Score=131.86 Aligned_cols=96 Identities=17% Similarity=0.163 Sum_probs=75.2
Q ss_pred cCeeeEEEEEcCcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCC
Q 009358 44 LCHTKSIITVNGQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQ 123 (537)
Q Consensus 44 ~g~~~~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~ 123 (537)
+++...++++|+++|+|+|+|++||+|+++|+|.+...-. +||+.... .|+ ++.|.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4577889999999999999999999999999998643111 36655432 232 2579999999999997 89
Q ss_pred ccceEEecch-hhhh-ccceeeEEEcCCC
Q 009358 124 RGTLFWHAHI-SWLR-ATVYGPLVIFPKR 150 (537)
Q Consensus 124 ~Gt~wYH~h~-~~~~-~Gl~G~liV~~~~ 150 (537)
+|+||||||. .+.. .||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 9999999993 2222 5999999999764
No 73
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.26 E-value=1.7e-10 Score=116.70 Aligned_cols=78 Identities=26% Similarity=0.274 Sum_probs=61.4
Q ss_pred CcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCC-CceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceE
Q 009358 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (537)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~ 271 (537)
..+++||+. ..++|+++.|+++++|+.|.... ..+.+|+|++.. .||.. +. . .|.||+++
T Consensus 54 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~ 114 (336)
T 1oe1_A 54 QAMTFNGSM---------PGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQA 114 (336)
T ss_dssp EEEEETTBS---------SCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEE
Confidence 679999983 35789999999999999998742 445689998763 23331 11 1 39999999
Q ss_pred EEEEEeCCCCCCceEEEEEee
Q 009358 272 NILLKAKPSYPNATFLMSARP 292 (537)
Q Consensus 272 dv~v~~~~~~~~g~y~i~~~~ 292 (537)
+..++++++ |+||+|||.
T Consensus 115 ~y~f~~~~~---Gt~~yH~h~ 132 (336)
T 1oe1_A 115 TLRFKADRS---GTFVYHCAP 132 (336)
T ss_dssp EEEEECCSC---EEEEEECCC
T ss_pred EEEEECCCC---eEEEEecCC
Confidence 999999885 999999995
No 74
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.26 E-value=4.4e-11 Score=120.75 Aligned_cols=79 Identities=23% Similarity=0.241 Sum_probs=58.2
Q ss_pred CcEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCC-CceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceE
Q 009358 193 DAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN-DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (537)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~ 271 (537)
..+++||+. ..++|++++|+++++|++|.+.. ..+.++++++. ..||. .+. . .|.||+++
T Consensus 53 ~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~--~~~--~--~i~PG~~~ 113 (333)
T 1mzy_A 53 QAMTFDGSI---------PGPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGG--GGL--T--LINPGEKV 113 (333)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGG--GGG--C--CBCTTEEE
T ss_pred EEEEECCcc---------CCCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCC--Cce--e--EeCCCCEE
Confidence 678999984 35789999999999999999642 22345666542 12222 121 1 39999999
Q ss_pred EEEEEeCCCCCCceEEEEEeec
Q 009358 272 NILLKAKPSYPNATFLMSARPY 293 (537)
Q Consensus 272 dv~v~~~~~~~~g~y~i~~~~~ 293 (537)
++.++++++ |.||+|||..
T Consensus 114 ~y~f~~~~~---Gt~~yH~h~~ 132 (333)
T 1mzy_A 114 VLRFKATRA---GAFVYHCAPG 132 (333)
T ss_dssp EEEEECCSC---EEEEEECCCS
T ss_pred EEEEECCCC---EEEEEeecCC
Confidence 999999876 9999999963
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.20 E-value=4.4e-11 Score=99.43 Aligned_cols=78 Identities=19% Similarity=0.280 Sum_probs=62.6
Q ss_pred CcCCCceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchh
Q 009358 55 GQFPGPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHIS 134 (537)
Q Consensus 55 G~~PgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~ 134 (537)
..+..+.|++++||+|++ +|....++++|+++. +||.....+..|.||++++|.| +++|+|||||+.+
T Consensus 28 ~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H 95 (105)
T 2ov0_A 28 MKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPH 95 (105)
T ss_dssp TEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC
T ss_pred cEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCC
Confidence 344458999999999655 699888899998852 3566555556799999999988 4799999999886
Q ss_pred hhhccceeeEEEc
Q 009358 135 WLRATVYGPLVIF 147 (537)
Q Consensus 135 ~~~~Gl~G~liV~ 147 (537)
. ||.|.|+|+
T Consensus 96 ~---gM~G~i~V~ 105 (105)
T 2ov0_A 96 P---FMRGKVVVE 105 (105)
T ss_dssp T---TCEEEEEEC
T ss_pred C---CCEEEEEEC
Confidence 5 999999985
No 76
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.97 E-value=1e-09 Score=91.23 Aligned_cols=83 Identities=13% Similarity=0.168 Sum_probs=60.7
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCC----cccccccCCCCeEEEEEEeCCCccceEEecchhh
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW 135 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~----~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~ 135 (537)
+.|++++||+|++ +|.....+++|+|+..... .+|.. ......+.||++++|.|++++++|+|||||| ..
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~H 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-PH 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-TT
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-Ch
Confidence 7999999999755 5887678888888754321 12310 0122458999999999985478999999999 22
Q ss_pred hhccceeeEEEcC
Q 009358 136 LRATVYGPLVIFP 148 (537)
Q Consensus 136 ~~~Gl~G~liV~~ 148 (537)
...||.|.|+|.+
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 3379999999964
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.87 E-value=9.3e-09 Score=89.89 Aligned_cols=88 Identities=11% Similarity=0.092 Sum_probs=63.9
Q ss_pred CceEEEecCCEEEEEEEecCCC-CceeEecCcccc--------C------CCCC-CCCCc--ccccccCCCCeEEEEEEe
Q 009358 59 GPRIVAREGDRLIIKVVNHVPN-NISIHWHGIRQL--------L------SGWA-DGPAY--ITQCPIQTGQSYVYNFTI 120 (537)
Q Consensus 59 gP~i~v~~Gd~v~v~v~N~l~~-~~siH~HG~~~~--------~------~~~~-DGv~~--vtq~~i~PG~~~~y~f~~ 120 (537)
-+.|+|++||+|+++++|.... .++++.|+.... . ..+. ++.+. .....|.||+++++.|++
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~ 113 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA 113 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC
T ss_pred CCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC
Confidence 3799999999999999999776 788888874210 0 0000 01110 011248999999999996
Q ss_pred CCCccceEEecchhhhhccceeeEEEc
Q 009358 121 SGQRGTLFWHAHISWLRATVYGPLVIF 147 (537)
Q Consensus 121 ~~~~Gt~wYH~h~~~~~~Gl~G~liV~ 147 (537)
+++|+|+||||..+...||.|.|+|+
T Consensus 114 -~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 114 -PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp -CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred -CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 78999999999765444999999984
No 78
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.76 E-value=7.3e-08 Score=84.24 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=63.0
Q ss_pred ceEEEecCCEEEEEEEe--cCCCCceeEecCcc------------ccC-CCC---CCCCCcc-cccccCCCCeEEEEEEe
Q 009358 60 PRIVAREGDRLIIKVVN--HVPNNISIHWHGIR------------QLL-SGW---ADGPAYI-TQCPIQTGQSYVYNFTI 120 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N--~l~~~~siH~HG~~------------~~~-~~~---~DGv~~v-tq~~i~PG~~~~y~f~~ 120 (537)
+.|+|+.||+|+++++| .....++++.+... ... ..+ .|....+ ....|.||++.++.|.+
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~~ 112 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRT 112 (140)
T ss_dssp SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEEC
T ss_pred CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEEe
Confidence 79999999999999999 66677887777321 000 000 0110000 01358999999999997
Q ss_pred CCCccceEEecchhhhh-ccceeeEEEcC
Q 009358 121 SGQRGTLFWHAHISWLR-ATVYGPLVIFP 148 (537)
Q Consensus 121 ~~~~Gt~wYH~h~~~~~-~Gl~G~liV~~ 148 (537)
+.+|+|||||+..+.. .||.|.|+|.|
T Consensus 113 -~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 113 -PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp -CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred -CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 7899999999986555 79999999974
No 79
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.71 E-value=4e-08 Score=80.56 Aligned_cols=73 Identities=8% Similarity=0.032 Sum_probs=58.9
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
..|++++||+|++.++|.....+++...+.... ..+.||++.++.|+. +++|+|.|+|..+. ..|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~H~-~~g 92 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRYHL-LKG 92 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcccc-CCC
Confidence 689999999999999999777766666554321 247899999999995 89999999997432 269
Q ss_pred ceeeEEEc
Q 009358 140 VYGPLVIF 147 (537)
Q Consensus 140 l~G~liV~ 147 (537)
|.|.|+|+
T Consensus 93 M~G~i~Ve 100 (100)
T 4hci_A 93 MEGKVIVK 100 (100)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999995
No 80
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.71 E-value=3.5e-08 Score=85.19 Aligned_cols=73 Identities=14% Similarity=0.199 Sum_probs=54.3
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
+.|++++||+|++ +|....++++++.... +|........+.||++++|.| +++|+|+|||-.|. |
T Consensus 60 ~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~---g 124 (132)
T 3c75_A 60 PEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---F 124 (132)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---T
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc---C
Confidence 7999999999765 5887767777765321 222222233589999999988 46899999997754 9
Q ss_pred ceeeEEEc
Q 009358 140 VYGPLVIF 147 (537)
Q Consensus 140 l~G~liV~ 147 (537)
|.|.|+|+
T Consensus 125 M~G~I~V~ 132 (132)
T 3c75_A 125 MRGKVIVE 132 (132)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999985
No 81
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.61 E-value=1.4e-07 Score=76.95 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=57.4
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCC----cccccccCCCCeEEEEEEeCCCccceEEecchhh
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA----YITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW 135 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~----~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~ 135 (537)
+.|++++||+|+ ++|....++++|+|+.... +|.. ......+.||+++++.|. ++|+|+|||+.+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H- 86 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH- 86 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-
Confidence 689999999876 5788777899999975432 2211 011235899999999884 689999999932
Q ss_pred hhccceeeEEEc
Q 009358 136 LRATVYGPLVIF 147 (537)
Q Consensus 136 ~~~Gl~G~liV~ 147 (537)
...||.|.|+|+
T Consensus 87 ~~~gM~G~i~V~ 98 (98)
T 2plt_A 87 QGAGMVGKIIVQ 98 (98)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 336999999984
No 82
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.59 E-value=1.2e-07 Score=77.36 Aligned_cols=80 Identities=16% Similarity=0.181 Sum_probs=55.8
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
+.|++++||+|++ +|.....++++.++....+.. .++.. .....+.||+++++.| +++|+|+|||+.+ ...|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6899999998765 587667888888864321000 00000 1124589999999988 4699999999932 3379
Q ss_pred ceeeEEEc
Q 009358 140 VYGPLVIF 147 (537)
Q Consensus 140 l~G~liV~ 147 (537)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 83
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.56 E-value=1.8e-07 Score=75.02 Aligned_cols=73 Identities=18% Similarity=0.252 Sum_probs=54.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
+.|++++||+|++ +|.....++++.++... + + .....+.||+++++.| +++|+|||||+.+ ...|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~--~---~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H-~~~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----L--S---HKDLAFSPGETFEATF---SEPGTYTYYCEPH-RGAG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGG----G--C---EEEEECSTTCEEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCc----c--C---cccceeCCCCEEEEEe---CCCEEEEEEeCCC-ccCC
Confidence 6899999999765 58766788888887311 0 0 1224589999998887 5699999999933 2359
Q ss_pred ceeeEEEc
Q 009358 140 VYGPLVIF 147 (537)
Q Consensus 140 l~G~liV~ 147 (537)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 84
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.54 E-value=6.1e-07 Score=76.09 Aligned_cols=75 Identities=11% Similarity=0.073 Sum_probs=52.0
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
..|+|++||+|++.++|. ++++..+. ..+-+|. ...-+.||++++|.| +.+|+|||+|..+ ...|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~-----~~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H-~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIK-----EILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECT-----TSSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcC-----CcCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 699999999987777662 33333332 1112332 122357999999998 4689999999843 2379
Q ss_pred ceeeEEEcCC
Q 009358 140 VYGPLVIFPK 149 (537)
Q Consensus 140 l~G~liV~~~ 149 (537)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999974
No 85
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.50 E-value=1.9e-07 Score=75.91 Aligned_cols=77 Identities=16% Similarity=0.234 Sum_probs=54.5
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcc--cccccCCCCeEEEEEEeCCCccceEEecchhhhh
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYI--TQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLR 137 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~v--tq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~ 137 (537)
+.|++++||+| +++|.....++++.++.... +|..+. ....+.||+++++.| +++|+|+|||+.+ ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 68999999985 55687666777777764321 111110 123589999999987 5799999999932 23
Q ss_pred ccceeeEEEc
Q 009358 138 ATVYGPLVIF 147 (537)
Q Consensus 138 ~Gl~G~liV~ 147 (537)
.||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 86
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.46 E-value=4.6e-07 Score=74.39 Aligned_cols=82 Identities=12% Similarity=0.044 Sum_probs=54.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCC--CCCCCCCcc--cccccCCCCeEEEEEEeCCCccceEEecchhh
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLS--GWADGPAYI--TQCPIQTGQSYVYNFTISGQRGTLFWHAHISW 135 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~--~~~DGv~~v--tq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~ 135 (537)
+.|++++||+|+ ++|.....++++++.-..... ..++..+++ ....+.||+++++.| +++|+|+|||+ ..
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-~H 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-PH 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-TT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-CC
Confidence 789999999976 558866677777763110000 000000111 223589999999988 47999999999 22
Q ss_pred hhccceeeEEEc
Q 009358 136 LRATVYGPLVIF 147 (537)
Q Consensus 136 ~~~Gl~G~liV~ 147 (537)
...||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 337999999985
No 87
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.46 E-value=3.3e-07 Score=78.18 Aligned_cols=76 Identities=12% Similarity=0.163 Sum_probs=52.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
+.|+|++||+|++.+.|. ++++..+.- .+-+|.. ..-+.||++++|.| +.+|+|||||..+ ...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999977665553 333333311 1112321 12357999999888 4689999999854 3479
Q ss_pred ceeeEEEcCCC
Q 009358 140 VYGPLVIFPKR 150 (537)
Q Consensus 140 l~G~liV~~~~ 150 (537)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999864
No 88
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.43 E-value=8.5e-07 Score=72.36 Aligned_cols=77 Identities=10% Similarity=0.157 Sum_probs=54.8
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCc------ccccccCCCCeEEEEEEeCCCccceEEecch
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY------ITQCPIQTGQSYVYNFTISGQRGTLFWHAHI 133 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~------vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~ 133 (537)
+.|++++||+|+ ++|....+++++.++... -+|... .....+.||+++++.|. ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcCC
Confidence 699999999865 578876678887775422 122110 01134799999998874 79999999993
Q ss_pred hhhhccceeeEEEc
Q 009358 134 SWLRATVYGPLVIF 147 (537)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (537)
+ ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 237999999984
No 89
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.40 E-value=1e-06 Score=71.80 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=55.5
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCc------ccccccCCCCeEEEEEEeCCCccceEEecch
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY------ITQCPIQTGQSYVYNFTISGQRGTLFWHAHI 133 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~------vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~ 133 (537)
+.|++++||+| +++|.....+++|.++... .+|... .....+.||+++++.|. ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcCC
Confidence 68999999985 4578877788888886432 122210 11135789999999884 69999999993
Q ss_pred hhhhccceeeEEEc
Q 009358 134 SWLRATVYGPLVIF 147 (537)
Q Consensus 134 ~~~~~Gl~G~liV~ 147 (537)
+ ...||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 2 336999999984
No 90
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.33 E-value=1.3e-06 Score=73.97 Aligned_cols=75 Identities=11% Similarity=0.068 Sum_probs=51.9
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
..|+|++||+|++ +|.. .++++..+... +-+|. ....+.||++++|.| +.+|+|+|||-.+ ..+|
T Consensus 22 ~~i~V~~GDTV~f--~n~~-~~Hnv~~~~~~-----~p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKF--VPTD-KSHNAESVREV-----WPEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEEE--ECSS-SSCCCEECTTT-----SCTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECC-CCccEEEeCCc-----CCCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 6999999999654 4553 45555555211 11232 123467999999988 4689999999633 2369
Q ss_pred ceeeEEEcCC
Q 009358 140 VYGPLVIFPK 149 (537)
Q Consensus 140 l~G~liV~~~ 149 (537)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999875
No 91
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.25 E-value=5.5e-06 Score=68.45 Aligned_cols=73 Identities=14% Similarity=0.205 Sum_probs=51.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
..|+|++||+|++ +|.....+++....... |........+.||+++++.| +.+|+|+|+|-.+. |
T Consensus 34 ~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~---~ 98 (106)
T 1id2_A 34 PEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---F 98 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---T
T ss_pred CEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC---C
Confidence 6999999999765 48766555555543211 11111112478999999988 46899999998764 9
Q ss_pred ceeeEEEc
Q 009358 140 VYGPLVIF 147 (537)
Q Consensus 140 l~G~liV~ 147 (537)
|.|.|+|+
T Consensus 99 M~G~I~V~ 106 (106)
T 1id2_A 99 MRGKVIVE 106 (106)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 92
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.23 E-value=2.6e-06 Score=72.79 Aligned_cols=89 Identities=9% Similarity=-0.032 Sum_probs=58.5
Q ss_pred ceEEEecC-CEEEEEEEecCCCC-----ce--eEecCcccc-------CCCCCCCC----Cc-c-cccccCCCCeEEEEE
Q 009358 60 PRIVAREG-DRLIIKVVNHVPNN-----IS--IHWHGIRQL-------LSGWADGP----AY-I-TQCPIQTGQSYVYNF 118 (537)
Q Consensus 60 P~i~v~~G-d~v~v~v~N~l~~~-----~s--iH~HG~~~~-------~~~~~DGv----~~-v-tq~~i~PG~~~~y~f 118 (537)
..|.|++| |+|+|+|+|....+ ++ |--+|.... ...-++=+ +. + ...-|.||++.++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999999 99999999986432 33 332331100 00001101 11 0 112479999999999
Q ss_pred EeC--CCccceEEecchhhhhccceeeEEEcC
Q 009358 119 TIS--GQRGTLFWHAHISWLRATVYGPLVIFP 148 (537)
Q Consensus 119 ~~~--~~~Gt~wYH~h~~~~~~Gl~G~liV~~ 148 (537)
+++ .++|+|||.|...+.+.||.|.|+|.+
T Consensus 98 ~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 98 KVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred eccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 973 289999999987665558999999963
No 93
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.21 E-value=4.6e-06 Score=70.76 Aligned_cols=75 Identities=12% Similarity=0.134 Sum_probs=49.2
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
+.|+|++||+|++ +|... ++++..+ ...+-+|... ....||++++|.| +.+|+|+|+|..+. ..|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESI-----KDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY-AMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEEC-----TTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc-cCC
Confidence 7999999999755 55532 3443332 1111133211 2346899988888 46999999997422 269
Q ss_pred ceeeEEEcCC
Q 009358 140 VYGPLVIFPK 149 (537)
Q Consensus 140 l~G~liV~~~ 149 (537)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999874
No 94
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.19 E-value=7.1e-06 Score=66.68 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=53.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCc----ccccccCCCCeEEEEEEeCCCccceEEecchhh
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY----ITQCPIQTGQSYVYNFTISGQRGTLFWHAHISW 135 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~----vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~ 135 (537)
+.|++++||+|++ +|.....+++....-.. -+|... .....+.||+++++.| +++|+|+|+|..+.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 6999999999655 58766677776654211 123210 0112589999999988 47999999998632
Q ss_pred hhccceeeEEEc
Q 009358 136 LRATVYGPLVIF 147 (537)
Q Consensus 136 ~~~Gl~G~liV~ 147 (537)
.+||.|.|+|+
T Consensus 88 -~~gM~G~I~V~ 98 (98)
T 1iuz_A 88 -GAGMKMTITVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -cCCCEEEEEEC
Confidence 26999999984
No 95
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.16 E-value=4.5e-06 Score=70.83 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=50.0
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
+.|+|++||+|+ ++|... .+++..+ ...+-||... ..+.||++++|.| +.+|+|+|+|..+. ..|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETI-----KGMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPHY-MMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEEC-----TTSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTTT-TTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCcc-ccC
Confidence 799999999965 555532 4333332 1111233211 2357999988888 46899999997422 269
Q ss_pred ceeeEEEcCCC
Q 009358 140 VYGPLVIFPKR 150 (537)
Q Consensus 140 l~G~liV~~~~ 150 (537)
|.|.|+|.++.
T Consensus 86 M~G~I~V~~~~ 96 (123)
T 1pmy_A 86 MVALVVVGDKR 96 (123)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEEcCCC
Confidence 99999998753
No 96
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.16 E-value=2.1e-06 Score=76.40 Aligned_cols=89 Identities=10% Similarity=-0.009 Sum_probs=58.3
Q ss_pred ceEEE-ecCCEEEEEEEecCCCC-----ce--eEecCcccc------CCCCCCCCC----c-c-cccccCCCCeEEEEEE
Q 009358 60 PRIVA-REGDRLIIKVVNHVPNN-----IS--IHWHGIRQL------LSGWADGPA----Y-I-TQCPIQTGQSYVYNFT 119 (537)
Q Consensus 60 P~i~v-~~Gd~v~v~v~N~l~~~-----~s--iH~HG~~~~------~~~~~DGv~----~-v-tq~~i~PG~~~~y~f~ 119 (537)
..|.| +.||+|+|+|+|....+ ++ |--+|.... ....++-++ . + ...-|.||++.++.|+
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf~ 137 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLD 137 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEEC
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEEe
Confidence 48999 99999999999997543 33 222221000 000001011 0 1 1124899999999998
Q ss_pred eC-CCccceEEecchhhhhccceeeEEEcC
Q 009358 120 IS-GQRGTLFWHAHISWLRATVYGPLVIFP 148 (537)
Q Consensus 120 ~~-~~~Gt~wYH~h~~~~~~Gl~G~liV~~ 148 (537)
++ -++|+|||+|-..+.+.||.|-|+|.+
T Consensus 138 ~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 138 PAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp GGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred cCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 63 179999999987666669999999963
No 97
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.07 E-value=2.1e-05 Score=67.13 Aligned_cols=88 Identities=15% Similarity=0.073 Sum_probs=57.2
Q ss_pred ceEEE-ecCCEEEEEEEecCCCC-----ce--eEecCccc-------cCCCCCCCCC----c-c-cccccCCCCeEEEEE
Q 009358 60 PRIVA-REGDRLIIKVVNHVPNN-----IS--IHWHGIRQ-------LLSGWADGPA----Y-I-TQCPIQTGQSYVYNF 118 (537)
Q Consensus 60 P~i~v-~~Gd~v~v~v~N~l~~~-----~s--iH~HG~~~-------~~~~~~DGv~----~-v-tq~~i~PG~~~~y~f 118 (537)
..|.| ++||+|+|+|+|....+ ++ |--+|... .....+|=++ . + ...-|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999 99999999999997543 33 22222110 0000011011 0 1 112479999999999
Q ss_pred EeCC--Cccc-eEEecchhhhhccceeeEEEcC
Q 009358 119 TISG--QRGT-LFWHAHISWLRATVYGPLVIFP 148 (537)
Q Consensus 119 ~~~~--~~Gt-~wYH~h~~~~~~Gl~G~liV~~ 148 (537)
++ . .+|+ |||.|...+.+.||.|.|+|.+
T Consensus 98 ~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 98 DV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred ec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 97 4 5655 9999987666669999999963
No 98
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.02 E-value=2.7e-05 Score=66.36 Aligned_cols=87 Identities=11% Similarity=0.125 Sum_probs=57.9
Q ss_pred ceEEE-ecCCEEEEEEEecCCCC-----ceeEec--C---------ccc----cCCCCCCCCCcc-cccccCCCCeEEEE
Q 009358 60 PRIVA-REGDRLIIKVVNHVPNN-----ISIHWH--G---------IRQ----LLSGWADGPAYI-TQCPIQTGQSYVYN 117 (537)
Q Consensus 60 P~i~v-~~Gd~v~v~v~N~l~~~-----~siH~H--G---------~~~----~~~~~~DGv~~v-tq~~i~PG~~~~y~ 117 (537)
..|.| +.||+|+|+++|....+ +++-+- + +.. ...+..|. ..+ ....|.||+++++.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~-~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDE-RVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCT-TEEEECCCBCTTCEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccc-hhhccceeeCCCCEEEEE
Confidence 58999 99999999999997543 443321 1 110 00000111 001 11247999999999
Q ss_pred EEeCC--Cccc-eEEecchhhhhccceeeEEEcC
Q 009358 118 FTISG--QRGT-LFWHAHISWLRATVYGPLVIFP 148 (537)
Q Consensus 118 f~~~~--~~Gt-~wYH~h~~~~~~Gl~G~liV~~ 148 (537)
|.+ . .+|+ |+|.|...+.+.||.|.|+|.+
T Consensus 96 f~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 96 FDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred Eec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 996 4 6885 9999987776669999999963
No 99
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.01 E-value=2.6e-05 Score=81.52 Aligned_cols=87 Identities=13% Similarity=0.193 Sum_probs=62.5
Q ss_pred EEEEEcCcCCCceEEEecCCEEEEEEEecC---CCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCcc
Q 009358 49 SIITVNGQFPGPRIVAREGDRLIIKVVNHV---PNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRG 125 (537)
Q Consensus 49 ~~~~~NG~~PgP~i~v~~Gd~v~v~v~N~l---~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~G 125 (537)
.+...+-.+--+.|+|++||+|++.++|.. +..+++...++ |+ ..-+.||++.++.|.+ +++|
T Consensus 547 ~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GI----K~DaiPGrtnsvtFta-dkPG 612 (638)
T 3sbq_A 547 YMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GV----SMEISPQQTSSITFVA-DKPG 612 (638)
T ss_dssp EEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE----EEEECTTCEEEEEEEC-CSCE
T ss_pred EEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cc----eeeeCCCCeEEEEEEc-CCCE
Confidence 334455556557999999999999999974 23333322221 11 1247899999999996 8999
Q ss_pred ceEEecch-hhhh-ccceeeEEEcCC
Q 009358 126 TLFWHAHI-SWLR-ATVYGPLVIFPK 149 (537)
Q Consensus 126 t~wYH~h~-~~~~-~Gl~G~liV~~~ 149 (537)
+|||+|.. .+.. .+|.|.|+|+++
T Consensus 613 vY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 613 LHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEECCCcCCCCcccceEEEEEecC
Confidence 99999985 2333 689999999874
No 100
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.00 E-value=3e-05 Score=66.06 Aligned_cols=87 Identities=9% Similarity=0.021 Sum_probs=57.0
Q ss_pred ceEEE-ecCCEEEEEEEecCCCC-----ceeEe--cCccc-------cCCCCCCCCC-----ccc-ccccCCCCeEEEEE
Q 009358 60 PRIVA-REGDRLIIKVVNHVPNN-----ISIHW--HGIRQ-------LLSGWADGPA-----YIT-QCPIQTGQSYVYNF 118 (537)
Q Consensus 60 P~i~v-~~Gd~v~v~v~N~l~~~-----~siH~--HG~~~-------~~~~~~DGv~-----~vt-q~~i~PG~~~~y~f 118 (537)
..|.| +.||+|+|+|+|....+ +++-+ .|... .....++=++ .+. ...|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 58999 99999999999987543 43332 22110 0000011111 010 12489999999999
Q ss_pred EeCC--Cccc-eEEecchhhhhccceeeEEEc
Q 009358 119 TISG--QRGT-LFWHAHISWLRATVYGPLVIF 147 (537)
Q Consensus 119 ~~~~--~~Gt-~wYH~h~~~~~~Gl~G~liV~ 147 (537)
.+ . .+|+ |||.|...+.+.||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 98 DV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 97 4 5776 999998766666999999984
No 101
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.98 E-value=1.5e-05 Score=67.48 Aligned_cols=74 Identities=11% Similarity=0.096 Sum_probs=50.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecchhhhhcc
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHISWLRAT 139 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~~~~~~G 139 (537)
+.|+|++||+|++ +|... .++++... ..+-+|.. ...+.||++++|.| +.+|+|+|+|..+..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 6999999998655 56543 44444432 11112321 12357899999988 468999999987553
Q ss_pred ceeeEEEcCCC
Q 009358 140 VYGPLVIFPKR 150 (537)
Q Consensus 140 l~G~liV~~~~ 150 (537)
|.|.|+|.+..
T Consensus 84 M~G~I~V~~~p 94 (122)
T 2ux6_A 84 MVGVVQVGDAP 94 (122)
T ss_dssp EEEEEEESSSC
T ss_pred CEEEEEEeCCC
Confidence 99999998743
No 102
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.72 E-value=5.4e-05 Score=65.68 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=52.3
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEE---ec-------CCCc----CceEecEEEECCcceEEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVD---VD-------AIYI----KSFQTDILLITPGQTTNILLKA 277 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via---~D-------G~~v----~P~~~d~v~l~pGeR~dv~v~~ 277 (537)
...+++++|++++|+|.|.+....+.|++++....+.+ .| ..++ .....++..|.|||++++.+++
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~ 113 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA 113 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC
T ss_pred CCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC
Confidence 56899999999999999998642223444332110000 00 0122 1234567789999999999999
Q ss_pred CCCCCCceEEEEEee
Q 009358 278 KPSYPNATFLMSARP 292 (537)
Q Consensus 278 ~~~~~~g~y~i~~~~ 292 (537)
+++ |.|+++|+.
T Consensus 114 ~~p---G~y~f~C~~ 125 (139)
T 2aan_A 114 PAA---GTYLYICTV 125 (139)
T ss_dssp CSS---EEEEEECCS
T ss_pred CCC---eEEEEEcCC
Confidence 876 999999985
No 103
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.39 E-value=0.00058 Score=56.65 Aligned_cols=62 Identities=23% Similarity=0.182 Sum_probs=48.6
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
.+.+++++|++++|++.|.... .+.|.+.+. | -+..+.||+++++.+.++++ |.|+++|+
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~--------~~~~i~pG~~~~~~f~~~~~---G~y~~~C~ 96 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------G--------VQEVIKAGETKTISFTADKA---GAFTIWCQ 96 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------T--------EEEEECTTCEEEEEEECCSC---EEEEEBCS
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------C--------ceeEeCCCCEEEEEEECCCC---EEEEEECC
Confidence 4589999999999999999854 233444432 1 15679999999999999877 99999998
Q ss_pred ec
Q 009358 292 PY 293 (537)
Q Consensus 292 ~~ 293 (537)
..
T Consensus 97 ~~ 98 (112)
T 1iby_A 97 LH 98 (112)
T ss_dssp SS
T ss_pred CC
Confidence 63
No 104
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=97.26 E-value=0.00011 Score=60.17 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=49.4
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
.+.+++++|++++| +|.+.. .+.+++++..+.. .+|..-.....++..|.||+++++.+.++..+ |.||++|+
T Consensus 18 p~~i~v~~Gd~V~~--~N~~~~-~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~--G~y~y~C~ 90 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNNKLP-PHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPA--GTYTYYCA 90 (105)
T ss_dssp SSEEEECTTEEEEE--EECSSC-CEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCS--EEEEEECT
T ss_pred CCEEEEcCCCEEEE--EECCCC-CCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCC--eeEEEEeC
Confidence 46899999998865 688644 4558888765421 01100001124678999999999988774333 99999999
No 105
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.15 E-value=0.0028 Score=53.08 Aligned_cols=85 Identities=11% Similarity=0.114 Sum_probs=53.0
Q ss_pred ceEEEec-CCEEEEEEEecCCCC-----ce--eEe---------cCcccc-CCCCC-CCCCc-c-cccccCCCCeEEEEE
Q 009358 60 PRIVARE-GDRLIIKVVNHVPNN-----IS--IHW---------HGIRQL-LSGWA-DGPAY-I-TQCPIQTGQSYVYNF 118 (537)
Q Consensus 60 P~i~v~~-Gd~v~v~v~N~l~~~-----~s--iH~---------HG~~~~-~~~~~-DGv~~-v-tq~~i~PG~~~~y~f 118 (537)
..|.|+. |++|+|+|+|....+ ++ |-- -|+..- ...++ .+-+. + ...-|.||++.+..|
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf 97 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTF 97 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEE
Confidence 6999986 999999999997442 22 221 122110 01111 01111 1 112379999999999
Q ss_pred EeC--CCccceEEecchhhhhccceeeEEEc
Q 009358 119 TIS--GQRGTLFWHAHISWLRATVYGPLVIF 147 (537)
Q Consensus 119 ~~~--~~~Gt~wYH~h~~~~~~Gl~G~liV~ 147 (537)
+.+ ..+|+|.|.|. +.+ ||.|.|+|.
T Consensus 98 ~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 98 DVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred eCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 974 27999999999 334 999999984
No 106
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=96.81 E-value=0.0036 Score=50.57 Aligned_cols=61 Identities=20% Similarity=0.295 Sum_probs=47.8
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++|++.|.+... +.|.+++... ...+.||+..++.++++++ |.|.+.|.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~~-H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~~---G~Y~y~C~ 86 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKSE-HTFTIKKLGI----------------DVVVESGKEKNITVKPKSA---GTYELICR 86 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSSC-EEEEEGGGTE----------------EEEECTTCEEEEEECCCSC---EEEEEECT
T ss_pred CCEEEECCCCEEEEEEEcCCCce-EEEEEecCCc----------------ceeecCCcceeEEEecccC---ceEEEECc
Confidence 45799999999999999988543 3355543322 3457899999999999888 99999997
Q ss_pred e
Q 009358 292 P 292 (537)
Q Consensus 292 ~ 292 (537)
.
T Consensus 87 ~ 87 (100)
T 4hci_A 87 Y 87 (100)
T ss_dssp T
T ss_pred c
Confidence 4
No 107
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=96.72 E-value=0.0075 Score=51.97 Aligned_cols=81 Identities=12% Similarity=0.196 Sum_probs=52.5
Q ss_pred cceEEEeCCcEEEEEEEe--cCCCCceeeEEcCC--eEEEE-------EecCCCc-----CceEecEEEECCcceEEEEE
Q 009358 212 TFKLKVKPGKTYLLRLIN--AALNDELFFSIANH--SVTVV-------DVDAIYI-----KSFQTDILLITPGQTTNILL 275 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN--~~~~~~~~~~i~gh--~~~vi-------a~DG~~v-----~P~~~d~v~l~pGeR~dv~v 275 (537)
...+++++|++++|++.| .+. ..+.|++.+. .+.-. ..|..++ .....++..|.||++.++.+
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~ 110 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLG-VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTF 110 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSC-CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCC-CceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEE
Confidence 457999999999999999 443 2333454421 00000 0011122 12345678899999999999
Q ss_pred EeCCCCCCceEEEEEeeccCC
Q 009358 276 KAKPSYPNATFLMSARPYATG 296 (537)
Q Consensus 276 ~~~~~~~~g~y~i~~~~~~~~ 296 (537)
+++++ |.|++.|.....|
T Consensus 111 ~~~~~---G~y~f~C~~~~H~ 128 (140)
T 1qhq_A 111 RTPAP---GTYLYICTFPGHY 128 (140)
T ss_dssp ECCSS---EEEEEECCSTTTT
T ss_pred EeCCC---eeEEEEeCCcCHh
Confidence 99877 9999999854443
No 108
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.60 E-value=0.011 Score=52.40 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=54.9
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecch-hhhh-
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWLR- 137 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~-~~~~- 137 (537)
..|.+..|++|++.++|. +.. |+...... |+ +.-+.||+.-++.|.+ +++|+|++.|.. .+..
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DVi-----Hsf~IP~l----gi----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSC-----EEEEETTS----SC----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-Cce-----EEEEECCC----Ce----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999997 333 33332211 11 1235689999999996 899999999984 4444
Q ss_pred ccceeeEEEcC
Q 009358 138 ATVYGPLVIFP 148 (537)
Q Consensus 138 ~Gl~G~liV~~ 148 (537)
.+|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 79999999874
No 109
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=96.57 E-value=0.014 Score=51.21 Aligned_cols=84 Identities=15% Similarity=0.129 Sum_probs=50.6
Q ss_pred cEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCCCceeeEEcCC--eEEEEEecCCCcCceEecEEEECCcc--
Q 009358 194 AYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANH--SVTVVDVDAIYIKSFQTDILLITPGQ-- 269 (537)
Q Consensus 194 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh--~~~via~DG~~v~P~~~d~v~l~pGe-- 269 (537)
.+.++|.. .+.|+|++|++++|++.|.+....+.|.+... .+.....+ ..+.+.......|.|||
T Consensus 52 ~~~~~g~~----------~p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 52 SFEVHDKK----------NPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEETTEE----------SCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBEE
T ss_pred cccccCCC----------CCEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCce
Confidence 57777764 35899999999999999975322333444321 11000000 00000000112679999
Q ss_pred eEEEEEEeCCCCCCceEEEEEee
Q 009358 270 TTNILLKAKPSYPNATFLMSARP 292 (537)
Q Consensus 270 R~dv~v~~~~~~~~g~y~i~~~~ 292 (537)
+.++.+++ ++ |.||++|+.
T Consensus 121 t~t~tft~-~p---GtY~y~C~~ 139 (154)
T 2cal_A 121 YTDFTWHP-TA---GTYYYVCQI 139 (154)
T ss_dssp EEEEEECC-CS---EEEEEECCS
T ss_pred EEEEEEEE-CC---ceEEEECCC
Confidence 88888888 66 999999984
No 110
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.54 E-value=0.01 Score=50.77 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=53.2
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecch-hhhh-
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWLR- 137 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~-~~~~- 137 (537)
..|.+..|++|++.++|.. .. |+..... .|. +.-+.||+.-++.|+. +++|+|.|+|.. .+..
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~----~~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEG----TNI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETT----SSC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecC----CCc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 32 4443321 121 1246789999999986 899999999953 2222
Q ss_pred ccceeeEEEcC
Q 009358 138 ATVYGPLVIFP 148 (537)
Q Consensus 138 ~Gl~G~liV~~ 148 (537)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 68999998863
No 111
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.35 E-value=0.029 Score=59.76 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=62.0
Q ss_pred cEEEcCccCCCcccCCCCcceEEEeCCcEEEEEEEecCCC--CceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceE
Q 009358 194 AYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALN--DELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTT 271 (537)
Q Consensus 194 ~~liNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~--~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~ 271 (537)
.+..|++. ..+.++++.|++++|++.|.... ..+.|++.++.+. ..+.||+..
T Consensus 503 m~~~n~~f---------~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~ 557 (595)
T 1fwx_A 503 MSSVAPSF---------SIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTS 557 (595)
T ss_dssp EEEETTEE---------SCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEE
T ss_pred EEEecCcc---------cCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeE
Confidence 45566653 35689999999999999997532 2455666665421 578999999
Q ss_pred EEEEEeCCCCCCceEEEEEeeccCCCCCCCCcceEEEEEEe
Q 009358 272 NILLKAKPSYPNATFLMSARPYATGQGTFDNSTVAGILEYE 312 (537)
Q Consensus 272 dv~v~~~~~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~ 312 (537)
++.++++++ |.||++|+.++.. ......+.|...
T Consensus 558 t~~Fta~~p---GtY~yhC~e~Cg~----~H~gM~G~IiV~ 591 (595)
T 1fwx_A 558 SVTFVAANP---GVYWYYCQWFCHA----LHMEMRGRMLVE 591 (595)
T ss_dssp EEEEECCSC---EEEEEECCSCCST----TCTTCEEEEEEE
T ss_pred EEEEECCCC---EEEEEECCCCCCC----CccCCEEEEEEE
Confidence 999999887 9999999953322 112556666554
No 112
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=96.24 E-value=0.00083 Score=54.97 Aligned_cols=73 Identities=23% Similarity=0.273 Sum_probs=44.8
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++|+ |.+... +.|++++..+.. .+|........+++.+.||+++++.+.++..+ |.|+++|+
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~~-H~~~~~~~~~~~--~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~--G~y~y~C~ 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVPP-HNVVFDAALNPA--KSADLAKSLSHKQLLMSPGQSTSTTFPADAPA--GEYTFYCE 91 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSSC-CCBEECSSSSTT--CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCS--EEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCCC-ceEEEeCCCCcc--cccccchhccccceeeCCCCEEEEEEecCCCC--ceEEEEeC
Confidence 457999999998775 876432 335555432200 01110000113567799999999977663333 99999998
No 113
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=95.93 E-value=0.014 Score=46.70 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=44.0
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++| .|.+.. .+.+++++..+ -+|........+++.+.||+++++. ++++ |.|+++|+
T Consensus 17 P~~i~v~~G~~V~~--~n~~~~-~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~t--f~~~---G~y~y~C~ 84 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAGF-PHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVK--LTAA---GEYGYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEE--CCSC---EEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----CCccccccccccceecCCCCEEEEE--eCCC---eEEEEEcC
Confidence 45799999998877 687743 34466654321 0111100012457889999999885 4555 99999998
No 114
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=95.66 E-value=0.032 Score=43.78 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=42.1
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++|+ |.+.. .+.+++++. .+...+...+.||+++++.+ +++ |.|+++|+
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~~-~H~v~~~~~------------~~~~~~~~~~~~g~~~~~~f--~~~---G~y~~~C~ 77 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKLA-PHNVVVEGQ------------PELSHKDLAFSPGETFEATF--SEP---GTYTYYCE 77 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEETTC------------GGGCEEEEECSTTCEEEEEC--CSC---EEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeCC------------CccCcccceeCCCCEEEEEe--CCC---EEEEEEeC
Confidence 457899999998875 66532 334555541 12224677899999888754 655 99999998
No 115
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.65 E-value=0.011 Score=52.28 Aligned_cols=78 Identities=19% Similarity=0.247 Sum_probs=49.4
Q ss_pred cceEEE-eCCcEEEEEEEecCCCC----ceeeEEcCCe-EEEEEe------cCCCcC---c-eEecEEEECCcceEEEEE
Q 009358 212 TFKLKV-KPGKTYLLRLINAALND----ELFFSIANHS-VTVVDV------DAIYIK---S-FQTDILLITPGQTTNILL 275 (537)
Q Consensus 212 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~via~------DG~~v~---P-~~~d~v~l~pGeR~dv~v 275 (537)
...|+| ++|++++|.|.|.+... .+.|.|.... +.-++. +-.++. + ....+-.|.|||+++|.+
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf 136 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTL 136 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEE
Confidence 457999 99999999999998653 2333332211 000000 112221 1 122345689999999999
Q ss_pred EeC--CCCCCceEEEEEee
Q 009358 276 KAK--PSYPNATFLMSARP 292 (537)
Q Consensus 276 ~~~--~~~~~g~y~i~~~~ 292 (537)
+++ ++ |.|++.|..
T Consensus 137 ~~~~lkp---G~Y~f~Ct~ 152 (167)
T 3ay2_A 137 DPAKLAD---GDYKFACTF 152 (167)
T ss_dssp CGGGGTT---SCEEEECCS
T ss_pred ecCCCCC---cEEEEEcCC
Confidence 987 55 999999974
No 116
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.56 E-value=0.026 Score=47.76 Aligned_cols=78 Identities=15% Similarity=0.201 Sum_probs=48.8
Q ss_pred cceEEE-eCCcEEEEEEEecCCCC----ceeeEEcCCe-EEEEE-------ecCCCcC---c-eEecEEEECCcceEEEE
Q 009358 212 TFKLKV-KPGKTYLLRLINAALND----ELFFSIANHS-VTVVD-------VDAIYIK---S-FQTDILLITPGQTTNIL 274 (537)
Q Consensus 212 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~via-------~DG~~v~---P-~~~d~v~l~pGeR~dv~ 274 (537)
+..|+| ++|++++|.+.|.+... .+.|.|.... +.-++ .|-.++. + ....+-.|.|||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 457999 99999999999999653 2334433210 00000 0112221 1 12234468999999999
Q ss_pred EEeC--CCCCCc-eEEEEEee
Q 009358 275 LKAK--PSYPNA-TFLMSARP 292 (537)
Q Consensus 275 v~~~--~~~~~g-~y~i~~~~ 292 (537)
++++ ++ | +|.+.|..
T Consensus 96 f~~~~l~~---G~~Y~f~C~~ 113 (128)
T 2iaa_C 96 FDVSKLKE---GEDYAFFCSF 113 (128)
T ss_dssp EESSCCCT---TCCEEEECCS
T ss_pred EeccccCC---CceEEEEECC
Confidence 9987 55 6 69999973
No 117
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.51 E-value=0.012 Score=49.90 Aligned_cols=79 Identities=11% Similarity=0.153 Sum_probs=49.2
Q ss_pred cceEEE-eCCcEEEEEEEecCCCC----ceeeEEcCCe-EEEEE-------ecCCCcC---ce-EecEEEECCcceEEEE
Q 009358 212 TFKLKV-KPGKTYLLRLINAALND----ELFFSIANHS-VTVVD-------VDAIYIK---SF-QTDILLITPGQTTNIL 274 (537)
Q Consensus 212 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~via-------~DG~~v~---P~-~~d~v~l~pGeR~dv~ 274 (537)
...|+| ++|++++|.+.|.+... .+.|.|.... +.-++ .+-.++. +. ...+-.|.|||+.++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 458999 99999999999999653 2334443221 00000 0112221 11 1234468999999999
Q ss_pred EEeC--CCCCCceEEEEEee
Q 009358 275 LKAK--PSYPNATFLMSARP 292 (537)
Q Consensus 275 v~~~--~~~~~g~y~i~~~~ 292 (537)
++++ ++. ++|++.|..
T Consensus 97 f~~~~l~~G--~~Y~f~C~~ 114 (129)
T 2ccw_A 97 FDVSKIAAG--ENYAYFCSF 114 (129)
T ss_dssp EEGGGSCTT--CCEEEECCS
T ss_pred EeccccCCC--ceEEEEeCC
Confidence 9997 552 669999973
No 118
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=95.50 E-value=0.011 Score=47.34 Aligned_cols=67 Identities=15% Similarity=0.156 Sum_probs=42.8
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++|+ |.+.. .+.+++++...- |..-.....+++.+.||+++++.+ +++ |.|+++|+
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~-~H~~~~~~~~~p-----g~~~~~~~~~~~~~~pG~~~~~tf--~~~---G~y~~~C~ 84 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKLS-PHNIVFDADGVP-----ADTAAKLSHKGLLFAAGESFTSTF--TEP---GTYTYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEECCSSSC-----HHHHHHHCEEEEECSTTCEEEEEC--CSC---EEEEEECG
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeCCCCC-----ccccccccccccccCCCCEEEEEc--CCC---eEEEEEcC
Confidence 457999999998876 76532 334555442110 000001124578899999998854 655 99999998
No 119
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.47 E-value=0.0091 Score=50.67 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=49.1
Q ss_pred cceEEEeCC-cEEEEEEEecCCCC----ceeeEEcCCe-EEEEEecC-------CCcC---ce-EecEEEECCcceEEEE
Q 009358 212 TFKLKVKPG-KTYLLRLINAALND----ELFFSIANHS-VTVVDVDA-------IYIK---SF-QTDILLITPGQTTNIL 274 (537)
Q Consensus 212 ~~~~~v~~G-~~~rlRliN~~~~~----~~~~~i~gh~-~~via~DG-------~~v~---P~-~~d~v~l~pGeR~dv~ 274 (537)
...|+|++| ++++|.+.|.+... .+.|.|.... +.-++.|+ .++. +. ...+-.|.|||+.++.
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 458999999 99999999998643 2333333211 00000000 1211 11 1234468999999999
Q ss_pred EEeC---CCCCCceEEEEEee
Q 009358 275 LKAK---PSYPNATFLMSARP 292 (537)
Q Consensus 275 v~~~---~~~~~g~y~i~~~~ 292 (537)
++++ ++ |.|++.|..
T Consensus 97 f~~~~~~~~---G~Y~f~C~~ 114 (129)
T 1cuo_A 97 FKVSALSKD---EAYTYFCSY 114 (129)
T ss_dssp EEGGGCCTT---SCEEEECCS
T ss_pred EeccccCCC---ceEEEEeCC
Confidence 9987 55 999999973
No 120
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.37 E-value=0.014 Score=49.45 Aligned_cols=79 Identities=14% Similarity=0.233 Sum_probs=49.2
Q ss_pred cceEEE-eCCcEEEEEEEecCCCC----ceeeEEcCCe-EEEEEecC-------CCcCc----eEecEEEECCcceEEEE
Q 009358 212 TFKLKV-KPGKTYLLRLINAALND----ELFFSIANHS-VTVVDVDA-------IYIKS----FQTDILLITPGQTTNIL 274 (537)
Q Consensus 212 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~via~DG-------~~v~P----~~~d~v~l~pGeR~dv~ 274 (537)
+..|+| ++|++++|.+.|.+... .+.|.|.... +.-++.|| .++.+ ....+-.|.|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 457999 99999999999999653 2334443211 00000111 22221 11233369999999999
Q ss_pred EEeC--CCCCCceEEEEEee
Q 009358 275 LKAK--PSYPNATFLMSARP 292 (537)
Q Consensus 275 v~~~--~~~~~g~y~i~~~~ 292 (537)
++++ ++ |++|++.|..
T Consensus 97 f~~~~l~~--G~~Y~f~C~~ 114 (128)
T 1nwp_A 97 FDVSKLAA--GEKYGFFCSF 114 (128)
T ss_dssp EEGGGSCT--TSCEEEECCS
T ss_pred EeccccCC--CceEEEEECC
Confidence 9987 55 2569999973
No 121
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=95.06 E-value=0.015 Score=46.86 Aligned_cols=65 Identities=9% Similarity=0.065 Sum_probs=41.5
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCC-------cCc-eEecEEEECCcceEEEEEEeCCCCCC
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIY-------IKS-FQTDILLITPGQTTNILLKAKPSYPN 283 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~-------v~P-~~~d~v~l~pGeR~dv~v~~~~~~~~ 283 (537)
+..+++++|++++|+ |.+... |.+.+..-++.. ..| ...+.+.+.||+++++.+ +++
T Consensus 16 P~~i~v~~G~tV~~~--n~~~~~--------H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~--- 80 (102)
T 1kdj_A 16 PDSITVSAGEAVEFT--LVGETG--------HNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--STP--- 80 (102)
T ss_dssp SSEEEECTTCCEEEE--ECSSSC--------BCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CSC---
T ss_pred CCEEEECCCCEEEEE--ECCCCC--------eEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe--CCC---
Confidence 457999999998875 776432 333332223321 001 112567789999988855 555
Q ss_pred ceEEEEEe
Q 009358 284 ATFLMSAR 291 (537)
Q Consensus 284 g~y~i~~~ 291 (537)
|.|++.|.
T Consensus 81 G~y~y~C~ 88 (102)
T 1kdj_A 81 GTYTFYCT 88 (102)
T ss_dssp EEEEEECS
T ss_pred eEEEEEeC
Confidence 99999998
No 122
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.90 E-value=0.0085 Score=50.16 Aligned_cols=77 Identities=14% Similarity=0.211 Sum_probs=49.9
Q ss_pred cceEEEeC-CcEEEEEEEecCCCC----ceeeEEcCC-eEEEEEe-------cCCCcCc----eEecEEEECCcceEEEE
Q 009358 212 TFKLKVKP-GKTYLLRLINAALND----ELFFSIANH-SVTVVDV-------DAIYIKS----FQTDILLITPGQTTNIL 274 (537)
Q Consensus 212 ~~~~~v~~-G~~~rlRliN~~~~~----~~~~~i~gh-~~~via~-------DG~~v~P----~~~d~v~l~pGeR~dv~ 274 (537)
...|+|+. |+++||.|.|.|... .+.|-|... .+.-++. |-.++++ ....+..|+|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 45899976 999999999999753 233333210 0000011 2234432 23355679999999999
Q ss_pred EEeC---CCCCCceEEEEEe
Q 009358 275 LKAK---PSYPNATFLMSAR 291 (537)
Q Consensus 275 v~~~---~~~~~g~y~i~~~ 291 (537)
++++ ++ |+|.+.|.
T Consensus 97 f~~~~l~~~---G~y~f~C~ 113 (125)
T 3fsa_A 97 FDVSKLKEG---EQYMFFCA 113 (125)
T ss_dssp EEGGGC------CCEEEECS
T ss_pred EeCcCcCCC---ccEEEEcC
Confidence 9998 44 99999998
No 123
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=94.86 E-value=0.028 Score=44.81 Aligned_cols=64 Identities=19% Similarity=0.222 Sum_probs=41.3
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC--ceEecEEEECCcceEEEEEEeCCCCCCceEEEE
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK--SFQTDILLITPGQTTNILLKAKPSYPNATFLMS 289 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~ 289 (537)
+..+++++|++++|+ |.+.. .|.+.+...+ .+.. ....+++.+.||+++++.+ +++ |.|++.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--------~H~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~tf--~~~---G~y~y~ 81 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVG--------PHNVIFDKVP-AGESAPALSNTKLAIAPGSFYSVTL--GTP---GTYSFY 81 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--------CCCBEEEECC-TTSCHHHHCBCCCCCSCSCCEEEEC--CSC---SEEEEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCCC-CccccccccccceecCCCCEEEEEe--CCC---eEEEEE
Confidence 457999999998775 76532 2444433221 1110 1113567899999998855 555 999999
Q ss_pred Ee
Q 009358 290 AR 291 (537)
Q Consensus 290 ~~ 291 (537)
|.
T Consensus 82 C~ 83 (97)
T 1b3i_A 82 CT 83 (97)
T ss_dssp CS
T ss_pred cc
Confidence 98
No 124
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=94.66 E-value=0.066 Score=43.40 Aligned_cols=63 Identities=17% Similarity=0.133 Sum_probs=41.6
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++| .|.... .+.+++++.. ||. .+. ++-.|.||+++++.+ +++ |.|+++|.
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~~-~H~v~~~~~~------~g~--~~~--~~~~~~pG~~~~~tf--~~~---G~y~y~C~ 93 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREAM-PHNVHFVAGV------LGE--AAL--KGPMMKKEQAYSLTF--TEA---GTYDYHCT 93 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSS-CBCCEECTTT------SSS--SCE--ECCCBCTTEEEEEEE--CSC---EEEEEECS
T ss_pred CCEEEECCCCEEEE--EECCCC-CEEEEEcCCC------CCc--ccc--cccccCCCCEEEEEe--CCC---EEEEEEeC
Confidence 46899999999877 488753 3345554321 343 112 222478999988765 555 99999997
Q ss_pred e
Q 009358 292 P 292 (537)
Q Consensus 292 ~ 292 (537)
.
T Consensus 94 ~ 94 (105)
T 2ov0_A 94 P 94 (105)
T ss_dssp S
T ss_pred C
Confidence 4
No 125
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=94.41 E-value=0.045 Score=43.72 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=43.0
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC--ceEecEEEECCcceEEEEEEeCCCCCCceEEEE
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK--SFQTDILLITPGQTTNILLKAKPSYPNATFLMS 289 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~ 289 (537)
+..+++++|++++| .|.+.. .+.+++++..+ .+|.... ....+.+.+.||+++++.+ +++ |.|++.
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~-~H~~~~~~~~~----p~g~~~~~~~~~~~~~~~~~G~~~~~~f--~~~---G~y~~~ 83 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAGF-PHNDLFDKKEV----PAGVDVTKISMPEEDLLNAPGEEYSVTL--TEK---GTYKFY 83 (99)
T ss_dssp SSEEEECTTEEEEE--EECSSC-CBCCEECTTSS----CTTCCHHHHSCCTTCCBCSTTCEEEEEE--CSC---EEEEEE
T ss_pred CCEEEECCCCEEEE--EECCCC-cceEEEeCCCC----ccccccccccccccceeeCCCCEEEEEe--CCC---cEEEEE
Confidence 45799999998877 687743 23355554322 1222110 0113457789999998855 555 999999
Q ss_pred Ee
Q 009358 290 AR 291 (537)
Q Consensus 290 ~~ 291 (537)
|.
T Consensus 84 C~ 85 (99)
T 1byp_A 84 CA 85 (99)
T ss_dssp CG
T ss_pred cC
Confidence 98
No 126
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=93.83 E-value=0.073 Score=42.48 Aligned_cols=68 Identities=16% Similarity=0.224 Sum_probs=42.5
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC--ceEecEEEECCcceEEEEEEeCCCCCCceEEEE
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK--SFQTDILLITPGQTTNILLKAKPSYPNATFLMS 289 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~ 289 (537)
+..+++++|++++| .|.+.. .+.+.+++..+ -+|.... ....+.+.+.||+++++.+ +++ |.|++.
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~-~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~~---G~y~~~ 83 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGF-PHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVAL--SNK---GEYSFY 83 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--CSC---EEEEEE
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----cccccccccccccCccccCCCCEEEEEE--CCC---ceEEEE
Confidence 45799999998877 687743 33455554321 0221100 0112346789999988855 555 999999
Q ss_pred Ee
Q 009358 290 AR 291 (537)
Q Consensus 290 ~~ 291 (537)
|.
T Consensus 84 C~ 85 (99)
T 1plc_A 84 CS 85 (99)
T ss_dssp CG
T ss_pred cC
Confidence 98
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.42 E-value=0.64 Score=48.88 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=56.1
Q ss_pred cceEEEeCCcEEEEEEEecCC--CCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEE
Q 009358 212 TFKLKVKPGKTYLLRLINAAL--NDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMS 289 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~--~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~ 289 (537)
...++|+.|++++|.+.|... ...+.|.|.++... +.+.||+...+.++++++ |.|++.
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadkP---GvY~y~ 617 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADKP---GLHWYY 617 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCSC---EEEEEE
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCCC---EEEEEE
Confidence 457899999999999999753 34556777665432 368899999999999988 999999
Q ss_pred EeeccCCCCCCCCcceEEEEEE
Q 009358 290 ARPYATGQGTFDNSTVAGILEY 311 (537)
Q Consensus 290 ~~~~~~~~~~~~~~~~~ail~Y 311 (537)
|..++.. ......+.|..
T Consensus 618 CSE~CGa----~Hs~M~G~ViV 635 (638)
T 3sbq_A 618 CSWFCHA----LHMEMVGRMMV 635 (638)
T ss_dssp CCSCCST----TCTTCEEEEEE
T ss_pred CCCcCCC----CcccceEEEEE
Confidence 9854332 12334555544
No 128
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=93.24 E-value=0.16 Score=40.39 Aligned_cols=69 Identities=17% Similarity=0.151 Sum_probs=41.0
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++|+ |.+.. .+.+.+....+ -+|........+...+.||+++++.+ +++ |.|++.|.
T Consensus 17 P~~i~v~~GdtV~~~--n~~~~-~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~---G~y~y~C~ 84 (98)
T 1iuz_A 17 PSKISVAAGEAIEFV--NNAGF-PHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKL--STP---GVYGVYCE 84 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEEC--CSC---EEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CEEEEEeCCCC----ccccccccccccccccCCCCEEEEEc--CCC---EEEEEEch
Confidence 458999999998875 76542 22233322100 01111011113357899999988855 555 99999997
Q ss_pred e
Q 009358 292 P 292 (537)
Q Consensus 292 ~ 292 (537)
.
T Consensus 85 ~ 85 (98)
T 1iuz_A 85 P 85 (98)
T ss_dssp T
T ss_pred h
Confidence 4
No 129
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=92.42 E-value=0.16 Score=42.42 Aligned_cols=74 Identities=9% Similarity=0.178 Sum_probs=46.9
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++|+|.+-|. +|.+... ++ ..|.....+.+.||+.+++-+ +++ |.|++.|.
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~--~~--~~P~g~~~f~~~pg~t~s~TF--~~p---G~y~y~C~ 79 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK-----------SHNVEAI--KE--ILPEGVESFKSKINESYTLTV--TEP---GLYGVKCT 79 (123)
T ss_dssp SSEEEECTTEEEEEEESST-----------TCCCEEC--TT--SSCTTCCCCBCCTTCCEEEEE--CSC---EEEEEECG
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--CC--cCCCCccceecCCCCEEEEEe--CCC---eEEEEEeC
Confidence 4579999999999977763 2444332 11 112212234467999888776 555 99999998
Q ss_pred eccCCCCCCCCcceEEEEEEe
Q 009358 292 PYATGQGTFDNSTVAGILEYE 312 (537)
Q Consensus 292 ~~~~~~~~~~~~~~~ail~Y~ 312 (537)
. .+ .....+.|...
T Consensus 80 ~--H~-----~~GM~G~I~V~ 93 (123)
T 3erx_A 80 P--HF-----GMGMVGLVQVG 93 (123)
T ss_dssp G--GT-----TTTCEEEEEES
T ss_pred C--CC-----cCCcEEEEEEC
Confidence 4 22 13467777764
No 130
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=91.55 E-value=1.7 Score=36.77 Aligned_cols=60 Identities=12% Similarity=0.293 Sum_probs=45.4
Q ss_pred eEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeec
Q 009358 214 KLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (537)
Q Consensus 214 ~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 293 (537)
.+.++.|+++||++.|.. ..+.|.+.+..+ .+.+.||+.-.+.++++++ |.|.+.|..+
T Consensus 61 ~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~~---G~y~~~C~e~ 119 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKRP---GEYRIICNQY 119 (135)
T ss_dssp SEEEETTSEEEEEEEBSS--SCEEEEETTSSC----------------EEEECBTBCEEEEEECCSC---EEEEEECCSC
T ss_pred EEEEcCCCEEEEEEEeCC--ccceEEecCCCc----------------eeEeCCCCcEEEEEEcCCC---EEEEEECccc
Confidence 689999999999988764 344455443322 2457899989999999988 9999999754
Q ss_pred c
Q 009358 294 A 294 (537)
Q Consensus 294 ~ 294 (537)
.
T Consensus 120 C 120 (135)
T 2cua_A 120 C 120 (135)
T ss_dssp C
T ss_pred C
Confidence 3
No 131
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=91.04 E-value=0.46 Score=38.39 Aligned_cols=63 Identities=16% Similarity=0.150 Sum_probs=40.0
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++|+ |.+... +.+.+..... |. .. .++-.|.+|+++++.+ +++ |.|.+.|.
T Consensus 33 P~~i~V~~G~tV~~~--N~d~~~-H~v~~~~~~~------~~--~~--~~s~~l~~g~~~~~tf--~~~---G~y~~~C~ 94 (106)
T 1id2_A 33 TPEVTIKAGETVYWV--NGEVMP-HNVAFKKGIV------GE--DA--FRGEMMTKDQAYAITF--NEA---GSYDYFCT 94 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSSC-BCCEECTTTS------SS--SC--EECCCBCTTEEEEEEE--CSC---EEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCCCc-EEEEEeCCCC------Cc--cc--ccccccCCCCEEEEEe--CCC---EEEEEEeC
Confidence 458999999998776 777532 2233332110 10 11 2333578999988765 555 99999997
Q ss_pred e
Q 009358 292 P 292 (537)
Q Consensus 292 ~ 292 (537)
.
T Consensus 95 ~ 95 (106)
T 1id2_A 95 P 95 (106)
T ss_dssp S
T ss_pred C
Confidence 4
No 132
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=90.49 E-value=0.45 Score=40.22 Aligned_cols=63 Identities=14% Similarity=0.110 Sum_probs=40.4
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++++|+ |..... +.+.+.... +|. . ..++-.+.||+++++.+ +++ |.|++.|.
T Consensus 59 P~~i~V~~GdtV~~~--N~d~~~-H~v~~~~~~------~g~--~--~~~s~~l~pG~t~~~tF--~~~---G~y~y~C~ 120 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEVMP-HNVAFKKGI------VGE--D--AFRGEMMTKDQAYAITF--NEA---GSYDYFCT 120 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSSSC-BCCEECTTT------SSS--S--CEECCCBCTTEEEEEEE--CSC---EEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCCCc-eEEEEeCCC------CCc--c--cccccccCCCCEEEEEc--CCC---EEEEEEeC
Confidence 468999999999875 776432 234443211 111 1 12334578999998766 555 99999997
Q ss_pred e
Q 009358 292 P 292 (537)
Q Consensus 292 ~ 292 (537)
.
T Consensus 121 ~ 121 (132)
T 3c75_A 121 P 121 (132)
T ss_dssp S
T ss_pred C
Confidence 4
No 133
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=89.02 E-value=1.6 Score=38.35 Aligned_cols=60 Identities=12% Similarity=0.307 Sum_probs=47.1
Q ss_pred eEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeec
Q 009358 214 KLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (537)
Q Consensus 214 ~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 293 (537)
.+.++.|+++||++-|. ...+.|.|.+..+ .+.+.||+.-.+.+.++++ |.|+..|.-+
T Consensus 94 ~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgi----------------k~da~PG~~n~~~~~~~kp---G~y~g~Cse~ 152 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSP--DVIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKRP---GEYRIICNQY 152 (168)
T ss_dssp SEEEETTSEEEEEEECS--SSCEEEEETTSSC----------------EEEECTTBCEEEEEECCSC---EEEEEECCSC
T ss_pred EEEEeCCCeEEEEEecC--CceEEEEECCCCe----------------EEEecCCceeEEEEEeCCC---EEEEEECCcC
Confidence 68999999999999986 3555666665433 2356799999999999988 9999999854
Q ss_pred c
Q 009358 294 A 294 (537)
Q Consensus 294 ~ 294 (537)
.
T Consensus 153 C 153 (168)
T 3s8f_B 153 C 153 (168)
T ss_dssp C
T ss_pred C
Confidence 3
No 134
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=87.64 E-value=0.19 Score=42.29 Aligned_cols=75 Identities=9% Similarity=0.156 Sum_probs=45.8
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++|+|.+-|. +|.+... ++. .|.....+.+.||+++++-+ +++ |.|++.|.
T Consensus 22 P~~i~V~~GDtVtf~n~~~-----------~H~v~~~--~~~--~P~g~~~f~s~pGet~s~TF--~~p---G~y~y~C~ 81 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK-----------GHNSALM--KGG--APEGAETWKGKINEEITVTL--SKP---GVYMYQCA 81 (127)
T ss_dssp SSEEEECTTCEEEEECSSS-----------SCCCEEC--TTC--SCTTCCCCBCCTTCCCEEEC--CSC---EEEEEECT
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--cCc--CCCCccceecCCCCEEEEEe--CCC---eEEEEEeC
Confidence 4589999999998876553 2444322 111 12111234457899877666 555 99999998
Q ss_pred eccCCCCCCCCcceEEEEEEec
Q 009358 292 PYATGQGTFDNSTVAGILEYEA 313 (537)
Q Consensus 292 ~~~~~~~~~~~~~~~ail~Y~~ 313 (537)
. .+ .....+.|....
T Consensus 82 ~--H~-----~~GM~G~I~V~~ 96 (127)
T 3tu6_A 82 P--HV-----GMGMIGAIVVGE 96 (127)
T ss_dssp T--TG-----GGTCEEEEEESS
T ss_pred C--CC-----cCCcEEEEEECc
Confidence 3 11 134677777643
No 135
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=86.97 E-value=0.39 Score=40.06 Aligned_cols=75 Identities=11% Similarity=0.201 Sum_probs=43.7
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++|+|..-+. +|.+...+ +. .|.....+.+.||+++++.+ +++ |.|++.|.
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~~--~~--~p~~~~~~~~~pG~t~~~tF--~~~---G~y~y~C~ 79 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVDK-----------GHNVESIK--DM--IPEGAEKFKSKINENYVLTV--TQP---GAYLVKCT 79 (123)
T ss_dssp SSEEEECTTCEEEEEESSS-----------SCCCEECT--TC--SCTTCCCCBCCTTCCEEEEC--CSC---EEEEEECT
T ss_pred CCEEEECCCCEEEEEECCC-----------CeEEEEec--cc--CCCCccceecCCCCEEEEEe--CCC---EEEEEEeC
Confidence 4579999999988754432 24443321 10 11111123346999877655 555 99999997
Q ss_pred eccCCCCCCCCcceEEEEEEec
Q 009358 292 PYATGQGTFDNSTVAGILEYEA 313 (537)
Q Consensus 292 ~~~~~~~~~~~~~~~ail~Y~~ 313 (537)
. .+ .....+.|....
T Consensus 80 ~--H~-----~~gM~G~I~V~~ 94 (123)
T 1paz_A 80 P--HY-----AMGMIALIAVGD 94 (123)
T ss_dssp T--TG-----GGTCEEEEEESS
T ss_pred C--cc-----cCCCEEEEEEcC
Confidence 3 22 124577777653
No 136
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=85.83 E-value=0.63 Score=38.70 Aligned_cols=72 Identities=15% Similarity=0.288 Sum_probs=43.2
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++|+|+ |... +|.+.+.. |. + |.....+.+.+|+++++-+ +++ |.|++.|.
T Consensus 20 P~~i~V~~GdtV~f~--n~d~---------~H~v~~~~--~~-~-p~~~~~~~~~~g~t~~~tF--~~~---G~y~y~C~ 79 (122)
T 2ux6_A 20 PASLKVAPGDTVTFI--PTDK---------GHNVETIK--GM-I-PDGAEAFKSKINENYKVTF--TAP---GVYGVKCT 79 (122)
T ss_dssp SSEEEECTTEEEEEE--ESSS---------SCCCEECT--TC-S-CTTCCCCBCCTTCCEEEEE--CSC---EEEEEEET
T ss_pred CCEEEECCCCEEEEE--ECCC---------CcEEEEcc--cc-c-CCCcceeecCCCCEEEEEe--CCC---EEEEEEeC
Confidence 457999999998876 4442 24443321 11 1 1111223457899877766 555 99999997
Q ss_pred eccCCCCCCCCcceEEEEEEe
Q 009358 292 PYATGQGTFDNSTVAGILEYE 312 (537)
Q Consensus 292 ~~~~~~~~~~~~~~~ail~Y~ 312 (537)
. . ....+.|...
T Consensus 80 ~--H-------~~M~G~I~V~ 91 (122)
T 2ux6_A 80 P--H-------PFMVGVVQVG 91 (122)
T ss_dssp T--E-------EEEEEEEEES
T ss_pred C--C-------ccCEEEEEEe
Confidence 4 1 1367777664
No 137
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=85.68 E-value=0.51 Score=39.35 Aligned_cols=74 Identities=14% Similarity=0.213 Sum_probs=44.1
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++|+|. |.+. +|.+... ++. .|.....+.+.+|+++++.+ +++ |.|++.|.
T Consensus 20 P~~i~V~~GdtV~f~--n~~~---------~H~v~~~--~~~--~p~~~~~~~~~pG~t~~~tF--~~~---G~y~y~C~ 79 (123)
T 1pmy_A 20 PALVRLKPGDSIKFL--PTDK---------GHNVETI--KGM--APDGADYVKTTVGQEAVVKF--DKE---GVYGFKCA 79 (123)
T ss_dssp SSEEEECTTCEEEEE--CSSS---------SCCCEEC--TTS--SCTTCCCCBCCTTSCEEEEC--CSC---EEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCC---------CcEEEEe--ccc--CCCCccceecCCCCEEEEEe--CCC---eEEEEEeC
Confidence 457999999998775 4442 3444432 110 11111233457999877655 555 99999997
Q ss_pred eccCCCCCCCCcceEEEEEEe
Q 009358 292 PYATGQGTFDNSTVAGILEYE 312 (537)
Q Consensus 292 ~~~~~~~~~~~~~~~ail~Y~ 312 (537)
. .+ .....+.|...
T Consensus 80 ~--H~-----~~gM~G~I~V~ 93 (123)
T 1pmy_A 80 P--HY-----MMGMVALVVVG 93 (123)
T ss_dssp T--TT-----TTTCEEEEEES
T ss_pred C--cc-----ccCCEEEEEEc
Confidence 3 22 13567777775
No 138
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=83.60 E-value=0.63 Score=38.86 Aligned_cols=74 Identities=9% Similarity=0.049 Sum_probs=45.2
Q ss_pred cceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEe
Q 009358 212 TFKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSAR 291 (537)
Q Consensus 212 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~ 291 (537)
+..+++++|++|+|. |.+ . .|++... |+. -|...+.+.+.+|+++++-+ +++ |.|++.|.
T Consensus 21 P~~i~V~~GDTV~f~--n~~--~-------~Hnv~~~--~~~--~p~g~~~~~~~pg~t~s~TF--~~~---G~y~Y~C~ 80 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD--K-------SHNAESV--REV--WPEGVAPVKGGFSKEVVFNA--EKE---GLYVLKCA 80 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS--S-------SCCCEEC--TTT--SCTTSCCCBCCTTCCEEEEC--CSS---EEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECC--C-------CccEEEe--CCc--CCCCccccccCCCCEEEEEe--CCC---eEEEEEcC
Confidence 458999999998775 443 1 3333322 221 12222344567999988766 555 99999997
Q ss_pred eccCCCCCCCCcceEEEEEEe
Q 009358 292 PYATGQGTFDNSTVAGILEYE 312 (537)
Q Consensus 292 ~~~~~~~~~~~~~~~ail~Y~ 312 (537)
. .+ .....+.|...
T Consensus 81 ~--H~-----~~GM~G~I~V~ 94 (124)
T 3ef4_A 81 P--HY-----GMGMVVLVQVG 94 (124)
T ss_dssp T--TG-----GGTCEEEEEES
T ss_pred C--CC-----cCCCEEEEEEC
Confidence 3 11 13467777664
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=81.44 E-value=9.6 Score=31.31 Aligned_cols=74 Identities=12% Similarity=-0.003 Sum_probs=49.4
Q ss_pred CCcEE--EEEEEecCCCCceeeEE-cCCeEEEEEe--cCCCcC--------ceEecEEEECCcceEEEEEEeCCCCCCce
Q 009358 219 PGKTY--LLRLINAALNDELFFSI-ANHSVTVVDV--DAIYIK--------SFQTDILLITPGQTTNILLKAKPSYPNAT 285 (537)
Q Consensus 219 ~G~~~--rlRliN~~~~~~~~~~i-~gh~~~via~--DG~~v~--------P~~~d~v~l~pGeR~dv~v~~~~~~~~g~ 285 (537)
.|+.+ .|.+.|.+.... .+.+ .|+.+.++-. +|..+- .+......|.|||...+-...++..+.|.
T Consensus 16 ~g~~v~~~ltv~N~s~~~v-~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAI-EFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSCE-EEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCcE-EEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45544 466778886443 3555 4666555444 465441 34567999999999999999995333399
Q ss_pred EEEEEeec
Q 009358 286 FLMSARPY 293 (537)
Q Consensus 286 y~i~~~~~ 293 (537)
|.+++...
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99998753
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=71.84 E-value=33 Score=28.05 Aligned_cols=63 Identities=10% Similarity=0.223 Sum_probs=40.8
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCc---ccccccCCCCeEEEEEEeCC--CccceEEecch
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAY---ITQCPIQTGQSYVYNFTISG--QRGTLFWHAHI 133 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~---vtq~~i~PG~~~~y~f~~~~--~~Gt~wYH~h~ 133 (537)
=+|+..-|.+..+.|.+...+ ..| .|+||-.+ +....|+||++.+|+...++ .+|+|..+.=.
T Consensus 34 v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~l 101 (120)
T 3isy_A 34 IEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVTF 101 (120)
T ss_dssp EEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEEE
Confidence 367777777777777765221 111 24666432 23456999999999999963 58999876543
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=68.27 E-value=13 Score=33.53 Aligned_cols=61 Identities=11% Similarity=0.112 Sum_probs=45.1
Q ss_pred eEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeec
Q 009358 214 KLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (537)
Q Consensus 214 ~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 293 (537)
.+.+..|+.+||+|.+.. ..+.|.|...... +...||..-.+.+.++++ |.|+..|.-+
T Consensus 42 ~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK----------------~daiPGr~n~l~~~~~~p---G~y~g~CsE~ 100 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQ----------------IYAMAGMQTRLHLIANEP---GTYDGICAEI 100 (205)
T ss_dssp EEEEETTSCEEEEEEESS--SCEEEEEGGGTEE----------------EEECTTCCEEEEECCSSS---EEEEEEECSC
T ss_pred eEEEeCCCEEEEEEecCC--ceeeEEecccCcE----------------EEecCCceEEEEEEeCCC---eEEEEEcccc
Confidence 689999999999998764 4455666544332 345578888888888887 9999999855
Q ss_pred cC
Q 009358 294 AT 295 (537)
Q Consensus 294 ~~ 295 (537)
+.
T Consensus 101 CG 102 (205)
T 1cyx_A 101 CG 102 (205)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=68.27 E-value=12 Score=33.85 Aligned_cols=75 Identities=12% Similarity=-0.017 Sum_probs=52.8
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecch-hhhh-
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWLR- 137 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~-~~~~- 137 (537)
..|.+..|+.|++.|++. +.- ||...... | -+.-+-||+.-+..|.+ +++|+|+..|.. .+..
T Consensus 41 n~l~lP~g~~V~~~lTS~-DVi-----HSF~IP~l----g----vK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVM-----HSFFIPRL----G----SQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSC-----EEEEEGGG----T----EEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecC-Cce-----eeEEeccc----C----cEEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 479999999999999987 222 33332211 1 12235679999999986 899999999874 4444
Q ss_pred ccceeeEEEc-CC
Q 009358 138 ATVYGPLVIF-PK 149 (537)
Q Consensus 138 ~Gl~G~liV~-~~ 149 (537)
..|.+.++|. +.
T Consensus 106 s~M~~~v~vv~~~ 118 (205)
T 1cyx_A 106 SGMKFKAIATPDR 118 (205)
T ss_dssp TTCCEEEEEESSH
T ss_pred hhceEEEEEECCH
Confidence 6788888887 44
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=56.76 E-value=27 Score=33.56 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=52.2
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecch-hhhh-
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWLR- 137 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~-~~~~- 137 (537)
..|.+..|+.|++.+++.. .- |+...+.- | + +.-+-||..-+..|.+ +++|+|+..|.. .+..
T Consensus 189 N~lvlP~g~~V~~~ltS~D-Vi-----Hsf~iP~l----g---~-k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VI-----HAWTIPAF----A---V-KQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SC-----EEEEEGGG----T---E-EEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC-cc-----ceeeEccc----C---c-eEEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 5799999999999999963 22 23222111 1 1 1224578888899986 899999999974 4443
Q ss_pred ccceeeEEEcCCC
Q 009358 138 ATVYGPLVIFPKR 150 (537)
Q Consensus 138 ~Gl~G~liV~~~~ 150 (537)
..|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 6777777777654
No 144
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=54.68 E-value=30 Score=32.59 Aligned_cols=76 Identities=12% Similarity=0.120 Sum_probs=52.1
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecch-hhhh-
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWLR- 137 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~-~~~~- 137 (537)
..|.+..|+.|++.+++. +.- ||...... | + +.-+-||+.-+..|.+ +++|+|+..|.. .+..
T Consensus 171 n~l~lP~g~~v~~~~tS~-DVi-----Hsf~ip~l----~---~-k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVI-----HSWTVPAF----G---V-KQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSC-----EEEEEGGG----T---E-EEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEEC-ccc-----ceeeeccc----C---c-eEEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 469999999999999987 222 33332211 1 1 1224578888889986 899999999874 4443
Q ss_pred ccceeeEEEcCCC
Q 009358 138 ATVYGPLVIFPKR 150 (537)
Q Consensus 138 ~Gl~G~liV~~~~ 150 (537)
..|.+.+.|.+++
T Consensus 236 ~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 236 AYMPITVKVVSEE 248 (262)
T ss_dssp GGCCEEEEEECHH
T ss_pred ccCeEEEEEEcHH
Confidence 6787777777643
No 145
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=51.69 E-value=36 Score=27.50 Aligned_cols=47 Identities=21% Similarity=0.385 Sum_probs=32.0
Q ss_pred cEEEEEEEecCCCC-ceeeEEcCC-eEEEEEecCCCcCceEecEEEECCcceEEEEEEe
Q 009358 221 KTYLLRLINAALND-ELFFSIANH-SVTVVDVDAIYIKSFQTDILLITPGQTTNILLKA 277 (537)
Q Consensus 221 ~~~rlRliN~~~~~-~~~~~i~gh-~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~ 277 (537)
..|+|+|+|.+... .+.+++.|. .+.++ | + ..+.|.+||..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 47999999999776 456777764 23332 2 1 14999999977665544
No 146
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=46.15 E-value=74 Score=31.10 Aligned_cols=16 Identities=19% Similarity=0.459 Sum_probs=14.5
Q ss_pred ccccCCCCeEEEEEEe
Q 009358 105 QCPIQTGQSYVYNFTI 120 (537)
Q Consensus 105 q~~i~PG~~~~y~f~~ 120 (537)
..||+|||+.+.+..+
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 4689999999999998
No 147
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=45.55 E-value=80 Score=24.40 Aligned_cols=70 Identities=16% Similarity=0.107 Sum_probs=40.0
Q ss_pred EEeCCcEEEEEEEecCCCCceeeEEcCC---eEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEee
Q 009358 216 KVKPGKTYLLRLINAALNDELFFSIANH---SVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (537)
Q Consensus 216 ~v~~G~~~rlRliN~~~~~~~~~~i~gh---~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 292 (537)
--+|||++++|++-...... .... .+++..-+|..+. .-.........++..+.++..+.-|.|.|++..
T Consensus 12 iYrPGetV~~~~~~~~~~~~----p~~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDENFH----PLNELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGGGC----BCCCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCCCc----CCCCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 36899999999875543211 1122 3444444554221 112222345567777777665445999999874
No 148
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=44.63 E-value=72 Score=29.91 Aligned_cols=61 Identities=15% Similarity=0.226 Sum_probs=45.0
Q ss_pred eEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeec
Q 009358 214 KLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (537)
Q Consensus 214 ~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 293 (537)
.+.++.|+.+||++-+.. ..+.|.+.+.... +..-||..-.+.+.++++ |.|...|.-+
T Consensus 172 ~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k----------------~da~PG~~n~~~~~~~~~---G~y~g~Cse~ 230 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVK----------------QDAVPGRLAQLWFRAERE---GIFFGQCSEL 230 (262)
T ss_dssp CEEEETTSEEEEEEEESS--SCEEEEEGGGTEE----------------EEECBTCCEEEEEECCSC---EEEEECCCSC
T ss_pred eEEEecCCEEEEEEEECc--ccceeeecccCce----------------EEecCCceeEEEEecCCc---EEEEEEChHh
Confidence 689999999999998654 4455666544332 234578888888888888 9999999854
Q ss_pred cC
Q 009358 294 AT 295 (537)
Q Consensus 294 ~~ 295 (537)
+.
T Consensus 231 CG 232 (262)
T 2gsm_B 231 CG 232 (262)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 149
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=44.48 E-value=37 Score=28.05 Aligned_cols=70 Identities=17% Similarity=0.337 Sum_probs=39.5
Q ss_pred EEEcCcCCCceEEEecCCEEEEEEEecCC---CC--ceeEe--cCccccCC-CCCCCCCcccccccCCCCeEEEEEEeC
Q 009358 51 ITVNGQFPGPRIVAREGDRLIIKVVNHVP---NN--ISIHW--HGIRQLLS-GWADGPAYITQCPIQTGQSYVYNFTIS 121 (537)
Q Consensus 51 ~~~NG~~PgP~i~v~~Gd~v~v~v~N~l~---~~--~siH~--HG~~~~~~-~~~DGv~~vtq~~i~PG~~~~y~f~~~ 121 (537)
+.|+|=-+.+.=.+..|..+.|.+.=..+ .. +.+|+ .|+..... ...|+=.+ +.|||.+|+.++|.+.++
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEeE
Confidence 34444213455677888888888772222 22 22332 34443321 11233222 579999999999998763
No 150
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=40.81 E-value=84 Score=30.05 Aligned_cols=62 Identities=13% Similarity=0.200 Sum_probs=45.8
Q ss_pred ceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEee
Q 009358 213 FKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (537)
Q Consensus 213 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 292 (537)
.++.+..|+++||++-+.. ..+.|.|...... +..-||..-.+.+.++++ |.|..+|.-
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~k----------------~daiPG~~n~~~~~~~~~---G~y~g~CsE 247 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAVK----------------QDAVPGRIAQLWFSVDQE---GVYFGQCSE 247 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTEE----------------EEECTTCCEEEEEECSSS---EEEEECCCS
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCce----------------EEecCCceEEEEEEeCCC---EEEEEEccc
Confidence 3689999999999998754 4455666544332 335678888888989888 999999985
Q ss_pred ccC
Q 009358 293 YAT 295 (537)
Q Consensus 293 ~~~ 295 (537)
++.
T Consensus 248 ~CG 250 (298)
T 3hb3_B 248 LCG 250 (298)
T ss_dssp CCS
T ss_pred ccC
Confidence 443
No 151
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=39.12 E-value=28 Score=28.85 Aligned_cols=49 Identities=16% Similarity=0.186 Sum_probs=27.0
Q ss_pred EEEEEecCCCC---ceeEecCccccCC---CCCCCCCcccccccCCCCeEEEEEEe
Q 009358 71 IIKVVNHVPNN---ISIHWHGIRQLLS---GWADGPAYITQCPIQTGQSYVYNFTI 120 (537)
Q Consensus 71 ~v~v~N~l~~~---~siH~HG~~~~~~---~~~DGv~~vtq~~i~PG~~~~y~f~~ 120 (537)
+|++.|....+ .+=||.=....+. -.-+||-| .|--|.||++|+|.=-.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg~ 88 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTSGV 88 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeCCc
Confidence 47777876654 3457763222111 01245432 24458999988887544
No 152
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=38.17 E-value=40 Score=27.80 Aligned_cols=63 Identities=17% Similarity=0.212 Sum_probs=36.4
Q ss_pred CceEEEecCCEEEEEEEecC---CCCceeEe----cCccccC-CCCCCCCCcccccccCCCCeEEEEEEeC
Q 009358 59 GPRIVAREGDRLIIKVVNHV---PNNISIHW----HGIRQLL-SGWADGPAYITQCPIQTGQSYVYNFTIS 121 (537)
Q Consensus 59 gP~i~v~~Gd~v~v~v~N~l---~~~~siH~----HG~~~~~-~~~~DGv~~vtq~~i~PG~~~~y~f~~~ 121 (537)
.+.=.++.|..+.|.+.=.. ........ .|+.... ....|+=..-+.|||.+|+.++|.+.++
T Consensus 25 ~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 25 TQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 35566788888888877222 22222222 3444321 1113443222479999999999998874
No 153
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=37.66 E-value=67 Score=29.39 Aligned_cols=75 Identities=12% Similarity=-0.011 Sum_probs=49.6
Q ss_pred ceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCccceEEecch-hhhh-
Q 009358 60 PRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVYNFTISGQRGTLFWHAHI-SWLR- 137 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~~~~Gt~wYH~h~-~~~~- 137 (537)
..+.+..|..|++.++... .-+|...-.+..+ +| .-||+.-+..|.+ +++|+|+..|.. .|..
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-ViHsf~vP~lg~K----~D---------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VLHSWAVPSLGLK----TD---------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SCEEEEEGGGTEE----EE---------ECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeCc-ccceeeecccCcE----EE---------ecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 6899999999999999862 2222222211111 23 3468888888986 899999999864 3333
Q ss_pred ccceeeEEEcCC
Q 009358 138 ATVYGPLVIFPK 149 (537)
Q Consensus 138 ~Gl~G~liV~~~ 149 (537)
.-|.+.+.+.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 567666666654
No 154
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=36.55 E-value=27 Score=28.88 Aligned_cols=49 Identities=20% Similarity=0.198 Sum_probs=26.8
Q ss_pred EEEEEecCCCC---ceeEecCccccCC---CCCCCCCcccccccCCCCeEEEEEEe
Q 009358 71 IIKVVNHVPNN---ISIHWHGIRQLLS---GWADGPAYITQCPIQTGQSYVYNFTI 120 (537)
Q Consensus 71 ~v~v~N~l~~~---~siH~HG~~~~~~---~~~DGv~~vtq~~i~PG~~~~y~f~~ 120 (537)
+|++.|....+ .+=||.=....+. -.-+||-| .|--|.||++|+|.=-.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVG-EQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTT-BCCEECTTCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEc-CCCcCCCCCceEEeCCc
Confidence 47777876554 3457753221111 00245432 24458999988887554
No 155
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=31.84 E-value=80 Score=28.87 Aligned_cols=61 Identities=7% Similarity=0.041 Sum_probs=43.2
Q ss_pred ceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEee
Q 009358 213 FKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (537)
Q Consensus 213 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 292 (537)
.++.+..|+.+|+.+-.+. -.+.|.+.....+ +..-||..-.+-+.++++ |.|...|.-
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~K----------------~DaiPGr~n~~~~~~~~~---G~y~g~Cse 198 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVPSLGLK----------------TDAIPGRLNQTTLMSSRP---GLYYGQCSE 198 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEGGGTEE----------------EEECTTCCEEEEECCSSC---EEEEECCCS
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeecccCcE----------------EEecCCceEEEEEecCCc---EEEEEEehh
Confidence 3688999999999887644 4455666544332 234567777778888887 999999985
Q ss_pred cc
Q 009358 293 YA 294 (537)
Q Consensus 293 ~~ 294 (537)
++
T Consensus 199 ~C 200 (227)
T 1v54_B 199 IC 200 (227)
T ss_dssp CC
T ss_pred hc
Confidence 43
No 156
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=31.78 E-value=39 Score=28.43 Aligned_cols=44 Identities=23% Similarity=0.350 Sum_probs=0.0
Q ss_pred EEEEEecCCCC---ceeEec-----CccccCCCCCCCCCcccccccCCCCeEEEE
Q 009358 71 IIKVVNHVPNN---ISIHWH-----GIRQLLSGWADGPAYITQCPIQTGQSYVYN 117 (537)
Q Consensus 71 ~v~v~N~l~~~---~siH~H-----G~~~~~~~~~DGv~~vtq~~i~PG~~~~y~ 117 (537)
+|++.|....+ .+=||. |-.+... -+||-| .|--|.||++|+|.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~--G~GVVG-eqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVR--GLGVVG-QQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEE--EESSSS-CCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEE--CCCeec-CCCcCCCCCceEEc
No 157
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=31.52 E-value=52 Score=30.26 Aligned_cols=50 Identities=26% Similarity=0.390 Sum_probs=35.8
Q ss_pred ceEEEecCCEEEEEEEecCC------CCceeEecCccccCCCCCCCCCcccccccCCCCeEEE
Q 009358 60 PRIVAREGDRLIIKVVNHVP------NNISIHWHGIRQLLSGWADGPAYITQCPIQTGQSYVY 116 (537)
Q Consensus 60 P~i~v~~Gd~v~v~v~N~l~------~~~siH~HG~~~~~~~~~DGv~~vtq~~i~PG~~~~y 116 (537)
.+|+.+-|-+|.|.|.|..+ .+.++...|......+ -++.-+.|||++|.
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~a-------G~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTA-------GSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECT-------TCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCC-------CCEEEECCCCeEec
Confidence 58999999999999999863 3566666676644332 13456899998763
No 158
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=31.29 E-value=2e+02 Score=23.06 Aligned_cols=68 Identities=13% Similarity=0.036 Sum_probs=37.3
Q ss_pred CceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCCC----cc----cccccCCCCeEEEEEEeCCCccce
Q 009358 59 GPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGPA----YI----TQCPIQTGQSYVYNFTISGQRGTL 127 (537)
Q Consensus 59 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~----~v----tq~~i~PG~~~~y~f~~~~~~Gt~ 127 (537)
|-+|.++.||++.|.|.-+-....+=..........--.+|.. .+ ....+..|....+.|++ ..+|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 4589999999999999976543333222221100000011110 00 01125567899999998 678863
No 159
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=29.20 E-value=35 Score=28.53 Aligned_cols=49 Identities=16% Similarity=0.119 Sum_probs=26.6
Q ss_pred EEEEEecCCCC---ceeEecCccccCC---CCCCCCCcccccccCCCCeEEEEEEe
Q 009358 71 IIKVVNHVPNN---ISIHWHGIRQLLS---GWADGPAYITQCPIQTGQSYVYNFTI 120 (537)
Q Consensus 71 ~v~v~N~l~~~---~siH~HG~~~~~~---~~~DGv~~vtq~~i~PG~~~~y~f~~ 120 (537)
+|++.|....+ .+=||.=....+. -.-+||-| .|--|.||++|+|.=-.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-eqP~L~PGe~F~YtSg~ 87 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVG-ETPTIPPNTAYQYTSGT 87 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTT-BCCEECTTEEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEc-CCCcCCCCCceEEcCCc
Confidence 46677776554 3457753221111 00245432 24458999988887554
No 160
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=29.17 E-value=93 Score=28.60 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=28.8
Q ss_pred ceEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEE
Q 009358 213 FKLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNI 273 (537)
Q Consensus 213 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv 273 (537)
..|..+-|-...++|-|.+....+. . .--.|..||....=.....|.|.|||++.+
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~----~-~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTA----D-SDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBC----C-SCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCcccc----C-CCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 3455555555556666665432211 1 122234555421111246899999999876
No 161
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=26.81 E-value=64 Score=31.16 Aligned_cols=60 Identities=13% Similarity=0.162 Sum_probs=43.6
Q ss_pred eEEEeCCcEEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEeec
Q 009358 214 KLKVKPGKTYLLRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARPY 293 (537)
Q Consensus 214 ~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~~ 293 (537)
.+.+..|+++||++-... ..+.|.|.+... .+..-||..-.+.+.++++ |.|...|.-+
T Consensus 152 ~l~lP~g~~V~~~lTS~D--ViHsf~IP~lg~----------------k~DaiPGr~n~~~~~~~~~---G~y~g~CsE~ 210 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS--VMNSFFIPRLGS----------------QIYAMAGMQTRLHLIANEP---GTYDGISASY 210 (315)
T ss_dssp BCCCCSSSEEEEEECBSS--SCEEEEEGGGTE----------------EEEECBTSCEEEEEECCSC---BCCEEBCCSC
T ss_pred eEEEeCCCEEEEEEEeCC--ccceeeecccCc----------------EEeecCCcceeeEEecCCC---eEEEEecccc
Confidence 578999999999886543 445566654433 3335578888888888888 9999999854
Q ss_pred c
Q 009358 294 A 294 (537)
Q Consensus 294 ~ 294 (537)
+
T Consensus 211 C 211 (315)
T 1fft_B 211 S 211 (315)
T ss_dssp C
T ss_pred c
Confidence 4
No 162
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=26.54 E-value=1.1e+02 Score=24.94 Aligned_cols=59 Identities=22% Similarity=0.228 Sum_probs=37.0
Q ss_pred eEEEecC-CEEEEEEEecCCCCcee--EecCccccCCCCCC-----C----CCcccccccCCCCeEEEEEE
Q 009358 61 RIVAREG-DRLIIKVVNHVPNNISI--HWHGIRQLLSGWAD-----G----PAYITQCPIQTGQSYVYNFT 119 (537)
Q Consensus 61 ~i~v~~G-d~v~v~v~N~l~~~~si--H~HG~~~~~~~~~D-----G----v~~vtq~~i~PG~~~~y~f~ 119 (537)
.|++++| .+++|+|.|..+++.-+ |+|=.+....-..| | .|.-|-.-..||++.+.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5888888 68999999999887654 66644432210011 1 23233345678888887775
No 163
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=26.54 E-value=1.1e+02 Score=24.94 Aligned_cols=59 Identities=22% Similarity=0.228 Sum_probs=37.0
Q ss_pred eEEEecC-CEEEEEEEecCCCCcee--EecCccccCCCCCC-----C----CCcccccccCCCCeEEEEEE
Q 009358 61 RIVAREG-DRLIIKVVNHVPNNISI--HWHGIRQLLSGWAD-----G----PAYITQCPIQTGQSYVYNFT 119 (537)
Q Consensus 61 ~i~v~~G-d~v~v~v~N~l~~~~si--H~HG~~~~~~~~~D-----G----v~~vtq~~i~PG~~~~y~f~ 119 (537)
.|++++| .+++|+|.|..+++.-+ |+|=.+....-..| | .|.-|-.-..||++.+.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5888888 68999999999887654 66644432210011 1 23233345678888887775
No 164
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=26.29 E-value=22 Score=27.88 Aligned_cols=24 Identities=29% Similarity=0.257 Sum_probs=21.0
Q ss_pred EEEEEcCcCCCceEEEecCCEEEE
Q 009358 49 SIITVNGQFPGPRIVAREGDRLII 72 (537)
Q Consensus 49 ~~~~~NG~~PgP~i~v~~Gd~v~v 72 (537)
..+.+||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 568999998768888999999987
No 165
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=24.82 E-value=28 Score=25.45 Aligned_cols=24 Identities=17% Similarity=0.354 Sum_probs=20.6
Q ss_pred EEEEEcCcC-CCceEEEecCCEEEE
Q 009358 49 SIITVNGQF-PGPRIVAREGDRLII 72 (537)
Q Consensus 49 ~~~~~NG~~-PgP~i~v~~Gd~v~v 72 (537)
-.+.+||++ ++..-.++.||+|.|
T Consensus 43 ~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 43 CAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp CEEEESSSEECCTTCCCCTTCEEEE
T ss_pred cEEEECCEEcCCCCcCCCCCCEEEE
Confidence 468899999 888888999999876
No 166
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=24.54 E-value=2.9e+02 Score=22.64 Aligned_cols=65 Identities=12% Similarity=0.149 Sum_probs=36.5
Q ss_pred CceEEEecCCEEEEEEEecCCCCceeEecCccccCCCCCCCC--------CcccccccCCCCeEEEEEEeCCCccce
Q 009358 59 GPRIVAREGDRLIIKVVNHVPNNISIHWHGIRQLLSGWADGP--------AYITQCPIQTGQSYVYNFTISGQRGTL 127 (537)
Q Consensus 59 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv--------~~vtq~~i~PG~~~~y~f~~~~~~Gt~ 127 (537)
|-+|.++.||++.|.|.-+-....+=...... ...-.|++ |.- ...+..|....+.|++ ..+|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~~--~~~L~~~~~~v~~~y~p~~-~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGGT--KESPNESMFTVENKYFPPD-SKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTTB--SSCSCTTTEEEEEEEECCT-TCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecCC--CccccccceeecceeeeCC-CCCcCCCcEEEEEEEE-ccCceE
Confidence 56899999999999998764322221111110 00001221 100 1135567888888987 677864
No 167
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=24.25 E-value=60 Score=26.73 Aligned_cols=51 Identities=12% Similarity=0.122 Sum_probs=30.8
Q ss_pred EEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC----ceEecEEEECCcceEEEEE
Q 009358 222 TYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK----SFQTDILLITPGQTTNILL 275 (537)
Q Consensus 222 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~v~l~pGeR~dv~v 275 (537)
.|++||-|.+... ..|-...+.|...||..-+ ......=.|.|||.+...=
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSS 85 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeC
Confidence 5789999998643 4555566666666664321 1222344688888665543
No 168
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=24.19 E-value=24 Score=29.26 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=18.2
Q ss_pred eEEEeCCcEEEEEEEecCCCCce
Q 009358 214 KLKVKPGKTYLLRLINAALNDEL 236 (537)
Q Consensus 214 ~~~v~~G~~~rlRliN~~~~~~~ 236 (537)
-|.|+.||++||.+.|-+..+.+
T Consensus 72 ~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp EEEEETTCEEEEEETTEEEEEEE
T ss_pred EEEecCCCEEEEEeCCcEEEEEE
Confidence 38999999999999888744443
No 169
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=24.08 E-value=86 Score=24.65 Aligned_cols=52 Identities=12% Similarity=0.164 Sum_probs=33.3
Q ss_pred CEEEEEEEecCCCCc---eeEecC--ccccCCCCCCCCCcccccccCCCCeEEEEEEeC-CCccce
Q 009358 68 DRLIIKVVNHVPNNI---SIHWHG--IRQLLSGWADGPAYITQCPIQTGQSYVYNFTIS-GQRGTL 127 (537)
Q Consensus 68 d~v~v~v~N~l~~~~---siH~HG--~~~~~~~~~DGv~~vtq~~i~PG~~~~y~f~~~-~~~Gt~ 127 (537)
=.++|+|+|-|+.+. .++..| +... . -+....|.||++..+++... ..+|..
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~-~-------~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGLQRP-K-------ILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTTEEE-E-------EEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCCCcc-e-------EEEcCcCCCCCEEEEEEEEecCcccce
Confidence 357889999997653 455554 4322 1 11123599999999999873 556653
No 170
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=23.24 E-value=2.8e+02 Score=26.91 Aligned_cols=49 Identities=12% Similarity=0.158 Sum_probs=34.1
Q ss_pred CeEEEEEecCCCc----------CceEecEEEECCcceEEEEEEeCCC---CCCceEEEEEee
Q 009358 243 HSVTVVDVDAIYI----------KSFQTDILLITPGQTTNILLKAKPS---YPNATFLMSARP 292 (537)
Q Consensus 243 h~~~via~DG~~v----------~P~~~d~v~l~pGeR~dv~v~~~~~---~~~g~y~i~~~~ 292 (537)
..|.| ..||..+ .|-.-+-+.|+|||++++.+++... ..+|.|.+++..
T Consensus 66 ~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~~g 127 (343)
T 2x3c_A 66 PLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMSAQGQYSIRYQL 127 (343)
T ss_dssp CCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCCSCEEEEEEEC-
T ss_pred ceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccCCCceEEEEEee
Confidence 34555 4676543 1333478999999999999999752 125899999874
No 171
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=22.83 E-value=76 Score=26.16 Aligned_cols=50 Identities=14% Similarity=0.191 Sum_probs=29.6
Q ss_pred EEEEEEEecCCCCceeeEEcCCeEEEEEecCCCc----CceEecEEEECCcceEEEE
Q 009358 222 TYLLRLINAALNDELFFSIANHSVTVVDVDAIYI----KSFQTDILLITPGQTTNIL 274 (537)
Q Consensus 222 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~v~l~pGeR~dv~ 274 (537)
.|++||-|.+... +.|-...+.|...||..- +......=.|.|||.+...
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEe
Confidence 5789999998643 345555566665555421 1122234468888866554
No 172
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=22.21 E-value=67 Score=26.78 Aligned_cols=51 Identities=12% Similarity=0.173 Sum_probs=30.7
Q ss_pred EEEEEEEecCCCCceeeEEcCCeEEEEEecCCCcC----ceEecEEEECCcceEEEEE
Q 009358 222 TYLLRLINAALNDELFFSIANHSVTVVDVDAIYIK----SFQTDILLITPGQTTNILL 275 (537)
Q Consensus 222 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~v~l~pGeR~dv~v 275 (537)
.|++||-|.+... +.|-...+.|...||..-+ .+....=.|.|||.+...=
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtS 85 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTS 85 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcC
Confidence 5789999998643 4455556666666664321 1222344788888665543
No 173
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=22.09 E-value=3.2e+02 Score=22.22 Aligned_cols=67 Identities=12% Similarity=0.072 Sum_probs=43.5
Q ss_pred EEeCCcEEE--EEEEecCCCCceeeEEcCCeEEEEEecCCCcCceEecEEEECCcceEEEEEEeCCCCCCceEEEEEee
Q 009358 216 KVKPGKTYL--LRLINAALNDELFFSIANHSVTVVDVDAIYIKSFQTDILLITPGQTTNILLKAKPSYPNATFLMSARP 292 (537)
Q Consensus 216 ~v~~G~~~r--lRliN~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~~g~y~i~~~~ 292 (537)
.+++|+.+. ..+.|.|....-.+.+ .+ -.||..+. ...+.|++|+.-.|.+...... .|.|.+.+..
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~l-yvng~~v~---t~~v~La~G~s~tv~f~~~~~~-~G~~~v~AvV 96 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RV-YINGTLYK---NWTVSLGPKEEKVLTFNWTPTQ-EGMYRINATV 96 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EE-EETTEEEE---EEEEEECTTCEEEEEEEECCSS-CEEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EE-EECCEEEe---eEEeccCCCCeEEEEEEEEcCC-CcEEEEEEEE
Confidence 677888665 5577999766443332 22 23665432 2355799999998888876422 2899888875
No 174
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=22.07 E-value=43 Score=27.69 Aligned_cols=17 Identities=6% Similarity=0.221 Sum_probs=16.1
Q ss_pred eEEEecCCEEEEEEEec
Q 009358 61 RIVAREGDRLIIKVVNH 77 (537)
Q Consensus 61 ~i~v~~Gd~v~v~v~N~ 77 (537)
-|.|+.|++|++.+.|.
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 59999999999999998
No 175
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=20.17 E-value=1.6e+02 Score=22.48 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=14.9
Q ss_pred CCCCCccccCCC--eeEEeecCCC
Q 009358 476 AESHPLHLHGFN--FFVIGQGFGN 497 (537)
Q Consensus 476 ~~~HP~HLHGh~--F~Vl~~g~G~ 497 (537)
+..-+||.|.+. +|+|-.|.+.
T Consensus 27 G~~~~~H~H~~~~e~~~v~~G~~~ 50 (98)
T 3lag_A 27 GSATGHHTHGMDYVVVPMADGEMT 50 (98)
T ss_dssp TEECCSEECCSCEEEEESSCBC-C
T ss_pred CCccCcEECCCcEEEEEEeccEEE
Confidence 467899999987 4555555443
Done!