BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009360
(536 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZX3|A Chain A, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39
pdb|3ZX3|B Chain B, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39
pdb|3ZX3|C Chain C, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39
pdb|3ZX3|D Chain D, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39
Length = 452
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 201/438 (45%), Gaps = 57/438 (13%)
Query: 75 PSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRL-------NPGLSSYAVNPTN 127
P +VKYG++LD GS+ T ++++ + E + D G ++ PG+S YA
Sbjct: 30 PENVKYGIVLDAGSSHTNLYIYKWPAEKEN---DTGVVQQLEECQVKGPGISKYAQKTDE 86
Query: 128 AGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQ---DKILDSCRRVLRVSG 184
L + + + ++P + T + L ATAG+RL+ + + D++L + R L+
Sbjct: 87 IAAYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYP 146
Query: 185 FRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPL- 243
F F A +ITG +EG Y WI NY LG T G ++LGGAS Q+TFV PL
Sbjct: 147 FDFQG--AKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFV---PLN 201
Query: 244 ----PQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQ---KG 296
E S + Y +Y+HSFL +G++ A + A+ +Q G
Sbjct: 202 STLEAPETSLQFRLYGTDYTVYTHSFLCYGKDQAL-----------WQKLAQDIQVSSGG 250
Query: 297 TYIDPCSPKGYLHHVESSP--GSLAAK-------IDLSTLQAGGNFSECRSAALTLLQNG 347
DPC GY V S G+ K + +Q G++ +C + L + N
Sbjct: 251 ILKDPCFYPGYKKVVNVSELYGTPCTKRFEKKLPFNQFQVQGTGDYEQCHQSILKIFNN- 309
Query: 348 KEKCSYKSCYLGSTFMPKLRGKFLATENFFHTSKFFGLHQRAFLS---HLLMAGEQFCGE 404
C Y C F+P L+G F A F+ FF +S + + FC +
Sbjct: 310 -SHCPYSQCAFNGVFLPPLQGSFGAFSAFYFVMDFFKKMANDSVSSQEKMTEITKNFCSK 368
Query: 405 DWSKLKKKHQSLDDEDLLRYCFSSAYIVALL---HDSLGISLDDERIGFANQVENIPLDW 461
W ++K + ++ ++ L YCFS YI++LL ++ G S D +I F ++++ W
Sbjct: 369 PWEEVKASYPTVKEKYLSEYCFSGTYILSLLLQGYNFTGTSWD--QIHFMGKIKDSNAGW 426
Query: 462 ALGAFILQSTAVLDELHP 479
LG ++L T ++ P
Sbjct: 427 TLG-YMLNLTNMIPAEQP 443
>pdb|3ZX0|A Chain A, Ntpdase1 In Complex With Heptamolybdate
pdb|3ZX0|B Chain B, Ntpdase1 In Complex With Heptamolybdate
pdb|3ZX0|C Chain C, Ntpdase1 In Complex With Heptamolybdate
pdb|3ZX0|D Chain D, Ntpdase1 In Complex With Heptamolybdate
pdb|3ZX2|A Chain A, Ntpdase1 In Complex With Decavanadate
pdb|3ZX2|B Chain B, Ntpdase1 In Complex With Decavanadate
pdb|3ZX2|C Chain C, Ntpdase1 In Complex With Decavanadate
pdb|3ZX2|D Chain D, Ntpdase1 In Complex With Decavanadate
Length = 452
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 201/438 (45%), Gaps = 57/438 (13%)
Query: 75 PSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRL-------NPGLSSYAVNPTN 127
P +VKYG++LD GS+ T ++++ + E + D G ++ PG+S YA
Sbjct: 30 PENVKYGIVLDAGSSHTNLYIYKWPAEKEN---DTGVVQQLEECQVKGPGISKYAQKTDE 86
Query: 128 AGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQ---DKILDSCRRVLRVSG 184
L + + + ++P + T + L ATAG+RL+ + + D++L + R L+
Sbjct: 87 IAAYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYP 146
Query: 185 FRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPL- 243
F F A +ITG +EG Y WI NY LG T G ++LGG+S Q+TFV PL
Sbjct: 147 FDFQG--AKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGSSTQITFV---PLN 201
Query: 244 ----PQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQ---KG 296
E S + Y +Y+HSFL +G++ A + A+ +Q G
Sbjct: 202 STLEAPETSLQFRLYGTDYTVYTHSFLCYGKDQAL-----------WQKLAQDIQVSSGG 250
Query: 297 TYIDPCSPKGYLHHVESSP--GSLAAK-------IDLSTLQAGGNFSECRSAALTLLQNG 347
DPC GY V S G+ K + +Q G++ +C + L + N
Sbjct: 251 ILKDPCFYPGYKKVVNVSELYGTPCTKRFEKKLPFNQFQVQGTGDYEQCHQSILKIFNN- 309
Query: 348 KEKCSYKSCYLGSTFMPKLRGKFLATENFFHTSKFFGLHQRAFLS---HLLMAGEQFCGE 404
C Y C F+P L+G F A F+ FF +S + + FC +
Sbjct: 310 -SHCPYSQCAFNGVFLPPLQGSFGAFSAFYFVMDFFKKMANDSVSSQEKMTEITKNFCSK 368
Query: 405 DWSKLKKKHQSLDDEDLLRYCFSSAYIVALL---HDSLGISLDDERIGFANQVENIPLDW 461
W ++K + ++ ++ L YCFS YI++LL ++ G S D +I F ++++ W
Sbjct: 369 PWEEVKASYPTVKEKYLSEYCFSGTYILSLLLQGYNFTGTSWD--QIHFMGKIKDSNAGW 426
Query: 462 ALGAFILQSTAVLDELHP 479
LG ++L T ++ P
Sbjct: 427 TLG-YMLNLTNMIPAEQP 443
>pdb|3CJ1|A Chain A, Structure Of Rattus Norvegicus Ntpdase2
pdb|3CJ7|A Chain A, Structure Of Rattus Norvegicus Ntpdase2 In Complex With
Amp
pdb|3CJ9|A Chain A, Structure Of Rattus Norvegicus Ntpdase2 In Complex With
Calcium, Amp And Phosphate
pdb|3CJA|A Chain A, Structure Of Rattus Norvegicus Ntpdase2 In Complex With
Calcium And Amppnp
Length = 456
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 198/428 (46%), Gaps = 55/428 (12%)
Query: 75 PSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMR----LNPGLSSYAVNPTNAGD 130
P ++KYG++LD GS+ T + V+ + + + +G G+SSYA +P+ AG
Sbjct: 30 PPALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQ 89
Query: 131 SLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQD---KILDSCRRVLRVSGFRF 187
SL L+ A R VP A T + L ATAG+RL+++ + ++L++ + L F F
Sbjct: 90 SLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDF 149
Query: 188 ADDWATVITGSDEGVYAWIVANYAL------GTLGG--DPSE-TTGIIELGGASVQVTFV 238
A +++G DEGV+ W+ ANY L G +G P + T G ++LGGAS Q+TF
Sbjct: 150 RG--ARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFE 207
Query: 239 SDEPLPQEFSRT-LKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGT 297
+ P + L+ Y +Y+HSFL +G++ + L LL+S +LQ
Sbjct: 208 TTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRD---QILLRLLAS--------ALQIHR 256
Query: 298 YIDPCSPKGY-----LHHVESSPGSLAAKID------LSTLQAGGNFSECRSAALTLLQN 346
+ PC PKGY L V SP ++ + + +L N + CR L
Sbjct: 257 F-HPCWPKGYSTQVLLQEVYQSPCTMGQRPRAFNGSAIVSLSGTSNATLCRDLVSRLFN- 314
Query: 347 GKEKCSYKSCYLGSTFMPKLRGKFLATENFFHTSKFF----GLHQRAFLSHLLMAGEQFC 402
C + C F P + G F+A F++T F GL L L A E C
Sbjct: 315 -ISSCPFSQCSFNGVFQPPVAGNFIAFSAFYYTVDFLTTVMGL-PVGTLKQLEEATEITC 372
Query: 403 GEDWSKLKKKHQSLDDEDLLRYCFSSAYIVALLHDSLGISLDD---ERIGFANQVENIPL 459
+ W++L+ + L YC + +I LL S G D+ + F + + +
Sbjct: 373 NQTWTELQARVPG-QKTRLADYCAVAMFIHQLL--SRGYHFDERSFREVVFQKKAADTAV 429
Query: 460 DWALGAFI 467
WALG +
Sbjct: 430 GWALGYML 437
>pdb|3AAP|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
Pneumophila
pdb|3AAQ|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
Pneumophila In Complex With The Inhibitor Arl 67156
pdb|3AAR|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
Pneumophila In Complex With Amppnp
Length = 353
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 173/403 (42%), Gaps = 77/403 (19%)
Query: 83 LLDGGSTGTRIHVFSYDTE-TN---HFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLL-D 137
++D GSTG+R+H++SYDT+ TN H + ++ + ++ PG +S N L LL D
Sbjct: 7 VIDAGSTGSRLHIYSYDTDDTNTPIHIE-EIWNKKIKPGFASIQPNSVTIDAYLTMLLAD 65
Query: 138 FAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDW----AT 193
+P F+A TAG+RL+ Q K D FR W A
Sbjct: 66 APIHNIPVYFYA--------TAGMRLLPQSQQKKYYDELEY-----WFRQQSQWQLVEAK 112
Query: 194 VITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQ--EFSR-- 249
ITG+DE ++ W+ NY L TL +++ G++++GGASVQ+ F P+P+ E S+
Sbjct: 113 TITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVF----PMPKNAEISKHN 168
Query: 250 --TLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGY 307
L NLY HSFL GQ
Sbjct: 169 QVELNIYGQNINLYVHSFLGLGQTEMS--------------------------------- 195
Query: 308 LHHVESSPGSLAAKIDLSTLQAG-GNFSECRSAALTLLQNGKEKCSYKSCYLGSTFMPKL 366
H +SP A L ++G GN C+ +L+ N K + + L + P
Sbjct: 196 -HQFLNSPSCFANDYPLPDGESGQGNAPSCKEEVTSLM-NSVHKVNQQIQPLLA-LNPVN 252
Query: 367 RGKFLATENFFHTSKFFGLHQRAFLSH-LLMAGE-QFCGEDWSKLKKKHQSLDDEDLLRY 424
+ + +S+ F + LL G+ Q C + W L ++ DDE L +Y
Sbjct: 253 EWYSIGGISNLASSQLFHFENSELTNQSLLQQGDNQICHQQWDILNGQYP--DDEYLYQY 310
Query: 425 CFSSAYIVALLHDSLGISLDDERIGFANQVENIPLDWALGAFI 467
C S+Y AL+ D GI+ ++ I + +N LDW +G +
Sbjct: 311 CLLSSYYYALMVDGYGIN-PNQTIHYIPPEQN--LDWTIGVVL 350
>pdb|4A5B|A Chain A, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
GONDII Nucleoside Triphosphate Diphosphohydrolase 1
(Ntpdase1)
pdb|4A5B|B Chain B, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
GONDII Nucleoside Triphosphate Diphosphohydrolase 1
(Ntpdase1)
Length = 611
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 153 IRLMATAGLRLVDVVVQDKILDSCRRVLR----VSGFRFADD--WATVITGSDEGVYAWI 206
+ L +TAG+R +D + R ++ G++F + W ITG++EG++A+I
Sbjct: 159 VMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGLFAFI 218
Query: 207 VANYALGTLGGDPSET--------------TGIIELGGASVQVTFVSDEP--LPQ----- 245
N+ LG DP+ + G++E+GGAS Q+ F E LP
Sbjct: 219 TLNHLSRRLGEDPARSMIDEYGVKHSRNDLAGVVEVGGASAQIVFPLQEGTVLPSSVRAV 278
Query: 246 --EFSRTLKFGNVTYNLYSHSFLHFGQ-NVAFETLRELLSSGDFNTAAESLQKGTYIDPC 302
+ R L + ++ S SF+ G + A L+EL S+ +F LQ G +PC
Sbjct: 279 NLQRERLLPERYPSADVVSVSFMQLGMASSAGLFLKELCSNDEF------LQGGICSNPC 332
Query: 303 SPKGY 307
KG+
Sbjct: 333 LFKGF 337
>pdb|4A5A|A Chain A, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
GONDII Nucleoside Triphosphate Diphosphohydrolase 3
(Ntpdase3) In Complex With Magnesium And Amppnp
pdb|4A5A|B Chain B, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
GONDII Nucleoside Triphosphate Diphosphohydrolase 3
(Ntpdase3) In Complex With Magnesium And Amppnp
pdb|4A5A|C Chain C, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
GONDII Nucleoside Triphosphate Diphosphohydrolase 3
(Ntpdase3) In Complex With Magnesium And Amppnp
pdb|4A5A|D Chain D, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
GONDII Nucleoside Triphosphate Diphosphohydrolase 3
(Ntpdase3) In Complex With Magnesium And Amppnp
Length = 611
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 153 IRLMATAGLRLVDVVVQDKILDSCRRVLR----VSGFRFADD--WATVITGSDEGVYAWI 206
+ L +TAG+R +D + R ++ G++F + W ITG++EG++A+I
Sbjct: 159 VMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGLFAFI 218
Query: 207 VANYALGTLGGDPSET--------------TGIIELGGASVQVTFVSDEP--LPQ----- 245
N+ LG DP+ + G++E+GGAS Q+ F E LP
Sbjct: 219 TLNHLSRRLGEDPARSMIDEYGVKQSRNDLAGVVEVGGASAQIVFPLQEGTVLPSSVRAV 278
Query: 246 --EFSRTLKFGNVTYNLYSHSFLHFGQ-NVAFETLRELLSSGDFNTAAESLQKGTYIDPC 302
+ R L + ++ S SF+ G + A L+EL S+ +F LQ G +PC
Sbjct: 279 NLQRERLLPERYPSADVVSVSFMQLGMASSAGLFLKELCSNDEF------LQGGICSNPC 332
Query: 303 SPKGY 307
KG+
Sbjct: 333 LFKGF 337
>pdb|4A57|A Chain A, Crystal Structure Of Toxoplasma Gondii Nucleoside
Triphosphate Diphosphohydrolase 3 (Ntpdase3)
pdb|4A57|B Chain B, Crystal Structure Of Toxoplasma Gondii Nucleoside
Triphosphate Diphosphohydrolase 3 (Ntpdase3)
pdb|4A57|C Chain C, Crystal Structure Of Toxoplasma Gondii Nucleoside
Triphosphate Diphosphohydrolase 3 (Ntpdase3)
pdb|4A57|D Chain D, Crystal Structure Of Toxoplasma Gondii Nucleoside
Triphosphate Diphosphohydrolase 3 (Ntpdase3)
pdb|4A59|A Chain A, Crystal Structure Of Toxoplasma Gondii Nucleoside
Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex
With Amp
pdb|4A59|B Chain B, Crystal Structure Of Toxoplasma Gondii Nucleoside
Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex
With Amp
pdb|4A59|C Chain C, Crystal Structure Of Toxoplasma Gondii Nucleoside
Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex
With Amp
pdb|4A59|D Chain D, Crystal Structure Of Toxoplasma Gondii Nucleoside
Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex
With Amp
Length = 611
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 153 IRLMATAGLRLVDVVVQDKILDSCRRVLR----VSGFRFADD--WATVITGSDEGVYAWI 206
+ L +TAG+R +D + R ++ G++F + W ITG++EG++A+I
Sbjct: 159 VMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGLFAFI 218
Query: 207 VANYALGTLGGDPS--------------ETTGIIELGGASVQVTFVSDEP--LPQ----- 245
N+ LG DP+ + G++E+GGAS Q+ F E LP
Sbjct: 219 TLNHLSRRLGEDPARCMIDEYGVKQCRNDLAGVVEVGGASAQIVFPLQEGTVLPSSVRAV 278
Query: 246 --EFSRTLKFGNVTYNLYSHSFLHFGQ-NVAFETLRELLSSGDFNTAAESLQKGTYIDPC 302
+ R L + ++ S SF+ G + A L+EL S+ +F LQ G +PC
Sbjct: 279 NLQRERLLPERYPSADVVSVSFMQLGMASSAGLFLKELCSNDEF------LQGGICSNPC 332
Query: 303 SPKGY 307
KG+
Sbjct: 333 LFKGF 337
>pdb|3AGR|A Chain A, Crystal Structure Of Nucleoside Triphosphate Hydrolases
From Neospora Caninum
pdb|3AGR|B Chain B, Crystal Structure Of Nucleoside Triphosphate Hydrolases
From Neospora Caninum
Length = 602
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 36/152 (23%)
Query: 184 GFRF--ADDWATVITGSDEGVYAWIVANYALGTLGGDPS--------------ETTGIIE 227
G++F +W ITG++EG+YA++ N+ G LG DP+ + G++E
Sbjct: 194 GYKFFTNPEWTRPITGAEEGLYAFLALNHLSGRLGEDPARCYVDEYGMKQCRNDLVGVVE 253
Query: 228 LGGASVQVTFVSDE--PLPQ-------EFSRTLKFGNVTYNLYSHSFLHFGQNVAFET-- 276
+GGAS Q+ F + LP + R L + ++ S SF+ G VA +
Sbjct: 254 VGGASTQIVFPLQDGTALPSSIRAVNLQHERFLPSRFPSADVISVSFMQLG--VASSSGL 311
Query: 277 -LRELLSSGDFNTAAESLQKGTYIDPCSPKGY 307
+EL S+ +F +G +PC +G+
Sbjct: 312 FFKELCSNAEFR------HQGICYNPCIFRGF 337
>pdb|1UP4|A Chain A, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.85 Anstrom Resolution In The
Monoclinic Form
pdb|1UP4|B Chain B, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.85 Anstrom Resolution In The
Monoclinic Form
pdb|1UP4|C Chain C, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.85 Anstrom Resolution In The
Monoclinic Form
pdb|1UP4|D Chain D, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.85 Anstrom Resolution In The
Monoclinic Form
pdb|1UP4|E Chain E, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.85 Anstrom Resolution In The
Monoclinic Form
pdb|1UP4|F Chain F, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.85 Anstrom Resolution In The
Monoclinic Form
pdb|1UP4|G Chain G, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.85 Anstrom Resolution In The
Monoclinic Form
pdb|1UP4|H Chain H, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.85 Anstrom Resolution In The
Monoclinic Form
Length = 415
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 381 KFFGLHQRAFLSHLLMAGEQFCGEDWSKLKKKHQSLDDEDLLRYCFSSAYIVA 433
K++GL+ +F+ + + GE + + LK K ++ DED + + S ++
Sbjct: 186 KYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIV 238
>pdb|1UP6|A Chain A, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.55 Angstrom Resolution In The
Tetragonal Form With Manganese, Nad+ And
Glucose-6-Phosphate
pdb|1UP6|B Chain B, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.55 Angstrom Resolution In The
Tetragonal Form With Manganese, Nad+ And
Glucose-6-Phosphate
pdb|1UP6|C Chain C, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.55 Angstrom Resolution In The
Tetragonal Form With Manganese, Nad+ And
Glucose-6-Phosphate
pdb|1UP6|D Chain D, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.55 Angstrom Resolution In The
Tetragonal Form With Manganese, Nad+ And
Glucose-6-Phosphate
pdb|1UP6|E Chain E, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.55 Angstrom Resolution In The
Tetragonal Form With Manganese, Nad+ And
Glucose-6-Phosphate
pdb|1UP6|F Chain F, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.55 Angstrom Resolution In The
Tetragonal Form With Manganese, Nad+ And
Glucose-6-Phosphate
pdb|1UP6|G Chain G, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.55 Angstrom Resolution In The
Tetragonal Form With Manganese, Nad+ And
Glucose-6-Phosphate
pdb|1UP6|H Chain H, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.55 Angstrom Resolution In The
Tetragonal Form With Manganese, Nad+ And
Glucose-6-Phosphate
Length = 416
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 381 KFFGLHQRAFLSHLLMAGEQFCGEDWSKLKKKHQSLDDEDLLRYCFSSAYIVA 433
K++GL+ +F+ + + GE + + LK K ++ DED + + S ++
Sbjct: 187 KYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIV 239
>pdb|1UP7|A Chain A, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.4 Anstrom Resolution In The
Tetragonal Form With Nad And Glucose-6-Phosphate
pdb|1UP7|B Chain B, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.4 Anstrom Resolution In The
Tetragonal Form With Nad And Glucose-6-Phosphate
pdb|1UP7|C Chain C, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.4 Anstrom Resolution In The
Tetragonal Form With Nad And Glucose-6-Phosphate
pdb|1UP7|D Chain D, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.4 Anstrom Resolution In The
Tetragonal Form With Nad And Glucose-6-Phosphate
pdb|1UP7|E Chain E, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.4 Anstrom Resolution In The
Tetragonal Form With Nad And Glucose-6-Phosphate
pdb|1UP7|F Chain F, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.4 Anstrom Resolution In The
Tetragonal Form With Nad And Glucose-6-Phosphate
pdb|1UP7|G Chain G, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.4 Anstrom Resolution In The
Tetragonal Form With Nad And Glucose-6-Phosphate
pdb|1UP7|H Chain H, Structure Of The 6-Phospho-Beta Glucosidase From
Thermotoga Maritima At 2.4 Anstrom Resolution In The
Tetragonal Form With Nad And Glucose-6-Phosphate
Length = 417
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 381 KFFGLHQRAFLSHLLMAGEQFCGEDWSKLKKKHQSLDDEDLLRYCFSSAYIVA 433
K++GL+ +F+ + + GE + + LK K ++ DED + + S ++
Sbjct: 188 KYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIV 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,072,525
Number of Sequences: 62578
Number of extensions: 662692
Number of successful extensions: 1551
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1513
Number of HSP's gapped (non-prelim): 19
length of query: 536
length of database: 14,973,337
effective HSP length: 103
effective length of query: 433
effective length of database: 8,527,803
effective search space: 3692538699
effective search space used: 3692538699
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)