BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009371
(536 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25519|HFLX_ECOLI GTPase HflX OS=Escherichia coli (strain K12) GN=hflX PE=1 SV=3
Length = 426
Score = 298 bits (762), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 241/398 (60%), Gaps = 18/398 (4%)
Query: 148 ESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDEL 207
E L+E L +AG+ + +P+P+ ++G GK EI A+ A G V+FD L
Sbjct: 25 EDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHAL 84
Query: 208 SAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQL---------PRLTKMWTH 258
S Q RNLE+ + RV DRT LILDIF QRA THE LQ+ RL + WTH
Sbjct: 85 SPAQERNLERLC--ECRVIDRTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTH 142
Query: 259 LERQAGG-QVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSL 317
LERQ GG ++G GE Q+E D+R+LR +I ++ LE V K R+Q R R+ VP VSL
Sbjct: 143 LERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSL 202
Query: 318 VGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTT 377
VGYTNAGKSTL NR+T A V A D+LFATLDPT RR+ + + GE +L DTVGFI+ LP
Sbjct: 203 VGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHD 262
Query: 378 LVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMIWNKVDKV 437
LVAAF+ATL+E +++LL+HV+D + ++ IEAV+ VL E+D IP L++ NK+D +
Sbjct: 263 LVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDML 322
Query: 438 CDPQ-KVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALVPFDKGELLST 496
D + ++ + + + + V +SA +G G+ + A+ E+L + +P +G L S
Sbjct: 323 EDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSR 382
Query: 497 IHQVGMVERTEYTENGTLVKAHVPLRFARLLTPMRQMC 534
+Q+ +E+ E+G+ V L+ + R++C
Sbjct: 383 FYQLQAIEKEWMEEDGS-----VSLQVRMPIVDWRRLC 415
>sp|D9R4W7|HFLX_CLOSW GTPase HflX OS=Clostridium saccharolyticum (strain ATCC 35040 / DSM
2544 / NRCC 2533 / WM1) GN=hflX PE=3 SV=1
Length = 423
Score = 281 bits (719), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 164/382 (42%), Positives = 231/382 (60%), Gaps = 14/382 (3%)
Query: 149 SLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDELS 208
SL EL +L TAG + V Q +P TY+G GK+ EIK I L ++ DDELS
Sbjct: 30 SLDELEELVKTAGAVAVDKVIQNRERIHPGTYLGKGKIEEIKDRIWELDATGIVCDDELS 89
Query: 209 AGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQL---------PRLTKMWTHL 259
QLRNLE A D +V DRT +ILDIF RA T E +Q+ RL + + L
Sbjct: 90 PAQLRNLEGAL--DTKVMDRTMVILDIFASRAVTREGKIQVELAQLRYRSARLVGLRSSL 147
Query: 260 ER-QAGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSLV 318
R G +G GEK++E+D+R++ +IG+LK ELE V++HR+ R +R VP ++V
Sbjct: 148 SRLGGGIGTRGPGEKKLEMDRRLIHDRIGMLKAELEDVKRHREVVRQQRDKNHVPAAAIV 207
Query: 319 GYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTTL 378
GYTNAGKSTLLNRLT A +LAED+LFATLDPTTR + + G + LLTDTVGFI+KLP L
Sbjct: 208 GYTNAGKSTLLNRLTDAGILAEDKLFATLDPTTRNLSLPGGQQILLTDTVGFIRKLPHHL 267
Query: 379 VAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMIWNKVDKVC 438
+ AF++TLEE S +++HVVD S+P + Q+ V + L EL + + ++NK+D
Sbjct: 268 IEAFKSTLEEAKYSDIILHVVDCSNPQMDMQMYVVYETLRELGICDKIMITVFNKIDAA- 326
Query: 439 DPQKVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALVPFDKGELLSTIH 498
V L + V ISA +G GLDE + ++ L++ V++E + + + + I
Sbjct: 327 -DAGVILRDVSSDHQVRISAKTGEGLDELINLLETILRNQKVYLERIYSYKEAGKIQLIR 385
Query: 499 QVGMVERTEYTENGTLVKAHVP 520
+ G + + EY E+G V A+VP
Sbjct: 386 KYGQLLKEEYQEDGIFVNAYVP 407
>sp|D3FTV4|HFLX_BACPE GTPase HflX OS=Bacillus pseudofirmus (strain OF4) GN=hflX PE=3 SV=1
Length = 423
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/379 (43%), Positives = 225/379 (59%), Gaps = 22/379 (5%)
Query: 146 IEESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDD 205
E+S+ EL LA TA VVG+ QK TY+G GKV E+ I + VIF+D
Sbjct: 26 FEQSIAELESLAKTAKGKVVGTITQKREKVESSTYVGKGKVQELVHLIEETEADLVIFND 85
Query: 206 ELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---------LPRLTKMW 256
EL A Q+RNL G + V DRT LILDIF RA + E LQ LPRL+
Sbjct: 86 ELQASQMRNLHAECG--IAVIDRTQLILDIFASRAKSREGKLQVELAQLKYLLPRLSGQG 143
Query: 257 THLERQAGGQVKGMG-EKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVV 315
L RQ GG E Q+E D+R +R ++ ++++LE+V HR +YR +R +
Sbjct: 144 LALSRQGGGIGTRGPGETQLETDRRHIRRRMNEIERQLEAVVNHRVRYREKRKKNAAIQL 203
Query: 316 SLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLP 375
+LVGYTNAGKSTLLNRLT A L ED+LFATLDPTTR++ + +G L++DTVGFIQ LP
Sbjct: 204 ALVGYTNAGKSTLLNRLTKADTLEEDQLFATLDPTTRQLHLPSGFSVLMSDTVGFIQDLP 263
Query: 376 TTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMIWNKVD 435
TTLVA+FR+TLEE+ E+ LL+HVVD SHP EQ V K++ EL+ SIP+L+I+NK D
Sbjct: 264 TTLVASFRSTLEELKEADLLLHVVDCSHPDYEQHERTVIKLIEELEAHSIPQLLIYNKAD 323
Query: 436 KVCD---PQKVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALVPFDKGE 492
+ D P K D + +SA + L +++ LK M+ +++ D+G
Sbjct: 324 QKTDVFIPTHTK-------DSIIMSAYNEEDLLALKVKIEQALKGMMMPYRSIIKADEGH 376
Query: 493 LLSTIHQVGMVERTEYTEN 511
+L+ Q M+ ++ E+
Sbjct: 377 ILAAARQETMIHTQQFDES 395
>sp|A0L4B2|HFLX_MAGSM GTPase HflX OS=Magnetococcus sp. (strain MC-1) GN=hflX PE=3 SV=1
Length = 432
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 232/389 (59%), Gaps = 15/389 (3%)
Query: 150 LKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDELSA 209
L EL L+ TAGL V + L P TY GSG+V E+ I ++ + + L+
Sbjct: 30 LDELVHLSTTAGLEVHATQLLSLQKAVPATYFGSGQVEELARRIEEDEIDVAVVNHALTP 89
Query: 210 GQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQL---------PRLTKMWTHLE 260
Q RNLEK + +V DRT LIL+IF RA T E +Q+ RL + WTHLE
Sbjct: 90 IQQRNLEKKL--NAKVVDRTGLILEIFAARARTREGIMQVELASLMYQQSRLVRSWTHLE 147
Query: 261 RQAGGQVKGMG--EKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSLV 318
RQ GG G E+QIEVD+R++R +I LKK+LE V + R R R +P+ V+LV
Sbjct: 148 RQRGGVGLRGGPGERQIEVDRRLIRERIHKLKKQLEEVERTRALQRQPRQDIPLFTVALV 207
Query: 319 GYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTTL 378
GYTNAGKSTL N LT A VLAED+LFATLDPT R V + +GG LL+DTVGFI++LP L
Sbjct: 208 GYTNAGKSTLFNLLTRAGVLAEDKLFATLDPTMRAVDLPDGGRILLSDTVGFIRQLPHQL 267
Query: 379 VAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMIWNKVDKVC 438
VAAF+ATLEE+ + +L+HVVD+S P E+ +E+V+ VL EL+V L ++NK+D++
Sbjct: 268 VAAFKATLEEVMSADMLLHVVDLSDPEWERYVESVNGVLQELEVQHTRTLTVYNKIDRL- 326
Query: 439 DPQKVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALVPFDKGELLSTIH 498
+ + + R D + +SA +G G++ S ++ + +M+ E ++P G L+ H
Sbjct: 327 ESRGILERELARGDTIGVSAQTGEGVEPLLSELRRAVGRAMLRYEVILPVSDGRWLAKFH 386
Query: 499 -QVGMVERTEYTENGTLVKAHVPLRFARL 526
+ +VE E + TL+ P RL
Sbjct: 387 AEASVVEVREGEDFTTLIVELAPAVLGRL 415
>sp|A6H294|HFLX_FLAPJ GTPase HflX OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511) GN=hflX PE=3 SV=1
Length = 413
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 212/319 (66%), Gaps = 17/319 (5%)
Query: 127 EKSYLVGVERKGGAEYLFVIEESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKV 186
EK+ +VG+ + +E ++E L EL L TAG VV QK+ PNP+T++G+GK+
Sbjct: 10 EKTIIVGIVTQNQSEE--KLKEYLDELEFLTFTAGGEVVKRFSQKMERPNPKTFLGTGKI 67
Query: 187 AEIKSAIHALGVETVIFDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAA 246
EI + G+ T++FDDEL+ Q +N+ K D ++ DRT LILDIF QRA T A
Sbjct: 68 EEINLYVLENGISTIVFDDELTPSQQKNISKII--DCKILDRTHLILDIFAQRAETSYAR 125
Query: 247 LQ---------LPRLTKMWTHLERQAGG-QVKGMGEKQIEVDKRILRTQIGVLKKELESV 296
Q LPRL+ MWTHLERQ GG ++G GE +IE D+RI+R +I +LK++++ +
Sbjct: 126 TQVELAQCIYLLPRLSGMWTHLERQKGGIGMRGPGETEIETDRRIVRDRIALLKEKIKII 185
Query: 297 RKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQM 356
K + R R ++ V+LVGYTN GKSTL+N + + V E++LFATLD T R+V +
Sbjct: 186 DKQQATQRGNRGAMVR--VALVGYTNVGKSTLMNAVGKSDVFVENKLFATLDTTVRKVVI 243
Query: 357 KNGGEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKV 416
KN FLL+DTVGFI+KLPT LV +F++TL+E+ E+ LL+HVVDISH E I+AV+K+
Sbjct: 244 KNLP-FLLSDTVGFIRKLPTQLVDSFKSTLDEVREADLLLHVVDISHQDFEDHIDAVNKI 302
Query: 417 LSELDVSSIPKLMIWNKVD 435
L ++ + P +M++NK+D
Sbjct: 303 LLDIKSADKPTIMVFNKID 321
>sp|Q8RAS5|HFLX_THETN GTPase HflX OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=hflX PE=3 SV=1
Length = 428
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/383 (42%), Positives = 234/383 (61%), Gaps = 18/383 (4%)
Query: 147 EESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDE 206
EE+L EL +LA TAG V+G QK N YIG GK+ E+K + + VI +DE
Sbjct: 40 EETLNELKELAVTAGAEVIGILTQKKKGINKAHYIGKGKLEELKMFVENQQADLVIVNDE 99
Query: 207 LSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---------LPRLTKMWT 257
L+ Q++NLE A G V++ DRT LILDIF +RA + E LQ LPRL +
Sbjct: 100 LTGTQIKNLEDALG--VKIVDRTNLILDIFAKRARSKEGMLQVELAQLKYRLPRLVGLGG 157
Query: 258 HLER-QAGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVS 316
L R G +G GE ++EVD+R +R +I ++++LE + KHR R RR +PVV+
Sbjct: 158 QLSRLGGGIGTRGPGETKLEVDRRHIRNRIKAIEEKLEELEKHRNLQRQRRKKNQIPVVA 217
Query: 317 LVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPT 376
+VGYTNAGKSTLLN LTGA ED+LFATLDPT R++ + +G E +LTDTVGFI+KLP
Sbjct: 218 IVGYTNAGKSTLLNALTGADAYVEDKLFATLDPTARKLVLPSGREVILTDTVGFIRKLPH 277
Query: 377 TLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMIWNKVDK 436
LV AF++TLEE+ + LL+HV+D++ P +++I+ V+KVLS+L P++ ++NK+D
Sbjct: 278 DLVEAFKSTLEEVKYADLLLHVIDVTSPDMDEKIKVVEKVLSDLGAIETPRINVYNKIDL 337
Query: 437 VCDPQKVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALVPFDKGELLST 496
+ ++ R+ + ISA + GLD A++ +L V L P++K +
Sbjct: 338 L----EIVPSGNNRD--IYISAKNKIGLDRLLEAIERELFKETEVVSFLFPYEKTREYNY 391
Query: 497 IHQVGMVERTEYTENGTLVKAHV 519
+ + G V ++ E G VKA V
Sbjct: 392 LKERGKVIEEDFDEKGISVKAEV 414
>sp|Q9Z873|HFLX_CHLPN GTPase HflX OS=Chlamydia pneumoniae GN=hflX PE=1 SV=1
Length = 472
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 161/404 (39%), Positives = 235/404 (58%), Gaps = 23/404 (5%)
Query: 145 VIEESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHAL-GVETVIF 203
V+EE L EL LAD+ G+ V+ + L +P+ TYI GK+ EI+ + + T+I
Sbjct: 49 VVEEHLDELISLADSCGISVLETRSWILKTPSASTYINVGKLEEIEEILKEFPSIGTLII 108
Query: 204 DDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---------LPRLTK 254
D+E++ Q RNLEK G + V DRT LIL+IF+ RA T EA +Q LPRL +
Sbjct: 109 DEEITPSQQRNLEKRLG--LVVLDRTELILEIFSSRALTAEANIQVQLAQARYLLPRLKR 166
Query: 255 MWTHLERQAGGQ-----VKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVS 309
+W HL RQ G VKG GEKQIE+D+R++R +I L +L++V K R + R +
Sbjct: 167 LWGHLSRQKSGGGSGGFVKGEGEKQIELDRRMVRERIHKLSAQLKAVIKQRAERRKVKSR 226
Query: 310 VPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVG 369
+P +L+GYTN+GKSTLLN LT A ED+LFATLDP TR+ + G LLTDTVG
Sbjct: 227 RGIPTFALIGYTNSGKSTLLNLLTAADTYVEDKLFATLDPKTRKCVLPGGRHVLLTDTVG 286
Query: 370 FIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLM 429
FI+KLP TLVAAF++TLE +L+HVVD SHPLA + ++ + EL + +
Sbjct: 287 FIRKLPHTLVAAFKSTLEAAFHEDVLLHVVDASHPLALEHVQTTYDLFQELKIEKPRIIT 346
Query: 430 IWNKVDKVCD---PQKVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALV 486
+ NKVD++ P K++L + V ISA +G G+ S + E +++ + V
Sbjct: 347 VLNKVDRLPQGSIPMKLRLLSPLP---VLISAKTGEGIQNLLSLMTEIIQEKSLHVTLNF 403
Query: 487 PFDKGELLSTIHQVGMVERTEYTENGTLVKAHVPLRFARLLTPM 530
P+ + + + G+V + Y E+ +V+A++P + P
Sbjct: 404 PYTEYGKFTELCDAGVVASSRYQEDFLVVEAYLPKELQKKFRPF 447
>sp|Q0I442|HFLX_HAES1 GTPase HflX OS=Haemophilus somnus (strain 129Pt) GN=hflX PE=3 SV=1
Length = 458
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 223/379 (58%), Gaps = 13/379 (3%)
Query: 148 ESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDEL 207
E L+E L +A + ++ ++P + ++G GK EI A+ L + V+ + L
Sbjct: 50 EDLQEFQLLVKSANVDILSIITTSRSTPQAKYFVGQGKAEEIAQAVEQLNADIVLVNHSL 109
Query: 208 SAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQL---------PRLTKMWTH 258
+ Q RNLE RV DRT LILDIF QRA +HE LQ+ RL + T
Sbjct: 110 TPAQARNLESI--CQCRVVDRTGLILDIFAQRARSHEGKLQVELAQLRHLATRLVRRKTG 167
Query: 259 LERQAGG-QVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSL 317
L++Q G ++G GE Q+E D+R+++ +I L+ LE V K R Q R R +P +SL
Sbjct: 168 LDQQKGAVGLRGPGETQLETDRRLIKVRITQLQNRLEKVAKQRNQNRQTRRKADIPTISL 227
Query: 318 VGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTT 377
VGYTNAGKSTL N LT A V D+LFATLDPT +R+ +++ G +L DTVGFI++LP
Sbjct: 228 VGYTNAGKSTLFNVLTQANVYVADQLFATLDPTLKRLPIQDVGNCVLADTVGFIRELPHD 287
Query: 378 LVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMIWNKVDKV 437
LV+AF++TL+E +E+SLL+HV+D++ + + V++VLSE+ + + L+++NK+D+V
Sbjct: 288 LVSAFKSTLQETTEASLLLHVIDVADSRKLENMLTVNEVLSEIKANQVTTLLVYNKIDQV 347
Query: 438 CDPQ-KVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALVPFDKGELLST 496
+ Q ++ + + + V +SA GLD A+++KL ++ +E + G++
Sbjct: 348 ENIQPHIEFDEENQPIAVYLSAQLNQGLDLLVEAIRQKLSHEILHLEINLAAQYGKIRHC 407
Query: 497 IHQVGMVERTEYTENGTLV 515
+Q+ V + + E G +
Sbjct: 408 FYQLNCVRQEKINEQGEFL 426
>sp|C1F407|HFLX_ACIC5 GTPase HflX OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM
11244 / JCM 7670) GN=hflX PE=3 SV=1
Length = 432
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 232/411 (56%), Gaps = 20/411 (4%)
Query: 133 GVERKGGAEYLFVIEESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSA 192
G KGG++ F E + E +L +AG + Q+ + T IGSGKV E+++
Sbjct: 24 GAAEKGGSDDAF--ESGVAEFRELVLSAGAEIAAEVQQRRGRADAATLIGSGKVEEVRAV 81
Query: 193 IHALGVETVIFDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---- 248
+ + ++F L+ QLRNLE A G RV DRT LILDIF + A T E LQ
Sbjct: 82 AESSHADVIVFGQNLTPTQLRNLENALPG--RVIDRTQLILDIFARHARTREGMLQVELA 139
Query: 249 -----LPRLTKMWTHLER-QAGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQ 302
LPRLT + R G +G GE Q+E D+R ++ +I LK ELESVR+ R Q
Sbjct: 140 QLEYMLPRLTGRGREMSRLGGGIGTRGPGETQLETDRRRIQRRISTLKGELESVRRIRSQ 199
Query: 303 YRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEF 362
R RR +VPVP V+LVGYTNAGKSTL N LTGA VLA R+FATLDP R + + + +
Sbjct: 200 QRQRREAVPVPTVALVGYTNAGKSTLFNALTGAGVLASSRMFATLDPKLRAIVLPSRRKV 259
Query: 363 LLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDV 422
LL+DTVGFI+ LP TL+++FRATLEE+ ++ +L+HV D S E+ V VL+EL
Sbjct: 260 LLSDTVGFIRDLPPTLISSFRATLEEVQKAEVLLHVQDCSSATREEHRAEVKHVLAELGA 319
Query: 423 SSIPKLMIWNKVDKVCDPQKVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLK-DSMVW 481
P++ + NKVD + ++ L + + ISA +G GL++ + E L+ D MV
Sbjct: 320 GDKPQIEVLNKVDLLSPEEQEGLRSGHGRP-MAISARTGMGLEDLLERIDEALQADPMVE 378
Query: 482 VEALVPFDKGELLSTIHQVGMVERTEYTENGTLVKAHVPL----RFARLLT 528
VP +GE+++ I G++ E+ N +K P RF R T
Sbjct: 379 ARLRVPQSEGEVIAAIEAGGVIRNREFEGNLVFLKVSAPASLIGRFRRFAT 429
>sp|P94478|HFLX_BACSU GTPase HflX OS=Bacillus subtilis (strain 168) GN=hflX PE=3 SV=2
Length = 420
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/402 (42%), Positives = 235/402 (58%), Gaps = 19/402 (4%)
Query: 120 NGREVFQEKSYLVGVERKGGAEYLFVIEESLKELAQLADTAGLMVVGSTHQKLNSPNPRT 179
N +E QEK+ LVG + + F E S++ELA L TA V+ S QK N + T
Sbjct: 2 NEQETIQEKAILVGCQLPHITDEHF--ENSMEELASLTKTADGKVLTSVTQKRNRADAAT 59
Query: 180 YIGSGKVAEIKSAIHALGVETVIFDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQR 239
YIG GKV E+K+ + L + +IF+DELS QL++L A +V++ DRT LILDIF +R
Sbjct: 60 YIGKGKVEELKALVEELEADLLIFNDELSPSQLKSLATAI--EVKMIDRTQLILDIFAKR 117
Query: 240 AATHEAALQ---------LPRLTKMWTHLERQAGGQVKGMG-EKQIEVDKRILRTQIGVL 289
A T E LQ LPRLT +L RQ GG E ++E D+R +R +I +
Sbjct: 118 ARTREGKLQIELAQLQYALPRLTGQGINLSRQGGGIGARGPGETKLETDRRHIRNRIHEI 177
Query: 290 KKELESVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDP 349
+L +V +HR +YR RR V ++LVGYTNAGKST NRLT A ED LFATLDP
Sbjct: 178 NTQLSTVIRHRSRYRERRKKNGVLQIALVGYTNAGKSTWFNRLTSADSYEEDLLFATLDP 237
Query: 350 TTRRVQMKNGGEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQ 409
TR++ + +G LL+DTVGFIQ LPTTL+AAFR+TLEE+ E+ L++H++D S+
Sbjct: 238 MTRKMVLPSGYSVLLSDTVGFIQDLPTTLIAAFRSTLEEVKEADLILHLIDSSNEDYAGH 297
Query: 410 IEAVDKVLSELDVSSIPKLMIWNKVDKVCDPQKVKLEAQKREDVVCISALSGNGLDEFCS 469
+ V ++L EL+ IP L +NK D+ P + + D + +SA + F
Sbjct: 298 EKTVLRLLEELEADDIPMLTAYNKRDQKL-PDFIPTAGR---DHIMVSAKFEDDAAAFKE 353
Query: 470 AVQEKLKDSMVW-VEALVPFDKGELLSTIHQVGMVERTEYTE 510
A+Q L+ ++ EA VP +G+LLS I MV+R + E
Sbjct: 354 AIQRYLRQELLTSFEAHVPASEGKLLSRIKSETMVDRFYFNE 395
>sp|E0RQS7|HFLX_SPITD GTPase HflX OS=Spirochaeta thermophila (strain ATCC 49972 / DSM
6192 / RI 19.B1) GN=hflX PE=3 SV=1
Length = 408
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 225/405 (55%), Gaps = 26/405 (6%)
Query: 126 QEKSYLVGVERKGGAEYLFVIEESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGK 185
QE + V RK G E SL EL+ L + G + L +P + G G+
Sbjct: 6 QEAPRCILVGRKTGREE----TSSLPELSLLVEELGYIPETILSFPLRTPERKFLFGPGQ 61
Query: 186 VAEIKSAIHALGVETVIFDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEA 245
+ G+E V+FD++L+ Q RN E RV DRT +I++IF++ A T +A
Sbjct: 62 AEVVAREARMRGIELVVFDEDLTPAQQRNWEHLVKS--RVMDRTEVIIEIFSRHARTKQA 119
Query: 246 ALQ---------LPRLTKMWTHLERQAGGQ--VKGMGEKQIEVDKRILRTQIGVLKKELE 294
LQ LPRL W+HL+RQ GG +G GE+QIE+D+R++ +++ +++E+E
Sbjct: 120 QLQTEKARLEYLLPRLRGAWSHLDRQRGGARGTRGEGERQIELDRRMILSRLARIRREME 179
Query: 295 SVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRV 354
++ +H+ R+RR+ +P VSLVGYTNAGKS+L RLTG V +DR F TLD TTR
Sbjct: 180 AIERHQTTTRSRRLEAGIPRVSLVGYTNAGKSSLFTRLTGQAVRIQDRPFVTLDTTTRTC 239
Query: 355 QMKNGGEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVD 414
+ G +++DTVGFIQ LP TLV AF ATLEE+ ++ LL+ VVD+S P + +
Sbjct: 240 LIPGWGRVVVSDTVGFIQHLPHTLVDAFHATLEEVRDAHLLLEVVDLSSPNLLLHLSTTE 299
Query: 415 KVLSELDVSSIPKLMIWNKVDKVCDPQKVKLEAQKREDVVCISALSGNGLDEFCSAVQEK 474
+VL+E+ IP++ ++NK D+ P + + E + +SA +G G++ S + +
Sbjct: 300 EVLTEIGAHHIPRIRVYNKADR-SSPHPLLPPSDHPE--ILVSAKTGEGIEGLLSLIVRE 356
Query: 475 LKDSMVWVEALVPFDKGELLSTIHQV---GMVERTEYTENGTLVK 516
++ +P+ + L H+V ++ EYT+ G V+
Sbjct: 357 MERHYPIETLELPYHR---LGESHEVLSRAVIIHQEYTDVGLFVR 398
>sp|Q3AFV0|HFLX_CARHZ GTPase HflX OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=hflX PE=3 SV=1
Length = 414
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 153/388 (39%), Positives = 226/388 (58%), Gaps = 19/388 (4%)
Query: 151 KELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDELSAG 210
+E L T G+ V Q+L P P TY G GKV EI + + + +L+
Sbjct: 21 EEFLALLKTRGIEAVDIISQRLEHPVPATYFGYGKVQEIGELLKKHNLNLLAVGGDLTPT 80
Query: 211 QLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---------LPRLTKMWTHLER 261
Q +NLE+ +V V DRT +IL+IF + A THE +Q LPR+T + L R
Sbjct: 81 QAKNLEEIL--EVTVVDRTQIILEIFAEHAHTHEGKIQVELARLMYNLPRITGLGRVLSR 138
Query: 262 -QAGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSLVGY 320
G +G GE ++EV +R +R +I L++EL+ + ++RK R+RR+ VP+V+LVGY
Sbjct: 139 LGGGIGTRGPGETKLEVLRRTIRKRIAELRRELKEIEQNRKVKRSRRLEAGVPIVALVGY 198
Query: 321 TNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTTLVA 380
TNAGKSTLLN LTGA VLAED+LFATLDPT R++ + G + LL DTVGFI+ +P +
Sbjct: 199 TNAGKSTLLNALTGAGVLAEDKLFATLDPTVRKLTLPGGQKLLLIDTVGFIENMPPLIKE 258
Query: 381 AFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMIWNKVDKVCDP 440
AF++TLE + E+ L++HVVD ++P E+Q V+K+L+E+ V +P + ++NKVD + +P
Sbjct: 259 AFKSTLEVVHEAELILHVVDGANPYREEQEAVVEKILTEMKV-RVPVITVYNKVDLLPEP 317
Query: 441 QKVKLEAQKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALVPFDKGELLSTIHQV 500
L KR V ISA +G ++ ++E L V V+A++PF + + + +
Sbjct: 318 V---LFLGKR--AVAISARTGYNMELLLKLIEENLFWQEVTVKAVLPFAQAFKIGDLKEN 372
Query: 501 GMVERTEYTENGTLVKAHVPL-RFARLL 527
+ EY G V P R AR L
Sbjct: 373 LKLINLEYLPEGIEVTVAGPRERIARYL 400
>sp|Q73J26|HFLX_TREDE GTPase HflX OS=Treponema denticola (strain ATCC 35405 / CIP 103919
/ DSM 14222) GN=hflX PE=3 SV=1
Length = 391
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 217/378 (57%), Gaps = 36/378 (9%)
Query: 122 REVFQEKSYLVGVERKGGAEYLFVIEESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYI 181
R QEKS A+ L IEE KEL L +T L + S ++ NP T +
Sbjct: 30 RSTLQEKS----------AKALKEIEE--KELKSLVETIFLKPLSSLRFRIAKENPATLV 77
Query: 182 GSGKVAEIKSAIHALGVETVIFDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAA 241
GSG++ +I AI G + V+F+ +S RNLE A + V DR+ +I+ IF RA
Sbjct: 78 GSGQLEKIAQAIEEEGADLVVFNSAVSPRIQRNLEAAL--NTCVIDRSEVIIQIFADRAQ 135
Query: 242 THEAALQ---------LPRLTKMWTHLERQAGGQ------VKGMGEKQIEVDKRILRTQI 286
T EA LQ +PRLT+ WT L +Q GG +G GEK++E+D+R L+T+I
Sbjct: 136 TREAVLQAELARLEYSMPRLTRRWTSLAQQRGGAKGTRGASRGAGEKKLELDRRRLKTEI 195
Query: 287 GVLKKELESVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFAT 346
LKKE+E VR R + R R++ + ++VGYTNAGKS+LL +L+GA V ED+LFAT
Sbjct: 196 TKLKKEVERVRLQRSEQRKTRLNGDKKIGAIVGYTNAGKSSLLKKLSGAEVFTEDKLFAT 255
Query: 347 LDPTTRRVQMKNGG---EFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISH 403
LD TR+V ++ G + LLTDTVGF+ LP L+ AFR+TLEE + + L+ V D +H
Sbjct: 256 LDAETRKVFLQTGEKNIQILLTDTVGFVSNLPHQLIDAFRSTLEEAALADFLIIVCDAAH 315
Query: 404 PLAEQQIEAVDKVLSELDVSSIPKLMIWNKVDKVCDPQKVKLEAQKREDVVCISALSGNG 463
P + +E KVL EL S P ++ NK+D + D ++ ++ + V IS +G G
Sbjct: 316 PAMPECLEVTKKVLDELSCSDKPSIIAINKMDDIFDEAQLLNLKERYPEAVEISVTTGQG 375
Query: 464 LDEFCSAVQEKLKDSMVW 481
L+ +++K+ D +++
Sbjct: 376 LE----GLKKKITDIIIF 389
>sp|B2UPE7|HFLX_AKKM8 GTPase HflX OS=Akkermansia muciniphila (strain ATCC BAA-835)
GN=hflX PE=3 SV=1
Length = 437
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 24/396 (6%)
Query: 150 LKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDELSA 209
L EL L G+ + G K + + G+GK E+K + V+FD+ LS
Sbjct: 33 LDELEDLVSNLGIGIAGKHLIKSRDMHAKFLCGTGKAQEVKQLALDCRADCVVFDNMLSP 92
Query: 210 GQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---------LPRLTKMWTHLE 260
Q R E+ D V DR +ILDIF +RA T EA LQ LPR+ +MW HL+
Sbjct: 93 SQQREWERLV--DECVIDREEVILDIFARRARTREATLQVELARMQYSLPRMARMWNHLD 150
Query: 261 RQAGGQVKGMGE---------KQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVP 311
RQ GG G G KQIEVD+R+ R +I +++EL V + R R R
Sbjct: 151 RQGGGSGGGKGGGGAARGEGEKQIEVDRRLARARIEAIQRELVLVTRQRATQRKERERQA 210
Query: 312 VPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFI 371
V ++VGYTNAGKS+LL+ ++G+ V+A D LFATLD TTR++++ +G LLTDTVGFI
Sbjct: 211 VATAAIVGYTNAGKSSLLSLVSGSEVMARDMLFATLDTTTRKIELPHGQPLLLTDTVGFI 270
Query: 372 QKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMIW 431
+ LP LV AF++TLEE + L+ VVD S P A + E +VL+EL P +++
Sbjct: 271 RNLPHRLVEAFKSTLEEAVLADFLIQVVDASDPEAVRHYETTLEVLNELGAGDKPMIVVL 330
Query: 432 NKVDKVCDPQKVKLEA----QKREDVVCISALSGNGLDEFCSAVQEKLKDSMVWVEALVP 487
NKVD V + ++ LE VV +S GNG + +A E L+ + L+P
Sbjct: 331 NKVDLVPEERRGALETLLAPHFSGRVVPMSVKEGNGEGDLLNACVEMLESRVRRARFLIP 390
Query: 488 FDKGELLSTIHQVGMVERTEYTENGTLVKAHVPLRF 523
+ + +L++ +H G V TEY E GTL++A +P+ F
Sbjct: 391 YTRSDLVAAMHSEGKVFSTEYVEEGTLLEAVLPVAF 426
>sp|Q04PB3|HFLX_LEPBJ GTPase HflX OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain JB197) GN=hflX PE=3 SV=2
Length = 462
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 222/393 (56%), Gaps = 49/393 (12%)
Query: 126 QEKSYLVGV--ERKGGAEYLFVIEESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGS 183
+ +++LVGV ER G S++EL +L TA + VV + Q+ N +P T +G
Sbjct: 62 ENRAFLVGVYPERSVGRHPSL----SMEELKELCRTAEVHVVDTFIQRKNRLDPSTVLGK 117
Query: 184 GKVAEIKSAIHALGVETVIFDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATH 243
GK+ EI VE ++FD EL+ Q + + D++V DRT LILDIF + A +
Sbjct: 118 GKLEEIILKAIQKHVELLVFDLELTPSQAKKISDI--ADIKVIDRTQLILDIFARNAKSR 175
Query: 244 EAALQLP---------RLTKMWTHLER-QAGGQVKGMGEKQIEVDKRILRTQIGVLKKEL 293
+ LQ+ RLT++ ++ R G +G GE ++E+ KR + +I L+ EL
Sbjct: 176 DGKLQVELAQLKYLKGRLTELDDNMSRLTGGIGGRGPGETKLEIGKRRVEERITRLEVEL 235
Query: 294 ESVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRR 353
+S++K R+ R +R +P V +VGYTNAGKST LN LT + +L+E++LFATLDPTTRR
Sbjct: 236 KSLKKRREINRRQRKRNELPAVGIVGYTNAGKSTFLNALTNSEILSENKLFATLDPTTRR 295
Query: 354 VQMKNGGEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAV 413
++ E +++DTVGFI LP L AF+ATLEE+ +S LLVHVVD+S+P + Q+EAV
Sbjct: 296 IRFPEEREIIISDTVGFIHDLPPELSNAFKATLEELGDSDLLVHVVDVSNPDYKLQMEAV 355
Query: 414 DKVLSELDVSSIPKLMIWNKVDKVCDPQKVKLEAQK------------------------ 449
+K+L EL++S IP + ++NK+D + + K+E+
Sbjct: 356 EKILEELELSHIPMIQVFNKIDNLEKFKTWKIESDSNGYKTFSHPSINHGPGLEAIADLK 415
Query: 450 -------REDVVCISALSGNGLDEFCSAVQEKL 475
D V +SA G GL F ++EK+
Sbjct: 416 EELGIDVHSDTVLVSAYQGWGLKAFLDLLEEKI 448
>sp|A9H253|HFLX_GLUDA GTPase HflX OS=Gluconacetobacter diazotrophicus (strain ATCC 49037
/ DSM 5601 / PAl5) GN=hflX PE=3 SV=2
Length = 450
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 50/424 (11%)
Query: 147 EESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGV-------- 198
E SL EL +L T G VVG+ QK +GSGK+AE+ + GV
Sbjct: 26 EASLAELGRLVKTLGYAVVGTVSQKREGTGAALLLGSGKLAELAALTGGTGVVTSMAPPP 85
Query: 199 ----------------------------ETVIFDDELSAGQLRNLEKAFGGDVRVCDRTA 230
E VI D ELS Q+RNLE+A G +V DRT
Sbjct: 86 KSKARQRFEGAAEGAAPPEPDPDAARRPEFVIVDHELSPSQIRNLERATGA--QVLDRTG 143
Query: 231 LILDIFNQRAATHEAALQ--LPRLTKMWTHLERQAGGQVKGMG----EKQIEVDKRILRT 284
+I++IF++ A T EA LQ + RL + L +GG + G E + +D+R +R
Sbjct: 144 VIVEIFHRHANTREARLQVEMARLKYVAPRLRESSGGGGRQQGPGAGESTLALDRRKIRD 203
Query: 285 QIGVLKKELESVRKHRKQYRN-RRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRL 343
++ LK +L++V++ Q R+ RR + V+LVGYTNAGKS+L+ LTG+ VL ED+L
Sbjct: 204 RLAELKTQLDAVQRDGDQRRSARRDQL---RVALVGYTNAGKSSLMRALTGSQVLVEDKL 260
Query: 344 FATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISH 403
FATLD T R +Q + L++DTVGFI++LP LVA+FR+TL E E+SLL+ VVD S
Sbjct: 261 FATLDTTVRILQPETRPRILVSDTVGFIKQLPHDLVASFRSTLAEALEASLLLFVVDASD 320
Query: 404 PLAEQQIEAVDKVLSELDVSSIPKLMIWNKVDKVCDPQKVKLEAQKREDVVCISALSGNG 463
P E Q+E VL E+ ++P ++ NK+D++ DP K D + +SA +
Sbjct: 321 PTYESQLEVTRGVLREIGADAVPSRLVLNKMDRL-DPAARAALRDKHPDAIMLSAHAPGD 379
Query: 464 LDEFCSAVQEKLKDSMVWVEALVPFDKGELLSTIHQVGMVERTEYTENGTLVKAH-VPLR 522
+ + + MV ++P+ K L+ I++ V ++ E G ++K +P
Sbjct: 380 VSALRDTLIAFFEAEMVEDTLVLPYAKQGLIGEIYESARVLSEDHDETGRVLKVRALPAA 439
Query: 523 FARL 526
RL
Sbjct: 440 ITRL 443
>sp|Q5JGB4|HFLX_PYRKO GTPase HflX OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=hflX PE=3 SV=1
Length = 442
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 207/396 (52%), Gaps = 31/396 (7%)
Query: 149 SLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDELS 208
S E +L +AG V+ Q +PR IG GK+ E+K + L + VIF + L+
Sbjct: 16 SRAEFEELLRSAGYEVLAIVEQN-REEHPRYNIGPGKLEELKELVKELKPDKVIFANRLT 74
Query: 209 AGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---------LPRLTKMWTHL 259
Q NL K + + DR L+L+IF +RA + EA LQ +P + + +
Sbjct: 75 PSQAYNLWKEL--RIEIMDRWQLVLEIFEKRAHSKEAKLQVELASLQYEIPLVKEAIRRI 132
Query: 260 ERQAGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSLVG 319
KGMGE Q + + +R ++G ++ ELE V+ R+ R +R + +V+L G
Sbjct: 133 RLGDRAGFKGMGEYQTQQYLKHIRYRMGKIRDELERVKADREVKRKKRENAGFVLVALAG 192
Query: 320 YTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTTLV 379
YTNAGKSTLLN L V A++++F TLD TTRR ++ L TDTVGFI LP +V
Sbjct: 193 YTNAGKSTLLNALADENVEAKNQMFTTLDTTTRRFRL-GTKRILATDTVGFIDGLPPFIV 251
Query: 380 AAFRATLEEISESSLLVHVVDISHPLAE--QQIEAVDKVLSELDVSSIPKLMIWNKVDKV 437
AF +TLEEI ++ +++ V+D S P E ++ A +VL EL P ++ NK+D +
Sbjct: 252 EAFHSTLEEIVKADIVLLVLDSSEPWGEIRRKFLASLQVLRELKALEKPIIVALNKIDLI 311
Query: 438 CDP---QKVKL---EAQKR----EDVVCISALSGNGLDEFCSAVQE---KL-KDSMVWVE 483
+ +KV+L A++R EDVV ISA G L+E A+ KL K +
Sbjct: 312 EEADAEEKVRLIWELARERGISLEDVVKISAREGR-LEELMDALNRVVLKLPKYGAFRII 370
Query: 484 ALVPFDKGELLSTIHQVGMVERTEYTENGTLVKAHV 519
P +++ I+ VG V EY E T + A+V
Sbjct: 371 VKEPEKVPAVMALINSVGEVLSVEYGEK-TRIDAYV 405
>sp|Q6DCC6|GTPB6_XENLA Putative GTP-binding protein 6 OS=Xenopus laevis GN=gtpbp6 PE=2
SV=1
Length = 527
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 192/377 (50%), Gaps = 48/377 (12%)
Query: 139 GAEYLFVIEESLKELA----------QLADTAGLM-------VVGSTHQKLNSPNPRTYI 181
GA +F++ +K A Q+A+ A L+ VV + SP+ +
Sbjct: 104 GAHRVFIVHPDVKWGAKKDQLSTADLQVAEAAALVHSLPNWSVVNTLIMSTKSPDSKLIF 163
Query: 182 GSGKVAEIKSAIHALGVETVIFDD--ELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQR 239
G G + I T +F + LS+ + +E+A+G V+V DR ++L+IF
Sbjct: 164 GKGNFQTLTDVIKGHPQITAVFLNVERLSSLTEKEMEEAWG--VKVFDRYTVVLNIFRFN 221
Query: 240 AATHEAALQ-----LPRLTKMW----THLERQAGGQ--VKGMGEKQIEVDKRILRTQIGV 288
A T EA LQ LP L H+++Q GG + G GE +EV +R+L+ +
Sbjct: 222 AHTKEAKLQIALAELPLLRSSLKNETAHMDQQGGGSRYIMGSGETFLEVQQRLLKEREIK 281
Query: 289 LKKELESVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVL-AEDRLFATL 347
+K LE V+K R R +R P++S++GYTN+GK+TL+ LTG L D+LFATL
Sbjct: 282 IKYALEKVKKKRNLLRTQRRRREFPIISILGYTNSGKTTLIKALTGDEGLQPRDQLFATL 341
Query: 348 DPTTRRVQMKNGGEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAE 407
D T+ + + DT+GF+ +LP L+ +F ATLE++ S LL+HV DISHP
Sbjct: 342 DVTSHAGLLPCHMPVIYVDTIGFLSQLPHNLIESFSATLEDVVHSDLLIHVRDISHPETT 401
Query: 408 QQIEAVDKVLSELDVSSIPKLM------IWNKVDKVCDPQKVKLEAQKREDVVCISALSG 461
+Q +V VL L +P+ + + NK+D + P+ + + V+ +SAL G
Sbjct: 402 KQKASVLSVLKNL---GLPQQLLDTMIEVQNKIDLIDMPENTE------DSVLSVSALHG 452
Query: 462 NGLDEFCSAVQEKLKDS 478
+GL++ V+ + S
Sbjct: 453 HGLEDLKQQVETAVMKS 469
>sp|A1RY30|HFLX_THEPD GTPase HflX OS=Thermofilum pendens (strain Hrk 5) GN=hflX PE=3 SV=1
Length = 424
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 178/352 (50%), Gaps = 21/352 (5%)
Query: 150 LKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDELSA 209
L EL +L + AG V G QK +P+ IG GKV E+K + V+F ++L
Sbjct: 24 LDELRKLVEAAGYAVAGELLQKSRYEDPKYNIGRGKVLELKRLVEEKKPLKVVFLNDLKP 83
Query: 210 GQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQLP--------RLTKMWTHLER 261
Q NL K G V V DR LIL+IF +RA + E+ LQ+ K + +L +
Sbjct: 84 NQAYNLSKETG--VEVIDRYELILEIFAKRAGSRESKLQIELAKLKRELSFAKEYINLAK 141
Query: 262 QAGGQVKGM---GEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSLV 318
+ G++ G G+ ++ + +I +++EL +RK +++ RRV + V+L
Sbjct: 142 R--GELHGFLGGGKYAVDAYYAYVSMRISKIEEELRKIRKMKEERIARRVEAGLYTVALT 199
Query: 319 GYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTTL 378
GYT AGK+TL N LTG + + FATL +RR +G L+TDT+GFI LP L
Sbjct: 200 GYTGAGKTTLFNVLTGENGYIDGKPFATLSTLSRRTYF-HGFPVLVTDTIGFIDDLPDAL 258
Query: 379 VAAFRATLEEISESSLLVHVVDISHPLAE--QQIEAVDKVLSELDVSSIPKLMIWNKVDK 436
V AF TL E + +++ V+D+S AE +++ A +VL L V L++ NK+DK
Sbjct: 259 VDAFYTTLRETLAADVILLVLDVSDTPAEIRRKLTASMEVLLNLGVPPTRILLVGNKIDK 318
Query: 437 VCDPQKVKLEAQKRED---VVCISALSGNGLDEFCSAVQEKLKDSMVWVEAL 485
V + + E + ISA G+ E AV E L + + AL
Sbjct: 319 VSSAELEERERLLEDSGLRYTLISAARRIGIHELTQAVVEMLPEKVSATLAL 370
>sp|O43824|GTPB6_HUMAN Putative GTP-binding protein 6 OS=Homo sapiens GN=GTPBP6 PE=2 SV=3
Length = 516
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 161 GLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIF--DDELSAGQLRNLEKA 218
G VV + +P+ + G G + I T +F + ++A + LE A
Sbjct: 133 GWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDVTCVFLNVERMAAPTKKELEAA 192
Query: 219 FGGDVRVCDRTALILDIFNQRAATHEAALQ-----LP----RLTKMWTHLERQAGGQ-VK 268
+G V V DR ++L IF A T EA LQ +P L + HL R G + +
Sbjct: 193 WG--VEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIM 250
Query: 269 GMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTL 328
G GE +++ +R+LR + ++K L+ +RK R R +R PV+S+VGYTN GK+TL
Sbjct: 251 GSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTL 310
Query: 329 LNRLTG-ATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPTTLVAAFRATLE 387
+ LTG A + D+LFATLD T + + L DT+GF+ +LP L+ +F ATLE
Sbjct: 311 IKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLE 370
Query: 388 EISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKL----MIWNKVDKVCDPQKV 443
+++ S L++HV D+SHP AE Q +V L L + + P L + NKVD V P
Sbjct: 371 DVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPA-PLLDSMVEVHNKVDLV--PGYS 427
Query: 444 KLEAQKREDVVCISALSGNGLDEF 467
E +VV +SAL G+GL E
Sbjct: 428 PTE----PNVVPVSALRGHGLQEL 447
>sp|Q58526|HFLX_METJA GTPase HflX OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=hflX PE=3
SV=1
Length = 402
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 200/368 (54%), Gaps = 33/368 (8%)
Query: 148 ESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDEL 207
E LKELA++ +V ++ +P+ IGSG V I I +E VI + L
Sbjct: 16 EELKELAEVLYNPVKTIV-----QIRKADPKYQIGSGLVERIAENIKEENIEIVIVGNIL 70
Query: 208 SAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQLPRLTKMWTHLER------ 261
+ Q NL K F V V D+ L+L IF + A T EA LQ+ RL ++ L R
Sbjct: 71 TPSQKYNLAKKFK--VEVIDKIELVLRIFYKHARTKEAQLQV-RLAELQYELPRAREKVR 127
Query: 262 --QAGGQ--VKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVSL 317
+ G Q G G+ ++E + ++ +I +K++LE +R+HR+ R R V L
Sbjct: 128 LAKMGEQPGFGGYGDYEVEKYYQKVKREIATIKRKLEKLREHRRVARKGRAKFDT--VGL 185
Query: 318 VGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQ-MKNGGEFLLTDTVGFIQKLPT 376
+GYTNAGK++LLN LTG +++++F TL TTR ++ +K + L+TDTVGFI LP
Sbjct: 186 IGYTNAGKTSLLNALTGENKESKNQVFTTLTTTTRAIKGIKR--KILVTDTVGFIDDLPP 243
Query: 377 TLVAAFRATLEEISESSLLVHVVDISHPLAE--QQIEAVDKVLSELDVSSIPKLMIWNKV 434
++ AF +T+EE ++S L++ VVD S + E ++++ ++LS+++ + P + ++NKV
Sbjct: 244 FMIEAFLSTIEESADSDLILIVVDASDDIEEIKRKLKVNHEILSKINCKA-PIITVFNKV 302
Query: 435 DKVCDPQKVK-LEAQKREDV--VCISALSGNGLDEFCSAVQEKLKDSMVWVEALVPFDKG 491
DK+ +K K LE R V + +SA +D + E L S+ +E D
Sbjct: 303 DKITKEKKRKILEELDRYIVNPIFVSAKYDINMDLLKEMIIEHLNLSIGTIET----DNP 358
Query: 492 ELLSTIHQ 499
L+S +++
Sbjct: 359 RLISYLYE 366
>sp|Q0WTB4|Y3725_ARATH GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis
thaliana GN=At3g49725 PE=2 SV=2
Length = 620
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 163/318 (51%), Gaps = 48/318 (15%)
Query: 163 MVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALG----VETVIFDDELSAGQLRNLEKA 218
+VV + ++ + P TY GSG V IK ++A V+ V + L+A Q RNLE+
Sbjct: 157 VVVQNPVRRSSKPRVDTYFGSGTVDNIKCHLNAEDSKEEVDAVFVNAILTAIQQRNLERI 216
Query: 219 FGGDVRVCDRTALILDIFNQRAATHEAALQL---------PRLTKMWTHLERQAGGQ--- 266
+ V DR LI++IFN A T EA LQ RL ++ R GQ
Sbjct: 217 WAKPV--LDRVGLIIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGE 274
Query: 267 ---VKGMG----------------EKQIEVDKRILRTQIGVLKKELESVRKHR---KQYR 304
V G E ++++ +R + + L +++ ++ R + R
Sbjct: 275 AEVVSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGR 334
Query: 305 NRRVSV---PVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGE 361
+RV + +++VGYTNAGKSTL++ LT + +RLFATLDPT + + +G
Sbjct: 335 KKRVGLEGESSGTIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNF 394
Query: 362 FLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELD 421
LL+DTVGFI LP LV AF++TLEE+ E+ LL+HVVD + P E+ V VL+++
Sbjct: 395 VLLSDTVGFISDLPIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIG 454
Query: 422 VSSIPKLM----IWNKVD 435
V KL +WNK+D
Sbjct: 455 VPE-EKLQNMIEVWNKID 471
>sp|A9A623|HFLX_NITMS GTPase HflX OS=Nitrosopumilus maritimus (strain SCM1) GN=hflX PE=3
SV=1
Length = 371
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 158/301 (52%), Gaps = 17/301 (5%)
Query: 147 EESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVIFDDE 206
E+ + E L D AG VV + QK P+ I G + ++ + + ++FD+
Sbjct: 12 EDVINEAKGLCDAAGFQVVHTIKQKF-LKRPKYGISGGILERLEEISEKIRPDVIVFDEV 70
Query: 207 LSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQLPRLTKMWTHLER----- 261
L Q NL A ++ DR ALIL+IF RA++ E+ LQ+ +L ++ + R
Sbjct: 71 LKPSQNYNLAAALHREI--LDREALILEIFESRASSAESKLQV-KLAQLRYEMARAKEKV 127
Query: 262 ---QAGGQVKGMGEKQIEVDKRI--LRTQIGVLKKELESVRKHRKQYRNRRVSVPVPVVS 316
G Q MG + EVD ++ ++ ++ +LE K R+ +R R + +S
Sbjct: 128 RLSSMGEQPGFMGIGKFEVDVYYNDIKHRMNTVRSKLEKAGKQRELHRQGRKRMGFKTIS 187
Query: 317 LVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKLPT 376
L GYT+AGK+TL N +TG T LF TL TTRRV + N FL++DTVGFI KLP
Sbjct: 188 LAGYTSAGKTTLFNMMTGETRDQSSELFTTLSTTTRRVSI-NQEPFLISDTVGFISKLPA 246
Query: 377 TLVAAFRATLEEISESSLLVHVVDISHPLAE--QQIEAVDKVLSELDVSSIPKLMIWNKV 434
++ AF++TLEE+ + +++ V+DI + E ++ + + LSEL V + NK
Sbjct: 247 YMIDAFKSTLEELGHTDIIIVVIDIGDSIFELKKKFSSCMRTLSELGVEKDRMVYALNKS 306
Query: 435 D 435
D
Sbjct: 307 D 307
>sp|Q980M3|HFLX_SULSO GTPase HflX OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM
1617 / JCM 11322 / P2) GN=hflX PE=1 SV=1
Length = 356
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 174/347 (50%), Gaps = 34/347 (9%)
Query: 143 LFVIEESLKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHALGVETVI 202
LFV +E +E L + A V S ++ SPN + YI K+ +IK+ + T+I
Sbjct: 6 LFVSKEFEEEAIALVEGANYKVT-SIYKLPKSPNVKFYIQYDKLQQIKNDEE---ISTLI 61
Query: 203 FDDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---------LPRLT 253
++L N+ + G V D+ L+L+IF A + EA +Q LP +
Sbjct: 62 IFEQLKPRHFINIRRELKGK-EVLDKILLLLEIFALHAGSKEAKMQIELARLKYELPIIK 120
Query: 254 KMWTH--LERQAGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVR--KHRKQYRNRRVS 309
+ +T + Q G G G +E + + +I L KELES++ K + N+R +
Sbjct: 121 ETYTKSKIGEQQGPL--GAGTYGVESTIKFYKRRINKLMKELESIKIFKEKSIESNKRNN 178
Query: 310 VPVPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVG 369
+P + +VGYTN+GK++L N LTG T + +LF T+ P + + N + +L DTVG
Sbjct: 179 IPS--IGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPI-NNRKIMLVDTVG 235
Query: 370 FIQKLPTTLVAAFRATLEEISESSLLVHVVD--ISHPLAEQQIEAVDKVLSELDVSSIPK 427
FI+ +P +V AF TL E S L+ V+D S L + +++ ++L E+ VS P
Sbjct: 236 FIRGIPPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPI 295
Query: 428 LMIWNKVDKVCDPQKVKL---EAQKRE------DVVCISALSGNGLD 465
L+ NK+DK+ KL E +E DV+ ISAL L+
Sbjct: 296 LVTLNKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLE 342
>sp|Q3U6U5|GTPB6_MOUSE Putative GTP-binding protein 6 OS=Mus musculus GN=Gtpbp6 PE=2 SV=1
Length = 514
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 171/354 (48%), Gaps = 20/354 (5%)
Query: 134 VERKGGAEYLFVIEESLKELAQLADT-AGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSA 192
V+R G + E + E A L G V + +P R G G ++
Sbjct: 94 VKRPAGKKPRSTAEWQVAEAAALVRALPGWSVASTLVVPSAAPGSRLVFGKGNFQDVTEK 153
Query: 193 IHALGVETVIF--DDELSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQLP 250
I T +F + ++ + LE A+G +RV DR L+L IF A T EA +QL
Sbjct: 154 IKGCQDITSVFLNVERMAPPTKKELESAWG--LRVFDRFTLVLHIFRCNARTREARMQLA 211
Query: 251 --RLTKMWTHLERQAGGQ---------VKGMGEKQIEVDKRILRTQIGVLKKELESVRKH 299
+ + + + +G Q + G GE E+ R LR + L++ LE +R
Sbjct: 212 LAEIPLLRSSVNTDSGQQDQQGWGSRYIMGSGESPTELRARALRDRELRLRRVLERLRDK 271
Query: 300 RKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNRLTGATVL-AEDRLFATLDPTTRRVQMKN 358
R+ R RV PVVS+VGYTN GK+TL+ LTG L D+ FATLD T + +
Sbjct: 272 RRLMRKERVRREFPVVSVVGYTNCGKTTLIQALTGEAALQPRDQPFATLDVTVHAGLLPS 331
Query: 359 GGEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLS 418
L DT+GF+ +LP L+ AF ATLE+++ S +LVHV D+SHP AE Q VLS
Sbjct: 332 RLRILYVDTIGFLSQLPHNLIHAFSATLEDVAYSDVLVHVTDVSHPDAELQKA---TVLS 388
Query: 419 ELDVSSIPKLMIWNKVDKVCDPQKVKLEAQKREDVVCISALSGNGLDEFCSAVQ 472
L +P ++ + ++ V + +SA+SG GLDE +A++
Sbjct: 389 TLRGLHLPPALLESALEVHSKVDLVPGYTPPCSGALAVSAISGRGLDELKAALE 442
>sp|A2BLW4|HFLX_HYPBU GTPase HflX OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
GN=hflX PE=3 SV=1
Length = 375
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 163/314 (51%), Gaps = 35/314 (11%)
Query: 150 LKELAQLADTAGLMVVGSTHQKLNSPNPRTYIGSGKVAEIKSAIHAL-GVET--VIFDDE 206
++E LA+TAG VV + + S + + K+ E+ +L G E +I D
Sbjct: 23 VREAYVLAETAGYRVVDVLYYRRVSSS--KLLSDAKLEELAEKAKSLVGNEYARIIVYDN 80
Query: 207 LSAGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQ---------LP------R 251
L + + KA G V DRT LIL+IF+ A + EA LQ LP R
Sbjct: 81 LKPREYFRIVKATG--VNTIDRTMLILEIFSLHAGSREAKLQIELARLRHELPLVREAIR 138
Query: 252 LTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYRNRRVSVP 311
L+K+ ++ G + G G I+ R + ++I +K+EL +R+ + R++R S
Sbjct: 139 LSKL-----KELPGFL-GPGGYAIDAYYRYMVSRIAKIKRELRELRRRHEIERSKRRSAG 192
Query: 312 VPVVSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFI 371
+P +++VGY +AGK++L N +TG F T+ P R + NG + DTVGFI
Sbjct: 193 LPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISF-NGLRTVFIDTVGFI 251
Query: 372 QKLPTTLVAAFRATLEEISESSLLVHVVDISHP---LAEQQIEAVDKVLSELDVSSIPKL 428
++P ++ AF +TLEE + + ++++VVD+S P +AE+ E + + L + V P +
Sbjct: 252 MRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGL-QTLRRIGVIDKPLI 310
Query: 429 MIWNKVDKVCDPQK 442
+ NK+D V PQ+
Sbjct: 311 IAANKIDLV--PQE 322
>sp|B8I179|OBG_CLOCE GTPase obg OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM
5812 / JCM 6584 / H10) GN=obg PE=3 SV=1
Length = 425
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V LVGY N GKST+L+ ++ A + F TL P VQ+++G F++ D G I+
Sbjct: 161 VGLVGYPNVGKSTILSMVSAAKPKIANYHFTTLVPNLGVVQIEHGKSFVIADIPGLIEGA 220
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELD-----VSSIPKLM 429
V L + + LLVHVVD+S +E D + SEL +S+ P+++
Sbjct: 221 HEG-VGLGHQFLRHVERTKLLVHVVDVSGVEGRDAVEDFDTINSELQKYNQVLSTRPQIV 279
Query: 430 IWNKVDKVCDPQKVKL---EAQKR-EDVVCISALSGNGLDEFCSAVQEKLK 476
NK+D + K E +KR V ISA + GL E AV E LK
Sbjct: 280 AANKMDIPGAEENYKAFKEELEKRGYKVFGISAATNKGLKELLYAVSETLK 330
>sp|B1I5V8|OBG_DESAP GTPase obg OS=Desulforudis audaxviator (strain MP104C) GN=obg PE=3
SV=1
Length = 425
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 13/164 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V LVG+ NAGKST++++++ A D F TL+P V++ G F+L D G I+
Sbjct: 161 VGLVGFPNAGKSTIISKVSAARPKIADYPFTTLEPHLGVVRVGEGESFVLADIPGLIEGA 220
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDIS-----HPLAEQQIEAVDKVLSELD--VSSIPK 427
R L + + +L+HVVD+S P+A+ EA+++ L+ D +++ P+
Sbjct: 221 HRGAGLGHR-FLRHVERTRVLIHVVDVSGREGRDPVAD--FEAINRELAAYDPRLAARPQ 277
Query: 428 LMIWNKVDKVC---DPQKVKLEAQKREDVVCISALSGNGLDEFC 468
L+ NK D + +++ A R +V ISAL+G GLD
Sbjct: 278 LVAANKTDLPGARDNARRLAEAAGGRYEVFEISALTGEGLDRLI 321
>sp|A6TQJ6|OBG_ALKMQ GTPase obg OS=Alkaliphilus metalliredigens (strain QYMF) GN=obg
PE=3 SV=1
Length = 427
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V LVG+ N GKSTLL+ +T A D F TL P V+ K G F+L D G I+
Sbjct: 161 VGLVGFPNVGKSTLLSVVTSAKPKIADYHFTTLTPNLGVVRTKRGDSFVLADIPGLIEGA 220
Query: 375 --PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPK 427
T L F L + + LL+HV+D++ +E +K+ EL +S+ P+
Sbjct: 221 HEGTGLGHEF---LRHVERTKLLIHVLDVAGIEGRDPLEDFEKINEELKLYNEKLSTRPQ 277
Query: 428 LMIWNKVDKVCDPQKVK----LEAQKREDVVCISALSGNGLDEFCSAVQEKLK 476
++ NK D + + + +K A+K +V +SA + GLDE V KLK
Sbjct: 278 VVAANKTDVMGENENLKKLTEALAEKGIEVFPVSAATKQGLDELLDYVSIKLK 330
>sp|Q2L062|OBG_BORA1 GTPase obg OS=Bordetella avium (strain 197N) GN=obg PE=3 SV=1
Length = 372
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 23/179 (12%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V L+G NAGKSTL++R++ A D F TL P V+ F++ D G I+
Sbjct: 162 VGLLGLPNAGKSTLISRISNARPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHP-----LAEQQIEAVDKVLSEL-----DVSS 424
+ L ++ + +L+H+VD+S P E +E ++ EL +++
Sbjct: 222 -SEGAGLGHLFLRHLARTRVLLHLVDVSSPDPDADPIESAVENARAIVEELRRYDPELAE 280
Query: 425 IPKLMIWNKVDKVCDPQKVKLEAQKR--------EDVVCISALSGNGLDEFCSAVQEKL 475
P+ ++ NK+D V DP V Q+R V CIS L+G G E A+Q+ L
Sbjct: 281 KPRWLVLNKLDMVPDPASV----QQRFCEAFGWTGPVFCISGLNGEGTQELIWALQDYL 335
>sp|Q18B27|OBG_CLOD6 GTPase obg OS=Clostridium difficile (strain 630) GN=obg PE=3 SV=1
Length = 425
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V L+G+ N GKST L+ +T A + F TL P VQ K G F+L D G I+
Sbjct: 161 VGLLGFPNVGKSTFLSVVTKAKPKIANYHFTTLTPNLGVVQTKFGDSFVLADIPGIIEG- 219
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPKLM 429
+ + L + + +L+H+VDIS IE DK+ EL +S P+++
Sbjct: 220 ASEGIGLGHEFLRHVERTKVLIHIVDISGLEGRDPIEDFDKINDELKLYNEKLSKRPQVV 279
Query: 430 IWNKVDKVCDP---QKVKLEAQKREDVVC-ISALSGNGLDEFCSAVQEKLKD 477
+ NK D + D +K K E + R V +SA + G+DE + V + LK+
Sbjct: 280 VANKFDILEDESKFEKFKSELEGRGYTVFKMSAATRQGIDEVIAYVSKMLKE 331
>sp|A9IFF9|OBG_BORPD GTPase obg OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 /
CCUG 43448) GN=obg PE=3 SV=1
Length = 378
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V L+G NAGKSTL++R++ A D F TL P V+ F++ D G I+
Sbjct: 162 VGLLGLPNAGKSTLISRISNARPKVADYPFTTLHPNLGVVRTSASRSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHP-----LAEQQIEAVDKVLSEL-----DVSS 424
+ L ++ + +L+H+VDIS P EQ + ++ EL +++
Sbjct: 222 -SEGAGLGHLFLRHLARTRVLLHLVDISSPDPDTDPIEQAVADARAIVEELRRYDPELAD 280
Query: 425 IPKLMIWNKVDKVCDP----QKVKLEAQKREDVVCISALSGNGLDEFCSAVQEKL 475
P+ ++ NK+D V DP Q+ + + V IS L+G+G E A+Q+ L
Sbjct: 281 KPRWLVLNKLDMVADPDAARQRFVEQFSWQGPVFVISGLNGDGTQELIWALQDYL 335
>sp|O67849|OBG_AQUAE GTPase obg OS=Aquifex aeolicus (strain VF5) GN=obg PE=3 SV=1
Length = 343
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V LVG+ NAGKSTLL+RLT A D F TL P +++ ++ D G I+
Sbjct: 163 VGLVGFPNAGKSTLLSRLTRAKPKIADYPFTTLSPNLGVMELDWERRLVIADIPGLIEDA 222
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSI-----PKLM 429
L I + L HV+D+S + ++A + + EL++ S P+++
Sbjct: 223 HKG-AGLGHEFLRHIERTKFLAHVIDVSDFREREPVQAFEAINRELELYSPKLAQKPQIV 281
Query: 430 IWNKVDKVCDPQKV----KLEAQKREDVVCISALSGNGLDEFCSAVQEKLKD 477
+ NK+D + D + K +K + +SAL+G G++E + +K ++
Sbjct: 282 VANKIDALSDRSLLSELEKYFKEKGYEFYAVSALTGEGIEELKEGLWKKYEE 333
>sp|A8MHK8|OBG_ALKOO GTPase obg OS=Alkaliphilus oremlandii (strain OhILAs) GN=obg PE=3
SV=1
Length = 430
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V LVG+ N GKSTLL+ +T A + F TL P V+ K G F+L D G I+
Sbjct: 161 VGLVGFPNVGKSTLLSVVTSAKPKIANYHFTTLTPNLGVVRTKFGDSFVLADIPGLIEGA 220
Query: 375 --PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELD-----VSSIPK 427
T L F L + + LL+HV+D++ +E +K+ EL ++ P+
Sbjct: 221 HEGTGLGHEF---LRHVERTKLLIHVLDVAGLEGRDPLEDFEKINQELHLYNEKLAEKPQ 277
Query: 428 LMIWNKVD-KVCDPQKVKLEAQKRE---DVVCISALSGNGLDEFCSAVQEKLKDSMVWVE 483
++ NK D + KL+A E +V ISA + GLDE S V ++LK+ + +E
Sbjct: 278 VVAANKTDIPGAEDNLEKLKAVLSERGIEVFPISAATSQGLDELLSYVSKRLKE-LEEIE 336
Query: 484 AL 485
AL
Sbjct: 337 AL 338
>sp|Q6MGS5|OBG_BDEBA GTPase obg OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM
50701 / NCIB 9529 / HD100) GN=obg PE=3 SV=2
Length = 343
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 19/172 (11%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V +VG+ NAGKSTL++R++ A D F TL P V+ + F++ D G ++
Sbjct: 160 VGIVGFPNAGKSTLISRISAARPKIADYPFTTLTPNLGVVKAGDYSSFVVADIPGLVKGA 219
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELD------------- 421
+ + L+ I + L +H+VD S +E + +EL
Sbjct: 220 HAGVGLGIQ-FLKHIERTRLFIHLVDASGMSGRDPLEDYTDINNELKMYDENNQDKEGFF 278
Query: 422 -VSSIPKLMIWNKVDKVCDPQKVKLEAQKRE----DVVCISALSGNGLDEFC 468
+S+ P+L++ NK+D + + Q KL+ Q +E + ISA++G + EF
Sbjct: 279 PLSTRPQLVVLNKIDTLSESQLTKLKKQFKEASGSEPFAISAVTGKNIKEFV 330
>sp|Q7VZX6|OBG_BORPE GTPase obg OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589
/ NCTC 13251) GN=obg PE=3 SV=1
Length = 377
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V L+G NAGKSTL++R++ A D F TL P V+ F++ D G I+
Sbjct: 162 VGLLGLPNAGKSTLISRISNARPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHP-----LAEQQIEAVDKVLSEL-----DVSS 424
+ L ++ + +L+H+VDIS P EQ + + ++ EL ++++
Sbjct: 222 -SEGAGLGHLFLRHLARTRVLLHLVDISSPDPEADPIEQAVVDANAIVEELRRYDPELAA 280
Query: 425 IPKLMIWNKVDKVCDPQKVKLEAQKR--------EDVVCISALSGNGLDEFCSAVQEKL 475
P+ ++ NK+D V D Q +AQ+R V IS L+G G + A+Q+ L
Sbjct: 281 KPRWLVLNKLDMVPDAQ----DAQQRFCAEFGWTGPVFAISGLNGEGTQDLIWALQDYL 335
>sp|Q7W1P2|OBG_BORPA GTPase obg OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587
/ NCTC 13253) GN=obg PE=3 SV=1
Length = 377
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V L+G NAGKSTL++R++ A D F TL P V+ F++ D G I+
Sbjct: 162 VGLLGLPNAGKSTLISRISNARPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHP-----LAEQQIEAVDKVLSEL-----DVSS 424
+ L ++ + +L+H+VDIS P EQ + + ++ EL ++++
Sbjct: 222 -SEGAGLGHLFLRHLARTRVLLHLVDISSPDPEADPIEQAVVDANAIVEELRRYDPELAA 280
Query: 425 IPKLMIWNKVDKVCDPQKVKLEAQKR--------EDVVCISALSGNGLDEFCSAVQEKL 475
P+ ++ NK+D V D Q +AQ+R V IS L+G G + A+Q+ L
Sbjct: 281 KPRWLVLNKLDMVPDAQ----DAQQRFCAEFGWTGPVFAISGLNGEGTQDLIWALQDYL 335
>sp|Q7WQL8|OBG_BORBR GTPase obg OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC
13252 / RB50) GN=obg PE=3 SV=1
Length = 377
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V L+G NAGKSTL++R++ A D F TL P V+ F++ D G I+
Sbjct: 162 VGLLGLPNAGKSTLISRISNARPKIADYPFTTLHPNLGVVRTSPSRSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHP-----LAEQQIEAVDKVLSEL-----DVSS 424
+ L ++ + +L+H+VDIS P EQ + + ++ EL ++++
Sbjct: 222 -SEGAGLGHLFLRHLARTRVLLHLVDISSPDPEADPIEQAVVDANAIVEELRRYDPELAA 280
Query: 425 IPKLMIWNKVDKVCDPQKVKLEAQKR--------EDVVCISALSGNGLDEFCSAVQEKL 475
P+ ++ NK+D V D Q +AQ+R V IS L+G G + A+Q+ L
Sbjct: 281 KPRWLVLNKLDMVPDAQ----DAQQRFCAEFGWTGPVFAISGLNGEGTQDLIWALQDYL 335
>sp|A4SVA3|OBG_POLSQ GTPase obg OS=Polynucleobacter necessarius subsp. asymbioticus
(strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) GN=obg
PE=3 SV=1
Length = 362
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V L+G NAGKSTL+ ++ A D F TL P V++ N F++ D G I+
Sbjct: 162 VGLLGMPNAGKSTLITAVSNARPKIADYPFTTLHPNLGVVRVGNERSFVIADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKV-----LSELDVSSI--PK 427
R L + + +L+H+VDI+ P E D V L + D + + P+
Sbjct: 222 AEGAGLGHR-FLRHLQRTGVLLHLVDIA-PFDENIDPVADAVAIVNELRKYDEALVEKPR 279
Query: 428 LMIWNKVDKVCDPQKVKLEA------QKREDVVCISALSGNGLDEFCSAVQEKL 475
++ NKVD + + + K+ A + + V ISAL+G G D+ C A+Q+ L
Sbjct: 280 WLVLNKVDMIPEEDRKKVVADFIKRFKWKGPVFEISALTGLGCDKLCYALQDYL 333
>sp|A0Q1T4|OBG_CLONN GTPase obg OS=Clostridium novyi (strain NT) GN=obg PE=3 SV=1
Length = 424
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V L+G+ N GKSTLL+ ++ A + F TL P V+++ F++ D G I+
Sbjct: 161 VGLIGFPNVGKSTLLSMVSKAKPKIANYHFTTLKPNLGVVKIEGANAFVMADIPGIIEG- 219
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSI-----PKLM 429
+ V L I + LLVHVVDIS IE K+ EL S+ P+++
Sbjct: 220 ASEGVGLGLDFLRHIERTRLLVHVVDISGVEGRNPIEDFKKINEELKNYSVKLWDRPQIV 279
Query: 430 IWNKVDKVCDP---QKVKLEAQK--REDVVCISALSGNGLDEFCSAVQEKLKDSMVWV 482
+ NK+D + D + K E K + V ISA + +G+D+ V +L SM+ +
Sbjct: 280 VANKIDMLYDEEVFETFKKEVNKLGFDKVFKISAATRDGVDDLIKEVTRQL--SMIPI 335
>sp|C0QUB5|OBG_PERMH GTPase obg OS=Persephonella marina (strain DSM 14350 / EX-H1)
GN=obg PE=3 SV=1
Length = 340
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
+ ++G+ NAGKSTL++ L+ A D F TL P +Q+ G ++ D G I+
Sbjct: 162 IGIIGFPNAGKSTLISVLSKAKPKIADYPFTTLTPVLGVLQLDYGKSVVIADIPGLIEG- 220
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSI-----PKLM 429
+ L I + L+H++DIS IEA + + EL+ S P+++
Sbjct: 221 ASKGAGLGHEFLRHIERTKALIHMIDISDQRERDPIEAFEIINKELEKYSPELVKKPQIV 280
Query: 430 IWNKVDKVCDP---QKVKLEAQKR-EDVVCISALSGNGLDEFCSAVQE 473
+ NK+D + D +K+K E KR V +S ++ GLD+ + E
Sbjct: 281 VGNKIDMLSDRSLIEKLKKEFSKRGYPFVAVSLVTKEGLDQLIKLIAE 328
>sp|Q2S9T3|OBG_HAHCH GTPase obg OS=Hahella chejuensis (strain KCTC 2396) GN=obg PE=3
SV=1
Length = 396
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 22/193 (11%)
Query: 304 RNRRVSVPVPV-VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEF 362
RN R+ + V V L+G NAGKSTL+ ++ A D F TL P V+++ F
Sbjct: 150 RNIRLELKVLADVGLLGLPNAGKSTLIRGISSAKPKVADYPFTTLVPNLGVVRVQAHRSF 209
Query: 363 LLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQ-IEAVDKVLSELD 421
++ D G I+ R L+ + + LL+HVVD+S PL E +E+ K+++EL+
Sbjct: 210 VVADIPGLIEGAADGAGLGIR-FLKHLVRTRLLLHVVDVS-PLDESDPVESAVKIVAELE 267
Query: 422 -----VSSIPKLMIWNKVDKVCDPQKVKLEAQ--KREDVVC----ISALSGNGLDEFCSA 470
+++ + ++ NK D + + +K + A KR + ISAL+G GL C
Sbjct: 268 KFSPALAARDRWLVLNKTDLLAEDEKEAICADILKRLNWSGPSYEISALAGEGLQRLC-- 325
Query: 471 VQEKLKDSMVWVE 483
+D M W+E
Sbjct: 326 -----QDIMTWIE 333
>sp|Q1R6F4|OBG_ECOUT GTPase obg OS=Escherichia coli (strain UTI89 / UPEC) GN=obg PE=3
SV=1
Length = 386
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V ++G NAGKST + ++ A D F TL P+ V+M N F++ D G I+
Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPKLM 429
R L+ + +L+H++DI +E ++SEL D+++ P+ +
Sbjct: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWL 280
Query: 430 IWNKV---DKVCDPQKVK--LEAQKRED-VVCISALSGNGLDEFCSAV 471
++NK+ DKV +K K EA ED ISA SG G+ + C V
Sbjct: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDV 328
>sp|Q5WTF1|OBG_LEGPL GTPase obg OS=Legionella pneumophila (strain Lens) GN=obg PE=3 SV=1
Length = 341
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 304 RNRRVSVPVPV-VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEF 362
RN R+ + V V L+G NAGKSTL+ ++ + D F TL P V++ F
Sbjct: 150 RNLRLELRVLADVGLLGLPNAGKSTLIRAVSSSKAKVADYPFTTLHPGLGVVRVSPYKSF 209
Query: 363 LLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-- 420
++ D G I+ R L+ +S + +L+HV+DI+ + +L+EL
Sbjct: 210 VMADIPGLIEGAAQGAGLGHR-FLKHLSRTCVLLHVIDIAPLDGSDPVADAKAILNELTQ 268
Query: 421 ---DVSSIPKLMIWNKVDKVCDPQKVKLEAQK-------REDVVCISALSGNGLDEFCSA 470
D+ + P+ ++ NK+D + D ++ + + Q ++ V ISA+ G E C A
Sbjct: 269 YNPDLLNKPRWLVLNKIDMLPDAKEREEKIQSIIKGLEWKDKVFSISAIESKGTQELCYA 328
Query: 471 VQEKLKDSMVWVEA 484
+ + L D M EA
Sbjct: 329 LMQ-LIDEMKKSEA 341
>sp|Q8FD82|OBG_ECOL6 GTPase obg OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=obg PE=3 SV=1
Length = 390
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V ++G NAGKST + ++ A D F TL P+ V+M N F++ D G I+
Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPKLM 429
R L+ + +L+H++DI +E ++SEL D+++ P+ +
Sbjct: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWL 280
Query: 430 IWNKV---DKVCDPQKVK--LEAQKRED-VVCISALSGNGLDEFCSAV 471
++NK+ DKV +K K EA ED ISA SG G+ + C V
Sbjct: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDV 328
>sp|Q0TCS7|OBG_ECOL5 GTPase obg OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=obg PE=3 SV=1
Length = 390
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V ++G NAGKST + ++ A D F TL P+ V+M N F++ D G I+
Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPKLM 429
R L+ + +L+H++DI +E ++SEL D+++ P+ +
Sbjct: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWL 280
Query: 430 IWNKV---DKVCDPQKVK--LEAQKRED-VVCISALSGNGLDEFCSAV 471
++NK+ DKV +K K EA ED ISA SG G+ + C V
Sbjct: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDV 328
>sp|A1AG86|OBG_ECOK1 GTPase obg OS=Escherichia coli O1:K1 / APEC GN=obg PE=3 SV=1
Length = 390
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V ++G NAGKST + ++ A D F TL P+ V+M N F++ D G I+
Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPKLM 429
R L+ + +L+H++DI +E ++SEL D+++ P+ +
Sbjct: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWL 280
Query: 430 IWNKV---DKVCDPQKVK--LEAQKRED-VVCISALSGNGLDEFCSAV 471
++NK+ DKV +K K EA ED ISA SG G+ + C V
Sbjct: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDV 328
>sp|B5YS72|OBG_ECO5E GTPase obg OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=obg PE=3 SV=1
Length = 390
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V ++G NAGKST + ++ A D F TL P+ V+M N F++ D G I+
Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPKLM 429
R L+ + +L+H++DI +E ++SEL D+++ P+ +
Sbjct: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWL 280
Query: 430 IWNKV---DKVCDPQKVK--LEAQKRED-VVCISALSGNGLDEFCSAV 471
++NK+ DKV +K K EA ED ISA SG G+ + C V
Sbjct: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDV 328
>sp|Q8X9K7|OBG_ECO57 GTPase obg OS=Escherichia coli O157:H7 GN=obg PE=3 SV=1
Length = 390
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V ++G NAGKST + ++ A D F TL P+ V+M N F++ D G I+
Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPKLM 429
R L+ + +L+H++DI +E ++SEL D+++ P+ +
Sbjct: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWL 280
Query: 430 IWNKV---DKVCDPQKVK--LEAQKRED-VVCISALSGNGLDEFCSAV 471
++NK+ DKV +K K EA ED ISA SG G+ + C V
Sbjct: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDV 328
>sp|B7MBV2|OBG_ECO45 GTPase obg OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=obg
PE=3 SV=1
Length = 390
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 315 VSLVGYTNAGKSTLLNRLTGATVLAEDRLFATLDPTTRRVQMKNGGEFLLTDTVGFIQKL 374
V ++G NAGKST + ++ A D F TL P+ V+M N F++ D G I+
Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221
Query: 375 PTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSEL-----DVSSIPKLM 429
R L+ + +L+H++DI +E ++SEL D+++ P+ +
Sbjct: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWL 280
Query: 430 IWNKV---DKVCDPQKVK--LEAQKRED-VVCISALSGNGLDEFCSAV 471
++NK+ DKV +K K EA ED ISA SG G+ + C V
Sbjct: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDV 328
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,529,592
Number of Sequences: 539616
Number of extensions: 8120110
Number of successful extensions: 41529
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 2386
Number of HSP's that attempted gapping in prelim test: 37932
Number of HSP's gapped (non-prelim): 4702
length of query: 536
length of database: 191,569,459
effective HSP length: 122
effective length of query: 414
effective length of database: 125,736,307
effective search space: 52054831098
effective search space used: 52054831098
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)