Query 009372
Match_columns 536
No_of_seqs 276 out of 2783
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 03:42:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1s3e_A Amine oxidase [flavin-c 100.0 1.1E-40 3.8E-45 344.2 32.2 434 56-521 3-457 (520)
2 3ka7_A Oxidoreductase; structu 100.0 5.4E-38 1.8E-42 316.6 40.4 416 58-515 1-424 (425)
3 2vvm_A Monoamine oxidase N; FA 100.0 3.7E-39 1.3E-43 331.3 24.0 428 57-522 39-489 (495)
4 2yg5_A Putrescine oxidase; oxi 100.0 1.4E-38 4.9E-43 323.4 25.8 428 57-518 5-451 (453)
5 3i6d_A Protoporphyrinogen oxid 100.0 9.8E-38 3.3E-42 319.2 26.3 425 57-518 5-468 (470)
6 2ivd_A PPO, PPOX, protoporphyr 100.0 6.9E-37 2.3E-41 313.2 30.6 424 54-521 13-476 (478)
7 4dgk_A Phytoene dehydrogenase; 100.0 1.6E-36 5.5E-41 312.3 31.3 431 57-521 1-494 (501)
8 3nks_A Protoporphyrinogen oxid 100.0 2.5E-36 8.6E-41 309.0 29.9 422 57-517 2-473 (477)
9 3nrn_A Uncharacterized protein 100.0 6.7E-35 2.3E-39 293.2 38.5 400 58-514 1-403 (421)
10 1sez_A Protoporphyrinogen oxid 100.0 7.3E-37 2.5E-41 315.0 21.4 433 55-521 11-496 (504)
11 3lov_A Protoporphyrinogen oxid 100.0 2.4E-36 8E-41 308.9 23.0 427 57-521 4-468 (475)
12 4gde_A UDP-galactopyranose mut 100.0 1E-35 3.6E-40 307.5 19.3 424 55-516 8-477 (513)
13 3k7m_X 6-hydroxy-L-nicotine ox 100.0 3.2E-33 1.1E-37 282.1 34.1 412 57-516 1-424 (431)
14 2jae_A L-amino acid oxidase; o 100.0 4.6E-35 1.6E-39 300.3 20.2 430 54-520 8-487 (489)
15 2iid_A L-amino-acid oxidase; f 100.0 1.3E-33 4.4E-38 290.2 28.0 431 55-519 31-485 (498)
16 1b37_A Protein (polyamine oxid 100.0 3.2E-34 1.1E-38 292.3 21.7 425 56-520 3-460 (472)
17 1rsg_A FMS1 protein; FAD bindi 100.0 1.4E-34 4.7E-39 298.1 18.2 426 56-521 7-510 (516)
18 4gut_A Lysine-specific histone 100.0 1.1E-33 3.9E-38 299.0 21.7 414 55-516 334-775 (776)
19 4dsg_A UDP-galactopyranose mut 100.0 6.3E-32 2.2E-36 274.5 22.1 418 56-515 8-452 (484)
20 2xag_A Lysine-specific histone 100.0 1.8E-31 6.2E-36 283.7 22.5 238 265-522 566-833 (852)
21 2z3y_A Lysine-specific histone 100.0 1.2E-31 4.2E-36 282.4 20.7 236 265-520 395-660 (662)
22 3ayj_A Pro-enzyme of L-phenyla 100.0 6.5E-31 2.2E-35 271.5 19.6 452 57-521 56-682 (721)
23 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 2.7E-29 9.1E-34 245.1 28.0 223 271-517 111-341 (342)
24 2b9w_A Putative aminooxidase; 100.0 7.3E-28 2.5E-32 242.3 22.7 409 56-515 5-423 (424)
25 1yvv_A Amine oxidase, flavin-c 99.9 1.6E-24 5.5E-29 210.9 27.1 323 57-519 2-328 (336)
26 2bcg_G Secretory pathway GDP d 99.9 1.2E-21 4.3E-26 197.5 29.2 258 54-330 8-300 (453)
27 1v0j_A UDP-galactopyranose mut 99.9 5.2E-24 1.8E-28 211.1 10.7 255 56-362 6-269 (399)
28 3p1w_A Rabgdi protein; GDI RAB 99.9 9.5E-22 3.3E-26 195.4 22.6 264 53-329 16-313 (475)
29 2bi7_A UDP-galactopyranose mut 99.9 1.5E-22 5E-27 199.3 12.3 250 57-362 3-258 (384)
30 1d5t_A Guanine nucleotide diss 99.9 4.4E-20 1.5E-24 184.9 29.6 258 55-330 4-290 (433)
31 1i8t_A UDP-galactopyranose mut 99.9 6E-22 2E-26 193.9 12.3 251 57-362 1-255 (367)
32 3hdq_A UDP-galactopyranose mut 99.8 1.4E-19 4.8E-24 176.5 17.6 253 54-362 26-283 (397)
33 1vg0_A RAB proteins geranylger 99.7 1.9E-14 6.5E-19 147.1 38.2 186 121-324 239-431 (650)
34 2e1m_A L-glutamate oxidase; L- 99.7 1.6E-17 5.6E-22 160.6 14.7 81 54-134 41-131 (376)
35 3kkj_A Amine oxidase, flavin-c 99.7 3.7E-15 1.3E-19 141.6 25.8 67 57-124 2-68 (336)
36 3dje_A Fructosyl amine: oxygen 99.7 9.4E-15 3.2E-19 147.2 24.4 64 271-336 160-226 (438)
37 2gag_B Heterotetrameric sarcos 99.7 9.9E-15 3.4E-19 145.5 22.1 58 271-330 173-230 (405)
38 3dme_A Conserved exported prot 99.6 2E-15 6.8E-20 148.6 14.1 59 271-330 149-209 (369)
39 1y56_B Sarcosine oxidase; dehy 99.6 7E-14 2.4E-18 138.1 23.7 58 271-330 148-205 (382)
40 3ps9_A TRNA 5-methylaminomethy 99.6 5.4E-13 1.8E-17 141.4 30.7 62 271-335 416-477 (676)
41 1ryi_A Glycine oxidase; flavop 99.6 1.6E-13 5.4E-18 135.6 23.7 57 271-330 163-219 (382)
42 3pvc_A TRNA 5-methylaminomethy 99.6 6.2E-13 2.1E-17 141.0 28.4 62 271-335 411-473 (689)
43 2oln_A NIKD protein; flavoprot 99.6 2E-13 6.8E-18 135.6 20.7 57 271-330 152-208 (397)
44 3nlc_A Uncharacterized protein 99.5 8.5E-13 2.9E-17 134.2 24.0 58 272-330 220-277 (549)
45 2gf3_A MSOX, monomeric sarcosi 99.5 1.5E-12 5.1E-17 128.9 24.6 62 271-336 149-210 (389)
46 3nyc_A D-arginine dehydrogenas 99.5 1.3E-14 4.5E-19 143.4 9.0 57 271-330 153-209 (381)
47 3axb_A Putative oxidoreductase 99.5 5.9E-14 2E-18 141.7 8.9 63 271-335 180-258 (448)
48 3da1_A Glycerol-3-phosphate de 99.5 1.9E-12 6.5E-17 133.5 20.2 59 271-330 169-232 (561)
49 3oz2_A Digeranylgeranylglycero 99.5 3.9E-12 1.3E-16 126.2 20.6 39 57-95 4-42 (397)
50 3ihg_A RDME; flavoenzyme, anth 99.4 2E-11 7E-16 125.8 25.6 64 272-335 120-189 (535)
51 2uzz_A N-methyl-L-tryptophan o 99.4 7.1E-13 2.4E-17 130.4 13.6 62 271-336 148-209 (372)
52 4at0_A 3-ketosteroid-delta4-5a 99.4 1.5E-12 5.2E-17 133.2 16.3 58 273-330 203-264 (510)
53 2i0z_A NAD(FAD)-utilizing dehy 99.4 5.2E-13 1.8E-17 134.3 12.0 59 271-330 133-191 (447)
54 3cgv_A Geranylgeranyl reductas 99.4 1.4E-11 4.9E-16 122.2 22.0 58 272-330 102-162 (397)
55 2rgh_A Alpha-glycerophosphate 99.4 5.4E-11 1.8E-15 122.9 26.7 62 271-334 187-253 (571)
56 3rp8_A Flavoprotein monooxygen 99.4 1.8E-12 6.1E-17 129.1 14.9 54 272-329 127-180 (407)
57 3nix_A Flavoprotein/dehydrogen 99.4 2.8E-11 9.6E-16 121.1 22.9 65 272-336 106-173 (421)
58 1y0p_A Fumarate reductase flav 99.4 9.6E-12 3.3E-16 129.1 19.1 59 272-330 255-317 (571)
59 3i3l_A Alkylhalidase CMLS; fla 99.4 4.2E-11 1.4E-15 123.7 23.5 58 272-330 128-188 (591)
60 1qo8_A Flavocytochrome C3 fuma 99.4 3.3E-12 1.1E-16 132.4 14.7 59 272-330 250-312 (566)
61 3v76_A Flavoprotein; structura 99.4 1.4E-12 4.8E-17 129.1 10.7 57 271-330 131-187 (417)
62 1pj5_A N,N-dimethylglycine oxi 99.4 1.6E-12 5.6E-17 140.9 11.2 58 271-330 150-207 (830)
63 3fmw_A Oxygenase; mithramycin, 99.3 8.1E-11 2.8E-15 121.3 20.9 62 273-336 149-214 (570)
64 2qcu_A Aerobic glycerol-3-phos 99.3 2.1E-10 7.1E-15 117.0 22.6 58 271-330 148-210 (501)
65 2gmh_A Electron transfer flavo 99.3 3.2E-10 1.1E-14 117.4 23.7 59 272-330 144-217 (584)
66 1c0p_A D-amino acid oxidase; a 99.3 1.2E-10 4.1E-15 113.9 19.1 40 55-94 4-43 (363)
67 3g3e_A D-amino-acid oxidase; F 99.3 2E-12 7E-17 125.9 5.3 189 271-520 141-336 (351)
68 2e1m_C L-glutamate oxidase; L- 99.2 2.9E-12 9.9E-17 110.7 3.8 104 416-523 48-157 (181)
69 2gqf_A Hypothetical protein HI 99.2 8.1E-11 2.8E-15 116.1 13.8 58 271-330 108-168 (401)
70 4hb9_A Similarities with proba 99.2 2.3E-10 8E-15 113.9 17.3 48 286-334 123-171 (412)
71 2wdq_A Succinate dehydrogenase 99.2 2.1E-10 7.3E-15 118.7 17.4 59 272-330 143-206 (588)
72 1d4d_A Flavocytochrome C fumar 99.2 1.5E-10 5.3E-15 119.7 16.3 59 272-330 255-317 (572)
73 3atr_A Conserved archaeal prot 99.2 2.3E-09 8E-14 108.0 24.4 63 273-336 101-169 (453)
74 2dkh_A 3-hydroxybenzoate hydro 99.2 3.3E-09 1.1E-13 111.3 25.7 65 273-337 142-219 (639)
75 1k0i_A P-hydroxybenzoate hydro 99.2 2.9E-09 1E-13 105.3 24.1 63 273-336 104-170 (394)
76 1chu_A Protein (L-aspartate ox 99.2 1.3E-10 4.5E-15 119.1 13.1 59 272-330 138-208 (540)
77 2bs2_A Quinol-fumarate reducta 99.1 3.5E-10 1.2E-14 118.0 14.9 58 272-330 158-220 (660)
78 2weu_A Tryptophan 5-halogenase 99.1 9.5E-10 3.3E-14 112.7 17.7 59 271-330 172-230 (511)
79 4ap3_A Steroid monooxygenase; 99.1 3.2E-10 1.1E-14 116.4 13.2 43 55-97 19-61 (549)
80 3c4n_A Uncharacterized protein 99.1 1.7E-11 5.9E-16 121.7 3.5 57 271-330 171-236 (405)
81 2qa1_A PGAE, polyketide oxygen 99.1 3.3E-10 1.1E-14 115.2 12.6 62 273-336 107-172 (500)
82 2x3n_A Probable FAD-dependent 99.1 2.2E-10 7.4E-15 113.7 10.7 64 272-336 107-173 (399)
83 2h88_A Succinate dehydrogenase 99.1 8.1E-10 2.8E-14 114.4 15.1 58 272-330 155-217 (621)
84 3gwf_A Cyclohexanone monooxyge 99.1 5.1E-10 1.8E-14 114.6 13.3 55 276-330 91-147 (540)
85 2qa2_A CABE, polyketide oxygen 99.1 6E-10 2E-14 113.3 13.4 62 273-336 108-173 (499)
86 3o0h_A Glutathione reductase; 99.1 1.8E-10 6.1E-15 117.1 9.3 57 272-330 232-288 (484)
87 1rp0_A ARA6, thiazole biosynth 99.1 7.6E-10 2.6E-14 104.0 12.9 41 56-96 38-79 (284)
88 2vou_A 2,6-dihydroxypyridine h 99.1 1.6E-09 5.4E-14 107.3 15.9 61 56-132 4-65 (397)
89 3itj_A Thioredoxin reductase 1 99.1 2.9E-10 1E-14 110.0 10.3 69 260-329 196-270 (338)
90 1mo9_A ORF3; nucleotide bindin 99.1 1.6E-09 5.4E-14 111.1 16.2 59 272-330 255-316 (523)
91 2aqj_A Tryptophan halogenase, 99.1 1.2E-09 4.1E-14 112.5 15.3 59 271-330 164-222 (538)
92 3alj_A 2-methyl-3-hydroxypyrid 99.1 5.3E-10 1.8E-14 110.0 12.1 59 272-335 107-166 (379)
93 3e1t_A Halogenase; flavoprotei 99.0 1.1E-09 3.6E-14 112.2 12.9 63 272-335 111-178 (512)
94 1w4x_A Phenylacetone monooxyge 99.0 1.4E-09 4.8E-14 112.0 13.8 43 55-97 14-56 (542)
95 4a9w_A Monooxygenase; baeyer-v 99.0 6.7E-10 2.3E-14 108.3 10.9 41 57-97 3-43 (357)
96 2pyx_A Tryptophan halogenase; 99.0 3.5E-09 1.2E-13 108.7 16.6 59 271-330 174-233 (526)
97 2e4g_A Tryptophan halogenase; 99.0 2.3E-09 7.8E-14 110.6 14.8 59 271-330 193-252 (550)
98 3jsk_A Cypbp37 protein; octame 99.0 2.5E-09 8.6E-14 101.2 13.4 41 56-96 78-120 (344)
99 1kf6_A Fumarate reductase flav 99.0 3.9E-09 1.3E-13 109.5 15.4 58 272-330 134-197 (602)
100 2bry_A NEDD9 interacting prote 99.0 1.3E-09 4.4E-14 110.7 11.6 40 55-94 90-129 (497)
101 3lxd_A FAD-dependent pyridine 99.0 2.4E-10 8.1E-15 113.9 6.0 58 272-330 194-251 (415)
102 4dna_A Probable glutathione re 99.0 1.4E-09 4.8E-14 109.8 11.6 57 272-330 211-268 (463)
103 3fg2_P Putative rubredoxin red 99.0 6.6E-10 2.3E-14 110.2 8.8 57 272-329 184-240 (404)
104 2zxi_A TRNA uridine 5-carboxym 99.0 2.9E-09 1E-13 108.6 13.6 58 273-332 124-182 (637)
105 3ces_A MNMG, tRNA uridine 5-ca 99.0 1.6E-09 5.4E-14 111.0 11.6 58 273-332 125-183 (651)
106 3uox_A Otemo; baeyer-villiger 99.0 7.8E-10 2.7E-14 113.4 9.3 42 56-97 8-49 (545)
107 3k30_A Histamine dehydrogenase 99.0 2.4E-09 8.2E-14 113.4 12.6 46 53-98 387-432 (690)
108 3ab1_A Ferredoxin--NADP reduct 99.0 2.4E-09 8.3E-14 104.5 11.7 41 56-96 13-53 (360)
109 2e5v_A L-aspartate oxidase; ar 99.0 3.4E-09 1.2E-13 106.9 12.6 57 272-330 119-176 (472)
110 2gjc_A Thiazole biosynthetic e 99.0 5.6E-09 1.9E-13 98.3 13.1 41 56-96 64-106 (326)
111 2cul_A Glucose-inhibited divis 99.0 4.3E-09 1.5E-13 95.6 11.8 56 273-330 69-125 (232)
112 4fk1_A Putative thioredoxin re 98.9 7.4E-09 2.5E-13 98.4 13.5 38 56-94 5-42 (304)
113 1jnr_A Adenylylsulfate reducta 98.9 5.7E-09 1.9E-13 109.3 13.7 59 272-330 151-218 (643)
114 3c96_A Flavin-containing monoo 98.9 5.1E-09 1.8E-13 104.1 12.6 37 57-93 4-41 (410)
115 2zbw_A Thioredoxin reductase; 98.9 4.2E-09 1.4E-13 101.7 11.5 41 56-96 4-44 (335)
116 3lzw_A Ferredoxin--NADP reduct 98.9 3.1E-09 1.1E-13 102.3 10.0 40 57-96 7-46 (332)
117 3f8d_A Thioredoxin reductase ( 98.9 6.1E-09 2.1E-13 99.9 11.9 38 57-96 15-52 (323)
118 1pn0_A Phenol 2-monooxygenase; 98.9 3E-07 1E-11 96.6 25.3 61 57-133 8-73 (665)
119 1fec_A Trypanothione reductase 98.9 4.3E-09 1.5E-13 106.9 10.9 57 273-330 232-288 (490)
120 3d1c_A Flavin-containing putat 98.9 3.5E-09 1.2E-13 103.7 9.7 53 275-330 91-143 (369)
121 3ef6_A Toluene 1,2-dioxygenase 98.9 8.2E-10 2.8E-14 109.6 5.2 56 273-330 186-241 (410)
122 3r9u_A Thioredoxin reductase; 98.9 5.8E-09 2E-13 99.7 10.9 42 56-98 3-45 (315)
123 3lad_A Dihydrolipoamide dehydr 98.9 7.9E-09 2.7E-13 104.8 11.6 57 272-330 221-280 (476)
124 3oc4_A Oxidoreductase, pyridin 98.9 2.2E-09 7.6E-14 108.0 7.4 56 272-330 189-244 (452)
125 3cp8_A TRNA uridine 5-carboxym 98.9 6E-09 2E-13 106.7 10.4 56 273-330 118-174 (641)
126 3urh_A Dihydrolipoyl dehydroge 98.9 1.2E-08 4.1E-13 103.8 12.7 42 56-97 24-65 (491)
127 1ges_A Glutathione reductase; 98.9 1E-08 3.5E-13 103.0 12.1 57 273-330 209-265 (450)
128 3gyx_A Adenylylsulfate reducta 98.9 9.4E-09 3.2E-13 107.2 11.7 59 272-330 166-233 (662)
129 2yqu_A 2-oxoglutarate dehydrog 98.9 1.1E-08 3.8E-13 103.1 11.8 57 272-330 208-264 (455)
130 2xdo_A TETX2 protein; tetracyc 98.8 3.5E-08 1.2E-12 97.6 14.6 39 56-94 25-63 (398)
131 2ywl_A Thioredoxin reductase r 98.8 2.2E-08 7.4E-13 87.1 11.5 51 275-329 59-109 (180)
132 1onf_A GR, grase, glutathione 98.8 2.1E-08 7.1E-13 102.2 13.1 57 273-330 218-275 (500)
133 3ics_A Coenzyme A-disulfide re 98.8 2.3E-08 7.8E-13 104.2 13.7 54 272-329 228-281 (588)
134 2hqm_A GR, grase, glutathione 98.8 4.2E-09 1.4E-13 106.7 7.6 58 273-330 227-285 (479)
135 3dk9_A Grase, GR, glutathione 98.8 1E-08 3.4E-13 104.1 10.3 59 272-330 228-293 (478)
136 1xdi_A RV3303C-LPDA; reductase 98.8 5.2E-09 1.8E-13 106.7 8.0 60 273-334 224-283 (499)
137 2r0c_A REBC; flavin adenine di 98.8 1.9E-08 6.5E-13 103.6 12.0 62 56-133 25-86 (549)
138 2wpf_A Trypanothione reductase 98.8 2.7E-09 9.3E-14 108.5 5.5 57 273-330 236-292 (495)
139 1y56_A Hypothetical protein PH 98.8 3.1E-08 1.1E-12 100.5 13.3 52 277-330 262-313 (493)
140 2r9z_A Glutathione amide reduc 98.8 2.2E-08 7.4E-13 101.0 12.0 56 273-330 208-264 (463)
141 3s5w_A L-ornithine 5-monooxyge 98.8 1.4E-08 4.9E-13 102.6 10.4 38 56-93 29-71 (463)
142 2gv8_A Monooxygenase; FMO, FAD 98.8 1.5E-08 5E-13 101.9 10.2 43 56-98 5-49 (447)
143 3iwa_A FAD-dependent pyridine 98.8 6.8E-08 2.3E-12 97.8 15.1 56 272-329 202-257 (472)
144 2q0l_A TRXR, thioredoxin reduc 98.8 1.5E-08 5E-13 96.7 9.3 39 57-96 1-40 (311)
145 2q7v_A Thioredoxin reductase; 98.8 2.1E-08 7.2E-13 96.3 10.5 41 56-97 7-47 (325)
146 1trb_A Thioredoxin reductase; 98.8 2.6E-08 8.8E-13 95.4 10.6 56 273-329 185-246 (320)
147 1q1r_A Putidaredoxin reductase 98.7 1.8E-08 6.2E-13 100.6 9.2 57 273-329 192-249 (431)
148 1fl2_A Alkyl hydroperoxide red 98.7 6.7E-08 2.3E-12 92.0 12.6 52 278-329 62-114 (310)
149 3dgh_A TRXR-1, thioredoxin red 98.7 3.6E-08 1.2E-12 100.0 11.2 58 272-330 227-289 (483)
150 3h8l_A NADH oxidase; membrane 98.7 6.8E-08 2.3E-12 95.9 12.5 52 272-329 218-269 (409)
151 1dxl_A Dihydrolipoamide dehydr 98.7 6.6E-08 2.3E-12 97.9 12.0 43 55-97 4-46 (470)
152 3fbs_A Oxidoreductase; structu 98.7 7.5E-08 2.6E-12 91.0 11.6 42 477-520 252-293 (297)
153 1vdc_A NTR, NADPH dependent th 98.7 6.3E-08 2.2E-12 93.2 11.2 42 479-521 284-325 (333)
154 2v3a_A Rubredoxin reductase; a 98.7 6.9E-09 2.4E-13 102.1 4.4 57 272-330 187-243 (384)
155 2xve_A Flavin-containing monoo 98.7 1.3E-07 4.5E-12 95.1 13.6 41 58-98 3-49 (464)
156 2a87_A TRXR, TR, thioredoxin r 98.7 1.3E-07 4.4E-12 91.1 12.5 52 479-531 277-328 (335)
157 3ntd_A FAD-dependent pyridine 98.7 2.1E-07 7.1E-12 96.6 14.8 57 272-329 192-266 (565)
158 1hyu_A AHPF, alkyl hydroperoxi 98.7 1.5E-07 5E-12 96.3 13.1 52 278-329 273-325 (521)
159 1v59_A Dihydrolipoamide dehydr 98.7 6.4E-08 2.2E-12 98.2 10.3 43 56-98 4-46 (478)
160 2cdu_A NADPH oxidase; flavoenz 98.7 1.3E-08 4.6E-13 102.3 5.2 57 272-330 191-247 (452)
161 1ojt_A Surface protein; redox- 98.6 1.3E-07 4.4E-12 95.9 11.9 42 56-97 5-46 (482)
162 3qvp_A Glucose oxidase; oxidor 98.6 1.4E-07 4.7E-12 96.8 11.6 36 55-90 17-53 (583)
163 3klj_A NAD(FAD)-dependent dehy 98.6 2E-07 6.7E-12 91.3 12.1 44 282-329 72-115 (385)
164 4b1b_A TRXR, thioredoxin reduc 98.6 8E-08 2.7E-12 97.9 9.5 57 272-330 263-319 (542)
165 3qfa_A Thioredoxin reductase 1 98.6 4.6E-07 1.6E-11 92.6 14.9 36 55-90 30-65 (519)
166 3fpz_A Thiazole biosynthetic e 98.6 2E-08 7E-13 96.3 3.9 42 56-97 64-107 (326)
167 3dgz_A Thioredoxin reductase 2 98.6 6.8E-07 2.3E-11 90.7 14.6 43 55-97 4-54 (488)
168 1ebd_A E3BD, dihydrolipoamide 98.6 2.6E-07 9.1E-12 92.9 11.3 40 57-97 3-42 (455)
169 3h28_A Sulfide-quinone reducta 98.5 1.5E-07 5.1E-12 94.0 9.1 38 58-95 3-42 (430)
170 2a8x_A Dihydrolipoyl dehydroge 98.5 3.4E-07 1.2E-11 92.4 11.6 40 57-97 3-42 (464)
171 2gqw_A Ferredoxin reductase; f 98.5 4.3E-08 1.5E-12 97.1 4.6 51 273-329 188-238 (408)
172 1m6i_A Programmed cell death p 98.5 1.3E-07 4.5E-12 95.9 8.2 57 272-330 226-282 (493)
173 3q9t_A Choline dehydrogenase a 98.5 1.8E-07 6.3E-12 96.0 8.6 37 55-91 4-41 (577)
174 2bc0_A NADH oxidase; flavoprot 98.5 5.8E-07 2E-11 91.2 12.3 55 273-330 237-291 (490)
175 1n4w_A CHOD, cholesterol oxida 98.5 4.8E-07 1.6E-11 92.0 11.5 62 273-334 222-292 (504)
176 4eqs_A Coenzyme A disulfide re 98.5 1.5E-06 5.2E-11 86.7 14.7 53 272-330 188-240 (437)
177 4gcm_A TRXR, thioredoxin reduc 98.5 9.6E-08 3.3E-12 91.0 5.2 41 56-97 5-45 (312)
178 3fim_B ARYL-alcohol oxidase; A 98.4 2.8E-07 9.5E-12 94.4 7.9 36 57-92 2-38 (566)
179 1coy_A Cholesterol oxidase; ox 98.4 1.1E-06 3.8E-11 89.4 12.1 62 273-334 227-297 (507)
180 3t37_A Probable dehydrogenase; 98.4 4.6E-07 1.6E-11 93.1 9.3 37 55-91 15-52 (526)
181 3vrd_B FCCB subunit, flavocyto 98.4 5.3E-08 1.8E-12 96.4 2.0 45 282-328 212-256 (401)
182 4b63_A L-ornithine N5 monooxyg 98.4 1.5E-06 5E-11 88.3 12.5 44 53-96 35-78 (501)
183 4g6h_A Rotenone-insensitive NA 98.4 5.7E-07 2E-11 91.2 9.1 56 271-328 271-330 (502)
184 2jbv_A Choline oxidase; alcoho 98.4 1.4E-06 4.6E-11 89.5 11.8 52 284-335 221-278 (546)
185 4a5l_A Thioredoxin reductase; 98.4 2.6E-07 8.9E-12 88.0 5.1 36 56-91 3-38 (314)
186 3cgb_A Pyridine nucleotide-dis 98.3 2.5E-06 8.4E-11 86.4 12.2 36 57-92 36-73 (480)
187 1xhc_A NADH oxidase /nitrite r 98.3 1.9E-06 6.6E-11 83.8 11.0 34 57-91 8-41 (367)
188 1nhp_A NADH peroxidase; oxidor 98.3 2.9E-06 9.8E-11 85.1 12.5 36 58-93 1-38 (447)
189 3sx6_A Sulfide-quinone reducta 98.3 2.4E-06 8.2E-11 85.4 10.9 34 57-90 4-40 (437)
190 2vdc_G Glutamate synthase [NAD 98.3 6.5E-07 2.2E-11 89.5 6.4 43 55-97 120-162 (456)
191 3cty_A Thioredoxin reductase; 98.3 5.8E-07 2E-11 85.9 5.0 41 55-96 14-54 (319)
192 3hyw_A Sulfide-quinone reducta 98.2 2.8E-06 9.5E-11 84.7 9.2 33 58-90 3-37 (430)
193 3l8k_A Dihydrolipoyl dehydroge 98.2 6.4E-07 2.2E-11 90.3 4.4 42 57-98 4-45 (466)
194 2qae_A Lipoamide, dihydrolipoy 98.2 8.4E-07 2.9E-11 89.6 4.9 41 57-97 2-42 (468)
195 1zmd_A Dihydrolipoyl dehydroge 98.2 7.6E-07 2.6E-11 90.1 4.2 42 56-97 5-46 (474)
196 1zk7_A HGII, reductase, mercur 98.1 1.9E-06 6.4E-11 87.0 5.3 56 272-330 216-271 (467)
197 1o94_A Tmadh, trimethylamine d 98.1 2.5E-06 8.7E-11 90.7 6.5 45 54-98 386-430 (729)
198 3pl8_A Pyranose 2-oxidase; sub 98.1 2E-06 6.9E-11 89.4 5.2 41 56-96 45-85 (623)
199 3c4a_A Probable tryptophan hyd 98.1 2.5E-06 8.5E-11 83.6 5.3 35 58-92 1-37 (381)
200 3ic9_A Dihydrolipoamide dehydr 98.1 1.9E-06 6.5E-11 87.4 4.5 39 57-96 8-46 (492)
201 1lvl_A Dihydrolipoamide dehydr 98.1 1.8E-06 6.1E-11 86.8 3.8 41 56-97 4-44 (458)
202 3g5s_A Methylenetetrahydrofola 98.0 6.3E-06 2.2E-10 78.4 7.1 40 57-96 1-40 (443)
203 3ihm_A Styrene monooxygenase A 98.0 2.6E-06 8.9E-11 84.9 4.6 34 57-90 22-55 (430)
204 1nhp_A NADH peroxidase; oxidor 98.0 4.2E-05 1.5E-09 76.5 12.3 36 56-91 148-183 (447)
205 1ps9_A 2,4-dienoyl-COA reducta 98.0 6.8E-06 2.3E-10 86.8 6.5 44 54-97 370-413 (671)
206 1v59_A Dihydrolipoamide dehydr 98.0 4.6E-05 1.6E-09 77.0 12.4 35 57-91 183-217 (478)
207 2eq6_A Pyruvate dehydrogenase 98.0 4.4E-05 1.5E-09 76.8 11.9 34 58-91 170-203 (464)
208 2eq6_A Pyruvate dehydrogenase 97.9 4.7E-06 1.6E-10 83.9 4.4 56 273-330 211-271 (464)
209 1ebd_A E3BD, dihydrolipoamide 97.9 6.7E-05 2.3E-09 75.3 11.5 35 57-91 170-204 (455)
210 2e1m_B L-glutamate oxidase; L- 97.9 1.3E-05 4.4E-10 63.9 4.8 106 315-442 4-111 (130)
211 2gag_A Heterotetrameric sarcos 97.9 8.9E-06 3E-10 89.1 5.1 41 57-97 128-168 (965)
212 1gte_A Dihydropyrimidine dehyd 97.8 1.3E-05 4.6E-10 88.3 5.7 41 56-96 186-227 (1025)
213 3cgb_A Pyridine nucleotide-dis 97.8 0.0001 3.5E-09 74.4 11.7 50 278-330 233-282 (480)
214 1lqt_A FPRA; NADP+ derivative, 97.8 9.3E-06 3.2E-10 81.2 3.8 41 57-97 3-50 (456)
215 3kd9_A Coenzyme A disulfide re 97.8 1.4E-05 4.8E-10 80.1 5.1 53 273-329 191-243 (449)
216 2x8g_A Thioredoxin glutathione 97.8 1.2E-05 4.1E-10 83.8 4.7 35 55-89 105-139 (598)
217 1zmd_A Dihydrolipoyl dehydroge 97.8 0.00016 5.3E-09 73.0 12.8 35 57-91 178-212 (474)
218 1cjc_A Protein (adrenodoxin re 97.8 1.5E-05 5E-10 79.9 4.9 42 56-97 5-48 (460)
219 1ojt_A Surface protein; redox- 97.8 6.8E-05 2.3E-09 75.8 9.5 50 279-330 233-286 (482)
220 1lvl_A Dihydrolipoamide dehydr 97.7 9E-05 3.1E-09 74.3 10.0 35 57-91 171-205 (458)
221 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00021 7.1E-09 71.9 12.7 35 57-91 171-205 (464)
222 1kdg_A CDH, cellobiose dehydro 97.7 1.9E-05 6.5E-10 81.2 5.1 58 276-334 199-265 (546)
223 2qae_A Lipoamide, dihydrolipoy 97.7 0.00024 8.2E-09 71.5 12.6 35 57-91 174-208 (468)
224 1xhc_A NADH oxidase /nitrite r 97.6 0.00016 5.4E-09 70.2 9.7 34 58-91 144-177 (367)
225 1zk7_A HGII, reductase, mercur 97.6 0.0003 1E-08 70.7 11.6 35 57-91 176-210 (467)
226 1dxl_A Dihydrolipoamide dehydr 97.6 0.00019 6.4E-09 72.4 9.9 35 57-91 177-211 (470)
227 1ju2_A HydroxynitrIle lyase; f 97.6 2.5E-05 8.4E-10 79.9 3.2 37 55-92 24-60 (536)
228 3ic9_A Dihydrolipoamide dehydr 97.6 0.00045 1.5E-08 69.9 12.3 35 57-91 174-208 (492)
229 3s5w_A L-ornithine 5-monooxyge 97.6 0.00048 1.6E-08 69.2 12.4 36 56-91 226-263 (463)
230 3uox_A Otemo; baeyer-villiger 97.4 0.00082 2.8E-08 68.7 11.9 49 275-330 341-391 (545)
231 2zbw_A Thioredoxin reductase; 97.3 0.0016 5.5E-08 62.1 11.8 35 56-90 151-185 (335)
232 3dgz_A Thioredoxin reductase 2 97.3 0.0024 8.1E-08 64.6 13.3 32 58-89 186-217 (488)
233 3gwf_A Cyclohexanone monooxyge 97.3 0.0027 9.3E-08 64.8 13.8 36 56-91 177-212 (540)
234 3kd9_A Coenzyme A disulfide re 97.2 0.0018 6.1E-08 64.7 11.9 35 57-91 148-182 (449)
235 3ab1_A Ferredoxin--NADP reduct 97.2 0.0013 4.5E-08 63.5 10.5 34 57-90 163-196 (360)
236 1gpe_A Protein (glucose oxidas 97.2 0.0002 6.9E-09 73.9 4.7 37 56-92 23-60 (587)
237 4ap3_A Steroid monooxygenase; 97.1 0.0042 1.4E-07 63.5 13.3 36 56-91 190-225 (549)
238 2x8g_A Thioredoxin glutathione 96.9 0.0074 2.5E-07 62.6 13.1 32 58-89 287-318 (598)
239 3qfa_A Thioredoxin reductase 1 96.9 0.0072 2.5E-07 61.4 12.6 31 58-88 211-241 (519)
240 2g1u_A Hypothetical protein TM 96.5 0.0035 1.2E-07 52.2 5.5 40 52-91 14-53 (155)
241 3fwz_A Inner membrane protein 96.4 0.0045 1.5E-07 50.5 5.8 36 56-91 6-41 (140)
242 1lss_A TRK system potassium up 96.3 0.0045 1.6E-07 50.3 5.1 35 56-90 3-37 (140)
243 4gcm_A TRXR, thioredoxin reduc 96.2 0.0041 1.4E-07 58.6 4.8 35 57-91 145-179 (312)
244 3klj_A NAD(FAD)-dependent dehy 96.1 0.0045 1.5E-07 60.2 4.9 38 57-94 146-183 (385)
245 3llv_A Exopolyphosphatase-rela 96.0 0.0068 2.3E-07 49.4 4.9 34 57-90 6-39 (141)
246 2v3a_A Rubredoxin reductase; a 95.7 0.011 3.9E-07 57.4 5.9 38 57-94 145-182 (384)
247 2yqu_A 2-oxoglutarate dehydrog 95.6 0.011 3.9E-07 58.9 5.7 36 57-92 167-202 (455)
248 3ic5_A Putative saccharopine d 95.6 0.012 3.9E-07 46.1 4.6 34 57-90 5-39 (118)
249 4a5l_A Thioredoxin reductase; 95.5 0.011 3.8E-07 55.6 4.7 34 56-89 151-184 (314)
250 1id1_A Putative potassium chan 95.5 0.018 6E-07 47.7 5.4 33 57-89 3-35 (153)
251 2gqw_A Ferredoxin reductase; f 95.5 0.016 5.4E-07 56.9 5.9 38 57-94 145-182 (408)
252 1ges_A Glutathione reductase; 95.3 0.017 5.7E-07 57.6 5.7 37 57-93 167-203 (450)
253 2hmt_A YUAA protein; RCK, KTN, 95.3 0.02 6.8E-07 46.6 5.0 34 57-90 6-39 (144)
254 4eqs_A Coenzyme A disulfide re 95.3 0.025 8.6E-07 56.0 6.6 59 57-132 147-205 (437)
255 3c85_A Putative glutathione-re 95.2 0.022 7.5E-07 48.8 5.2 35 56-90 38-73 (183)
256 2x5o_A UDP-N-acetylmuramoylala 95.2 0.016 5.5E-07 57.4 4.9 37 57-93 5-41 (439)
257 2bc0_A NADH oxidase; flavoprot 95.2 0.021 7.2E-07 57.5 5.8 38 56-93 193-230 (490)
258 3lk7_A UDP-N-acetylmuramoylala 95.1 0.018 6E-07 57.3 5.0 35 56-90 8-42 (451)
259 3ado_A Lambda-crystallin; L-gu 95.1 0.019 6.5E-07 53.6 4.8 35 56-90 5-39 (319)
260 2r9z_A Glutathione amide reduc 95.1 0.022 7.7E-07 56.9 5.7 36 57-92 166-201 (463)
261 1q1r_A Putidaredoxin reductase 94.9 0.029 9.8E-07 55.5 5.8 37 57-93 149-185 (431)
262 3ef6_A Toluene 1,2-dioxygenase 94.9 0.029 9.8E-07 55.1 5.7 39 56-94 142-180 (410)
263 1f0y_A HCDH, L-3-hydroxyacyl-C 94.9 0.029 1E-06 52.4 5.6 34 56-89 14-47 (302)
264 3l4b_C TRKA K+ channel protien 94.9 0.02 6.8E-07 50.6 4.2 33 58-90 1-33 (218)
265 3d1c_A Flavin-containing putat 94.8 0.025 8.7E-07 54.5 5.1 35 57-91 166-200 (369)
266 2a9f_A Putative malic enzyme ( 94.7 0.027 9.2E-07 53.6 4.7 36 55-90 186-222 (398)
267 1kyq_A Met8P, siroheme biosynt 94.7 0.021 7E-07 52.0 3.7 34 56-89 12-45 (274)
268 3dfz_A SIRC, precorrin-2 dehyd 94.6 0.031 1.1E-06 49.1 4.7 34 56-89 30-63 (223)
269 2hqm_A GR, grase, glutathione 94.6 0.035 1.2E-06 55.7 5.7 36 57-92 185-220 (479)
270 1pzg_A LDH, lactate dehydrogen 94.6 0.038 1.3E-06 52.3 5.5 35 56-90 8-43 (331)
271 2q0l_A TRXR, thioredoxin reduc 94.6 0.035 1.2E-06 52.0 5.2 35 57-91 143-177 (311)
272 3e8x_A Putative NAD-dependent 94.5 0.038 1.3E-06 49.5 5.2 35 56-90 20-55 (236)
273 2xve_A Flavin-containing monoo 94.5 0.036 1.2E-06 55.4 5.4 37 56-92 196-232 (464)
274 4dio_A NAD(P) transhydrogenase 94.5 0.04 1.4E-06 53.1 5.4 35 56-90 189-223 (405)
275 1onf_A GR, grase, glutathione 94.5 0.033 1.1E-06 56.2 5.2 37 57-93 176-212 (500)
276 1fl2_A Alkyl hydroperoxide red 94.4 0.036 1.2E-06 51.9 4.8 35 57-91 144-178 (310)
277 1vl6_A Malate oxidoreductase; 94.3 0.037 1.3E-06 52.6 4.7 34 56-89 191-225 (388)
278 3vtf_A UDP-glucose 6-dehydroge 94.3 0.04 1.4E-06 53.8 5.1 39 52-90 16-54 (444)
279 2cdu_A NADPH oxidase; flavoenz 94.2 0.041 1.4E-06 54.8 5.1 37 57-93 149-185 (452)
280 3i83_A 2-dehydropantoate 2-red 94.2 0.045 1.5E-06 51.6 5.1 33 58-90 3-35 (320)
281 3eag_A UDP-N-acetylmuramate:L- 94.2 0.046 1.6E-06 51.7 5.1 35 56-90 3-38 (326)
282 4e12_A Diketoreductase; oxidor 94.1 0.045 1.5E-06 50.6 4.9 34 57-90 4-37 (283)
283 3lxd_A FAD-dependent pyridine 94.1 0.052 1.8E-06 53.3 5.7 38 57-94 152-189 (415)
284 3p2y_A Alanine dehydrogenase/p 94.1 0.043 1.5E-06 52.3 4.7 34 56-89 183-216 (381)
285 2dpo_A L-gulonate 3-dehydrogen 94.1 0.046 1.6E-06 51.3 4.8 34 57-90 6-39 (319)
286 3k6j_A Protein F01G10.3, confi 94.1 0.058 2E-06 53.1 5.7 36 56-91 53-88 (460)
287 1vdc_A NTR, NADPH dependent th 94.1 0.042 1.4E-06 52.0 4.7 36 56-91 158-193 (333)
288 3doj_A AT3G25530, dehydrogenas 94.0 0.06 2.1E-06 50.5 5.5 37 54-90 18-54 (310)
289 3fg2_P Putative rubredoxin red 94.0 0.053 1.8E-06 53.0 5.4 37 57-93 142-178 (404)
290 3ntd_A FAD-dependent pyridine 94.0 0.057 1.9E-06 55.5 5.8 36 57-92 151-186 (565)
291 2y0c_A BCEC, UDP-glucose dehyd 94.0 0.05 1.7E-06 54.2 5.1 35 56-90 7-41 (478)
292 2raf_A Putative dinucleotide-b 94.0 0.062 2.1E-06 47.0 5.2 36 56-91 18-53 (209)
293 3urh_A Dihydrolipoyl dehydroge 93.9 0.049 1.7E-06 54.9 5.1 35 57-91 198-232 (491)
294 2a87_A TRXR, TR, thioredoxin r 93.9 0.049 1.7E-06 51.7 4.8 36 56-91 154-189 (335)
295 4b1b_A TRXR, thioredoxin reduc 93.9 0.051 1.8E-06 55.1 5.2 35 58-92 224-258 (542)
296 2q7v_A Thioredoxin reductase; 93.9 0.049 1.7E-06 51.4 4.8 35 57-91 152-186 (325)
297 3hn2_A 2-dehydropantoate 2-red 93.9 0.046 1.6E-06 51.3 4.5 33 58-90 3-35 (312)
298 1trb_A Thioredoxin reductase; 93.9 0.049 1.7E-06 51.2 4.7 37 56-92 144-180 (320)
299 3l8k_A Dihydrolipoyl dehydroge 93.9 0.062 2.1E-06 53.7 5.7 35 57-91 172-206 (466)
300 2gv8_A Monooxygenase; FMO, FAD 93.9 0.049 1.7E-06 54.1 4.9 37 56-92 211-248 (447)
301 1lld_A L-lactate dehydrogenase 93.8 0.059 2E-06 50.8 5.1 34 57-90 7-42 (319)
302 3dk9_A Grase, GR, glutathione 93.8 0.059 2E-06 54.0 5.4 36 57-92 187-222 (478)
303 1ks9_A KPA reductase;, 2-dehyd 93.8 0.062 2.1E-06 49.8 5.1 33 58-90 1-33 (291)
304 3oc4_A Oxidoreductase, pyridin 93.7 0.068 2.3E-06 53.1 5.7 37 57-93 147-183 (452)
305 2vdc_G Glutamate synthase [NAD 93.6 0.08 2.7E-06 52.6 5.8 46 479-526 406-451 (456)
306 3ghy_A Ketopantoate reductase 93.5 0.074 2.5E-06 50.5 5.2 33 57-89 3-35 (335)
307 2wpf_A Trypanothione reductase 93.5 0.067 2.3E-06 53.9 5.2 36 57-92 191-229 (495)
308 3gg2_A Sugar dehydrogenase, UD 93.5 0.059 2E-06 53.3 4.6 33 58-90 3-35 (450)
309 3g79_A NDP-N-acetyl-D-galactos 93.5 0.066 2.3E-06 53.1 4.9 36 56-91 17-54 (478)
310 3lad_A Dihydrolipoamide dehydr 93.4 0.083 2.8E-06 52.9 5.8 37 57-93 180-216 (476)
311 2ew2_A 2-dehydropantoate 2-red 93.4 0.07 2.4E-06 50.1 5.0 33 57-89 3-35 (316)
312 3itj_A Thioredoxin reductase 1 93.4 0.065 2.2E-06 50.7 4.7 37 56-92 172-208 (338)
313 3g17_A Similar to 2-dehydropan 93.4 0.062 2.1E-06 49.9 4.4 32 58-89 3-34 (294)
314 1zej_A HBD-9, 3-hydroxyacyl-CO 93.4 0.068 2.3E-06 49.3 4.6 34 56-90 11-44 (293)
315 1fec_A Trypanothione reductase 93.4 0.072 2.5E-06 53.6 5.2 37 57-93 187-226 (490)
316 3cty_A Thioredoxin reductase; 93.4 0.29 1E-05 45.8 9.2 54 275-329 193-251 (319)
317 3k96_A Glycerol-3-phosphate de 93.3 0.087 3E-06 50.3 5.2 34 56-89 28-61 (356)
318 4a7p_A UDP-glucose dehydrogena 93.2 0.084 2.9E-06 51.9 5.2 36 56-91 7-42 (446)
319 2hjr_A Malate dehydrogenase; m 93.2 0.097 3.3E-06 49.4 5.4 33 58-90 15-48 (328)
320 3hwr_A 2-dehydropantoate 2-red 93.2 0.075 2.6E-06 50.0 4.6 34 55-89 17-50 (318)
321 1mo9_A ORF3; nucleotide bindin 93.1 0.085 2.9E-06 53.6 5.2 36 58-93 215-250 (523)
322 4g65_A TRK system potassium up 93.1 0.035 1.2E-06 55.1 2.3 36 56-91 2-37 (461)
323 3pid_A UDP-glucose 6-dehydroge 93.1 0.075 2.6E-06 51.8 4.5 37 53-90 32-68 (432)
324 3ics_A Coenzyme A-disulfide re 93.0 0.094 3.2E-06 54.1 5.6 37 57-93 187-223 (588)
325 2vns_A Metalloreductase steap3 93.0 0.11 3.7E-06 45.7 5.2 35 56-90 27-61 (215)
326 3l9w_A Glutathione-regulated p 93.0 0.096 3.3E-06 51.1 5.3 36 56-91 3-38 (413)
327 1zcj_A Peroxisomal bifunctiona 93.0 0.11 3.7E-06 51.7 5.7 34 57-90 37-70 (463)
328 1x13_A NAD(P) transhydrogenase 93.0 0.098 3.4E-06 50.8 5.3 34 57-90 172-205 (401)
329 2v6b_A L-LDH, L-lactate dehydr 93.0 0.096 3.3E-06 48.8 5.0 33 58-90 1-35 (304)
330 1t2d_A LDH-P, L-lactate dehydr 93.0 0.11 3.8E-06 48.8 5.4 34 57-90 4-38 (322)
331 1xdi_A RV3303C-LPDA; reductase 92.9 0.11 3.7E-06 52.4 5.8 37 57-93 182-218 (499)
332 1hyu_A AHPF, alkyl hydroperoxi 92.9 0.072 2.5E-06 54.0 4.4 36 56-91 354-389 (521)
333 2ewd_A Lactate dehydrogenase,; 92.9 0.1 3.6E-06 48.9 5.1 34 57-90 4-38 (317)
334 3pef_A 6-phosphogluconate dehy 92.9 0.11 3.6E-06 48.1 5.1 33 58-90 2-34 (287)
335 3ego_A Probable 2-dehydropanto 92.7 0.096 3.3E-06 49.0 4.6 31 58-89 3-33 (307)
336 3dtt_A NADP oxidoreductase; st 92.7 0.13 4.3E-06 46.3 5.2 35 56-90 18-52 (245)
337 4dll_A 2-hydroxy-3-oxopropiona 92.6 0.11 3.7E-06 48.9 4.9 36 55-90 29-64 (320)
338 3oj0_A Glutr, glutamyl-tRNA re 92.6 0.05 1.7E-06 44.4 2.2 33 57-89 21-53 (144)
339 3f8d_A Thioredoxin reductase ( 92.6 0.12 4E-06 48.5 5.1 35 57-91 154-188 (323)
340 1mv8_A GMD, GDP-mannose 6-dehy 92.6 0.093 3.2E-06 51.8 4.5 33 58-90 1-33 (436)
341 4ffl_A PYLC; amino acid, biosy 92.5 0.13 4.5E-06 49.3 5.5 35 57-91 1-35 (363)
342 3g0o_A 3-hydroxyisobutyrate de 92.5 0.12 4.2E-06 48.1 5.1 35 56-90 6-40 (303)
343 1bg6_A N-(1-D-carboxylethyl)-L 92.5 0.12 4E-06 49.6 5.1 32 58-89 5-36 (359)
344 1z82_A Glycerol-3-phosphate de 92.5 0.12 4.2E-06 49.0 5.1 33 57-89 14-46 (335)
345 3iwa_A FAD-dependent pyridine 92.5 0.11 3.9E-06 51.9 5.1 37 57-93 159-196 (472)
346 1l7d_A Nicotinamide nucleotide 92.5 0.13 4.5E-06 49.7 5.4 35 56-90 171-205 (384)
347 3r9u_A Thioredoxin reductase; 92.5 0.12 4.2E-06 48.2 5.1 35 57-91 147-181 (315)
348 3dgh_A TRXR-1, thioredoxin red 92.3 0.16 5.5E-06 50.9 6.0 33 57-89 187-219 (483)
349 1nyt_A Shikimate 5-dehydrogena 92.3 0.15 5E-06 46.7 5.2 34 56-89 118-151 (271)
350 1cjc_A Protein (adrenodoxin re 92.3 0.13 4.4E-06 51.2 5.2 36 56-91 144-200 (460)
351 1jw9_B Molybdopterin biosynthe 92.3 0.12 3.9E-06 46.7 4.4 34 57-90 31-65 (249)
352 2h78_A Hibadh, 3-hydroxyisobut 92.2 0.12 4.2E-06 48.1 4.7 35 56-90 2-36 (302)
353 3pdu_A 3-hydroxyisobutyrate de 92.2 0.11 3.6E-06 48.1 4.2 33 58-90 2-34 (287)
354 1guz_A Malate dehydrogenase; o 92.2 0.14 4.9E-06 47.8 5.1 33 58-90 1-35 (310)
355 3gvi_A Malate dehydrogenase; N 92.2 0.16 5.6E-06 47.5 5.4 34 57-90 7-41 (324)
356 1pjc_A Protein (L-alanine dehy 92.2 0.15 5.2E-06 48.8 5.4 33 58-90 168-200 (361)
357 3mog_A Probable 3-hydroxybutyr 92.1 0.14 4.6E-06 51.1 5.0 34 57-90 5-38 (483)
358 3tl2_A Malate dehydrogenase; c 92.1 0.16 5.4E-06 47.4 5.2 33 57-89 8-41 (315)
359 4dna_A Probable glutathione re 92.0 0.17 5.7E-06 50.5 5.7 36 57-92 170-205 (463)
360 1jay_A Coenzyme F420H2:NADP+ o 92.0 0.16 5.4E-06 44.4 4.9 32 58-89 1-33 (212)
361 1ur5_A Malate dehydrogenase; o 92.0 0.17 5.8E-06 47.3 5.3 33 58-90 3-36 (309)
362 3o0h_A Glutathione reductase; 92.0 0.17 5.8E-06 50.7 5.7 36 57-92 191-226 (484)
363 1txg_A Glycerol-3-phosphate de 91.9 0.12 4.1E-06 49.0 4.3 31 58-88 1-31 (335)
364 3phh_A Shikimate dehydrogenase 91.9 0.19 6.4E-06 45.6 5.2 33 57-89 118-150 (269)
365 3qha_A Putative oxidoreductase 91.9 0.12 4.1E-06 48.0 4.2 35 57-91 15-49 (296)
366 2qrj_A Saccharopine dehydrogen 91.8 0.15 5.1E-06 48.7 4.7 40 56-95 213-257 (394)
367 1dlj_A UDP-glucose dehydrogena 91.8 0.12 4E-06 50.4 4.1 32 58-90 1-32 (402)
368 3l6d_A Putative oxidoreductase 91.8 0.25 8.4E-06 46.1 6.2 35 56-90 8-42 (306)
369 2eez_A Alanine dehydrogenase; 91.7 0.19 6.4E-06 48.3 5.4 34 57-90 166-199 (369)
370 1y6j_A L-lactate dehydrogenase 91.6 0.17 6E-06 47.3 5.0 33 57-89 7-41 (318)
371 3ldh_A Lactate dehydrogenase; 91.6 0.25 8.5E-06 46.2 5.9 34 56-89 20-55 (330)
372 4huj_A Uncharacterized protein 91.6 0.12 3.9E-06 45.7 3.5 33 57-89 23-56 (220)
373 4e21_A 6-phosphogluconate dehy 91.6 0.18 6.2E-06 48.1 5.1 35 56-90 21-55 (358)
374 1pjq_A CYSG, siroheme synthase 91.5 0.16 5.6E-06 50.3 4.8 33 57-89 12-44 (457)
375 3lzw_A Ferredoxin--NADP reduct 91.4 0.16 5.4E-06 47.9 4.6 35 57-91 154-188 (332)
376 1p77_A Shikimate 5-dehydrogena 91.4 0.15 5.3E-06 46.6 4.3 34 56-89 118-151 (272)
377 1oju_A MDH, malate dehydrogena 91.4 0.14 4.8E-06 47.2 4.0 33 58-90 1-35 (294)
378 2egg_A AROE, shikimate 5-dehyd 91.4 0.2 6.8E-06 46.5 5.0 34 56-89 140-174 (297)
379 1a5z_A L-lactate dehydrogenase 91.4 0.16 5.4E-06 47.7 4.4 32 58-89 1-34 (319)
380 2uyy_A N-PAC protein; long-cha 91.3 0.26 8.8E-06 46.2 5.9 34 57-90 30-63 (316)
381 4ezb_A Uncharacterized conserv 91.3 0.18 6.3E-06 47.2 4.8 34 57-90 24-58 (317)
382 3p7m_A Malate dehydrogenase; p 91.3 0.23 8E-06 46.5 5.4 34 57-90 5-39 (321)
383 3fbs_A Oxidoreductase; structu 91.2 0.46 1.6E-05 43.7 7.5 61 262-329 165-225 (297)
384 1hyh_A L-hicdh, L-2-hydroxyiso 91.2 0.17 5.9E-06 47.2 4.5 32 58-89 2-35 (309)
385 3qsg_A NAD-binding phosphogluc 91.2 0.17 5.7E-06 47.4 4.4 34 56-89 23-57 (312)
386 2i6t_A Ubiquitin-conjugating e 91.2 0.18 6.2E-06 46.8 4.5 34 57-90 14-49 (303)
387 3gpi_A NAD-dependent epimerase 91.1 0.26 8.9E-06 45.3 5.5 34 57-90 3-36 (286)
388 2vhw_A Alanine dehydrogenase; 91.0 0.24 8.1E-06 47.7 5.4 35 56-90 167-201 (377)
389 1edz_A 5,10-methylenetetrahydr 91.0 0.2 6.8E-06 46.5 4.5 34 56-89 176-210 (320)
390 2wtb_A MFP2, fatty acid multif 90.9 0.22 7.5E-06 52.4 5.4 34 57-90 312-345 (725)
391 3dfu_A Uncharacterized protein 90.9 0.077 2.6E-06 46.9 1.6 34 56-89 5-38 (232)
392 4a9w_A Monooxygenase; baeyer-v 90.9 0.18 6.1E-06 48.0 4.4 33 56-89 162-194 (357)
393 2qyt_A 2-dehydropantoate 2-red 90.8 0.14 4.9E-06 48.0 3.5 32 57-88 8-45 (317)
394 4aj2_A L-lactate dehydrogenase 90.8 0.3 1E-05 45.9 5.6 35 55-89 17-53 (331)
395 3pqe_A L-LDH, L-lactate dehydr 90.8 0.23 7.7E-06 46.6 4.8 33 57-89 5-39 (326)
396 3ew7_A LMO0794 protein; Q8Y8U8 90.7 0.27 9.4E-06 43.0 5.2 32 58-89 1-33 (221)
397 2q3e_A UDP-glucose 6-dehydroge 90.7 0.19 6.5E-06 50.0 4.5 34 57-90 5-40 (467)
398 3nep_X Malate dehydrogenase; h 90.7 0.21 7.2E-06 46.5 4.5 33 58-90 1-35 (314)
399 2f1k_A Prephenate dehydrogenas 90.7 0.25 8.5E-06 45.4 5.0 32 58-89 1-32 (279)
400 1o94_A Tmadh, trimethylamine d 90.7 0.2 7E-06 53.0 4.9 35 56-90 527-563 (729)
401 3h8v_A Ubiquitin-like modifier 90.6 0.19 6.4E-06 46.2 4.0 35 56-90 35-70 (292)
402 1m6i_A Programmed cell death p 90.6 0.21 7.2E-06 50.2 4.8 36 57-92 180-219 (493)
403 2o3j_A UDP-glucose 6-dehydroge 90.6 0.22 7.7E-06 49.7 4.8 34 57-90 9-44 (481)
404 3don_A Shikimate dehydrogenase 90.5 0.21 7.2E-06 45.6 4.2 35 56-90 116-151 (277)
405 3rui_A Ubiquitin-like modifier 90.5 0.28 9.5E-06 46.0 5.1 35 56-90 33-68 (340)
406 1yqg_A Pyrroline-5-carboxylate 90.4 0.23 7.8E-06 45.1 4.4 32 58-89 1-33 (263)
407 2rir_A Dipicolinate synthase, 90.4 0.3 1E-05 45.4 5.3 35 56-90 156-190 (300)
408 3h2s_A Putative NADH-flavin re 90.3 0.3 1E-05 42.9 5.1 32 58-89 1-33 (224)
409 1zud_1 Adenylyltransferase THI 90.3 0.27 9.2E-06 44.3 4.7 34 57-90 28-62 (251)
410 1evy_A Glycerol-3-phosphate de 90.2 0.2 6.8E-06 48.1 4.0 31 59-89 17-47 (366)
411 2gf2_A Hibadh, 3-hydroxyisobut 90.2 0.27 9.1E-06 45.6 4.7 33 58-90 1-33 (296)
412 3d4o_A Dipicolinate synthase s 90.1 0.33 1.1E-05 44.9 5.3 35 56-90 154-188 (293)
413 4gwg_A 6-phosphogluconate dehy 90.1 0.29 1E-05 48.5 5.2 35 56-90 3-37 (484)
414 3ius_A Uncharacterized conserv 90.1 0.25 8.6E-06 45.4 4.5 34 57-90 5-38 (286)
415 1lqt_A FPRA; NADP+ derivative, 90.1 0.27 9.4E-06 48.7 5.0 36 56-91 146-202 (456)
416 2aef_A Calcium-gated potassium 90.1 0.13 4.6E-06 45.8 2.5 35 56-91 8-42 (234)
417 2cvz_A Dehydrogenase, 3-hydrox 90.0 0.24 8.3E-06 45.6 4.3 31 58-89 2-32 (289)
418 3c24_A Putative oxidoreductase 90.0 0.31 1.1E-05 44.9 5.1 34 57-90 11-45 (286)
419 3zwc_A Peroxisomal bifunctiona 90.0 0.35 1.2E-05 50.8 5.9 35 56-90 315-349 (742)
420 2pv7_A T-protein [includes: ch 90.0 0.34 1.2E-05 44.9 5.3 34 57-90 21-55 (298)
421 2hk9_A Shikimate dehydrogenase 90.0 0.25 8.7E-06 45.2 4.3 34 56-89 128-161 (275)
422 3tnl_A Shikimate dehydrogenase 89.9 0.35 1.2E-05 45.0 5.3 34 56-89 153-187 (315)
423 2g5c_A Prephenate dehydrogenas 89.9 0.33 1.1E-05 44.6 5.1 32 58-89 2-35 (281)
424 3fi9_A Malate dehydrogenase; s 89.9 0.34 1.2E-05 45.7 5.2 34 56-89 7-43 (343)
425 2dvm_A Malic enzyme, 439AA lon 89.9 0.31 1.1E-05 47.5 5.0 32 56-87 185-219 (439)
426 3cky_A 2-hydroxymethyl glutara 89.9 0.28 9.6E-06 45.6 4.7 33 57-89 4-36 (301)
427 1vpd_A Tartronate semialdehyde 89.9 0.27 9.2E-06 45.6 4.5 32 58-89 6-37 (299)
428 1gte_A Dihydropyrimidine dehyd 89.8 0.26 8.8E-06 54.4 5.0 33 58-90 333-366 (1025)
429 2gag_A Heterotetrameric sarcos 89.8 0.19 6.6E-06 55.0 4.0 36 57-92 284-319 (965)
430 3u62_A Shikimate dehydrogenase 89.8 0.37 1.3E-05 43.3 5.2 34 56-90 108-142 (253)
431 3fbt_A Chorismate mutase and s 89.8 0.33 1.1E-05 44.4 4.8 35 56-90 121-156 (282)
432 3pwz_A Shikimate dehydrogenase 89.7 0.37 1.3E-05 43.9 5.2 34 56-89 119-153 (272)
433 3jyo_A Quinate/shikimate dehyd 89.7 0.38 1.3E-05 44.1 5.2 34 56-89 126-160 (283)
434 2zyd_A 6-phosphogluconate dehy 89.7 0.28 9.7E-06 48.8 4.7 35 56-90 14-48 (480)
435 3ggo_A Prephenate dehydrogenas 89.7 0.34 1.2E-05 45.3 5.0 33 57-89 33-67 (314)
436 1kdg_A CDH, cellobiose dehydro 89.7 0.41 1.4E-05 48.8 6.0 38 55-92 5-42 (546)
437 2ahr_A Putative pyrroline carb 89.6 0.29 9.8E-06 44.3 4.4 33 57-89 3-35 (259)
438 1yj8_A Glycerol-3-phosphate de 89.6 0.22 7.7E-06 48.0 3.8 34 58-91 22-62 (375)
439 3vku_A L-LDH, L-lactate dehydr 89.5 0.34 1.2E-05 45.3 4.8 34 56-89 8-43 (326)
440 3ktd_A Prephenate dehydrogenas 89.5 0.41 1.4E-05 45.2 5.4 34 56-89 7-40 (341)
441 2x0j_A Malate dehydrogenase; o 89.4 0.29 9.8E-06 45.1 4.2 33 58-90 1-35 (294)
442 2izz_A Pyrroline-5-carboxylate 89.4 0.35 1.2E-05 45.5 4.9 34 56-89 21-58 (322)
443 1w4x_A Phenylacetone monooxyge 89.4 0.37 1.3E-05 49.0 5.5 36 56-91 185-220 (542)
444 3o8q_A Shikimate 5-dehydrogena 89.4 0.4 1.4E-05 43.9 5.1 34 56-89 125-159 (281)
445 3ond_A Adenosylhomocysteinase; 89.4 0.38 1.3E-05 47.4 5.2 35 56-90 264-298 (488)
446 1wdk_A Fatty oxidation complex 89.4 0.29 1E-05 51.4 4.7 35 56-90 313-347 (715)
447 1nvt_A Shikimate 5'-dehydrogen 89.3 0.29 9.8E-06 45.2 4.2 32 57-89 128-159 (287)
448 3k30_A Histamine dehydrogenase 89.3 0.37 1.3E-05 50.7 5.5 37 56-92 522-560 (690)
449 4g6h_A Rotenone-insensitive NA 89.3 0.25 8.6E-06 49.7 4.0 37 58-94 218-268 (502)
450 2zqz_A L-LDH, L-lactate dehydr 89.3 0.36 1.2E-05 45.3 4.8 35 55-89 7-43 (326)
451 4id9_A Short-chain dehydrogena 89.2 0.38 1.3E-05 45.6 5.1 38 54-91 16-54 (347)
452 1yb4_A Tartronic semialdehyde 89.2 0.23 7.9E-06 46.0 3.5 33 57-90 3-35 (295)
453 2p4q_A 6-phosphogluconate dehy 89.0 0.41 1.4E-05 47.9 5.3 34 57-90 10-43 (497)
454 2rcy_A Pyrroline carboxylate r 89.0 0.33 1.1E-05 44.0 4.3 35 57-91 4-42 (262)
455 1hdo_A Biliverdin IX beta redu 89.0 0.45 1.5E-05 41.0 5.1 33 58-90 4-37 (206)
456 2pgd_A 6-phosphogluconate dehy 89.0 0.38 1.3E-05 48.1 5.0 33 58-90 3-35 (482)
457 1x0v_A GPD-C, GPDH-C, glycerol 88.9 0.21 7.3E-06 47.6 3.1 34 58-91 9-49 (354)
458 1leh_A Leucine dehydrogenase; 88.9 0.44 1.5E-05 45.3 5.2 34 56-89 172-205 (364)
459 1a4i_A Methylenetetrahydrofola 88.9 0.41 1.4E-05 43.7 4.7 34 56-89 164-198 (301)
460 3gt0_A Pyrroline-5-carboxylate 88.9 0.45 1.5E-05 42.7 5.1 33 58-90 3-39 (247)
461 3t4e_A Quinate/shikimate dehyd 88.9 0.48 1.7E-05 44.0 5.3 34 56-89 147-181 (312)
462 3c7a_A Octopine dehydrogenase; 88.9 0.22 7.6E-06 48.5 3.3 30 58-87 3-33 (404)
463 3nv9_A Malic enzyme; rossmann 88.8 0.37 1.3E-05 46.5 4.5 36 56-91 218-256 (487)
464 1pgj_A 6PGDH, 6-PGDH, 6-phosph 88.8 0.37 1.3E-05 48.1 4.8 33 58-90 2-34 (478)
465 3dhn_A NAD-dependent epimerase 88.7 0.38 1.3E-05 42.4 4.4 34 57-90 4-38 (227)
466 4b4o_A Epimerase family protei 88.7 0.51 1.7E-05 43.6 5.5 32 58-89 1-33 (298)
467 1ldn_A L-lactate dehydrogenase 88.6 0.44 1.5E-05 44.6 5.0 34 56-89 5-40 (316)
468 2d5c_A AROE, shikimate 5-dehyd 88.6 0.49 1.7E-05 42.9 5.2 31 59-89 118-148 (263)
469 1mld_A Malate dehydrogenase; o 88.6 0.38 1.3E-05 44.9 4.5 33 58-90 1-36 (314)
470 4a26_A Putative C-1-tetrahydro 88.5 0.49 1.7E-05 43.3 5.0 34 56-89 164-198 (300)
471 3d0o_A L-LDH 1, L-lactate dehy 88.5 0.41 1.4E-05 44.8 4.7 33 57-89 6-40 (317)
472 3ojo_A CAP5O; rossmann fold, c 88.5 0.32 1.1E-05 47.5 4.0 34 58-91 12-45 (431)
473 4hv4_A UDP-N-acetylmuramate--L 88.5 0.32 1.1E-05 48.8 4.1 35 56-90 21-56 (494)
474 3h5n_A MCCB protein; ubiquitin 88.4 0.4 1.4E-05 45.5 4.6 34 57-90 118-152 (353)
475 3d1l_A Putative NADP oxidoredu 88.4 0.35 1.2E-05 43.9 4.1 34 57-90 10-44 (266)
476 3tri_A Pyrroline-5-carboxylate 88.4 0.56 1.9E-05 43.0 5.4 34 57-90 3-39 (280)
477 1i36_A Conserved hypothetical 88.3 0.38 1.3E-05 43.6 4.3 31 58-88 1-31 (264)
478 2pzm_A Putative nucleotide sug 88.3 0.54 1.8E-05 44.2 5.5 35 56-90 19-54 (330)
479 3ngx_A Bifunctional protein fo 88.3 0.49 1.7E-05 42.6 4.7 33 56-88 149-182 (276)
480 1np3_A Ketol-acid reductoisome 88.1 0.53 1.8E-05 44.5 5.2 34 57-90 16-49 (338)
481 1ez4_A Lactate dehydrogenase; 88.1 0.42 1.4E-05 44.7 4.4 34 56-89 4-39 (318)
482 3gvp_A Adenosylhomocysteinase 88.0 0.49 1.7E-05 45.7 4.9 35 56-90 219-253 (435)
483 1lu9_A Methylene tetrahydromet 88.0 0.59 2E-05 43.0 5.3 34 56-89 118-152 (287)
484 1npy_A Hypothetical shikimate 87.9 0.52 1.8E-05 42.9 4.8 33 57-89 119-152 (271)
485 1b0a_A Protein (fold bifunctio 87.8 0.52 1.8E-05 42.7 4.7 33 56-88 158-191 (288)
486 3vh1_A Ubiquitin-like modifier 87.7 0.5 1.7E-05 47.7 4.9 35 56-90 326-361 (598)
487 4gsl_A Ubiquitin-like modifier 87.6 0.55 1.9E-05 47.5 5.1 36 56-91 325-361 (615)
488 3vps_A TUNA, NAD-dependent epi 87.1 0.71 2.4E-05 43.0 5.5 36 56-91 6-42 (321)
489 3dqp_A Oxidoreductase YLBE; al 87.1 0.54 1.8E-05 41.1 4.4 33 58-90 1-34 (219)
490 1y1p_A ARII, aldehyde reductas 87.0 0.95 3.2E-05 42.6 6.4 35 55-89 9-44 (342)
491 3p2o_A Bifunctional protein fo 87.0 0.64 2.2E-05 42.1 4.7 34 56-89 159-193 (285)
492 3r6d_A NAD-dependent epimerase 87.0 0.77 2.6E-05 40.2 5.3 32 59-90 7-40 (221)
493 3fpz_A Thiazole biosynthetic e 87.0 0.42 1.4E-05 45.0 3.8 41 479-519 280-325 (326)
494 3ce6_A Adenosylhomocysteinase; 86.9 0.65 2.2E-05 46.1 5.2 35 56-90 273-307 (494)
495 1gpj_A Glutamyl-tRNA reductase 86.9 0.55 1.9E-05 45.7 4.7 35 56-90 166-201 (404)
496 4a5o_A Bifunctional protein fo 86.9 0.71 2.4E-05 41.8 5.0 33 56-88 160-193 (286)
497 2dbq_A Glyoxylate reductase; D 86.9 0.73 2.5E-05 43.4 5.3 36 56-91 149-184 (334)
498 1smk_A Malate dehydrogenase, g 86.8 0.46 1.6E-05 44.7 3.9 35 56-90 7-44 (326)
499 4gbj_A 6-phosphogluconate dehy 86.8 0.47 1.6E-05 43.9 3.9 32 59-90 7-38 (297)
500 2d4a_B Malate dehydrogenase; a 86.8 0.56 1.9E-05 43.6 4.4 31 59-89 1-32 (308)
No 1
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=1.1e-40 Score=344.24 Aligned_cols=434 Identities=18% Similarity=0.214 Sum_probs=283.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCccc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~ 135 (536)
.++||+|||||++||+||+.|++.|++|+|||+++++||++.+.....|+.+|.|++++.+.+..+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 35799999999999999999999999999999999999999987643489999999999877778899999999875433
Q ss_pred ccccceeeeccCCCCccccccCCCCCCcc-----hhHHHHHHhcCCCCChhHHHHhhcccchh-hhcccccccccccccH
Q 009372 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAP-----LNGILAILRNNEMLTWPEKVKFAIGLLPA-IIGGQAYVEAQDGLTV 209 (536)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~ 209 (536)
+.....++... +.. +.+...+|.. ...+..++. .+......... ...........+..++
T Consensus 83 ~~~~~~~~~~~---g~~--~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (520)
T 1s3e_A 83 NEVERLIHHVK---GKS--YPFRGPFPPVWNPITYLDHNNFWR---------TMDDMGREIPSDAPWKAPLAEEWDNMTM 148 (520)
T ss_dssp CCSSEEEEEET---TEE--EEECSSSCCCCSHHHHHHHHHHHH---------HHHHHHTTSCTTCGGGSTTHHHHHTSBH
T ss_pred ccCCceEEEEC---CEE--EEecCCCCCCCCHHHHHHHHHHHH---------HHHHHHhhcCcCCCccccchhhhhccCH
Confidence 22222222111 111 1111112210 001111111 00000000000 0000001112356899
Q ss_pred HHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH------hhhcCCCeEEEecCCCCccchHHHHHHHH
Q 009372 210 QEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLPIVEHIQ 283 (536)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~gg~~~~l~~~l~~~l~ 283 (536)
.+|+++....+ ..+.++..+....++.+++++++......+... +....+....++.|| ++.+++.|.+.+
T Consensus 149 ~~~l~~~~~~~-~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l- 225 (520)
T 1s3e_A 149 KELLDKLCWTE-SAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG-SGQVSERIMDLL- 225 (520)
T ss_dssp HHHHHHHCSSH-HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC-THHHHHHHHHHH-
T ss_pred HHHHHhhCCCH-HHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC-HHHHHHHHHHHc-
Confidence 99999986654 446777877777778899999988765443221 111123334556666 788888888765
Q ss_pred HcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEEe
Q 009372 284 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWV 363 (536)
Q Consensus 284 ~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 363 (536)
|++|++|++|++|..+++ .+ .|++.+|+++.||+||+|+|++.+.+++..+.+|....++++++.+.+..++++.
T Consensus 226 --g~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~- 300 (520)
T 1s3e_A 226 --GDRVKLERPVIYIDQTRE-NV-LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVY- 300 (520)
T ss_dssp --GGGEESSCCEEEEECSSS-SE-EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEE-
T ss_pred --CCcEEcCCeeEEEEECCC-eE-EEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEE-
Confidence 689999999999987544 44 3888899899999999999999988887554556666788889998888888877
Q ss_pred eeccccCcccccccCcccc--ccCCcceeeeccccCcccccCCCccEEEEEEec--chhhccCChHHHHHHHHHHHHHhC
Q 009372 364 FFNCRFDRKLKNTYDHLLF--SRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLF 439 (536)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ee~~~~~~~~L~~~~ 439 (536)
|+++||+.. .+.+..+ ..+......++.+. .+.+..++..+... +..|..++++++++.++++|+++|
T Consensus 301 -~~~~~w~~~--~~~g~~~~~~~~~~~~~~~d~~~-----~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~ 372 (520)
T 1s3e_A 301 -YKEPFWRKK--DYCGTMIIDGEEAPVAYTLDDTK-----PEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVL 372 (520)
T ss_dssp -CSSCGGGGG--TEEEEEEECSTTCSCSEEEECCC-----TTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred -eCCCcccCC--CCCceeeccCCCCceEEEeeCCC-----CCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHh
Confidence 788877643 1222222 11112222223221 12222444433332 367888899999999999999999
Q ss_pred CCCcccccccceEEEEEEeecCCc--ccc--cCCCC-CCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHH
Q 009372 440 PDEISADQSKAKIVKYHVVKTPRS--VYK--TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 514 (536)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~p~~--~~~--~~~~~-~~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~l 514 (536)
|......+. .+..+.|...|+. .+. +.++. ....+.+++|++||||||++++..|+|+++||++||++||++|
T Consensus 373 ~~~~~~~p~--~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i 450 (520)
T 1s3e_A 373 GSLEALEPV--HYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI 450 (520)
T ss_dssp TCGGGGCCS--EEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHH
T ss_pred CccccCCcc--EEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHH
Confidence 863111111 2334444444443 332 23332 1234457789999999999998877899999999999999999
Q ss_pred HHHHHHH
Q 009372 515 VQDYVLL 521 (536)
Q Consensus 515 l~~l~~~ 521 (536)
++.++..
T Consensus 451 ~~~l~~~ 457 (520)
T 1s3e_A 451 LHAMGKI 457 (520)
T ss_dssp HHHTTSS
T ss_pred HHHHhcC
Confidence 9988654
No 2
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=5.4e-38 Score=316.63 Aligned_cols=416 Identities=18% Similarity=0.253 Sum_probs=283.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeec--cCcchHHHHHHHhCCCCccc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFF--GAYPNIQNLFGELGINDRLQ 135 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~--~~~~~~~~l~~~lg~~~~~~ 135 (536)
+||+|||||++||+||++|+++|++|+|||+++++||++.++. .+|+.+|.|++.+. .....+.++++++|++....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIV 79 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEE
Confidence 5999999999999999999999999999999999999999875 57899999986554 23456889999999876543
Q ss_pred ccccceeee-ccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHHHH
Q 009372 136 WKEHSMIFA-MPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (536)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (536)
......... ..+....+. ... ....... ....+.+.++.+....+.... . ...+..++.+|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~s~~~~l~ 143 (425)
T 3ka7_A 80 RSEMTTVRVPLKKGNPDYV---KGF-KDISFND------FPSLLSYKDRMKIALLIVSTR----K--NRPSGSSLQAWIK 143 (425)
T ss_dssp ECCCCEEEEESSTTCCSST---TCE-EEEEGGG------GGGGSCHHHHHHHHHHHHHTT----T--SCCCSSBHHHHHH
T ss_pred ecCCceEEeecCCCccccc---ccc-cceehhh------hhhhCCHHHHHHHHHHHHhhh----h--cCCCCCCHHHHHH
Confidence 322111111 111100000 000 0000000 001122223222221111000 0 1224689999999
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhcCCCeEEEecCCCCccchHHHHHHHHHcCcEEEeCcc
Q 009372 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSR 294 (536)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~ 294 (536)
+. +..+..+.++.++....++.+++++++......+..... .+. ..++.|| +..+++.|.+.++++|++|+++++
T Consensus 144 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~ 218 (425)
T 3ka7_A 144 SQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR--FGG-TGIPEGG-CKGIIDALETVISANGGKIHTGQE 218 (425)
T ss_dssp HH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTS-HHHHHHHHHHHHHHTTCEEECSCC
T ss_pred Hh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh--cCC-ccccCCC-HHHHHHHHHHHHHHcCCEEEECCc
Confidence 87 566777788888877777889999998766655554321 222 2456666 789999999999999999999999
Q ss_pred eEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCc-ch--hcHHHHHHhccCCccEEEEEEEeeeccccCc
Q 009372 295 VQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN-WK--EMAYFKRLEKLVGVPVINIHIWVFFNCRFDR 371 (536)
Q Consensus 295 V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~-~~--~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~ 371 (536)
|++|..+ ++++++|++. |+++.||.||+|+|++.+.+|+++. .. +..+.+.++++.+.+.+++++. |+++++.
T Consensus 219 V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~--~~~~~~~ 294 (425)
T 3ka7_A 219 VSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLA--ADEPLVG 294 (425)
T ss_dssp EEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEE--ESSCSSC
T ss_pred eeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEee--cCCCccC
Confidence 9999984 5566667775 7789999999999999999998743 22 5567788888888888888877 4443321
Q ss_pred ccccccCccccccC--CcceeeeccccCcccccCCCccEEEEEEecchhhccCChHHHHHHHHHHHHHhCCCCccccccc
Q 009372 372 KLKNTYDHLLFSRS--SLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSK 449 (536)
Q Consensus 372 ~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~ 449 (536)
...+.+..+ .+.. +..+|..++.++|++++++.+......++... .++.++.++++|++++|.. ..
T Consensus 295 -----~~~~~~~~~~~~~~~-~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~-~~---- 362 (425)
T 3ka7_A 295 -----HTGVLLTPYTRRING-VNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGK-RY---- 362 (425)
T ss_dssp -----SSSEEECCSSSSEEE-EECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTC-CE----
T ss_pred -----cCEEEECCChhhcce-EEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCC-ce----
Confidence 222333322 2222 34567788889988988776544332222222 2455799999999999862 21
Q ss_pred ceEEEEEEeecCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHH
Q 009372 450 AKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 515 (536)
Q Consensus 450 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll 515 (536)
.+ ..+..|+.+++.+.++.. .++...+|++|||+||+++.+.+..++++|+.||++||++|+
T Consensus 363 -~~--~~v~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 363 -EV--LLIQSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp -EE--EEEEEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred -EE--EEEEEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 12 255678888888777743 456778999999999999999666799999999999999986
No 3
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=3.7e-39 Score=331.26 Aligned_cols=428 Identities=15% Similarity=0.111 Sum_probs=277.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCcccc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~~ 136 (536)
.+||+|||||++||+||+.|++.|++|+|||+++++||++.+.. .+|+.+|.|++++.+.++++.++++++|+...+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~ 117 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSP 117 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcceeec
Confidence 48999999999999999999999999999999999999999876 47899999999998888899999999998654332
Q ss_pred cc----cceeeeccCCCCccccccCCCCCCcc--hhHHH----HHHhcCCCCChhHHHHhhcccch--hhhccccccccc
Q 009372 137 KE----HSMIFAMPNKPGEFSRFDFPEVLPAP--LNGIL----AILRNNEMLTWPEKVKFAIGLLP--AIIGGQAYVEAQ 204 (536)
Q Consensus 137 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 204 (536)
.. ....+......+.... ++.. ...+. .++.... . ....+.. ............
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~ 183 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTY------MTHEAEDELLRSALHKFTNVDG-T-------NGRTVLPFPHDMFYVPEFRKY 183 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEE------ECHHHHHHHHHHHHHHHHCSSS-S-------TTTTTCSCTTSTTSSTTHHHH
T ss_pred ccccCCCceEEEecCCCCceee------cCHHHHHHHHHHHHHHHHccch-h-------hhhhcCCCCCCcccCcchhhh
Confidence 21 1111111110011111 1110 00111 1111000 0 0000000 000000112234
Q ss_pred ccccHHHHHHHcC--CChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhh----cCCCeEEEecCCCCccchHHH
Q 009372 205 DGLTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLCLPI 278 (536)
Q Consensus 205 ~~~s~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~gg~~~~l~~~l 278 (536)
+..++.+|+++.+ +++. ...++..+....++.+++++++...+..+...... ........+.|| +..+++.|
T Consensus 184 ~~~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG-~~~l~~~l 261 (495)
T 2vvm_A 184 DEMSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDG-QSAFARRF 261 (495)
T ss_dssp HTSBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTC-HHHHHHHH
T ss_pred hhhhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCC-HHHHHHHH
Confidence 5689999999876 5654 45678888887778889999987766543221000 001112234555 78999999
Q ss_pred HHHHHHcC-cEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEE
Q 009372 279 VEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 357 (536)
Q Consensus 279 ~~~l~~~G-~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~ 357 (536)
.+.+.+.| ++|+++++|++|..++++ + .|++.+|++++||+||+|+|+..+.+++..+.+|....++++.+.+.+..
T Consensus 262 ~~~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~ 339 (495)
T 2vvm_A 262 WEEAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCT 339 (495)
T ss_dssp HHHHHTTTCEEEESSCCEEEEEECSSS-E-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCE
T ss_pred HHHhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCcee
Confidence 99999998 999999999999985444 3 48888888899999999999999888864444565667888889998988
Q ss_pred EEEEEeeeccccCcccccccCccccccCCcceeeeccccCcccccCCCccEEEEEEecchhhccCChHHHHHHHHHHHHH
Q 009372 358 NIHIWVFFNCRFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAK 437 (536)
Q Consensus 358 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~ 437 (536)
++++. |+.++|+. +.+....+.++..++.+. ..+.+..++..+..... .+++++..+.++++|++
T Consensus 340 kv~l~--~~~~~~~~----~~g~~~~~~~~~~~~~~~------~~~~~~~vl~~~~~~~~---~~~~~e~~~~~~~~L~~ 404 (495)
T 2vvm_A 340 KVHAE--VDNKDMRS----WTGIAYPFNKLCYAIGDG------TTPAGNTHLVCFGNSAN---HIQPDEDVRETLKAVGQ 404 (495)
T ss_dssp EEEEE--ESCGGGGG----EEEEECSSCSSCEEEEEE------ECTTSCEEEEEEECSTT---CCCTTTCHHHHHHHHHT
T ss_pred EEEEE--ECCccCCC----ceeEecCCCCcEEEecCC------CCCCCCeEEEEEeCccc---cCCCHHHHHHHHHHHHH
Confidence 88877 77766643 223333333433333211 12334344444332222 24566778889999999
Q ss_pred hCCCCcccccccceEEEEEEeecCCcc--cc-cCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHH
Q 009372 438 LFPDEISADQSKAKIVKYHVVKTPRSV--YK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 513 (536)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~-~~~~~~-~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ 513 (536)
++|....+ ..+..++|...|++. |. +.++.. ...+.+.+|.+||||||++++..|++++|||++||++||++
T Consensus 405 ~~~~~~~~----~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~ 480 (495)
T 2vvm_A 405 LAPGTFGV----KRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARV 480 (495)
T ss_dssp TSTTSCCE----EEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHH
T ss_pred hcCCCCCc----eEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHH
Confidence 98752111 123334444445532 22 233421 22445567899999999999987889999999999999999
Q ss_pred HHHHHHHHH
Q 009372 514 IVQDYVLLA 522 (536)
Q Consensus 514 ll~~l~~~~ 522 (536)
|++.++.+.
T Consensus 481 i~~~l~~~~ 489 (495)
T 2vvm_A 481 VLEELGTKR 489 (495)
T ss_dssp HHHHHCCC-
T ss_pred HHHHhcccc
Confidence 999886653
No 4
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1.4e-38 Score=323.36 Aligned_cols=428 Identities=16% Similarity=0.156 Sum_probs=273.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCcccc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~~~ 136 (536)
++||+|||||++||+||+.|++.|++|+|+|+++++||++.+... .|..+|.|++++......+.++++++|+.....+
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQTALISLLDELGLKTFERY 83 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTCHHHHHHHHHTTCCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCccHHHHHHHHHcCCcccccc
Confidence 579999999999999999999999999999999999999988764 6888999999988777788999999998754433
Q ss_pred cccceeeeccCCCCccccccCCCCCC-cc---hhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHH
Q 009372 137 KEHSMIFAMPNKPGEFSRFDFPEVLP-AP---LNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (536)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (536)
.....++... ++... .+....+ .. ...+..++. ....+. ..+..............+..++.+|
T Consensus 84 ~~~~~~~~~~--~g~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~ 151 (453)
T 2yg5_A 84 REGESVYISS--AGERT--RYTGDSFPTNETTKKEMDRLID------EMDDLA--AQIGAEEPWAHPLARDLDTVSFKQW 151 (453)
T ss_dssp CCSEEEEECT--TSCEE--EECSSSCSCCHHHHHHHHHHHH------HHHHHH--HHHCSSCGGGSTTHHHHHSSBHHHH
T ss_pred cCCCEEEEeC--CCcee--eccCCCCCCChhhHHHHHHHHH------HHHHHH--hhcCCCCCCCCcchhhhhhccHHHH
Confidence 3322222221 11111 1111111 11 111111110 000000 0000000000011112356899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCc-cccHHHHHHHHHHHhh-----hcCCCeEEEecCCCCccchHHHHHHHHHcC
Q 009372 213 MRKQGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRFLQ-----EKHGSKMAFLDGNPPERLCLPIVEHIQSLG 286 (536)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G 286 (536)
+++.+..+ ....++..+....++.+++ ++++...+..+...-. ...+....++.|| ++.+++.|++.+ |
T Consensus 152 l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l---g 226 (453)
T 2yg5_A 152 LINQSDDA-EARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGG-MQQVSIRMAEAL---G 226 (453)
T ss_dssp HHHHCSCH-HHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTC-THHHHHHHHHHH---G
T ss_pred HHhhcCCH-HHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCC-hHHHHHHHHHhc---C
Confidence 99986654 4556777777677778888 8998776544322100 0001223455665 788888888765 6
Q ss_pred cEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEEeeec
Q 009372 287 GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWVFFN 366 (536)
Q Consensus 287 ~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~ 366 (536)
++|++|++|++|..++++.+ .|++ +|+++.||+||+|+|++++.+|+..+.+|....++++++.+.++.++.+. |+
T Consensus 227 ~~i~~~~~V~~i~~~~~~~v-~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~--~~ 302 (453)
T 2yg5_A 227 DDVFLNAPVRTVKWNESGAT-VLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAV--YE 302 (453)
T ss_dssp GGEECSCCEEEEEEETTEEE-EEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEE--ES
T ss_pred CcEEcCCceEEEEEeCCceE-EEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEE--EC
Confidence 89999999999997543313 3665 67789999999999999988887555556666778888888888888876 88
Q ss_pred cccCcccccccCccccc-cCCcceeeeccccCcccccCCC-ccEEEEEEec--chhhccCChHHHHHHHHHHHHHhCCCC
Q 009372 367 CRFDRKLKNTYDHLLFS-RSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDE 442 (536)
Q Consensus 367 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~ee~~~~~~~~L~~~~~~~ 442 (536)
++||+.. ...+..+. +.++. ..++.+ .+++ ..++..+..+ +..|..++++++++.++++|+++||..
T Consensus 303 ~~~w~~~--~~~g~~~~~~~~~~-~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~ 373 (453)
T 2yg5_A 303 TPFWRED--GLSGTGFGASEVVQ-EVYDNT------NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPK 373 (453)
T ss_dssp SCGGGGG--TEEEEEECTTSSSC-EEEECC------CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGG
T ss_pred CCCCCCC--CCCceeecCCCCeE-EEEeCC------CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCcc
Confidence 8887643 12222222 22322 222322 1222 2344333322 366878899999999999999999853
Q ss_pred cccccccceEEEEEEeecCC--cccc--cCCC-CCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHH
Q 009372 443 ISADQSKAKIVKYHVVKTPR--SVYK--TIPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 517 (536)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~p~--~~~~--~~~~-~~~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~ 517 (536)
... + ..+..++|...|+ +.|. +.++ .....+.+++|++||||||++++..|+|+++||+.||++||++|++.
T Consensus 374 ~~~-p--~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 450 (453)
T 2yg5_A 374 AEE-P--VVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIAR 450 (453)
T ss_dssp GGC-C--SEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCC-c--cEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHH
Confidence 211 1 1222333433334 2222 2334 11223457789999999999998877889999999999999999986
Q ss_pred H
Q 009372 518 Y 518 (536)
Q Consensus 518 l 518 (536)
|
T Consensus 451 l 451 (453)
T 2yg5_A 451 S 451 (453)
T ss_dssp C
T ss_pred h
Confidence 5
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=9.8e-38 Score=319.17 Aligned_cols=425 Identities=18% Similarity=0.235 Sum_probs=277.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC------CceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAG------HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g------~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~ 130 (536)
++||+|||||++||+||++|+++| ++|+|||+++++||++.+.. ..|+.+|.|++++...++.+.++++++|+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KDGYIIERGPDSFLERKKSAPQLVKDLGL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CTTCCEESSCCCEETTCTHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cCCEEeccChhhhhhCCHHHHHHHHHcCC
Confidence 579999999999999999999999 99999999999999999876 47899999999998888899999999999
Q ss_pred CCcccccccceeeeccCCCCccccccCCC--CCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhccccccccccccc
Q 009372 131 NDRLQWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT 208 (536)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 208 (536)
+...........+... .+....+.... ..|.. +..++. ...+...++.+....... +.....+..+
T Consensus 84 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~p~~---~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~s 151 (470)
T 3i6d_A 84 EHLLVNNATGQSYVLV--NRTLHPMPKGAVMGIPTK---IAPFVS-TGLFSLSGKARAAMDFIL------PASKTKDDQS 151 (470)
T ss_dssp CTTEEECCCCCEEEEC--SSCEEECCC-------------------------CCSHHHHHHHHS------CCCSSSSCCB
T ss_pred cceeecCCCCccEEEE--CCEEEECCCCcccCCcCc---hHHhhc-cCcCCHHHHHHHhcCccc------CCCCCCCCcC
Confidence 8765422111111111 11111111000 01111 011110 111111111111111110 1112345789
Q ss_pred HHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH-------hhh---------------cCCCeEEEe
Q 009372 209 VQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQE---------------KHGSKMAFL 266 (536)
Q Consensus 209 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------~~g~~~~~~ 266 (536)
+.+|+++. +...+.+.++.++....+..++++++.......+..+ ... ..+..+..+
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (470)
T 3i6d_A 152 LGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTL 230 (470)
T ss_dssp HHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEE
T ss_pred HHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEe
Confidence 99999986 6778888889999999998999998876543321100 000 001234445
Q ss_pred cCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHH
Q 009372 267 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFK 346 (536)
Q Consensus 267 ~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~ 346 (536)
.+| +..+++.|.+.+.+ ++|+++++|++|..++++ +.|++.+|+++.||+||+|+|++.+.+++++.. ...
T Consensus 231 ~~g-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~----~~~ 301 (470)
T 3i6d_A 231 STG-LQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPHKAAAGMLSELP----AIS 301 (470)
T ss_dssp TTC-THHHHHHHHHTCCS--EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCHHHHHHHTTTST----THH
T ss_pred CCh-HHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCHHHHHHHcCCch----hhH
Confidence 555 67888877776644 799999999999986555 358889998899999999999999999987642 246
Q ss_pred HHhccCCccEEEEEEEeeeccccCcccccccCcccccc-CC--cceeeeccccCcccccCCCccEEEEEEec--chhhcc
Q 009372 347 RLEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSR-SS--LLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWIS 421 (536)
Q Consensus 347 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~ 421 (536)
+++.+.+.++.++++. |++++|+......+ .+.+. .+ +..+.++ +..++...+.+..++..+++. ...+..
T Consensus 302 ~~~~~~~~~~~~v~l~--~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~-s~~~~~~~p~~~~~l~~~~~~~~~~~~~~ 377 (470)
T 3i6d_A 302 HLKNMHSTSVANVALG--FPEGSVQMEHEGTG-FVISRNSDFAITACTWT-NKKWPHAAPEGKTLLRAYVGKAGDESIVD 377 (470)
T ss_dssp HHHTCEEEEEEEEEEE--ESSTTCCCSSCSSE-EEECSTTCCSEEEEEEH-HHHCGGGSCTTCEEEEEEECCSSCCGGGT
T ss_pred HHhcCCCCceEEEEEE--ECchhcCCCCCCeE-EEccCCCCCCceEEEEE-cCcCCCcCCCCCEEEEEEECCCCCccccC
Confidence 7888888888888877 88888764322222 22222 22 1122222 222344455565666555543 245667
Q ss_pred CChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCC----CCCCCCCCCCCeEEecccccCCCC
Q 009372 422 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYL 497 (536)
Q Consensus 422 ~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~p~~~l~~aG~~~~~~~~ 497 (536)
++++++++.++++|.++||.... +..+...+|+++.+.+.++... .++.+.++.+||||||+++.+
T Consensus 378 ~~~~~~~~~~~~~l~~~~g~~~~-------p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g--- 447 (470)
T 3i6d_A 378 LSDNDIINIVLEDLKKVMNINGE-------PEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEG--- 447 (470)
T ss_dssp SCHHHHHHHHHHHHGGGSCCCSC-------CSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---
T ss_pred CCHHHHHHHHHHHHHHHhCCCCC-------ceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC---
Confidence 89999999999999999986321 2344556677776666666321 122334567899999999864
Q ss_pred CchhHHHHHHHHHHHHHHHHH
Q 009372 498 ASMEGAVLSGKLCAQAIVQDY 518 (536)
Q Consensus 498 ~~i~gA~~SG~~aA~~ll~~l 518 (536)
.++++|+.||+++|++|++.|
T Consensus 448 ~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 448 VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 479999999999999999876
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=6.9e-37 Score=313.20 Aligned_cols=424 Identities=16% Similarity=0.215 Sum_probs=277.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCc
Q 009372 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (536)
Q Consensus 54 ~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~ 133 (536)
....+||+|||||++||+||+.|++.|++|+|||+++++||++.+.. .+|+.+|.|++++...++.+.++++++|+...
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~ 91 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRALAAALNLEGR 91 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ETTEEEESSCCCEETTCHHHHHHHHHTTCGGG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cCCeeeecChhhhhhhhHHHHHHHHHcCCcce
Confidence 34567999999999999999999999999999999999999999976 47899999999998777889999999998754
Q ss_pred ccccc--c-ceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHH
Q 009372 134 LQWKE--H-SMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (536)
Q Consensus 134 ~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (536)
+.... . ...+.. ++.. +. +|.. ...++. .....+.++.+......... ....++.++.
T Consensus 92 ~~~~~~~~~~~~~~~---~g~~--~~----~p~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~s~~ 152 (478)
T 2ivd_A 92 IRAADPAAKRRYVYT---RGRL--RS----VPAS---PPAFLA-SDILPLGARLRVAGELFSRR------APEGVDESLA 152 (478)
T ss_dssp EECSCSSCCCEEEEE---TTEE--EE----CCCS---HHHHHT-CSSSCHHHHHHHHGGGGCCC------CCTTCCCBHH
T ss_pred eeecCccccceEEEE---CCEE--EE----CCCC---HHHhcc-CCCCCHHHHHHHhhhhhcCC------CCCCCCCCHH
Confidence 33221 0 111111 1111 11 1111 112222 12333444433332221110 0124568999
Q ss_pred HHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhh----------------------hcCC----CeEE
Q 009372 211 EWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ----------------------EKHG----SKMA 264 (536)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g----~~~~ 264 (536)
+|+++. +...+.+.++.++....++.+++++++...+..+..+.. ...+ ....
T Consensus 153 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (478)
T 2ivd_A 153 AFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALS 231 (478)
T ss_dssp HHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEE
T ss_pred HHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEE
Confidence 999986 778888888888888888889999987655433322110 0111 3455
Q ss_pred EecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEE---cCCcEEEcCEEEEccCHHHHhhcCCCcchh
Q 009372 265 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDILKLQLPENWKE 341 (536)
Q Consensus 265 ~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~---~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~ 341 (536)
++.|| +..+++.|.+.+ |++|+++++|++|..++++ +.|++ .+|++++||+||+|+|++.+.+|+++ .+
T Consensus 232 ~~~gG-~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~--~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~--l~ 303 (478)
T 2ivd_A 232 TFDGG-LQVLIDALAASL---GDAAHVGARVEGLAREDGG--WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP--LD 303 (478)
T ss_dssp EETTC-THHHHHHHHHHH---GGGEESSEEEEEEECC--C--CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTT--TC
T ss_pred EECCC-HHHHHHHHHHHh---hhhEEcCCEEEEEEecCCe--EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhc--cC
Confidence 66666 788888888877 5799999999999975554 34776 67778999999999999999988865 34
Q ss_pred cHHHHHHhccCCccEEEEEEEeeeccccCcccccccCcccc--ccCCcceeeeccccCcccccCCCccEEEEEEec--ch
Q 009372 342 MAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLF--SRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AE 417 (536)
Q Consensus 342 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~ 417 (536)
....++++++.+.++.++.+. |++++|+.. ..++.... .+.+...++++. ...+...+++..++.++... ..
T Consensus 304 ~~~~~~l~~~~~~~~~~v~l~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~p~g~~~l~~~~~~~~~~ 379 (478)
T 2ivd_A 304 DALAALVAGIAYAPIAVVHLG--FDAGTLPAP-DGFGFLVPAEEQRRMLGAIHAS-TTFPFRAEGGRVLYSCMVGGARQP 379 (478)
T ss_dssp HHHHHHHHTCCBCCEEEEEEE--ECTTSSCCC-CSSEEECCGGGCCSCCEEEEHH-HHCGGGBSTTCEEEEEEEECTTCG
T ss_pred HHHHHHHhcCCCCcEEEEEEE--EccccCCCC-CceEEEecCCCCCceEEEEEEc-ccCCCcCCCCCEEEEEEeCCcCCc
Confidence 556678888988888888877 777666531 12222221 112233333332 22333445565555544433 24
Q ss_pred hhccCChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCCC----CCCCCCCCCCeEEeccccc
Q 009372 418 EWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC----RPLQRSPVEGFYLAGDYTK 493 (536)
Q Consensus 418 ~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~p~~~l~~aG~~~~ 493 (536)
.|...+++++.+.++++|.+++|.... +..+....|+.+...+.++.... ++.+.. ++||||||+++.
T Consensus 380 ~~~~~~~~~~~~~~~~~l~~~~~~~~~-------p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~ 451 (478)
T 2ivd_A 380 GLVEQDEDALAALAREELKALAGVTAR-------PSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYK 451 (478)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTS
T ss_pred cccCCCHHHHHHHHHHHHHHHhCCCCC-------CcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCC
Confidence 566788999999999999999986321 12334567777765555542111 111122 689999999984
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009372 494 QKYLASMEGAVLSGKLCAQAIVQDYVLL 521 (536)
Q Consensus 494 ~~~~~~i~gA~~SG~~aA~~ll~~l~~~ 521 (536)
. ++++||+.||+++|++|+..++..
T Consensus 452 g---~gv~gA~~SG~~aA~~i~~~l~~~ 476 (478)
T 2ivd_A 452 G---VGLNDCIRNAAQLADALVAGNTSH 476 (478)
T ss_dssp C---CSHHHHHHHHHHHHHHHCC-----
T ss_pred C---CCHHHHHHHHHHHHHHHHHhhccC
Confidence 3 579999999999999998877543
No 7
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=1.6e-36 Score=312.34 Aligned_cols=431 Identities=20% Similarity=0.235 Sum_probs=215.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCc--c
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR--L 134 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~--~ 134 (536)
+++|||||||++||+||+.|+++|++|+|||+++++||+++++. .+|+.+|.|+|++... ..+.++++.+|.... +
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~-~~~~~l~~~~g~~~~~~~ 78 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDP-SAIEELFALAGKQLKEYV 78 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCT-HHHHHHHHTTTCCGGGTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCc-hhHHHHHHHhcchhhhce
Confidence 57999999999999999999999999999999999999999987 5899999999988642 246677888775432 2
Q ss_pred cccccceeeeccCCCCccccccCCCCC-----------CcchhHHHHHHhcCCCCChhHHHHhhccc-chh---------
Q 009372 135 QWKEHSMIFAMPNKPGEFSRFDFPEVL-----------PAPLNGILAILRNNEMLTWPEKVKFAIGL-LPA--------- 193 (536)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------- 193 (536)
.+.+.+..+.+...++... .+.... |.....+..++. ..+..... ...
T Consensus 79 ~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~l~~~~p~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 147 (501)
T 4dgk_A 79 ELLPVTPFYRLCWESGKVF--NYDNDQTRLEAQIQQFNPRDVEGYRQFLD---------YSRAVFKEGYLKLGTVPFLSF 147 (501)
T ss_dssp CEEEESSSEEEEETTSCEE--EECSCHHHHHHHHHHHCTHHHHHHHHHHH---------HHHHHTSSSCC--CCCCCCCH
T ss_pred eeEecCcceEEEcCCCCEE--EeeccHHHHHHHHhhcCccccchhhhHHH---------HHHHhhhhhhhhccccccchh
Confidence 3322222222222222211 111100 111111111110 00000000 000
Q ss_pred --hhcccccccc-cccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhcCCCeEEEecCCC
Q 009372 194 --IIGGQAYVEA-QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNP 270 (536)
Q Consensus 194 --~~~~~~~~~~-~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~ 270 (536)
.......+.. ....++.+++.+. +.++..+.++..... ..+..+...+....+. .......| ..++.||
T Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~-~~g~~p~~~~~~~~~~---~~~~~~~G--~~~p~GG- 219 (501)
T 4dgk_A 148 RDMLRAAPQLAKLQAWRSVYSKVASY-IEDEHLRQAFSFHSL-LVGGNPFATSSIYTLI---HALEREWG--VWFPRGG- 219 (501)
T ss_dssp HHHHHSGGGTTTSHHHHHHHHHHHTT-CCCHHHHHHHHHHHH-HHHSCC--CCCTHHHH---HHHHSCCC--EEEETTH-
T ss_pred hhhhhhhhhhhhhhhcccHHHHHHHH-hccHHHHhhhhhhhc-ccCCCcchhhhhhhhh---hhhhccCC--eEEeCCC-
Confidence 0000000000 0113555666655 444444444332221 1123333333222211 11222222 4467776
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH-HHhhcCCCcchhcHHHHHHh
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQLPENWKEMAYFKRLE 349 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~-~l~~ll~~~~~~~~~~~~l~ 349 (536)
++.|+++|++.++++|++|++|++|++|.. +++++++|++.+|+++.||.||++++++ ++..|+++...+....+.++
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~ 298 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQ 298 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC-----------------------
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhh
Confidence 899999999999999999999999999998 4677888999999999999999988765 55678877655555556666
Q ss_pred ccCCcc-EEEEEEEeeeccccCc--------------ccccccCccccccCCcceeeeccccCcccccCCCccEEEE-EE
Q 009372 350 KLVGVP-VINIHIWVFFNCRFDR--------------KLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLEL-VF 413 (536)
Q Consensus 350 ~~~~~~-~~~v~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~ 413 (536)
...+.+ ..++++. ++.+... .+...+....+++++...+ ..++..++...|+++..+.+ ..
T Consensus 299 ~~~~~~s~~~~~~~--l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~s~~dp~~ap~G~~~~~~~~~ 375 (501)
T 4dgk_A 299 TKRMSNSLFVLYFG--LNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYL-HAPCVTDSSLAPEGCGSYYVLAP 375 (501)
T ss_dssp ----CCEEEEEEEE--ESSCCTTSCSEEEEEECC-------------CCCEEEEEE-ECGGGTCGGGSSTTCEEEEEEEE
T ss_pred ccccCCceeEEEec--ccCCccccccceeccccchhhhccccccccccccCCceec-ccCCCCCCCcCCCCCceEEEEEe
Confidence 665553 4555555 3332211 0000001111112222211 23456778888888875543 33
Q ss_pred ecchhhccC----ChHHHHHHHHHHHHHhC-CCCcccccccceEEEEEEeecCCcc-----------cccCCC---CCCC
Q 009372 414 APAEEWISC----SDSEIIDATMKELAKLF-PDEISADQSKAKIVKYHVVKTPRSV-----------YKTIPN---CEPC 474 (536)
Q Consensus 414 ~~~~~~~~~----~~ee~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~-----------~~~~~~---~~~~ 474 (536)
.+...+... .++++.+.+++.|++.+ |+.. ..++ +....+|..+ |+..+. ....
T Consensus 376 ~p~~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~------~~i~-~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~ 448 (501)
T 4dgk_A 376 VPHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGLR------SQLV-THRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWF 448 (501)
T ss_dssp ECCTTTSCCCHHHHHHHHHHHHHHHHHHHTCTTHH------HHEE-EEEEECTTTTC-----------------------
T ss_pred cCccccccccHHHHHHHHHHHHHHHHHHhhCCChH------HceE-EEEECCHHHHHHHcCCCCccccChhcchhhcccc
Confidence 333222221 25778899999998865 6531 1233 3334455532 222221 2224
Q ss_pred CCCC-CCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009372 475 RPLQ-RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 521 (536)
Q Consensus 475 ~~~~-~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~ 521 (536)
+|.. .+|++|||+||++++++ ++++||+.||+.||++|+++|..-
T Consensus 449 RP~~~~t~i~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 449 RPHNRDKTITNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp -------CCTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCCCCCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCC
Confidence 5543 47899999999999987 799999999999999999988654
No 8
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=309.05 Aligned_cols=422 Identities=18% Similarity=0.187 Sum_probs=278.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecCCccCceeeeeccCCCCeeeeceeeeccC---cchHHHHHHHhCCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGA---YPNIQNLFGELGIN 131 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~---~~~~~~l~~~lg~~ 131 (536)
++||+|||||++||+||++|+++|. +|+|||+++++||++.+....+|+.+|.|++++... ++.+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 3699999999999999999999999 999999999999999986545689999999988653 55688999999998
Q ss_pred Ccccccccc-----eeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhccccccccccc
Q 009372 132 DRLQWKEHS-----MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDG 206 (536)
Q Consensus 132 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (536)
......... ..+.. ..+....+ +. ....+. .....+...........+.. . ....++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~--~~g~~~~~--p~----~~~~~~---~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ 143 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLY--VGGALHAL--PT----GLRGLL---RPSPPFSKPLFWAGLRELTK------P-RGKEPD 143 (477)
T ss_dssp GGEEEECTTSHHHHCEEEE--ETTEEEEC--CC----SSCC------CCTTSCSCSSHHHHTTTTS------C-CCCSSC
T ss_pred ceeeecCCCCchhcceEEE--ECCEEEEC--CC----Chhhcc---cccchhhhHHHHHHHHhhhc------C-CCCCCC
Confidence 654322100 00100 01111110 00 000000 00000000000111111110 0 112346
Q ss_pred ccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhh---------------------------cC
Q 009372 207 LTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE---------------------------KH 259 (536)
Q Consensus 207 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 259 (536)
.++.+|+++. +..++.+.++.++....++.++++++.......+...... ..
T Consensus 144 ~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
T 3nks_A 144 ETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAE 222 (477)
T ss_dssp CBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHT
T ss_pred cCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhccc
Confidence 8999999985 6678888889999999999999999887765443221100 01
Q ss_pred CCeEEEecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcc
Q 009372 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 339 (536)
Q Consensus 260 g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~ 339 (536)
+....++.|| +..+++.|.+.+.+.|++|+++++|++|..++++. +.|++ +|+++.||+||+|+|++.+.+|+++.
T Consensus 223 ~~~~~~~~gG-~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~-~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~- 298 (477)
T 3nks_A 223 RWSQWSLRGG-LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSL-RDSSLEADHVISAIPASVLSELLPAE- 298 (477)
T ss_dssp TCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGC-EEEEC-SSCEEEESEEEECSCHHHHHHHSCGG-
T ss_pred CccEEEECCC-HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCce-EEEEE-CCeEEEcCEEEECCCHHHHHHhcccc-
Confidence 1234455666 88999999999999999999999999999854442 34666 45589999999999999999998764
Q ss_pred hhcHHHHHHhccCCccEEEEEEEeeeccccCcccccccCccccc--cCCcceeeeccccCccccc-CCCccEEEEEEecc
Q 009372 340 KEMAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFS--RSSLLSVYADMSLTCKEYY-NPNQSMLELVFAPA 416 (536)
Q Consensus 340 ~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~ 416 (536)
+....+.+.++.+.++.++++. |+.++|+. ..++.++.. +..+.++.++.+ .++... +++..++..++++.
T Consensus 299 -~~~~~~~l~~~~~~~~~~v~l~--~~~~~~~~--~~~g~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~l~~~~gg~ 372 (477)
T 3nks_A 299 -AAPLARALSAITAVSVAVVNLQ--YQGAHLPV--QGFGHLVPSSEDPGVLGIVYDSV-AFPEQDGSPPGLRVTVMLGGS 372 (477)
T ss_dssp -GHHHHHHHHTCCEEEEEEEEEE--ETTCCCSS--CSSEEECCTTTCSSEEEEECHHH-HCGGGSTTTTCEEEEEEECHH
T ss_pred -CHHHHHHHhcCCCCcEEEEEEE--ECCCCCCC--CCceEEccCCCCCCceEEEEecc-ccCCCCCCCCceEEEEEECCc
Confidence 2345677888888888888876 77777642 133333322 223344444332 233332 34556665555432
Q ss_pred --hhhc----cCChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCCCCCC----CCCCCCCeE
Q 009372 417 --EEWI----SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPL----QRSPVEGFY 486 (536)
Q Consensus 417 --~~~~----~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~p~~~l~ 486 (536)
..+. .++++++++.++++|.++++.... +..+.+.+|+++++.+.+++...... +....++|+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-------~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~ 445 (477)
T 3nks_A 373 WLQTLEASGCVLSQELFQQRAQEAAATQLGLKEM-------PSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLT 445 (477)
T ss_dssp HHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEE
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHhCCCCC-------CcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 2222 358999999999999999985321 23566778888888887774322111 112235899
Q ss_pred EecccccCCCCCchhHHHHHHHHHHHHHHHH
Q 009372 487 LAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 517 (536)
Q Consensus 487 ~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~ 517 (536)
+||+++.. .+|++|+.||+++|++|+..
T Consensus 446 l~G~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 446 LAGASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp ECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred EEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 99999754 58999999999999999863
No 9
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=6.7e-35 Score=293.22 Aligned_cols=400 Identities=15% Similarity=0.183 Sum_probs=259.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeecc--CcchHHHHHHHhCCCCccc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG--AYPNIQNLFGELGINDRLQ 135 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~--~~~~~~~l~~~lg~~~~~~ 135 (536)
+||+|||||++||+||++|+++|++|+|||+++++||++.++. .+|+.+|.|++.+.. ....+.++++++|+...+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIV 79 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEE
Confidence 5999999999999999999999999999999999999999876 578999999866543 3457889999999875432
Q ss_pred ccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHHHHH
Q 009372 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (536)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (536)
.......+.. .+....+ .. .. ..+...++.+....+... ... ....+..++.+|+++
T Consensus 80 ~~~~~~~~~~---~g~~~~~--~~----~~----------~~l~~~~~~~~~~~~~~~-~~~---~~~~~~~s~~~~l~~ 136 (421)
T 3nrn_A 80 NSNPKGKILW---EGKIFHY--RE----SW----------KFLSVKEKAKALKLLAEI-RMN---KLPKEEIPADEWIKE 136 (421)
T ss_dssp ECSSSCEEEE---TTEEEEG--GG----GG----------GGCC--------CCHHHH-HTT---CCCCCCSBHHHHHHH
T ss_pred ECCCCeEEEE---CCEEEEc--CC----ch----------hhCCHhHHHHHHHHHHHH-Hhc---cCCCCCCCHHHHHHH
Confidence 2221111111 1111110 00 00 001111111111000000 000 011234789999999
Q ss_pred cCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhcCCCeEEEecCCCCccchHHHHHHHHHcCcEEEeCcce
Q 009372 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V 295 (536)
.++..+..+.++.++....++.++.++++......+..... .+. ..++.+| +..+++.|.+.++++|++|+++++|
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~gG-~~~l~~~l~~~~~~~G~~i~~~~~V 212 (421)
T 3nrn_A 137 KIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR--WGG-PGLIRGG-CKAVIDELERIIMENKGKILTRKEV 212 (421)
T ss_dssp HTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTC-HHHHHHHHHHHHHTTTCEEESSCCE
T ss_pred hcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh--cCC-cceecCC-HHHHHHHHHHHHHHCCCEEEcCCeE
Confidence 87777888888888888878889999998766665554322 122 2456666 7899999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEEeeeccccCccccc
Q 009372 296 QKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLKN 375 (536)
Q Consensus 296 ~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~ 375 (536)
++|..+ ++.+ | +.+|+++.||.||+|+|++.+.+|++....+..+.+.++++.+.+..++++. ++ ++..
T Consensus 213 ~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~--~~----~~~~- 281 (421)
T 3nrn_A 213 VEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLA--VP----GEPR- 281 (421)
T ss_dssp EEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEE--EE----SSCS-
T ss_pred EEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEE--Ec----CCcc-
Confidence 999874 4444 5 4577799999999999999999999754445566778888888888888877 43 3321
Q ss_pred ccCccccccC-CcceeeeccccCcccccCCCccEEEEEEecchhhccCChHHHHHHHHHHHHHhCCCCcccccccceEEE
Q 009372 376 TYDHLLFSRS-SLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVK 454 (536)
Q Consensus 376 ~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 454 (536)
....+.+..+ .+.. +..++..++...|++..++.+...- ...+.++..+.++++|++++|. . .+.
T Consensus 282 ~~~~~~~~~~~~~~~-i~~~s~~~p~~ap~G~~~~~~~~~~----~~~~~~~~~~~~~~~L~~~~p~-~-------~~~- 347 (421)
T 3nrn_A 282 IGNTIVFTPGLMING-FNEPSALDKSLAREGYTLIMAHMAL----KNGNVKKAIEKGWEELLEIFPE-G-------EPL- 347 (421)
T ss_dssp SCSSEEECTTSSSCE-EECGGGTCGGGSCTTEEEEEEEEEC----TTCCHHHHHHHHHHHHHHHCTT-C-------EEE-
T ss_pred cCCeEEEcCCcceee-EeccCCCCCCcCCCCceEEEEEEee----ccccHHHHHHHHHHHHHHHcCC-C-------eEE-
Confidence 1122233222 2222 2345667788888887766543221 1223345699999999999992 1 122
Q ss_pred EEEeecCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHH
Q 009372 455 YHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 514 (536)
Q Consensus 455 ~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~l 514 (536)
.+..|+.+++.+........+ .++ +|||+|||++.+.+..+++||+.||++||++|
T Consensus 348 -~~~~~~~~~p~~~~~~~~~~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 348 -LAQVYRDGNPVNRTRAGLHIE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp -EEEEC-------------CCC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred -EeeeccCCCCcccccCCCCCC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 223355555554322111122 577 99999999999852224599999999999998
No 10
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=7.3e-37 Score=315.03 Aligned_cols=433 Identities=17% Similarity=0.178 Sum_probs=272.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCcc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (536)
...+||+|||||++||+||+.|++.|++|+|+|+++++||++.+.. ..|+.+|.|++++...++.+.++++++|+....
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~ 89 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFLIDSLGLREKQ 89 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcHHHHHHHHHcCCcccc
Confidence 3468999999999999999999999999999999999999998876 478899999999987778899999999987654
Q ss_pred cccccc-eeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHHH
Q 009372 135 QWKEHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (536)
Q Consensus 135 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 213 (536)
.+.... ..+.. .++... . +|... ..+.. ...+.+..+++.....+.... ........+..++.+|+
T Consensus 90 ~~~~~~~~~~~~--~~g~~~--~----~p~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~l 156 (504)
T 1sez_A 90 QFPLSQNKRYIA--RNGTPV--L----LPSNP---IDLIK-SNFLSTGSKLQMLLEPILWKN-KKLSQVSDSHESVSGFF 156 (504)
T ss_dssp ECCSSCCCEEEE--SSSSEE--E----CCSSH---HHHHH-SSSSCHHHHHHHHTHHHHC-----------CCCBHHHHH
T ss_pred eeccCCCceEEE--ECCeEE--E----CCCCH---HHHhc-cccCCHHHHHHHhHhhhccCc-ccccccCCCCccHHHHH
Confidence 332211 01111 111111 0 12111 11221 123334333332221110000 00000113458999999
Q ss_pred HHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH-----------h----hhc---------------CCCeE
Q 009372 214 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-----------L----QEK---------------HGSKM 263 (536)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~----~~~---------------~g~~~ 263 (536)
++. +..++.+.++.++....++.+++++++...+..+..+ + ... .....
T Consensus 157 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (504)
T 1sez_A 157 QRH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGS 235 (504)
T ss_dssp HHH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSC
T ss_pred HHH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCce
Confidence 887 7778888888888888888899999876543222111 0 000 01123
Q ss_pred EEecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCC----EEEEEEc--CC---cEEEcCEEEEccCHHHHhhc
Q 009372 264 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT----VKNFLLT--NG---NVIDGDAYVFATPVDILKLQ 334 (536)
Q Consensus 264 ~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~----~~~v~~~--~g---~~i~ad~VI~a~~~~~l~~l 334 (536)
.++.|| ++.|++.|++.+.+ ++|++|++|++|..++++. .+.|++. +| +++.||+||+|+|+..+.++
T Consensus 236 ~~~~GG-~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~l 312 (504)
T 1sez_A 236 FSFLGG-MQTLTDAICKDLRE--DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSM 312 (504)
T ss_dssp BEETTC-THHHHHHHHTTSCT--TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTS
T ss_pred EeeCcH-HHHHHHHHHhhccc--ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHH
Confidence 345555 67777777765421 6899999999999865552 1345554 45 57899999999999999998
Q ss_pred CCC---cchhcHHHHHHhccCCccEEEEEEEeeeccccCcccccccCccccccC-----CcceeeeccccCcccccCCCc
Q 009372 335 LPE---NWKEMAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSRS-----SLLSVYADMSLTCKEYYNPNQ 406 (536)
Q Consensus 335 l~~---~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~~~~~~~ 406 (536)
+++ ...+. ..+.++.+.++.++++. |+.++|+.....++.++...+ .+.+..+ .+..++...+++.
T Consensus 313 l~~~~~~~~~~---~~l~~~~~~~~~~v~l~--~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~-~s~~~~~~~p~g~ 386 (504)
T 1sez_A 313 KIAKRGNPFLL---NFIPEVDYVPLSVVITT--FKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLF-SSMMFPDRAPNNV 386 (504)
T ss_dssp EEESSSSBCCC---TTSCCCCEEEEEEEEEE--EEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEE-HHHHCGGGSCTTE
T ss_pred hhcccCCcccH---HHHhcCCCCceEEEEEE--EchhhcCCCCCceEEEcCCCCCCCCCccceEEe-eccccCCcCCCCC
Confidence 731 11121 12566777778888766 887777643222222221111 2223222 2234444555565
Q ss_pred cEEEEEEec--chhhccCChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCCCC---CCCCCC
Q 009372 407 SMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR---PLQRSP 481 (536)
Q Consensus 407 ~~~~~~~~~--~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~~~p 481 (536)
.++..+..+ ...|..++++++++.++++|++++|....+ .......|+.+++.+.+++.... ....+|
T Consensus 387 ~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p-------~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~ 459 (504)
T 1sez_A 387 YLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEP-------TYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKN 459 (504)
T ss_dssp EEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCC-------SSEEEEEEEEEEECCCTTHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCC-------eEEEEeECCCCCCccCcCHHHHHHHHHHHHHh
Confidence 555444433 256778899999999999999999863211 12233455555555555532111 123456
Q ss_pred CCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009372 482 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 521 (536)
Q Consensus 482 ~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~ 521 (536)
++||||||++++. .+++||+.||++||++|++.++..
T Consensus 460 ~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 460 LPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp STTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence 8899999999873 689999999999999999987654
No 11
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=2.4e-36 Score=308.87 Aligned_cols=427 Identities=18% Similarity=0.233 Sum_probs=277.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g--~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (536)
++||+|||||++||+||++|++.| ++|+|||+++++||++.+.. ..|+.+|.|++.+...++.+.++++++|++...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYR-EDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEEC-STTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEe-eCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 579999999999999999999999 99999999999999998875 478999999999988888999999999998764
Q ss_pred cccccceeeeccCCCCccccccCC--CCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHH
Q 009372 135 QWKEHSMIFAMPNKPGEFSRFDFP--EVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (536)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (536)
........+... .+....+... ..+|.. +..++. ...+....+. ........ .........++.++.+|
T Consensus 83 ~~~~~~~~~~~~--~g~~~~~p~~~~~~~p~~---~~~~~~-~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 83 VRNNTSQAFILD--TGGLHPIPKGAVMGIPTD---LDLFRQ-TTLLTEEEKQ-EVADLLLH--PSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp EECCCCCEEEEE--TTEEEECCSSEETTEESC---HHHHTT-CSSSCHHHHH-HHHHHHHS--CCTTCCCCSSCCBHHHH
T ss_pred eecCCCceEEEE--CCEEEECCCcccccCcCc---hHHHhh-ccCCChhHHH-HhhCcccC--CcccccCCCCCcCHHHH
Confidence 432111111111 1111111100 001111 112221 2333333332 11111110 00001113456899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH-------hh----hc--------------CCCeEEEec
Q 009372 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQ----EK--------------HGSKMAFLD 267 (536)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~--------------~g~~~~~~~ 267 (536)
+++. +..++.+.++.++....++.++++++.......+..+ .. .. .+..+.++.
T Consensus 154 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (475)
T 3lov_A 154 LRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLE 232 (475)
T ss_dssp HHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEET
T ss_pred HHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeC
Confidence 9985 6778888899999999998998888764322222110 00 00 133455566
Q ss_pred CCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHH
Q 009372 268 GNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 347 (536)
Q Consensus 268 gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~ 347 (536)
+| +..+++.|.+.+.+ ++|+++++|++|..++++ +.|++.+| ++.||+||+|+|++.+.+|+++.. . ..
T Consensus 233 ~G-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~--~---~~ 301 (475)
T 3lov_A 233 TG-LESLIERLEEVLER--SEIRLETPLLAISREDGR--YRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAH--L---PE 301 (475)
T ss_dssp TC-HHHHHHHHHHHCSS--CEEESSCCCCEEEEETTE--EEEECTTC-CEEESEEEECSCHHHHHHHCTTSC--C---HH
T ss_pred Ch-HHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCE--EEEEECCC-eEECCEEEECCCHHHHHHHcCccC--H---HH
Confidence 66 67888888877654 799999999999985544 34888888 799999999999999999987652 2 67
Q ss_pred HhccCCccEEEEEEEeeeccccCcccccccCcccccc-CCc--ceeeeccccCcccccCCCccEEEEEEec--chhhccC
Q 009372 348 LEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSR-SSL--LSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISC 422 (536)
Q Consensus 348 l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 422 (536)
++.+.+.++.++++. |+++++.+. ...+ .+.+. .+. .++.++ +..++...+. ..++..+++. ...+..+
T Consensus 302 ~~~~~~~~~~~v~l~--~~~~~~~~~-~g~g-~l~~~~~~~~~~~~~~~-s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~ 375 (475)
T 3lov_A 302 LEQLTTHSTATVTMI--FDQQQSLPI-EGTG-FVVNRRAPYSITACTAI-DQKWNHSAPD-HTVLRAFVGRPGNDHLVHE 375 (475)
T ss_dssp HHTCCEEEEEEEEEE--EECCSSCSS-SSSE-EEECTTSSCSEEEEEEH-HHHCTTTCTT-EEEEEEEECBTTBCGGGGS
T ss_pred HhcCCCCeEEEEEEE--ECCcCCCCC-CCEE-EEecCCCCCceEEEEEE-cccCCCCCCC-cEEEEEEeCCCCCCcccCC
Confidence 788888888888877 777763222 1122 22222 221 222222 2223333333 4445444432 2456678
Q ss_pred ChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCC----CCCCCCCCCCCeEEecccccCCCCC
Q 009372 423 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLA 498 (536)
Q Consensus 423 ~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~p~~~l~~aG~~~~~~~~~ 498 (536)
+++++++.++++|.++||.... +..+...+|+++.+.+.+++.. .++.+.++++||||||+++.. .
T Consensus 376 ~~e~~~~~~~~~L~~~~g~~~~-------p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~ 445 (475)
T 3lov_A 376 SDEVLQQAVLQDLEKICGRTLE-------PKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG---V 445 (475)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCC-------CSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---S
T ss_pred CHHHHHHHHHHHHHHHhCCCCC-------CeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC---C
Confidence 9999999999999999986321 2334556677776666666321 122234567899999999875 4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 009372 499 SMEGAVLSGKLCAQAIVQDYVLL 521 (536)
Q Consensus 499 ~i~gA~~SG~~aA~~ll~~l~~~ 521 (536)
++++|+.||+++|++|+..++..
T Consensus 446 g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 446 GLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp SHHHHHHHHHHHHHHHHHTC---
T ss_pred CHHHHHHHHHHHHHHHHHHhhcc
Confidence 79999999999999999977654
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=1e-35 Score=307.47 Aligned_cols=424 Identities=14% Similarity=0.182 Sum_probs=266.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~-g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~ 133 (536)
+.++||||||||++||+||++|+++ |++|+|||+++++||++++....+|+.+|.|+|++...++.+.+++++++....
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~~ 87 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKED 87 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCccc
Confidence 3468999999999999999999985 999999999999999999865568999999999999888999999999876543
Q ss_pred c-cccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHH
Q 009372 134 L-QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (536)
Q Consensus 134 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (536)
. ........+.. .+.+..+.+...+ ..+......+....+..... .......+..++.+|
T Consensus 88 ~~~~~~~~~~i~~---~g~~~~~p~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~ 148 (513)
T 4gde_A 88 DWYTHQRISYVRC---QGQWVPYPFQNNI--------------SMLPKEEQVKCIDGMIDAAL--EARVANTKPKTFDEW 148 (513)
T ss_dssp GEEEEECCEEEEE---TTEEEESSGGGGG--------------GGSCHHHHHHHHHHHHHHHH--HHHTCCSCCCSHHHH
T ss_pred eeEEecCceEEEE---CCeEeecchhhhh--------------hhcchhhHHHHHHHHHHHHH--hhhcccccccCHHHH
Confidence 2 11111111111 1222111110000 00111111111111111000 001122345789999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHH---------HHHHHh-hh-----cCCCeEEEecCCCCccchHH
Q 009372 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILI---------ALNRFL-QE-----KHGSKMAFLDGNPPERLCLP 277 (536)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~-----~~g~~~~~~~gg~~~~l~~~ 277 (536)
+.+. +...+.+.++.++....++.++++++...... .....+ .. .......++..++++.+++.
T Consensus 149 ~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~ 227 (513)
T 4gde_A 149 IVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIA 227 (513)
T ss_dssp HHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHH
T ss_pred HHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHH
Confidence 8876 56677788888888888888888776543211 111111 11 11122334433338899999
Q ss_pred HHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEE
Q 009372 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 357 (536)
Q Consensus 278 l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~ 357 (536)
|++.+.+.|++|++|++|++|..+ ++ . +++.+|+++.||+||+|+|...+.+++++.. ...+...+.|.++.
T Consensus 228 l~~~l~~~g~~i~~~~~V~~I~~~-~~-~--v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~~----~~~~~~~l~y~~~~ 299 (513)
T 4gde_A 228 VANTLPKEKTRFGEKGKVTKVNAN-NK-T--VTLQDGTTIGYKKLVSTMAVDFLAEAMNDQE----LVGLTKQLFYSSTH 299 (513)
T ss_dssp HHHTSCGGGEEESGGGCEEEEETT-TT-E--EEETTSCEEEEEEEEECSCHHHHHHHTTCHH----HHHHHTTCCEEEEE
T ss_pred HHHHHHhcCeeeecceEEEEEEcc-CC-E--EEEcCCCEEECCEEEECCCHHHHHHhcCchh----hHhhhhcccCCceE
Confidence 999999999999999999999863 33 2 6688999999999999999999999987542 23566778888887
Q ss_pred EEEEEeeeccccCcccccccCccccccCC-cceeeecccc---------------------CcccccCCCccEEEEEEe-
Q 009372 358 NIHIWVFFNCRFDRKLKNTYDHLLFSRSS-LLSVYADMSL---------------------TCKEYYNPNQSMLELVFA- 414 (536)
Q Consensus 358 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~---------------------~~~~~~~~~~~~~~~~~~- 414 (536)
.+.+. ++......... ...+.+.+.. ........++ ..+...+.+...+...+.
T Consensus 300 ~v~l~--~~~~~~~~~~~-~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (513)
T 4gde_A 300 VIGVG--VRGSRPERIGD-KCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLE 376 (513)
T ss_dssp EEEEE--EESSCCTTTTT-CCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEE
T ss_pred EEEEE--Eeccccccccc-cceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEec
Confidence 77776 33222111110 0001111100 0000001111 111122222222222221
Q ss_pred -cchhhccCChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCC----CCCCCCCCCCCeEEec
Q 009372 415 -PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAG 489 (536)
Q Consensus 415 -~~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~p~~~l~~aG 489 (536)
.......+++|++++.++++|.++.+....+ .++...+.+||++.+.+..++.. .++.+.. +|||++|
T Consensus 377 ~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~-----~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~--~~l~~~G 449 (513)
T 4gde_A 377 VSESSMKPVNQETILADCIQGLVNTEMLKPTD-----EIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD--KDIWSRG 449 (513)
T ss_dssp EEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTC-----EEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH--TTEEECS
T ss_pred ccchhccCCCHHHHHHHHHHHHHHhcCCCCcc-----ceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh--cCcEEec
Confidence 1244457899999999999999998754322 46777888999998888776422 2222222 5899999
Q ss_pred ccccCCCC-CchhHHHHHHHHHHHHHHH
Q 009372 490 DYTKQKYL-ASMEGAVLSGKLCAQAIVQ 516 (536)
Q Consensus 490 ~~~~~~~~-~~i~gA~~SG~~aA~~ll~ 516 (536)
....+.|. +.+++|+.||+.||+.|++
T Consensus 450 R~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 450 RFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp TTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 88887765 5799999999999999987
No 13
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=3.2e-33 Score=282.14 Aligned_cols=412 Identities=16% Similarity=0.179 Sum_probs=248.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccC--CCCeeeeceeeeccC-cchHHHHHHHhCCCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG--DGDWYETGLHIFFGA-YPNIQNLFGELGINDR 133 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~--~g~~~d~G~~~~~~~-~~~~~~l~~~lg~~~~ 133 (536)
++||+|||||++||+||+.|++.|++|+|||+++++||++.+.... .|..++.|++++... .+.+.++++++|++..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 80 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTA 80 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeee
Confidence 3699999999999999999999999999999999999999875422 388999999999877 7788899999998754
Q ss_pred ccccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHHH
Q 009372 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (536)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 213 (536)
.........+.. ..+.+... + .........+...+ .........+........+.....+ .++.+++
T Consensus 81 ~~~~~~~~~~~~--~~~~~~~~-~-~~~~~~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~l 147 (431)
T 3k7m_X 81 AASEFTSFRHRL--GPTAVDQA-F-PIPGSEAVAVEAAT--------YTLLRDAHRIDLEKGLENQDLEDLD-IPLNEYV 147 (431)
T ss_dssp ECCCCCEECCBS--CTTCCSSS-S-CCCGGGHHHHHHHH--------HHHHHHHTTCCTTTCTTSSSCGGGC-SBHHHHH
T ss_pred ecCCCCcEEEEe--cCCeecCC-C-CCCHHHHHHHHHHH--------HHHHHHHHhcCCCCCccCcchhhhc-CCHHHHH
Confidence 322111111100 01111000 0 00011111111100 0000111111110000111122334 8899999
Q ss_pred HHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHh---hh-cCCCeEEEecCCCCccchHHHHHHHH-HcCcE
Q 009372 214 RKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QE-KHGSKMAFLDGNPPERLCLPIVEHIQ-SLGGE 288 (536)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~g~~~~~~~gg~~~~l~~~l~~~l~-~~G~~ 288 (536)
+..+..... ..++..+....++.+.++++.......+...- .. ...... ...++ ... +.+.+. +.| +
T Consensus 148 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~~----l~~~~~~~~g-~ 219 (431)
T 3k7m_X 148 DKLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNG-SAD----LVDAMSQEIP-E 219 (431)
T ss_dssp HHHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTC-THH----HHHHHHTTCS-C
T ss_pred HhcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCc-HHH----HHHHHHhhCC-c
Confidence 988766543 44555566666677888888876654433210 00 011112 33333 333 344433 346 9
Q ss_pred EEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEEeeeccc
Q 009372 289 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWVFFNCR 368 (536)
Q Consensus 289 i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~ 368 (536)
|++|++|++|..++++ + .|++.+|++++||+||+|+|+..++.+...+..+....+++....+....++.+. |+++
T Consensus 220 i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~--~~~~ 295 (431)
T 3k7m_X 220 IRLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIH--VRGA 295 (431)
T ss_dssp EESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEE--EESC
T ss_pred eEeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEE--ECCC
Confidence 9999999999975444 3 4888888789999999999999988875444445556677888888788888776 6665
Q ss_pred cCcccccccCccccccCCcceeeeccccCcccccCCCccEEEEEEecchhhccCChHHHHHHHHHHHHHhCCCCcccccc
Q 009372 369 FDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQS 448 (536)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~ 448 (536)
|+. + +. ..++....+++... ...+..++..+..+.. +... ++ +.+.+.|++++|+.. +
T Consensus 296 ~~~-i---~~----~~d~~~~~~~~~~~-----~~~~~~~l~~~~~g~~-~~~~-~~---~~~~~~l~~~~~~~~-~--- 353 (431)
T 3k7m_X 296 EAG-I---EC----VGDGIFPTLYDYCE-----VSESERLLVAFTDSGS-FDPT-DI---GAVKDAVLYYLPEVE-V--- 353 (431)
T ss_dssp CTT-E---EE----EBSSSSSEEEEEEE-----CSSSEEEEEEEEETTT-CCTT-CH---HHHHHHHHHHCTTCE-E---
T ss_pred CcC-c---eE----cCCCCEEEEEeCcC-----CCCCCeEEEEEecccc-CCCC-CH---HHHHHHHHHhcCCCC-c---
Confidence 532 1 11 22222222222111 0122333333322222 3322 22 346678888988531 1
Q ss_pred cceEEEEEEeecCC--ccccc-CCC-CCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHH
Q 009372 449 KAKIVKYHVVKTPR--SVYKT-IPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 516 (536)
Q Consensus 449 ~~~~~~~~~~~~p~--~~~~~-~~~-~~~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~ 516 (536)
..+..++|...|+ |.|++ .++ .....+.+..|.+||||||++++..|+|||+||++||+|||++|+.
T Consensus 354 -~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 354 -LGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILH 424 (431)
T ss_dssp -EEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred -cEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHh
Confidence 1233345655565 44443 344 3456778889999999999999998999999999999999999986
No 14
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=4.6e-35 Score=300.29 Aligned_cols=430 Identities=16% Similarity=0.146 Sum_probs=250.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccC----------------CCCeeeeceeeeccC
Q 009372 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG----------------DGDWYETGLHIFFGA 117 (536)
Q Consensus 54 ~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~----------------~g~~~d~G~~~~~~~ 117 (536)
.+..+||+|||||++||+||+.|++.|++|+|||+++++||++.+.... .+..++.|++++...
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 87 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQS 87 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETT
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccH
Confidence 3457899999999999999999999999999999999999998776532 578899999988766
Q ss_pred cchHHHHHHHhCCCCccccccc-ceeee-ccCCCCccccccCCCCCCcchhH-HHHHHhcCCCCChhHHHHhhcccchhh
Q 009372 118 YPNIQNLFGELGINDRLQWKEH-SMIFA-MPNKPGEFSRFDFPEVLPAPLNG-ILAILRNNEMLTWPEKVKFAIGLLPAI 194 (536)
Q Consensus 118 ~~~~~~l~~~lg~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (536)
+ .+.++++++|+......... ...+. .... . +. ........ ...+... ..+.++..... ..
T Consensus 88 ~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~-----~~-g~~~~~~~~~~~~~~~-----~~~l~~~~~~~-~~- 151 (489)
T 2jae_A 88 H-ITLDYCRELGVEIQGFGNQNANTFVNYQSDT--S-----LS-GQSVTYRAAKADTFGY-----MSELLKKATDQ-GA- 151 (489)
T ss_dssp S-THHHHHHHHTCCEEEECCCCTTSEEECCCSS--T-----TT-TCCEEHHHHHHHHHHH-----HHHHHHHHHHH-TT-
T ss_pred H-HHHHHHHHcCCceEEccccCCCceEEecCCc--c-----cC-CccccHHHHhhhhhcc-----HHHHHHHHHhc-cc-
Confidence 6 88999999998743211111 11111 1100 0 00 01100100 0000000 00000000000 00
Q ss_pred hcccccccccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCC------------CccccHHHHHHHHHHHhh----hc
Q 009372 195 IGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFIN------------PDELSMQCILIALNRFLQ----EK 258 (536)
Q Consensus 195 ~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~----~~ 258 (536)
........+..++.+|+++.+-... ...+.......+..+ +.++....... +..++. ..
T Consensus 152 --~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 226 (489)
T 2jae_A 152 --LDQVLSREDKDALSEFLSDFGDLSD--DGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSG-IGRNFSFDFGYD 226 (489)
T ss_dssp --TTTTSCHHHHHHHHHHHHHHTTCCT--TSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHT-TTTTGGGGGCTT
T ss_pred --cccccchhhHHHHHHHHHHhhhhhh--ccccccccchhhccCCCcccccCCCCCCcCHHHHhhhh-HHHHHhhhhccc
Confidence 0000011233577788776321100 000000000000000 11111111100 011111 11
Q ss_pred CCCeEEEecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCC---cEEEcCEEEEccCHHHHhhcC
Q 009372 259 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQL 335 (536)
Q Consensus 259 ~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g---~~i~ad~VI~a~~~~~l~~ll 335 (536)
....+.++.|| ++.|++.|++.+.+ ++|++|++|++|..++++ + .|++.+| ++++||+||+|+|+.++.+|+
T Consensus 227 ~~~~~~~~~gG-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~ 301 (489)
T 2jae_A 227 QAMMMFTPVGG-MDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEG-V-TVEYTAGGSKKSITADYAICTIPPHLVGRLQ 301 (489)
T ss_dssp TSSSEEEETTC-TTHHHHHHHHHHCG--GGEETTCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECSCHHHHTTSE
T ss_pred cCccEEeecCC-HHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCe-E-EEEEecCCeEEEEECCEEEECCCHHHHHhCc
Confidence 23345566666 78999999988753 689999999999985444 3 4777776 579999999999999988886
Q ss_pred CCcchhcHHHHHHhccCCccEEEEEEEeeeccccCcccccccCccccccCCcceeeeccccCcccccCCCccEEEEEEec
Q 009372 336 PENWKEMAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP 415 (536)
Q Consensus 336 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 415 (536)
+ ..|....++++++++.+..++++. |+++||+.....++.....+.++..++++ +... ..+...++..+..+
T Consensus 302 ~--~l~~~~~~~l~~~~~~~~~kv~l~--~~~~~w~~~~~~~g~~~~~~~~~~~~~~~-s~~~---~~~~~~l~~~~~~g 373 (489)
T 2jae_A 302 N--NLPGDVLTALKAAKPSSSGKLGIE--YSRRWWETEDRIYGGASNTDKDISQIMFP-YDHY---NSDRGVVVAYYSSG 373 (489)
T ss_dssp E--CCCHHHHHHHHTEECCCEEEEEEE--ESSCHHHHTTCCCSCEEEESSTTCEEECC-SSST---TSSCEEEEEEEEET
T ss_pred c--CCCHHHHHHHHhCCCccceEEEEE--eCCCCccCCCCcccccccCCCCceEEEeC-CCCC---CCCCCEEEEEeeCC
Confidence 5 235566788899999999888876 88888765422333333445555444432 2211 11233444333332
Q ss_pred --chhhccCChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCccccc---C------CC-CCCCCCCCCCCCC
Q 009372 416 --AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKT---I------PN-CEPCRPLQRSPVE 483 (536)
Q Consensus 416 --~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~------~~-~~~~~~~~~~p~~ 483 (536)
...|..++++++++.++++|++++|......+ ..+...+|...|+...++ . ++ .....+.+.+|.+
T Consensus 374 ~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~--~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 451 (489)
T 2jae_A 374 KRQEAFESLTHRQRLAKAIAEGSEIHGEKYTRDI--SSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVD 451 (489)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHHCGGGGSSE--EEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBT
T ss_pred chhhhhhcCCHHHHHHHHHHHHHHHcCcchhhhc--cccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCC
Confidence 36688889999999999999999985111111 112223344444432221 1 33 2122334567889
Q ss_pred CeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 009372 484 GFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 520 (536)
Q Consensus 484 ~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~ 520 (536)
||||||++++. +.++++||+.||++||++|+..++.
T Consensus 452 ~l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 452 KIYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp TEEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999975 4589999999999999999987764
No 15
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=1.3e-33 Score=290.23 Aligned_cols=431 Identities=16% Similarity=0.142 Sum_probs=257.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeecc-CCCCeeeeceeeeccCcchHHHHHHHhCCCCc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD-GDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~ 133 (536)
...+||+|||||++||+||+.|++.|++|+|||+++++||++.+... ..++.+|.|++++......+.++++++|+...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 35679999999999999999999999999999999999999987643 35788999999998777788999999998642
Q ss_pred cccc-ccceeeeccCCCCcc-------ccccCCCCCCcc-hhHHHHHHhcCCCCChhHHHHhhcccchhhh--ccccccc
Q 009372 134 LQWK-EHSMIFAMPNKPGEF-------SRFDFPEVLPAP-LNGILAILRNNEMLTWPEKVKFAIGLLPAII--GGQAYVE 202 (536)
Q Consensus 134 ~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 202 (536)
.... .....+...+..... ..+.+. ..+.. ......++.. . ...+..... .......
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~ 178 (498)
T 2iid_A 111 EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYP-VKPSEAGKSAGQLYEE--------S---LGKVVEELKRTNCSYILN 178 (498)
T ss_dssp EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCC-CCGGGTTCCHHHHHHH--------H---THHHHHHHHHSCHHHHHH
T ss_pred eecccCCccEEEeCCeeecccccccCccccccC-CCccccCCCHHHHHHH--------H---HHHHHHHHhhccHHHHHH
Confidence 1110 001111111000000 000000 00000 0000000000 0 000000000 0001112
Q ss_pred ccccccHHHHHHHcC-CChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhcCCCeEEEecCCCCccchHHHHHH
Q 009372 203 AQDGLTVQEWMRKQG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (536)
Q Consensus 203 ~~~~~s~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~ 281 (536)
..+..++.+|++..+ +...... .+..+....... ..+.......... + ..+..+..+.|| ++.+++.|.+.
T Consensus 179 ~~~~~s~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~-~--~~~~~~~~~~gG-~~~l~~~l~~~ 250 (498)
T 2iid_A 179 KYDTYSTKEYLIKEGDLSPGAVD-MIGDLLNEDSGY---YVSFIESLKHDDI-F--AYEKRFDEIVDG-MDKLPTAMYRD 250 (498)
T ss_dssp HHTTSBHHHHHHHTSCCCHHHHH-HHHHHTTCGGGT---TSBHHHHHHHHHH-H--TTCCCEEEETTC-TTHHHHHHHHH
T ss_pred HhhhhhHHHHHHHccCCCHHHHH-HHHHhcCcccch---hHHHHHHHHHHhc-c--ccCcceEEeCCc-HHHHHHHHHHh
Confidence 235678999999865 3443322 222221111000 1111111111111 1 123345566666 78999999888
Q ss_pred HHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc----EEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEE
Q 009372 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 357 (536)
Q Consensus 282 l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~----~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~ 357 (536)
+.+ +|++|++|++|..++++ + .|++.+|+ +++||+||+|+|+..+.++...+.+|....++++++.+.+..
T Consensus 251 l~~---~i~~~~~V~~I~~~~~~-v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~ 325 (498)
T 2iid_A 251 IQD---KVHFNAQVIKIQQNDQK-V-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGT 325 (498)
T ss_dssp TGG---GEESSCEEEEEEECSSC-E-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEE
T ss_pred ccc---ccccCCEEEEEEECCCe-E-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCccee
Confidence 754 79999999999985444 3 57777764 589999999999999888764444566777889999999988
Q ss_pred EEEEEeeeccccCcccccccCccccccCCcceeeeccccCcccccCCCccEEEEEEe-c-chhhccCChHHHHHHHHHHH
Q 009372 358 NIHIWVFFNCRFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFA-P-AEEWISCSDSEIIDATMKEL 435 (536)
Q Consensus 358 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ee~~~~~~~~L 435 (536)
|+.+. |+++||+.. ...++..+.+.+...+++. +. ..+.+..++..+.. + +..|..++++++.+.++++|
T Consensus 326 kv~l~--~~~~~w~~~-~~~~~~~~~~~~~~~~~~~-s~----~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L 397 (498)
T 2iid_A 326 KIFLT--CTTKFWEDD-GIHGGKSTTDLPSRFIYYP-NH----NFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDL 397 (498)
T ss_dssp EEEEE--ESSCGGGGG-TCCSSEEEESSTTCEEECC-SS----CCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHH
T ss_pred EEEEE--eCCCCccCC-CccCCcccCCCCcceEEEC-CC----CCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHH
Confidence 88776 888888753 1122333333344333322 11 12334444444332 2 35677889999999999999
Q ss_pred HHhCCCCcccc-cccceEEEEEEeecCCcc--ccc-CCC-CCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHH
Q 009372 436 AKLFPDEISAD-QSKAKIVKYHVVKTPRSV--YKT-IPN-CEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLC 510 (536)
Q Consensus 436 ~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~--~~~-~~~-~~~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~a 510 (536)
.++++...... .....+...+|...|++. +.+ .++ .....+.+.+|.+||||||++++.. +|+++||++||++|
T Consensus 398 ~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~-~g~~~GAi~SG~ra 476 (498)
T 2iid_A 398 SLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQA-HGWIDSTIKSGLRA 476 (498)
T ss_dssp HHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSS-SSCHHHHHHHHHHH
T ss_pred HHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccC-CcCHHHHHHHHHHH
Confidence 99998421110 001123444555555543 222 222 1112334567889999999999875 48999999999999
Q ss_pred HHHHHHHHH
Q 009372 511 AQAIVQDYV 519 (536)
Q Consensus 511 A~~ll~~l~ 519 (536)
|++|++.+.
T Consensus 477 A~~i~~~l~ 485 (498)
T 2iid_A 477 ARDVNLASE 485 (498)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999875
No 16
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=3.2e-34 Score=292.33 Aligned_cols=425 Identities=19% Similarity=0.230 Sum_probs=248.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCCccCceeeeeccCCCCeeeeceeeecc----CcchHHHHHHH-hC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG----AYPNIQNLFGE-LG 129 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~----~~~~~~~l~~~-lg 129 (536)
..+||+|||||++||++|+.|++.|+ +|+|+|+++++||++.+.. ..|..+|.|++++.+ ....+.+++++ +|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lg 81 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FAGINVELGANWVEGVNGGKMNPIWPIVNSTLK 81 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEE-ETTEEEESSCCEEEEESSSSCCTHHHHHHTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecc-cCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcC
Confidence 46799999999999999999999998 8999999999999998865 478899999999973 33457889999 89
Q ss_pred CCCccccc-ccc-eeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccc
Q 009372 130 INDRLQWK-EHS-MIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGL 207 (536)
Q Consensus 130 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (536)
+....... ... .++. .++.. .+ .......+... .........+.... .. ...++.
T Consensus 82 l~~~~~~~~~~~~~~~~---~~g~~--------~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~--~~~~~~ 138 (472)
T 1b37_A 82 LRNFRSDFDYLAQNVYK---EDGGV--------YD--EDYVQKRIELA-----DSVEEMGEKLSATL---HA--SGRDDM 138 (472)
T ss_dssp CCEEECCCTTGGGCEEC---SSSSB--------CC--HHHHHHHHHHH-----HHHHHHHHHHHHTS---CT--TCTTCC
T ss_pred CceeeccCccccceeEc---CCCCC--------CC--HHHHHHHHHHH-----HHHHHHHHHHHHhh---cc--ccchhh
Confidence 87532110 000 0110 01111 11 11111111100 00000000000000 00 112334
Q ss_pred cHHH--HHHHcCC--ChHHHHHHHHHHHhh-cCCCCCccccHHHHHHHHHHHhhhcCCCeEEEe--cCCCCccchHHHHH
Q 009372 208 TVQE--WMRKQGV--PDRVTTEVFIAMSKA-LNFINPDELSMQCILIALNRFLQEKHGSKMAFL--DGNPPERLCLPIVE 280 (536)
Q Consensus 208 s~~~--~l~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~gg~~~~l~~~l~~ 280 (536)
++.+ ++.+... .....+.++..+... .+..+++..+...... ...+.. .+....+. .|| +..+++.|.+
T Consensus 139 s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~~--~~~~~~~~~~~gG-~~~l~~~l~~ 214 (472)
T 1b37_A 139 SILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVP-LATFSD--FGDDVYFVADQRG-YEAVVYYLAG 214 (472)
T ss_dssp BHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSS-CHHHHH--HCSEEEEECCTTC-TTHHHHHHHH
T ss_pred hHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccc-cccccc--cCCceeeeecCCc-HHHHHHHHHH
Confidence 4432 4444321 111112233332211 1122333333211100 000111 12222222 444 7899999988
Q ss_pred HHHHc--------CcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC--CcchhcHHHHHHhc
Q 009372 281 HIQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP--ENWKEMAYFKRLEK 350 (536)
Q Consensus 281 ~l~~~--------G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~--~~~~~~~~~~~l~~ 350 (536)
.+.+. |++|+++++|++|..++++ + .|++.+|++++||+||+|+|++.+..++. .+.+|..+.+++++
T Consensus 215 ~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~ 292 (472)
T 1b37_A 215 QYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQ 292 (472)
T ss_dssp TTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHH
T ss_pred hccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHh
Confidence 87665 6799999999999985444 4 48899998899999999999999888652 33445566788888
Q ss_pred cCCccEEEEEEEeeeccccCcccccccCccccccC--CcceeeeccccCcccccCCCccEEEEEEec--chhhccCChHH
Q 009372 351 LVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSRS--SLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSE 426 (536)
Q Consensus 351 ~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ee 426 (536)
+.+.+..|+.+. |+++||+.-. .....++.+. ....++... .+ .. ++..++..++.+ +..|..+++++
T Consensus 293 ~~~~~~~kv~l~--~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~---~~-~~-p~~~~l~~~~~~~~a~~~~~~~~~e 364 (472)
T 1b37_A 293 FDMAVYTKIFLK--FPRKFWPEGK-GREFFLYASSRRGYYGVWQEF---EK-QY-PDANVLLVTVTDEESRRIEQQSDEQ 364 (472)
T ss_dssp SEEECEEEEEEE--CSSCCSCCST-TCSEEEECCSSTTSSCEEEEC---TT-TS-TTCCEEEEEEEHHHHHHHHTSCHHH
T ss_pred cCCcceeEEEEE--CCCcCCCCCC-CcceEEecccCCccceeeecc---cC-CC-CCCCEEEEEechHHHHHHHhCCHHH
Confidence 888888888776 8888887521 1111222111 111222111 11 12 344444444432 24677889999
Q ss_pred HHHHHHHHHHHhCCCCcccccccceEEEEEEeecCC--cccc-cCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchhH
Q 009372 427 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEG 502 (536)
Q Consensus 427 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~-~~~~~~-~~~~~~~~p~~~l~~aG~~~~~~~~~~i~g 502 (536)
+.+.++++|++++|......+. .+...+|...|+ +.|. +.++.. ...+.+++|++||||||+++++.++|+++|
T Consensus 365 ~~~~~l~~L~~~~Pg~~~~~~~--~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~G 442 (472)
T 1b37_A 365 TKAEIMQVLRKMFPGKDVPDAT--DILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHG 442 (472)
T ss_dssp HHHHHHHHHHHHCTTSCCCCCS--EEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCc--eEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhH
Confidence 9999999999999753212111 122223333343 3333 234432 124556889999999999999877799999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009372 503 AVLSGKLCAQAIVQDYVL 520 (536)
Q Consensus 503 A~~SG~~aA~~ll~~l~~ 520 (536)
|++||++||++|++.++.
T Consensus 443 A~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 443 AYLSGIDSAEILINCAQK 460 (472)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998765
No 17
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=1.4e-34 Score=298.06 Aligned_cols=426 Identities=17% Similarity=0.171 Sum_probs=236.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CceEEEecCCccCceeeeeccCCCCeeeeceeeeccCc-chHHHHHHHhCCCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAY-PNIQNLFGELGINDR 133 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g-~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~-~~~~~l~~~lg~~~~ 133 (536)
..+||+|||||++||+||+.|++.| ++|+|||+++++||++.+.....|+.+|.|++++.+.. ..+.+++.++|+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~ 86 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDG 86 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCc
Confidence 3579999999999999999999999 99999999999999999875336899999999998653 345666677765211
Q ss_pred ---ccccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHH
Q 009372 134 ---LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (536)
Q Consensus 134 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (536)
..+....... ....... ........+..+ ........... ... ....++.++.
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~---------------~~~~~~~~~~~--~~~-~~~~~d~s~~ 142 (516)
T 1rsg_A 87 RTRFVFDDDNFIY-IDEERGR-----VDHDKELLLEIV---------------DNEMSKFAELE--FHQ-HLGVSDCSFF 142 (516)
T ss_dssp CCCEECCCCCCEE-EETTTEE-----CTTCTTTCHHHH---------------HHHHHHHHHHH--C--------CCBHH
T ss_pred ceeEEECCCCEEE-EcCCCcc-----ccccHHHHHHHH---------------HHHHHHHHHHH--hhh-ccCCCCCCHH
Confidence 1111111110 0000000 000000000000 00000000000 000 0112346777
Q ss_pred HHHHHc------CCChHHHHHHHHHHHh---hcCCCCCccccHHHHHHHHHHHhhhcCCCeEEEecCCCCccchHHHHHH
Q 009372 211 EWMRKQ------GVPDRVTTEVFIAMSK---ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (536)
Q Consensus 211 ~~l~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~ 281 (536)
+|+.+. .+... ...++..+.. ...+.+++.++..... ....+. ..+..+ ++.+++.|.+.
T Consensus 143 ~~l~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~g~~~~~~s~~~~~-------~~~~~~-~~~~~g--~~~l~~~l~~~ 211 (516)
T 1rsg_A 143 QLVMKYLLQRRQFLTND-QIRYLPQLCRYLELWHGLDWKLLSAKDTY-------FGHQGR-NAFALN--YDSVVQRIAQS 211 (516)
T ss_dssp HHHHHHHHHHGGGSCHH-HHHHHHHHHGGGHHHHTBCTTTSBHHHHC-------CCCSSC-CEEESC--HHHHHHHHHTT
T ss_pred HHHHHHHHHhhcccCHH-HHHHHHHHHHHHHHHhCCChHHCChHHHH-------hhccCc-chhhhC--HHHHHHHHHHh
Confidence 776542 11111 1112222221 1234455666654321 111222 223333 45555555554
Q ss_pred HHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhc-----------CCCcchhcHHHHHHhc
Q 009372 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ-----------LPENWKEMAYFKRLEK 350 (536)
Q Consensus 282 l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~l-----------l~~~~~~~~~~~~l~~ 350 (536)
+. +++|++|++|++|..++++. +.|++.+|++++||+||+|+|+.+++.. ...+.+|..+.+++++
T Consensus 212 l~--~~~i~~~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~ 288 (516)
T 1rsg_A 212 FP--QNWLKLSCEVKSITREPSKN-VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDK 288 (516)
T ss_dssp SC--GGGEETTCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTS
T ss_pred CC--CCEEEECCEEEEEEEcCCCe-EEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHh
Confidence 43 25799999999999843333 4688999988999999999999998642 2122356677788999
Q ss_pred cCCccEEEEEEEeeeccccCcccccccCccccccCCcceeeecc----------------------ccCcc----c-ccC
Q 009372 351 LVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSRSSLLSVYADM----------------------SLTCK----E-YYN 403 (536)
Q Consensus 351 ~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------s~~~~----~-~~~ 403 (536)
+.+.+..|+.+. |+++||+.....+.......+++...+... ....+ + ...
T Consensus 289 ~~~~~~~Kv~l~--f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (516)
T 1rsg_A 289 IHFGALGKVIFE--FEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKS 366 (516)
T ss_dssp SCCCCCEEEEEE--ESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHH
T ss_pred CCCCcceEEEEE--eCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeec
Confidence 999999998876 899998753211111100000110000000 00000 0 011
Q ss_pred CCc-cEEEEEEecc-hhhccC--ChHHHHH---HHHHHHHHhCCC-----Ccc-cc-------cccceEEEEEEeecCCc
Q 009372 404 PNQ-SMLELVFAPA-EEWISC--SDSEIID---ATMKELAKLFPD-----EIS-AD-------QSKAKIVKYHVVKTPRS 463 (536)
Q Consensus 404 ~~~-~~~~~~~~~~-~~~~~~--~~ee~~~---~~~~~L~~~~~~-----~~~-~~-------~~~~~~~~~~~~~~p~~ 463 (536)
.+. .+++++.++. ..+..+ +++++.+ .++++|.++|+. ... +. +....+...+|...|++
T Consensus 367 ~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~ 446 (516)
T 1rsg_A 367 TGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYS 446 (516)
T ss_dssp TSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTT
T ss_pred CCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCC
Confidence 233 3443333333 445566 7888765 477777777762 111 10 11113445556666664
Q ss_pred --cccc-CCCCCCC--CCCCC-CCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009372 464 --VYKT-IPNCEPC--RPLQR-SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 521 (536)
Q Consensus 464 --~~~~-~~~~~~~--~~~~~-~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~ 521 (536)
.|++ .++.... ...+. .+.++||||||+|+..++|+++||++||+|||++|++.++..
T Consensus 447 ~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 447 RGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp TTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 4443 3343111 11222 367899999999999888999999999999999999987754
No 18
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=1.1e-33 Score=299.03 Aligned_cols=414 Identities=19% Similarity=0.218 Sum_probs=240.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcc-hHHHHHHHhCCCCc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYP-NIQNLFGELGINDR 133 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~-~~~~l~~~lg~~~~ 133 (536)
...+||+|||||++||+||+.|++.|++|+|+|+++++||++.+....+|..+|.|++++.+... .+..+.+++|++..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMH 413 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCccc
Confidence 45689999999999999999999999999999999999999998766678999999999976544 36778899998743
Q ss_pred ccccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhccccccccccccc-----
Q 009372 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT----- 208 (536)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----- 208 (536)
..... ..++. ..+... .+.........+ ............. .......+
T Consensus 414 ~~~~~-~~l~~---~~g~~~-------~~~~~~~~~~~~--------~~ll~~~~~~~~~-------~~~~~d~sl~~~~ 467 (776)
T 4gut_A 414 KFGER-CDLIQ---EGGRIT-------DPTIDKRMDFHF--------NALLDVVSEWRKD-------KTQLQDVPLGEKI 467 (776)
T ss_dssp ECCSC-CCEEC---TTSCBC-------CHHHHHHHHHHH--------HHHHHHHHHHGGG-------CCGGGCCBHHHHH
T ss_pred ccccc-cceEc---cCCccc-------chhHHHHHHHHH--------HHHHHHHHHHhhc-------ccccccccHHHHH
Confidence 21111 01110 111110 000000000000 0000000000000 00001122
Q ss_pred ---HHHHHHHcCCChHHHHHH-H---HHHHhhcCCCCCccccHHHHHHHHHHHhhhcCCCeEEEecCCCCccchHHHHHH
Q 009372 209 ---VQEWMRKQGVPDRVTTEV-F---IAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEH 281 (536)
Q Consensus 209 ---~~~~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~ 281 (536)
+.++++..++.....+.. + ........+.....++...... .......+.....+.+| ...+++.|.
T Consensus 468 ~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~---~~~~~~~~G~~~~~~~G-~~~l~~aLa-- 541 (776)
T 4gut_A 468 EEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDH---NEFFAQFAGDHTLLTPG-YSVIIEKLA-- 541 (776)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTG---GGGSCCCCSCEEECTTC-THHHHHHHH--
T ss_pred HHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhh---hhhHHhcCCCeEEECCh-HHHHHHHHH--
Confidence 334445444432211110 0 0000111112222222211000 00001122333444444 444444443
Q ss_pred HHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhc--CCCcchhcHHHHHHhccCCccEEEE
Q 009372 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ--LPENWKEMAYFKRLEKLVGVPVINI 359 (536)
Q Consensus 282 l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~l--l~~~~~~~~~~~~l~~~~~~~~~~v 359 (536)
.|++|+++++|++|..++++ + .|++.+|+++.||+||+|+|+.+++.. ...+.+|....++++++.+.++.|+
T Consensus 542 ---~gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV 616 (776)
T 4gut_A 542 ---EGLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKI 616 (776)
T ss_dssp ---TTSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEE
T ss_pred ---hCCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEE
Confidence 37899999999999985554 3 488889988999999999999998752 2233345566788888888888888
Q ss_pred EEEeeeccccCcccccccCcc--cc---ccCCcceeeeccccCcccccCCC-ccEEEEEEec--chhhccCChHHHHHHH
Q 009372 360 HIWVFFNCRFDRKLKNTYDHL--LF---SRSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDAT 431 (536)
Q Consensus 360 ~l~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~ee~~~~~ 431 (536)
.+. |+++||+......+.. +. .+..+..++.+.+ +.+ ..++..++.+ +..+..++++++++.+
T Consensus 617 ~l~--f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~-------p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~ 687 (776)
T 4gut_A 617 ALQ--FPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD-------PQKKHSVLMSVIAGEAVASVRTLDDKQVLQQC 687 (776)
T ss_dssp EEE--CSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC-------TTSCSCEEEEEECTHHHHHHHTSCHHHHHHHH
T ss_pred EEe--cCcccccccCCCCceEEeecCCcCCCceEEEEecCC-------CCCCceEEEEEecchhHHHHHcCCHHHHHHHH
Confidence 876 9999988531111111 11 1122233332321 222 2344444433 3667789999999999
Q ss_pred HHHHHHhCCCCcccccccceEEEEEEeecCC--cccccC-CCC-CCCCCCCCCCC-CCeEEecccccCCCCCchhHHHHH
Q 009372 432 MKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYKTI-PNC-EPCRPLQRSPV-EGFYLAGDYTKQKYLASMEGAVLS 506 (536)
Q Consensus 432 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~-~~~-~~~~~~~~~p~-~~l~~aG~~~~~~~~~~i~gA~~S 506 (536)
+++|.++||....+.+ ..+...+|...|+ |.|.+. ++. ....+.+..|+ ++||||||+++..|+|+++||++|
T Consensus 688 l~~L~~ifg~~~~~~P--~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~S 765 (776)
T 4gut_A 688 MATLRELFKEQEVPDP--TKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLS 765 (776)
T ss_dssp HHHHHHHTTTSCCCCC--SEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHH
T ss_pred HHHHHHHhCcccccCc--ceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHH
Confidence 9999999986432222 1234445555555 344432 232 22233445664 899999999999888999999999
Q ss_pred HHHHHHHHHH
Q 009372 507 GKLCAQAIVQ 516 (536)
Q Consensus 507 G~~aA~~ll~ 516 (536)
|++||++|++
T Consensus 766 G~RaA~~Ila 775 (776)
T 4gut_A 766 GVREASKIAA 775 (776)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999999975
No 19
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=100.00 E-value=6.3e-32 Score=274.51 Aligned_cols=418 Identities=16% Similarity=0.167 Sum_probs=268.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCcc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g-~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (536)
..+||+|||||++||+||++|++.| .+|+|+|+++++||++.+....+|+.+|.|++.+...++.+.++++++. +...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~~ 86 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGWN 86 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhhh
Confidence 4689999999999999999999998 7999999999999999985446899999999999877788889999875 2211
Q ss_pred cccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHHHH
Q 009372 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (536)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (536)
.......++ . .+....+.+.. .+ ..+......+....++... ......+..++.+|++
T Consensus 87 ~~~~~~~~~-~---~g~~~~~P~~~----~~----------~~l~~~~~~~~~~~ll~~~----~~~~~~~~~s~~e~~~ 144 (484)
T 4dsg_A 87 VLQRESWVW-V---RGRWVPYPFQN----NI----------HRLPEQDRKRCLDELVRSH----ARTYTEPPNNFEESFT 144 (484)
T ss_dssp EEECCCEEE-E---TTEEEESSGGG----CG----------GGSCHHHHHHHHHHHHHHH----HCCCSSCCSSHHHHHH
T ss_pred hccCceEEE-E---CCEEEEeCccc----hh----------hhCCHHHHHHHHHHHHHHH----hccCCCCCCCHHHHHH
Confidence 111111111 1 12221111000 00 0111111211111111110 0012235689999998
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHH---------HHHHHHHhhhc------CCCeEEEec-CCCCccchHHH
Q 009372 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCI---------LIALNRFLQEK------HGSKMAFLD-GNPPERLCLPI 278 (536)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~------~g~~~~~~~-gg~~~~l~~~l 278 (536)
+. +...+.+.++.++..+.++.+++++++... ...+...+... ....+.|+. || ++.+++.|
T Consensus 145 ~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG-~~~l~~~l 222 (484)
T 4dsg_A 145 RQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGG-TGIIYQAI 222 (484)
T ss_dssp HH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSC-THHHHHHH
T ss_pred HH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCC-HHHHHHHH
Confidence 87 666777778888888888888888776431 11122222211 122345544 44 88999999
Q ss_pred HHHHHHcCcEEEeC--cceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCC--cchhcHHHHHHhccCCc
Q 009372 279 VEHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMAYFKRLEKLVGV 354 (536)
Q Consensus 279 ~~~l~~~G~~i~~~--~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~--~~~~~~~~~~l~~~~~~ 354 (536)
++.+.+. +|+++ ++|++|..+ ++. |++.+|+++.||+||+|+|++.+.+++++ ...+....+.+..+.|.
T Consensus 223 a~~l~~~--~i~~~~~~~V~~I~~~-~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~ 296 (484)
T 4dsg_A 223 KEKLPSE--KLTFNSGFQAIAIDAD-AKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYS 296 (484)
T ss_dssp HHHSCGG--GEEECGGGCEEEEETT-TTE---EEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEE
T ss_pred HhhhhhC--eEEECCCceeEEEEec-CCE---EEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcC
Confidence 9887553 78899 569999874 332 55688888999999999999999998854 22345566778899999
Q ss_pred cEEEEEEEeeeccccCcccccccCccccccCC-cceeeeccccCcccccCCCccEEEEEEecchhhccCChHHHHHHHHH
Q 009372 355 PVINIHIWVFFNCRFDRKLKNTYDHLLFSRSS-LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMK 433 (536)
Q Consensus 355 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~ 433 (536)
++.++.+. |+.+....+.. ..++.+++.. ........++.++...+++.+++...+... +....+++++++.+++
T Consensus 297 s~~~v~l~--~~~~~~~~~~~-~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~-~~~~~~d~~l~~~a~~ 372 (484)
T 4dsg_A 297 STNVIGIG--VKGTPPPHLKT-ACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES-KYKPVNHSTLIEDCIV 372 (484)
T ss_dssp EEEEEEEE--EESCCCGGGTT-CCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB-TTBCCCTTSHHHHHHH
T ss_pred ceEEEEEE--EcCCCcccCCC-CeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC-cCCcCCHHHHHHHHHH
Confidence 99888887 44432221211 1222223221 111222345566666667766555444333 3346789999999999
Q ss_pred HHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCC----CCCCCCCCCCCeEEecccccCCCC-CchhHHHHHHH
Q 009372 434 ELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGK 508 (536)
Q Consensus 434 ~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~p~~~l~~aG~~~~~~~~-~~i~gA~~SG~ 508 (536)
+|.++...... ..+....+.+|+.+.+.+.++... .+..+.. . ||+++|......|. ..+++|+.||+
T Consensus 373 ~L~~~~~~~~~-----~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d~~i~sg~ 445 (484)
T 4dsg_A 373 GCLASNLLLPE-----DLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFGAWRYEVGNQDHSFMQGV 445 (484)
T ss_dssp HHHHTTSCCTT-----CCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTTTCCGGGCSHHHHHHHHH
T ss_pred HHHHcCCCCcc-----ceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHh-C-CcEeecCCcccccCCCChHHHHHHHH
Confidence 99998643211 124444567888888888776322 1222222 3 89999998777653 37999999999
Q ss_pred HHHHHHH
Q 009372 509 LCAQAIV 515 (536)
Q Consensus 509 ~aA~~ll 515 (536)
.||+.|+
T Consensus 446 ~aa~~i~ 452 (484)
T 4dsg_A 446 EAIDHVL 452 (484)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999998
No 20
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.98 E-value=1.8e-31 Score=283.74 Aligned_cols=238 Identities=18% Similarity=0.212 Sum_probs=157.4
Q ss_pred EecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcC------CcEEEcCEEEEccCHHHHhhcC---
Q 009372 265 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL--- 335 (536)
Q Consensus 265 ~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~------g~~i~ad~VI~a~~~~~l~~ll--- 335 (536)
.+.|| ++.|++.|.+ +++|++|++|++|..++++ +.|++.+ |++++||+||+|+|+.++++++
T Consensus 566 ~~~gG-~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~g--V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I 637 (852)
T 2xag_A 566 TVRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASG--CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 637 (852)
T ss_dssp EETTC-TTHHHHHHTT-----TCCEECSEEEEEEEEETTE--EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred EecCc-HHHHHHHHHh-----CCCEEeCCeEEEEEEcCCc--EEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhccc
Confidence 34444 6777776664 4689999999999986555 3476655 5689999999999999998843
Q ss_pred -CCcchhcHHHHHHhccCCccEEEEEEEeeeccccCcccccccCccccc--cCCcceeeeccccCcccccCCCccEEEEE
Q 009372 336 -PENWKEMAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFS--RSSLLSVYADMSLTCKEYYNPNQSMLELV 412 (536)
Q Consensus 336 -~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 412 (536)
..+.+|....++++++.+.++.|+.+. |+++||+.....++..... ......++++.+ ....+++++
T Consensus 638 ~F~P~LP~~k~~AI~~l~~g~v~KV~L~--F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~--------~~pvLl~~v 707 (852)
T 2xag_A 638 QFVPPLPEWKTSAVQRMGFGNLNKVVLC--FDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY--------KAPILLALV 707 (852)
T ss_dssp EEESCCCHHHHHHHHHSEECCCEEEEEE--CSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS--------SSSEEEEEE
T ss_pred ccCCCCCHHHHHHHHcCCccceEEEEEE--cCCcccCCCCCeeeeeccccCCCCceEEEecCC--------CCCEEEEEe
Confidence 223445556778999999999998876 8888887532222222111 111222222211 112333333
Q ss_pred Eec-chhhccCChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCC--ccccc-CCCCC-CC-------------
Q 009372 413 FAP-AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYKT-IPNCE-PC------------- 474 (536)
Q Consensus 413 ~~~-~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~-~~~~~-~~------------- 474 (536)
.+. +..+..++++++++.++++|.++|+....+.+. .+...+|...|+ |.|.+ .++.. ..
T Consensus 708 ~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~--~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~ 785 (852)
T 2xag_A 708 AGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPK--ETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPS 785 (852)
T ss_dssp CHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCS--EEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCS
T ss_pred cCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCce--EEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccc
Confidence 232 356778899999999999999999864322211 233444544455 34443 23421 11
Q ss_pred CCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 009372 475 RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 522 (536)
Q Consensus 475 ~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~~ 522 (536)
++.+..+.+||||||++++..|+|+++||++||++||++|++.+....
T Consensus 786 ~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~ 833 (852)
T 2xag_A 786 IPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAM 833 (852)
T ss_dssp STTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCG
T ss_pred cccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 122345568999999999988889999999999999999999886543
No 21
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.98 E-value=1.2e-31 Score=282.37 Aligned_cols=236 Identities=19% Similarity=0.215 Sum_probs=154.2
Q ss_pred EecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcC------CcEEEcCEEEEccCHHHHhhcC---
Q 009372 265 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL--- 335 (536)
Q Consensus 265 ~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~------g~~i~ad~VI~a~~~~~l~~ll--- 335 (536)
.+.|| ++.|++.|.+ +++|++|++|++|..++++ +.|++.+ |++++||+||+|+|+.+++++.
T Consensus 395 ~~~gG-~~~l~~~La~-----~l~I~l~~~V~~I~~~~~~--v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i 466 (662)
T 2z3y_A 395 TVRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASG--CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 466 (662)
T ss_dssp EETTC-TTHHHHHHTT-----TCEEETTEEEEEEEEETTE--EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred eecCc-HHHHHHHHHh-----cCceecCCeEEEEEECCCc--EEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCce
Confidence 33444 6777666654 5799999999999986555 3477665 5689999999999999998742
Q ss_pred -CCcchhcHHHHHHhccCCccEEEEEEEeeeccccCcccccccCcccccc--CCcceeeeccccCcccccCCCccEEEEE
Q 009372 336 -PENWKEMAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSR--SSLLSVYADMSLTCKEYYNPNQSMLELV 412 (536)
Q Consensus 336 -~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 412 (536)
..+.+|....++++++.+.++.|+.+. |+++||+.....++...... ......+++.+ ....+++++
T Consensus 467 ~f~P~LP~~k~~Ai~~l~~g~~~KV~l~--f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~--------~~~vL~~~~ 536 (662)
T 2z3y_A 467 QFVPPLPEWKTSAVQRMGFGNLNKVVLC--FDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY--------KAPILLALV 536 (662)
T ss_dssp EEESCCCHHHHHHHHHSEECCCEEEEEE--CSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS--------SSSEEEEEE
T ss_pred EEcCCCCHHHHHHHHhCCccceeEEEEE--cCcccccCCCCceeeecCCCCCCCceeEEEeCC--------CCCEEEEEe
Confidence 233455566788999999999998877 88888875322222221111 11222222211 122333333
Q ss_pred Eec-chhhccCChHHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCC--ccccc-CCCCCC-C-------------
Q 009372 413 FAP-AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYKT-IPNCEP-C------------- 474 (536)
Q Consensus 413 ~~~-~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~-~~~~~~-~------------- 474 (536)
.+. +..+..++++++++.++++|.++||....+.+. .+...+|...|+ |.|.+ .++... .
T Consensus 537 ~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~--~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~ 614 (662)
T 2z3y_A 537 AGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPK--ETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPS 614 (662)
T ss_dssp CTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCS--EEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---
T ss_pred ccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCc--eeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccc
Confidence 332 356778899999999999999999864322221 233444545555 34443 333211 1
Q ss_pred CCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 009372 475 RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 520 (536)
Q Consensus 475 ~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~ 520 (536)
++...++.+||||||++|+..|+|+++||++||++||++|++.+..
T Consensus 615 ~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 615 IPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp ------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence 1223455689999999999988899999999999999999987653
No 22
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.97 E-value=6.5e-31 Score=271.52 Aligned_cols=452 Identities=13% Similarity=0.071 Sum_probs=251.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC--------CceEEEecCC-cc----------------CceeeeeccC------CCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAG--------HKPLLLEARD-VL----------------GGKIAAWKDG------DGD 105 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g--------~~V~vlE~~~-~~----------------GG~~~~~~~~------~g~ 105 (536)
.++|+|||||++||+||+.|++.| ++|+|+|+++ ++ ||++.+.... ++.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~ 135 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDT 135 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCc
Confidence 479999999999999999999998 9999999999 99 9999886532 458
Q ss_pred eeeeceeeeccCcchHHHHHHHh-CCCC--cccccc--cceeeeccC----CCCcc-ccccCCCC-CCcchhHHHHHHhc
Q 009372 106 WYETGLHIFFGAYPNIQNLFGEL-GIND--RLQWKE--HSMIFAMPN----KPGEF-SRFDFPEV-LPAPLNGILAILRN 174 (536)
Q Consensus 106 ~~d~G~~~~~~~~~~~~~l~~~l-g~~~--~~~~~~--~~~~~~~~~----~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 174 (536)
.+|.|++++...++.+.++++++ |++. ...... ....+...+ ..+.. ..+..... .+..+..+...+..
T Consensus 136 ~~e~G~~~~~~~~~~~~~~~~~l~gl~~~~~~~~~~~~~~~~i~~~~~i~~~~g~~~~~~~~~~~p~p~~~~~v~~~~~~ 215 (721)
T 3ayj_A 136 IYEVGAMRFPEIAGLTWHYASAAFGDAAPIKVFPNPGKVPTEFVFGNRVDRYVGSDPKDWEDPDSPTLKVLGVVAGGLVG 215 (721)
T ss_dssp EEECSCCCEETTCHHHHHHHHHHHCTTCBCCBCCCBTTBCEEEEETTEEEEESSSCGGGBSSTTCHHHHHHHHHHHHHTC
T ss_pred EEecCCEEecCccHHHHHHHHHhcCCcccccccccCCCCceEEEecCceeeecCccceecccccccCHHHHHHHHHHHHH
Confidence 89999999998888889999999 9862 111111 111120000 00111 00000000 01111111111110
Q ss_pred CCC---C---Chh----HHHH-hhccc------------------chh------hhcccccc-cccccccH---HHHHHH
Q 009372 175 NEM---L---TWP----EKVK-FAIGL------------------LPA------IIGGQAYV-EAQDGLTV---QEWMRK 215 (536)
Q Consensus 175 ~~~---~---~~~----~~~~-~~~~~------------------~~~------~~~~~~~~-~~~~~~s~---~~~l~~ 215 (536)
... . ... .++. ..... +.. ...+...+ .+.+..|+ .+|++.
T Consensus 216 ~~~e~~~~~~~~~~~~p~~v~~ll~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~w~~lla~~~d~~S~~~~~~~L~~ 295 (721)
T 3ayj_A 216 NPQGENVAMYPIANVDPAKIAAILNAATPPADALERIQTKYWPEFIAQYDGLTLGAAVREIVTVAFEKGTLPPVDGVLDV 295 (721)
T ss_dssp CSSSSCCCSSCBTTBCHHHHHHHHTCSSCCHHHHHHHHHTHHHHHHHHHTTBBHHHHHHHHHHHHHHHTSSCCGGGTSCH
T ss_pred HhhhcccccccccccchhhHHHHHHhhhcchhhhhhhhhhhhhhhhhhhccchhhhHHHHHHHHhhcccchhHHHHHHHh
Confidence 000 0 000 0000 00000 000 00000000 11222333 333321
Q ss_pred cCCChHHH--HHHHHHHHhhcCC-CCCccccHHHHHHHHHHHhhhcCCCeEEEecCCCCccchHHHHHHHHHcCcEEEeC
Q 009372 216 QGVPDRVT--TEVFIAMSKALNF-INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLN 292 (536)
Q Consensus 216 ~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~ 292 (536)
. ..+. .+.+..+.....+ ......+....+... + ...+..+..+.|| +..|+++|++.+.+ |..|+++
T Consensus 296 ~---~~~s~~~~~~~~~~~~~gg~~~~~~~S~le~L~~~---~-~~~~~~~~~i~GG-~~~L~~aLa~~l~~-g~~I~l~ 366 (721)
T 3ayj_A 296 D---ESISYYVELFGRFGFGTGGFKPLYNISLVEMMRLI---L-WDYSNEYTLPVTE-NVEFIRNLFLKAQN-VGAGKLV 366 (721)
T ss_dssp H---HHHHHHHHHHHHHCSSSSCCGGGTTBBHHHHHHHH---H-TTTTCEECCSSSS-THHHHHHHHHHHHH-HTTTSEE
T ss_pred c---cccHHHHHHHHHHhhccCCCCCccchhHHHHHHHH---h-cCCccceeEECCc-HHHHHHHHHHhccc-CCceEeC
Confidence 0 0111 1112211111111 122345555443322 1 2234455566666 78999999998753 5678899
Q ss_pred cceE--EEEEcCCCC-----EEEE-EEcCCc--EEEcCEEEEccCHHHHhh------cC-------C-------------
Q 009372 293 SRVQ--KIELNDDGT-----VKNF-LLTNGN--VIDGDAYVFATPVDILKL------QL-------P------------- 336 (536)
Q Consensus 293 ~~V~--~I~~~~~g~-----~~~v-~~~~g~--~i~ad~VI~a~~~~~l~~------ll-------~------------- 336 (536)
++|+ +|.+++++. .+.| .+.+|+ +++||+||+|+|+..+.. +- .
T Consensus 367 ~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~ 446 (721)
T 3ayj_A 367 VQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQ 446 (721)
T ss_dssp EEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEE
T ss_pred CEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccc
Confidence 9999 999864441 2346 445676 799999999999998853 32 1
Q ss_pred --Ccch-h-------cHHHHHHhccCCccEEEEEEEeee-----ccccCcccccccCccccccCCcceeeeccccCcccc
Q 009372 337 --ENWK-E-------MAYFKRLEKLVGVPVINIHIWVFF-----NCRFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEY 401 (536)
Q Consensus 337 --~~~~-~-------~~~~~~l~~~~~~~~~~v~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 401 (536)
++.+ + .....+++++++.+..|+.+. | +++||+..........+++.++..+|..+++....+
T Consensus 447 ~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~--~~~~~~~~~fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~ 524 (721)
T 3ayj_A 447 VYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFAT--VKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDG 524 (721)
T ss_dssp EBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEE--EEGGGGGSTTSCEETTEECCEEEETTTTEEEEEEECSCC---
T ss_pred cCCcccCCcccccccHHHHHHHHhcCcccceEEEEE--EccccCCCCcccccCCCCceeeecCCCcceEEEeccCccccc
Confidence 1212 4 567788999999999998876 8 889998752112224566666655543221110112
Q ss_pred cCCCccEEEE-E-Eec-chhh------ccCChHHH-------HHHHHHHHH--HhCCCCcc----------cccccceEE
Q 009372 402 YNPNQSMLEL-V-FAP-AEEW------ISCSDSEI-------IDATMKELA--KLFPDEIS----------ADQSKAKIV 453 (536)
Q Consensus 402 ~~~~~~~~~~-~-~~~-~~~~------~~~~~ee~-------~~~~~~~L~--~~~~~~~~----------~~~~~~~~~ 453 (536)
.+++..++.. + .++ +..| ..++.++. ++.++++|. +++|.... .......+.
T Consensus 525 ~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 604 (721)
T 3ayj_A 525 QAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRF 604 (721)
T ss_dssp -CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCE
T ss_pred CCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhcccCceE
Confidence 2333343332 2 222 3566 44444444 999999999 89986320 000012245
Q ss_pred EEEEeecCCcccc---cCCCC-------CCCC--CCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009372 454 KYHVVKTPRSVYK---TIPNC-------EPCR--PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 521 (536)
Q Consensus 454 ~~~~~~~p~~~~~---~~~~~-------~~~~--~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~ 521 (536)
.+.|...| +.-+ +.|+. ..+. .....+.++||||||+++. ++||+|||++||++||.+|+..+...
T Consensus 605 ~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~ 682 (721)
T 3ayj_A 605 VFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRANRG 682 (721)
T ss_dssp EEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhcCC
Confidence 66777676 4322 23442 1111 2234567899999999986 67999999999999999999987664
No 23
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.97 E-value=2.7e-29 Score=245.13 Aligned_cols=223 Identities=14% Similarity=0.130 Sum_probs=154.7
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCc--chhcHHHHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN--WKEMAYFKRL 348 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~--~~~~~~~~~l 348 (536)
+..+++.|.+.+ |++|+++++|++|..++++ + .|++.+|+++.||.||+|+|+..+.+|+++. .+|......+
T Consensus 111 ~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l 185 (342)
T 3qj4_A 111 ISSIIKHYLKES---GAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQL 185 (342)
T ss_dssp TTHHHHHHHHHH---TCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHH
Confidence 667777777655 8999999999999986555 3 4888888779999999999999999998752 2344567889
Q ss_pred hccCCccEEEEEEEeeeccccCcccccccCccccccCCcce-eeeccccCccccc-CCCccEEEEEEec--chhhccCCh
Q 009372 349 EKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSRSSLLS-VYADMSLTCKEYY-NPNQSMLELVFAP--AEEWISCSD 424 (536)
Q Consensus 349 ~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~ 424 (536)
.+++|.++.++.+. |++++|.+. ++.+...++.+... ++.+.+. +... +++..++.....+ +.++.++++
T Consensus 186 ~~~~~~~~~~v~l~--~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~k--~~r~~~~~~~~~v~~~~~~~~~~~~~~~~ 259 (342)
T 3qj4_A 186 EAVSYSSRYALGLF--YEAGTKIDV--PWAGQYITSNPCIRFVSIDNKK--RNIESSEIGPSLVIHTTVPFGVTYLEHSI 259 (342)
T ss_dssp HTCCBCCEEEEEEE--CSSCC--CC--SCSEEECSSCSSEEEEEEHHHH--TTCCCC-CCCEEEEEECHHHHHHTTTSCH
T ss_pred hcCCccccEEEEEE--ECCCCccCC--ceeeEEccCCcceEEEEccccC--CCCCCCCCCceEEEECCHHHHHHhhcCCH
Confidence 99999999998887 776666543 34455544444333 3333222 2211 2222233222222 245667899
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCCCCCCCC--CCCCCeEEecccccCCCCCchhH
Q 009372 425 SEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQR--SPVEGFYLAGDYTKQKYLASMEG 502 (536)
Q Consensus 425 ee~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~p~~~l~~aG~~~~~~~~~~i~g 502 (536)
+++.+.++++|.+++|.... +..+...+|.++++.+... .++... ...++|++|||++.. +++|+
T Consensus 260 ~~~~~~~~~~l~~~~g~~~~-------p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g---~~v~~ 326 (342)
T 3qj4_A 260 EDVQELVFQQLENILPGLPQ-------PIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ---SNFDG 326 (342)
T ss_dssp HHHHHHHHHHHHHHSCSCCC-------CSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC---SSHHH
T ss_pred HHHHHHHHHHHHHhccCCCC-------CceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC---CCccH
Confidence 99999999999999984322 2455678888888765331 122222 356899999999976 69999
Q ss_pred HHHHHHHHHHHHHHH
Q 009372 503 AVLSGKLCAQAIVQD 517 (536)
Q Consensus 503 A~~SG~~aA~~ll~~ 517 (536)
|+.||.++|++|++.
T Consensus 327 ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 327 CITSALCVLEALKNY 341 (342)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999764
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.96 E-value=7.3e-28 Score=242.31 Aligned_cols=409 Identities=15% Similarity=0.166 Sum_probs=226.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCcc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g-~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (536)
.++||+|||||++||+||+.|++.| ++|+|+|+++++||++.+.. ..|+.+|.|++++...++.+.++++++|++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~ 83 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDG 83 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCHHHHHHHHHHCCCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcHHHHHHHHHhCCcccc
Confidence 5679999999999999999999999 89999999999999999875 468899999999887778899999999986432
Q ss_pred cccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhccc--ccccccccccHHHH
Q 009372 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQ--AYVEAQDGLTVQEW 212 (536)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~ 212 (536)
. .....+ ...++... .....+.....+...+.. +... ............ .........++.+|
T Consensus 84 ~--~~~~~~--~~~~g~~~---~~~~~~~~~~~~~~~~~~-----l~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 148 (424)
T 2b9w_A 84 P--KLRREF--LHEDGEIY---VPEKDPVRGPQVMAAVQK-----LGQL---LATKYQGYDANGHYNKVHEDLMLPFDEF 148 (424)
T ss_dssp C--CCCEEE--ECTTSCEE---CGGGCTTHHHHHHHHHHH-----HHHH---HHTTTTTTTSSSSSSCCCGGGGSBHHHH
T ss_pred c--ccccee--EcCCCCEe---ccccCcccchhHHHHHHH-----HHHH---HhhhhhhcccccchhhhhhhhccCHHHH
Confidence 1 111111 11112211 000001110000000000 0000 000000000000 00112335899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHH--HhhhcCCCeEEEecCCCCccchHHHHHHHHHcCcEEE
Q 009372 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR--FLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVR 290 (536)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~ 290 (536)
+++.+.+ .+.+.+..++....+ .++.++++...+..... ......+..+ .+.+| ...+++.|.+.+ +.+|+
T Consensus 149 l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~~l~~~l~~~l---~~~v~ 221 (424)
T 2b9w_A 149 LALNGCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGDLW-TWADG-TQAMFEHLNATL---EHPAE 221 (424)
T ss_dssp HHHTTCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTCCB-CCTTC-HHHHHHHHHHHS---SSCCB
T ss_pred HHhhCcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCceE-EeCCh-HHHHHHHHHHhh---cceEE
Confidence 9998765 344444444443333 35677777665432211 1111123333 23444 667777776654 45789
Q ss_pred eCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEEeeeccccC
Q 009372 291 LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWVFFNCRFD 370 (536)
Q Consensus 291 ~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~ 370 (536)
+|++|++|..++ +.+ .|++.+| ++.||+||+|+|++.+.++++.. + ..++.+.++.+.++. +.+. +...++
T Consensus 222 ~~~~V~~i~~~~-~~v-~v~~~~g-~~~ad~Vv~a~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~-~~~~--~~~~~~ 292 (424)
T 2b9w_A 222 RNVDITRITRED-GKV-HIHTTDW-DRESDVLVLTVPLEKFLDYSDAD--D-DEREYFSKIIHQQYM-VDAC--LVKEYP 292 (424)
T ss_dssp CSCCEEEEECCT-TCE-EEEESSC-EEEESEEEECSCHHHHTTSBCCC--H-HHHHHHTTCEEEEEE-EEEE--EESSCC
T ss_pred cCCEEEEEEEEC-CEE-EEEECCC-eEEcCEEEECCCHHHHhhccCCC--H-HHHHHHhcCCcceeE-EEEE--EeccCC
Confidence 999999999754 444 4888888 59999999999999887777642 1 122345555554432 2222 111121
Q ss_pred cccccccCcccccc--CCcc--eeeeccccCcccccCCCccEEEEEEecchhhccCChHHHHHHHHHHHHHhCCCCcccc
Q 009372 371 RKLKNTYDHLLFSR--SSLL--SVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISAD 446 (536)
Q Consensus 371 ~~~~~~~~~~~~~~--~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~ 446 (536)
. ...+...+ .... .++.+.. .+ ..+...++.++......+...+++++++.++++|.+ ++.....
T Consensus 293 ~-----~~~~~~~~~~~~~~g~~~~~~~~--~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~-l~~~~~~- 361 (424)
T 2b9w_A 293 T-----ISGYVPDNMRPERLGHVMVYYHR--WA--DDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMET-FGHPVEK- 361 (424)
T ss_dssp S-----SEEECGGGGSGGGTTSCCEEEEC--CT--TCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHH-TTCCEEE-
T ss_pred c-----ccccccCCCCCcCCCcceEEeee--cC--CCCceEEEEEeccCCCcccccChHHHHHHHHHHHHH-cCCcccc-
Confidence 1 11111110 0011 1111111 00 012223333444444556677889999999999998 4421111
Q ss_pred cccceEEEEEEeecCC-cccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHH
Q 009372 447 QSKAKIVKYHVVKTPR-SVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 515 (536)
Q Consensus 447 ~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll 515 (536)
.+....|...|. +...+..++.. +.....+.+||||||+++.. |+.|+|+.||++||++|+
T Consensus 362 ----~~~~~~w~~~p~~~~~~~~~G~~~-~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 362 ----IIEEQTWYYFPHVSSEDYKAGWYE-KVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp ----EEEEEEEEEEEECCHHHHHTTHHH-HHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred ----cccccceeeeeccCHHHHhccHHH-HHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 111222222221 11111112110 01112345799999998875 789999999999999885
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.94 E-value=1.6e-24 Score=210.93 Aligned_cols=323 Identities=16% Similarity=0.219 Sum_probs=196.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCcc-c
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL-Q 135 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~~-~ 135 (536)
++||+|||||++|+++|+.|++.|.+|+|||++..+||++.+.. ..+..++.|...+....+.+.++++++...... .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe-cCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 36999999999999999999999999999999999999887644 355677777777765555555555543211000 0
Q ss_pred ccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHHHHH
Q 009372 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (536)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (536)
+. ..+. ......
T Consensus 81 ~~------------~~~~-------------------------------------------------~~~~~~------- 92 (336)
T 1yvv_A 81 WT------------PLLY-------------------------------------------------NFHAGR------- 92 (336)
T ss_dssp EC------------CCEE-------------------------------------------------EESSSB-------
T ss_pred cc------------ccce-------------------------------------------------eccCcc-------
Confidence 00 0000 000000
Q ss_pred cCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhhhcCCCeEEEecCCCCccchHHHHHHHHHcCcEEEeCcce
Q 009372 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRV 295 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V 295 (536)
..... .+ ...+... .-...+.+.+.+ |++|+++++|
T Consensus 93 ---------------------~~~~~-----------------~~-~~~~~~~----~~~~~l~~~l~~-g~~i~~~~~v 128 (336)
T 1yvv_A 93 ---------------------LSPSP-----------------DE-QVRWVGK----PGMSAITRAMRG-DMPVSFSCRI 128 (336)
T ss_dssp ---------------------CCCCC-----------------TT-SCEEEES----SCTHHHHHHHHT-TCCEECSCCE
T ss_pred ---------------------cccCC-----------------CC-CccEEcC----ccHHHHHHHHHc-cCcEEecCEE
Confidence 00000 00 0011110 112334444433 7899999999
Q ss_pred EEEEEcCCCCEEEEEEcCCcEEE-cCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEEeeeccccCcccc
Q 009372 296 QKIELNDDGTVKNFLLTNGNVID-GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLK 374 (536)
Q Consensus 296 ~~I~~~~~g~~~~v~~~~g~~i~-ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~ 374 (536)
++|..++++ + .|++.+|+.+. ||.||+|+|+..+.++++.. + .....+..+.|.+..++.+. |+.++|.+.
T Consensus 129 ~~i~~~~~~-~-~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~--~-~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~- 200 (336)
T 1yvv_A 129 TEVFRGEEH-W-NLLDAEGQNHGPFSHVIIATPAPQASTLLAAA--P-KLASVVAGVKMDPTWAVALA--FETPLQTPM- 200 (336)
T ss_dssp EEEEECSSC-E-EEEETTSCEEEEESEEEECSCHHHHGGGGTTC--H-HHHHHHTTCCEEEEEEEEEE--ESSCCSCCC-
T ss_pred EEEEEeCCE-E-EEEeCCCcCccccCEEEEcCCHHHHHHhhccC--H-HHHHHHhhcCccceeEEEEE--ecCCCCCCC-
Confidence 999986555 3 48888887664 99999999999888887542 1 33466788888887777766 666665443
Q ss_pred cccCccccccCCcceeeeccccCcccccCCCccEEEEEEec--chhhccCChHHHHHHHHHHHHHhCCCCcccccccceE
Q 009372 375 NTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI 452 (536)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~ 452 (536)
......+.+ .++.++.+. .+...+.+..++ +...+ ...+..++++++.+.+++.+.++++..... +.
T Consensus 201 ---~~~~~~~~~-~~~l~~~~~-~p~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~-p~---- 269 (336)
T 1yvv_A 201 ---QGCFVQDSP-LDWLARNRS-KPERDDTLDTWI-LHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPA-PV---- 269 (336)
T ss_dssp ---CEEEECSSS-EEEEEEGGG-STTCCCSSEEEE-EEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCC-CS----
T ss_pred ---CeEEeCCCc-eeEEEecCc-CCCCCCCCcEEE-EEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCC-Cc----
Confidence 222233333 333322221 122111112222 22221 245667889999999999999999853211 11
Q ss_pred EEEEEeecCCcccccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHH
Q 009372 453 VKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 519 (536)
Q Consensus 453 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~ 519 (536)
.....+|.++...+..+.. ....+.++|+||||+++. +++++|+.||.++|++|++.+.
T Consensus 270 -~~~~~rw~~a~~~~~~~~~----~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 270 -FSLAHRWLYARPAGAHEWG----ALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp -EEEEEEEEEEEESSCCCCS----CEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTT
T ss_pred -EEEccccCccCCCCCCCCC----eeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHhh
Confidence 1223334444333322211 112345899999999976 6999999999999999998754
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.90 E-value=1.2e-21 Score=197.51 Aligned_cols=258 Identities=14% Similarity=0.108 Sum_probs=150.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCC-Ce---------------eeeceeeecc-
Q 009372 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDG-DW---------------YETGLHIFFG- 116 (536)
Q Consensus 54 ~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g-~~---------------~d~G~~~~~~- 116 (536)
.+.++||||||||++||+||+.|++.|++|+|||+++++||+++++.. +| +. ++.|.++..+
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~-~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l 86 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTL-SQLYEKFKQNPISKEERESKFGKDRDWNVDL 86 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHCSSCCCHHHHHHHHCCGGGCCEES
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceec-cchhceeccCCccccCcchhcccccceeecc
Confidence 345689999999999999999999999999999999999999998542 11 11 3444444332
Q ss_pred ------CcchHHHHHHHhCCCCcccccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHH------H
Q 009372 117 ------AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEK------V 184 (536)
Q Consensus 117 ------~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 184 (536)
....+.++++++|+...+.+...+..+... ++.. +. +|... ...+. .....+.++ .
T Consensus 87 ~P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~--~g~~--~~----~p~~~--~~~~~--~~l~~~~~~~~~~~~~ 154 (453)
T 2bcg_G 87 IPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK--QGKI--YK----VPANE--IEAIS--SPLMGIFEKRRMKKFL 154 (453)
T ss_dssp SCCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE--TTEE--EE----CCSSH--HHHHH--CTTSCHHHHHHHHHHH
T ss_pred ccceeecCcHHHHHHHhcCCccceEEEEccceeEEe--CCeE--EE----CCCCh--HHHHh--hhccchhhHHHHHHHH
Confidence 234688999999987655554443333222 1221 11 11110 00000 011111111 1
Q ss_pred Hhhcccchhhh-cccccccccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCC-CccccHHHHHHHHHHHh---hhcC
Q 009372 185 KFAIGLLPAII-GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFIN-PDELSMQCILIALNRFL---QEKH 259 (536)
Q Consensus 185 ~~~~~~~~~~~-~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~ 259 (536)
........... ... .......++.+|+++.+..+.+.+ ++..... ....+ ....+....+..+..+. ....
T Consensus 155 ~~~~~~~~~~p~~~~--~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~ 230 (453)
T 2bcg_G 155 EWISSYKEDDLSTHQ--GLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMA-LWTNDDYLQQPARPSFERILLYCQSVARYG 230 (453)
T ss_dssp HHHHHCBTTBGGGST--TCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTS-CCSSSGGGGSBHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhccCCchhhh--ccccccCCHHHHHHHhCCCHHHHH-HHHHHHH-hccCccccCCchHHHHHHHHHHHHHHHhhc
Confidence 11100000000 000 002356899999999877766544 3222111 10000 01112222221111111 1112
Q ss_pred CCeEEEecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcC-CCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 260 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 260 g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~-~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+.++.|| ++.++++|++.+++.|++|+++++|++|..+. ++++++|++ +|+++.||.||+|++++.
T Consensus 231 ~~~~~~p~gG-~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 231 KSPYLYPMYG-LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFP 300 (453)
T ss_dssp SCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCG
T ss_pred CCceEeeCCC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccc
Confidence 2456677776 78999999999999999999999999999842 566667777 577899999999999873
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.90 E-value=5.2e-24 Score=211.09 Aligned_cols=255 Identities=15% Similarity=0.150 Sum_probs=160.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCceEEEecCCccCceeeeeccC-CCCee-eeceeeeccCcchHHHHHHHhCCCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~-g~~V~vlE~~~~~GG~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (536)
.++||+|||||++||+||+.|++. |++|+|+|+++++||++.+.... +|..+ +.|++++...++.+.++++++|+-.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~ 85 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT 85 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCBC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh
Confidence 468999999999999999999999 99999999999999999987643 67777 4999999887888999999998732
Q ss_pred cccccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHH-hhcccchhhhcccccccccccccHHH
Q 009372 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK-FAIGLLPAIIGGQAYVEAQDGLTVQE 211 (536)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~ 211 (536)
. +.. ...+.. .++... +|.....+..++... +. .++++ .+...... ....+..++.+
T Consensus 86 ~--~~~-~~~~~~---~G~~~~------~p~~~~~~~~l~~~~--~~-~~~~~~~l~~~~~~-------~~~~~~~s~~e 143 (399)
T 1v0j_A 86 D--YRH-RVFAMH---NGQAYQ------FPMGLGLVSQFFGKY--FT-PEQARQLIAEQAAE-------IDTADAQNLEE 143 (399)
T ss_dssp C--CCC-CEEEEE---TTEEEE------ESSSHHHHHHHHTSC--CC-HHHHHHHHHHHGGG-------SCTTC----CC
T ss_pred c--ccc-ceEEEE---CCEEEe------CCCCHHHHHHHhccc--CC-HHHHHHHHHHHhhc-------cCCCCcccHHH
Confidence 1 111 111111 122111 122222233333221 11 12221 11111110 01234578999
Q ss_pred HHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHh--hhcCC-CeE-EEecCCCCccchHHHHHHHHHcCc
Q 009372 212 WMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL--QEKHG-SKM-AFLDGNPPERLCLPIVEHIQSLGG 287 (536)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g-~~~-~~~~gg~~~~l~~~l~~~l~~~G~ 287 (536)
|+.+. +...+.+.++.++....++.+++++++..... +.... ...+. ..+ .++.|| +..+++.|++ +.|+
T Consensus 144 ~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~-~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~ 217 (399)
T 1v0j_A 144 KAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANITR-LPVRYTFDNRYFSDTYEGLPTDG-YTAWLQNMAA---DHRI 217 (399)
T ss_dssp HHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSC-CCCCSSSCCCSCCCSEEECBTTH-HHHHHHHHTC---STTE
T ss_pred HHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhhc-ceeEeccccchhhhhhccccccc-HHHHHHHHHh---cCCe
Confidence 99885 77788888899998888889999988754310 00000 01111 123 255655 6666666665 3578
Q ss_pred EEEeCcceEEEEEcCCCCEEEEEEcCCcEE-EcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEE
Q 009372 288 EVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIW 362 (536)
Q Consensus 288 ~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i-~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~ 362 (536)
+|++|++|++|... | + ++ .||+||+|+|+..+.++. +..++|.+...+.+.
T Consensus 218 ~I~l~~~V~~I~~~-------v---~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~ 269 (399)
T 1v0j_A 218 EVRLNTDWFDVRGQ-------L---R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEV 269 (399)
T ss_dssp EEECSCCHHHHHHH-------H---T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEE
T ss_pred EEEECCchhhhhhh-------h---h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEE
Confidence 99999999999641 2 1 35 799999999999877652 335667666666665
No 28
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.89 E-value=9.5e-22 Score=195.43 Aligned_cols=264 Identities=15% Similarity=0.085 Sum_probs=179.7
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeecc-------------------CCCCeeeeceee
Q 009372 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD-------------------GDGDWYETGLHI 113 (536)
Q Consensus 53 ~~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~-------------------~~g~~~d~G~~~ 113 (536)
..+..+||+|||+|++|+++|+.|++.|++|+|+|+++..||++.++.. ..++.+|+++++
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~ 95 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKF 95 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCB
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeE
Confidence 3456789999999999999999999999999999999999999987641 124688999887
Q ss_pred eccCcchHHHHHHHhCCCCcccccccceeeeccCC-------CCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHh
Q 009372 114 FFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNK-------PGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKF 186 (536)
Q Consensus 114 ~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (536)
+. ....+.+++.+.|+...+.|......+..... .++.. . +|.. ...++. ...+.+.++.+.
T Consensus 96 l~-~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~--~----VPss---~~e~~~-~~lLs~~eK~~l 164 (475)
T 3p1w_A 96 IL-VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIH--K----VPAT---DMEALV-SPLLSLMEKNRC 164 (475)
T ss_dssp EE-TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEE--E----CCCS---HHHHHT-CTTSCHHHHHHH
T ss_pred ee-cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceE--e----CCCC---HHHHhh-ccCCCHHHHHHH
Confidence 75 44578899999999998888887766544211 11111 1 2322 233343 356677777655
Q ss_pred hcccchhhhccc--c-cc--cccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHh---hhc
Q 009372 187 AIGLLPAIIGGQ--A-YV--EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL---QEK 258 (536)
Q Consensus 187 ~~~~~~~~~~~~--~-~~--~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 258 (536)
.+.+........ + .. .+.+..++.+|++++++.+.+.+.++..+.... ..+....++...+..+..+. ...
T Consensus 165 ~kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~-~~~~~~~~a~~~l~ri~~y~~Sl~~y 243 (475)
T 3p1w_A 165 KNFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYL-NDDYLKQPAYLTLERIKLYMQSISAF 243 (475)
T ss_dssp HHHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGGGGSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhc-CCCcccCCHHHHHHHHHHHHHHHhhc
Confidence 433322111110 0 11 123568999999999998877654322221111 11222345544444333332 112
Q ss_pred CCCeEEEecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 259 HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 259 ~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
.++...|+.|| +..++++|.+.+++.|++|+++++|++|..++++++++|++.+|+++.||+||+|++..
T Consensus 244 g~s~~~yp~gG-~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 244 GKSPFIYPLYG-LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SSCSEEEETTC-TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred CCCceEEECCC-HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 34567889988 79999999999999999999999999999855778889999999889999999998764
No 29
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.88 E-value=1.5e-22 Score=199.30 Aligned_cols=250 Identities=17% Similarity=0.177 Sum_probs=161.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccC-CCCee-eeceeeeccCcchHHHHHHHhCCCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGINDRL 134 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~~~ 134 (536)
++||+|||||++||++|+.|++.|++|+|+|+++++||++.+.... .|..+ +.|+|++...++.+.+++++++....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~- 81 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMMP- 81 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhcc-
Confidence 4799999999999999999999999999999999999999886632 57765 89999999888889999999885211
Q ss_pred cccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHHHH
Q 009372 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (536)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (536)
+.. ...... ++.... +|.....+..++... +...+..+.+..... .. ..+..++.+|+.
T Consensus 82 -~~~-~~~~~~---~g~~~~------~P~~~~~~~~l~~~~--~~~~~~~~~l~~~~~------~~--~~~~~sl~e~~~ 140 (384)
T 2bi7_A 82 -YVN-RVKATV---NGQVFS------LPINLHTINQFFSKT--CSPDEARALIAEKGD------ST--IADPQTFEEEAL 140 (384)
T ss_dssp -CCC-CEEEEE---TTEEEE------ESCCHHHHHHHTTCC--CCHHHHHHHHHHHSC------CS--CSSCCBHHHHHH
T ss_pred -ccc-ceEEEE---CCEEEE------CCCChhHHHHHhccc--CCHHHHHHHHHHhhh------cc--CCCCcCHHHHHH
Confidence 111 111111 111111 222222333332211 111111111111111 00 235689999998
Q ss_pred HcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH-hhhc-CCCeEE-EecCCCCccchHHHHHHHHHcCcEEEe
Q 009372 215 KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQEK-HGSKMA-FLDGNPPERLCLPIVEHIQSLGGEVRL 291 (536)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~g~~~~-~~~gg~~~~l~~~l~~~l~~~G~~i~~ 291 (536)
+. +...+.+.++.++....++.+++++++.........+ .... ....+. ++.|| +..+++.|++ +.|++|++
T Consensus 141 ~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~I~l 215 (384)
T 2bi7_A 141 RF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCG-YTQMIKSILN---HENIKVDL 215 (384)
T ss_dssp HH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTH-HHHHHHHHHC---STTEEEEE
T ss_pred Hh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcC-HHHHHHHHHh---cCCCEEEE
Confidence 87 7788889999999999999999999876431000000 0111 112333 66666 6677666665 35789999
Q ss_pred CcceE-EEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEE
Q 009372 292 NSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIW 362 (536)
Q Consensus 292 ~~~V~-~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~ 362 (536)
|++|+ +|.. .+|+||+|+|+..+.+++ +..++|.+...+.+.
T Consensus 216 ~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~ 258 (384)
T 2bi7_A 216 QREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFT 258 (384)
T ss_dssp SCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEE
T ss_pred CCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEE
Confidence 99999 7842 299999999999877652 334567676655555
No 30
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.87 E-value=4.4e-20 Score=184.92 Aligned_cols=258 Identities=14% Similarity=0.114 Sum_probs=158.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeec-c------C-------------CCCeeeeceeee
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWK-D------G-------------DGDWYETGLHIF 114 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~-~------~-------------~g~~~d~G~~~~ 114 (536)
+.++||+|||||++||++|+.|++.|++|+|+|+++.+||++.++. . . .++.+|.|++++
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l 83 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFL 83 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCccee
Confidence 4568999999999999999999999999999999999999998875 1 0 347788888877
Q ss_pred ccCcchHHHHHHHhCCCCcccccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHH---Hhhcccc
Q 009372 115 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKV---KFAIGLL 191 (536)
Q Consensus 115 ~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 191 (536)
... ..+.++++++|+...+.+...+..+... +++. +. +|... ...+. .....+.++. +....+.
T Consensus 84 ~~~-~~l~~ll~~lgl~~~l~~~~~~~~~~~~--~g~~--~~----~p~~~---~~~~~-~~l~~~~~~~~~~~~~~~~~ 150 (433)
T 1d5t_A 84 MAN-GQLVKMLLYTEVTRYLDFKVVEGSFVYK--GGKI--YK----VPSTE---TEALA-SNLMGMFEKRRFRKFLVFVA 150 (433)
T ss_dssp ETT-SHHHHHHHHHTGGGGCCEEECCEEEEEE--TTEE--EE----CCCSH---HHHHH-CSSSCHHHHHHHHHHHHHHH
T ss_pred ecc-chHHHHHHHcCCccceEEEEeCceEEee--CCEE--EE----CCCCH---HHHhh-CcccChhhHHHHHHHHHHHH
Confidence 643 3678899999987655554443333221 2221 11 11110 00000 0111111110 0000000
Q ss_pred hhhhcccc---cccccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhh--hcCC-CeEEE
Q 009372 192 PAIIGGQA---YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKHG-SKMAF 265 (536)
Q Consensus 192 ~~~~~~~~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g-~~~~~ 265 (536)
. .....+ ........++.+|+++.+..+.+.. ++........+.++.+.+....+..+..+.. ..+| ..+.+
T Consensus 151 ~-~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~ 228 (433)
T 1d5t_A 151 N-FDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLY 228 (433)
T ss_dssp H-CCTTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEE
T ss_pred h-hcccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 0 000000 0012356899999999877665543 3322211112223334444333222222222 1122 34667
Q ss_pred ecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 266 LDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 266 ~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+.|| ++.++++|.+.+++.|++|+++++|++|..+ ++++++|++ +|+++.||+||+|++++.
T Consensus 229 p~gG-~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 229 PLYG-LGELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYVP 290 (433)
T ss_dssp ETTC-TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGCG
T ss_pred eCcC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCCc
Confidence 7777 8999999999999999999999999999974 566665664 777899999999999874
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.86 E-value=6e-22 Score=193.87 Aligned_cols=251 Identities=17% Similarity=0.157 Sum_probs=160.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeee-eceeeeccCcchHHHHHHHhCCCCccc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYE-TGLHIFFGAYPNIQNLFGELGINDRLQ 135 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d-~G~~~~~~~~~~~~~l~~~lg~~~~~~ 135 (536)
++||+|||||++||+||+.|++.|++|+|+|+++++||++.+.. ..|..++ .|++++...++.+.+++++++....
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~-- 77 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNR-- 77 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCHHHHHHHHTTSCBCC--
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCHHHHHHHHHhhhhhh--
Confidence 36999999999999999999999999999999999999998865 3677785 8999998777788888988875321
Q ss_pred ccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHHHHH
Q 009372 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (536)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (536)
+..... ... .+... . +|.....+..++... ...+..+........ ....+..++.+|+.+
T Consensus 78 ~~~~~~-~~~---~g~~~--~----~p~~~~~~~~l~~~~---~~~~~~~~l~~~~~~-------~~~~~~~s~~~~~~~ 137 (367)
T 1i8t_A 78 FTNSPL-AIY---KDKLF--N----LPFNMNTFHQMWGVK---DPQEAQNIINAQKKK-------YGDKVPENLEEQAIS 137 (367)
T ss_dssp CCCCCE-EEE---TTEEE--E----SSBSHHHHHHHHCCC---CHHHHHHHHHHHTTT-------TCCCCCCSHHHHHHH
T ss_pred ccccce-EEE---CCeEE--E----cCCCHHHHHHHhccC---CHHHHHHHHHHHhhc-------cCCCCCccHHHHHHH
Confidence 111111 111 11111 1 233333343333221 111111111111110 112356899999998
Q ss_pred cCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHH-hhhcC-CCeEE-EecCCCCccchHHHHHHHHHcCcEEEeC
Q 009372 216 QGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQEKH-GSKMA-FLDGNPPERLCLPIVEHIQSLGGEVRLN 292 (536)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-g~~~~-~~~gg~~~~l~~~l~~~l~~~G~~i~~~ 292 (536)
. +...+.+.++.++....++.+++++++.......... ....+ ...+. ++.|| +..+++.|++ |++|++|
T Consensus 138 ~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~-----g~~i~l~ 210 (367)
T 1i8t_A 138 L-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGG-YTKLIEKMLE-----GVDVKLG 210 (367)
T ss_dssp H-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTC-HHHHHHHHHT-----TSEEECS
T ss_pred H-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCC-HHHHHHHHhc-----CCEEEeC
Confidence 7 7778888899999999999999999875431000000 00111 12232 66666 5666666654 6899999
Q ss_pred cceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEE
Q 009372 293 SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIW 362 (536)
Q Consensus 293 ~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~ 362 (536)
++|++|.. . | ++.+|+||+|+|+..+.++ .+..++|.+...+.+.
T Consensus 211 ~~V~~i~~---~----v------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~ 255 (367)
T 1i8t_A 211 IDFLKDKD---S----L------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETER 255 (367)
T ss_dssp CCGGGSHH---H----H------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEE
T ss_pred Cceeeech---h----h------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEE
Confidence 99998852 1 1 2469999999999876543 1345667776666665
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.82 E-value=1.4e-19 Score=176.54 Aligned_cols=253 Identities=19% Similarity=0.227 Sum_probs=163.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCee-eeceeeeccCcchHHHHHHHhCCCC
Q 009372 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (536)
Q Consensus 54 ~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~-d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (536)
.+..+||+|||||++||+||+.|++.|.+|+|+|+++++||++.+.....|..+ +.|+|++....+.+.+++++++...
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 105 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWR 105 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEE
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhcc
Confidence 346789999999999999999999999999999999999999988654567765 9999999988888999999998432
Q ss_pred cccccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhcccccccccccccHHHH
Q 009372 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (536)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (536)
. +. ....... ++++.. +|.....+..++.. .+........+. . ......+..++++|
T Consensus 106 ~--~~-~~~~~~~---~g~l~~------lP~~~~~~~~l~~~--~~~~~~~~~~l~----~-----~~~~~~~~~s~~e~ 162 (397)
T 3hdq_A 106 P--YQ-HRVLASV---DGQLLP------IPINLDTVNRLYGL--NLTSFQVEEFFA----S-----VAEKVEQVRTSEDV 162 (397)
T ss_dssp E--CC-CBEEEEE---TTEEEE------ESCCHHHHHHHHTC--CCCHHHHHHHHH----H-----HCCCCSSCCBHHHH
T ss_pred c--cc-ccceEEE---CCEEEE------cCCChHHHHHhhcc--CCCHHHHHHHHh----h-----cccCCCCCcCHHHH
Confidence 1 11 1111111 122211 23333333333321 111111111111 0 01123456899999
Q ss_pred HHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhh--hcC-CCeE-EEecCCCCccchHHHHHHHHHcCcE
Q 009372 213 MRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKH-GSKM-AFLDGNPPERLCLPIVEHIQSLGGE 288 (536)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-g~~~-~~~~gg~~~~l~~~l~~~l~~~G~~ 288 (536)
+.+. +...+.+.++.++..+.|+.+++++++.... .+..... ..+ .... .++.+| ...+++.|++ ..|++
T Consensus 163 ~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gG-y~~l~e~l~~---~~g~~ 236 (397)
T 3hdq_A 163 VVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHG-YTRMFQNMLS---SPNIK 236 (397)
T ss_dssp HHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTC-HHHHHHHHTC---STTEE
T ss_pred HHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCC-HHHHHHHHHh---ccCCE
Confidence 9876 6778889999999999999999999976432 1100000 000 1122 356666 5566555543 45899
Q ss_pred EEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEE
Q 009372 289 VRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIW 362 (536)
Q Consensus 289 i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~ 362 (536)
|++|++|+++ +.++.+|+||+|+|...+-.. .+..+.+.+...+.+.
T Consensus 237 V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~ 283 (397)
T 3hdq_A 237 VMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHET 283 (397)
T ss_dssp EEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEE
T ss_pred EEECCeEEec---------------cccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEE
Confidence 9999999732 334679999999999776321 2345567676666665
No 33
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.74 E-value=1.9e-14 Score=147.11 Aligned_cols=186 Identities=18% Similarity=0.200 Sum_probs=112.5
Q ss_pred HHHHHHHhCCCCcccccccceeeeccCCCCccccccCCCCCCcchhHHHHHHhcCCCCChhHHHHhhcccchhhhccc--
Q 009372 121 IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQ-- 198 (536)
Q Consensus 121 ~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (536)
+.+++.++|+...+.|......+...+ +.+. .+|.. ...++.. ..+.+.++.+..+.+... ....
T Consensus 239 lv~LL~~sgV~~yLEFk~v~~~y~~~~--G~~~------~VPas---~~eif~s-~~Lsl~EKr~L~kFl~~~-~~~~~~ 305 (650)
T 1vg0_A 239 LIDLLIKSNVSRYAEFKNITRILAFRE--GTVE------QVPCS---RADVFNS-KQLTMVEKRMLMKFLTFC-VEYEEH 305 (650)
T ss_dssp HHHHHHHHTGGGGCCEEECCEEEEESS--SSEE------ECCCS---HHHHHHC-SSSCHHHHHHHHHHHHHH-HTGGGC
T ss_pred HHHHHHHcCCcceeeEEEccceEEecC--CCEe------ECCCC---HHHHHhC-cCCCHHHHHHHHHHHHHH-HHhccC
Confidence 567777777776666665555444422 2211 13332 2334443 566666665443322111 1111
Q ss_pred -ccccccccccHHHHHHHcCCChHHHHHHHHHHHhhcCCCCCccccHHHHHHHHHHHhh--hcCC-CeEEEecCCCCccc
Q 009372 199 -AYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKHG-SKMAFLDGNPPERL 274 (536)
Q Consensus 199 -~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g-~~~~~~~gg~~~~l 274 (536)
..+...+..++.+|+++++..+.+...+.. .. ... .....+....+..+..++. ..+| ..+.|+.|| ++.|
T Consensus 306 p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~-~l-al~--~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG-~g~L 380 (650)
T 1vg0_A 306 PDEYRAYEGTTFSEYLKTQKLTPNLQYFVLH-SI-AMT--SETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYG-QGEL 380 (650)
T ss_dssp HHHHHTTTTSBHHHHHTTSSSCHHHHHHHHH-HT-TC----CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTC-TTHH
T ss_pred hHHHhhhccCCHHHHHHHhCCCHHHHHHHHH-HH-hcc--CCCCCchhHHHHHHHHHHHHHHhhccCceEEeCCc-hhHH
Confidence 112245678999999998777765443332 11 111 1222344443322222221 2233 367788887 8999
Q ss_pred hHHHHHHHHHcCcEEEeCcceEEEEEcCC-CCEEEEEEcCCcEEEcCEEEE
Q 009372 275 CLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVF 324 (536)
Q Consensus 275 ~~~l~~~l~~~G~~i~~~~~V~~I~~~~~-g~~~~v~~~~g~~i~ad~VI~ 324 (536)
+++|.+.+...|++|+++++|++|..+++ |++++|++.+|++++||.||+
T Consensus 381 ~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs 431 (650)
T 1vg0_A 381 PQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFII 431 (650)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEE
Confidence 99999999999999999999999998543 788888888899999999998
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.74 E-value=1.6e-17 Score=160.57 Aligned_cols=81 Identities=33% Similarity=0.602 Sum_probs=71.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC-CccCceeeeecc---------CCCCeeeeceeeeccCcchHHH
Q 009372 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR-DVLGGKIAAWKD---------GDGDWYETGLHIFFGAYPNIQN 123 (536)
Q Consensus 54 ~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~-~~~GG~~~~~~~---------~~g~~~d~G~~~~~~~~~~~~~ 123 (536)
.+..+||+|||||++||+||+.|++.|++|+|+|++ +++||++.+... ..+..++.|++++...++.+.+
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~ 120 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLA 120 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHH
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHH
Confidence 346789999999999999999999999999999999 999999988653 2578999999999888888999
Q ss_pred HHHHhCCCCcc
Q 009372 124 LFGELGINDRL 134 (536)
Q Consensus 124 l~~~lg~~~~~ 134 (536)
+++++|+....
T Consensus 121 ~~~~lGl~~~~ 131 (376)
T 2e1m_A 121 LIDKLGLKRRL 131 (376)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCCcce
Confidence 99999997653
No 35
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.71 E-value=3.7e-15 Score=141.59 Aligned_cols=67 Identities=27% Similarity=0.462 Sum_probs=55.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHH
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNL 124 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l 124 (536)
++||+|||||+|||+||+.|++.|++|+|||+++.+||++.+.. ..+..+|.|++.+......+...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~ 68 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRFATA 68 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCccccccCcHHHHHH
Confidence 36999999999999999999999999999999999999987754 46778898988776544444333
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.67 E-value=9.4e-15 Score=147.17 Aligned_cols=64 Identities=13% Similarity=0.195 Sum_probs=55.9
Q ss_pred CccchHHHHHHHHHcCcEEEeCc---ceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~---~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~ 336 (536)
+..++..|.+.++++|++|++++ +|++|..+ ++.+++|++.+|++++||.||+|+|.+. ..|++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s-~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA-GQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG-GGTSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh-hhhcC
Confidence 56789999999999999999999 99999984 5567779999998899999999999997 56654
No 37
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.65 E-value=9.9e-15 Score=145.49 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=50.5
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+..++..|.+.+++.|++|+++++|++|..+ ++.++.|++.+| ++.||.||+|+|.+.
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 4578899999999999999999999999984 555667888888 799999999999875
No 38
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.63 E-value=2e-15 Score=148.55 Aligned_cols=59 Identities=10% Similarity=0.138 Sum_probs=50.8
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCC--cEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g--~~i~ad~VI~a~~~~~ 330 (536)
+..++..|.+.++++|++|+++++|++|..++++.+ .|++.+| .+++||.||+|+|.+.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 568899999999999999999999999998655534 4788887 4899999999999986
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.62 E-value=7e-14 Score=138.15 Aligned_cols=58 Identities=16% Similarity=0.176 Sum_probs=50.7
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+..++..|.+.++++|++|+++++|++|..+ ++.+.+|++.+| +++||.||+|+|.+.
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhH
Confidence 5688899999999999999999999999984 455666888777 899999999999986
No 40
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.60 E-value=5.4e-13 Score=141.38 Aligned_cols=62 Identities=18% Similarity=0.155 Sum_probs=52.9
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcC
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 335 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll 335 (536)
+..++..|.+.+++.|++|+++++|++|..++++ +.|++.+|+++.||.||+|+|.+. ..+.
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~i~Ad~VVlAtG~~s-~~l~ 477 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC--WLLNFAGDQQATHSVVVLANGHQI-SRFS 477 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCGGGG-GCST
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe--EEEEECCCCEEECCEEEECCCcch-hccc
Confidence 5688999999999999999999999999985444 368888877899999999999985 4444
No 41
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.59 E-value=1.6e-13 Score=135.59 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=48.7
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+..+...|.+.+++.|++|+++++|++|..+ ++.+ .|++.+| ++.||.||+|+|.+.
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhH
Confidence 4678899999999999999999999999874 4444 6888777 899999999999975
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.58 E-value=6.2e-13 Score=141.03 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=52.0
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc-EEEcCEEEEccCHHHHhhcC
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDILKLQL 335 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~-~i~ad~VI~a~~~~~l~~ll 335 (536)
+..++..|.+.+++.|++|+++++|++|..++++ +.|++.+|+ ++.||.||+|+|.+. ..+.
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s-~~l~ 473 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRL-PEWE 473 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGT-TCST
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcch-hccc
Confidence 5689999999999999999999999999986554 358888886 799999999999985 4444
No 43
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.56 E-value=2e-13 Score=135.60 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=48.0
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+..++..|.+.+.+.|++|+++++|++|..++++ + .|++.+| +++||.||+|+|.+.
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v-~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDADG-V-SVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-E-EEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-E-EEEECCC-EEEcCEEEEcCCcCh
Confidence 4678889999999999999999999999975443 3 4777666 799999999999985
No 44
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.54 E-value=8.5e-13 Score=134.17 Aligned_cols=58 Identities=28% Similarity=0.480 Sum_probs=50.7
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++.+|+++.||.||+|+|.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 467778889999999999999999999984 5567779999998999999999999865
No 45
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.53 E-value=1.5e-12 Score=128.91 Aligned_cols=62 Identities=19% Similarity=0.227 Sum_probs=51.2
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~ 336 (536)
+..++..|.+.++++|++|+++++|++|..++++ + .|++.+| +++||.||+|+|.+. ..+++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~-~~l~~ 210 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWN-SKLLS 210 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGH-HHHGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccH-HHHhh
Confidence 4688899999999999999999999999985444 3 4777666 799999999999986 44543
No 46
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.53 E-value=1.3e-14 Score=143.36 Aligned_cols=57 Identities=18% Similarity=0.084 Sum_probs=50.4
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+..++..|.+.++++|++|+++++|++|..++++ +.|++.+| +++||+||+|+|.+.
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~--~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA--WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE--EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe--EEEEeCCC-EEEcCEEEECCChhH
Confidence 5789999999999999999999999999985443 46888887 899999999999986
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.47 E-value=5.9e-14 Score=141.71 Aligned_cols=63 Identities=22% Similarity=0.247 Sum_probs=52.1
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEc--------------CCCCEEEEEEcCCcEE--EcCEEEEccCHHHHhhc
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDILKLQ 334 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~--------------~~g~~~~v~~~~g~~i--~ad~VI~a~~~~~l~~l 334 (536)
+..++..|.+.++++|++|+++++|++|..+ +++.+++|++.+| ++ .||.||+|+|.+. ..|
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s-~~l 257 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS-NRL 257 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH-HHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH-HHH
Confidence 5688999999999999999999999999872 2445567888888 68 9999999999986 444
Q ss_pred C
Q 009372 335 L 335 (536)
Q Consensus 335 l 335 (536)
+
T Consensus 258 ~ 258 (448)
T 3axb_A 258 L 258 (448)
T ss_dssp H
T ss_pred H
Confidence 3
No 48
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.47 E-value=1.9e-12 Score=133.49 Aligned_cols=59 Identities=19% Similarity=0.188 Sum_probs=50.4
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcC---C--cEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~---g--~~i~ad~VI~a~~~~~ 330 (536)
+..++..|.+.+.++|++|+++++|++|..+ ++.+++|++.+ | .+++||.||+|+|+|+
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 5688999999999999999999999999984 56666777764 3 4799999999999986
No 49
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.46 E-value=3.9e-12 Score=126.19 Aligned_cols=39 Identities=33% Similarity=0.616 Sum_probs=35.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCce
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~ 95 (536)
+|||+|||||++||++|+.|++.|++|+|+|+++.+|..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 589999999999999999999999999999998876543
No 50
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.44 E-value=2e-11 Score=125.82 Aligned_cols=64 Identities=17% Similarity=0.228 Sum_probs=48.7
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCC--EEEEEEcCC---cEEEcCEEEEccCHH-HHhhcC
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT--VKNFLLTNG---NVIDGDAYVFATPVD-ILKLQL 335 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~--~~~v~~~~g---~~i~ad~VI~a~~~~-~l~~ll 335 (536)
..+...|.+.+.+.|++|+++++|++|+.++++. .+.+++.++ .+++||.||.|.|.+ .+++.+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 3566778888888899999999999999865510 234666665 689999999999885 345555
No 51
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.44 E-value=7.1e-13 Score=130.40 Aligned_cols=62 Identities=21% Similarity=0.242 Sum_probs=52.3
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 336 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~ 336 (536)
+..++..|.+.+++.|++|+++++|++|..++++ + .|++.+| ++.||.||+|+|.+. ..+++
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~g-~~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-V-TIETADG-EYQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSC-EEEEEEEEECCGGGG-GGTST
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-E-EEEECCC-eEEcCEEEEcCCccH-Hhhcc
Confidence 5688999999999999999999999999985444 3 5788888 699999999999987 56655
No 52
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.43 E-value=1.5e-12 Score=133.16 Aligned_cols=58 Identities=26% Similarity=0.323 Sum_probs=49.2
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc---EEEcC-EEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGD-AYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~---~i~ad-~VI~a~~~~~ 330 (536)
.++..|.+.+++.|++|+++++|++|..++++++++|.+.++. +|+|| .||+|+|.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 7889999999999999999999999998657888888776442 58996 9999998754
No 53
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.43 E-value=5.2e-13 Score=134.29 Aligned_cols=59 Identities=24% Similarity=0.443 Sum_probs=50.6
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++.+|++++||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 3577888999999999999999999999874 5555678888887799999999998765
No 54
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.42 E-value=1.4e-11 Score=122.15 Aligned_cols=58 Identities=10% Similarity=0.108 Sum_probs=46.2
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc---CCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~---~g~~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+.+.|++|+++++|++|..+ ++.+.+|++. ++.+++||.||.|+|.+.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 356677888888889999999999999985 5556556663 455899999999998763
No 55
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.42 E-value=5.4e-11 Score=122.91 Aligned_cols=62 Identities=6% Similarity=0.019 Sum_probs=50.3
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc---CCc--EEEcCEEEEccCHHHHhhc
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDILKLQ 334 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~---~g~--~i~ad~VI~a~~~~~l~~l 334 (536)
+..++..+.+.+.++|++|+++++|++|..+ ++.+++|++. +|+ +++||.||+|+|+|+ ..+
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws-~~l 253 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV-DKV 253 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH-HHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH-HHH
Confidence 5678889999999999999999999999984 4556667653 343 699999999999986 444
No 56
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.42 E-value=1.8e-12 Score=129.10 Aligned_cols=54 Identities=22% Similarity=0.339 Sum_probs=43.6
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
..|...|.+.+.+ ++|+++++|++|+.++++ +.|++.+|++++||.||.|.|.+
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECCCcC
Confidence 3455667777665 889999999999986544 35888999899999999999985
No 57
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.40 E-value=2.8e-11 Score=121.06 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=51.8
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc--EEEcCEEEEccCHH-HHhhcCC
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVD-ILKLQLP 336 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~--~i~ad~VI~a~~~~-~l~~ll~ 336 (536)
..+...|.+.+.+.|++|+++++|++|..++++..+.|.+.+|+ +++||.||.|+|.+ .+++++.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 45667788888888999999999999998666655567778887 69999999999986 3444443
No 58
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.39 E-value=9.6e-12 Score=129.05 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=49.3
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc--CCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~--~g~--~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+.+.|++|+++++|++|..++++++++|++. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 57888899999999999999999999998544777777665 575 689999999998753
No 59
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.39 E-value=4.2e-11 Score=123.66 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc-CC--cEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~-~g--~~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+++.|++++++++|++|..+ ++..+.|++. +| .+++||.||.|+|.+.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 456677888888899999999999999874 4445567776 66 5799999999999864
No 60
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.38 E-value=3.3e-12 Score=132.35 Aligned_cols=59 Identities=27% Similarity=0.295 Sum_probs=49.0
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc--CCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~--~g~--~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||+|+|.+.
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 46788899999999999999999999998543777777765 675 689999999998754
No 61
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.37 E-value=1.4e-12 Score=129.10 Aligned_cols=57 Identities=16% Similarity=0.303 Sum_probs=48.6
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+.+.|.+.+++.|++|+++++|++|..++++ +.|.+.+| +++||.||+|+|.+.
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECCCCcc
Confidence 4578888999999999999999999999875444 45888888 899999999999865
No 62
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.36 E-value=1.6e-12 Score=140.87 Aligned_cols=58 Identities=24% Similarity=0.237 Sum_probs=51.1
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+..++..|.+.+.++|++|+++++|++|..+ ++.++.|++.+| +++||.||+|+|.+.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 5689999999999999999999999999974 455667888877 799999999999986
No 63
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.32 E-value=8.1e-11 Score=121.34 Aligned_cols=62 Identities=13% Similarity=0.141 Sum_probs=48.1
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEE--cCC-cEEEcCEEEEccCHH-HHhhcCC
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NVIDGDAYVFATPVD-ILKLQLP 336 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~--~~g-~~i~ad~VI~a~~~~-~l~~ll~ 336 (536)
.+...|.+.+.+.|++|+++++|++|+.++++.. |++ .+| ++++||.||.|.|.+ .+++.+.
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~--v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE--VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE--EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE--EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 4566678888888999999999999998655533 555 677 689999999999885 4555553
No 64
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.31 E-value=2.1e-10 Score=117.03 Aligned_cols=58 Identities=21% Similarity=0.174 Sum_probs=49.6
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc---CCc--EEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~---~g~--~i~ad~VI~a~~~~~ 330 (536)
+..++..|.+.+.++|++|+++++|++|..++ .+++|++. +|+ +++||.||+|+|+++
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 67899999999999999999999999999743 45567773 565 799999999999986
No 65
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.30 E-value=3.2e-10 Score=117.44 Aligned_cols=59 Identities=24% Similarity=0.289 Sum_probs=48.7
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcC------C---------cEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------G---------NVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~------g---------~~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+++.|++|++++.|++|..++++.+++|++.+ | .+++||.||.|.|.+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 356677888888889999999999999986667777787753 3 5899999999999863
No 66
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.29 E-value=1.2e-10 Score=113.95 Aligned_cols=40 Identities=30% Similarity=0.325 Sum_probs=36.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
..++||+|||||++|+++|++|+++|.+|+|||++...+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 3568999999999999999999999999999999876554
No 67
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.27 E-value=2e-12 Score=125.94 Aligned_cols=189 Identities=12% Similarity=0.028 Sum_probs=100.6
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhc
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 350 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~ 350 (536)
+..++..|.+.++++|++|+. ++|++|...+ .++||.||+|+|.+. ..+++..
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------~~~a~~VV~A~G~~s-~~l~~~~------------ 193 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-------------REGADVIVNCTGVWA-GALQRDP------------ 193 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------HTTCSEEEECCGGGG-GGTSCCT------------
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------cCCCCEEEECCCcCh-HhhcCCC------------
Confidence 678999999999999999998 8998885421 267999999999998 5665431
Q ss_pred cCCccEEEEEEEeeeccccCcccccccCccccccC----CcceeeeccccCcccccCCCccEEEEEEecchhhccCChHH
Q 009372 351 LVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSRS----SLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSE 426 (536)
Q Consensus 351 ~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee 426 (536)
+..+.-...+. ++.+. . ...++..+ .-...|..+ .++..++... .....+....+++
T Consensus 194 -~l~p~rg~~~~--~~~~~---~----~~~~~~~~~~~~~~~~~y~~p--------~~~~~~iGg~-~~~~~~~~~~~~~ 254 (351)
T 3g3e_A 194 -LLQPGRGQIMK--VDAPW---M----KHFILTHDPERGIYNSPYIIP--------GTQTVTLGGI-FQLGNWSELNNIQ 254 (351)
T ss_dssp -TCEEEEEEEEE--EECTT---C----CSEEEECCTTTCTTCSCEEEE--------CSSCEEEECC-CEETCCCCSCCHH
T ss_pred -ceeecCCcEEE--EeCCC---c----ceEEEeccccCCCCceeEEEe--------CCCcEEEeee-eecCCCCCCCCHH
Confidence 11222222222 22110 1 11111100 000112111 1122222211 1112333334667
Q ss_pred HHHHHHHHHHHhCCCCcccccccceEEEEEEeecCCcccccCCCCCCC-CC-CCCCC-CCCeEEecccccCCCCCchhHH
Q 009372 427 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC-RP-LQRSP-VEGFYLAGDYTKQKYLASMEGA 503 (536)
Q Consensus 427 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~-~~~~p-~~~l~~aG~~~~~~~~~~i~gA 503 (536)
..+.+++.+.+++|..... .+. ..|. ++....+. .+. .+ .-..| .+|||++.-+.. .++--|
T Consensus 255 ~~~~l~~~~~~~~P~l~~~-----~i~-~~w~----G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g----~G~~~a 319 (351)
T 3g3e_A 255 DHNTIWEGCCRLEPTLKNA-----RII-GERT----GFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGG----YGLTIH 319 (351)
T ss_dssp HHHHHHHHHHHHCGGGGGC-----EEE-EEEE----EEEEECSS-CEEEEEEECCSSSCEEEEEEECCTT----CHHHHH
T ss_pred HHHHHHHHHHHhCCCccCC-----cEe-eeeE----eeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCc----chHhhh
Confidence 7889999999999863211 122 2221 11111111 000 00 00122 568887764433 368888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009372 504 VLSGKLCAQAIVQDYVL 520 (536)
Q Consensus 504 ~~SG~~aA~~ll~~l~~ 520 (536)
...|+.+|+.|...++.
T Consensus 320 p~~g~~la~li~~~~~~ 336 (351)
T 3g3e_A 320 WGCALEAAKLFGRILEE 336 (351)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88999999999988765
No 68
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.24 E-value=2.9e-12 Score=110.74 Aligned_cols=104 Identities=20% Similarity=0.153 Sum_probs=75.3
Q ss_pred chhhccCChHHHHHHHHHHHHHhCCCCcccccccceE--EEEEEeecCCc--cccc-CCCC-CCCCCCCCCCCCCeEEec
Q 009372 416 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI--VKYHVVKTPRS--VYKT-IPNC-EPCRPLQRSPVEGFYLAG 489 (536)
Q Consensus 416 ~~~~~~~~~ee~~~~~~~~L~~~~~~~~~~~~~~~~~--~~~~~~~~p~~--~~~~-~~~~-~~~~~~~~~p~~~l~~aG 489 (536)
+..|..++++++++.++++|.++|+... . . ...+ ...+|...|++ .|.+ .++. ..+.+.+..|.+||||||
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~-~-~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAG 124 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRI-E-V-FYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAG 124 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGG-G-G-TEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECS
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCc-H-h-hccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEE
Confidence 4677788999999999999999996432 1 1 1123 55666666664 3443 3442 223456678899999999
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 009372 490 DYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 523 (536)
Q Consensus 490 ~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~~~ 523 (536)
|+++. ++|+|+||++||++||++|+..+.....
T Consensus 125 e~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~~~ 157 (181)
T 2e1m_C 125 EHVSL-KHAWIEGAVETAVRAAIAVNEAPVGDTG 157 (181)
T ss_dssp GGGTT-STTSHHHHHHHHHHHHHHHHTCCC----
T ss_pred HHHcC-CccCHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99996 8899999999999999999998765544
No 69
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.22 E-value=8.1e-11 Score=116.07 Aligned_cols=58 Identities=14% Similarity=0.092 Sum_probs=47.9
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcC---CCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~---~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+.+.|.+.+++.|++|+++++|++|..++ ++. +.|++.+| +++||.||+|+|.+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEECCCCcc
Confidence 56788889999999999999999999998741 233 35777776 799999999998876
No 70
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.22 E-value=2.3e-10 Score=113.93 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=39.0
Q ss_pred CcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH-HHhhc
Q 009372 286 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQ 334 (536)
Q Consensus 286 G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~-~l~~l 334 (536)
+.+|++++.|++++..+++.+ .|++.+|++++||.||-|-|.+ .+++.
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~vR~~ 171 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNSKVRKQ 171 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTCHHHHH
T ss_pred cceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCcchHHH
Confidence 457999999999998666654 5889999999999999999885 33443
No 71
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.22 E-value=2.1e-10 Score=118.67 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=48.8
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~---~~g~--~i~ad~VI~a~~~~~ 330 (536)
..++..|.+.+.+.|++|+++++|++|..++++++++|.. .+|+ ++.|+.||+|+|.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 4678889999988999999999999999854677777765 4564 689999999998864
No 72
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.22 E-value=1.5e-10 Score=119.72 Aligned_cols=59 Identities=29% Similarity=0.348 Sum_probs=47.8
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc--CCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~--~g~--~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 46788899999999999999999999987543777777765 564 689999999998653
No 73
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.22 E-value=2.3e-09 Score=107.96 Aligned_cols=63 Identities=22% Similarity=0.203 Sum_probs=47.8
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc---CCc--EEEcCEEEEccCHHH-HhhcCC
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI-LKLQLP 336 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~---~g~--~i~ad~VI~a~~~~~-l~~ll~ 336 (536)
.+.+.|.+.+.+.|++|+++++|++|..+ ++.+++|++. +|+ +++||.||.|+|.+. +++.+.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 45667888888889999999999999874 4555555554 665 799999999999864 344443
No 74
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.21 E-value=3.3e-09 Score=111.27 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=47.1
Q ss_pred cchHHHHHHHHHcCc--EEEeCcceEEEEEcCC--CCEEEEEEc------CC--cEEEcCEEEEccCHH-HHhhcCCC
Q 009372 273 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--GTVKNFLLT------NG--NVIDGDAYVFATPVD-ILKLQLPE 337 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~--~i~~~~~V~~I~~~~~--g~~~~v~~~------~g--~~i~ad~VI~a~~~~-~l~~ll~~ 337 (536)
.+...|.+.+.+.|+ +|+++++|++|+.+++ +..+.|++. +| ++++||.||.|.|.+ .+++.+..
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~ 219 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGR 219 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCC
Confidence 455667888888887 9999999999998643 222345544 46 479999999999885 45666643
No 75
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.20 E-value=2.9e-09 Score=105.28 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=47.4
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEE-cCCc--EEEcCEEEEccCHHH-HhhcCC
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVDI-LKLQLP 336 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~-~~g~--~i~ad~VI~a~~~~~-l~~ll~ 336 (536)
.+...|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ +++||.||.|.|.+. +++.++
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4556678888788999999999999987433333 3666 6886 699999999999853 455554
No 76
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.18 E-value=1.3e-10 Score=119.08 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHH-cCcEEEeCcceEEEEEcCCC------CEEEEEEc---CCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~g------~~~~v~~~---~g~--~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+.+ .|++|++++.|++|..++++ ++.+|.+. +|+ ++.|+.||+|+|.+.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 4677788888888 69999999999999974334 67777765 564 689999999998864
No 77
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.15 E-value=3.5e-10 Score=118.04 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=47.8
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~---~~g~--~i~ad~VI~a~~~~~ 330 (536)
..++..|.+.+.+.|++|++++.|++|.. +++++.+|.+ .+|+ .+.|+.||+|||.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 46888899999889999999999999987 4566767665 4565 489999999998865
No 78
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.14 E-value=9.5e-10 Score=112.71 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=51.2
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+...|.+.+.+.|++++++ +|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 3577888899998899999999 9999998666777778888888899999999999974
No 79
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.13 E-value=3.2e-10 Score=116.39 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=38.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
..++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~ 61 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWY 61 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 3468999999999999999999999999999999999998654
No 80
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.12 E-value=1.7e-11 Score=121.67 Aligned_cols=57 Identities=16% Similarity=0.227 Sum_probs=44.5
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceE---------EEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~---------~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+..+...|.+.+++.|++|+++++|+ +|..+ ++.+ .|++.+| +++||.||+|+|.+.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 56788999999999999999999999 88764 3444 5777777 899999999999985
No 81
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.11 E-value=3.3e-10 Score=115.19 Aligned_cols=62 Identities=11% Similarity=0.088 Sum_probs=47.9
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc---EEEcCEEEEccCHH-HHhhcCC
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVD-ILKLQLP 336 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~---~i~ad~VI~a~~~~-~l~~ll~ 336 (536)
.+...|.+.+.+.|++|+++++|++|+.++++ + .|++.+|+ +++||.||.|.|.+ .+++.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 45566777888889999999999999986554 3 36776664 79999999999885 4556553
No 82
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.11 E-value=2.2e-10 Score=113.67 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=50.7
Q ss_pred ccchHHHHHHHHHc-CcEEEeCcceEEEEEcCCCCEE-EEEEcCCcEEEcCEEEEccCHHH-HhhcCC
Q 009372 272 ERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVDI-LKLQLP 336 (536)
Q Consensus 272 ~~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~g~~~-~v~~~~g~~i~ad~VI~a~~~~~-l~~ll~ 336 (536)
..+.+.|.+.+.+. |++|+++++|++|..++++ ++ .|++.+|++++||.||.|+|.+. +++.+.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 45677788888887 8999999999999985554 32 47888888899999999999853 455553
No 83
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.10 E-value=8.1e-10 Score=114.43 Aligned_cols=58 Identities=10% Similarity=0.067 Sum_probs=48.2
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~---~~g~--~i~ad~VI~a~~~~~ 330 (536)
..++..|.+.+.+.|++|++++.|++|..+ ++++.+|.+ .+|+ .+.|+.||+|||.+.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 468888999988899999999999999874 677777765 3564 689999999998865
No 84
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.10 E-value=5.1e-10 Score=114.58 Aligned_cols=55 Identities=13% Similarity=0.083 Sum_probs=43.3
Q ss_pred HHHHHHHHHcCc--EEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 276 LPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 276 ~~l~~~l~~~G~--~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.|+ +|++++.|+++..++++..+.|++.+|+++.||.||+|+|...
T Consensus 91 ~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 91 EYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 334555556676 8999999999998666445568899998899999999999753
No 85
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.09 E-value=6e-10 Score=113.27 Aligned_cols=62 Identities=11% Similarity=-0.012 Sum_probs=48.4
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc---EEEcCEEEEccCHH-HHhhcCC
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVD-ILKLQLP 336 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~---~i~ad~VI~a~~~~-~l~~ll~ 336 (536)
.+...|.+.+.+.|++|+++++|++|+.++++ + .|++.+|+ +++||.||.|.|.+ .+++.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 45666778888889999999999999986554 3 37777764 79999999999885 3556653
No 86
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.09 E-value=1.8e-10 Score=117.09 Aligned_cols=57 Identities=21% Similarity=0.232 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+...+.+.+++.|++|+++++|++|..++++ + .|++.+|+++.+|.||+|+|...
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENC-Y-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCE-E-EEEECCCcEEEcCEEEEeeCCCc
Confidence 346777888888999999999999999874443 3 58888998899999999998754
No 87
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.09 E-value=7.6e-10 Score=103.95 Aligned_cols=41 Identities=32% Similarity=0.409 Sum_probs=37.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCceEEEecCCccCcee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKI 96 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~-g~~V~vlE~~~~~GG~~ 96 (536)
.++||+|||||++|+++|+.|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 457999999999999999999997 99999999998887643
No 88
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.09 E-value=1.6e-09 Score=107.27 Aligned_cols=61 Identities=23% Similarity=0.287 Sum_probs=45.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc-CceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL-GGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~-GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (536)
..+||+|||||++||++|+.|++.|++|+|+|+++.. .+.. ... ...+...++++++|+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~--------------~g~--~l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFG--------------TGI--VVQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCS--------------CEE--ECCHHHHHHHHHTTCCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc--------------ccc--ccChhHHHHHHHcCCcc
Confidence 4579999999999999999999999999999998653 1111 000 01356678888888764
No 89
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.09 E-value=2.9e-10 Score=109.96 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=48.7
Q ss_pred CCeEEEecCCCCccchHHHHHHHHHc-CcEEEeCcceEEEEEcCCCCEEEEEEcC-----CcEEEcCEEEEccCHH
Q 009372 260 GSKMAFLDGNPPERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVD 329 (536)
Q Consensus 260 g~~~~~~~gg~~~~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~g~~~~v~~~~-----g~~i~ad~VI~a~~~~ 329 (536)
|....++.....-.....+.+.+.+. |++|++++.|++|..+ ++.+..|++.+ ++++.+|.||+|+|..
T Consensus 196 g~~v~~v~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 196 GSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp SSEEEEECSSSSCCSCHHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CCEEEEEEcCCccCCCHHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 44555554332112256677778776 9999999999999874 44555677765 4579999999999874
No 90
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.08 E-value=1.6e-09 Score=111.08 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=48.0
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCE--EEEEEcCCc-EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~--~~v~~~~g~-~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.+++.|++|+++++|++|..++++++ +.|++.+|+ ++.||.||+|+|...
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 35667888889999999999999999987545543 357788887 899999999998753
No 91
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.08 E-value=1.2e-09 Score=112.51 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=50.9
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+...|.+.+.+.|++++.+ .|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 4578888999998899999999 8999998666766678888888899999999999875
No 92
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.08 E-value=5.3e-10 Score=109.98 Aligned_cols=59 Identities=24% Similarity=0.348 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH-HhhcC
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI-LKLQL 335 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~-l~~ll 335 (536)
..+.+.|.+.+.+.|++|+++++|++|.. ++ .|++.+|++++||.||.|+|.+. +++.+
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHHHHh
Confidence 45667788888888999999999999986 44 37788888999999999999853 34444
No 93
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.04 E-value=1.1e-09 Score=112.17 Aligned_cols=63 Identities=14% Similarity=0.107 Sum_probs=47.5
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEE--cCCc--EEEcCEEEEccCHHH-HhhcC
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGN--VIDGDAYVFATPVDI-LKLQL 335 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~--~~g~--~i~ad~VI~a~~~~~-l~~ll 335 (536)
..+...|.+.+++.|++|+++++|++|..+ ++.+.+|++ .+|+ +++||.||.|+|.+. +++.+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 356677888888899999999999999984 555544544 4574 799999999999853 34444
No 94
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.04 E-value=1.4e-09 Score=111.97 Aligned_cols=43 Identities=26% Similarity=0.450 Sum_probs=39.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
+.++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 4568999999999999999999999999999999999998653
No 95
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.04 E-value=6.7e-10 Score=108.26 Aligned_cols=41 Identities=32% Similarity=0.562 Sum_probs=37.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~ 43 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ 43 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 47999999999999999999999999999999999888653
No 96
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.04 E-value=3.5e-09 Score=108.67 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=49.6
Q ss_pred CccchHHHHHHHHH-cCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+...|.+.+++ .|++++++ .|++|..++++.++.|++.+|++++||.||.|+|.+.
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 34677888888888 89999999 5999998666766678888877899999999999974
No 97
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.03 E-value=2.3e-09 Score=110.59 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=51.3
Q ss_pred CccchHHHHHHHHHc-CcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 271 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+...|.+.+++. |++++++ +|++|..++++.++.|++.+|+++.||.||.|+|.+.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 356888899999988 9999999 9999998666777778898898899999999999875
No 98
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.02 E-value=2.5e-09 Score=101.17 Aligned_cols=41 Identities=34% Similarity=0.426 Sum_probs=37.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCceEEEecCCccCcee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~~~GG~~ 96 (536)
.++||+|||||++||++|+.|++. |++|+|+|+...+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 468999999999999999999997 99999999998877644
No 99
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.01 E-value=3.9e-09 Score=109.45 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHHcC-cEEEeCcceEEEEEcCCCCEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~g~~~~v~~---~~g~--~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+.+.| ++|++++.|++|..+ ++++++|.. .+|+ ++.|+.||+|+|.+.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 467788888888888 999999999999974 566666653 4675 689999999998864
No 100
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.01 E-value=1.3e-09 Score=110.74 Aligned_cols=40 Identities=33% Similarity=0.404 Sum_probs=36.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
+..+||+|||||++||++|..|++.|.+|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 4578999999999999999999999999999999887764
No 101
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.00 E-value=2.4e-10 Score=113.87 Aligned_cols=58 Identities=21% Similarity=0.228 Sum_probs=49.5
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.++++|++|++++.|++|.. +++++..|++.+|+++.||.||+|+|...
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 45667788888899999999999999987 45667789999999999999999999653
No 102
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.00 E-value=1.4e-09 Score=109.85 Aligned_cols=57 Identities=14% Similarity=0.186 Sum_probs=47.3
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEE-EcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~-~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.+++.|++|+++++|++|..++++. +.|+ +.+|+ +.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCccc
Confidence 3567788888999999999999999999754554 3577 88886 99999999999754
No 103
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.00 E-value=6.6e-10 Score=110.17 Aligned_cols=57 Identities=18% Similarity=0.232 Sum_probs=49.1
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
..+.+.+.+.++++|++|++++.|++|..+ ++++..|++.+|+++.||.||+|+|..
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 456677888888999999999999999873 566777999999999999999999975
No 104
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.99 E-value=2.9e-09 Score=108.63 Aligned_cols=58 Identities=14% Similarity=-0.009 Sum_probs=47.2
Q ss_pred cchHHHHHHHHH-cCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHh
Q 009372 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILK 332 (536)
Q Consensus 273 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~ 332 (536)
.+...|.+.+++ .|++| +++.|++|.. +++.+.+|.+.+|.++.||.||+|+|.+...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 456677777877 48999 5789999987 4667778999999899999999999986533
No 105
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.99 E-value=1.6e-09 Score=111.05 Aligned_cols=58 Identities=9% Similarity=0.059 Sum_probs=47.1
Q ss_pred cchHHHHHHHHH-cCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHh
Q 009372 273 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILK 332 (536)
Q Consensus 273 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~ 332 (536)
.+...|.+.+++ .|++| +++.|++|.. +++.+++|++.+|.++.||.||+|+|.+...
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 456677788877 58999 6789999987 4566778999899889999999999987533
No 106
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.99 E-value=7.8e-10 Score=113.37 Aligned_cols=42 Identities=36% Similarity=0.520 Sum_probs=38.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 467999999999999999999999999999999999998753
No 107
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.97 E-value=2.4e-09 Score=113.42 Aligned_cols=46 Identities=33% Similarity=0.515 Sum_probs=41.8
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeee
Q 009372 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (536)
Q Consensus 53 ~~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~ 98 (536)
+.+..+||+|||||++||+||+.|+++|++|+|+|+++..||.+..
T Consensus 387 ~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 387 AKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred cccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 3456789999999999999999999999999999999999998754
No 108
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.97 E-value=2.4e-09 Score=104.46 Aligned_cols=41 Identities=22% Similarity=0.283 Sum_probs=37.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL 53 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc
Confidence 46899999999999999999999999999999998887755
No 109
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.96 E-value=3.4e-09 Score=106.89 Aligned_cols=57 Identities=25% Similarity=0.251 Sum_probs=44.4
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc-CCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~-~g~~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+++.|++|+++++| +|..+ ++.+.+|... ++.++.||.||+|+|.+.
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 467788888887789999999999 99874 5666666553 223688999999998864
No 110
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.96 E-value=5.6e-09 Score=98.25 Aligned_cols=41 Identities=34% Similarity=0.430 Sum_probs=37.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCceEEEecCCccCcee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~~~GG~~ 96 (536)
.++||+|||||++||+||+.|++. |++|+|+|++..+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 457999999999999999999998 99999999999887744
No 111
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.95 E-value=4.3e-09 Score=95.58 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=44.6
Q ss_pred cchHHHHHHHHHc-CcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
.+...|.+.+++. |++++ +++|++|..+ ++.+..|++.+|+++.||.||+|+|.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4455677778776 89998 6799999874 4556678888888899999999999854
No 112
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.94 E-value=7.4e-09 Score=98.39 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=33.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
+.+||+|||||+|||+||..|++.|++|+|+|+.. .||
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg 42 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRN 42 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCC
Confidence 46899999999999999999999999999999864 444
No 113
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.94 E-value=5.7e-09 Score=109.31 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=46.7
Q ss_pred ccchHHHHHHHHHc-Cc-EEEeCcceEEEEEcCC--CCEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~-G~-~i~~~~~V~~I~~~~~--g~~~~v~~---~~g~--~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+.+. |+ +|++++.|++|..+++ +++++|.. .+|+ ++.|+.||+|||.+.
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 35677888888887 99 9999999999998533 27777764 4564 689999999998865
No 114
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.93 E-value=5.1e-09 Score=104.06 Aligned_cols=37 Identities=43% Similarity=0.641 Sum_probs=34.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc-eEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~-V~vlE~~~~~G 93 (536)
.+||+|||||++||++|..|++.|.+ |+|+|++...+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 57999999999999999999999999 99999987654
No 115
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.93 E-value=4.2e-09 Score=101.66 Aligned_cols=41 Identities=27% Similarity=0.407 Sum_probs=37.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 35799999999999999999999999999999998887754
No 116
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.92 E-value=3.1e-09 Score=102.35 Aligned_cols=40 Identities=30% Similarity=0.401 Sum_probs=37.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
++||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 5799999999999999999999999999999999888765
No 117
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.91 E-value=6.1e-09 Score=99.89 Aligned_cols=38 Identities=32% Similarity=0.463 Sum_probs=35.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
++||+|||||++||+||+.|++.|++|+|+|++ .||.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~ 52 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQL 52 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCee
Confidence 579999999999999999999999999999997 77765
No 118
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.90 E-value=3e-07 Score=96.58 Aligned_cols=61 Identities=26% Similarity=0.339 Sum_probs=45.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-----CCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLAD-----AGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIN 131 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~-----~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~ 131 (536)
++||+|||||++||++|..|++ .|++|+|+|++....... .+ . ...+...++++++|+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~g------ra-------~---~l~~~tle~l~~lGl~ 71 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNG------QA-------D---GLQCRTLESLKNLGLA 71 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSC------SC-------C---EECHHHHHHHHTTTCH
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCC------ce-------e---EEChHHHHHHHHCCCH
Confidence 5799999999999999999999 999999999975432100 00 0 1234567788888875
Q ss_pred Cc
Q 009372 132 DR 133 (536)
Q Consensus 132 ~~ 133 (536)
..
T Consensus 72 ~~ 73 (665)
T 1pn0_A 72 DK 73 (665)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 119
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.90 E-value=4.3e-09 Score=106.92 Aligned_cols=57 Identities=25% Similarity=0.316 Sum_probs=47.4
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
.+.+.+.+.++++|++|++++.|++|..++++. ..|++.+|+++.+|.||+|+|...
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCc
Confidence 566778888899999999999999998754443 357888888899999999998754
No 120
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.90 E-value=3.5e-09 Score=103.75 Aligned_cols=53 Identities=15% Similarity=-0.036 Sum_probs=41.3
Q ss_pred hHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 275 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 275 ~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+.+.+.+.|++++++++|++|..+++++ .|.+.+| ++.+|+||+|+|.+.
T Consensus 91 ~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 91 AEYLQVVANHYELNIFENTVVTNISADDAYY--TIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECSSSE--EEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHcCCeEEeCCEEEEEEECCCeE--EEEeCCC-EEEeCEEEECCCCCC
Confidence 3445556667899999999999999754443 3777777 699999999999875
No 121
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.90 E-value=8.2e-10 Score=109.63 Aligned_cols=56 Identities=16% Similarity=0.254 Sum_probs=46.7
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
.+.+.+.+.++++|++|++++.|++|..+ +.+..|++.+|+++.||.||+|+|...
T Consensus 186 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 186 RIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 45667788888899999999999999863 344568899999999999999998753
No 122
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.89 E-value=5.8e-09 Score=99.65 Aligned_cols=42 Identities=38% Similarity=0.612 Sum_probs=37.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEE-EecCCccCceeee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARDVLGGKIAA 98 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~v-lE~~~~~GG~~~~ 98 (536)
.++||+|||||++||+||+.|++.|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 677887643
No 123
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.87 E-value=7.9e-09 Score=104.83 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=44.7
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCC---cEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g---~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.+++.|+++++++.|++|..++++ + .+++.++ +++.+|.||+|+|...
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSC-E-EEEEESSSEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 356677888888999999999999999875444 3 3666554 5799999999998754
No 124
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.87 E-value=2.2e-09 Score=108.01 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=46.0
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.+++.|++|+++++|++|... ++.+ .|.+.+| ++.||.||+|+|...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 356677888888899999999999999864 4445 6778777 899999999998754
No 125
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.87 E-value=6e-09 Score=106.75 Aligned_cols=56 Identities=14% Similarity=0.210 Sum_probs=44.8
Q ss_pred cchHHHHHHHHHc-CcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
.+...|.+.+++. |++|+ +..|+.|..+ ++.+.+|.+.+|+++.||.||+|+|.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 4566677777774 89995 5689999873 5667778898998999999999999875
No 126
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.87 E-value=1.2e-08 Score=103.82 Aligned_cols=42 Identities=26% Similarity=0.412 Sum_probs=38.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
.++||+|||||++|++||+.|++.|++|+|+|+++.+||.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 358999999999999999999999999999999999999754
No 127
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.87 E-value=1e-08 Score=102.98 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
.+.+.+.+.+++.|++++++++|++|..++++. ..|++.+|+++.+|.||+|+|...
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCc
Confidence 456777888888999999999999998754443 357888898899999999998753
No 128
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.86 E-value=9.4e-09 Score=107.21 Aligned_cols=59 Identities=12% Similarity=0.141 Sum_probs=47.4
Q ss_pred ccchHHHHHHHHHc--CcEEEeCcceEEEEEcCC--CCEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~--G~~i~~~~~V~~I~~~~~--g~~~~v~~---~~g~--~i~ad~VI~a~~~~~ 330 (536)
..+...|.+.+.+. |++|+.++.|++|..+++ |++++|.. .+|+ .+.|+.||+|||...
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 46778888888887 999999999999988544 47888765 3453 589999999998754
No 129
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.85 E-value=1.1e-08 Score=103.07 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.++++|++++++++|++|..++++ +.+++.+|+++.+|.||+|+|...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCCeEEEcCEEEECcCCCc
Confidence 356677888888899999999999999874333 346777888899999999999864
No 130
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.84 E-value=3.5e-08 Score=97.63 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=35.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
.++||+|||||++||++|+.|++.|++|+|+|+++..+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 457999999999999999999999999999999876554
No 131
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.84 E-value=2.2e-08 Score=87.06 Aligned_cols=51 Identities=20% Similarity=0.193 Sum_probs=40.9
Q ss_pred hHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 275 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 275 ~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
.+.+.+.+++.|++++++ +|++|..++++ ..|++.+| ++.+|.||+|+|..
T Consensus 59 ~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 59 LRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECCC-EEEECEEEECCCCC
Confidence 344666677789999999 99999975444 34778888 89999999999975
No 132
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.83 E-value=2.1e-08 Score=102.20 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcE-EEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~-i~ad~VI~a~~~~~ 330 (536)
.+.+.+.+.++++|+++++++.|++|..++++. ..|++.+|++ +.+|.||+|+|...
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCC
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCc
Confidence 566778888899999999999999998754443 3577888887 99999999998754
No 133
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.83 E-value=2.3e-08 Score=104.19 Aligned_cols=54 Identities=24% Similarity=0.334 Sum_probs=44.5
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
..+.+.+.+.+++.|++|+++++|++|..++ + .|++.+|+++.+|.||+|+|..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENG-A---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-T---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCC-C---EEEECCCCEEEcCEEEEccCCC
Confidence 3566778888889999999999999998532 2 2677888899999999999763
No 134
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.82 E-value=4.2e-09 Score=106.73 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCC-cEEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g-~~i~ad~VI~a~~~~~ 330 (536)
.+.+.+.+.+++.|++|+++++|++|..++++....|++.+| +++.+|.||+|+|...
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 466678888888999999999999998754453345888888 7899999999998643
No 135
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.82 E-value=1e-08 Score=104.09 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=45.6
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcC-------CcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------GNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~-------g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.+++.|++|++++.|++|..++++..+.|++.+ |+++.+|.||+|+|...
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 345667888888999999999999999875555233466654 25799999999998753
No 136
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.81 E-value=5.2e-09 Score=106.68 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=48.4
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHHHhhc
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 334 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~l~~l 334 (536)
.+...+.+.++++|++|+++++|++|..++++ + .|++.+|+++.+|.||+|+|...-..+
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTGAG-V-LVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEEECCSS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-E-EEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 46678888889999999999999999874333 3 477788888999999999998653334
No 137
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.81 E-value=1.9e-08 Score=103.61 Aligned_cols=62 Identities=24% Similarity=0.259 Sum_probs=46.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~~ 133 (536)
.++||+|||||++||++|..|++.|.+|+|+|++...+...+. . ...+...++++++|+...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~------~----------~l~~~~~~~l~~lGl~~~ 86 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV------G----------TIGPRSMELFRRWGVAKQ 86 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC------C----------EECHHHHHHHHHTTCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce------e----------eeCHHHHHHHHHcCChHH
Confidence 3579999999999999999999999999999998765432211 0 113445677888887543
No 138
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.81 E-value=2.7e-09 Score=108.46 Aligned_cols=57 Identities=23% Similarity=0.323 Sum_probs=47.1
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
.+...+.+.++++|++|++++.|++|..++++. ..|++.+|+++.+|.||+|+|...
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCcc
Confidence 456778888899999999999999998754443 358888898899999999998753
No 139
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.81 E-value=3.1e-08 Score=100.54 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=42.3
Q ss_pred HHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 277 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 277 ~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
++.+.++++|++|++++.|++|..+ +.+..|++.+|+++.+|.||+|+|...
T Consensus 262 gle~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 262 EVIQELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 3447788899999999999999853 334457788888999999999999754
No 140
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.80 E-value=2.2e-08 Score=100.97 Aligned_cols=56 Identities=20% Similarity=0.297 Sum_probs=46.3
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc-EEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~-~i~ad~VI~a~~~~~ 330 (536)
.+.+.+.+.+++.|++++++++|++|..++++ ..|++.+|+ ++.+|.||+|+|...
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 45667788888999999999999999875444 458888998 899999999998753
No 141
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.79 E-value=1.4e-08 Score=102.60 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=35.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-----CceEEEecCCccC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAG-----HKPLLLEARDVLG 93 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g-----~~V~vlE~~~~~G 93 (536)
..+||+|||||++||++|..|++.| .+|+|+|+++.+|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 4679999999999999999999999 9999999998876
No 142
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.79 E-value=1.5e-08 Score=101.93 Aligned_cols=43 Identities=37% Similarity=0.400 Sum_probs=39.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecCCccCceeee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIAA 98 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~~~~GG~~~~ 98 (536)
..+||+|||||++||++|+.|++.|. +|+|+|+++.+||.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 45799999999999999999999999 99999999999987643
No 143
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.79 E-value=6.8e-08 Score=97.77 Aligned_cols=56 Identities=20% Similarity=0.314 Sum_probs=46.5
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
..+.+.+.+.+++.|++|+++++|++|.. +++.+. |++.+|+++.+|.||+|+|..
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEE-EEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 34567788888899999999999999987 345543 778888899999999999875
No 144
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.78 E-value=1.5e-08 Score=96.69 Aligned_cols=39 Identities=36% Similarity=0.606 Sum_probs=34.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCCccCcee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~~~GG~~ 96 (536)
++||+|||||++|+++|+.|++.|+ +|+|+|++ .+||.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 3699999999999999999999999 99999994 566654
No 145
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.78 E-value=2.1e-08 Score=96.28 Aligned_cols=41 Identities=44% Similarity=0.626 Sum_probs=36.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
.++||+|||||++|+++|+.|++.|++|+|+|++ .+||.+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccc
Confidence 4679999999999999999999999999999998 6777653
No 146
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.77 E-value=2.6e-08 Score=95.41 Aligned_cols=56 Identities=11% Similarity=0.104 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcC----C--cEEEcCEEEEccCHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPVD 329 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~----g--~~i~ad~VI~a~~~~ 329 (536)
.+.+.+.+.+++.|++|+++++|++|..+ ++.+.+|++.+ | +++.+|.||+|+|..
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 34556777777889999999999999874 44555676654 4 479999999999864
No 147
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.75 E-value=1.8e-08 Score=100.56 Aligned_cols=57 Identities=16% Similarity=0.201 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEc-CCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~-~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
.+.+.+.+.+++.|+++++++.|++|..+ +++.+..|++.+|+++.+|.||+|+|..
T Consensus 192 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 192 PVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 45567788888899999999999999862 2455667888899899999999999875
No 148
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.74 E-value=6.7e-08 Score=92.00 Aligned_cols=52 Identities=15% Similarity=0.209 Sum_probs=39.2
Q ss_pred HHHHHHHcCcEEEeCcceEEEEEcCC-CCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 278 l~~~l~~~G~~i~~~~~V~~I~~~~~-g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
+.+.+.+.|++++++++|++|..+.+ +....|++.+|+++.+|+||+|+|..
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 34444566899999999999976422 22235788888889999999999985
No 149
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.74 E-value=3.6e-08 Score=100.03 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=45.6
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc-----EEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~-----~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.+++.|++|++++.|++|..++++.+ .|++.+++ ++.+|.||+|+|...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccccc
Confidence 34667788888899999999999999987555544 46666653 799999999998743
No 150
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.73 E-value=6.8e-08 Score=95.88 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=43.4
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
..+.+.+.+.+++.|+++++++.|++|+. ++ |++.+|+++.+|.||+|+|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCCCEEeeeEEEECCCCC
Confidence 35667788888899999999999999963 32 677889899999999999864
No 151
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.71 E-value=6.6e-08 Score=97.86 Aligned_cols=43 Identities=37% Similarity=0.465 Sum_probs=39.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
+.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 4578999999999999999999999999999999988888764
No 152
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.70 E-value=7.5e-08 Score=90.98 Aligned_cols=42 Identities=19% Similarity=0.385 Sum_probs=35.5
Q ss_pred CCCCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 009372 477 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 520 (536)
Q Consensus 477 ~~~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~ 520 (536)
.+.+.++|||.+||.+.. +..+..|+..|..||..+...|..
T Consensus 252 ~~~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 252 MKQTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp TCBCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 356778999999998874 368999999999999999988754
No 153
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.70 E-value=6.3e-08 Score=93.22 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=35.0
Q ss_pred CCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009372 479 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 521 (536)
Q Consensus 479 ~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~ 521 (536)
.+..++||.+||..... ......|+.+|..||..|...|..+
T Consensus 284 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 325 (333)
T 1vdc_A 284 QTSVPGVFAAGDVQDKK-YRQAITAAGTGCMAALDAEHYLQEI 325 (333)
T ss_dssp BCSSTTEEECGGGGCSS-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEeeeccCCC-chhHHHHHHhHHHHHHHHHHHHHhc
Confidence 56688999999998763 2468889999999999999988654
No 154
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.70 E-value=6.9e-09 Score=102.09 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.+++.|++|+++++|++|..++++ ..|++.+|+++.+|.||+|+|...
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG--LEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCE--EEEEECCCCEEECCEEEECcCCCc
Confidence 345678888888999999999999999874333 457888898999999999998754
No 155
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.69 E-value=1.3e-07 Score=95.14 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=38.1
Q ss_pred CeEEEECCCHHHHHHHHHHHH---CCCc---eEEEecCCccCceeee
Q 009372 58 LKVVIAGAGLAGLSTAKYLAD---AGHK---PLLLEARDVLGGKIAA 98 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~---~g~~---V~vlE~~~~~GG~~~~ 98 (536)
+||+|||||++||+||..|++ .|.+ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999997653
No 156
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.68 E-value=1.3e-07 Score=91.11 Aligned_cols=52 Identities=21% Similarity=0.205 Sum_probs=38.0
Q ss_pred CCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 009372 479 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAE 531 (536)
Q Consensus 479 ~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~~~~~~~~~~~ 531 (536)
.+..++||.+||.+... ......|+.+|..||..+...|......+.-.|.+
T Consensus 277 ~t~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l~~~~~~~~~~~~~ 328 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWLAEHAATGEADSTD 328 (335)
T ss_dssp BCSSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHHHHHHHCC------
T ss_pred ccCCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHhhcCcCccccCCch
Confidence 56688999999998763 24688899999999999999998776554444443
No 157
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.67 E-value=2.1e-07 Score=96.56 Aligned_cols=57 Identities=19% Similarity=0.377 Sum_probs=45.3
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEc------------------CCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~------------------~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
..+...+.+.+++.|+++++++.|++|..+ .++.+ .+++.+|+++.+|.||+|+|..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCc
Confidence 345667778888899999999999999863 23433 4677888899999999999763
No 158
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.66 E-value=1.5e-07 Score=96.26 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=39.7
Q ss_pred HHHHHHHcCcEEEeCcceEEEEEcCC-CCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 278 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 278 l~~~l~~~G~~i~~~~~V~~I~~~~~-g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
+.+.+.+.|++++++++|++|..+.+ +....|++.+|+++.+|.||+|+|..
T Consensus 273 l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 273 LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 44445567899999999999975322 22245788888889999999999975
No 159
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.66 E-value=6.4e-08 Score=98.15 Aligned_cols=43 Identities=37% Similarity=0.457 Sum_probs=39.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~ 98 (536)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 3579999999999999999999999999999998888887643
No 160
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.66 E-value=1.3e-08 Score=102.34 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=45.3
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.+++.|++|+++++|++|.. +++++..+.+ +|+++.+|.||+|+|...
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCCC
Confidence 34566788888899999999999999986 3455544554 777899999999998754
No 161
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.64 E-value=1.3e-07 Score=95.92 Aligned_cols=42 Identities=36% Similarity=0.452 Sum_probs=38.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 358999999999999999999999999999999888888664
No 162
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.63 E-value=1.4e-07 Score=96.82 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=33.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCceEEEecCC
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~-g~~V~vlE~~~ 90 (536)
+.++|+||||||.||+.+|.+|++. +.+|+|||+..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4579999999999999999999975 78999999976
No 163
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.62 E-value=2e-07 Score=91.33 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=36.2
Q ss_pred HHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 282 l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
+.+.|++++++++|++|..+ ++. |++.+|+++.+|+||+|||..
T Consensus 72 ~~~~~i~~~~~~~V~~id~~--~~~--v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 72 YEKNNIKVITSEFATSIDPN--NKL--VTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHHTTCEEECSCCEEEEETT--TTE--EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECC--CCE--EEECCCCEEECCEEEEecCCC
Confidence 34568999999999999863 333 778899899999999999973
No 164
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.62 E-value=8e-08 Score=97.87 Aligned_cols=57 Identities=11% Similarity=0.006 Sum_probs=47.2
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+...+.+.++++|+++++++.|+++...+++ +.|.+.+++++.+|.|++|+|-..
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~--~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDK--ILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCCe--EEEEEcCCCeEEEEEEEEcccccC
Confidence 356778888999999999999999999975443 347788888999999999998643
No 165
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.61 E-value=4.6e-07 Score=92.59 Aligned_cols=36 Identities=33% Similarity=0.471 Sum_probs=33.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..++||+|||||++|++||..|++.|.+|+|+|+++
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 356899999999999999999999999999999865
No 166
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.59 E-value=2e-08 Score=96.32 Aligned_cols=42 Identities=33% Similarity=0.396 Sum_probs=38.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~--~g~~V~vlE~~~~~GG~~~ 97 (536)
.++||+|||||++||+||++|++ .|++|+|+|+++.+||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 46799999999999999999985 4999999999999999874
No 167
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.56 E-value=6.8e-07 Score=90.73 Aligned_cols=43 Identities=28% Similarity=0.440 Sum_probs=37.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEec--------CCccCceee
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA--------RDVLGGKIA 97 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~--------~~~~GG~~~ 97 (536)
+.++||+|||||++|++||..|++.|.+|+|+|+ ...+||.|.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 54 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCV 54 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeec
Confidence 3568999999999999999999999999999998 445666653
No 168
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.56 E-value=2.6e-07 Score=92.92 Aligned_cols=40 Identities=30% Similarity=0.414 Sum_probs=36.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
++||+|||||++|++||..|++.|++|+|+|++ ..||.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 579999999999999999999999999999997 7788764
No 169
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.55 E-value=1.5e-07 Score=93.98 Aligned_cols=38 Identities=32% Similarity=0.457 Sum_probs=34.7
Q ss_pred CeEEEECCCHHHHHHHHHHHH--CCCceEEEecCCccCce
Q 009372 58 LKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGK 95 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~--~g~~V~vlE~~~~~GG~ 95 (536)
+||+|||||++|++||+.|++ .|++|+|+|+++..++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 599999999999999999999 78999999999876654
No 170
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.54 E-value=3.4e-07 Score=92.41 Aligned_cols=40 Identities=30% Similarity=0.416 Sum_probs=36.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
++||+|||||++|++||..|++.|++|+|+|++ ..||.+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 479999999999999999999999999999997 6777653
No 171
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.53 E-value=4.3e-08 Score=97.13 Aligned_cols=51 Identities=24% Similarity=0.256 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
.+...+.+.++++|++|++++.|++|. + + .|++.+|+++.+|.||+|+|..
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCC
Confidence 456677888889999999999999998 2 3 3778889899999999999875
No 172
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.53 E-value=1.3e-07 Score=95.95 Aligned_cols=57 Identities=25% Similarity=0.274 Sum_probs=46.7
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+...+.+.++++|+++++++.|++|..+ ++. +.|++.+|+++.||.||+|+|...
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~-~~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGK-LLIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCe-EEEEECCCCEEECCEEEECCCCCc
Confidence 346667788888899999999999999863 343 358888998999999999998753
No 173
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.51 E-value=1.8e-07 Score=95.95 Aligned_cols=37 Identities=32% Similarity=0.352 Sum_probs=33.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC-CceEEEecCCc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDV 91 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g-~~V~vlE~~~~ 91 (536)
..++|+||||||.||+++|.+|++.| .+|+|||+...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999997 69999999765
No 174
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.51 E-value=5.8e-07 Score=91.25 Aligned_cols=55 Identities=16% Similarity=0.263 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
.+.+.+.+.+++.|++|++++.|++|.. ++.+..|.+ +|+++.+|.||+|+|...
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 4556778888889999999999999985 344434555 677899999999998753
No 175
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.50 E-value=4.8e-07 Score=92.02 Aligned_cols=62 Identities=13% Similarity=0.036 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHcC-cEEEeCcceEEEEEcCCC-CEEEEEEc--CC-----cEEEcCEEEEccCHHHHhhc
Q 009372 273 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 334 (536)
Q Consensus 273 ~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~g-~~~~v~~~--~g-----~~i~ad~VI~a~~~~~l~~l 334 (536)
.....+.+.+.++| ++|++++.|++|..++++ ++++|++. +| .+++|+.||+|+|.....+|
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~l 292 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 292 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHH
Confidence 34456666666675 999999999999986544 78888874 56 36889999999998754554
No 176
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.49 E-value=1.5e-06 Score=86.67 Aligned_cols=53 Identities=17% Similarity=0.233 Sum_probs=45.0
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.++++|+++++++.|+++.. + .|++.+|+++.+|.||+|+|...
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCEEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEeceec
Confidence 56778899999999999999999999862 2 26788999999999999998643
No 177
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.47 E-value=9.6e-08 Score=91.04 Aligned_cols=41 Identities=34% Similarity=0.613 Sum_probs=36.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
-+|||+|||||+||++||..|++.|++|+|+|+. .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 3699999999999999999999999999999984 6777663
No 178
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.44 E-value=2.8e-07 Score=94.41 Aligned_cols=36 Identities=33% Similarity=0.335 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~-~g~~V~vlE~~~~~ 92 (536)
++|+||||||.+|+.+|.+|++ .+.+|+|||+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 58999999998654
No 179
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.43 E-value=1.1e-06 Score=89.39 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=46.5
Q ss_pred cchHHHHHHHHHcC-cEEEeCcceEEEEEcCCC-CEEEEEEc--CC-----cEEEcCEEEEccCHHHHhhc
Q 009372 273 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 334 (536)
Q Consensus 273 ~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~g-~~~~v~~~--~g-----~~i~ad~VI~a~~~~~l~~l 334 (536)
.....++..+.+.| ++|++++.|++|..++++ ++++|++. +| .+++|+.||+|+|.....+|
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~l 297 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKL 297 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHH
Confidence 34456666666665 999999999999986545 68888875 45 36889999999998754554
No 180
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.43 E-value=4.6e-07 Score=93.12 Aligned_cols=37 Identities=32% Similarity=0.451 Sum_probs=32.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHH-CCCceEEEecCCc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDV 91 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~-~g~~V~vlE~~~~ 91 (536)
.++||+||||||.+|+..|.+|++ .|++|+|||+...
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 358999999999999999999998 5789999999754
No 181
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.42 E-value=5.3e-08 Score=96.43 Aligned_cols=45 Identities=7% Similarity=0.046 Sum_probs=37.4
Q ss_pred HHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCH
Q 009372 282 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 328 (536)
Q Consensus 282 l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~ 328 (536)
++++|+++++++.|+.++.+.++.. |++.+|+++.+|.||+++|.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~~~--v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEAMT--VETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTTTE--EEETTSCEEECSEEEECCCE
T ss_pred HHhcCcEEEeCceEEEEEecccceE--EEcCCCcEEEeeEEEEecCc
Confidence 3457899999999999987655543 88999999999999998864
No 182
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.42 E-value=1.5e-06 Score=88.34 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=33.6
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 53 ~~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
+.++.+||||||+|++||++|..|.+.|...+++|+.+..|+..
T Consensus 35 p~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 35 PQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp CTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 34566899999999999999999999888888888877666543
No 183
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.40 E-value=5.7e-07 Score=91.19 Aligned_cols=56 Identities=20% Similarity=0.263 Sum_probs=43.0
Q ss_pred CccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCc----EEEcCEEEEccCH
Q 009372 271 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPV 328 (536)
Q Consensus 271 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~----~i~ad~VI~a~~~ 328 (536)
...+.+.+.+.|+++|++|++|+.|++|+ +++....+...+|+ +|.||.||.|+|.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 34667778888999999999999999996 34444344455663 6999999999975
No 184
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.40 E-value=1.4e-06 Score=89.47 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=40.2
Q ss_pred HcCcEEEeCcceEEEEEcCCCCEEEEEEcC---Cc--EEEcC-EEEEccCHHHHhhcC
Q 009372 284 SLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGD-AYVFATPVDILKLQL 335 (536)
Q Consensus 284 ~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~---g~--~i~ad-~VI~a~~~~~l~~ll 335 (536)
+.|++|++++.|++|..++++++++|.+.+ |+ ++.|+ .||+|+|..-..+||
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL 278 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLL 278 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhh
Confidence 458999999999999985437788888754 53 68898 899999985435543
No 185
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.36 E-value=2.6e-07 Score=88.05 Aligned_cols=36 Identities=33% Similarity=0.438 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+||+|||||+||++||..|++.|++|+|+|+...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 468999999999999999999999999999998643
No 186
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.35 E-value=2.5e-06 Score=86.36 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=32.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~~~ 92 (536)
++||+|||||++|++||..|++. |.+|+|+|+++..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 57999999999999999999996 8999999997664
No 187
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=1.9e-06 Score=83.80 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..||+|||||++|++||..|++.| +|+|+|+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 359999999999999999999999 9999998754
No 188
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.34 E-value=2.9e-06 Score=85.13 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=32.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--CCceEEEecCCccC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~~~G 93 (536)
+||+|||||++|++||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 5899999999999999999997 89999999986643
No 189
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.31 E-value=2.4e-06 Score=85.39 Aligned_cols=34 Identities=38% Similarity=0.623 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHH---CCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLAD---AGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~---~g~~V~vlE~~~ 90 (536)
++||+|||||++|++||+.|++ .|++|+|+|+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 5799999999999999999999 799999999875
No 190
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.29 E-value=6.5e-07 Score=89.54 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
...+||+|||||++||+||+.|++.|++|+|+|+.+.+||...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 4578999999999999999999999999999999999999753
No 191
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.26 E-value=5.8e-07 Score=85.85 Aligned_cols=41 Identities=41% Similarity=0.646 Sum_probs=36.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
..++||+|||||++|++||+.|++.|++|+|+|+ ..+||.+
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 3468999999999999999999999999999999 4667755
No 192
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.22 E-value=2.8e-06 Score=84.66 Aligned_cols=33 Identities=33% Similarity=0.451 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC--CceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g--~~V~vlE~~~ 90 (536)
++|||||||++|++||..|++.+ .+|+|+|+++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 47999999999999999999865 7899999864
No 193
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.22 E-value=6.4e-07 Score=90.34 Aligned_cols=42 Identities=36% Similarity=0.423 Sum_probs=39.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~ 98 (536)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 579999999999999999999999999999999999998753
No 194
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.20 E-value=8.4e-07 Score=89.61 Aligned_cols=41 Identities=34% Similarity=0.520 Sum_probs=38.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 57999999999999999999999999999999989998764
No 195
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.18 E-value=7.6e-07 Score=90.08 Aligned_cols=42 Identities=29% Similarity=0.430 Sum_probs=38.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 468999999999999999999999999999999988999764
No 196
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.11 E-value=1.9e-06 Score=87.02 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=44.7
Q ss_pred ccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 272 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 272 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
..+.+.+.+.++++|++|+++++|++|..+ ++ ...|++. ++++.+|.||+|+|...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCc
Confidence 356777888889999999999999999864 33 3346665 45899999999999864
No 197
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.11 E-value=2.5e-06 Score=90.68 Aligned_cols=45 Identities=27% Similarity=0.465 Sum_probs=41.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeee
Q 009372 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (536)
Q Consensus 54 ~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~ 98 (536)
.+..+||+|||||++||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 345789999999999999999999999999999999999998754
No 198
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.09 E-value=2e-06 Score=89.43 Aligned_cols=41 Identities=29% Similarity=0.395 Sum_probs=37.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
..+||+|||||++|++||+.|++.|++|+|+|+....||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999988844
No 199
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.08 E-value=2.5e-06 Score=83.63 Aligned_cols=35 Identities=34% Similarity=0.393 Sum_probs=32.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--CCceEEEecCCcc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~~~ 92 (536)
+||+|||||++||++|..|++. |++|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998765
No 200
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.07 E-value=1.9e-06 Score=87.44 Aligned_cols=39 Identities=26% Similarity=0.401 Sum_probs=36.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
++||+|||||++|++||..|++.|++|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 489999999999999999999999999999996 488876
No 201
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=1.8e-06 Score=86.82 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=37.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
.++||+|||||++|++||..|++.|++|+|+|+ +.+||.+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 458999999999999999999999999999999 78888764
No 202
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.05 E-value=6.3e-06 Score=78.40 Aligned_cols=40 Identities=33% Similarity=0.256 Sum_probs=35.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCcee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~ 96 (536)
++||+|||||.+|+.||+.|++.|.+|+|+|++...+...
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 4699999999999999999999999999999987654443
No 203
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.04 E-value=2.6e-06 Score=84.88 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++||+|||||++||++|+.|++.|++|+|+|++.
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3699999999999999999999999999999976
No 204
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.98 E-value=4.2e-05 Score=76.54 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
...+|+|||+|.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 356999999999999999999999999999998643
No 205
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.97 E-value=6.8e-06 Score=86.75 Aligned_cols=44 Identities=32% Similarity=0.515 Sum_probs=40.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 54 ~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
.+..+||+|||||++|++||..|++.|++|+|+|+++.+||...
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 34568999999999999999999999999999999999999864
No 206
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.97 E-value=4.6e-05 Score=77.00 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 36999999999999999999999999999998643
No 207
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.96 E-value=4.4e-05 Score=76.75 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=31.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
.+|+|||||.+|+.+|..|++.|.+|+|+|+.++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 5999999999999999999999999999998644
No 208
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.94 E-value=4.7e-06 Score=83.90 Aligned_cols=56 Identities=18% Similarity=0.171 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc-C--Cc--EEEcCEEEEccCHHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPVDI 330 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~-~--g~--~i~ad~VI~a~~~~~ 330 (536)
.+.+.+.+.+++.|+++++++.|++|..++++ +.|++. + |+ ++.+|.||+|+|...
T Consensus 211 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 211 ETAALLRRALEKEGIRVRTKTKAVGYEKKKDG--LHVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTE--EEEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCE--EEEEEeecCCCceeEEEcCEEEECCCccc
Confidence 45667788888899999999999999874333 346665 6 76 899999999998753
No 209
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.87 E-value=6.7e-05 Score=75.27 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998644
No 210
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.86 E-value=1.3e-05 Score=63.87 Aligned_cols=106 Identities=10% Similarity=0.022 Sum_probs=55.2
Q ss_pred cEEEcCEEEEccCHHHHhhcCCCcchhcHHHHHHhccCCccEEEEEEEeeeccccCcccccccCccccccCCcceeeecc
Q 009372 315 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWVFFNCRFDRKLKNTYDHLLFSRSSLLSVYADM 394 (536)
Q Consensus 315 ~~i~ad~VI~a~~~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (536)
++++||+||+|+|+.+++.+...+.+|....++++++.+.+..|+.+. |+++||++.....+ .
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~--f~~~FW~~~~~~gd---------------~ 66 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLE--FSRRWWEFTEADWK---------------R 66 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEE--ESSCGGGCCHHHHH---------------H
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEE--ECCCCCCCCCcccc---------------c
Confidence 379999999999999999987666678788899999999999998876 88888886321110 0
Q ss_pred ccCcccccCCCccEEEEE-Ee-cchhhccCChHHHHHHHHHHHHHhCCCC
Q 009372 395 SLTCKEYYNPNQSMLELV-FA-PAEEWISCSDSEIIDATMKELAKLFPDE 442 (536)
Q Consensus 395 s~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ee~~~~~~~~L~~~~~~~ 442 (536)
+.. -..++ .++.+. .+ .+..|..++. +-.+.++..|.+++|+.
T Consensus 67 s~~---~~~pg-~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 67 ELD---AIAPG-LYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp HHH---HHSTT-HHHHHHHHCCCSCCCC----------------------
T ss_pred cCC---CCCCe-EEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 000 00011 112222 12 2356767765 56888899999999963
No 211
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.86 E-value=8.9e-06 Score=89.09 Aligned_cols=41 Identities=34% Similarity=0.602 Sum_probs=39.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~ 97 (536)
.+||+|||||++|++||..|++.|++|+|+|+++.+||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57999999999999999999999999999999999999886
No 212
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.82 E-value=1.3e-05 Score=88.32 Aligned_cols=41 Identities=32% Similarity=0.500 Sum_probs=38.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCCccCcee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~~~GG~~ 96 (536)
..+||+|||||++||+||+.|++.|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46799999999999999999999999 799999999999975
No 213
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.81 E-value=0.0001 Score=74.43 Aligned_cols=50 Identities=16% Similarity=0.099 Sum_probs=38.1
Q ss_pred HHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 278 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 278 l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
+.+.+++.|++|+++++|++|..+ +.+..+.+. ++++.+|.||+|+|...
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~-~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN--ERVEAVETD-KGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES--SBEEEEEET-TEEEECSEEEECSCEEE
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEEC-CCEEEcCEEEECcCCCc
Confidence 344556679999999999999863 445456665 44899999999998754
No 214
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.81 E-value=9.3e-06 Score=81.24 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=37.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHH-C------CCceEEEecCCccCceee
Q 009372 57 PLKVVIAGAGLAGLSTAKYLAD-A------GHKPLLLEARDVLGGKIA 97 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~-~------g~~V~vlE~~~~~GG~~~ 97 (536)
.+||+|||||++|++||..|++ . |.+|+|+|+.+.+||.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 4699999999999999999999 7 999999999988998763
No 215
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.80 E-value=1.4e-05 Score=80.11 Aligned_cols=53 Identities=19% Similarity=0.265 Sum_probs=40.6
Q ss_pred cchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 273 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 273 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
.+.+.+.+.+++. +++++++.|++|..+ + .+..+ ..+|+++.+|.||+|+|..
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~~-~-~v~~v-~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEGE-E-RVEKV-VTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEECS-S-SCCEE-EETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEecc-C-cEEEE-EeCCCEEECCEEEEeeCCc
Confidence 4556677778788 999999999999853 2 33334 4567789999999999864
No 216
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.80 E-value=1.2e-05 Score=83.77 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=32.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45789999999999999999999999999999973
No 217
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.80 E-value=0.00016 Score=73.02 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 36899999999999999999999999999998644
No 218
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.78 E-value=1.5e-05 Score=79.91 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=37.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CceEEEecCCccCceee
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKIA 97 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g--~~V~vlE~~~~~GG~~~ 97 (536)
..+||+|||||++|+++|..|++.| .+|+|+|+.+.+||...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4579999999999999999999988 89999999999888753
No 219
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.77 E-value=6.8e-05 Score=75.79 Aligned_cols=50 Identities=14% Similarity=0.097 Sum_probs=38.7
Q ss_pred HHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcC----CcEEEcCEEEEccCHHH
Q 009372 279 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPVDI 330 (536)
Q Consensus 279 ~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~----g~~i~ad~VI~a~~~~~ 330 (536)
.+.+++.|++|++++.|++|..++++ ..|++.+ |+++.+|.||+|+|...
T Consensus 233 ~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 233 QKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred HHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEeccCCCceEEEcCEEEECcCCCc
Confidence 44456678999999999999864333 3466666 76799999999998754
No 220
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=9e-05 Score=74.34 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 45899999999999999999999999999998643
No 221
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.75 E-value=0.00021 Score=71.86 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 35999999999999999999999999999998643
No 222
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.74 E-value=1.9e-05 Score=81.22 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=43.9
Q ss_pred HHHHHHHHH-cCcEEEeCcceEEEEEcCCCCEEEEEEcC---Cc--EE---EcCEEEEccCHHHHhhc
Q 009372 276 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDILKLQ 334 (536)
Q Consensus 276 ~~l~~~l~~-~G~~i~~~~~V~~I~~~~~g~~~~v~~~~---g~--~i---~ad~VI~a~~~~~l~~l 334 (536)
..+.+.+.+ .|++|++++.|++|..+ ++++++|++.+ |+ ++ .++.||+|+|.....+|
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 346666655 48999999999999984 56788888865 63 34 78999999998654554
No 223
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.71 E-value=0.00024 Score=71.49 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 36899999999999999999999999999997543
No 224
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=0.00016 Score=70.20 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 5899999999999999999999999999998643
No 225
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.62 E-value=0.0003 Score=70.75 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=32.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCc
Confidence 45899999999999999999999999999998654
No 226
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.60 E-value=0.00019 Score=72.36 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46999999999999999999999999999998643
No 227
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.59 E-value=2.5e-05 Score=79.93 Aligned_cols=37 Identities=30% Similarity=0.379 Sum_probs=33.7
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..++|+||||||.+|+.+|.+|++ |.+|+|||+....
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 356999999999999999999999 9999999997654
No 228
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.58 E-value=0.00045 Score=69.89 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 46899999999999999999999999999998644
No 229
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.57 E-value=0.00048 Score=69.23 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~~ 91 (536)
...+|+|||||.+|+-+|..|++. |.+|+++++++.
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 356999999999999999999998 889999998754
No 230
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.42 E-value=0.00082 Score=68.70 Aligned_cols=49 Identities=16% Similarity=0.174 Sum_probs=40.7
Q ss_pred hHHHHHHHHHcCcEEEe--CcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHHH
Q 009372 275 CLPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 330 (536)
Q Consensus 275 ~~~l~~~l~~~G~~i~~--~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~~ 330 (536)
...+.+.+.+.+|++.. +++|++|+ .+| |++.+| ++.+|.||+|||..+
T Consensus 341 ~~~y~~al~~~nV~lv~~~~~~I~~it--~~g----v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 341 ETNYYETYNRDNVHLVDIREAPIQEVT--PEG----IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp ESSHHHHTTSTTEEEEETTTSCEEEEE--TTE----EEESSC-EEECSEEEECCCCBS
T ss_pred CccHHHHhcCCCEEEEecCCCCceEEc--cCe----EEeCCC-eeecCEEEECCcccc
Confidence 34577778777899986 89999997 344 788999 999999999999975
No 231
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.30 E-value=0.0016 Score=62.11 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 34689999999999999999999999999998753
No 232
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.28 E-value=0.0024 Score=64.55 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
.+|+|||+|..|+-.|..|++.|.+|+++++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 47999999999999999999999999999863
No 233
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.28 E-value=0.0027 Score=64.76 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=33.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
...+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457999999999999999999999999999998765
No 234
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.25 E-value=0.0018 Score=64.68 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.++
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 45899999999999999999999999999998764
No 235
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.24 E-value=0.0013 Score=63.49 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999998753
No 236
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.22 E-value=0.0002 Score=73.92 Aligned_cols=37 Identities=35% Similarity=0.457 Sum_probs=33.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCceEEEecCCcc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~-~g~~V~vlE~~~~~ 92 (536)
.++|++|||||.+|+++|..|++ .|.+|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 56899999999999999999999 79999999997553
No 237
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.13 E-value=0.0042 Score=63.47 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..++|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457999999999999999999999999999998765
No 238
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.91 E-value=0.0074 Score=62.61 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
.+|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999864
No 239
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.90 E-value=0.0072 Score=61.45 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEec
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~ 88 (536)
.+|+|||+|..|+-.|..|++.|.+|+|+++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~ 241 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVR 241 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEec
Confidence 3699999999999999999999999999986
No 240
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.46 E-value=0.0035 Score=52.18 Aligned_cols=40 Identities=23% Similarity=0.398 Sum_probs=33.2
Q ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 52 PRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 52 ~~~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
+......+|+|||+|..|...|..|.+.|++|++++++..
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3444567999999999999999999999999999998643
No 241
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.42 E-value=0.0045 Score=50.48 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
-+.+|+|||+|-.|...|..|.+.|++|+++|++..
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345899999999999999999999999999998653
No 242
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.27 E-value=0.0045 Score=50.29 Aligned_cols=35 Identities=31% Similarity=0.588 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999753
No 243
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.16 E-value=0.0041 Score=58.59 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 35899999999999999999999999999998654
No 244
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.10 E-value=0.0045 Score=60.24 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=34.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 35899999999999999999999999999999876543
No 245
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.02 E-value=0.0068 Score=49.42 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+.+|+|+|+|..|...|..|.+.|++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999864
No 246
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.73 E-value=0.011 Score=57.39 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=34.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
..+++|||+|.+|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh
Confidence 46899999999999999999999999999999876543
No 247
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.64 E-value=0.011 Score=58.88 Aligned_cols=36 Identities=25% Similarity=0.503 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 358999999999999999999999999999998764
No 248
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.62 E-value=0.012 Score=46.13 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g-~~V~vlE~~~ 90 (536)
.+.|+|+|+|..|...|..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999999999 8999998753
No 249
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.50 E-value=0.011 Score=55.59 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...+|+|||+|..|+-+|..|++.|.+|+|+|+.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccc
Confidence 3468999999999999999999999999999964
No 250
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.48 E-value=0.018 Score=47.70 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..+|+|+|+|-.|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 357999999999999999999999999999986
No 251
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.48 E-value=0.016 Score=56.89 Aligned_cols=38 Identities=29% Similarity=0.387 Sum_probs=34.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
..+|+|||+|.+|+-+|..|++.|.+|+|+|+.+.+..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS 182 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 56999999999999999999999999999999876543
No 252
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.35 E-value=0.017 Score=57.56 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 3589999999999999999999999999999987643
No 253
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.27 E-value=0.02 Score=46.59 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3479999999999999999999999999999753
No 254
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.27 E-value=0.025 Score=55.98 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=44.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCceeeeeccCCCCeeeeceeeeccCcchHHHHHHHhCCCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lg~~~ 132 (536)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++...... .....+.+.+++.|++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~-----------------~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDA-----------------DMNQPILDELDKREIPY 205 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCG-----------------GGGHHHHHHHHHTTCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccc-----------------hhHHHHHHHhhccceEE
Confidence 458999999999999999999999999999998775432211 11234667777777764
No 255
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.19 E-value=0.022 Score=48.76 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~-g~~V~vlE~~~ 90 (536)
...+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 355899999999999999999999 99999999864
No 256
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.18 E-value=0.016 Score=57.39 Aligned_cols=37 Identities=32% Similarity=0.518 Sum_probs=33.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
.++|+|||.|.+|+++|..|+++|++|++.|.+...-
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 3579999999999999999999999999999877643
No 257
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.17 E-value=0.021 Score=57.54 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=34.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
...+|+|||||.+|+-.|..|++.|.+|+|+|+.+.+-
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 230 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL 230 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh
Confidence 34689999999999999999999999999999987653
No 258
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.12 E-value=0.018 Score=57.32 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35689999999999999999999999999999864
No 259
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.10 E-value=0.019 Score=53.59 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...+|+|||||..|...|..++..|++|+|+|..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34589999999999999999999999999999754
No 260
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.09 E-value=0.022 Score=56.86 Aligned_cols=36 Identities=33% Similarity=0.509 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 358999999999999999999999999999988664
No 261
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.90 E-value=0.029 Score=55.48 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 4689999999999999999999999999999977653
No 262
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.89 E-value=0.029 Score=55.09 Aligned_cols=39 Identities=31% Similarity=0.364 Sum_probs=34.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
...+|+|||+|..|+-+|..|.+.|.+|+++|+.+.+-.
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 356899999999999999999999999999999876543
No 263
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.88 E-value=0.029 Score=52.40 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...+|.|||+|..|...|..|++.|++|++++++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3467999999999999999999999999999975
No 264
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.88 E-value=0.02 Score=50.63 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999764
No 265
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.79 E-value=0.025 Score=54.46 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 45899999999999999999999999999998643
No 266
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.70 E-value=0.027 Score=53.57 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=32.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
-++.+|||+|||.+|+.+|..|...|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 456799999999999999999999998 999999874
No 267
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.66 E-value=0.021 Score=52.01 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+.+.|+|||+|-.|+..|..|.+.|.+|+|++.+
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4578999999999999999999999999999865
No 268
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.64 E-value=0.031 Score=49.13 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+...|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4568999999999999999999999999999764
No 269
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.61 E-value=0.035 Score=55.70 Aligned_cols=36 Identities=31% Similarity=0.500 Sum_probs=33.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 458999999999999999999999999999998764
No 270
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.60 E-value=0.038 Score=52.26 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
..++|+|||||..|.+.|..|++.|+ +|+++|.+.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 45799999999999999999999998 999999764
No 271
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.56 E-value=0.035 Score=52.02 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 46999999999999999999999999999997643
No 272
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.55 E-value=0.038 Score=49.46 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=31.1
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+.|+|.|| |..|...|..|+++|++|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4568999998 9999999999999999999998753
No 273
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.52 E-value=0.036 Score=55.39 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
...+|+|||+|.+|+-.|..|++.|.+|+|+++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 3568999999999999999999999999999987653
No 274
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.49 E-value=0.04 Score=53.06 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45699999999999999999999999999999763
No 275
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.49 E-value=0.033 Score=56.22 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 4599999999999999999999999999999987653
No 276
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.36 E-value=0.036 Score=51.90 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 46899999999999999999999999999997644
No 277
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.33 E-value=0.037 Score=52.57 Aligned_cols=34 Identities=32% Similarity=0.601 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
++.+|+|+|||.+|..+|..|...|. +|+|+|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56799999999999999999999998 89999986
No 278
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.32 E-value=0.04 Score=53.83 Aligned_cols=39 Identities=26% Similarity=0.353 Sum_probs=34.6
Q ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 52 PRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 52 ~~~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
|....+.+|.|||.|..||..|..|++.|++|+.+|-+.
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 345578899999999999999999999999999998754
No 279
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.22 E-value=0.041 Score=54.77 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+|+|||+|.+|+-.|..|++.|.+|+|+|+.+.+-
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 185 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh
Confidence 4589999999999999999999999999999887643
No 280
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.18 E-value=0.045 Score=51.63 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|+|||+|.-|.+.|..|++.|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999998754
No 281
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.17 E-value=0.046 Score=51.65 Aligned_cols=35 Identities=20% Similarity=0.124 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHH-HHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~-aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|.|||.|-+|++ +|..|.++|++|++.|.+.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3568999999999997 7888999999999999864
No 282
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.15 E-value=0.045 Score=50.58 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3589999999999999999999999999999753
No 283
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.15 E-value=0.052 Score=53.29 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=34.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~GG 94 (536)
..+|+|||+|..|+-+|..|.+.|.+|+++|+.+.+-.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 46899999999999999999999999999999877543
No 284
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.10 E-value=0.043 Score=52.31 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+..+|+|||+|..|+.+|..|...|.+|+++|++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4569999999999999999999999999999976
No 285
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.09 E-value=0.046 Score=51.31 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|.|||+|.-|.+.|..|++.|++|+++|.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999764
No 286
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.08 E-value=0.058 Score=53.05 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
+..+|.|||+|.-|...|..|++.|++|+++|.+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 446899999999999999999999999999998654
No 287
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.08 E-value=0.042 Score=52.03 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 356899999999999999999999999999998654
No 288
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.00 E-value=0.06 Score=50.46 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=33.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 54 ~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...+++|.|||.|..|...|..|++.|++|++++++.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3456799999999999999999999999999998764
No 289
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.99 E-value=0.053 Score=53.02 Aligned_cols=37 Identities=27% Similarity=0.282 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+|+|||+|.+|+-+|..|.+.|.+|+++|+.+.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 4689999999999999999999999999999987654
No 290
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.98 E-value=0.057 Score=55.51 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 358999999999999999999999999999997754
No 291
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.95 E-value=0.05 Score=54.24 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 46799999999999999999999999999999753
No 292
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.95 E-value=0.062 Score=47.05 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..++|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999988654
No 293
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.94 E-value=0.049 Score=54.87 Aligned_cols=35 Identities=29% Similarity=0.492 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||||.+|+-.|..|++.|.+|+|+|+.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 232 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDT 232 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 45899999999999999999999999999998654
No 294
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.93 E-value=0.049 Score=51.71 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
...+|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 356899999999999999999999999999987643
No 295
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.93 E-value=0.051 Score=55.13 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=31.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
.+++|||||+.|+-.|..+++.|.+|+|+++...+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L 258 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL 258 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc
Confidence 47999999999999999999999999999875443
No 296
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.92 E-value=0.049 Score=51.39 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 46899999999999999999999999999997643
No 297
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.91 E-value=0.046 Score=51.32 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|+|||+|.-|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999998754
No 298
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.88 E-value=0.049 Score=51.20 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
...+|+|||+|.+|+-.|..|++.|.+|+++++.+.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 3468999999999999999999999999999987653
No 299
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.87 E-value=0.062 Score=53.68 Aligned_cols=35 Identities=34% Similarity=0.491 Sum_probs=32.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-.|..|++.|.+|+++|+.++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999998654
No 300
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.85 E-value=0.049 Score=54.09 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc-eEEEecCCcc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVL 92 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~-V~vlE~~~~~ 92 (536)
...+|+|||+|.+|+-.|..|++.|.+ |+|+++.+..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 356899999999999999999999998 9999987643
No 301
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.82 E-value=0.059 Score=50.76 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~~ 90 (536)
.++|+|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999763
No 302
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.82 E-value=0.059 Score=54.04 Aligned_cols=36 Identities=33% Similarity=0.462 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..+|+|||+|.+|+-.|..|++.|.+|+|+++.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 358999999999999999999999999999987664
No 303
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.76 E-value=0.062 Score=49.78 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 379999999999999999999999999998764
No 304
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.73 E-value=0.068 Score=53.15 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=33.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 4689999999999999999999999999999987653
No 305
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.57 E-value=0.08 Score=52.58 Aligned_cols=46 Identities=20% Similarity=0.200 Sum_probs=37.5
Q ss_pred CCCCCCeEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009372 479 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGK 526 (536)
Q Consensus 479 ~~p~~~l~~aG~~~~~~~~~~i~gA~~SG~~aA~~ll~~l~~~~~~~~ 526 (536)
.+..++||.+||.+... ..+..|+..|..||..|...|......++
T Consensus 406 ~Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~~~~~~~~ 451 (456)
T 2vdc_G 406 MTNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAKAKAEAPV 451 (456)
T ss_dssp BCSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Confidence 35578899999987653 57899999999999999999987765543
No 306
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.52 E-value=0.074 Score=50.48 Aligned_cols=33 Identities=30% Similarity=0.285 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
.++|+|||+|..|.+.|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999874
No 307
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.52 E-value=0.067 Score=53.87 Aligned_cols=36 Identities=22% Similarity=0.365 Sum_probs=32.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC---CCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~---g~~V~vlE~~~~~ 92 (536)
..+++|||+|..|+-.|..|++. |.+|+|+|+.+++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 35899999999999999999999 9999999987764
No 308
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.48 E-value=0.059 Score=53.29 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=31.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||+|..|+..|..|++.|++|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999864
No 309
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.46 E-value=0.066 Score=53.08 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CC-ceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADA-GH-KPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~-g~-~V~vlE~~~~ 91 (536)
+.++|.|||+|..|+..|..|++. |+ +|++++.+..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 456899999999999999999999 99 9999998754
No 310
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.45 E-value=0.083 Score=52.91 Aligned_cols=37 Identities=35% Similarity=0.430 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+|+|||+|.+|+-.|..|++.|.+|+++|+.+.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 216 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL 216 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Confidence 4589999999999999999999999999999987643
No 311
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.44 E-value=0.07 Score=50.06 Aligned_cols=33 Identities=30% Similarity=0.489 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+++|.|||+|..|...|..|++.|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 468999999999999999999999999999874
No 312
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.42 E-value=0.065 Score=50.71 Aligned_cols=37 Identities=24% Similarity=0.439 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 3568999999999999999999999999999987654
No 313
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.41 E-value=0.062 Score=49.92 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|+|||+|.-|.+.|..|++.|.+|++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 58999999999999999999999999999886
No 314
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.39 E-value=0.068 Score=49.33 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+.|.|||+|.-|...|..|+ .|++|+++|++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4579999999999999999999 999999999753
No 315
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.39 E-value=0.072 Score=53.56 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC---CCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~---g~~V~vlE~~~~~G 93 (536)
..+++|||+|..|+-.|..|.+. |.+|+|+|+.+++.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 45999999999999999999999 99999999987643
No 316
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.35 E-value=0.29 Score=45.77 Aligned_cols=54 Identities=17% Similarity=0.150 Sum_probs=42.2
Q ss_pred hHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEc---CCc--EEEcCEEEEccCHH
Q 009372 275 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVD 329 (536)
Q Consensus 275 ~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~---~g~--~i~ad~VI~a~~~~ 329 (536)
...+.+.+.+.|++++++++|++|..+ ++++.+|++. +|+ ++.+|.||+|+|..
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 356777888899999999999999873 4445556664 564 68999999999754
No 317
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.25 E-value=0.087 Score=50.31 Aligned_cols=34 Identities=32% Similarity=0.278 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..++|.|||+|.-|.+.|..|++.|++|++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3568999999999999999999999999999875
No 318
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.25 E-value=0.084 Score=51.94 Aligned_cols=36 Identities=19% Similarity=0.488 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
...++.|||.|.-|+..|..|++.|++|++++.+..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999998754
No 319
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.17 E-value=0.097 Score=49.35 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
++|+|||||..|.+.|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999998 999999764
No 320
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.16 E-value=0.075 Score=50.00 Aligned_cols=34 Identities=44% Similarity=0.609 Sum_probs=29.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...++|+|||+|.-|.+.|..|++.|++|+++ ++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 35678999999999999999999999999999 64
No 321
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.10 E-value=0.085 Score=53.56 Aligned_cols=36 Identities=17% Similarity=0.363 Sum_probs=33.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
.+|+|||+|..|+-.|..|++.|.+|+++|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 689999999999999999999999999999987643
No 322
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.09 E-value=0.035 Score=55.12 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..|+|+|+|+|-.|...|..|.+.|++|+|+|.+..
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 457999999999999999999999999999998743
No 323
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.06 E-value=0.075 Score=51.84 Aligned_cols=37 Identities=32% Similarity=0.543 Sum_probs=31.2
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 53 RPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 53 ~~~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
.....++|.|||+|..|+..|..|++ |++|++++.+.
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34456799999999999999999998 99999999764
No 324
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.05 E-value=0.094 Score=54.12 Aligned_cols=37 Identities=22% Similarity=0.418 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 223 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM 223 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 4589999999999999999999999999999877643
No 325
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.04 E-value=0.11 Score=45.73 Aligned_cols=35 Identities=29% Similarity=0.238 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|.|||+|..|...|..|++.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999998753
No 326
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.04 E-value=0.096 Score=51.10 Aligned_cols=36 Identities=31% Similarity=0.446 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
...+|+|||.|-.|...|..|.+.|++|+++|.+..
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345899999999999999999999999999998753
No 327
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.00 E-value=0.11 Score=51.68 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|.|||+|..|...|..|++.|++|+++|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4589999999999999999999999999999764
No 328
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.99 E-value=0.098 Score=50.82 Aligned_cols=34 Identities=32% Similarity=0.496 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...|+|||+|.+|+.+|..|...|.+|++++.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5689999999999999999999999999998753
No 329
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.97 E-value=0.096 Score=48.84 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--ceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~~ 90 (536)
++|+|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 479999999999999999999998 899999753
No 330
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.96 E-value=0.11 Score=48.78 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
.++|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999999998 999999753
No 331
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.95 E-value=0.11 Score=52.42 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=33.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~G 93 (536)
..+++|||+|..|+-.|..|.+.|.+|+++|+.+.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 3589999999999999999999999999999987654
No 332
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.93 E-value=0.072 Score=54.02 Aligned_cols=36 Identities=31% Similarity=0.306 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 356999999999999999999999999999987543
No 333
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.86 E-value=0.1 Score=48.94 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
.++|+|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999998 999999764
No 334
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.85 E-value=0.11 Score=48.11 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999998764
No 335
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.68 E-value=0.096 Score=48.95 Aligned_cols=31 Identities=39% Similarity=0.527 Sum_probs=29.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|+|||+|..|.+.|..|+ .|.+|+++.++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 68999999999999999999 99999999875
No 336
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.67 E-value=0.13 Score=46.34 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|.|||+|.-|.+.|..|++.|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45799999999999999999999999999998764
No 337
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.64 E-value=0.11 Score=48.94 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 356799999999999999999999999999998753
No 338
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.58 E-value=0.05 Score=44.35 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...|+|||+|..|...|..|.+.|.+|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 568999999999999999999999999999875
No 339
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.58 E-value=0.12 Score=48.52 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 46899999999999999999999999999998654
No 340
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.56 E-value=0.093 Score=51.79 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=30.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||+|..|+..|..|++.|++|++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999998753
No 341
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.54 E-value=0.13 Score=49.33 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
++.|+|||||..|..+|+.+.+.|++|+++|.+..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 46899999999999999999999999999997654
No 342
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.53 E-value=0.12 Score=48.13 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999998753
No 343
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.53 E-value=0.12 Score=49.58 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|+|||+|..|...|..|++.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999999999999999999999999999874
No 344
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.51 E-value=0.12 Score=48.96 Aligned_cols=33 Identities=27% Similarity=0.456 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+++|.|||+|.-|.+.|..|++.|++|++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999875
No 345
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.47 E-value=0.11 Score=51.87 Aligned_cols=37 Identities=38% Similarity=0.477 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCceEEEecCCccC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~-g~~V~vlE~~~~~G 93 (536)
..+|+|||+|.+|+-+|..|++. |.+|+++|+.+.+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l 196 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM 196 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc
Confidence 46899999999999999999999 99999999876543
No 346
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.47 E-value=0.13 Score=49.69 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...+|+|||+|.+|+.+|..|...|.+|++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45699999999999999999999999999999753
No 347
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.47 E-value=0.12 Score=48.16 Aligned_cols=35 Identities=34% Similarity=0.448 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-+|..|.+.|.+|+++++.+.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 46899999999999999999999999999997654
No 348
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.32 E-value=0.16 Score=50.91 Aligned_cols=33 Identities=33% Similarity=0.598 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..+++|||+|.+|+-.|..|++.|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 348999999999999999999999999999974
No 349
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.32 E-value=0.15 Score=46.68 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+.+.|+|+|+|-.|.++|+.|++.|.+|+|+.++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999875
No 350
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=92.30 E-value=0.13 Score=51.22 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHH--------------------HCCC-ceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLA--------------------DAGH-KPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~--------------------~~g~-~V~vlE~~~~ 91 (536)
...+|+|||+|.+|+-+|..|+ +.|. +|+|++++..
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 3569999999999999999999 5677 6999998754
No 351
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.27 E-value=0.12 Score=46.68 Aligned_cols=34 Identities=35% Similarity=0.511 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
..+|+|||+|-.|..+|..|++.|. +|+|+|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999998 899999764
No 352
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.22 E-value=0.12 Score=48.10 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 35689999999999999999999999999998753
No 353
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.22 E-value=0.11 Score=48.15 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999998764
No 354
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.19 E-value=0.14 Score=47.80 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--CCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~ 90 (536)
++|+|||+|..|.+.|..|++. |.+|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999985 78999999864
No 355
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.19 E-value=0.16 Score=47.54 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
.++|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999998 999999754
No 356
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.19 E-value=0.15 Score=48.81 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..|+|+|+|.+|+.+|..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999998753
No 357
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.09 E-value=0.14 Score=51.12 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|.|||+|.-|...|..|++.|++|+++|.+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999764
No 358
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.05 E-value=0.16 Score=47.42 Aligned_cols=33 Identities=33% Similarity=0.436 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
..+|+|||+|..|.+.|+.|++.|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4589999999999999999999999 99999986
No 359
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.02 E-value=0.17 Score=50.47 Aligned_cols=36 Identities=25% Similarity=0.395 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..+++|||+|.+|+-.|..|++.|.+|+++|+.+.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 458999999999999999999999999999998754
No 360
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.97 E-value=0.16 Score=44.45 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=29.3
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIG-aGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|+||| +|..|...|..|++.|++|++++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3699999 9999999999999999999999864
No 361
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.96 E-value=0.17 Score=47.25 Aligned_cols=33 Identities=36% Similarity=0.536 Sum_probs=29.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
++|+|||+|..|...|+.|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999996 899999653
No 362
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.95 E-value=0.17 Score=50.73 Aligned_cols=36 Identities=33% Similarity=0.564 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..+|+|||+|.+|+-.|..|++.|.+|+++|+.+.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 458999999999999999999999999999988764
No 363
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.92 E-value=0.12 Score=48.98 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEec
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~ 88 (536)
++|.|||+|..|.+.|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3799999999999999999999999999987
No 364
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.88 E-value=0.19 Score=45.62 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...|+|||+|-+|-++|+.|++.|.+|+|+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999999999999999999999999775
No 365
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.86 E-value=0.12 Score=47.98 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
.++|.|||.|..|...|..|++.|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999987643
No 366
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=91.83 E-value=0.15 Score=48.73 Aligned_cols=40 Identities=28% Similarity=0.432 Sum_probs=34.7
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC---ceEEEecCC-ccCce
Q 009372 56 KPLKVVIAGA-GLAGLSTAKYLADAGH---KPLLLEARD-VLGGK 95 (536)
Q Consensus 56 ~~~dVvIIGa-GiaGl~aA~~L~~~g~---~V~vlE~~~-~~GG~ 95 (536)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4669999999 9999999999999997 999999875 44554
No 367
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.77 E-value=0.12 Score=50.44 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 479999999999999999999 99999998754
No 368
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.77 E-value=0.25 Score=46.11 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999998753
No 369
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.66 E-value=0.19 Score=48.33 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999998753
No 370
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.64 E-value=0.17 Score=47.35 Aligned_cols=33 Identities=33% Similarity=0.369 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
.++|+|||+|..|.+.|+.|+..|. +|+++|.+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999987 89999975
No 371
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.63 E-value=0.25 Score=46.23 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
...+|+|||+|..|.+.|+.|+..|. +|+++|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 45799999999999999999999987 89999974
No 372
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.61 E-value=0.12 Score=45.71 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEE-EecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~v-lE~~ 89 (536)
+++|.|||+|..|.+.|..|++.|++|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 56899999999999999999999999998 6664
No 373
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.60 E-value=0.18 Score=48.07 Aligned_cols=35 Identities=17% Similarity=0.389 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34799999999999999999999999999998753
No 374
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.48 E-value=0.16 Score=50.26 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
.+.|+|||+|-+|...|..|.+.|.+|+|++.+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 468999999999999999999999999999874
No 375
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.44 E-value=0.16 Score=47.85 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 46899999999999999999999999999998654
No 376
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.42 E-value=0.15 Score=46.56 Aligned_cols=34 Identities=26% Similarity=0.189 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+.+.|+|||+|-+|.++|+.|++.|.+|+|+.+.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3468999999999999999999999999999875
No 377
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.42 E-value=0.14 Score=47.24 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--ceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~~ 90 (536)
++|+|||+|..|.+.|+.|++.|+ +|+++|...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999987 899999753
No 378
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.38 E-value=0.2 Score=46.46 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
....|+|||+|-+|.++|+.|++.|. +|+|+.+.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35689999999999999999999998 89999875
No 379
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.36 E-value=0.16 Score=47.71 Aligned_cols=32 Identities=34% Similarity=0.435 Sum_probs=29.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
++|+|||+|..|.+.|..|++.|+ +|+++|.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 479999999999999999999998 99999975
No 380
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.33 E-value=0.26 Score=46.23 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
.++|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999998753
No 381
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.31 E-value=0.18 Score=47.24 Aligned_cols=34 Identities=21% Similarity=0.114 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g-~~V~vlE~~~ 90 (536)
.++|.|||.|..|...|..|++.| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 358999999999999999999999 9999999864
No 382
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.29 E-value=0.23 Score=46.45 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
.++|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999988 999999754
No 383
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.24 E-value=0.46 Score=43.72 Aligned_cols=61 Identities=13% Similarity=0.160 Sum_probs=48.4
Q ss_pred eEEEecCCCCccchHHHHHHHHHcCcEEEeCcceEEEEEcCCCCEEEEEEcCCcEEEcCEEEEccCHH
Q 009372 262 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 329 (536)
Q Consensus 262 ~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~g~~~~v~~~~g~~i~ad~VI~a~~~~ 329 (536)
...++..+ ...+...+.+.+.+.|++++. ++|++|.. ++ .|++.+|+++.+|.||+|+|..
T Consensus 165 ~v~~v~~~-~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 165 ETTFFTNG-IVEPDADQHALLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp EEEEECTT-TCCCCHHHHHHHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEE
T ss_pred cEEEEECC-CCCCCHHHHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCcc
Confidence 55555544 347788899999999999985 89999974 22 4788899899999999999764
No 384
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.21 E-value=0.17 Score=47.24 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=29.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC--CceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g--~~V~vlE~~ 89 (536)
++|+|||+|..|.+.|..|++.| .+|++++++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 57999999999999999999998 689999975
No 385
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.21 E-value=0.17 Score=47.44 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
..++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 46799999999999999999999999 99999985
No 386
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.20 E-value=0.18 Score=46.79 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~~ 90 (536)
..+|+|||||..|...|+.|+..|+ +|+|+|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999988 899999764
No 387
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.06 E-value=0.26 Score=45.33 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++.|+|.|+|..|...+..|.+.|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4589999999999999999999999999998753
No 388
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.04 E-value=0.24 Score=47.74 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
....|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35689999999999999999999999999998753
No 389
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=91.00 E-value=0.2 Score=46.52 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.4
Q ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaG-iaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...+|+|||+| +.|..+|..|...|.+|++++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 56799999999 77999999999999999998764
No 390
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.95 E-value=0.22 Score=52.41 Aligned_cols=34 Identities=32% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|.|||+|.-|...|..|++.|++|+++|.+.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999764
No 391
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.92 E-value=0.077 Score=46.86 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..++|.|||+|..|.+-|..|.+.|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4569999999999999999999999999999874
No 392
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.88 E-value=0.18 Score=47.98 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=29.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...+|+|||+|.+|+-+|..|++.| +|++++++
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 3569999999999999999999998 69999875
No 393
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.81 E-value=0.14 Score=47.99 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=29.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC-----C-CceEEEec
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADA-----G-HKPLLLEA 88 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~-----g-~~V~vlE~ 88 (536)
+++|.|||+|..|...|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999998 9 99999986
No 394
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.80 E-value=0.3 Score=45.86 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=31.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
....+|+|||+|..|.+.|+.|+..|. +|+|+|..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 356799999999999999999999987 89999974
No 395
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.77 E-value=0.23 Score=46.61 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
..+|+|||+|..|.+.|+.|+..|. +|+++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4689999999999999999999887 89999974
No 396
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.75 E-value=0.27 Score=43.01 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=29.3
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|+|+|| |..|...+..|+++|++|+++.++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 47999996 999999999999999999999875
No 397
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.74 E-value=0.19 Score=50.05 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~ 90 (536)
.++|.|||+|..|+..|..|++. |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 89999998753
No 398
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.71 E-value=0.21 Score=46.53 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--ceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~~ 90 (536)
++|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999887 899999754
No 399
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.67 E-value=0.25 Score=45.36 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=29.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|.|||+|..|.+.|..|.+.|++|++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 37999999999999999999999999999864
No 400
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=90.67 E-value=0.2 Score=52.97 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=31.8
Q ss_pred CCCeEEEEC--CCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIG--aGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...+|+||| +|.+|+-+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 456899999 99999999999999999999999864
No 401
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.65 E-value=0.19 Score=46.18 Aligned_cols=35 Identities=34% Similarity=0.489 Sum_probs=31.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
+..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45699999999999999999999997 799999753
No 402
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=90.64 E-value=0.21 Score=50.20 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHH----CCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLAD----AGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~----~g~~V~vlE~~~~~ 92 (536)
..+|+|||||.+|+-+|..|++ .|.+|+++++.+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~ 219 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN 219 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc
Confidence 4689999999999999999987 47899999987543
No 403
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.55 E-value=0.22 Score=49.66 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~--g~~V~vlE~~~ 90 (536)
.++|.|||+|..|+..|..|++. |++|++++.+.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 78999998753
No 404
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=90.54 E-value=0.21 Score=45.62 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
..+.++|||+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998764
No 405
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.54 E-value=0.28 Score=45.98 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
+..+|+|||+|-.|..+|..|+..|. +++|+|...
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 46799999999999999999999998 799998754
No 406
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.40 E-value=0.23 Score=45.12 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=29.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC-CceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAG-HKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g-~~V~vlE~~ 89 (536)
++|.|||+|..|.+.|..|++.| ++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 37999999999999999999999 899999874
No 407
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.38 E-value=0.3 Score=45.36 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
....|+|||+|-.|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45689999999999999999999999999999753
No 408
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.30 E-value=0.3 Score=42.89 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=29.3
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|+|+|| |..|...|..|+++|++|+++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 46999998 999999999999999999999764
No 409
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.26 E-value=0.27 Score=44.30 Aligned_cols=34 Identities=38% Similarity=0.497 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
..+|+|||+|-.|..+|..|+..|. +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5699999999999999999999998 799998753
No 410
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.16 E-value=0.2 Score=48.15 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=29.4
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 59 dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+|.|||+|..|.+.|..|++.|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 411
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.16 E-value=0.27 Score=45.59 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999998753
No 412
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.14 E-value=0.33 Score=44.89 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
....|.|||+|-.|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999753
No 413
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.12 E-value=0.29 Score=48.55 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
.+++|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999865
No 414
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.08 E-value=0.25 Score=45.38 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++.|+|+|||..|...+..|.++|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999998753
No 415
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=90.08 E-value=0.27 Score=48.73 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHC--------------------CC-ceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADA--------------------GH-KPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~--------------------g~-~V~vlE~~~~ 91 (536)
...+|+|||+|.+|+-+|..|++. |. +|+|++++..
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 356899999999999999999974 54 8999998754
No 416
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.07 E-value=0.13 Score=45.76 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=30.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
...+|+|||+|-.|...|..|.+.|+ |+++|++..
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 35589999999999999999999999 999998643
No 417
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.02 E-value=0.24 Score=45.63 Aligned_cols=31 Identities=29% Similarity=0.318 Sum_probs=28.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|.|||+|..|...|..|++ |++|++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 479999999999999999999 9999999875
No 418
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.02 E-value=0.31 Score=44.86 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=30.9
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+++|.|||+ |..|.+.|..|++.|++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 358999999 9999999999999999999998753
No 419
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.02 E-value=0.35 Score=50.80 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+-..|.|||||..|...|+.+++.|++|+++|..+
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 45689999999999999999999999999999764
No 420
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.99 E-value=0.34 Score=44.91 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=30.8
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIG-aGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35799999 99999999999999999999998754
No 421
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.98 E-value=0.25 Score=45.19 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..+.|+|||+|-.|.+.|+.|.+.|.+|++++++
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999875
No 422
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.94 E-value=0.35 Score=44.99 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
..+.++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45689999999999999999999998 89999876
No 423
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.94 E-value=0.33 Score=44.57 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=29.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
++|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 89988864
No 424
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.94 E-value=0.34 Score=45.71 Aligned_cols=34 Identities=26% Similarity=0.254 Sum_probs=29.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 56 KPLKVVIAGA-GLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGa-GiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
...+|+|||+ |..|.++|+.|+..|. +|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 3568999997 9999999999999985 89999964
No 425
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=89.92 E-value=0.31 Score=47.48 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=29.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---ceEEEe
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLE 87 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~---~V~vlE 87 (536)
+..+|+|+|||-+|.++|+.|.+.|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45689999999999999999999997 799998
No 426
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.89 E-value=0.28 Score=45.56 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
.++|.|||+|..|...|..|++.|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999875
No 427
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.86 E-value=0.27 Score=45.62 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=29.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
++|.|||+|..|...|..|++.|++|++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999875
No 428
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.84 E-value=0.26 Score=54.41 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
.+|+|||||.+|+-+|..|.+.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999996 899999876
No 429
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=89.84 E-value=0.19 Score=54.97 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSI 319 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc
Confidence 358999999999999999999999999999988654
No 430
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.81 E-value=0.37 Score=43.33 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
+. .++|||+|-+|-++++.|.+.|. +|+|+.+..
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 44 89999999999999999999998 899998753
No 431
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=89.80 E-value=0.33 Score=44.42 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
....++|||+|-+|-++|+.|++.|. +|+|+.+..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46799999999999999999999998 899997653
No 432
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.75 E-value=0.37 Score=43.86 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
..+.++|+|+|-+|.++|+.|++.|. +|+|+.+.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999996 89999764
No 433
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.72 E-value=0.38 Score=44.14 Aligned_cols=34 Identities=32% Similarity=0.248 Sum_probs=30.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
....++|+|+|-+|.++|+.|++.|. +|+|+.+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 45689999999999999999999998 69999775
No 434
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.66 E-value=0.28 Score=48.84 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
.+++|.|||+|.-|.+.|..|++.|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34589999999999999999999999999998763
No 435
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.66 E-value=0.34 Score=45.32 Aligned_cols=33 Identities=33% Similarity=0.362 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
.++|.|||.|..|.+.|..|++.|+ +|++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 4689999999999999999999999 89999875
No 436
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=89.65 E-value=0.41 Score=48.81 Aligned_cols=38 Identities=39% Similarity=0.593 Sum_probs=34.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
+.++|+||||||++|+++|++|++.|.+|+|||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35789999999999999999999999999999998643
No 437
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.61 E-value=0.29 Score=44.35 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+++|.|||+|..|...|..|.+.|++|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 468999999999999999999999999999864
No 438
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.60 E-value=0.22 Score=47.95 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=30.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC-------CceEEEecCCc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g-------~~V~vlE~~~~ 91 (536)
++|.|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999987643
No 439
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.49 E-value=0.34 Score=45.34 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=30.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
...+|+|||+|..|.+.|+.|+..|. +|+++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 45689999999999999999999887 89999974
No 440
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=89.48 E-value=0.41 Score=45.21 Aligned_cols=34 Identities=29% Similarity=0.260 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...+|.|||.|..|-+.|..|.+.|++|++++++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457999999999999999999999999999875
No 441
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=89.44 E-value=0.29 Score=45.07 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=28.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC--ceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~~ 90 (536)
++|.|||+|-.|.++|+.|..++. +++|+|-.+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 579999999999999999998875 799999653
No 442
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.42 E-value=0.35 Score=45.47 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCC----CceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g----~~V~vlE~~ 89 (536)
..++|.|||+|.-|.+.|..|++.| ++|++++++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 3468999999999999999999999 789999865
No 443
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.40 E-value=0.37 Score=49.02 Aligned_cols=36 Identities=14% Similarity=0.291 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..++|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 457999999999999999999999999999997543
No 444
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=89.39 E-value=0.4 Score=43.88 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
....++|||+|-+|.++|+.|++.|. +|+|+.+.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 45689999999999999999999996 89999775
No 445
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.37 E-value=0.38 Score=47.37 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=31.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+.|+|+|+|-.|..+|..|+..|.+|++.|.+.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45689999999999999999999999999998753
No 446
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.35 E-value=0.29 Score=51.41 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
...+|.|||+|.-|...|..|++.|++|+++|.+.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 34579999999999999999999999999999764
No 447
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.32 E-value=0.29 Score=45.17 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=29.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
.+.++|+|+|-.|.++|+.|++.| +|+++.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 468999999999999999999999 99999765
No 448
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.32 E-value=0.37 Score=50.70 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=33.0
Q ss_pred CCCeEEEEC--CCHHHHHHHHHHHHCCCceEEEecCCcc
Q 009372 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARDVL 92 (536)
Q Consensus 56 ~~~dVvIIG--aGiaGl~aA~~L~~~g~~V~vlE~~~~~ 92 (536)
...+|+||| +|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 456899999 9999999999999999999999987553
No 449
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=89.26 E-value=0.25 Score=49.69 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHC--------------CCceEEEecCCccCc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADA--------------GHKPLLLEARDVLGG 94 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~--------------g~~V~vlE~~~~~GG 94 (536)
..++|||||++|+-.|..|++. ..+|+|+|+.+++-.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~ 268 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN 268 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc
Confidence 4799999999999999998753 358999999887543
No 450
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.25 E-value=0.36 Score=45.33 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=30.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 55 ~~~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
.+.++|+|||+|-.|.+.|+.|+..+. +|+++|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 455799999999999999999998875 78999864
No 451
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.22 E-value=0.38 Score=45.65 Aligned_cols=38 Identities=18% Similarity=0.316 Sum_probs=30.5
Q ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 54 PSKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 54 ~~~~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
....+.|+|.|| |..|...+..|++.|++|+++.+...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 345678999998 99999999999999999999987643
No 452
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.18 E-value=0.23 Score=45.97 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=29.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 3689999999999999999999999999998 53
No 453
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.05 E-value=0.41 Score=47.90 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+|.|||.|.-|...|..|++.|++|+++++..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999998764
No 454
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.00 E-value=0.33 Score=44.00 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCC----CceEEEecCCc
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARDV 91 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g----~~V~vlE~~~~ 91 (536)
.++|.|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 358999999999999999999999 68999987643
No 455
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=88.98 E-value=0.45 Score=40.98 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=30.4
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+.|+|+|| |..|...+..|++.|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 58999998 9999999999999999999998754
No 456
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.95 E-value=0.38 Score=48.06 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=30.6
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||+|..|...|..|++.|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999998753
No 457
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.94 E-value=0.21 Score=47.64 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHCC-------CceEEEecCCc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g-------~~V~vlE~~~~ 91 (536)
++|.|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999998 89999987644
No 458
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.94 E-value=0.44 Score=45.33 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..+.|+|+|+|-.|..+|..|.+.|.+|++.|..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4578999999999999999999999999998853
No 459
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=88.90 E-value=0.41 Score=43.73 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=30.5
Q ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaG-iaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..++|+|||+| +.|..+|..|.+.|..|+++.++
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 56799999999 68999999999999999999643
No 460
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.89 E-value=0.45 Score=42.71 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCC----ceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGH----KPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~----~V~vlE~~~ 90 (536)
++|.|||+|..|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999998753
No 461
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=88.86 E-value=0.48 Score=43.99 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
....++|+|+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45789999999999999999999998 79999775
No 462
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=88.85 E-value=0.22 Score=48.53 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=28.1
Q ss_pred CeEEEECCCHHHHHHHHHHHH-CCCceEEEe
Q 009372 58 LKVVIAGAGLAGLSTAKYLAD-AGHKPLLLE 87 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~-~g~~V~vlE 87 (536)
++|+|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 499999998
No 463
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=88.80 E-value=0.37 Score=46.55 Aligned_cols=36 Identities=19% Similarity=0.433 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---ceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~---~V~vlE~~~~ 91 (536)
.+.+|||.|||.+|+.+|..|.+.|. +|.++|+...
T Consensus 218 ~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 218 HECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred hhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 45689999999999999999999997 7999998743
No 464
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=88.77 E-value=0.37 Score=48.05 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998753
No 465
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.72 E-value=0.38 Score=42.39 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.9
Q ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
++.|+|+|| |..|...+..|++.|++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 468999995 9999999999999999999998863
No 466
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=88.70 E-value=0.51 Score=43.65 Aligned_cols=32 Identities=25% Similarity=0.605 Sum_probs=29.5
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEecC
Q 009372 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 58 ~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
|+|+|.|| |..|...+..|.++|++|+++-++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57999998 999999999999999999999664
No 467
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.65 E-value=0.44 Score=44.55 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=29.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
...+|+|||+|..|.+.|+.|+..|. +|+++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999998775 79999975
No 468
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.60 E-value=0.49 Score=42.93 Aligned_cols=31 Identities=29% Similarity=0.349 Sum_probs=29.2
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEecC
Q 009372 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 59 dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+|+|||+|-.|.+.|..|.+.|.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 469
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.60 E-value=0.38 Score=44.93 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.5
Q ss_pred CeEEEECC-CHHHHHHHHHHHHCC--CceEEEecCC
Q 009372 58 LKVVIAGA-GLAGLSTAKYLADAG--HKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIGa-GiaGl~aA~~L~~~g--~~V~vlE~~~ 90 (536)
++|+|||| |..|.+.|+.|++.| .+|+++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999888 5899999865
No 470
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=88.54 E-value=0.49 Score=43.26 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=30.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..++|+|||+ |+.|..+|..|.+.|..|+++.++
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5679999995 579999999999999999999863
No 471
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.52 E-value=0.41 Score=44.82 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
.++|+|||+|-.|.+.|+.|+..|. .|+++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4699999999999999999998875 79999864
No 472
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.52 E-value=0.32 Score=47.49 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
-+.-|||.|.-|+..|..|++.|++|++++.+..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3788999999999999999999999999998653
No 473
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=88.47 E-value=0.32 Score=48.81 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHH-HHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~-aA~~L~~~g~~V~vlE~~~ 90 (536)
..++|.|||.|-+|++ +|..|.+.|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 4568999999999997 6999999999999999754
No 474
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.42 E-value=0.4 Score=45.55 Aligned_cols=34 Identities=32% Similarity=0.436 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
..+|+|||+|-.|..+|..|+..|. +++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 5699999999999999999999998 799999753
No 475
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.40 E-value=0.35 Score=43.92 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc-eEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~-V~vlE~~~ 90 (536)
.++|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999998 88998753
No 476
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.37 E-value=0.56 Score=43.02 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=30.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---ceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~---~V~vlE~~~ 90 (536)
.++|.|||+|.-|.+.|..|.+.|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3689999999999999999999998 899998753
No 477
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.33 E-value=0.38 Score=43.62 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=28.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEec
Q 009372 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (536)
Q Consensus 58 ~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~ 88 (536)
++|.|||+|..|...|..|++.|++|+++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 3799999999999999999999999998755
No 478
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=88.28 E-value=0.54 Score=44.24 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=31.2
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
..+.|+|.|| |..|...|..|++.|++|+++.+..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4568999998 9999999999999999999998753
No 479
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=88.27 E-value=0.49 Score=42.63 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=29.9
Q ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCceEEEec
Q 009372 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEA 88 (536)
Q Consensus 56 ~~~dVvIIGaG-iaGl~aA~~L~~~g~~V~vlE~ 88 (536)
..++|+|||+| +.|..+|..|.+.|..|+++.+
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~ 182 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS 182 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 56799999976 7999999999999999999975
No 480
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.10 E-value=0.53 Score=44.50 Aligned_cols=34 Identities=29% Similarity=0.236 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
.+.|.|||+|..|.+.|..|++.|++|++.+++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3579999999999999999999999999998764
No 481
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.09 E-value=0.42 Score=44.72 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=29.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--ceEEEecC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~--~V~vlE~~ 89 (536)
+.++|+|||+|-.|.+.|+.|+..+. +|+++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34799999999999999999998876 79999864
No 482
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=87.99 E-value=0.49 Score=45.69 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
....|+|||.|..|..+|..|...|.+|++.|.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45699999999999999999999999999999754
No 483
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.97 E-value=0.59 Score=43.03 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=30.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIG-aGiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
+.+.++|+| +|-.|.++|..|++.|.+|+++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 346899999 9999999999999999999999875
No 484
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=87.93 E-value=0.52 Score=42.87 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 57 ~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
...|+|||+|-+|-++|+.|++.|. +|+|+.+.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999997 79999764
No 485
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=87.83 E-value=0.52 Score=42.74 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=29.9
Q ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCceEEEec
Q 009372 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEA 88 (536)
Q Consensus 56 ~~~dVvIIGaG-iaGl~aA~~L~~~g~~V~vlE~ 88 (536)
..++|+|||+| +.|..+|..|.+.|..|+++.+
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs 191 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR 191 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 56799999999 6799999999999999999964
No 486
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=87.66 E-value=0.5 Score=47.70 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
...+|+|||+|-.|..+|..|+..|. +++|+|...
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 35799999999999999999999998 799998753
No 487
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.60 E-value=0.55 Score=47.52 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~~ 91 (536)
+..+|+|||+|-.|..+|..|+..|. +++|+|....
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 45799999999999999999999998 7999997543
No 488
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=87.08 E-value=0.71 Score=43.04 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=31.8
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
.++.|+|.|| |..|...+..|++.|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999987644
No 489
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.07 E-value=0.54 Score=41.13 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=30.0
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 58 ~dVvIIG-aGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+.|+|+| +|..|...+..|++.|++|+++.++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 3799999 79999999999999999999998864
No 490
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=87.04 E-value=0.95 Score=42.60 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.2
Q ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCceEEEecC
Q 009372 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 55 ~~~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
...+.|+|.|| |..|...+..|++.|++|+++.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34568999998 999999999999999999998764
No 491
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=87.02 E-value=0.64 Score=42.14 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=30.0
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCceEEEecC
Q 009372 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (536)
Q Consensus 56 ~~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~~ 89 (536)
..++++|||+ |+.|..+|..|++.|..|++..++
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5679999995 568999999999999999999754
No 492
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.01 E-value=0.77 Score=40.19 Aligned_cols=32 Identities=19% Similarity=0.103 Sum_probs=28.6
Q ss_pred eEEEECC-CHHHHHHHHHHH-HCCCceEEEecCC
Q 009372 59 KVVIAGA-GLAGLSTAKYLA-DAGHKPLLLEARD 90 (536)
Q Consensus 59 dVvIIGa-GiaGl~aA~~L~-~~g~~V~vlE~~~ 90 (536)
.|+|+|| |-.|...|..|+ +.|++|+++.++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 4999995 999999999999 8999999998753
No 493
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=86.96 E-value=0.42 Score=44.98 Aligned_cols=41 Identities=22% Similarity=0.386 Sum_probs=31.3
Q ss_pred CCCCCCeEEecccccC-----CCCCchhHHHHHHHHHHHHHHHHHH
Q 009372 479 RSPVEGFYLAGDYTKQ-----KYLASMEGAVLSGKLCAQAIVQDYV 519 (536)
Q Consensus 479 ~~p~~~l~~aG~~~~~-----~~~~~i~gA~~SG~~aA~~ll~~l~ 519 (536)
.+.+++||.|||.... +...++-+++.||++||+.|++.|.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 4668899999997642 1012566788999999999999875
No 494
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.94 E-value=0.65 Score=46.08 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=31.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
....|+|||.|..|..+|..|...|.+|+++|...
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999753
No 495
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.94 E-value=0.55 Score=45.66 Aligned_cols=35 Identities=31% Similarity=0.388 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-ceEEEecCC
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~~ 90 (536)
....|+|||+|-.|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998753
No 496
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=86.91 E-value=0.71 Score=41.81 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=29.6
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCceEEEec
Q 009372 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEA 88 (536)
Q Consensus 56 ~~~dVvIIGa-GiaGl~aA~~L~~~g~~V~vlE~ 88 (536)
..++|+|||. |+.|..+|..|++.|..|++..+
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs 193 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHR 193 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence 5679999995 67999999999999999999865
No 497
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.85 E-value=0.73 Score=43.43 Aligned_cols=36 Identities=19% Similarity=0.117 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCceEEEecCCc
Q 009372 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (536)
Q Consensus 56 ~~~dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~~ 91 (536)
..+.|.|||.|..|...|..|+..|.+|+++++...
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 456899999999999999999999999999987643
No 498
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=86.79 E-value=0.46 Score=44.66 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=29.9
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCC--CceEEEecCC
Q 009372 56 KPLKVVIAG-AGLAGLSTAKYLADAG--HKPLLLEARD 90 (536)
Q Consensus 56 ~~~dVvIIG-aGiaGl~aA~~L~~~g--~~V~vlE~~~ 90 (536)
..++|+||| +|..|.+.|+.|++.| .+|+++|...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 346899999 7999999999999988 6899998654
No 499
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=86.78 E-value=0.47 Score=43.91 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=27.5
Q ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEecCC
Q 009372 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (536)
Q Consensus 59 dVvIIGaGiaGl~aA~~L~~~g~~V~vlE~~~ 90 (536)
+|.+||-|.-|...|..|++.|++|+++++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 69999999999999999999999999998754
No 500
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=86.78 E-value=0.56 Score=43.62 Aligned_cols=31 Identities=35% Similarity=0.473 Sum_probs=28.1
Q ss_pred eEEEECCCHHHHHHHHHHHHCCC-ceEEEecC
Q 009372 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (536)
Q Consensus 59 dVvIIGaGiaGl~aA~~L~~~g~-~V~vlE~~ 89 (536)
+|+|||||..|.+.|+.|+..|+ +|+++|..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 48999999999999999998888 69999975
Done!