Query 009360
Match_columns 536
No_of_seqs 273 out of 955
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 03:26:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009360.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009360hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zx3_A Ectonucleoside triphosp 100.0 5E-101 2E-105 822.6 30.0 398 70-481 25-445 (452)
2 3cj1_A Ectonucleoside triphosp 100.0 1.7E-91 5.8E-96 752.9 26.2 391 74-483 29-452 (456)
3 3aap_A Ectonucleoside triphosp 100.0 2E-78 7E-83 633.2 24.7 338 78-469 2-352 (353)
4 4a57_A Nucleoside-triphosphata 100.0 3.7E-60 1.3E-64 504.6 17.9 385 76-473 37-588 (611)
5 1t6c_A Exopolyphosphatase; alp 99.8 4.3E-19 1.5E-23 182.5 12.5 144 78-240 12-157 (315)
6 3cer_A Possible exopolyphospha 99.8 1.4E-18 4.9E-23 180.6 14.3 153 73-240 10-165 (343)
7 3mdq_A Exopolyphosphatase; str 99.7 1.4E-17 4.8E-22 171.2 14.0 144 79-240 5-150 (315)
8 3hi0_A Putative exopolyphospha 99.7 3.3E-16 1.1E-20 170.7 12.6 156 78-255 15-172 (508)
9 1u6z_A Exopolyphosphatase; alp 99.6 3.6E-16 1.2E-20 170.6 12.3 142 81-240 13-156 (513)
10 3h1q_A Ethanolamine utilizatio 97.9 7.3E-05 2.5E-09 73.6 13.1 133 75-239 24-157 (272)
11 2ych_A Competence protein PILM 94.1 0.42 1.4E-05 48.8 12.7 57 80-139 14-72 (377)
12 3qfu_A 78 kDa glucose-regulate 94.0 0.84 2.9E-05 46.6 14.8 120 129-282 135-255 (394)
13 4a2a_A Cell division protein F 92.8 0.32 1.1E-05 51.2 9.3 78 78-160 7-86 (419)
14 4gni_A Putative heat shock pro 91.8 2.3 7.9E-05 43.8 14.3 123 129-283 132-255 (409)
15 3i33_A Heat shock-related 70 k 90.0 6.8 0.00023 40.0 15.9 122 129-282 140-263 (404)
16 2fxu_A Alpha-actin-1, actin, a 89.8 2.4 8.2E-05 43.4 12.1 87 130-240 80-167 (375)
17 4b9q_A Chaperone protein DNAK; 89.4 5.9 0.0002 43.4 15.6 124 129-282 117-241 (605)
18 2v7y_A Chaperone protein DNAK; 85.3 10 0.00035 40.4 14.2 123 125-282 86-210 (509)
19 3qb0_A Actin-related protein 4 82.8 12 0.00041 40.3 13.2 103 130-256 93-197 (498)
20 1hux_A Activator of (R)-2-hydr 71.8 11 0.00037 36.8 8.3 109 80-239 4-114 (270)
21 4ehu_A Activator of 2-hydroxyi 71.7 33 0.0011 32.9 11.8 141 79-282 1-141 (276)
22 3ezw_A Glycerol kinase; glycer 63.2 9 0.00031 41.1 6.1 61 77-141 2-65 (526)
23 4apw_A ALP12; actin-like prote 59.7 85 0.0029 31.2 12.4 47 220-281 171-217 (329)
24 2ks1_B Epidermal growth factor 58.0 12 0.00042 26.8 4.0 18 502-519 26-43 (44)
25 1yuw_A Heat shock cognate 71 k 54.2 1E+02 0.0035 33.1 12.6 121 129-282 121-242 (554)
26 1dkg_D Molecular chaperone DNA 53.4 96 0.0033 31.0 11.7 128 125-282 112-241 (383)
27 2l2t_A Receptor tyrosine-prote 52.8 17 0.00059 26.0 4.0 18 502-519 25-42 (44)
28 1jce_A ROD shape-determining p 48.9 70 0.0024 31.5 9.6 116 128-282 76-191 (344)
29 2jwa_A Receptor tyrosine-prote 48.5 20 0.0007 25.7 3.9 18 502-519 26-43 (44)
30 3l0q_A Xylulose kinase; xlylul 47.9 15 0.0005 39.7 4.6 60 78-141 4-66 (554)
31 3d2f_A Heat shock protein homo 46.6 2.9E+02 0.0097 30.5 14.9 122 129-282 120-246 (675)
32 1k8k_A ARP3, actin-like protei 45.5 53 0.0018 33.6 8.3 95 130-240 87-182 (418)
33 3ifr_A Carbohydrate kinase, FG 45.1 23 0.0008 37.7 5.6 60 78-141 6-68 (508)
34 3ll3_A Gluconate kinase; xylul 43.1 39 0.0013 35.9 7.0 62 78-143 3-67 (504)
35 2kho_A Heat shock protein 70; 41.3 94 0.0032 33.8 9.8 94 125-239 112-206 (605)
36 2p3r_A Glycerol kinase; glycer 40.1 44 0.0015 35.5 6.8 61 78-142 2-65 (510)
37 3h6e_A Carbohydrate kinase, FG 38.6 18 0.0006 38.6 3.4 59 78-140 5-65 (482)
38 3h3n_X Glycerol kinase; ATP-bi 37.4 40 0.0014 35.8 6.0 60 78-141 4-66 (506)
39 3i8b_A Xylulose kinase; strain 34.3 46 0.0016 35.5 5.8 56 78-139 4-59 (515)
40 3jvp_A Ribulokinase; PSI-II, N 34.1 42 0.0014 36.3 5.5 21 78-98 4-24 (572)
41 2fsj_A Hypothetical protein TA 33.8 35 0.0012 34.3 4.6 20 220-239 189-208 (346)
42 3g25_A Glycerol kinase; IDP007 32.8 57 0.002 34.5 6.2 60 79-142 6-68 (501)
43 4e1j_A Glycerol kinase; struct 32.4 51 0.0017 35.2 5.8 60 79-142 26-88 (520)
44 3dwl_A Actin-related protein 3 32.1 1.4E+02 0.0048 31.0 9.0 109 130-256 103-214 (427)
45 3hz6_A Xylulokinase; xylulose, 31.9 51 0.0017 35.0 5.7 59 78-140 4-65 (511)
46 4am6_A Actin-like protein ARP8 30.3 1.4E+02 0.0048 33.1 8.8 111 125-257 192-306 (655)
47 4fo0_A Actin-related protein 8 27.8 2.5E+02 0.0086 29.8 10.4 104 129-255 174-280 (593)
48 2w40_A Glycerol kinase, putati 27.8 73 0.0025 33.7 6.0 59 78-140 3-64 (503)
49 2dpn_A Glycerol kinase; thermu 27.6 93 0.0032 32.7 6.8 60 79-142 2-64 (495)
50 2yvc_D Neprilysin; protein-pep 27.5 23 0.00079 21.9 1.1 24 9-41 2-25 (26)
51 1zc6_A Probable N-acetylglucos 26.9 1.6E+02 0.0054 28.5 7.9 75 79-162 11-87 (305)
52 2uyt_A Rhamnulokinase; rhamnos 25.3 92 0.0031 32.6 6.2 62 78-141 3-69 (489)
53 2zf5_O Glycerol kinase; hypert 25.1 87 0.003 33.0 6.0 59 79-141 3-64 (497)
54 4bc3_A Xylulose kinase; transf 22.8 46 0.0016 35.6 3.3 21 77-97 8-28 (538)
55 2d4w_A Glycerol kinase; alpha 22.6 1.2E+02 0.0042 31.9 6.6 60 79-142 2-64 (504)
56 3zyy_X Iron-sulfur cluster bin 22.2 67 0.0023 35.5 4.4 27 76-102 203-229 (631)
57 2ch5_A NAGK protein; transfera 21.4 3.1E+02 0.01 26.7 8.9 90 79-179 6-97 (347)
No 1
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=100.00 E-value=4.9e-101 Score=822.56 Aligned_cols=398 Identities=28% Similarity=0.557 Sum_probs=344.1
Q ss_pred CCCCCCCCceEEEEEEcCCcceEEEEEEEeCCCC----ccccccceeecC-CCCcccCCCcchHHHHHHHHHHHHHHhCC
Q 009360 70 KPSFPPSSVKYGVLLDGGSTGTRIHVFSYDTETN----HFDFDLGSMRLN-PGLSSYAVNPTNAGDSLKDLLDFAKRKVP 144 (536)
Q Consensus 70 ~~~~~~~~~~y~iVIDaGSsgtRl~Vy~~~~~~~----~~~~~~~~~kv~-pGLss~~~~p~~a~~~l~~ll~~a~~~IP 144 (536)
|+.+.++..+|+|||||||||||||||+|+.++. .+. +...+|++ ||||+|+++|++++++|++|+++|++.||
T Consensus 25 ~~~~~~~~~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~-~~~~~k~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~~vp 103 (452)
T 3zx3_A 25 HNKPLPENVKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQ-QLEECQVKGPGISKYAQKTDEIAAYLAECMKMSTERIP 103 (452)
T ss_dssp -------CEEEEEEEEECSSCEEEEEEEEECCCTTCCCCCE-EEEEEECSSSCGGGGTTCGGGHHHHHHHHHHHHHHHSC
T ss_pred ccccCCCCceEEEEEEcCCCCcEEEEEEEeCCcCCCccccc-eeeeecccCCChhccCCCHHHHHHHHHHHHHHHHHhCC
Confidence 6778888999999999999999999999987431 221 45678995 99999999999999999999999999999
Q ss_pred CCCCCCceEEEEeechhcccCh---hhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCC
Q 009360 145 PAFWADTEIRLMATAGLRLVDV---VVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSE 221 (536)
Q Consensus 145 ~~~~~~Tpv~l~ATAGmRlL~~---~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~ 221 (536)
.++|+.|||+++||||||+|+. +++++||++|++.++++||.|.+ |+||||+|||+|+|+|+||++|+|..+..+
T Consensus 104 ~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~--v~iisG~eEg~y~wi~vnyllg~l~~~~~~ 181 (452)
T 3zx3_A 104 ASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQG--AKIITGQEEGAYGWITINYLLGRFKTPGGS 181 (452)
T ss_dssp HHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEE--EEECCHHHHHHHHHHHHHHHTTTTC---CC
T ss_pred HHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCc--eEECCchhhhhhhHHHHHhhhccccCCCCC
Confidence 9999999999999999999984 57899999999999999999975 999999999999999999999999865567
Q ss_pred ceEEEeeCCceeEEEeecCCC--CCccceeeEEecCeeEEEEEeecccccHHHHHHHHHHHhccCCccchhhccCCCccc
Q 009360 222 TTGIIELGGASVQVTFVSDEP--LPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYI 299 (536)
Q Consensus 222 t~G~lDlGGaStQItf~~~~~--~~~~~~~~~~l~g~~y~vYthSfLgyG~~~Ar~~~l~~l~~~~~~~~~~~~~~~~~~ 299 (536)
|+|+||||||||||+|.++++ ..+++..+++++|++|+||+|||||||+|+||+++++.+++. ..++.+.
T Consensus 182 t~g~lDlGGgStQi~f~~~~~~~~~~~~~~~l~l~g~~y~lYthSyLgyG~~~Ar~r~l~~l~~~--------~~~~~~~ 253 (452)
T 3zx3_A 182 TFGALDLGGASTQITFVPLNSTLEAPETSLQFRLYGTDYTVYTHSFLCYGKDQALWQKLAQDIQV--------SSGGILK 253 (452)
T ss_dssp CCEEEEECSSEEEEEECCSSCCSSSGGGEEEEEETTEEEEEEEEEEETCSHHHHHHHHHHHHCCT--------TSSSEEE
T ss_pred ceEEEecCCCceEEEeccCCCccCCCCceEEEEECCEEEEEEEEehhhccHHHHHHHHHHHHhcc--------cCCCccc
Confidence 999999999999999999875 356678899999999999999999999999999999999862 2345688
Q ss_pred CCCCCCCccceec-----cCCCccccc----ccceecccCCChHhHHHHHHHHhhcCCCCCCCCcccCCCcccCcccccc
Q 009360 300 DPCSPKGYLHHVE-----SSPGSLAAK----IDLSTLQAGGNFSECRSAALTLLQNGKEKCSYKSCYLGSTFMPKLRGKF 370 (536)
Q Consensus 300 ~PC~p~Gy~~~~~-----~~~~~~~~~----~~~~~~~GtGn~~~C~~~v~~ll~~~~~~C~~~~Csf~gv~qP~l~g~F 370 (536)
|||+|+||+.+++ .+||+...+ ...+++.|+|||++|++.++++|+. +.|.+++|+|||+|||+++|+|
T Consensus 254 ~PC~p~Gy~~~~~~~~~~~spc~~~~~~~~~~~~~~~~Gtg~~~~C~~~v~~ll~~--~~C~~~~CsfnGv~qP~~~~~F 331 (452)
T 3zx3_A 254 DPCFYPGYKKVVNVSELYGTPCTKRFEKKLPFNQFQVQGTGDYEQCHQSILKIFNN--SHCPYSQCAFNGVFLPPLQGSF 331 (452)
T ss_dssp ETTSCTTCEEEEEHHHHTTSGGGGGGCCCCSCSEEEEEECCCHHHHHHHHHTTSCC--SCCSSSSBSSTTCBCCCCCSCE
T ss_pred CCCCCCCCeeEEeecccccccccccccccCCCceeEEeccCCHHHHHHHHHHHhcc--CcCCCCCcccCccccCCCCCce
Confidence 9999999999876 578886432 2348899999999999999999985 7999999999999999999999
Q ss_pred ccccceeeeecccCC--cccc-cHHHHHHHHhcccccchHHHHhhCCCCChhhHHhhhhhhHHHHHHhhhccCCCCC-Cc
Q 009360 371 LATENFFHTSKFFGL--HQRA-FLSHLLMAGEQFCGEDWSKLKKKHQSLDDEDLLRYCFSSAYIVALLHDSLGISLD-DE 446 (536)
Q Consensus 371 ~A~S~fy~t~~fl~l--~~~~-~l~~~~~aa~~~C~~~w~~l~~~~~~~~~~~l~~~Cf~~~Yi~~LL~dGygf~~d-~~ 446 (536)
||+|+|||+++|||+ .+.. ++++|.++++++|+++|+++++.+|+.+++++++|||+++||++|||+||||+.+ ++
T Consensus 332 ~a~S~fy~~~~~l~li~~~~~~~l~~~~~~a~~~C~~~w~~~~~~~p~~~~~~l~~~Cf~~~yi~~LL~~Gyg~~~~~~~ 411 (452)
T 3zx3_A 332 GAFSAFYFVMDFFKKMANDSVSSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEYCFSGTYILSLLLQGYNFTGTSWD 411 (452)
T ss_dssp EEEEHHHHHHHHHHHHC----CCHHHHHHHHHHHHTSCHHHHHHHSTTSCHHHHTTHHHHHHHHHHHHHTTSCCCGGGGG
T ss_pred EEEEEeeeehhhhCCCCCCCccCHHHHHHHHHHHhcCcHHHHHhhCCCcchhHHHHHhhHHHHHHHHHhcccCCCCCccc
Confidence 999999999999999 6655 9999999999999999999999999999999999999999999999999999975 58
Q ss_pred ceeecccccccccccchhHHHHHhcccccccCCCc
Q 009360 447 RIGFANQVENIPLDWALGAFILQSTAVLDELHPSW 481 (536)
Q Consensus 447 ~I~f~~ki~~~ev~WtLGa~ll~~~~~~~~~~~~~ 481 (536)
+|+|++||+++|++|||| +|++++||||+|.|..
T Consensus 412 ~I~~~kkI~~~e~~WtLG-a~L~ltn~ip~e~~~~ 445 (452)
T 3zx3_A 412 QIHFMGKIKDSNAGWTLG-YMLNLTNMIPAEQPLS 445 (452)
T ss_dssp GEEECSEETTEECSSHHH-HHHHHTTC--------
T ss_pred ceeeeeeeCCcccchhHH-HHHHHhccCCCCCCCC
Confidence 999999999999999999 5889999999998865
No 2
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=100.00 E-value=1.7e-91 Score=752.91 Aligned_cols=391 Identities=29% Similarity=0.525 Sum_probs=345.3
Q ss_pred CCCCceEEEEEEcCCcceEEEEEEEeCCC--C--ccccccceeec-CCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCC
Q 009360 74 PPSSVKYGVLLDGGSTGTRIHVFSYDTET--N--HFDFDLGSMRL-NPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFW 148 (536)
Q Consensus 74 ~~~~~~y~iVIDaGSsgtRl~Vy~~~~~~--~--~~~~~~~~~kv-~pGLss~~~~p~~a~~~l~~ll~~a~~~IP~~~~ 148 (536)
.|+..+|++|||||||||||+||+|+.++ + .+. +...+++ +|||++|+.+|+++.++|.+|+++|++.||.+.|
T Consensus 29 ~~~~~~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~-~~~~~~~~~~Gls~~~~~pe~~~~~l~~Ll~~a~~~iP~~~~ 107 (456)
T 3cj1_A 29 EPPALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVG-QHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRH 107 (456)
T ss_dssp --CCEEEEEEEEECSSCEEEEEEEEETTSTTSTTCCE-EEEEEECSSSCGGGGTTSTHHHHHHTHHHHHHHHHHSCHHHH
T ss_pred CCCCceEEEEEEcCCCCeEEEEEEEcCCCCCCcccee-eeeeeeecccccccccCCHHHHHHHHHHHHHHHHHhCCHHHc
Confidence 66788999999999999999999998642 1 121 3456788 8999999999999999999999999999999999
Q ss_pred CCceEEEEeechhcccCh---hhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCC--------
Q 009360 149 ADTEIRLMATAGLRLVDV---VVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGG-------- 217 (536)
Q Consensus 149 ~~Tpv~l~ATAGmRlL~~---~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~-------- 217 (536)
+.|||+++||||||+|+. +++++||++|++.++++||.|. +++||||+|||+|+|+|+||++|++.+
T Consensus 108 ~~t~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~--~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~ 185 (456)
T 3cj1_A 108 ASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFR--GARILSGQDEGVFGWVTANYLLENFIKYGWVGRWI 185 (456)
T ss_dssp TTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEE--EEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEEC
T ss_pred CCceEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcC--ceEEcCchHHhhhhHHHHHhhhccccccccccccc
Confidence 999999999999999973 5899999999999988898765 499999999999999999999998732
Q ss_pred -CCCCceEEEeeCCceeEEEeecCCCC-CccceeeEEecCeeEEEEEeecccccHHHHHHHHHHHhccCCccchhhccCC
Q 009360 218 -DPSETTGIIELGGASVQVTFVSDEPL-PQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQK 295 (536)
Q Consensus 218 -~~~~t~G~lDlGGaStQItf~~~~~~-~~~~~~~~~l~g~~y~vYthSfLgyG~~~Ar~~~l~~l~~~~~~~~~~~~~~ 295 (536)
...+++|+||||||||||+|.+++.. .+++..+++++|++|+||+|||||||+|+||+++++.+++
T Consensus 186 ~~~~~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g~~y~lY~hS~LgyG~~~Ar~~~l~~l~~------------ 253 (456)
T 3cj1_A 186 RPRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQ------------ 253 (456)
T ss_dssp SSCCCCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETTEEEEEEEEEEETCSHHHHHHHHHHHHHH------------
T ss_pred ccCCCceEEEEcCCCceEEEeccCCccCCCCceEEEEeCCeeEEEEEEecccchHHHHHHHHHHHHhc------------
Confidence 12568999999999999999987753 5677899999999999999999999999999999998873
Q ss_pred CcccCCCCCCCccceec-----cCCCccccc------ccceecccCCChHhHHHHHHHHhhcCCCCCCCCcccCCCcccC
Q 009360 296 GTYIDPCSPKGYLHHVE-----SSPGSLAAK------IDLSTLQAGGNFSECRSAALTLLQNGKEKCSYKSCYLGSTFMP 364 (536)
Q Consensus 296 ~~~~~PC~p~Gy~~~~~-----~~~~~~~~~------~~~~~~~GtGn~~~C~~~v~~ll~~~~~~C~~~~Csf~gv~qP 364 (536)
..+.|||+|+||+.+++ .+||+.... ...+++.|+|||++|++.++++|+. +.|.+++|+|||+|||
T Consensus 254 ~~~~~PC~p~G~~~~~~~~~~~~~~c~~~~~~~~y~~~~~~~~~Gtg~~~~C~~~v~~ll~~--~~C~~~~Csf~gv~~P 331 (456)
T 3cj1_A 254 IHRFHPCWPKGYSTQVLLQEVYQSPCTMGQRPRAFNGSAIVSLSGTSNATLCRDLVSRLFNI--SSCPFSQCSFNGVFQP 331 (456)
T ss_dssp HTSSEEEEEETCEEEEEHHHHHSSTTTTTC-------CCEEEEEECCCHHHHHHHHHTTCCC--SCCSSSSBSSTTCBCC
T ss_pred ccCCCCCcCCCCeeeeeecccccCcccccccccccCCCceeEeecCCCHHHHHHHHHHHhcc--CcCCCcccccCCccCC
Confidence 24789999999999876 467875322 1247889999999999999999985 5799999999999999
Q ss_pred ccccccccccceeeeecccCCccccc---HHHHHHHHhcccccchHHHHhhCCCCChhhHHhhhhhhHHHHHHhhhccCC
Q 009360 365 KLRGKFLATENFFHTSKFFGLHQRAF---LSHLLMAGEQFCGEDWSKLKKKHQSLDDEDLLRYCFSSAYIVALLHDSLGI 441 (536)
Q Consensus 365 ~l~g~F~A~S~fy~t~~fl~l~~~~~---l~~~~~aa~~~C~~~w~~l~~~~~~~~~~~l~~~Cf~~~Yi~~LL~dGygf 441 (536)
+++|+|||+|+|||+++||||.+..+ +++|.++++++|+++|+++++.+| .++++++++||+++||++|||+||||
T Consensus 332 ~~~~~f~a~S~fy~~~~~lgl~~~~~~~~~~~~~~aa~~~C~~~w~~~~~~~p-~~~~~l~~~Cf~~~yi~~LL~~G~g~ 410 (456)
T 3cj1_A 332 PVAGNFIAFSAFYYTVDFLTTVMGLPVGTLKQLEEATEITCNQTWTELQARVP-GQKTRLADYCAVAMFIHQLLSRGYHF 410 (456)
T ss_dssp CCCSCEEEEHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHCCHHHHHTTCC-SCCTTGGGHHHHHHHHHHHHHTTSCC
T ss_pred CCCCcEEEEEehHhhHHHhCCCCCCCccCHHHHHHHHHHHhcCcHHHHhhhCC-cchhhHHHHhhHHHHHHHHHhcccCC
Confidence 99999999999999999999988665 999999999999999999999998 77788999999999999999999999
Q ss_pred CCC-CcceeecccccccccccchhHHHHHhcccccccCCCccc
Q 009360 442 SLD-DERIGFANQVENIPLDWALGAFILQSTAVLDELHPSWIS 483 (536)
Q Consensus 442 ~~d-~~~I~f~~ki~~~ev~WtLGa~ll~~~~~~~~~~~~~~~ 483 (536)
+.+ +++|+|++||+++|++||||| |+++++++|+|.|...+
T Consensus 411 ~~~~~~~i~~~~kI~~~e~~WtLGa-~l~~~~~~p~~~~~~~~ 452 (456)
T 3cj1_A 411 DERSFREVVFQKKAADTAVGWALGY-MLNLTNLIPADLPGLRK 452 (456)
T ss_dssp CHHHHTTEEECSEETTEECSSHHHH-HHHHTTCSCSSCGGGGG
T ss_pred CCCcccceEeeeeeCCeeccchHHH-HHHHhccCCccCCcccC
Confidence 964 579999999999999999996 55788889888875533
No 3
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=100.00 E-value=2e-78 Score=633.20 Aligned_cols=338 Identities=27% Similarity=0.476 Sum_probs=294.0
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCC-C-cccc-ccceeecCCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCCCCceEE
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTET-N-HFDF-DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIR 154 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~-~-~~~~-~~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~~~IP~~~~~~Tpv~ 154 (536)
.+|.+|||+||||+||+||+|+.+. . .+.. +....|+.|||++|.++|+++.+.|. +++. .+.++.|||+
T Consensus 2 ~~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~~~~~~~~l~---~f~~----~~~~~~~~v~ 74 (353)
T 3aap_A 2 HSCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLT---MLLA----DAPIHNIPVY 74 (353)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCSHHHHHHHHH---HHHT----TCSCCSEEEE
T ss_pred CCEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCCHHHHHHHHH---HHHH----HHhcCCCcEE
Confidence 3678999999999999999998532 1 1211 11127889999999999998888877 4444 5778999999
Q ss_pred EEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeCCceeE
Q 009360 155 LMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQ 234 (536)
Q Consensus 155 l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQ 234 (536)
++||||||+++.+++++||++|++.+++++| |++.+++||||+|||.|+|+|+||++++|..+..+|++++||||||||
T Consensus 75 ~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~-~~g~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGSte 153 (353)
T 3aap_A 75 FYATAGMRLLPQSQQKKYYDELEYWFRQQSQ-WQLVEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQ 153 (353)
T ss_dssp EEECHHHHTSCHHHHHHHHHHHHHHHHTCSS-EEEEEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEE
T ss_pred EEecHHHhcCcHHHHHHHHHHHHHHHhhCCC-CCCCeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceE
Confidence 9999999999877799999999999999999 888899999999999999999999999887555568999999999999
Q ss_pred EEeecCC--CCCccceeeEEecCeeEEEEEeecccccHHHHHHHHHHHhccCCccchhhccCCCcccCCCCCCCccceec
Q 009360 235 VTFVSDE--PLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVE 312 (536)
Q Consensus 235 Itf~~~~--~~~~~~~~~~~l~g~~y~vYthSfLgyG~~~Ar~~~l~~l~~~~~~~~~~~~~~~~~~~PC~p~Gy~~~~~ 312 (536)
|+|..++ ...+.+..++++|+++|+||+|||||||+|+||+++++ .|||+|+||+. ..
T Consensus 154 i~~~~~~~~~~~~~~~~sl~lG~~~~~ly~~S~Lg~G~~~ar~~~~~-------------------~~PC~~~G~~~-~~ 213 (353)
T 3aap_A 154 IVFPMPKNAEISKHNQVELNIYGQNINLYVHSFLGLGQTEMSHQFLN-------------------SPSCFANDYPL-PD 213 (353)
T ss_dssp EEEECCCCTTSCGGGEEEEEETTEEEEEEEEEEETCSHHHHHTTTTT-------------------CGGGSCBTCBC-TT
T ss_pred EEEecCCccccCCCceEEEEECCcceeeeeecchhccHHHHHHHHhc-------------------CCCCCCCCCCc-cc
Confidence 9998553 22233458899999999999999999999999998753 48999999982 11
Q ss_pred cCCCcccccccceecccCCChHhHHHHHHHHhhcCCCCCCCCcccCCCcccCcc----ccccccccceeeee--cccCCc
Q 009360 313 SSPGSLAAKIDLSTLQAGGNFSECRSAALTLLQNGKEKCSYKSCYLGSTFMPKL----RGKFLATENFFHTS--KFFGLH 386 (536)
Q Consensus 313 ~~~~~~~~~~~~~~~~GtGn~~~C~~~v~~ll~~~~~~C~~~~Csf~gv~qP~l----~g~F~A~S~fy~t~--~fl~l~ 386 (536)
. +.|+|||++|++.++++|+ ++|+|||++||++ +++|||+|+|||++ +|||++
T Consensus 214 ---------g----~~g~g~~~~C~~~~~~ll~--------~~c~f~gv~~p~~~~~~~~~f~~~S~f~~~~~~~~~~l~ 272 (353)
T 3aap_A 214 ---------G----ESGQGNAPSCKEEVTSLMN--------SVHKVNQQIQPLLALNPVNEWYSIGGISNLASSQLFHFE 272 (353)
T ss_dssp ---------S----CBCCCCHHHHHHHHHHHHH--------HTSCHHHHHHHHHHHSCCSEEEEEETHHHHHTSTTCCCC
T ss_pred ---------C----ccCCCCHHHHHHHHHHHhc--------CccccCcccCCccccCCCCcEEEEEEEEeeechhhcCCC
Confidence 1 5699999999999999997 4699999999997 68999999999998 999998
Q ss_pred -ccccHHHHHHHHhc-ccccchHHHHhhCCCCChhhHHhhhhhhHHHHHHhhhccCCCCCCcceeecccccccccccchh
Q 009360 387 -QRAFLSHLLMAGEQ-FCGEDWSKLKKKHQSLDDEDLLRYCFSSAYIVALLHDSLGISLDDERIGFANQVENIPLDWALG 464 (536)
Q Consensus 387 -~~~~l~~~~~aa~~-~C~~~w~~l~~~~~~~~~~~l~~~Cf~~~Yi~~LL~dGygf~~d~~~I~f~~ki~~~ev~WtLG 464 (536)
+.+++++|.+++++ +|+++|+++++.+|+ ++++.++||+++||++|||+||||+ ++++|++++ +++|++||||
T Consensus 273 ~~~~~~~~~~~~a~~~~C~~~w~~~~~~~~~--~~~~~~~C~~~~yi~~lL~~G~g~~-~~~~i~~~~--~~~e~~W~LG 347 (353)
T 3aap_A 273 NSELTNQSLLQQGDNQICHQQWDILNGQYPD--DEYLYQYCLLSSYYYALMVDGYGIN-PNQTIHYIP--PEQNLDWTIG 347 (353)
T ss_dssp TTEEEHHHHHHHHHHHTTTSBHHHHHHHSTT--CTTGGGHHHHHHHHHHHHTTTTCCC-TTSEEEECC--GGGCCCTHHH
T ss_pred CCccCHHHHHHHHHhhhhCCcHHHHhhhcCc--chhHHHHhhhHHHHHHHHHhhcCCC-CCceEEecC--CCCCccchhh
Confidence 78999999999999 999999999999884 5578899999999999999999998 578999999 9999999999
Q ss_pred HHHHH
Q 009360 465 AFILQ 469 (536)
Q Consensus 465 a~ll~ 469 (536)
|+|..
T Consensus 348 a~l~~ 352 (353)
T 3aap_A 348 VVLHR 352 (353)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 87764
No 4
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=100.00 E-value=3.7e-60 Score=504.60 Aligned_cols=385 Identities=24% Similarity=0.327 Sum_probs=274.0
Q ss_pred CCceEEEEEEcCCcceEEEEEEEeC----CCC-ccccccceeecCCC-------------CcccCC--------------
Q 009360 76 SSVKYGVLLDGGSTGTRIHVFSYDT----ETN-HFDFDLGSMRLNPG-------------LSSYAV-------------- 123 (536)
Q Consensus 76 ~~~~y~iVIDaGSsgtRl~Vy~~~~----~~~-~~~~~~~~~kv~pG-------------Lss~~~-------------- 123 (536)
...++.||||+|||+||..||.... .+. .+. .....-+.+| |+.|+.
T Consensus 37 ~~~qa~v~id~gss~t~~~~f~~~t~~~p~~~r~vl-p~~~~~~~~g~~~~~~r~~le~wld~~a~~~wesr~~~s~~~~ 115 (611)
T 4a57_A 37 DSLQALVVIDAGSSSTRTNVFLAKTRSCPNKGRSID-PDSIQLIGAGKRFAGLRVVLEEWLDTYAGKDWESRPVDARLLF 115 (611)
T ss_dssp EEEEEEEEEEECSSCEEEEEEEEEEEEETTTEEEEC-GGGCEEEEECCCBCCHHHHHHHHHHHHTCTTTTTSCCCGGGGG
T ss_pred ccceEEEEEeCCCCCcceeeEEEeecCCCCcceeeC-cchhhhhhCCcccccHHHHHHHHHHHhcCCCcccCccchHHHH
Confidence 3568999999999999999998764 111 010 1111112222 555554
Q ss_pred -----------Ccch-HHHHHHHHHHHHHHhCCCCCCCC--ceEEEEeechhcccChhhHHHHHHHHHHhhccc------
Q 009360 124 -----------NPTN-AGDSLKDLLDFAKRKVPPAFWAD--TEIRLMATAGLRLVDVVVQDKILDSCRRVLRVS------ 183 (536)
Q Consensus 124 -----------~p~~-a~~~l~~ll~~a~~~IP~~~~~~--Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~------ 183 (536)
++-. .++.|.+||++|++.||+++|++ |||||+||||||+||.+++++||++|++.++++
T Consensus 116 ~~~p~m~~~a~~~~~~l~~~I~pLLd~A~~~VPk~~~k~~~TPV~L~ATAGMRLLp~~kqd~IL~aVr~~L~~sp~~~gF 195 (611)
T 4a57_A 116 QYVPQMHEGAKKLMQLLEEDTVAILDSQLNEKQKVQVKALGIPVMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGY 195 (611)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEEEECTTSTTCCTTHHHHHHHHHHHHHTSCCGGGCC
T ss_pred hhChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHcccCCCcEEEEeeeecccCCHHHHHHHHHHHHHHHhcCCcccCc
Confidence 2221 35789999999999999999999 999999999999999999999999999999975
Q ss_pred CccccCCceEEcCCcccchhHHHHHHHhhccCCCC--------------CCCceEEEeeCCceeEEEeecCCCC-Cccce
Q 009360 184 GFRFADDWATVITGSDEGVYAWIVANYALGTLGGD--------------PSETTGIIELGGASVQVTFVSDEPL-PQEFS 248 (536)
Q Consensus 184 ~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~--------------~~~t~G~lDlGGaStQItf~~~~~~-~~~~~ 248 (536)
+|.+.++||+||||+|||+|+|||+||++|+|+.+ ..+|+|+||||||||||+|+++++. .+++.
T Consensus 196 ~F~~~~~~vrIIsG~EEGvYgWITvNYLLG~f~~~~~~~~~~~~~~~~~~~~TvG~LDLGGASTQIaF~p~~~~~~P~~~ 275 (611)
T 4a57_A 196 KFFTNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMIDEYGVKQCRNDLAGVVEVGGASAQIVFPLQEGTVLPSSV 275 (611)
T ss_dssp CEECCTTTSEECCHHHHHHHHHHHHHHHTTCCSSSCSEEEECTTSCEEEECCCCEEEEECSSCEEEEEECCTTCCCCTTS
T ss_pred ccccCCCceeecCCccceeeEeeehhhhhccccccccccccccccccCCCCceeEEEeeCCceEEEEeccCcccCCCCcc
Confidence 35557889999999999999999999999999642 2579999999999999999987643 45778
Q ss_pred eeEEecCee--------EEEEEeecccccHHHHHHHHHHHhccCCccchhhccCCCcccCCCCCCCccceeccC------
Q 009360 249 RTLKFGNVT--------YNLYSHSFLHFGQNVAFETLRELLSSGDFNTAAESLQKGTYIDPCSPKGYLHHVESS------ 314 (536)
Q Consensus 249 ~~~~l~g~~--------y~vYthSfLgyG~~~Ar~~~l~~l~~~~~~~~~~~~~~~~~~~PC~p~Gy~~~~~~~------ 314 (536)
..++|++.+ |+||+|||||||+|+||+++++.+.+.. +...+..+.|||+|+||+.+++..
T Consensus 276 ~~~~L~g~~~l~~~~~~Y~VYTHSfLGYGlnqAR~r~Lk~L~~~~-----~~~~~~~i~dPCLPkGY~~~~~~~g~ty~i 350 (611)
T 4a57_A 276 RAVNLQRERLLPERYPSADVVSVSFMQLGMASSAGLFLKELCSND-----EFLQGGICSNPCLFKGFQQSCSAGEVEVRP 350 (611)
T ss_dssp CCEETTTTTSSCTTSCCCEEEEEEEGGGSHHHHHHHHHHHHTTST-----TTEETTEEEETTSCBTCEEESSSBCEEECT
T ss_pred eEEEEcCcccccCCccceEEEEEechhhhHHHHHHHHHHHHhhcc-----ccCCCCcccCCCcCCCCceEEEECCEEEEe
Confidence 889999876 9999999999999999999999998631 111245688999999999987611
Q ss_pred --------------------CCccc-c----c-----------------------ccc-eecccCCChHhHHHHHHHHhh
Q 009360 315 --------------------PGSLA-A----K-----------------------IDL-STLQAGGNFSECRSAALTLLQ 345 (536)
Q Consensus 315 --------------------~~~~~-~----~-----------------------~~~-~~~~GtGn~~~C~~~v~~ll~ 345 (536)
.|... + | -+. ..+.|||||+.|.+.|..+|-
T Consensus 351 ~G~~~vd~~l~~N~L~P~at~C~~~n~~i~~k~~n~~~c~~~~i~p~~~l~~r~~i~~c~~ivgtgdf~~c~~~v~~il~ 430 (611)
T 4a57_A 351 DGSASVNEDVRKNRLKPLATYCSVNNPEISFKVTNEMQCRENSIDPTKPLAERMKIENCSIIKGTGNFDKCVSQVESILV 430 (611)
T ss_dssp TSCEEECCCGGGBTTHHHHHHSSTTCHHHHTSTTHHHHHHTTTCCTTSCHHHHHCCTTCCEEEECCCHHHHHHHHHHHTT
T ss_pred CCccccchhHhhccccchhhhhcccCHHHHhhhhhhhhhhhcCcCCCcCHHHHcCCCCceEEeecCCHHHHHHHHHHHhc
Confidence 11100 0 0 001 457899999999999999987
Q ss_pred cCCCCCCC----CcccCCCcccCccccccccccc-eeeeec----------ccCCc-cc--ccHHHHHHHHhcccccchH
Q 009360 346 NGKEKCSY----KSCYLGSTFMPKLRGKFLATEN-FFHTSK----------FFGLH-QR--AFLSHLLMAGEQFCGEDWS 407 (536)
Q Consensus 346 ~~~~~C~~----~~Csf~gv~qP~l~g~F~A~S~-fy~t~~----------fl~l~-~~--~~l~~~~~aa~~~C~~~w~ 407 (536)
..+-+-+. ..-.|...-|- -+|...+. .+.|.- -.|+- .+ -+..++.+|+++||+.+..
T Consensus 431 ~p~~plpan~ea~s~gf~~~~qv---f~~~s~~ap~~vtg~~~~~~i~~l~~~~~l~~~f~g~~~~l~~aa~~fc~~p~~ 507 (611)
T 4a57_A 431 APKLPLPANIEAASSGFESVDQV---FRFASSTAPMIVTGGGMLAAINTLKDHRLLRSDFSGDVEELAEAAREFCSSEVI 507 (611)
T ss_dssp SCSSCCCCCCCTTCCCCCCHHHH---HHHSCCCSCEEEECHHHHHHHHHHHHTTSSCTTCCCCHHHHHHHHHHHHTCEEE
T ss_pred CCCCCCCccchhhccCCCCHHHH---HhhhccCCCeEEechhHhhHHHHHHHcCCCcccCCCcHHHHHHHHHHhhcCcce
Confidence 43221111 11122221110 13333332 222221 11332 22 3577999999999998762
Q ss_pred HHHhh-----CCCC-Ch----hhHHhhhhhhHHHHHHhhh---ccCCCCCCcceeecccccc------cccccchhHHHH
Q 009360 408 KLKKK-----HQSL-DD----EDLLRYCFSSAYIVALLHD---SLGISLDDERIGFANQVEN------IPLDWALGAFIL 468 (536)
Q Consensus 408 ~l~~~-----~~~~-~~----~~l~~~Cf~~~Yi~~LL~d---Gygf~~d~~~I~f~~ki~~------~ev~WtLGa~ll 468 (536)
.+.. .|+. .+ ..-.+.|-..+.-++||.+ |..-| ..|.|.++|.| -+++|.+|+++.
T Consensus 508 -~~~~g~~~~~~~~~~~~~l~~~~~~~c~~la~~~~ll~~~~~g~~~p---~~i~~~~~v~~~~g~~~~~~gw~~g~il~ 583 (611)
T 4a57_A 508 -IRTDGPVIQLPNARGEQKLNSLNFDLCKTMALTVSLLRHMAAGENQP---SFIKWEKSIAGPDGKPLADLGWQVGVILH 583 (611)
T ss_dssp -EETTEEEEECSTTCCEEECCTTTTTHHHHHHHHHHHHHHHHHSSSCC---SCEEECSCCCBTTBSCSSCSSSHHHHHHH
T ss_pred -ecCCceeEEccccccceecccccHHHHHHHHHHHHHHHHHhccccCC---ceEEeeeeccCCCCCCccccCchHHHHHH
Confidence 2111 2322 11 1123569999999999875 55555 35999999987 458999999888
Q ss_pred Hhccc
Q 009360 469 QSTAV 473 (536)
Q Consensus 469 ~~~~~ 473 (536)
+.-+.
T Consensus 584 ~~~~~ 588 (611)
T 4a57_A 584 HVLFT 588 (611)
T ss_dssp HHTSH
T ss_pred HHHhH
Confidence 87764
No 5
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=99.78 E-value=4.3e-19 Score=182.51 Aligned_cols=144 Identities=19% Similarity=0.300 Sum_probs=107.8
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCc-cccccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCCCceEEE
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNH-FDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRL 155 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~-~~~~~~~~kv~pGLss~~~-~p~~a~~~l~~ll~~a~~~IP~~~~~~Tpv~l 155 (536)
.+| ++||+|||++|+.||++..+... ++......++..|+..... +++.+.+.+..|-++++.. +.++.+.+++
T Consensus 12 m~~-a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~---~~~~v~~i~~ 87 (315)
T 1t6c_A 12 MRV-ASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLI---DEFKVERVKA 87 (315)
T ss_dssp EEE-EEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---HHTTCSEEEE
T ss_pred cEE-EEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHH---HHCCCCeEEE
Confidence 455 58999999999999999743211 1111122345566654333 4555566666666665544 4567789999
Q ss_pred EeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeCCceeEE
Q 009360 156 MATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQV 235 (536)
Q Consensus 156 ~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQI 235 (536)
+||++||.+ .|++++++.|++.+ |+. ++||||+|||.|+|+|+.+.++ ..++..++|+|||||||
T Consensus 88 vATsA~R~A--~N~~~fl~~v~~~~---G~~-----i~vIsg~eEA~l~~~gv~~~l~-----~~~~~lvvDIGGGStEl 152 (315)
T 1t6c_A 88 VATEAIRRA--KNAEEFLERVKREV---GLV-----VEVITPEQEGRYAYLAVAYSLK-----PEGEVCVVDQGGGSTEY 152 (315)
T ss_dssp EECHHHHTS--TTHHHHHHHHHHHT---CCC-----EEECCHHHHHHHHHHHHHHHTC-----CCSEEEEEEEETTEEEE
T ss_pred EEcHHHHcC--cCHHHHHHHHHHHH---CCC-----EEEcCHHHHHHHHHHHHHhhcc-----cCCCEEEEEeCCCcEEE
Confidence 999999985 69999999999754 885 9999999999999999999875 23468899999999999
Q ss_pred EeecC
Q 009360 236 TFVSD 240 (536)
Q Consensus 236 tf~~~ 240 (536)
++..+
T Consensus 153 ~~~~~ 157 (315)
T 1t6c_A 153 VFGKG 157 (315)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 99753
No 6
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=99.77 E-value=1.4e-18 Score=180.59 Aligned_cols=153 Identities=20% Similarity=0.238 Sum_probs=111.4
Q ss_pred CCCCCceEEEEEEcCCcceEEEEEEEeCCC-C-ccccccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCC
Q 009360 73 FPPSSVKYGVLLDGGSTGTRIHVFSYDTET-N-HFDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWA 149 (536)
Q Consensus 73 ~~~~~~~y~iVIDaGSsgtRl~Vy~~~~~~-~-~~~~~~~~~kv~pGLss~~~-~p~~a~~~l~~ll~~a~~~IP~~~~~ 149 (536)
..+++.+...|||+|||++||.||++..+. . .++......+++.|+..... +|+.+.+.+..|-++++.. +.++
T Consensus 10 ~~~~~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~---~~~~ 86 (343)
T 3cer_A 10 HMSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI---AEHP 86 (343)
T ss_dssp ----CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---TTSC
T ss_pred ccCCCCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH---HHCC
Confidence 344444455699999999999999997422 1 11111123355667655433 4555666666666666554 5677
Q ss_pred CceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeC
Q 009360 150 DTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELG 229 (536)
Q Consensus 150 ~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlG 229 (536)
.+.++++||++||.+ .|++++++.|++.+ |+. ++||||+|||.|+|+|+.+.++.. .......++|||
T Consensus 87 v~~v~~vATsA~R~A--~N~~~fl~~v~~~t---Gi~-----ieVIsG~eEA~l~~~gv~~~~~~~--~~~~~~lviDIG 154 (343)
T 3cer_A 87 IDGLRFVATSATRDA--ENREEFEDEIERIL---GVR-----PEVIPGTEEADLSFLGATSVVNRD--DLPAPYLVVDLG 154 (343)
T ss_dssp CSEEEEEECHHHHHC--TTHHHHHHHHHHHH---SSC-----CEECCHHHHHHHHHHHHHSSCCTT--TCCSSEEEEEEC
T ss_pred CCeEEEEecHHHHcC--cCHHHHHHHHHHHH---CCC-----EEEeCHHHHHHHHHHHHHhhCccc--cccCCEEEEEeC
Confidence 889999999999995 69999999999865 785 999999999999999999877531 123457899999
Q ss_pred CceeEEEeecC
Q 009360 230 GASVQVTFVSD 240 (536)
Q Consensus 230 GaStQItf~~~ 240 (536)
|||||+++..+
T Consensus 155 GGStel~~~~~ 165 (343)
T 3cer_A 155 GGSTELVIGGD 165 (343)
T ss_dssp SSCEEEEECCC
T ss_pred CCceEEEEeec
Confidence 99999999865
No 7
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=99.73 E-value=1.4e-17 Score=171.22 Aligned_cols=144 Identities=15% Similarity=0.183 Sum_probs=106.3
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCc-cccccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCCCceEEEE
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNH-FDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLM 156 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~-~~~~~~~~kv~pGLss~~~-~p~~a~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ 156 (536)
+| .+||+|||+.||.|++...+... ++......++..|+..-.. +++.+.+.+..|-++++.. +.++.+.+++.
T Consensus 5 ~~-A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~---~~~~v~~v~~v 80 (315)
T 3mdq_A 5 RI-GVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVIL---DEHAVVHVIAT 80 (315)
T ss_dssp EE-EEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHH---HHTTCCEEEEE
T ss_pred eE-EEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHH---HHcCCCEEEEE
Confidence 44 59999999999999998763211 1111122344566544333 4455555666655555543 45677899999
Q ss_pred eechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeCCceeEEE
Q 009360 157 ATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVT 236 (536)
Q Consensus 157 ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQIt 236 (536)
||++||.. .|++++++.|++.+ |+. ++||||+|||.|.|+++...+.. ..+...++|+||||||++
T Consensus 81 ATsA~R~A--~N~~~fl~~i~~~t---G~~-----i~vIsG~eEA~l~~~gv~~~~~~----~~~~~lviDIGGGStEl~ 146 (315)
T 3mdq_A 81 GTSAVRSG--SNKQVLIDRIKKEV---NID-----VEVIDGAREAELIFRGVQQAVPM----EDHISLAMDIGGGSVEFI 146 (315)
T ss_dssp ECHHHHHC--TTHHHHHHHHHHHH---CCC-----EEECCHHHHHHHHHHHHHHHSCC----TTCCEEEEEECSSCEEEE
T ss_pred eeHHHHcC--cCHHHHHHHHHHHH---CCC-----eEEeCHHHHHHHHHHHHHhcCCC----CCCCEEEEEeCCCceEEE
Confidence 99999995 69999999999864 785 99999999999999999887642 224578999999999999
Q ss_pred eecC
Q 009360 237 FVSD 240 (536)
Q Consensus 237 f~~~ 240 (536)
+..+
T Consensus 147 ~~~~ 150 (315)
T 3mdq_A 147 IGNK 150 (315)
T ss_dssp EECS
T ss_pred EEEC
Confidence 9864
No 8
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=3.3e-16 Score=170.74 Aligned_cols=156 Identities=19% Similarity=0.205 Sum_probs=110.5
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCcccc-ccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCCCceEEE
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDF-DLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRL 155 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~-~~~~~kv~pGLss~~~-~p~~a~~~l~~ll~~a~~~IP~~~~~~Tpv~l 155 (536)
.+| .+||+|||+.|+.||+...+....-. .....+++.|+.+-.. +++.+.+.+..|-+|++.. +.++.+.+.+
T Consensus 15 ~~~-AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~---~~~~v~~v~~ 90 (508)
T 3hi0_A 15 APV-SVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLS---EQAQAQKLYV 90 (508)
T ss_dssp CCE-EEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---HHTTCSEEEE
T ss_pred CeE-EEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHH---HhCCCCeEEE
Confidence 345 59999999999999998653322111 1122345566654333 4555555555555555443 4566779999
Q ss_pred EeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeCCceeEE
Q 009360 156 MATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQV 235 (536)
Q Consensus 156 ~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQI 235 (536)
+||++||.. .|++++++.+++.+ |+. ++||||+|||.|+++||...+. .....++|+||||||+
T Consensus 91 vATsA~R~A--~N~~~fl~~i~~~t---G~~-----ievIsG~EEA~l~~~gv~~~~~------~~~~lvvDIGGGStEl 154 (508)
T 3hi0_A 91 LATAAAREA--ENGPDFIREAEAIL---GCE-----IEVLSGEKEALYSAYGVISGFY------QPDGIAGDLGGGSLEL 154 (508)
T ss_dssp EECTHHHHS--TTHHHHHHHHHHHH---TSC-----EEECCHHHHHHHHHHHHHHHSS------SCEEEEEEECSSCEEE
T ss_pred EeeHHHHcC--cCHHHHHHHHHHHH---CCC-----eEEecHHHHHHHHHHHHHhcCC------CCCeEEEEeCCCceEE
Confidence 999999995 69999999999864 886 9999999999999999987653 1234799999999999
Q ss_pred EeecCCCCCccceeeEEecC
Q 009360 236 TFVSDEPLPQEFSRTLKFGN 255 (536)
Q Consensus 236 tf~~~~~~~~~~~~~~~l~g 255 (536)
++..+.. .....++.+|.
T Consensus 155 ~~~~~~~--~~~~~Sl~lG~ 172 (508)
T 3hi0_A 155 IDIKDKS--CGEGITLPLGG 172 (508)
T ss_dssp EEEETTE--ECCCEEESCCH
T ss_pred EEeeCCe--eeeEEEecceE
Confidence 9986542 23344555553
No 9
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=99.65 E-value=3.6e-16 Score=170.62 Aligned_cols=142 Identities=16% Similarity=0.207 Sum_probs=103.6
Q ss_pred EEEEEcCCcceEEEEEEEeCCCCc-cccccceeecCCCCcccCC-CcchHHHHHHHHHHHHHHhCCCCCCCCceEEEEee
Q 009360 81 GVLLDGGSTGTRIHVFSYDTETNH-FDFDLGSMRLNPGLSSYAV-NPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMAT 158 (536)
Q Consensus 81 ~iVIDaGSsgtRl~Vy~~~~~~~~-~~~~~~~~kv~pGLss~~~-~p~~a~~~l~~ll~~a~~~IP~~~~~~Tpv~l~AT 158 (536)
..+||+|||+.|+.||+...+... ++......+++.|+..-.. +++.+.+.+..|-++++.. +.++.+.++++||
T Consensus 13 ~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~---~~~~v~~v~~vAT 89 (513)
T 1u6z_A 13 FAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL---QGFSPASVCIVGT 89 (513)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT---TTCCGGGEEEEEC
T ss_pred EEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH---HhCCCCEEEEEec
Confidence 459999999999999999753211 1101122344455543322 3455555555555554443 5667789999999
Q ss_pred chhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeCCceeEEEee
Q 009360 159 AGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFV 238 (536)
Q Consensus 159 AGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQItf~ 238 (536)
++||.. .|++++++.|++. +|+. ++||||+|||.|+|+||...+.. .+...++|+||||||+++.
T Consensus 90 sA~R~A--~N~~~fl~~i~~~---tG~~-----i~vIsG~eEA~l~~~gv~~~~~~-----~~~~lviDIGGGStEl~~~ 154 (513)
T 1u6z_A 90 HTLRQA--LNATDFLKRAEKV---IPYP-----IEIISGNEEARLIFMGVEHTQPE-----KGRKLVIDIGGGSTELVIG 154 (513)
T ss_dssp HHHHHC--TTHHHHHHHHTTT---CSSC-----EEECCHHHHHHHHHHHHHHHSCC-----CSCEEEEEECSSCEEEEEE
T ss_pred HHHHcC--cCHHHHHHHHHHH---HCCC-----EEEeCHHHHHHHHHHHHHhhccC-----CCCEEEEEECCCcEEEEEE
Confidence 999995 6999999999975 4886 99999999999999999887642 1257899999999999987
Q ss_pred cC
Q 009360 239 SD 240 (536)
Q Consensus 239 ~~ 240 (536)
.+
T Consensus 155 ~~ 156 (513)
T 1u6z_A 155 EN 156 (513)
T ss_dssp ET
T ss_pred eC
Confidence 53
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.95 E-value=7.3e-05 Score=73.59 Aligned_cols=133 Identities=13% Similarity=0.098 Sum_probs=77.3
Q ss_pred CCCceEEEEEEcCCcceEEEEEEEeCCCCccccccceeecCCCCcc-cCCCcchHHHHHHHHHHHHHHhCCCCCCCCceE
Q 009360 75 PSSVKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSS-YAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEI 153 (536)
Q Consensus 75 ~~~~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~kv~pGLss-~~~~p~~a~~~l~~ll~~a~~~IP~~~~~~Tpv 153 (536)
+.+.+|.++||.|||++|+.|+. .+...+. ....+ ..++.. ...|.+.+.+.++.+++.+.+..+.. ...+
T Consensus 24 ~~~~~~~~gIDiGS~s~k~vi~~--~~~~~l~--~~~~~-~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~---~~~~ 95 (272)
T 3h1q_A 24 PLPPPYKVGVDLGTADIVLVVTD--QEGIPVA--GALKW-ASVVKDGLVVDYIGAIQIVRELKAKVERLLGSE---LFQA 95 (272)
T ss_dssp CCCSCCEEEEECCSSEEEEEEEC--TTCCEEE--EEEEE-CCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSC---CCEE
T ss_pred CCCCCEEEEEEcccceEEEEEEC--CCCcEEE--EEeec-ccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCc---cCeE
Confidence 34456789999999999999953 2221221 11111 112222 12356777888888888888764332 1122
Q ss_pred EEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeCCcee
Q 009360 154 RLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASV 233 (536)
Q Consensus 154 ~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaSt 233 (536)
.+|...+. ..++.+.++.+.+ ..++. +.+|.++.|+..-. .| .....++|+||+||
T Consensus 96 --v~tvp~~~--~~~~~~~~~~~~~---~~g~~-----~~~i~~e~~A~a~~------~~------~~~~~viDiGggst 151 (272)
T 3h1q_A 96 --ATAIPPGT--VGRNAEACGHVVA---GAGLE-----LVTLVDEPVAAARA------LG------INDGIVVDIGGGTT 151 (272)
T ss_dssp --EEECCSCC-----CTTHHHHHHH---HTTCE-----EEEEECHHHHHHHH------HT------CSSEEEEEECSSCE
T ss_pred --EEEcCCCC--CHHHHHHHHHHHH---HcCCe-----eeecccHHHHHHHH------Hc------CCCEEEEEECCCcE
Confidence 23322222 2344455554433 35775 88999999987322 12 12457999999999
Q ss_pred EEEeec
Q 009360 234 QVTFVS 239 (536)
Q Consensus 234 QItf~~ 239 (536)
+++...
T Consensus 152 ~~~~~~ 157 (272)
T 3h1q_A 152 GIAVIE 157 (272)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998764
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=94.11 E-value=0.42 Score=48.78 Aligned_cols=57 Identities=19% Similarity=0.161 Sum_probs=35.1
Q ss_pred EEEEEEcCCcceEEEEEEEeCCCCccccccceeecC-CCCcc-cCCCcchHHHHHHHHHHHH
Q 009360 80 YGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLN-PGLSS-YAVNPTNAGDSLKDLLDFA 139 (536)
Q Consensus 80 y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~kv~-pGLss-~~~~p~~a~~~l~~ll~~a 139 (536)
..+-||.||+.+++.+.+ .+++.+.. .....+. .|+.. -..|++.+.+.|+.+++.+
T Consensus 14 ~~vgiDiGt~~i~~~~~~--~~~~~i~~-~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~~ 72 (377)
T 2ych_A 14 EALGLEIGASALKLVEVS--GNPPALKA-LASRPTPPGLLMEGMVAEPAALAQEIKELLLEA 72 (377)
T ss_dssp CCEEEEECSSEEEEEEEE--TTTTEEEE-EEEEECCTTSEETTEESCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCeEEEEEEe--CCceEEEE-EEeEECCCCcccCCCcCCHHHHHHHHHHHHHHc
Confidence 457999999999999885 44433321 1111111 12211 2347888899999998874
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=94.02 E-value=0.84 Score=46.59 Aligned_cols=120 Identities=17% Similarity=0.195 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 129 ~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
...|+.+.+.|++.+... .+.+.+---|.. +..+++.+.++++. .|+. .+++++..+=+.+
T Consensus 135 a~~l~~l~~~a~~~~~~~---~~~~vitvP~~~---~~~~r~~~~~a~~~----aGl~----~~~li~Ep~Aaa~----- 195 (394)
T 3qfu_A 135 GMILGKMKQIAEDYLGTK---VTHAVVTVPAYF---NDAQRQATKDAGTI----AGLN----VLRIVNEPTAAAI----- 195 (394)
T ss_dssp HHHHHHHHHHHHHHHTSC---CCEEEEEECTTC---CHHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHH-----
T ss_pred HHHHHHHHHHHHHhcCCC---cceEEEEECCCC---CHHHHHHHHHHHHH----cCCc----eEEEecCHHHHHH-----
Confidence 456677777777665422 334554444432 23455555555443 3663 2566653332222
Q ss_pred HHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEeec-ccccHHHHHHHHHHHhc
Q 009360 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELLS 282 (536)
Q Consensus 209 Nyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthSf-LgyG~~~Ar~~~l~~l~ 282 (536)
.|.+.. .+...++.++|+|||.|.++.... ++..+.+...+. ..+|.+..-+++.+.+.
T Consensus 196 ~~~~~~--~~~~~~vlV~D~Gggt~dvsv~~~-------------~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 196 AYGLDK--SDKEHQIIVYDLGGGTFDVSLLSI-------------ENGVFEVQATSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp HTTTTS--CSSCEEEEEEEECSSCEEEEEEEE-------------ETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHhhcc--CCCCceEEEEEcCCCceeEEEEEE-------------eCCEEEEEEEcCCCCCChHHHHHHHHHHHH
Confidence 232221 123457789999999999987642 222344444444 67888887777776665
No 13
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=92.77 E-value=0.32 Score=51.25 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=48.4
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCccccccceeecCCCCcc-cCCCcchHHHHHHHHHHHHHHhCCCCCCCCce-EEE
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSS-YAVNPTNAGDSLKDLLDFAKRKVPPAFWADTE-IRL 155 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~kv~pGLss-~~~~p~~a~~~l~~ll~~a~~~IP~~~~~~Tp-v~l 155 (536)
.++.+.||+||+..++.|-+...+...+. ...... ..|+.. -..|.+++.++|+.+++.|++....+ ... +++
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~~~~~~i~-g~~~~~-s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~~---i~~~v~v 81 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKRDQEWEAL-AFSSVK-SRGLDEGEIKDAIAFKESVNTLLKELEEQLQKS---LRSDFVI 81 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC----CEEE-EEEEEE-CCSEETTEESBHHHHHHHHHHHHHHHHHHHTSC---CCSEEEE
T ss_pred CCEEEEEEccCCEEEEEEEEEcCCCCEEE-EEEEec-cCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCCC---cCceEEE
Confidence 45778999999999999998654322221 111111 223322 24478899999999999998765432 334 666
Q ss_pred Eeech
Q 009360 156 MATAG 160 (536)
Q Consensus 156 ~ATAG 160 (536)
...++
T Consensus 82 ~i~g~ 86 (419)
T 4a2a_A 82 SFSSV 86 (419)
T ss_dssp EECCT
T ss_pred EEcCC
Confidence 66665
No 14
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=91.75 E-value=2.3 Score=43.79 Aligned_cols=123 Identities=12% Similarity=0.145 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 129 ~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
...|+.+.+.|++.+.. ..+.+.+.--+..- ..+++.+.++++. .||. .+++|+..+-+.+
T Consensus 132 ~~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~---~~~r~~~~~a~~~----AGl~----~~~li~Ep~AAa~----- 192 (409)
T 4gni_A 132 TRYLRRLVGAASEYLGK---KVTSAVITIPTNFT---EKQKAALIAAAAA----ADLE----VLQLISEPAAAVL----- 192 (409)
T ss_dssp HHHHHHHHHHHHHHHTS---CCCEEEEEECTTCC---HHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEEECCCCC---HHHHHHHHHHHHH----cCCC----eEEEEcCHHHHHH-----
Confidence 56778888888776532 22345544444432 3455555555554 3663 3566664443333
Q ss_pred HHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEee-cccccHHHHHHHHHHHhcc
Q 009360 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHS-FLHFGQNVAFETLRELLSS 283 (536)
Q Consensus 209 Nyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthS-fLgyG~~~Ar~~~l~~l~~ 283 (536)
.|+...-..+...++.++|+|||.+.++...- .+..+.+-.++ -..+|.+..-+.+.+.+..
T Consensus 193 ~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~-------------~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~ 255 (409)
T 4gni_A 193 AYDARPEATISDKIIVVADLGGSRSDVTVLAS-------------RSGMYTILATVHDYEYHGIALDKVLIDHFSK 255 (409)
T ss_dssp HTTC------CCEEEEEEEECSSCEEEEEEEE-------------ETTEEEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHhcccccCCCCCEEEEEECCCCceEEEEEEE-------------eCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 33332100123457889999999999987532 12234444443 3678888877777666553
No 15
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=90.03 E-value=6.8 Score=40.00 Aligned_cols=122 Identities=16% Similarity=0.189 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 129 ~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
...|+.+.+.|++.+.. ..+.+.+---|.. +..+++.+.++++. .||. .+++|+..+-+.++
T Consensus 140 a~~L~~l~~~a~~~~~~---~~~~~vitvPa~~---~~~~r~~~~~a~~~----AGl~----~~~li~Ep~AAa~~---- 201 (404)
T 3i33_A 140 SMVLTKMKEIAEAYLGG---KVHSAVITVPAYF---NDSQRQATKDAGTI----TGLN----VLRIINEPTAAAIA---- 201 (404)
T ss_dssp HHHHHHHHHHHHHHHSS---CCCEEEEEECTTC---CHHHHHHHHHHHHH----HTCE----EEEEEEHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHhcc---CCCcEEEEECCCC---CHHHHHHHHHHHHH----cCCC----eEEEeccHHHHHHH----
Confidence 34556666666665422 1234444433332 23455555555443 3663 36677654444433
Q ss_pred HHhhccCCC-CCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEeec-ccccHHHHHHHHHHHhc
Q 009360 209 NYALGTLGG-DPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELLS 282 (536)
Q Consensus 209 Nyllg~l~~-~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthSf-LgyG~~~Ar~~~l~~l~ 282 (536)
|.+..-.. ....++.++|+|||.+.++...- .+..+.+...+. ..+|.+..-+++.+.+.
T Consensus 202 -~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~-------------~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~ 263 (404)
T 3i33_A 202 -YGLDKKGCAGGEKNVLIFDLGGGTFDVSILTI-------------EDGIFEVKSTAGDTHLGGEDFDNRMVSHLA 263 (404)
T ss_dssp -TTTTSSCSSSSCCEEEEEEECSSCEEEEEEEE-------------ETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred -HHhhcccccCCCceEEEEECCCCcEEEEEEEE-------------eCCeEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 33221100 03457889999999999987532 122333433333 67888877777666654
No 16
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=89.80 E-value=2.4 Score=43.38 Aligned_cols=87 Identities=13% Similarity=0.079 Sum_probs=48.1
Q ss_pred HHHHHHHHHHH-HhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 130 DSLKDLLDFAK-RKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 130 ~~l~~ll~~a~-~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
+.++.+++++- +.+... ....|+.+--.+. .+..+++++.+.+-+. .++. .+.++ +|+..+
T Consensus 80 d~~e~i~~~~~~~~L~~~-~~~~~vvit~p~~---~~~~~r~~~~e~~fe~---~g~~----~~~~~---~e~~aa---- 141 (375)
T 2fxu_A 80 DDMEKIWHHTFYNELRVA-PEEHPTLLTEAPL---NPKANREKMTQIMFET---FNVP----AMYVA---IQAVLS---- 141 (375)
T ss_dssp HHHHHHHHHHHHTTSCCC-GGGSCEEEEECTT---CCHHHHHHHHHHHHHT---TCCS----EEEEE---EHHHHH----
T ss_pred HHHHHHHHHHHHHhcCCC-CcCCcEEEEeCCC---CcHHHHHHHHHHHHHh---cCcc----eEEEc---cchhee----
Confidence 45566666664 333222 2345666655443 3456666666655442 2332 24554 344443
Q ss_pred HHhhccCCCCCCCceEEEeeCCceeEEEeecC
Q 009360 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSD 240 (536)
Q Consensus 209 Nyllg~l~~~~~~t~G~lDlGGaStQItf~~~ 240 (536)
-|..| ..+.-++|+||+.|.|+-..+
T Consensus 142 a~a~g------~~~~lVvDiG~gtt~v~~v~~ 167 (375)
T 2fxu_A 142 LYASG------RTTGIVLDSGDGVTHNVPIYE 167 (375)
T ss_dssp HHHTT------CSSEEEEEECSSCEEEEEEET
T ss_pred eeecC------CCeEEEEEcCCCceEEeEeEC
Confidence 34444 246779999999999976543
No 17
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=89.39 E-value=5.9 Score=43.44 Aligned_cols=124 Identities=18% Similarity=0.266 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 129 ~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
...|+.|.+.|...+.. ..+.+.+---|.. ...+++.+.++++. .|+. .+++|+...=+. +
T Consensus 117 a~iL~~lk~~ae~~lg~---~v~~~VITVPa~f---~~~qr~a~~~Aa~~----AGl~----v~~li~EP~AAA-----l 177 (605)
T 4b9q_A 117 AEVLKKMKKTAEDYLGE---PVTEAVITVPAYF---NDAQRQATKDAGRI----AGLE----VKRIINEPTAAA-----L 177 (605)
T ss_dssp HHHHHHHHHHHHHHHTS---CCCEEEEEECTTC---CHHHHHHHHHHHHH----TTCE----EEEEEEHHHHHH-----H
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEEECCCC---CHHHHHHHHHHHHH----cCCc----eEEEeCcHHHHH-----H
Confidence 34566666666655422 1233333333332 23444444444443 3553 256665444333 3
Q ss_pred HHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEeec-ccccHHHHHHHHHHHhc
Q 009360 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELLS 282 (536)
Q Consensus 209 Nyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthSf-LgyG~~~Ar~~~l~~l~ 282 (536)
.|.+.. .+...++.++|+|||.+.++...-....+ ...+.+-+++. ..+|.+..-+++.+++.
T Consensus 178 aygl~~--~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~---------~~~~evla~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 4b9q_A 178 AYGLDK--GTGNRTIAVYDLGGGAFDISIIEIDEVDG---------EKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp HHHTTS--CCSSEEEEEEEECSSCEEEEEEEEEESSS---------CEEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred Hhhhhc--cCCCCEEEEEECCCCeEEEEEEEEecCCC---------CceEEEEEecCCCCcChHHHHHHHHHHHH
Confidence 344332 12345788999999999998764221111 12334444444 66788777666666554
No 18
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=85.31 E-value=10 Score=40.42 Aligned_cols=123 Identities=16% Similarity=0.233 Sum_probs=65.6
Q ss_pred cchH-HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchh
Q 009360 125 PTNA-GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVY 203 (536)
Q Consensus 125 p~~a-~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y 203 (536)
|+++ ...|+.|.+.|++.+.. ..+.+.+---|. .+..+++++.++++. .|+. .+++|+-..=+.+
T Consensus 86 ~~ei~a~~L~~l~~~ae~~l~~---~~~~~VitvPa~---~~~~qr~a~~~a~~~----AGl~----~~~li~Ep~AAAl 151 (509)
T 2v7y_A 86 PQEISAIILQYLKSYAEDYLGE---PVTRAVITVPAY---FNDAQRQATKDAGRI----AGLE----VERIINEPTAAAL 151 (509)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTT---CCHHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCC---CCHHHHHHHHHHHHH----cCCC----eEEEecCHHHHHH
Confidence 4554 35667777777765532 234566544443 234566666665543 3653 2566643332222
Q ss_pred HHHHHHHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEeec-ccccHHHHHHHHHHHhc
Q 009360 204 AWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELLS 282 (536)
Q Consensus 204 ~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthSf-LgyG~~~Ar~~~l~~l~ 282 (536)
.|.+.. ....++.++|+|||.+.++..... +-.+.+-+.+. ..+|.+..-+++.+++.
T Consensus 152 -----ay~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~-------------~g~~~v~a~~g~~~lGG~d~d~~l~~~l~ 210 (509)
T 2v7y_A 152 -----AYGLDK---EEDQTILVYDLGGGTFDVSILELG-------------DGVFEVKATAGDNHLGGDDFDQVIIDYLV 210 (509)
T ss_dssp -----HTTGGG---SCSEEEEEEEECSSCEEEEEEEEE-------------TTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred -----HHhhcc---CCCCEEEEEECCCCeEEEEEEEEc-------------CCeEEEEEecCCCCcCHHHHHHHHHHHHH
Confidence 343332 133578899999999999865321 11223333332 45677666555555443
No 19
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=82.82 E-value=12 Score=40.26 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHh-CCCCCCCCc-eEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHH
Q 009360 130 DSLKDLLDFAKRK-VPPAFWADT-EIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIV 207 (536)
Q Consensus 130 ~~l~~ll~~a~~~-IP~~~~~~T-pv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~ 207 (536)
+.++.+++.+-.. +... .... ||.+.-... .+..+++++.+.+-+ .+++ +. +-++ +|++.+
T Consensus 93 d~~E~iw~~~f~~~L~v~-p~~~~pvlltep~~---n~~~~Re~~~eilFE---~f~v--pa--v~l~---~~~vla--- 155 (498)
T 3qb0_A 93 DTAQEQWQWALQNELYLN-SNSGIPALLTEPVW---NSTENRKKSLEVLLE---GMQF--EA--CYLA---PTSTCV--- 155 (498)
T ss_dssp HHHHHHHHHHHHHTSCCS-CCTTCCEEEEECTT---CCHHHHHHHHHHHHT---TSCC--SE--EEEE---EHHHHH---
T ss_pred HHHHHHHHHHHHhhhCCC-cccCCceEEEeCCC---CcHHHHHHHHHHHHh---hcCC--Ce--Eeec---chHHHH---
Confidence 5566666665432 2211 1123 775544432 445566666554433 2233 22 3333 344333
Q ss_pred HHHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCe
Q 009360 208 ANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNV 256 (536)
Q Consensus 208 vNyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~ 256 (536)
-|..|. .|.-+||+|++.|+|+-..+...-+.....++++|.
T Consensus 156 -lya~G~------~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~ 197 (498)
T 3qb0_A 156 -SFAAGR------PNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGK 197 (498)
T ss_dssp -HHHHTC------SSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHH
T ss_pred -HHHcCC------CeEEEEEcCCCcEEEEEEeCCEEccccceeccccHH
Confidence 355552 345689999999999877543322233344444443
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=71.82 E-value=11 Score=36.81 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=59.0
Q ss_pred EEEEEEcCCcceEEEEEEEeCCCCccccccceeec-CCCCcccCCCcchHHHHHHHHHHHHHH-hCCCCCCCCceEEEEe
Q 009360 80 YGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRL-NPGLSSYAVNPTNAGDSLKDLLDFAKR-KVPPAFWADTEIRLMA 157 (536)
Q Consensus 80 y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~kv-~pGLss~~~~p~~a~~~l~~ll~~a~~-~IP~~~~~~Tpv~l~A 157 (536)
|.+-||.|||.|++.++.-+ ++ .+. .... .+| +|.+ .+..+++.+.+ .++.. ....+.+
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~-g~-i~~----~~~~~~~~------~~~~---~~~~~l~~l~~~~~~~~----~i~~i~~ 64 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDG-KE-IVA----KSLVAVGT------GTSG---PARSISEVLENAHMKKE----DMAFTLA 64 (270)
T ss_dssp EEEEEEECSSEEEEEEEETT-TE-EEE----EEEEECCS------SCCH---HHHHHHHHHHHHTCCGG----GCSEEEE
T ss_pred EEEEEEeccceEEEEEEeCC-CC-EEE----EEEecCCC------CHHH---HHHHHHHHHHHcCCChh----HEEEEEE
Confidence 66899999999999998521 11 221 1111 232 4543 34445554443 33321 2246777
Q ss_pred echhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeCCceeEEEe
Q 009360 158 TAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTF 237 (536)
Q Consensus 158 TAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQItf 237 (536)
|.-+|.+=. . +. ..+ .+|-.=.-.++.|+.. +.-.++|+||..+.+.+
T Consensus 65 TG~g~~~~~---------------~--~~-----~~~---v~Ei~ah~~ga~~~~~-------~~~~vidiGGqd~k~i~ 112 (270)
T 1hux_A 65 TGYGRNSLE---------------G--IA-----DKQ---MSELSCHAMGASFIWP-------NVHTVIDIGGQDVKVIH 112 (270)
T ss_dssp ESTTTTTTT---------------T--TC-----SEE---ECHHHHHHHHHHHHCT-------TCCEEEEEETTEEEEEE
T ss_pred eCccccchh---------------h--cC-----CCC---cccHHHHHHHHHHhCC-------CCCEEEEECCCceEEEE
Confidence 887765310 0 10 112 2333333456666643 12248999999999988
Q ss_pred ec
Q 009360 238 VS 239 (536)
Q Consensus 238 ~~ 239 (536)
..
T Consensus 113 ~~ 114 (270)
T 1hux_A 113 VE 114 (270)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 21
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=71.71 E-value=33 Score=32.88 Aligned_cols=141 Identities=17% Similarity=0.178 Sum_probs=74.4
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCccccccceeecCCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCCCCceEEEEee
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWADTEIRLMAT 158 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~~~IP~~~~~~Tpv~l~AT 158 (536)
.|.+=||+|||.|-+-|.+ .++..+. +....- ...|+.+.+.|+.+++.|.. . ........+|
T Consensus 1 M~~lGID~GsT~tk~av~d--~~~~il~----~~~~~~-----g~~~e~a~~vl~~~~~~a~~----~--~~~~~~~a~t 63 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILK--NGEDIVA----SETISS-----GTGTTGPSRVLEKLYGKTGL----A--REDIKKVVVT 63 (276)
T ss_dssp CEEEEEEECSSCEEEEEEE--TTTEEEE----EEEESC-----CTTSSHHHHHHHHHHHHHCC----C--GGGEEEEEEE
T ss_pred CeEEEEEcCccEEEEEEEE--CCCeEEE----EEEecC-----CCCHHHHHHHHHHHHHHCCC----c--chhccccccC
Confidence 3667899999999988774 3221111 111111 23466677777777766532 1 2234566677
Q ss_pred chhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHHHHhhccCCCCCCCceEEEeeCCceeEEEee
Q 009360 159 AGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFV 238 (536)
Q Consensus 159 AGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQItf~ 238 (536)
.+-|+.- ... .+.|+ |-.=...++.++.. ....++|+||+.+.+...
T Consensus 64 ~~~~~a~------------------~~~-----~~~Vn---e~~aha~a~~~~~~-------~~~~vl~lgG~~~~~~~~ 110 (276)
T 4ehu_A 64 GYGRMNY------------------SDA-----DKQIS---ELSCHARGVNFIIP-------ETRTIIDIGGQDAKVLKL 110 (276)
T ss_dssp STTGGGC------------------CSC-----SEECC---HHHHHHHHHHHHST-------TCCEEEEECSSCEEEEEE
T ss_pred chHHHHh------------------hCC-----Ccccc---hHHHHHHHHHHhCC-------CCCeEEEEcCCCceEEEE
Confidence 7776631 111 23333 22212344444422 345799999999888776
Q ss_pred cCCCCCccceeeEEecCeeEEEEEeecccccHHHHHHHHHHHhc
Q 009360 239 SDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLS 282 (536)
Q Consensus 239 ~~~~~~~~~~~~~~l~g~~y~vYthSfLgyG~~~Ar~~~l~~l~ 282 (536)
..+. ....+.+++. ..-|..++.+++...|.
T Consensus 111 ~~~g----~~~~~~~~~~---------~~~g~G~f~d~~a~~l~ 141 (276)
T 4ehu_A 111 DNNG----RLLNFLMNDK---------CAAGTGRFLDVMAKIIE 141 (276)
T ss_dssp CTTS----CEEEEEEECS---------CSTTSHHHHHHHHHHHT
T ss_pred EecC----ceEEEEeCCC---------cCcchhhHHHHHHHHhc
Confidence 3221 1111222222 34466677776665554
No 22
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=63.24 E-value=9 Score=41.14 Aligned_cols=61 Identities=21% Similarity=0.248 Sum_probs=36.8
Q ss_pred CceEEEEEEcCCcceEEEEEEEeCCCCcccc---ccceeecCCCCcccCCCcchHHHHHHHHHHHHHH
Q 009360 77 SVKYGVLLDGGSTGTRIHVFSYDTETNHFDF---DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (536)
Q Consensus 77 ~~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~---~~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~~ 141 (536)
..+|.+.||.|+|++|..||.- .++ .+.. +.....-.||-+ ..||++..+.+..++..+.+
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~-~G~-~va~~~~~~~~~~p~~G~~--Eqdp~~~w~~~~~~i~~~l~ 65 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDH-DAN-IISVSQREFEQIYPKPGWV--EHDPMEIWATQSSTLVEVLA 65 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECT-TCC-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEccccceeeeEEcC-CCC-EEEEEEEecCcccCCCCcE--EECHHHHHHHHHHHHHHHHH
Confidence 3589999999999999999862 222 2211 001111245643 35888877666666665543
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=59.70 E-value=85 Score=31.22 Aligned_cols=47 Identities=11% Similarity=0.200 Sum_probs=29.6
Q ss_pred CCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEeecccccHHHHHHHHHHHh
Q 009360 220 SETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELL 281 (536)
Q Consensus 220 ~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthSfLgyG~~~Ar~~~l~~l 281 (536)
...+.++|+||+.|.++.......-.. ++.| +-.|.+...+.+.+.+
T Consensus 171 ~~~v~vvDiGggTtd~~v~~~g~~~~~--------------~~~~-~~~G~~~~~~~i~~~l 217 (329)
T 4apw_A 171 NKNVAVIDFGGLNMGFSLYRNCVVNPS--------------ERFI-EEHGVKDLIIRVGDAL 217 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEETTEECGG--------------GCEE-ESCCHHHHHHHHHTSS
T ss_pred cCCEEEEEeCCCcEEEEEEECCEEeec--------------cccc-hhhHHHHHHHHHHHHH
Confidence 457899999999999988753211000 1122 3478888777665443
No 24
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=58.03 E-value=12 Score=26.80 Aligned_cols=18 Identities=11% Similarity=-0.071 Sum_probs=10.8
Q ss_pred HHHHHHHHHhhhccCCcc
Q 009360 502 MLMVIAWSISKWRKPQLK 519 (536)
Q Consensus 502 ~~~~~~~~~~~~r~~~~k 519 (536)
+++++.++++|.|+.|.|
T Consensus 26 ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 26 VVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp HHHHHHHHHHHTTTCCSC
T ss_pred HHHHHHHHHhhhhHhhcc
Confidence 444555567777776654
No 25
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=54.21 E-value=1e+02 Score=33.06 Aligned_cols=121 Identities=14% Similarity=0.174 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 129 ~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
...|+.+.+.|++.+.. ..+.+.+---|.. +..+++++.++++ ..|+. .+++|+-..-+. +
T Consensus 121 a~~L~~lk~~ae~~lg~---~v~~~VitVPa~f---~~~qr~a~~~A~~----~AGl~----~~~li~EP~AAA-----l 181 (554)
T 1yuw_A 121 SMVLTKMKEIAEAYLGK---TVTNAVVTVPAYF---NDSQRQATKDAGT----IAGLN----VLRIINEPTAAA-----I 181 (554)
T ss_dssp HHHHHHHHHHHHHHHSS---CCCEEEEEECTTC---CHHHHHHHHHHHH----TTTCE----EEEEEEHHHHHH-----H
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEEECCCC---CHHHHHHHHHHHH----HcCCC----eEEEeCcHHHHH-----H
Confidence 35667777777766532 2345655555543 2345555555444 34664 367776443333 3
Q ss_pred HHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEeec-ccccHHHHHHHHHHHhc
Q 009360 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELLS 282 (536)
Q Consensus 209 Nyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthSf-LgyG~~~Ar~~~l~~l~ 282 (536)
.|.+..-. ...+++.++|+|||.+.++...-. +..+.|-.++. ..+|.+..-+++.+++.
T Consensus 182 ay~~~~~~-~~~~~vlV~D~GgGT~Dvsv~~~~-------------~g~~~v~a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 182 AYGLDKKV-GAERNVLIFDLGGGTFDVSILTIA-------------AGIFEVKSTAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp HTTCSTTC-SSCEEEEEEEECSSCEEEEEEEEE-------------TTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHHhhccC-CCCcEEEEEEcCCCeEEEEEEEEc-------------CCcEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 34433211 123578899999999999865321 11223333333 45677666555555443
No 26
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=53.44 E-value=96 Score=30.97 Aligned_cols=128 Identities=20% Similarity=0.283 Sum_probs=64.0
Q ss_pred cchH-HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchh
Q 009360 125 PTNA-GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVY 203 (536)
Q Consensus 125 p~~a-~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y 203 (536)
|+++ ...|+.+.+.|++.+.. ..+.+.+.--+. .+..+++.+.+.++. .|+. .++++ .|..=
T Consensus 112 ~~~i~~~~L~~l~~~a~~~~~~---~~~~~vitvP~~---~~~~~r~~~~~a~~~----aGl~----~~~li---~Ep~A 174 (383)
T 1dkg_D 112 PPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAY---FNDAQRQATKDAGRI----AGLE----VKRII---NEPTA 174 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSS---CCCEEEECBCTT---CCHHHHHHHHHHHHH----TTCE----ESCCC---BHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCC---CCHHHHHHHHHHHHH----cCCc----eEEEe---ccHHH
Confidence 4443 45667777777765432 123454433332 234556666555443 3553 12333 34322
Q ss_pred HHHHHHHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEeec-ccccHHHHHHHHHHHhc
Q 009360 204 AWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSF-LHFGQNVAFETLRELLS 282 (536)
Q Consensus 204 ~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthSf-LgyG~~~Ar~~~l~~l~ 282 (536)
+ ++.|.+.. .....++.++|+|||.|.++........+ +..+.+-+++. ..+|.+..-+.+.+.+.
T Consensus 175 a--a~~~~~~~--~~~~~~~lVvD~Gggttdvsv~~~~~~~~---------~~~~~v~~~~~~~~lGG~~id~~l~~~l~ 241 (383)
T 1dkg_D 175 A--ALAYGLDK--GTGNRTIAVYDLGGGTFDISIIEIDEVDG---------EKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (383)
T ss_dssp H--HHHHTCCC---CCEEEEEEEEECSSCEEEEEEEEEC-------------CCCEEEEEEEESSCSHHHHHHHHHHHHH
T ss_pred H--HHHHHhcc--CCCCcEEEEEEcCCCeEEEEEEEEEecCC---------CCeEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 2 22344321 01234678999999999998764321110 01223333332 56888877666666554
No 27
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=52.77 E-value=17 Score=26.04 Aligned_cols=18 Identities=6% Similarity=-0.047 Sum_probs=10.3
Q ss_pred HHHHHHHHHhhhccCCcc
Q 009360 502 MLMVIAWSISKWRKPQLK 519 (536)
Q Consensus 502 ~~~~~~~~~~~~r~~~~k 519 (536)
+++++.++++|.|+.|.|
T Consensus 25 ii~~~~~~~~RRRr~~~k 42 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSIKKK 42 (44)
T ss_dssp HHHHHHHHHHHTTCSSCC
T ss_pred HHHHHHHHHhhhhhhhhc
Confidence 334444566777766654
No 28
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=48.91 E-value=70 Score=31.55 Aligned_cols=116 Identities=17% Similarity=0.167 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHH
Q 009360 128 AGDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIV 207 (536)
Q Consensus 128 a~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~ 207 (536)
+.+.+..+++.+++. .....+++.+--.+. .+..+++.+.+.++. .||. .+++++ |..-+.+
T Consensus 76 ~~~i~~~~l~~~~~~---~~~~~~~~vitvP~~---~~~~~r~~~~~a~~~----aG~~----~~~li~---ep~Aaa~- 137 (344)
T 1jce_A 76 ALVMLRYFINKAKGG---MNLFKPRVVIGVPIG---ITDVERRAILDAGLE----AGAS----KVFLIE---EPMAAAI- 137 (344)
T ss_dssp HHHHHHHHHHHHHTS---CCSCCCEEEEEECTT---CCHHHHHHHHHHHHH----TTCS----EEEEEE---HHHHHHH-
T ss_pred HHHHHHHHHHHHhhc---cccCCCeEEEEECCC---CCHHHHHHHHHHHHH----cCCC----eEeccC---CHHHHHH-
Confidence 445556666665542 112235666655554 334566666555443 3553 255554 3322222
Q ss_pred HHHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEeecccccHHHHHHHHHHHhc
Q 009360 208 ANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHSFLHFGQNVAFETLRELLS 282 (536)
Q Consensus 208 vNyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthSfLgyG~~~Ar~~~l~~l~ 282 (536)
.|.+. .....++.++|+|||.|.++...... .+++ .-+.+|.+..-+.+.+.+.
T Consensus 138 -~~~~~---~~~~~~~lVvDiGggttdvsv~~~~~----------------~~~~-~~~~lGG~~id~~l~~~l~ 191 (344)
T 1jce_A 138 -GSNLN---VEEPSGNMVVDIGGGTTEVAVISLGS----------------IVTW-ESIRIAGDEMDEAIVQYVR 191 (344)
T ss_dssp -HTTCC---TTSSSCEEEEEECSSCEEEEEEETTE----------------EEEE-EEESCSHHHHHHHHHHHHH
T ss_pred -hcCCC---CCCCceEEEEEeCCCeEEEEEEEcCC----------------EEee-CCCCccChhHHHHHHHHHH
Confidence 12221 12235788999999999998764321 0122 2246788777666665554
No 29
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=48.49 E-value=20 Score=25.66 Aligned_cols=18 Identities=22% Similarity=0.300 Sum_probs=9.9
Q ss_pred HHHHHHHHHhhhccCCcc
Q 009360 502 MLMVIAWSISKWRKPQLK 519 (536)
Q Consensus 502 ~~~~~~~~~~~~r~~~~k 519 (536)
++++++++++|.|+.|.|
T Consensus 26 i~~l~~~~~~RRR~~~~k 43 (44)
T 2jwa_A 26 VLGVVFGILIKRRQQKIR 43 (44)
T ss_dssp HHHHHHHHHHHHHCSCCC
T ss_pred HHHHHHHhheehhhhhcc
Confidence 344444456666666654
No 30
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=47.85 E-value=15 Score=39.72 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=37.1
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCcccc---ccceeecCCCCcccCCCcchHHHHHHHHHHHHHH
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDF---DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~---~~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~~ 141 (536)
.+|.+.||.|+|++|+.+|.- .++ .+.. +.....-.||-. ..+|+...+.+..+++.+.+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~-~G~-il~~~~~~~~~~~p~~g~~--eqdp~~~~~~~~~~i~~~~~ 66 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL-QGR-MVGQASREITMFKPKADFV--EQSSENIWQAVCNAVRDAVN 66 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET-TSC-EEEEEEEECCCEEEETTEE--EECHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECcccEEEEEECC-CCC-EEEEEEEecccccCCCCcc--ccCHHHHHHHHHHHHHHHHH
Confidence 468899999999999999973 222 2211 000111235533 34788877777777766544
No 31
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=46.61 E-value=2.9e+02 Score=30.49 Aligned_cols=122 Identities=12% Similarity=0.155 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 129 GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 129 ~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
...|+.|.+.|...+.. ..+.+.+---|.. ...+++.+.++++. .|+. .+++|+...=+.++
T Consensus 120 a~~L~~lk~~ae~~lg~---~v~~~VITVPa~f---~~~qR~a~~~Aa~~----AGl~----~~~li~EP~AAAla---- 181 (675)
T 3d2f_A 120 AMFIDKVKDTVKQDTKA---NITDVCIAVPPWY---TEEQRYNIADAARI----AGLN----PVRIVNDVTAAGVS---- 181 (675)
T ss_dssp HHHHHHHHHHHHHHHCS---CCCEEEEEECTTC---CHHHHHHHHHHHHH----TTCE----EEEEEEHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHhCC---CcceEEEEECCCC---CHHHHHHHHHHHHH----cCCc----eEEEEcchHHHHHH----
Confidence 35667777777665532 2345555555543 23566666666554 3664 36777543333333
Q ss_pred HHhhcc--CCC--CCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCeeEEEEEee-cccccHHHHHHHHHHHhc
Q 009360 209 NYALGT--LGG--DPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVTYNLYSHS-FLHFGQNVAFETLRELLS 282 (536)
Q Consensus 209 Nyllg~--l~~--~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~y~vYthS-fLgyG~~~Ar~~~l~~l~ 282 (536)
|.+.. +.. ....++.++|+|||.+.|+...- .+..+.|.+++ -..+|.+..-+++..++.
T Consensus 182 -ygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~-------------~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~ 246 (675)
T 3d2f_A 182 -YGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAF-------------KKGQLKVLGTACDKHFGGRDFDLAITEHFA 246 (675)
T ss_dssp -HHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEE-------------ETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred -HhhhccccccccCCCcEEEEEEcCCCcEEEEEEEe-------------cCCeEEEEEEcCCCCccHHHHHHHHHHHHH
Confidence 33321 111 12357889999999999987531 11123444444 356777766666655553
No 32
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=45.52 E-value=53 Score=33.58 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=48.8
Q ss_pred HHHHHHHHHHH-HhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 130 DSLKDLLDFAK-RKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 130 ~~l~~ll~~a~-~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
+.++.+++.+- +.+... ....|+.+--.+. .+..+++++.+.+-+ ..++. .+.++ .|+..+-.+
T Consensus 87 d~~e~i~~~~~~~~L~~~-~~~~~vvit~p~~---~~~~~r~~~~e~~fe---~~g~~----~~~l~---~ep~aa~~a- 151 (418)
T 1k8k_A 87 DLMERFMEQVIFKYLRAE-PEDHYFLLTEPPL---NTPENREYTAEIMFE---SFNVP----GLYIA---VQAVLALAA- 151 (418)
T ss_dssp HHHHHHHHHHHHTTTCCC-GGGCCEEEEECTT---CCHHHHHHHHHHHHH---TSCCS----EEEEE---EHHHHHHHH-
T ss_pred HHHHHHHHHHHHhccCCC-CCCCcEEEEeCCC---CCHHHHHHHHHHHHH---hcCCC----EEEEe---chHHHHhhh-
Confidence 44566666664 233211 1245776655553 345666766665533 23442 24554 354444222
Q ss_pred HHhhccCCCCCCCceEEEeeCCceeEEEeecC
Q 009360 209 NYALGTLGGDPSETTGIIELGGASVQVTFVSD 240 (536)
Q Consensus 209 Nyllg~l~~~~~~t~G~lDlGGaStQItf~~~ 240 (536)
.|....+.... .+..++|+||+.|.|+-..+
T Consensus 152 ~~~~~~~~~~~-~~glVvDiG~gtt~v~~v~~ 182 (418)
T 1k8k_A 152 SWTSRQVGERT-LTGTVIDSGDGVTHVIPVAE 182 (418)
T ss_dssp GGGSTTCCSCC-CCEEEEEESSSCEEEEEEET
T ss_pred hhcccccCCCC-CeEEEEEcCCCceEEEEeEC
Confidence 11111121112 26679999999999987643
No 33
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=45.09 E-value=23 Score=37.70 Aligned_cols=60 Identities=20% Similarity=0.122 Sum_probs=36.2
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCcccc---ccceeecCCCCcccCCCcchHHHHHHHHHHHHHH
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDF---DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~---~~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~~ 141 (536)
.+|.+.||.|+|++|+.++. ..++ .+.. +.....-.||- ...+|+...+.+..+++.+.+
T Consensus 6 ~~~~lgIDiGtts~k~~l~d-~~G~-il~~~~~~~~~~~p~~g~--~e~dp~~~~~~i~~~i~~~~~ 68 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVR-LPDT-VVAVASRPTTLSSPHPGW--AEEDPAQWWDNARAVLAELKT 68 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEE-TTTE-EEEEEEEECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCcceEEEEEC-CCCC-EEEEEEEecceecCCCCc--eEECHHHHHHHHHHHHHHHHH
Confidence 46889999999999999997 2222 2211 00011113443 245788877777777776543
No 34
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=43.15 E-value=39 Score=35.89 Aligned_cols=62 Identities=16% Similarity=0.225 Sum_probs=39.4
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCccccccce---eecCCCCcccCCCcchHHHHHHHHHHHHHHhC
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGS---MRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKV 143 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~---~kv~pGLss~~~~p~~a~~~l~~ll~~a~~~I 143 (536)
.+|.+.||.|+|++|..++.-+ ++ .+...... ..-.||-. ..+|+...+.+..+++.+.+..
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~-G~-il~~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDIN-GK-AVASVSKGYPLIQTKVGQA--EEDPKLIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETT-SC-EEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEEecCCceEEEEEcCC-CC-EEEEEEeecceecCCCCcE--EECHHHHHHHHHHHHHHHHHhC
Confidence 4688999999999999999743 22 22110001 11235533 3478888888888888776553
No 35
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=41.26 E-value=94 Score=33.81 Aligned_cols=94 Identities=18% Similarity=0.292 Sum_probs=51.9
Q ss_pred cchH-HHHHHHHHHHHHHhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchh
Q 009360 125 PTNA-GDSLKDLLDFAKRKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVY 203 (536)
Q Consensus 125 p~~a-~~~l~~ll~~a~~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y 203 (536)
|+++ ...|+.+.+.|+..+.. ..+.+.+---|.. ...+++++.++++. .|+. -+++|+-..=+.
T Consensus 112 ~~ei~a~~L~~l~~~ae~~l~~---~v~~~VitVPa~f---~d~qr~a~~~A~~~----AGl~----v~~li~EP~AAA- 176 (605)
T 2kho_A 112 PPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYF---NDAQRQATKDAGRI----AGLE----VKRIINEPTAAA- 176 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCS---CCCEEEEEECTTC---CHHHHHHHHHHHHT----TTCE----EEEEEEHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCcEEEEEECCCC---CHHHHHHHHHHHHH----cCCc----eEEEecCHHHHH-
Confidence 4444 34667777777765432 2345555444432 23556665555443 4663 256665433222
Q ss_pred HHHHHHHhhccCCCCCCCceEEEeeCCceeEEEeec
Q 009360 204 AWIVANYALGTLGGDPSETTGIIELGGASVQVTFVS 239 (536)
Q Consensus 204 ~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQItf~~ 239 (536)
+.|.+..- ....++.++|+|||.+.|+...
T Consensus 177 ----lay~l~~~--~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 2kho_A 177 ----LAYGLDKG--TGNRTIAVYDLGGGTFDISIIE 206 (605)
T ss_dssp ----HHTTTTSS--SSEEEEEEEEECSSCEEEEEEE
T ss_pred ----HHhhhccc--CCCCEEEEEECCCCeEEEEEEE
Confidence 23443321 1235688999999999998764
No 36
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=40.09 E-value=44 Score=35.54 Aligned_cols=61 Identities=25% Similarity=0.290 Sum_probs=37.5
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCcccc---ccceeecCCCCcccCCCcchHHHHHHHHHHHHHHh
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDF---DLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRK 142 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~---~~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~~~ 142 (536)
.+|.+.||.|+|++|+.++.-+ ++ .+.. +.....-.||- ...+|+...+.+..+++.+.+.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~-G~-il~~~~~~~~~~~p~~g~--~e~dp~~~~~~~~~~i~~~~~~ 65 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHD-AN-IISVSQREFEQIYPKPGW--VEHDPMEIWATQSSTLVEVLAK 65 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTT-CC-EEEEEEEECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEcCCcceEEEEECCC-CC-EEEEEEEecccccCCCCc--EEECHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999642 22 2211 00001113443 2457888877777777766554
No 37
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=38.62 E-value=18 Score=38.58 Aligned_cols=59 Identities=15% Similarity=0.167 Sum_probs=34.2
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCccccc--cceeecCCCCcccCCCcchHHHHHHHHHHHHH
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFD--LGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAK 140 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~--~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~ 140 (536)
.+|.+.||.|+|++|+.+|. ..++ .+... .....-.||- ...||++..+.+..+++.+.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d-~~G~-i~~~~~~~~~~~~~~g~--~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWD-LDGR-MLDRQVRPSIPLEIDGI--RRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp ---CEEEEECSSEEEEEEEC-TTSC-EEEEEEEECCCEESSSC--EECCHHHHHHHHHHHHHHTT
T ss_pred hceEEEEEcCCCCeEEEEEE-CCCc-EEEEEEecCCcccCCCc--eeECHHHHHHHHHHHHHHHH
Confidence 35889999999999999997 3322 22110 0011123452 34578887777777776653
No 38
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=37.40 E-value=40 Score=35.77 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=36.4
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCcccccccee---ecCCCCcccCCCcchHHHHHHHHHHHHHH
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSM---RLNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~---kv~pGLss~~~~p~~a~~~l~~ll~~a~~ 141 (536)
.+|.+.||.|+|++|+.++..+. + .+....... .-.||- ...+|+...+.+..+++.+.+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G-~-il~~~~~~~~~~~p~~g~--~e~dp~~~~~~~~~~i~~~~~ 66 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNG-K-KIGSSQKEFPQYFPKSGW--VEHNANEIWNSVQSVIAGAFI 66 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTS-C-EEEEEEEECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCceEEEEECCCC-C-EEEEEEEecCccCCCCCc--EEECHHHHHHHHHHHHHHHHH
Confidence 46889999999999999997432 2 221100001 113443 235788877777777766543
No 39
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=34.33 E-value=46 Score=35.53 Aligned_cols=56 Identities=14% Similarity=0.177 Sum_probs=36.8
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCccccccceeecCCCCcccCCCcchHHHHHHHHHHHH
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFA 139 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a 139 (536)
.+|.+.||.|+|++|..||....++ .+. .... -.||- ...+|+...+.+..+++.+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~-i~~--~~~~-~~~g~--~e~d~~~~~~~i~~~l~~~ 59 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE-LVR--FGQA-KHPNG--TSVDPSYWWSAFQEAAEQA 59 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC-EEE--EEEE-ECCSS--SEECTHHHHHHHHHHHHHT
T ss_pred CcEEEEEEeccccEEEEEEECCCCe-EEE--EEEE-eCCCC--ceECHHHHHHHHHHHHHhc
Confidence 4688999999999999999743333 221 1111 12542 2347888888888887754
No 40
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=34.06 E-value=42 Score=36.29 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=18.6
Q ss_pred ceEEEEEEcCCcceEEEEEEE
Q 009360 78 VKYGVLLDGGSTGTRIHVFSY 98 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~ 98 (536)
.+|.+.||.|+|++|+.++..
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 468899999999999999986
No 41
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=33.82 E-value=35 Score=34.31 Aligned_cols=20 Identities=15% Similarity=0.295 Sum_probs=17.1
Q ss_pred CCceEEEeeCCceeEEEeec
Q 009360 220 SETTGIIELGGASVQVTFVS 239 (536)
Q Consensus 220 ~~t~G~lDlGGaStQItf~~ 239 (536)
..++.++|+|||.|.|+...
T Consensus 189 ~~~vlVvDIGgGTtDv~vi~ 208 (346)
T 2fsj_A 189 PGYGVVIDVGSRTTDVLTIN 208 (346)
T ss_dssp SSEEEEEEECSSCEEEEEEE
T ss_pred CCcEEEEECCCCcEEEEEEE
Confidence 35679999999999998765
No 42
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=32.83 E-value=57 Score=34.49 Aligned_cols=60 Identities=15% Similarity=0.158 Sum_probs=37.0
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCcccccccee---ecCCCCcccCCCcchHHHHHHHHHHHHHHh
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSM---RLNPGLSSYAVNPTNAGDSLKDLLDFAKRK 142 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~---kv~pGLss~~~~p~~a~~~l~~ll~~a~~~ 142 (536)
+|.+.||.|+|++|+.++..+. + .+....... .-.||- ...+|+...+.+..+++.+.+.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~G-~-il~~~~~~~~~~~p~~g~--~e~d~~~~~~~~~~~i~~~~~~ 68 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQKG-E-IAGVAQREFKQYFPQSGW--VEHDANEIWTSVLAVMTEVINE 68 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTTS-C-EEEEEEEECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEEeCccceEEEEEcCCC-C-EEEEEEeecccccCCCCc--EEECHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999997532 2 221100001 113443 2457888777777777766554
No 43
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=32.42 E-value=51 Score=35.20 Aligned_cols=60 Identities=20% Similarity=0.207 Sum_probs=37.1
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCcccccccee---ecCCCCcccCCCcchHHHHHHHHHHHHHHh
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSM---RLNPGLSSYAVNPTNAGDSLKDLLDFAKRK 142 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~---kv~pGLss~~~~p~~a~~~l~~ll~~a~~~ 142 (536)
+|.+.||.|+|++|+.++..+. + .+....... .-.||- ...+|+...+.+..+++.+.+.
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G-~-il~~~~~~~~~~~p~~g~--~e~dp~~~~~~i~~~i~~~~~~ 88 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQ-K-IAGVGQKEFKQHFPKSGW--VEHDPEEIWQTVVSTVKEAIEK 88 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTS-C-EEEEEEEECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEeCCcceEEEEECCCC-C-EEEEEEEecccccCCCCc--EEECHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999997432 2 221100011 113442 2457888777777777776544
No 44
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=32.05 E-value=1.4e+02 Score=30.96 Aligned_cols=109 Identities=13% Similarity=0.024 Sum_probs=53.9
Q ss_pred HHHHHHHHHHH-HhCCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHHHHH
Q 009360 130 DSLKDLLDFAK-RKVPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAWIVA 208 (536)
Q Consensus 130 ~~l~~ll~~a~-~~IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~Wv~v 208 (536)
+.++.+++.+- +.+... ..+.||.+--... .+..+++++.+.+-+ ++++ +. +-++ +|++.+
T Consensus 103 d~~e~iw~~~~~~~L~v~-~~~~pvlltep~~---~~~~~re~~~ei~FE---~~~~--p~--v~l~---~~~vla---- 164 (427)
T 3dwl_A 103 DHMERFWQQSLFKYLRCE-PEDHYFLLTEPPL---NPPENRENTAEIMFE---SFNC--AG--LYIA---VQAVLA---- 164 (427)
T ss_dssp HHHHHHHHHHHHTTSCCC-GGGCEEEEEECTT---CCHHHHHHHHHHHTT---TTCC--SE--EEEE---EHHHHH----
T ss_pred HHHHHHHHHHHhHhhCCC-CcCCcEEEEcCCC---CCHHHHHHHHHHHHH---hccC--ce--eeec---chHHHH----
Confidence 45566666543 222211 1234776544332 355667766554432 2333 22 3333 344433
Q ss_pred HHhhccCC--CCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCe
Q 009360 209 NYALGTLG--GDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNV 256 (536)
Q Consensus 209 Nyllg~l~--~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~ 256 (536)
-|..|.-. .+...|.-+||+|++.|+|+-..+...-.....+++++|.
T Consensus 165 ~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~ 214 (427)
T 3dwl_A 165 LAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGR 214 (427)
T ss_dssp HHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHH
T ss_pred HHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHH
Confidence 34444200 0012355589999999999877554332333445555554
No 45
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=31.92 E-value=51 Score=35.04 Aligned_cols=59 Identities=14% Similarity=0.010 Sum_probs=37.0
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCccccc---cceeecCCCCcccCCCcchHHHHHHHHHHHHH
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFD---LGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAK 140 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~---~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~ 140 (536)
.+|.+.||.|+|++|+.++..+ ++ .+... .....-.||-. ..+|+...+.+..+++.+.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~-G~-il~~~~~~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~ 65 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRD-GG-LHFQRSIALETYGDGNGPV--EQDAGDWYDAVQRIASSWW 65 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTT-SC-EEEEEEEECCCBSTTSSCC--EECHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCCceEEEEECCC-CC-EEEEEEeecceecCCCCCE--EECHHHHHHHHHHHHHHHH
Confidence 3588999999999999999743 22 22110 01111234432 3478887777777777665
No 46
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=30.28 E-value=1.4e+02 Score=33.08 Aligned_cols=111 Identities=16% Similarity=0.269 Sum_probs=62.0
Q ss_pred cchHHHHHHHHHHHHHH--hC--CCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCccc
Q 009360 125 PTNAGDSLKDLLDFAKR--KV--PPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDE 200 (536)
Q Consensus 125 p~~a~~~l~~ll~~a~~--~I--P~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eE 200 (536)
.+...+.++.+++++-. .+ ..+.....||.+.-... .+..+++++.+.+-+. ++| +. +-++ ++
T Consensus 192 ~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPpl---np~~~REkm~EIlFE~---fgv--pa--vyl~---~q 258 (655)
T 4am6_A 192 LAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDI---FKKSHVETFIRVLLTE---LQF--QA--VAII---QE 258 (655)
T ss_dssp HHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTT---CCHHHHHHHHHHHHHT---SCC--SE--EEEE---EH
T ss_pred ccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCC---CCHHHHHHHHHHHHhh---cCC--Ce--eeec---cH
Confidence 34446777888887754 33 22212345777655543 3566777776665442 233 32 4443 35
Q ss_pred chhHHHHHHHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecCee
Q 009360 201 GVYAWIVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGNVT 257 (536)
Q Consensus 201 g~y~Wv~vNyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g~~ 257 (536)
++.+- |..|. ..+.-+||+|++.|+|+-..+...-......++++|..
T Consensus 259 avlAl----yasGl-----~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~d 306 (655)
T 4am6_A 259 SLATC----YGAGI-----STSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDD 306 (655)
T ss_dssp HHHHH----HHSCC-----SSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHH
T ss_pred HHHHH----HhCCC-----CCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHH
Confidence 54433 44441 13456899999999998775543333344556666543
No 47
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=27.83 E-value=2.5e+02 Score=29.84 Aligned_cols=104 Identities=19% Similarity=0.224 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHh---CCCCCCCCceEEEEeechhcccChhhHHHHHHHHHHhhcccCccccCCceEEcCCcccchhHH
Q 009360 129 GDSLKDLLDFAKRK---VPPAFWADTEIRLMATAGLRLVDVVVQDKILDSCRRVLRVSGFRFADDWATVITGSDEGVYAW 205 (536)
Q Consensus 129 ~~~l~~ll~~a~~~---IP~~~~~~Tpv~l~ATAGmRlL~~~~~~~il~~v~~~l~~~~F~f~~~~~~VIsG~eEg~y~W 205 (536)
.+.+..+++++-.. |+.+.....||.|.-..- .+..+++++.+.+-+. ++| +. +-++ .+++.+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~---~~~~~re~~~eilFE~---f~~--pa--~~~~---~~~vla- 239 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDI---YNKQHVKELVNMILMK---MGF--SG--IVVH---QESVCA- 239 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSS---CCHHHHHHHHHHHHHT---TCC--SE--EEEE---EHHHHH-
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCC---CCHHHHHHHHHHHHHh---cCC--Ce--EEee---chHHHH-
Confidence 45677777777542 444445556777665442 4556777766655443 233 22 3333 244433
Q ss_pred HHHHHhhccCCCCCCCceEEEeeCCceeEEEeecCCCCCccceeeEEecC
Q 009360 206 IVANYALGTLGGDPSETTGIIELGGASVQVTFVSDEPLPQEFSRTLKFGN 255 (536)
Q Consensus 206 v~vNyllg~l~~~~~~t~G~lDlGGaStQItf~~~~~~~~~~~~~~~l~g 255 (536)
-|..|. .|.-+||+|-+.|.|+=+-+...-.....++.+||
T Consensus 240 ---~ya~G~------~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG 280 (593)
T 4fo0_A 240 ---TYGSGL------SSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGG 280 (593)
T ss_dssp ---HHHHTC------SEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCH
T ss_pred ---HHHCCC------CceEEEEeCCCceeeeeeECCEEehhheEEecccH
Confidence 455552 35568999999999998766544334444444444
No 48
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=27.78 E-value=73 Score=33.66 Aligned_cols=59 Identities=15% Similarity=0.259 Sum_probs=35.1
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCccccccceee---cCCCCcccCCCcchHHHHHHHHHHHHH
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMR---LNPGLSSYAVNPTNAGDSLKDLLDFAK 140 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~k---v~pGLss~~~~p~~a~~~l~~ll~~a~ 140 (536)
.+|.+.||.|+|++|+.|+.-+ ++ .+........ -.||- ...+|+...+.+..+++.+.
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~-g~-i~~~~~~~~~~~~~~~g~--~e~d~~~~~~~i~~~i~~~~ 64 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEE-LN-IVHSNNLNHEQKCLKPGW--YEHDPIEIMTNLYNLMNEGI 64 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETT-CC-EEEEEEEECCCBCCSTTC--CEECHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCcceEEEEECCC-CC-EEEEEEEeeeeecCCCCc--EEECHHHHHHHHHHHHHHHH
Confidence 3588999999999999999743 22 2211000011 12342 23478877777777766553
No 49
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=27.61 E-value=93 Score=32.73 Aligned_cols=60 Identities=17% Similarity=0.243 Sum_probs=35.5
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCccccc---cceeecCCCCcccCCCcchHHHHHHHHHHHHHHh
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFD---LGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRK 142 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~---~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~~~ 142 (536)
+|.+.||.|+|++|+.++..+ ++ .+... .....-.||- ...+|+...+.+..+++.+.+.
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~-g~-i~~~~~~~~~~~~p~~g~--~e~d~~~~~~~i~~~i~~~~~~ 64 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLE-GR-PVAVAKREFRQLYPKPGW--VEHDPLEIWETTLWAAREVLRR 64 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTT-SC-EEEEEEEECCEECSSTTC--CEECHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeeCCcceEEEEECCC-CC-EEEEEEEeeceecCCCCc--EeeCHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999642 22 22110 0001112442 2347888777777777766543
No 50
>2yvc_D Neprilysin; protein-peptide complex, cell adhesion; 3.20A {Mus musculus}
Probab=27.50 E-value=23 Score=21.93 Aligned_cols=24 Identities=25% Similarity=0.188 Sum_probs=14.8
Q ss_pred ccccCCCccccccCCCCCCCCCCCCCCCCCCCC
Q 009360 9 RINSNMDPIKLHTRPLTRSTNLFSRNPKPTKSN 41 (536)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 41 (536)
|..+|||- . ..++|.|+.+.+||.
T Consensus 2 rsesqmdi-----t----dinapkpkkk~rws~ 25 (26)
T 2yvc_D 2 RSESQMDI-----T----DINAPKPKKKQRXXX 25 (26)
T ss_pred cccccccc-----c----cccCCCcchhhcccc
Confidence 55678864 1 134567777777764
No 51
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=26.91 E-value=1.6e+02 Score=28.50 Aligned_cols=75 Identities=20% Similarity=0.228 Sum_probs=41.6
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCccccccceeecCCCCcccCCCcchHHHHHHHHHHHHHHhCCCCCCCC--ceEEEE
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYAVNPTNAGDSLKDLLDFAKRKVPPAFWAD--TEIRLM 156 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~kv~pGLss~~~~p~~a~~~l~~ll~~a~~~IP~~~~~~--Tpv~l~ 156 (536)
+|.+.||.|.|.+|+-++.... + .+ ...+..+ .....+++.+.+.+..+++.+.+..+...... .. .-.
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G-~-il----~~~~~~~--~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~-igi 81 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDG-T-PL----AMAEGGA--SALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACA-IGL 81 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTC-C-EE----EEEEESC--CCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEE-EEE
T ss_pred CEEEEEEcCccceEEEEEcCCC-C-EE----EEEeCCC--CCcccCHHHHHHHHHHHHHHHHHhcCCChhhhccce-EEE
Confidence 4889999999999999986432 2 22 1122222 11124566677777777776655432211111 12 345
Q ss_pred eechhc
Q 009360 157 ATAGLR 162 (536)
Q Consensus 157 ATAGmR 162 (536)
+.+|.-
T Consensus 82 g~pG~v 87 (305)
T 1zc6_A 82 GLSGVH 87 (305)
T ss_dssp EESCCC
T ss_pred EecCCC
Confidence 677763
No 52
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=25.31 E-value=92 Score=32.62 Aligned_cols=62 Identities=16% Similarity=0.156 Sum_probs=36.5
Q ss_pred ceEEEEEEcCCcceEEEEEEEeCCCCcccc-ccceeecCCCCc----ccCCCcchHHHHHHHHHHHHHH
Q 009360 78 VKYGVLLDGGSTGTRIHVFSYDTETNHFDF-DLGSMRLNPGLS----SYAVNPTNAGDSLKDLLDFAKR 141 (536)
Q Consensus 78 ~~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~-~~~~~kv~pGLs----s~~~~p~~a~~~l~~ll~~a~~ 141 (536)
.+|.+.||.|+|++|..++..+. + .+.. .....+..|+.. ....+|+...+.+..+++.+..
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~g-~-~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~ 69 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYER-E-CRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCA 69 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEEG-G-GTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCceEEEEEecC-c-cceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHh
Confidence 45778999999999999998653 1 1110 000011112211 1234777777888888877644
No 53
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=25.10 E-value=87 Score=33.00 Aligned_cols=59 Identities=22% Similarity=0.275 Sum_probs=35.2
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCcccccccee---ecCCCCcccCCCcchHHHHHHHHHHHHHH
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSM---RLNPGLSSYAVNPTNAGDSLKDLLDFAKR 141 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~---kv~pGLss~~~~p~~a~~~l~~ll~~a~~ 141 (536)
+|.+.||.|+|++|..++.-+ ++ .+....... .-.||- ...+|+...+.+..+++.+.+
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~-g~-~~~~~~~~~~~~~p~~g~--~e~d~~~~~~~~~~~i~~~~~ 64 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRE-SN-IHGIGQYEFPQHYPRPGW--VEHNPEEIWDAQLRAIKDAIQ 64 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTT-CC-EEEEEEEECCCBCCSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecCCchhEEEEECCC-CC-EEEEEEeccceecCCCCc--EEECHHHHHHHHHHHHHHHHH
Confidence 477999999999999999642 22 221100000 112342 234788777777777766544
No 54
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=22.85 E-value=46 Score=35.63 Aligned_cols=21 Identities=5% Similarity=0.006 Sum_probs=18.7
Q ss_pred CceEEEEEEcCCcceEEEEEE
Q 009360 77 SVKYGVLLDGGSTGTRIHVFS 97 (536)
Q Consensus 77 ~~~y~iVIDaGSsgtRl~Vy~ 97 (536)
+.+|.+.||.|+|++|..||.
T Consensus 8 ~~~~~lgID~GTts~Ka~l~d 28 (538)
T 4bc3_A 8 PRRCCLGWDFSTQQVKVVAVD 28 (538)
T ss_dssp -CCEEEEEEECSSEEEEEEEE
T ss_pred CCCEEEEEEEcCcCEEEEEEC
Confidence 457999999999999999997
No 55
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=22.57 E-value=1.2e+02 Score=31.89 Aligned_cols=60 Identities=18% Similarity=0.310 Sum_probs=36.0
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCccccccceee---cCCCCcccCCCcchHHHHHHHHHHHHHHh
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMR---LNPGLSSYAVNPTNAGDSLKDLLDFAKRK 142 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~k---v~pGLss~~~~p~~a~~~l~~ll~~a~~~ 142 (536)
+|.+.||.|+|++|+.++..+ ++ .+........ -.||- ...+|+...+.+..+++.+.+.
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~-G~-i~~~~~~~~~~~~p~~g~--~e~d~~~~~~~i~~~i~~~~~~ 64 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHS-GE-IYSTGQLEHDQIFPRAGW--VEHNPEQIWNNVREVVGLALTR 64 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTT-SC-EEEEEEEECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCcceEEEEECCC-CC-EEEEEEEecceecCCCCc--eeECHHHHHHHHHHHHHHHHHH
Confidence 377899999999999999743 22 2211000011 12332 2347888777777777766544
No 56
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=22.24 E-value=67 Score=35.50 Aligned_cols=27 Identities=19% Similarity=0.324 Sum_probs=22.5
Q ss_pred CCceEEEEEEcCCcceEEEEEEEeCCC
Q 009360 76 SSVKYGVLLDGGSTGTRIHVFSYDTET 102 (536)
Q Consensus 76 ~~~~y~iVIDaGSsgtRl~Vy~~~~~~ 102 (536)
....||+.||.|+|+.+.+++....++
T Consensus 203 ~~~~~GlAvDiGTTtv~~~LvdL~tG~ 229 (631)
T 3zyy_X 203 SQRVFGLAIDIGTTTVVVQLVDLVSGK 229 (631)
T ss_dssp CCCCEEEEEEECSSEEEEEEEETTTCC
T ss_pred CCCceEEEEEecccceeEEEEECCCCC
Confidence 346799999999999999998876644
No 57
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=21.39 E-value=3.1e+02 Score=26.70 Aligned_cols=90 Identities=12% Similarity=0.071 Sum_probs=46.2
Q ss_pred eEEEEEEcCCcceEEEEEEEeCCCCccccccceeecCCCCcccC-CCcchHHHHHHHHHHHHHHhCCCCCC-CCceEEEE
Q 009360 79 KYGVLLDGGSTGTRIHVFSYDTETNHFDFDLGSMRLNPGLSSYA-VNPTNAGDSLKDLLDFAKRKVPPAFW-ADTEIRLM 156 (536)
Q Consensus 79 ~y~iVIDaGSsgtRl~Vy~~~~~~~~~~~~~~~~kv~pGLss~~-~~p~~a~~~l~~ll~~a~~~IP~~~~-~~Tpv~l~ 156 (536)
.|.+.||+|.|++|+-++.... + .+ ...+..+ .... .+++.+.+.+..+++.+.+....... +..- .-.
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~~g-~-i~----~~~~~~~--~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~g-igi 76 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSEDG-K-IL----AEADGLS--TNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRS-LGL 76 (347)
T ss_dssp CEEEEEEECTTCEEEEEEETTS-C-EE----EEEEECC--CCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSE-EEE
T ss_pred eEEEEEEcCccceEEEEEeCCC-C-EE----EEEeCCC--CCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeE-EEE
Confidence 3889999999999999986432 2 22 1122211 1111 25666667777777665443211111 1222 345
Q ss_pred eechhcccChhhHHHHHHHHHHh
Q 009360 157 ATAGLRLVDVVVQDKILDSCRRV 179 (536)
Q Consensus 157 ATAGmRlL~~~~~~~il~~v~~~ 179 (536)
+.+|.-. .++...+-+.+++.
T Consensus 77 ~~pG~vd--~~~~~~l~~~l~~~ 97 (347)
T 2ch5_A 77 SLSGGDQ--EDAGRILIEELRDR 97 (347)
T ss_dssp EETTTTC--HHHHHHHHHHHHHH
T ss_pred eccCCCc--hHHHHHHHHHHHHh
Confidence 6777633 23233333445544
Done!